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Potato locus ubiquitin
| Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Links to external databases
Links to external databases
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| Registry name: | None | [Associate registry name] |
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Accessions and images (0)
Accessions and images (0)
| [Associate accession] |
Accession name:
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| Alleles (0) | None | [Add new Allele] |
Associated loci (0)
Associated loci (0)
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| Associated loci - graphical view | None |
SolCyc links
SolCyc links
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Sequence annotations
Sequence annotations
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Genome features
Genome features
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Genomic sequence
Genomic sequence
| unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400011242 PGSC_DMv3_219_ch10:793886..799450
TGTTTTTAGGGCCAATAGAATAGAACAAATAAATAGGGTTCCAATTCTTTTTCCTTATTATTTCATCCGAATTTTTGTGCTTAATAAACTTAGCGTAAAGGGAACGAGCTGTTTCTGTAGGAGCCAAATCGATCGATCGATCGATCAATCAATCAATCATGCAGATCTTTGTGAAAACCCTAACCGGAAAGACCATCACCCTCGAAGTTGAGAGCAGCGATACCATTGACAATGTCAAGGCCAAAATTCAGGTACTATTTTCATTCTTCACAATTTTGTGCTGTTGTTTTCATAAATTAGGGTTTTGCATCTTGTTATGTGTGTGGAGATTGATATGATACGTATAATTGCTCAACGTGTTTGTGTTTGTCAATTCGTGATCTCAATAGTTGATTTTGTTCTATATGTACTAACTTTGGTGGACATAGTTAGGCACTGATACTTGTTGCGGGTGTGAGGTGACAGGTATCACGTCTCAATGGCTTGTTTTGGGTTAAAAGGGATGTGGGTGGGTGGGTTTAATTTGGTTTTACTTAATTTAGATGGATTTTTTGCTTTTTTCACTGATTTAATTAATGATGTGGACGCATCATAGTTGGCCTCAAGTACAAAGCATATGTTAAAACCAGATATGTTTTCCGTTAAAAAATACTGGCATTAATGACATTTATTTAATACACTAGTTTTCCGGATATACACTAGCTGATTTCGTCTCATCCATCCTAGATTTGGTGGACAGAGTCACCTAATACATGTTGTGCGAGTGAGTGTTGTGGGAGTGAGGCAGGTATTCCGTTGGAATTAGTCATTAAAAATTTTTATCTAGTTGCACCAACTCTAAACACTTGCTGATTTTGTACCATCTGTTGTAGATTTGGTGGACATATTTACCTGATACATGTTGAGGGTTTGAGGTGACAGGTATCTCGTTGGAATTAGTCATATAAAAAAATATAGTTGCACCGGCTCTAAGCACTAGCTGATTTAGTCTCATTTATCCTAGATGTGGTGGACAAGGTTACCTTATACATGTAGTGGGAGTAACATTGAAATTGATGGAGTATTTCATATACTTAAGTATGTTTCCAATAAAACAAGATACTTTCAAACCCTTTTTGGTAATACATAGCCCCTTGGACTAACTTTTTGTGGGTGAAGGATGTATCATAACCTTTATCTATGTCTTATTTTTACGAAAAAGGGTAAAAGATGTCCTAAAACTATGTGAAATTGAACAAAAATGTCATCGATTAATAGTTTGGTCCTAAAATGCCCTTGCCATCTGTATGAAGTTTGAACAAAACCTCTTTCATCCTATTGGGAAAAATATTTTGTATTATATCAGGAAAAAGAATGACCCGGGGTTCTCACGGGCTGAGTCTTCGTGGAAGTTATGGATTCGGTAAAATTTAGTAACTTTAGCTCAAACTTTATATGTGTGTTAAATATTTCTTTTGATATAGATAAATAATCTTCTTTTTTTTTTTTGATAAAAGTAACAGGATAAATAATCTATTCAAAATTCAGAAAGTAAAAATAATTTTTGTAATTCTGAATTCATAAATTAAAAAATCTAACTCCGGCAATGAGGAACCTATTTTAATTTAGAAGAGACCCAAATTTTTTATTACAGAAACCTGAGTTTTAAATGACACATTTGTTTGTAGTACTTTGTAAAACAATAAAGATACTAAACTATATAATTGAAAAAGATTTATATAGTTGCACCCGGCTCTAAGTCTAGTGAAGGAAAGTGGTAGTCATGATAATTAAAAGATGCTAATTAGTTTTGTTTTTTTGAGAAGCAAAAATGCTATTTTGTTAATGTTACATGTTATTTTTATTTTGCAAGTGTTGATCTTTCCATTGCCTGCTGATGGAAACTGAATTTGTTCCTCATAAGCTTTATTCCATTAGATACGGATGGTCTGTCAAATACAGTACCAGAAAGCTTGTCTTTTGGAGCCTCAATAGATACAGGCTTTTATTGGCACATACAATGCACTTAGTCTGGATTGTCCTTGTTGTGCATAAATGGGATATGCACTTCAAATTGATGTCCAACTTATGAATGATAAACTCTCTAAAGCTACCTGCATCACCTTTAACTCACTTTTGTCTTTTCTTTTGAAAAAAAAAGAACTTTCCTATGCCTCTTTACAGGTGGTTAAATATATTGAATTATACGAATGTCCTGAATGTAAACACACCAGATTTTTTTATTTTTTTTTGATAACCGAGAAATCCGTATGTGACCCGCCCTTTGGACCAATCACAGCCTTCTAAACTCGGTGGATAATGGGCCCGCCCCTCTACCCTTCTCCACTTAAATACCAGGCTTTGCTTTGCATGGTGTGGGTCTTGAACCTGCGACCTAAGTCACAAATCCTCCACCTTTTGCCACTTGAGCTAGGCCTTGGAGGCAAACACACCAGATTTTGATTGCATACTTTCAGCAATATTTGATAGAAAACAGACAGAAGCATGCAATGATGTGTTAGCACCAGAATGTAGTCTTGTGTGTGATTGATGGTAGCTTAAGTTTAACTATTCTACTGTTTGTTCTTCTCTTTTTGATAAATATTTGTTCTGGAGCATTTATCACCTTGGATGGTCCACGTTAAGTCCCTGTTTCACTTTCGAAGGTTATCTTCACTTCTTGCTGGCCCTTTCTAATCTTCCTCGAGATGTTATTGGAGTGAATGTACATCATGTGAAGACGATTGATGGTGCTATCACACTCTTTATGATATCCCTTAGGCCACTGTTACAAGATATTCACCTGTTTGGAGCTTGTTTTGAAGCTTTTTATCTTGTTTAGACACTAGGTATAGTGAACCCCTTGTCAAGTAGGTCCCAAATTTTCTCTTTCAGTTCTTTTAGTTTGGATGGAGCCTTTCATTACGGAAGGAAATGGGTAAAGTCTGTCCCAGATGCTAGAGATCTATGCTCCCTAAACCATGGGTTTTCCTATTTCTGAGGCTAGAGGAACTCGATCAAATACAGCTCAGGCCTATGCTAAGGTTTTTACTTCCTAACTAGTTTATTTGAAGTCAACCTTAATATTGTAAGATATGCATTGCCAAAATATGACCAACCCACGAAATGTAAGAGCCCGCCATAACACACAAGGAAAACCTCATAATACTGTCAAAGCTATGGTCTTTGAATTACAACTGTACATACATTAACTTCTAATTGCCTAAAATATGTGATTTGCTGCATGTTGTATGGTCAAGTGTTGCCTTCTGTTCAGTTTCCCCCCCTTCTTCTGCTATCTCTGCACTGACCTATCCTGGGTTTGTCCACTTCTCTTCTGTAGTATTTGTTAACTGTTGGCGTTAGTGCTAACATGTAACAGTCAATCTTCTGTTCTTCTCATTTCACGTAGAGCTGATGTGTTGCTTACCAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAATTGGAAGATGGTCGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCATCTTGTTCTGAGGCTCAGGGGAGGAACCATGATCAAGGTGAAGACTCTCACTGGAAAGGAAATTGAGATCGACATTGAACCCACTGACACCATTGATCGTATTAAGGAGCGTGTTGAGGAGAAAGAAGGAATACCTCCTGTGCAGCAAAGGTTTGTATTTCCTTTATTTCATTCAAATTGCATACACTAGATTTGTGGTTTTCAGTGTTTGTGTTTTCTCCTCTTTCCCATGCCATACTGCTTCCTCTCCCCCACACTATGAGACCAAAAGATCAGTGATGTTGTATGTGTGATGCTGTGTGCCTGGCTTATGAATCTTCTTTGGAATTCCCTTTAAATCTGTGCAGGTTGTCATGTTTCTGTTCCCTGGTATTTCTAGCATTCCCGTAATAACTGTACTTTTTTAGGACTTAAAATGTCTTCTATTATTCAATGCTCTACTATACCCGATTCCATAATTGTAATCATCCGTGGACCATACTGTGACAATTGAATGTCTCATATGATTTGCTTAAATGCAGTGTATTTTAAGGATAGAGGGAATGTGAAATCCTCATGTGCATTTTGGGGCATACCCTAGGTTTTGGATCATACAATTGAACTTTTGTGTGGCTTACTTGACAGCATAAAATTAAAGACTTAATGACTTGAAATATGTCAGGTAGTTCTAAAAAAAACTAGTAGTGCTGTAAGCTTAAGAGCGTTGTAAATAGTGGGCGGGTCTAACAGGTCTTGCATCTGCAATTCTGCTTAATACATTGTCTAGAAAAATCAGCAGGTCTTACAGATCTTGTAATCTGCATCTGCTCTCATTAGCCAAATTTTATCAGCCTAATTTCATACCTGCCTGCTAGCATTGCCAGAAAAATGGTGGGCATCCTGGTGTTTGTTTTTCTAAGTTTGGTGTAAAATTTTATTATTATTTTTTTGGATAATTATGAAATTCTTGGGGTGGTTAATGATTCGAAACTCTATCAACAATGTTCTGCCCCTCTGCCCTTCTTAAACACAAGGTTTTTGTCTTCAGCAGAATTCGAACCCAAGATGTGCACCTTACCAACATACCCACATCACATATTGCACTCTTACCACTAGACCGAAGCCCTGGAGACATTCAATTCTATCTCTCCTTTTGAGAGATATTTCGCTTAGTCTTGGCTTCGTAAAAGGATTTTCTTGCAAGTAGACAGATATAACGAACATGCAGTTTGTTATAATAATTTGGACAAGTTTGCTTCTTCCCTTCCTTATCAGTGACAGTGAATGCCAAAAAAACAGAACTATATGAGTGCTCAGTCTGTTTGTGTTTGTATCTCATCCGATTGAGATAATAGAAAATATGAAAACATTATATTTCTCTTCATTAACCATTTTGACAGACTTTTTTGTTGTCTGTCATGATCATTATATTACTATAGCACATCAGGATATGGCTTTTACTGGAATACCATTTCTTAGTTTATGGAAATCCATGGTGTACTAATTGAGATGTTGTAGGATATCACCTTCATCTTATGGGCAGAAGGTGAACAGTGGCTCGGAGATATTGAACTTGTTGATATATCTATTTTTGTGAACTACCTACCCAGTTTATCTTTACCCTATGTGATAGAAGTTGTGTTCATAGTTTGTTATTTGTTTTTGGCAGTTTGAGACAGTGGATTTACACTTTGTACTTTTGGTTTAATGCAGGCTTATATACGCTGGAAAACAGCTAGCAGATGACAAGACAGCTAAAGACTACAATATCGAAGGTGGTTCTGTTCTTCACCTTGTTCTTGCACTTAGGGGTGGCAGACTCTAGGTTGCACTTAACTTGGTGAAAACTTAGATGTCCTGTCTTTATTCCATGAACTTGGGATGAACATTTCTTCTCTTCCCTTTTTTGGTGATGTACGATTGGAATAAACAGGAAAAACTTGTGGTTGGTTGAACATTTTGTGATTGTCTGCACCTTATGTTAAATTCAGGTTTAATTTGCTAATATGTAGTCTCTTTTTTTTCCCCATTTCTTGCTGCAATGTGAGGAGGCTATTACTCCCT
