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Tomato locus divaricata
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Registry name: | None | [Associate registry name] |
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Image | Description | Type |
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![]() ![]() | [Associate accession] |
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![]() ![]() | [Associate new locus] |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>Solyc03g119060.2 SL2.50ch03:67772406..67778070
AAAAACCTTGCCCTGTTGTAGAAATTACTGTGTGTTACTTGAATTTTGTAGCTTGATGTATCATTGATTTTGATAATTTGTTGGCTTGTGGGCGTACGTAGGAAGCTGATGCAGGCTTTGCTTATTGGCATGTGGGCGGACGCACAAAAGCTGATGCTGCCTTAGCTTATTTTTCAACTACTTCTTGTGGAGGTAATTTGTTATGCAATTTATTACTAACGACTACTTTTTTTAACAAAATTGCAGTGTTCGGGTCAACTTAATTTAGCCGTACAAATACTTGCTATTTAATTTCCACTAGCACATGTACAAACTTAATTCAGACCACCAAAGTTTGGACGTATACGATGAAATTCGTAGCGTTTTGTCAACGGGTAACCTCATAGTTCATCCTATTTGGTTGAGTGCATTTATTGCTGACCACGAGGTTGTTTCTCTGGTGGACAAAACGAGGGAAGCGAGATTGAAGATGGTTTAGAAATGTGAAAAGGAGATGCGTTGACGCGTCAGTGACGATGTGTGAGAAGTTGGGTATAGGGGTATGGGGAGATGCATAGGTAGGTGGAATAAGTATTGAGAAGAGGTGATAAGGACAAAATATGATGTAACTTCAGGTTATGGAGGACATGATATAGGGAAAAAAGGTTAATAGGTTTGTAATGTTGTTTTGCTTAGGTGGTATGTACTAATTGTTTTATTATATTTCTTATTTTTTTAAAAAATAATTCATTATTTATTATGTTTTCAATAATCTAATTCTTGTATATTGTTTACTGTGTTTCAATTATCACACTATTTTATTGTTGTTCTTGGCTTTTTTGGGTAGACTTTGTGATGTATTACGTTGTTACTTGCTATATTCTCTTTAGTGTCTCTTTTTCACTTGAGTCGAGGGTACCTTTCTACCTTCCATGAGGTAGTTCTAAGGTTTATGTGTATTCTACCCACCATGGACCTCATTGTGGGATTTCGGTGGTATGTTATTGTTTTGGTTCCATCACTTATAGTATTTTCTTTCTTTAACTCGAAAGGAGTTTGATTTGTTGGAGAAATTTTGTTACTGTTTTGTTTAGGAAGGGGAGTGGGGGAGGCGATATGCGAATTCAAAATTTGAACTTTAGGTAGAGTGTGAGTCAAAGTTAGTTCGGATGATCCCATAAATTGTATACGAGGTCCACATTGGAGGGCTTTCCGAAAATGGAAGGACATAAATATATATGAGTGTGATGGTTTGACTAGATGTTGGTATTTTTCTTTAAGATCATTCTTTTATGGATACTCAACTACTCTGAATATGAAACGTTACAGATGTTAATGTTCTGGATTAGTCTATGACTATTATTCAAACGAAAGCTACCGTTGGATGTTTACTGCTAATCCTCATCAATTAATGAACTAAACATGTTCTGTTGAAATGAAACCTAACTGGAGTAGTAGTTGTCAAGCTCATTAAAAGATCCACTATACACAAGCTACTGGACACTTCTCCTTAATTCCTGTCATATATAATATAAAATGAGTTAAAACGGTAAAAAACACATCTAAACTATTCGACTTTATTGAGTTTCACATCTGAACTATTCGGAGTGTGAGTTTCACTCAATAGTTCAGGTATGAAACTCAAATAATTTGGACATTTTAGATGTCTTTTTGACCGTTAACTCATAAAATAATGATAAATGGGAGACAGTTGAATGCTTCAATCTTGATTGGGCCAACTGATAAGAGCAATTGAATGTCATGAAACAGGACAAATTTGCACAGATTCAACGCTTATAAAATGCTGTATATCTTCCTTTTCAATCTTCATAACTGATAACACATCTCTTGAATCCTTTTGACTTTATTTGACAGGTCAACTGTTGAGAAACTCTCATGGCATTCTCAATTTCTCTTCCAGACTTTGTTCATCCTCAACTCCGGCATGTTGTTGCAAAGATGTCTTTCTTTGACACAATTTTGTTCTATGTTAGTGTCCTCCGTTCCCTTCTTTTAACCGTTCACCTGTGTGATAGTATGCTTTAGTACACACTAGAATGTTTTTTTTTTCTTTCTAATGCTACTGTTTTTTATGTATCAGGTTGTACATCTTGTGGACAAGTTTGACTTATGGCATAGATTGCCGGTGTTACTGGGGGCAGCTTACCTAGGAATAAGAAGACACTTGCACCAGCGATACAATCTTTTACATGTAGGGAAAGTTAATGGCAAGAAATATGACACAGAAGAGTTTACCTATCGGACTGCTGATGGTTCATGCAATCATCCTGTGGATCATTTAGTGGGCAGTCAAGGAACCTTCTTTGGCCGCAACATGCTACCATCCACTTCAAGTTATGCGGTAAGCCAAAATGCAATCAATTATGCTACACTAATTAAATCATATAAATTTGATAGTTTCAATTTTACAAGACATTTCAGTTTTCTGTTGAACGTGTGATGCTGATCTTTTTAGATAGCTAACTTTCATGGTCCAATAAATGTGTCTTAATCATATAGCTGTTTGAAATATGTATCTTGAGACCTCTCAATGATCACTTGTGACAATATCATTTGATTATGCAGCTGCTGGAACCTCACCCTGTAACAGTGGCCTCCAAGCTCTTGGAAAGAAGAAAATACACAGATTGTGGGGGCCAATTCAACATGATAGCGTGCGCGTGGTTACAATTTATGATCCATGATTGGAATGACCATATGGAGGACACTGAACAGGTACCTAGTAAATATGTGTTTTAAAAACTGGAGGGGATTGAAAGGTCAAAAGTGGCCCATATGCACTTAAAGGTGTGTTTTATGTTTCACTAACACAAATTTTTCAACAGGTGGAGCTTAGAGCTCCTCAAGACGTTGCAGCAGGGTGTCCGTTGAAGTCATTTAAGTTCCTTAAAACCAAAAAACTTCCCACAGGTTCACCTGATCTGAAGTTTGGGCATTTGAATTCAAGGACCCCATGGTGGTAAGTAGTGGACTCAAAAACTCTAAACAATTGTGATTTTGTTTGTACTTCTATTTACTCCAAAGCCAGCAATAAAACTAAATATCTTTATGGTCATGGGGAGAGCTAATAGTATAGGACGATAGTTGAAAATACTTAACTGTTTAACTGAAATATTTATTAGGTAAAGAGAGAGTATTTGGTTTACCTCGACTCTTTTCACTCTACCAAACTACTGCTTTGTAGCATGCTAAAAGAGTCAAGGTAATAACCACGCGACAGACCTGGAGGGCAGAAGGGGAGGCGGAAATATTATTCCTAGTTGATGTATACACACGTCAACTCCTGTCCACACTATCCAGTTGGAACTCAATTCGATCCTTCATTTCAATGCAGACTGAAAGTTATTTGAATGGTGAAGATTTATTTCATCTTATGAATTAATATATGCTCTTGCTATTTTGTTAGGGATGGGAGTGTAATATATGGAAACAACGAAGAGGGAATGATAAGGGTGAGAAGATTTAAAGATGGAAAGCTCAGGCTCTCAGGTGATGGACTTCTGGAACATGATGATAAAGGCATTCCAATATCTGGAGATGTCCGAAACTATTGGGCAGGCTACTCTCTCTTGCAGGCCTTGTTTGTGAAGGAACATAATGCCATATGTGATATGCTTAAAGTAGGTTAATGAAGTACCCAGGTTTCTCTTTTCTATGGTCATATGAAGTTTACGTAGTATAGTTAGGACATCGTGAAAGAAGCAAATGAGCATGTATTATGACATTTGATTATTTTACACCTCAAACTGACTTTGCTTAAAATCCTGTTTTGTACCTCTCAGGAACATTACCCTGAATTTGATGATGAAAAGGTTTACCGACATGCAAGACTGATAACTTCAGCGGTCATTGCAAAAATCCATACTATTGATTGGACGCTTGAAATTGTTAAGACTGATACTCTTATGGCAGGAATGAGAATCAACTGGTAAGAGTACTTGATAAAAAATCTATGTTGCCAGATCCTTCAAAAATGTCATTGCACCTGTGCCGAATCACCTAAAAGTGATGCATTTATGGATGATTTGACACGGGTGTTGAGCAGATATAAACTAGAACTGTGATTGAATTAACGGTAGCTCCCAATTTTCAGTTAGTCGTCATGCATGATGCTTTTGCATTACGAGTTTAACTAATAATGTTAACTAAAAGAGTCTAGTGCTATTCAGGTATGGCTTGTTGGGGAAGAGAGTCAAGGATTTGTTAGGACCCAAATTTGGACCAGTATTGAGTGGCTTAGTTGGTCTTAAAAAGCCTAGAGATCACGGAACTCCCTACTCATTGACTGAAGAGTTCGTTAGCGTCTACAGAATGCACTCACTTTTACCTGACACGATTGTTCTGAGGGACCTGAAGTCGACTACATCAGAAGACAAATCCTTGCCTATTCAAGATGAGTACGTTATCCAATTACACATTATAAGCAAATTATGCCTCCTTATATGTCATAACTTGTAGGATATATGTATTTCTAACTGTTTAGTTTGATAATCAGGATTCCTATGAGGGAAATGATAGGGAAAGAAGGAGAAAAGAACTTGTCGAAAATCGGTATGGAGCAGATGCTAGTATCGATGGGTCACCAGTCATCTGGAGCTGGTACATTGTGGAATTTTCCATCATGGATGAGGAACCTTGTTCCTCATGATATCGATGGAGATGATAGACCTGATTCAATTGACATGGCCGCCTTGGACAGTATGTTTATCCCAGTGGACTTCTTTTGTATATTGTTTTCATCTTATACACATGCTAACTTTCTAAATGAACAGTTTATAGAGACAGAGAGAGGGGAGTTCCGCGGTACAATGAGTTCAGAAGGAATTTGCTGATGGTACCAATTAGCAAGTGGGAGGATTTAACTAACGACGAAGAAGTAATTGAGGCTTTACAAGAAGTATATGGCGATGATATTGAGAAGCTAGATCTCCAAATTGGTTTGCACGCGGAGAAGAAAATTAAAGGCTTTGCCATTAGTGAGACTGCCTTTTTTATATTTCTGCTCATTGCTTCAAGGTATGTCAATATAATAACGTTGTACAGAACTTAAACTCTATGCAAAACGTTTGACTACATTTATTTTTTTCCCAGGAGGTTAGAGGCTGATCGATTCTTCACAACTGATTTCAATTCGCGAACCTACACAGAGAAAGGCTTTGAATGGGTAAACAAGACAGAGACATTGAAAGATGTCATCGATCGATACTTCCCTGAAATGACAGAGAAATACATGAGATGCACAAGTGCATTCTCAGTGTGGAGTTCAGATCCAGATCCTAAACACTACTTACCTCTTTATCTGAGACCAGCAACCTAATGGTAGTACTATATTTGGTGATCAACTTTGTATGGGGTGATTATGTTAAAACAATGGTAAGTTTGCAAGGAAAATACAAACAACCCTAGTTTACGGTCAGATGAATAAACCTTGTATGAGAGGTGGCTTGAATGCGTTAACTATGGTGGAGTTTATGATATGTAGTTTTGTAGCGTGACTGTTGTATTAGAGTATGTGATGTCAATTATAGATATAATATGCAAGTGTTTTTTAAGACTATTTGTTTCCTCATTATGTTATGTTAAACTCTAAGATTAGTTTGTTTAAGGAAGCTTAACTTGTGTTAAATTTTATTTGCACCCAATATTTATATGTCAAGCAAGTCAT
AAAAACCTTGCCCTGTTGTAGAAATTACTGTGTGTTACTTGAATTTTGTAGCTTGATGTATCATTGATTTTGATAATTTGTTGGCTTGTGGGCGTACGTAGGAAGCTGATGCAGGCTTTGCTTATTGGCATGTGGGCGGACGCACAAAAGCTGATGCTGCCTTAGCTTATTTTTCAACTACTTCTTGTGGAGGTAATTTGTTATGCAATTTATTACTAACGACTACTTTTTTTAACAAAATTGCAGTGTTCGGGTCAACTTAATTTAGCCGTACAAATACTTGCTATTTAATTTCCACTAGCACATGTACAAACTTAATTCAGACCACCAAAGTTTGGACGTATACGATGAAATTCGTAGCGTTTTGTCAACGGGTAACCTCATAGTTCATCCTATTTGGTTGAGTGCATTTATTGCTGACCACGAGGTTGTTTCTCTGGTGGACAAAACGAGGGAAGCGAGATTGAAGATGGTTTAGAAATGTGAAAAGGAGATGCGTTGACGCGTCAGTGACGATGTGTGAGAAGTTGGGTATAGGGGTATGGGGAGATGCATAGGTAGGTGGAATAAGTATTGAGAAGAGGTGATAAGGACAAAATATGATGTAACTTCAGGTTATGGAGGACATGATATAGGGAAAAAAGGTTAATAGGTTTGTAATGTTGTTTTGCTTAGGTGGTATGTACTAATTGTTTTATTATATTTCTTATTTTTTTAAAAAATAATTCATTATTTATTATGTTTTCAATAATCTAATTCTTGTATATTGTTTACTGTGTTTCAATTATCACACTATTTTATTGTTGTTCTTGGCTTTTTTGGGTAGACTTTGTGATGTATTACGTTGTTACTTGCTATATTCTCTTTAGTGTCTCTTTTTCACTTGAGTCGAGGGTACCTTTCTACCTTCCATGAGGTAGTTCTAAGGTTTATGTGTATTCTACCCACCATGGACCTCATTGTGGGATTTCGGTGGTATGTTATTGTTTTGGTTCCATCACTTATAGTATTTTCTTTCTTTAACTCGAAAGGAGTTTGATTTGTTGGAGAAATTTTGTTACTGTTTTGTTTAGGAAGGGGAGTGGGGGAGGCGATATGCGAATTCAAAATTTGAACTTTAGGTAGAGTGTGAGTCAAAGTTAGTTCGGATGATCCCATAAATTGTATACGAGGTCCACATTGGAGGGCTTTCCGAAAATGGAAGGACATAAATATATATGAGTGTGATGGTTTGACTAGATGTTGGTATTTTTCTTTAAGATCATTCTTTTATGGATACTCAACTACTCTGAATATGAAACGTTACAGATGTTAATGTTCTGGATTAGTCTATGACTATTATTCAAACGAAAGCTACCGTTGGATGTTTACTGCTAATCCTCATCAATTAATGAACTAAACATGTTCTGTTGAAATGAAACCTAACTGGAGTAGTAGTTGTCAAGCTCATTAAAAGATCCACTATACACAAGCTACTGGACACTTCTCCTTAATTCCTGTCATATATAATATAAAATGAGTTAAAACGGTAAAAAACACATCTAAACTATTCGACTTTATTGAGTTTCACATCTGAACTATTCGGAGTGTGAGTTTCACTCAATAGTTCAGGTATGAAACTCAAATAATTTGGACATTTTAGATGTCTTTTTGACCGTTAACTCATAAAATAATGATAAATGGGAGACAGTTGAATGCTTCAATCTTGATTGGGCCAACTGATAAGAGCAATTGAATGTCATGAAACAGGACAAATTTGCACAGATTCAACGCTTATAAAATGCTGTATATCTTCCTTTTCAATCTTCATAACTGATAACACATCTCTTGAATCCTTTTGACTTTATTTGACAGGTCAACTGTTGAGAAACTCTCATGGCATTCTCAATTTCTCTTCCAGACTTTGTTCATCCTCAACTCCGGCATGTTGTTGCAAAGATGTCTTTCTTTGACACAATTTTGTTCTATGTTAGTGTCCTCCGTTCCCTTCTTTTAACCGTTCACCTGTGTGATAGTATGCTTTAGTACACACTAGAATGTTTTTTTTTTCTTTCTAATGCTACTGTTTTTTATGTATCAGGTTGTACATCTTGTGGACAAGTTTGACTTATGGCATAGATTGCCGGTGTTACTGGGGGCAGCTTACCTAGGAATAAGAAGACACTTGCACCAGCGATACAATCTTTTACATGTAGGGAAAGTTAATGGCAAGAAATATGACACAGAAGAGTTTACCTATCGGACTGCTGATGGTTCATGCAATCATCCTGTGGATCATTTAGTGGGCAGTCAAGGAACCTTCTTTGGCCGCAACATGCTACCATCCACTTCAAGTTATGCGGTAAGCCAAAATGCAATCAATTATGCTACACTAATTAAATCATATAAATTTGATAGTTTCAATTTTACAAGACATTTCAGTTTTCTGTTGAACGTGTGATGCTGATCTTTTTAGATAGCTAACTTTCATGGTCCAATAAATGTGTCTTAATCATATAGCTGTTTGAAATATGTATCTTGAGACCTCTCAATGATCACTTGTGACAATATCATTTGATTATGCAGCTGCTGGAACCTCACCCTGTAACAGTGGCCTCCAAGCTCTTGGAAAGAAGAAAATACACAGATTGTGGGGGCCAATTCAACATGATAGCGTGCGCGTGGTTACAATTTATGATCCATGATTGGAATGACCATATGGAGGACACTGAACAGGTACCTAGTAAATATGTGTTTTAAAAACTGGAGGGGATTGAAAGGTCAAAAGTGGCCCATATGCACTTAAAGGTGTGTTTTATGTTTCACTAACACAAATTTTTCAACAGGTGGAGCTTAGAGCTCCTCAAGACGTTGCAGCAGGGTGTCCGTTGAAGTCATTTAAGTTCCTTAAAACCAAAAAACTTCCCACAGGTTCACCTGATCTGAAGTTTGGGCATTTGAATTCAAGGACCCCATGGTGGTAAGTAGTGGACTCAAAAACTCTAAACAATTGTGATTTTGTTTGTACTTCTATTTACTCCAAAGCCAGCAATAAAACTAAATATCTTTATGGTCATGGGGAGAGCTAATAGTATAGGACGATAGTTGAAAATACTTAACTGTTTAACTGAAATATTTATTAGGTAAAGAGAGAGTATTTGGTTTACCTCGACTCTTTTCACTCTACCAAACTACTGCTTTGTAGCATGCTAAAAGAGTCAAGGTAATAACCACGCGACAGACCTGGAGGGCAGAAGGGGAGGCGGAAATATTATTCCTAGTTGATGTATACACACGTCAACTCCTGTCCACACTATCCAGTTGGAACTCAATTCGATCCTTCATTTCAATGCAGACTGAAAGTTATTTGAATGGTGAAGATTTATTTCATCTTATGAATTAATATATGCTCTTGCTATTTTGTTAGGGATGGGAGTGTAATATATGGAAACAACGAAGAGGGAATGATAAGGGTGAGAAGATTTAAAGATGGAAAGCTCAGGCTCTCAGGTGATGGACTTCTGGAACATGATGATAAAGGCATTCCAATATCTGGAGATGTCCGAAACTATTGGGCAGGCTACTCTCTCTTGCAGGCCTTGTTTGTGAAGGAACATAATGCCATATGTGATATGCTTAAAGTAGGTTAATGAAGTACCCAGGTTTCTCTTTTCTATGGTCATATGAAGTTTACGTAGTATAGTTAGGACATCGTGAAAGAAGCAAATGAGCATGTATTATGACATTTGATTATTTTACACCTCAAACTGACTTTGCTTAAAATCCTGTTTTGTACCTCTCAGGAACATTACCCTGAATTTGATGATGAAAAGGTTTACCGACATGCAAGACTGATAACTTCAGCGGTCATTGCAAAAATCCATACTATTGATTGGACGCTTGAAATTGTTAAGACTGATACTCTTATGGCAGGAATGAGAATCAACTGGTAAGAGTACTTGATAAAAAATCTATGTTGCCAGATCCTTCAAAAATGTCATTGCACCTGTGCCGAATCACCTAAAAGTGATGCATTTATGGATGATTTGACACGGGTGTTGAGCAGATATAAACTAGAACTGTGATTGAATTAACGGTAGCTCCCAATTTTCAGTTAGTCGTCATGCATGATGCTTTTGCATTACGAGTTTAACTAATAATGTTAACTAAAAGAGTCTAGTGCTATTCAGGTATGGCTTGTTGGGGAAGAGAGTCAAGGATTTGTTAGGACCCAAATTTGGACCAGTATTGAGTGGCTTAGTTGGTCTTAAAAAGCCTAGAGATCACGGAACTCCCTACTCATTGACTGAAGAGTTCGTTAGCGTCTACAGAATGCACTCACTTTTACCTGACACGATTGTTCTGAGGGACCTGAAGTCGACTACATCAGAAGACAAATCCTTGCCTATTCAAGATGAGTACGTTATCCAATTACACATTATAAGCAAATTATGCCTCCTTATATGTCATAACTTGTAGGATATATGTATTTCTAACTGTTTAGTTTGATAATCAGGATTCCTATGAGGGAAATGATAGGGAAAGAAGGAGAAAAGAACTTGTCGAAAATCGGTATGGAGCAGATGCTAGTATCGATGGGTCACCAGTCATCTGGAGCTGGTACATTGTGGAATTTTCCATCATGGATGAGGAACCTTGTTCCTCATGATATCGATGGAGATGATAGACCTGATTCAATTGACATGGCCGCCTTGGACAGTATGTTTATCCCAGTGGACTTCTTTTGTATATTGTTTTCATCTTATACACATGCTAACTTTCTAAATGAACAGTTTATAGAGACAGAGAGAGGGGAGTTCCGCGGTACAATGAGTTCAGAAGGAATTTGCTGATGGTACCAATTAGCAAGTGGGAGGATTTAACTAACGACGAAGAAGTAATTGAGGCTTTACAAGAAGTATATGGCGATGATATTGAGAAGCTAGATCTCCAAATTGGTTTGCACGCGGAGAAGAAAATTAAAGGCTTTGCCATTAGTGAGACTGCCTTTTTTATATTTCTGCTCATTGCTTCAAGGTATGTCAATATAATAACGTTGTACAGAACTTAAACTCTATGCAAAACGTTTGACTACATTTATTTTTTTCCCAGGAGGTTAGAGGCTGATCGATTCTTCACAACTGATTTCAATTCGCGAACCTACACAGAGAAAGGCTTTGAATGGGTAAACAAGACAGAGACATTGAAAGATGTCATCGATCGATACTTCCCTGAAATGACAGAGAAATACATGAGATGCACAAGTGCATTCTCAGTGTGGAGTTCAGATCCAGATCCTAAACACTACTTACCTCTTTATCTGAGACCAGCAACCTAATGGTAGTACTATATTTGGTGATCAACTTTGTATGGGGTGATTATGTTAAAACAATGGTAAGTTTGCAAGGAAAATACAAACAACCCTAGTTTACGGTCAGATGAATAAACCTTGTATGAGAGGTGGCTTGAATGCGTTAACTATGGTGGAGTTTATGATATGTAGTTTTGTAGCGTGACTGTTGTATTAGAGTATGTGATGTCAATTATAGATATAATATGCAAGTGTTTTTTAAGACTATTTGTTTCCTCATTATGTTATGTTAAACTCTAAGATTAGTTTGTTTAAGGAAGCTTAACTTGTGTTAAATTTTATTTGCACCCAATATTTATATGTCAAGCAAGTCAT
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Get flanking sequences on SL2.50ch03
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![]() ![]() | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>Solyc03g119060.2.1 Alpha-dioxygenase 2 (AHRD V1 **-- Q5WM33_SOLLC); contains Interpro domain(s) IPR002007 Haem peroxidase, animal
AAAAACCTTGCCCTGTTGTAGAAATTACTGTGTGTTACTTGAATTTTGTAGCTTGATGTATCATTGATTTTGATAATTTGTTGGCTTGTGGGCGTACGTAGGAAGCTGATGCAGGCTTTGCTTATTGGCATGTGGGCGGACGCACAAAAGCTGATGCTGCCTTAGCTTATTTTTCAACTACTTCTTGTGGAGGTCAACTGTTGAGAAACTCTCATGGCATTCTCAATTTCTCTTCCAGACTTTGTTCATCCTCAACTCCGGCATGTTGTTGCAAAGATGTCTTTCTTTGACACAATTTTGTTCTATGTTGTACATCTTGTGGACAAGTTTGACTTATGGCATAGATTGCCGGTGTTACTGGGGGCAGCTTACCTAGGAATAAGAAGACACTTGCACCAGCGATACAATCTTTTACATGTAGGGAAAGTTAATGGCAAGAAATATGACACAGAAGAGTTTACCTATCGGACTGCTGATGGTTCATGCAATCATCCTGTGGATCATTTAGTGGGCAGTCAAGGAACCTTCTTTGGCCGCAACATGCTACCATCCACTTCAAGTTATGCGCTGCTGGAACCTCACCCTGTAACAGTGGCCTCCAAGCTCTTGGAAAGAAGAAAATACACAGATTGTGGGGGCCAATTCAACATGATAGCGTGCGCGTGGTTACAATTTATGATCCATGATTGGAATGACCATATGGAGGACACTGAACAGGTGGAGCTTAGAGCTCCTCAAGACGTTGCAGCAGGGTGTCCGTTGAAGTCATTTAAGTTCCTTAAAACCAAAAAACTTCCCACAGGTTCACCTGATCTGAAGTTTGGGCATTTGAATTCAAGGACCCCATGGTGGGATGGGAGTGTAATATATGGAAACAACGAAGAGGGAATGATAAGGGTGAGAAGATTTAAAGATGGAAAGCTCAGGCTCTCAGGTGATGGACTTCTGGAACATGATGATAAAGGCATTCCAATATCTGGAGATGTCCGAAACTATTGGGCAGGCTACTCTCTCTTGCAGGCCTTGTTTGTGAAGGAACATAATGCCATATGTGATATGCTTAAAGAACATTACCCTGAATTTGATGATGAAAAGGTTTACCGACATGCAAGACTGATAACTTCAGCGGTCATTGCAAAAATCCATACTATTGATTGGACGCTTGAAATTGTTAAGACTGATACTCTTATGGCAGGAATGAGAATCAACTGGTATGGCTTGTTGGGGAAGAGAGTCAAGGATTTGTTAGGACCCAAATTTGGACCAGTATTGAGTGGCTTAGTTGGTCTTAAAAAGCCTAGAGATCACGGAACTCCCTACTCATTGACTGAAGAGTTCGTTAGCGTCTACAGAATGCACTCACTTTTACCTGACACGATTGTTCTGAGGGACCTGAAGTCGACTACATCAGAAGACAAATCCTTGCCTATTCAAGATGAGATTCCTATGAGGGAAATGATAGGGAAAGAAGGAGAAAAGAACTTGTCGAAAATCGGTATGGAGCAGATGCTAGTATCGATGGGTCACCAGTCATCTGGAGCTGGTACATTGTGGAATTTTCCATCATGGATGAGGAACCTTGTTCCTCATGATATCGATGGAGATGATAGACCTGATTCAATTGACATGGCCGCCTTGGACATTTATAGAGACAGAGAGAGGGGAGTTCCGCGGTACAATGAGTTCAGAAGGAATTTGCTGATGGTACCAATTAGCAAGTGGGAGGATTTAACTAACGACGAAGAAGTAATTGAGGCTTTACAAGAAGTATATGGCGATGATATTGAGAAGCTAGATCTCCAAATTGGTTTGCACGCGGAGAAGAAAATTAAAGGCTTTGCCATTAGTGAGACTGCCTTTTTTATATTTCTGCTCATTGCTTCAAGGAGGTTAGAGGCTGATCGATTCTTCACAACTGATTTCAATTCGCGAACCTACACAGAGAAAGGCTTTGAATGGGTAAACAAGACAGAGACATTGAAAGATGTCATCGATCGATACTTCCCTGAAATGACAGAGAAATACATGAGATGCACAAGTGCATTCTCAGTGTGGAGTTCAGATCCAGATCCTAAACACTACTTACCTCTTTATCTGAGACCAGCAACCTAATGGTAGTACTATATTTGGTGATCAACTTTGTATGGGGTGATTATGTTAAAACAATGGTAAGTTTGCAAGGAAAATACAAACAACCCTAGTTTACGGTCAGATGAATAAACCTTGTATGAGAGGTGGCTTGAATGCGTTAACTATGGTGGAGTTTATGATATGTAGTTTTGTAGCGTGACTGTTGTATTAGAGTATGTGATGTCAATTATAGATATAATATGCAAGTGTTTTTTAAGACTATTTGTTTCCTCATTATGTTATGTTAAACTCTAAGATTAGTTTGTTTAAGGAAGCTTAACTTGTGTTAAATTTTATTTGCACCCAATATTTATATGTCAAGCAAGTCAT
AAAAACCTTGCCCTGTTGTAGAAATTACTGTGTGTTACTTGAATTTTGTAGCTTGATGTATCATTGATTTTGATAATTTGTTGGCTTGTGGGCGTACGTAGGAAGCTGATGCAGGCTTTGCTTATTGGCATGTGGGCGGACGCACAAAAGCTGATGCTGCCTTAGCTTATTTTTCAACTACTTCTTGTGGAGGTCAACTGTTGAGAAACTCTCATGGCATTCTCAATTTCTCTTCCAGACTTTGTTCATCCTCAACTCCGGCATGTTGTTGCAAAGATGTCTTTCTTTGACACAATTTTGTTCTATGTTGTACATCTTGTGGACAAGTTTGACTTATGGCATAGATTGCCGGTGTTACTGGGGGCAGCTTACCTAGGAATAAGAAGACACTTGCACCAGCGATACAATCTTTTACATGTAGGGAAAGTTAATGGCAAGAAATATGACACAGAAGAGTTTACCTATCGGACTGCTGATGGTTCATGCAATCATCCTGTGGATCATTTAGTGGGCAGTCAAGGAACCTTCTTTGGCCGCAACATGCTACCATCCACTTCAAGTTATGCGCTGCTGGAACCTCACCCTGTAACAGTGGCCTCCAAGCTCTTGGAAAGAAGAAAATACACAGATTGTGGGGGCCAATTCAACATGATAGCGTGCGCGTGGTTACAATTTATGATCCATGATTGGAATGACCATATGGAGGACACTGAACAGGTGGAGCTTAGAGCTCCTCAAGACGTTGCAGCAGGGTGTCCGTTGAAGTCATTTAAGTTCCTTAAAACCAAAAAACTTCCCACAGGTTCACCTGATCTGAAGTTTGGGCATTTGAATTCAAGGACCCCATGGTGGGATGGGAGTGTAATATATGGAAACAACGAAGAGGGAATGATAAGGGTGAGAAGATTTAAAGATGGAAAGCTCAGGCTCTCAGGTGATGGACTTCTGGAACATGATGATAAAGGCATTCCAATATCTGGAGATGTCCGAAACTATTGGGCAGGCTACTCTCTCTTGCAGGCCTTGTTTGTGAAGGAACATAATGCCATATGTGATATGCTTAAAGAACATTACCCTGAATTTGATGATGAAAAGGTTTACCGACATGCAAGACTGATAACTTCAGCGGTCATTGCAAAAATCCATACTATTGATTGGACGCTTGAAATTGTTAAGACTGATACTCTTATGGCAGGAATGAGAATCAACTGGTATGGCTTGTTGGGGAAGAGAGTCAAGGATTTGTTAGGACCCAAATTTGGACCAGTATTGAGTGGCTTAGTTGGTCTTAAAAAGCCTAGAGATCACGGAACTCCCTACTCATTGACTGAAGAGTTCGTTAGCGTCTACAGAATGCACTCACTTTTACCTGACACGATTGTTCTGAGGGACCTGAAGTCGACTACATCAGAAGACAAATCCTTGCCTATTCAAGATGAGATTCCTATGAGGGAAATGATAGGGAAAGAAGGAGAAAAGAACTTGTCGAAAATCGGTATGGAGCAGATGCTAGTATCGATGGGTCACCAGTCATCTGGAGCTGGTACATTGTGGAATTTTCCATCATGGATGAGGAACCTTGTTCCTCATGATATCGATGGAGATGATAGACCTGATTCAATTGACATGGCCGCCTTGGACATTTATAGAGACAGAGAGAGGGGAGTTCCGCGGTACAATGAGTTCAGAAGGAATTTGCTGATGGTACCAATTAGCAAGTGGGAGGATTTAACTAACGACGAAGAAGTAATTGAGGCTTTACAAGAAGTATATGGCGATGATATTGAGAAGCTAGATCTCCAAATTGGTTTGCACGCGGAGAAGAAAATTAAAGGCTTTGCCATTAGTGAGACTGCCTTTTTTATATTTCTGCTCATTGCTTCAAGGAGGTTAGAGGCTGATCGATTCTTCACAACTGATTTCAATTCGCGAACCTACACAGAGAAAGGCTTTGAATGGGTAAACAAGACAGAGACATTGAAAGATGTCATCGATCGATACTTCCCTGAAATGACAGAGAAATACATGAGATGCACAAGTGCATTCTCAGTGTGGAGTTCAGATCCAGATCCTAAACACTACTTACCTCTTTATCTGAGACCAGCAACCTAATGGTAGTACTATATTTGGTGATCAACTTTGTATGGGGTGATTATGTTAAAACAATGGTAAGTTTGCAAGGAAAATACAAACAACCCTAGTTTACGGTCAGATGAATAAACCTTGTATGAGAGGTGGCTTGAATGCGTTAACTATGGTGGAGTTTATGATATGTAGTTTTGTAGCGTGACTGTTGTATTAGAGTATGTGATGTCAATTATAGATATAATATGCAAGTGTTTTTTAAGACTATTTGTTTCCTCATTATGTTATGTTAAACTCTAAGATTAGTTTGTTTAAGGAAGCTTAACTTGTGTTAAATTTTATTTGCACCCAATATTTATATGTCAAGCAAGTCAT
![]() ![]() | translated polypeptide sequence |
>Solyc03g119060.2.1 Alpha-dioxygenase 2 (AHRD V1 **-- Q5WM33_SOLLC); contains Interpro domain(s) IPR002007 Haem peroxidase, animal
MAFSISLPDFVHPQLRHVVAKMSFFDTILFYVVHLVDKFDLWHRLPVLLGAAYLGIRRHLHQRYNLLHVGKVNGKKYDTEEFTYRTADGSCNHPVDHLVGSQGTFFGRNMLPSTSSYALLEPHPVTVASKLLERRKYTDCGGQFNMIACAWLQFMIHDWNDHMEDTEQVELRAPQDVAAGCPLKSFKFLKTKKLPTGSPDLKFGHLNSRTPWWDGSVIYGNNEEGMIRVRRFKDGKLRLSGDGLLEHDDKGIPISGDVRNYWAGYSLLQALFVKEHNAICDMLKEHYPEFDDEKVYRHARLITSAVIAKIHTIDWTLEIVKTDTLMAGMRINWYGLLGKRVKDLLGPKFGPVLSGLVGLKKPRDHGTPYSLTEEFVSVYRMHSLLPDTIVLRDLKSTTSEDKSLPIQDEIPMREMIGKEGEKNLSKIGMEQMLVSMGHQSSGAGTLWNFPSWMRNLVPHDIDGDDRPDSIDMAALDIYRDRERGVPRYNEFRRNLLMVPISKWEDLTNDEEVIEALQEVYGDDIEKLDLQIGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTDFNSRTYTEKGFEWVNKTETLKDVIDRYFPEMTEKYMRCTSAFSVWSSDPDPKHYLPLYLRPAT*
MAFSISLPDFVHPQLRHVVAKMSFFDTILFYVVHLVDKFDLWHRLPVLLGAAYLGIRRHLHQRYNLLHVGKVNGKKYDTEEFTYRTADGSCNHPVDHLVGSQGTFFGRNMLPSTSSYALLEPHPVTVASKLLERRKYTDCGGQFNMIACAWLQFMIHDWNDHMEDTEQVELRAPQDVAAGCPLKSFKFLKTKKLPTGSPDLKFGHLNSRTPWWDGSVIYGNNEEGMIRVRRFKDGKLRLSGDGLLEHDDKGIPISGDVRNYWAGYSLLQALFVKEHNAICDMLKEHYPEFDDEKVYRHARLITSAVIAKIHTIDWTLEIVKTDTLMAGMRINWYGLLGKRVKDLLGPKFGPVLSGLVGLKKPRDHGTPYSLTEEFVSVYRMHSLLPDTIVLRDLKSTTSEDKSLPIQDEIPMREMIGKEGEKNLSKIGMEQMLVSMGHQSSGAGTLWNFPSWMRNLVPHDIDGDDRPDSIDMAALDIYRDRERGVPRYNEFRRNLLMVPISKWEDLTNDEEVIEALQEVYGDDIEKLDLQIGLHAEKKIKGFAISETAFFIFLLIASRRLEADRFFTTDFNSRTYTEKGFEWVNKTETLKDVIDRYFPEMTEKYMRCTSAFSVWSSDPDPKHYLPLYLRPAT*
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Other genome matches | None |
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Identification and isolation of the FEEBLY gene from tomato by transposon tagging.
Molecular & general genetics : MGG (1996)
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The Ac/Ds transposon system from maize was used for insertional mutagenesis in tomato. Marker genes were employed for the selection of plants carrying a total of 471 unique Ds elements. Three mutants were obtained with Ds insertions closely linked to recessive mutations: feebly (fb), yellow jim (yj) and dopey (dp). The fb seedlings produced high anthocyanin levels, developed into small fragile plants, and were insensitive to the herbicide phosphinothricin. The yj plants had yellow leaves as a result of reduced levels of chlorophyll. The dp mutants completely or partially lacked inflorescences. The fb and yj loci were genetically linked to the Ds donor site on chromosome 3. Reactivation of the Ds element in the fb mutants by crosses with an Ac-containing line resulted in restoration of the