TGTTTTTAGGGCCAATAGAATAGAACAAATAAATAGGGTTCCAATTCTTTTTCCTTATTATTTCATCCGAATTTTTGTGCTTAATAAACTTAGCGTAAAGGGAACGAGCTGTTTCTGTAGGAGCCAAATCGATCGATCGATCGATCAATCAATCAATCATGCAGATCTTTGTGAAAACCCTAACCGGAAAGACCATCACCCTCGAAGTTGAGAGCAGCGATACCATTGACAATGTCAAGGCCAAAATTCAGGTACTATTTTCATTCTTCACAATTTTGTGCTGTTGTTTTCATAAATTAGGGTTTTGCATCTTGTTATGTGTGTGGAGATTGATATGATACGTATAATTGCTCAACGTGTTTGTGTTTGTCAATTCGTGATCTCAATAGTTGATTTTGTTCTATATGTACTAACTTTGGTGGACATAGTTAGGCACTGATACTTGTTGCGGGTGTGAGGTGACAGGTATCACGTCTCAATGGCTTGTTTTGGGTTAAAAGGGATGTGGGTGGGTGGGTTTAATTTGGTTTTACTTAATTTAGATGGATTTTTTGCTTTTTTCACTGATTTAATTAATGATGTGGACGCATCATAGTTGGCCTCAAGTACAAAGCATATGTTAAAACCAGATATGTTTTCCGTTAAAAAATACTGGCATTAATGACATTTATTTAATACACTAGTTTTCCGGATATACACTAGCTGATTTCGTCTCATCCATCCTAGATTTGGTGGACAGAGTCACCTAATACATGTTGTGCGAGTGAGTGTTGTGGGAGTGAGGCAGGTATTCCGTTGGAATTAGTCATTAAAAATTTTTATCTAGTTGCACCAACTCTAAACACTTGCTGATTTTGTACCATCTGTTGTAGATTTGGTGGACATATTTACCTGATACATGTTGAGGGTTTGAGGTGACAGGTATCTCGTTGGAATTAGTCATATAAAAAAATATAGTTGCACCGGCTCTAAGCACTAGCTGATTTAGTCTCATTTATCCTAGATGTGGTGGACAAGGTTACCTTATACATGTAGTGGGAGTAACATTGAAATTGATGGAGTATTTCATATACTTAAGTATGTTTCCAATAAAACAAGATACTTTCAAACCCTTTTTGGTAATACATAGCCCCTTGGACTAACTTTTTGTGGGTGAAGGATGTATCATAACCTTTATCTATGTCTTATTTTTACGAAAAAGGGTAAAAGATGTCCTAAAACTATGTGAAATTGAACAAAAATGTCATCGATTAATAGTTTGGTCCTAAAATGCCCTTGCCATCTGTATGAAGTTTGAACAAAACCTCTTTCATCCTATTGGGAAAAATATTTTGTATTATATCAGGAAAAAGAATGACCCGGGGTTCTCACGGGCTGAGTCTTCGTGGAAGTTATGGATTCGGTAAAATTTAGTAACTTTAGCTCAAACTTTATATGTGTGTTAAATATTTCTTTTGATATAGATAAATAATCTTCTTTTTTTTTTTTGATAAAAGTAACAGGATAAATAATCTATTCAAAATTCAGAAAGTAAAAATAATTTTTGTAATTCTGAATTCATAAATTAAAAAATCTAACTCCGGCAATGAGGAACCTATTTTAATTTAGAAGAGACCCAAATTTTTTATTACAGAAACCTGAGTTTTAAATGACACATTTGTTTGTAGTACTTTGTAAAACAATAAAGATACTAAACTATATAATTGAAAAAGATTTATATAGTTGCACCCGGCTCTAAGTCTAGTGAAGGAAAGTGGTAGTCATGATAATTAAAAGATGCTAATTAGTTTTGTTTTTTTGAGAAGCAAAAATGCTATTTTGTTAATGTTACATGTTATTTTTATTTTGCAAGTGTTGATCTTTCCATTGCCTGCTGATGGAAACTGAATTTGTTCCTCATAAGCTTTATTCCATTAGATACGGATGGTCTGTCAAATACAGTACCAGAAAGCTTGTCTTTTGGAGCCTCAATAGATACAGGCTTTTATTGGCACATACAATGCACTTAGTCTGGATTGTCCTTGTTGTGCATAAATGGGATATGCACTTCAAATTGATGTCCAACTTATGAATGATAAACTCTCTAAAGCTACCTGCATCACCTTTAACTCACTTTTGTCTTTTCTTTTGAAAAAAAAAGAACTTTCCTATGCCTCTTTACAGGTGGTTAAATATATTGAATTATACGAATGTCCTGAATGTAAACACACCAGATTTTTTTATTTTTTTTTGATAACCGAGAAATCCGTATGTGACCCGCCCTTTGGACCAATCACAGCCTTCTAAACTCGGTGGATAATGGGCCCGCCCCTCTACCCTTCTCCACTTAAATACCAGGCTTTGCTTTGCATGGTGTGGGTCTTGAACCTGCGACCTAAGTCACAAATCCTCCACCTTTTGCCACTTGAGCTAGGCCTTGGAGGCAAACACACCAGATTTTGATTGCATACTTTCAGCAATATTTGATAGAAAACAGACAGAAGCATGCAATGATGTGTTAGCACCAGAATGTAGTCTTGTGTGTGATTGATGGTAGCTTAAGTTTAACTATTCTACTGTTTGTTCTTCTCTTTTTGATAAATATTTGTTCTGGAGCATTTATCACCTTGGATGGTCCACGTTAAGTCCCTGTTTCACTTTCGAAGGTTATCTTCACTTCTTGCTGGCCCTTTCTAATCTTCCTCGAGATGTTATTGGAGTGAATGTACATCATGTGAAGACGATTGATGGTGCTATCACACTCTTTATGATATCCCTTAGGCCACTGTTACAAGATATTCACCTGTTTGGAGCTTGTTTTGAAGCTTTTTATCTTGTTTAGACACTAGGTATAGTGAACCCCTTGTCAAGTAGGTCCCAAATTTTCTCTTTCAGTTCTTTTAGTTTGGATGGAGCCTTTCATTACGGAAGGAAATGGGTAAAGTCTGTCCCAGATGCTAGAGATCTATGCTCCCTAAACCATGGGTTTTCCTATTTCTGAGGCTAGAGGAACTCGATCAAATACAGCTCAGGCCTATGCTAAGGTTTTTACTTCCTAACTAGTTTATTTGAAGTCAACCTTAATATTGTAAGATATGCATTGCCAAAATATGACCAACCCACGAAATGTAAGAGCCCGCCATAACACACAAGGAAAACCTCATAATACTGTCAAAGCTATGGTCTTTGAATTACAACTGTACATACATTAACTTCTAATTGCCTAAAATATGTGATTTGCTGCATGTTGTATGGTCAAGTGTTGCCTTCTGTTCAGTTTCCCCCCCTTCTTCTGCTATCTCTGCACTGACCTATCCTGGGTTTGTCCACTTCTCTTCTGTAGTATTTGTTAACTGTTGGCGTTAGTGCTAACATGTAACAGTCAATCTTCTGTTCTTCTCATTTCACGTAGAGCTGATGTGTTGCTTACCAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAATTGGAAGATGGTCGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCATCTTGTTCTGAGGCTCAGGGGAGGAACCATGATCAAGGTGAAGACTCTCACTGGAAAGGAAATTGAGATCGACATTGAACCCACTGACACCATTGATCGTATTAAGGAGCGTGTTGAGGAGAAAGAAGGAATACCTCCTGTGCAGCAAAGGTTTGTATTTCCTTTATTTCATTCAAATTGCATACACTAGATTTGTGGTTTTCAGTGTTTGTGTTTTCTCCTCTTTCCCATGCCATACTGCTTCCTCTCCCCCACACTATGAGACCAAAAGATCAGTGATGTTGTATGTGTGATGCTGTGTGCCTGGCTTATGAATCTTCTTTGGAATTCCCTTTAAATCTGTGCAGGTTGTCATGTTTCTGTTCCCTGGTATTTCTAGCATTCCCGTAATAACTGTACTTTTTTAGGACTTAAAATGTCTTCTATTATTCAATGCTCTACTATACCCGATTCCATAATTGTAATCATCCGTGGACCATACTGTGACAATTGAATGTCTCATATGATTTGCTTAAATGCAGTGTATTTTAAGGATAGAGGGAATGTGAAATCCTCATGTGCATTTTGGGGCATACCCTAGGTTTTGGATCATACAATTGAACTTTTGTGTGGCTTACTTGACAGCATAAAATTAAAGACTTAATGACTTGAAATATGTCAGGTAGTTCTAAAAAAAACTAGTAGTGCTGTAAGCTTAAGAGCGTTGTAAATAGTGGGCGGGTCTAACAGGTCTTGCATCTGCAATTCTGCTTAATACATTGTCTAGAAAAATCAGCAGGTCTTACAGATCTTGTAATCTGCATCTGCTCTCATTAGCCAAATTTTATCAGCCTAATTTCATACCTGCCTGCTAGCATTGCCAGAAAAATGGTGGGCATCCTGGTGTTTGTTTTTCTAAGTTTGGTGTAAAATTTTATTATTATTTTTTTGGATAATTATGAAATTCTTGGGGTGGTTAATGATTCGAAACTCTATCAACAATGTTCTGCCCCTCTGCCCTTCTTAAACACAAGGTTTTTGTCTTCAGCAGAATTCGAACCCAAGATGTGCACCTTACCAACATACCCACATCACATATTGCACTCTTACCACTAGACCGAAGCCCTGGAGACATTCAATTCTATCTCTCCTTTTGAGAGATATTTCGCTTAGTCTTGGCTTCGTAAAAGGATTTTCTTGCAAGTAGACAGATATAACGAACATGCAGTTTGTTATAATAATTTGGACAAGTTTGCTTCTTCCCTTCCTTATCAGTGACAGTGAATGCCAAAAAAACAGAACTATATGAGTGCTCAGTCTGTTTGTGTTTGTATCTCATCCGATTGAGATAATAGAAAATATGAAAACATTATATTTCTCTTCATTAACCATTTTGACAGACTTTTTTGTTGTCTGTCATGATCATTATATTACTATAGCACATCAGGATATGGCTTTTACTGGAATACCATTTCTTAGTTTATGGAAATCCATGGTGTACTAATTGAGATGTTGTAGGATATCACCTTCATCTTATGGGCAGAAGGTGAACAGTGGCTCGGAGATATTGAACTTGTTGATATATCTATTTTTGTGAACTACCTACCCAGTTTATCTTTACCCTATGTGATAGAAGTTGTGTTCATAGTTTGTTATTTGTTTTTGGCAGTTTGAGACAGTGGATTTACACTTTGTACTTTTGGTTTAATGCAGGCTTATATACGCTGGAAAACAGCTAGCAGATGACAAGACAGCTAAAGACTACAATATCGAAGGTGGTTCTGTTCTTCACCTTGTTCTTGCACTTAGGGGTGGCAGACTCTAGGTTGCACTTAACTTGGTGAAAACTTAGATGTCCTGTCTTTATTCCATGAACTTGGGATGAACATTTCTTCTCTTCCCTTTTTTGGTGATGTACGATTGGAATAAACAGGAAAAACTTGTGGTTGGTTGAACATTTTGTGATTGTCTGCACCTTATGTTAAATTCAGGTTTAATTTGCTAATATGTAGTCTCTTTTTTTTCCCCATTTCTTGCTGCAATGTGAGGAGGCTATTACTCCCT
| Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch10
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mRNA PGSC0003DMT400029234
mRNA PGSC0003DMT400029234
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| Ontology terms | None | terms associated with this mRNA |
cDNA sequence
cDNA sequence
| spliced cDNA sequence, including UTRs |
>PGSC0003DMT400029234 NEDD8 RUB2
TGTTTTTAGGGCCAATAGAATAGAACAAATAAATAGGGTTCCAATTCTTTTTCCTTATTATTTCATCCGAATTTTTGTGCTTAATAAACTTAGCGTAAAGGGAACGAGCTGTTTCTGTAGGAGCCAAATCGATCGATCGATCGATCAATCAATCAATCATGCAGATCTTTGTGAAAACCCTAACCGGAAAGACCATCACCCTCGAAGTTGAGAGCAGCGATACCATTGACAATGTCAAGGCCAAAATTCAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAATTGGAAGATGGTCGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCATCTTGTTCTGAGGCTCAGGGGAGGAACCATGATCAAGGTGAAGACTCTCACTGGAAAGGAAATTGAGATCGACATTGAACCCACTGACACCATTGATCGTATTAAGGAGCGTGTTGAGGAGAAAGAAGGAATACCTCCTGTGCAGCAAAGGCTTATATACGCTGGAAAACAGCTAGCAGATGACAAGACAGCTAAAGACTACAATATCGAAGGTGGTTCTGTTCTTCACCTTGTTCTTGCACTTAGGGGTGGCAGACTCTAGGTTGCACTTAACTTGGTGAAAACTTAGATGTCCTGTCTTTATTCCATGAACTTGGGATGAACATTTCTTCTCTTCCCTTTTTTGGTGATGTACGATTGGAATAAACAGGAAAAACTTGTGGTTGGTTGAACATTTTGTGATTGTCTGCACCTTATGTTAAATTCAGGTTTAATTTGCTAATATGTAGTCTCTTTTTTTTCCCCATTTCTTGCTGCAATGTGAGGAGGCTATTACTCCCT
TGTTTTTAGGGCCAATAGAATAGAACAAATAAATAGGGTTCCAATTCTTTTTCCTTATTATTTCATCCGAATTTTTGTGCTTAATAAACTTAGCGTAAAGGGAACGAGCTGTTTCTGTAGGAGCCAAATCGATCGATCGATCGATCAATCAATCAATCATGCAGATCTTTGTGAAAACCCTAACCGGAAAGACCATCACCCTCGAAGTTGAGAGCAGCGATACCATTGACAATGTCAAGGCCAAAATTCAGGATAAAGAAGGCATACCTCCTGATCAGCAGAGACTGATTTTTGCTGGGAAACAATTGGAAGATGGTCGAACCCTGGCTGATTACAACATTCAGAAAGAATCAACTCTTCATCTTGTTCTGAGGCTCAGGGGAGGAACCATGATCAAGGTGAAGACTCTCACTGGAAAGGAAATTGAGATCGACATTGAACCCACTGACACCATTGATCGTATTAAGGAGCGTGTTGAGGAGAAAGAAGGAATACCTCCTGTGCAGCAAAGGCTTATATACGCTGGAAAACAGCTAGCAGATGACAAGACAGCTAAAGACTACAATATCGAAGGTGGTTCTGTTCTTCACCTTGTTCTTGCACTTAGGGGTGGCAGACTCTAGGTTGCACTTAACTTGGTGAAAACTTAGATGTCCTGTCTTTATTCCATGAACTTGGGATGAACATTTCTTCTCTTCCCTTTTTTGGTGATGTACGATTGGAATAAACAGGAAAAACTTGTGGTTGGTTGAACATTTTGTGATTGTCTGCACCTTATGTTAAATTCAGGTTTAATTTGCTAATATGTAGTCTCTTTTTTTTCCCCATTTCTTGCTGCAATGTGAGGAGGCTATTACTCCCT
Protein sequence
Protein sequence
| translated polypeptide sequence |
>PGSC0003DMT400029234 NEDD8 RUB2
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGRL*
MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIPPVQQRLIYAGKQLADDKTAKDYNIEGGSVLHLVLALRGGRL*
Gene model matches
Gene model matches
|
SGN Unigenes
SGN Unigenes
| [Associate new unigene] |
Unigene ID:
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GenBank accessions
GenBank accessions
| [Associate new genbank sequence] |
| Other genome matches | None |
Literature annotations [2]
Literature annotations [2]
| [Associate publication] [Matching publications] |
Expression of stress-responsive ubiquitin genes in potato tubers.
Plant molecular biology (1992)
Show / hide abstract
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The stress-induced expression of four different ubiquitin-encoding cDNAs was characterized in potato tuber tissue. The four clones exhibited differences in both structure and expression. The first cDNA encoded a single ubiquitin unit fused to an 80 amino acid ribosomal extension protein identical to the extension protein from tomato. Accumulation of the fusion transcript was induced by injury or ethylene, but not by heat shock. The three