wild-type phenotypes. Plant DNA fragments flanking both sides of the Ds element in the fb mutant were isolated by the inverse polymerase chain reaction. Molecular analysis showed that phenotypic reversions of fb were correlated with excisions of Ds. DNA sequence analysis of Fb reversion alleles showed the characteristic Ds footprints. Northern and cDNA sequence analysis indicated that transcription of the FEEBLY (FB) gene was impeded by the insertion of Ds in an intron. Comparison of the predicted amino acid sequence of the FB protein with other database sequences indicated that FB is a novel gene.
van der Biezen, EA. Brandwagt, BF. van Leeuwen, W. Nijkamp, HJ. Hille, J.
Molecular & general genetics : MGG.
1996.
251(3).
267-80.
Functional analysis of {alpha}-DOX2, an active {alpha}-dioxygenase critical for normal development in tomato plants.
Plant physiology (2009)
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Plant alpha-dioxygenases initiate the synthesis of oxylipins by catalyzing the incorporation of molecular oxygen at the alpha-methylene carbon atom of fatty acids. Previously, alpha-DOX1 has been shown to display alpha-dioxygenase activity and to be implicated in plant defense. In the present study we investigated the function of a second alpha-dioxygenase isoform, alpha-DOX2, in Solanum lycopersicum and Arabidopsis thaliana. Recombinant Slalpha-DOX2 and Atalpha-DOX2 proteins, catalyzed the conversion of a wide range of fatty acids into 2(R)-hydroperoxy derivatives. Expression of Slalpha-DOX2 and Atalpha-DOX2 was found in seedlings and increased during senescence induced by detachment of leaves. In contrast, microbial infection, earlier known to increase the expression of alpha-DOX1, did not alter the expression of Slalpha-DOX2 or Atalpha-DOX2. The tomato mutant divaricata, characterized by early dwarfing and anthocyanin accumulation, carries a mutation at the Slalpha-DOX2 locus and was chosen for functional studies of alpha-DOX2. Transcriptional changes in such mutants showed the up-regulation of genes playing roles in lipid and phenylpropanoid metabolism, the latter being in consonance with the anthocyanin accumulation. Transgenic expression of Atalpha-DOX2 and Slalpha-DOX2 in divaricata partially complemented the compromised phenotype in mature plants and fully complemented it in seedlings, thus indicating the functional exchangeability between alpha-DOX2 from tomato and Arabidopsis. However, deletion of Atalpha-DOX2 in Arabidopsis plants did not provoke any visible phenotypic alteration indicating that the relative importance of alpha-DOX2 in plant physiology is species-specific.
Bannenberg, G. Martinez, M. Rodriguez, MJ. Lopez, MA. de Leon, IP. Hamberg, M. Castresana, C.
Plant physiology.
2009.
().
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