remaining ubiquitin cDNAs encoded polyubiquitins with 6 to 7 ubiquitin repeats. The first polyubiquitin gene was induced by injury, heat, or ethylene treatments. The second was induced also by injury or heat, with limited ethylene-dependent accumulation of transcript. Transcript levels of the third polyubiquitin gene were highest in control tubers and decreased markedly with injury, heat shock, or ethylene treatment. The data demonstrate the independent regulation of the different members of the ubiquitin gene family in response to stress and exogenous ethylene.
Garbarino, JE. Rockhold, DR. Belknap, WR.
Plant molecular biology.
1992.
20(2).
235-44.
Isolation of a polyubiquitin promoter and its expression in transgenic potato plants.
Plant physiology (1995)
Show / hide abstract
Show / hide abstract
A polyubiquitin clone (ubi7) was isolated from a potato (Solanum tuberosum) genomic library using a copy-specific probe from a stress-induced ubiquitin cDNA. The genomic clone contained a 569-bp intron immediately 5' to the initiation codon for the first ubiquitin-coding unit. Two chimeric beta-glucuronidase (GUS) fusion transgenes were introduced into potato. The first contained GUS fused to a 1156-bp promoter fragment containing only 5' flanking and 5' untranslated sequences from ubi7. The second transgene contained GUS translationally fused to the carboxy terminus of the first ubiquitin-coding unit and thus included the intron present in the 5' untranslated region of the polyubiquitin gene. Both ubi7-GUS transgenes were activated by wounding in tuber tissue and in leaves by application of exogenous methyl jasmonate. They were also expressed constitutively in the potato tuber peel (outer 1-2 mm). Both transgenes were actively expressed in mature leaves. Exceptionally high levels of expression were observed in senescent leaves. Transgenic clones containing the ubi7 intron and the first ubiquitin-coding unit showed GUS expression levels at least 10 times higher than clones containing GUS fused to the intronless promoter.
Garbarino, JE. Oosumi, T. Belknap, WR.
Plant physiology.
1995.
109(4).
1371-8.
Ontology annotations (5)
Ontology annotations (5)
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