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Potato locus S-adenosylmethionine decarboxylase
Locus details | Download GMOD XML | Note to Editors | Annotation guidelines |
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Registry name: | None | [Associate registry name] |
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![]() ![]() | [Associate accession] |
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![]() ![]() | unprocessed genomic sequence region underlying this gene |
>PGSC0003DMG400007518 PGSC_DMv3_219_ch05:1292833..1296323
GATTTTTGTGTAGGATTTGGAAAGTTTGTGATTCGTTTGGGAAAAGTTGGGTTTGGAACAAACATCAAAATTTTGTATTGTAAGTATCACGATCTTTGTTTCATTTTGAAATGTTTATGAAAACTGTTCAAATTTACGCATTTTTTTTAATCTTATGGATATGATTTATGGTGAATGTTGTTGATATGATTAGATTTTTGTATTTTATGAGTAAGGAATTTGTGTTTTTAAAAATAGATCTGAGTTGTTATAATTGTTTAATGATTGTTTTCCGAATTATTTGTTCTTTTTTGAAGACCTTTTTGGCTATGATTGTCTTGCTTTATGGTGAAGGTTGTTGTTGATATGATTGATTAGCTTTTTGTGTATGAAAATTATGTTATTTCTGTTTTGTTAAAGAAGGATCTGTGATTGTGATGGGAATGATGGTATAGTAAAGGTCATTATTTGATAAATAGGGTCATTTTCTTCAGAATTTAAAACAAAATTATAGTTGGGGAAAGCTTGGGATCTGAGATATATGGCTTTTTTCTTTTGTTATTTTCCTGCTTATTCCTGAAAGATTTTATCTTTATGAAATTGAGAAATTGAGCCACAATTGTTTATTTGTTGTGGAGGCATTCCAAAGATCAAATTTTTCTGGGTAAACAGTAGGACCCACTTTGGCAGCTTTACTTGACCTCCGTATTTTTTTAGGTTAACTTTTTTGAATATATATGTAAGTGAGATTTGATTTGTCAGTTTCCACGGTTACGTGAGTCTGCTCCTAATTGGATGACTTGACTTGTTTCATATTGGAGAACTTCTACAACCAAAAGCTTCTGGTCTGTTTTCCTTATTTTAAAATTCAAAGCAGTAATATTGATAAAGTTTCTGAATCTAAGGCTCTTTTTAACTAATGTTAATCTTAATTGAATGGTTGTTACATGTATATTTGATCATAGGTTCATGAGCCAATGGCTTTGCCATATGGATTATGGTGATGTCCTTTTGAATTGCTCAAAAATTTTCGTAGTTCTTCCTGGGGATAGCTCAGAAAATTCATTCTGCTTATCCCAATTTGGAATGTTAAGCTGCATATTATAATCTTCAGTCTTCTCAATCTTTTTAATGGAAGAGTCACCTTGAGTGGTCTTCTTTAGTTGTACTAATCTCCAGCTCCTATTTATTGGGTGTGTCTGTCTGATCATGACATGAAGCACCCAATTTTTGGAAATAATTTTGTATCTGTAGCATTCACATGGTTACTTTATGGATAGTTGACACAAAGGCTTGTTAAATTGTATTTTTTTCTAGGTATTTTCTGAGTTCTGTAGTTATGTTTTCTTTTGCACATGATTTGGTTCCTGCTAATCCTTATATCACTTGATCTGGTAGCAAGACTGTCTATTTTCATTAATCATCCATCAACTTTAATTATCTCATGAAGGAAACCTTCCCCATCCAAAAGTTTTATCTTTCTGTAGATGGTATATTAATTATCTGTTGTCAAAATCATTGGTTGCCTAAATATTGATGTTTACTTTTCACTATATTAGAATTCTATGGCTGTTATCTGCAGTTCCTTCTTGGGGTTTCAGTTTTCTTATTGCCTAGCTGTGCATCCACTGGATTTAACTTACAAGTTGTTGGCATGTACAGGTGAATGATCTAATGGAGTCAAAAGGTGGTAAAAAGAAGTCTAGTAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCGGCTACAGCATTGAAGACGTTCGACCAAACGGTGGAGTGAAGAAGTTCAGATCAGCTGCTTACTCCAACGTAAGTATCTGGATCTCATTTGTTTTAAAATTCCATAAGCCATAAAGAATGAGAGGTGAGAATATTGTAACTGACACTTCTCTTTTTTCTACCTTTGTATGCAGTGCGCGCGCAAACCATCCTGATATTTCCTAAACTTCCTTCCTTAAAGCGTCAATAGACGCAACCAAAAAAAAAAACAAAAAAAAAATTTCTTCTTTCAGTTTCTTCTTTTGTCAAGCCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTGCACTCATTGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGCTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTTTGAAGGTTTTGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCTCAAAGGCACAGTTGGATGAAATTCTCGGACCAGCTGAGTGCACCATTGTTGATAACCTATCAAATGACTATGTTGATTCCTATGTGCTGTCTGAGTCGAGCCTCTTCGTTTATTCTTACAAGATAATCATCAAAACATGTGGCACCACAAAGTTGCTTCTTGCAATTCCTCCCATTCTAAGGTTGGCTGAGACCTTGTCTCTCAAAGTACAAGACGTGAGGTATACCCGTGGGAGCTTCATTTTCCCTGGTGCTCAATCGTTTCCTCACCGCCACTTTTCTGAAGAAGTTGCTGTCCTCGATGGATATTTTGGAAAGCTTGCTGCCGGTAGCAAGGCTGTGATTATGGGCAGTCCCAACAAAACACAGAAATGGCATGTTTACTCTGCCTCAGCTGGGTCTGTTCAGTCTAATGACCCTGTTTACACTCTTGAGATGTGTATGACTGGTTTGGACAGGGAGAAGGCATCTGTCTTCTACAAAACTGAAGAAAGCTCGGCTGCTCACATGACTGTTAGATCTGGCATAAGGAAGATCCTCCCCAAGTCTGAGATATGCGATTTTGAGTTTGAACCCTGTGGTTATTCTATGAATTCTATTGAAGGAGCTGCTGTTTCAACCATTCACATTACCCCTGAGGACGGCTTTAGCTATGCCAGCTTTGAATCTGTTGGATATAATCCTAAAACCATGGAGTTGGGTCCCCTGGTTGAGAGAGTGCTTGCATGTTTTGAGCCAGCTGAGTTCTCTATTGCTCTGCATGCTGATGTTGCTACCAAGTTACTGGAGCGTGTTTGCTCTGTTGATGTCAAGGGCTACTCTCTTGCTGAGTGGAGTCCAGAAGAGTTTGGCGAAGGCGGTTCCATTGTCTACCAGAAGTTCACTAGAACTCCTTACTGTGAATCTCCCAAGTCCGTTCTGAAGGGCTGCTGGAAGGAGGAAGAGAAAGAAGGAAAGGAGTAGTGTTGTCTTGAGGGTCGTATTGTTGTTTTTGTTTCAGTGTCTGTCGTTTGCTCATGTTTTCGTTGTTTCTCAGAATAATGGACTTATACGTCCAAACTTGTGTCTGTCGAATTTGCAACGTCTGTGTGCAAATTCTGAACTAGTCCTGCCTTTTGGTGTTCCACCAGAAGCCTTTATGTGTCTGCATTTTGAATTGTGTCATGTTGTTGGTCTCTGTTCCGTTGCGTCTAATAAAATTGTGTTTGTTATGTGTAATTCTTGGCCTCTCCTTTATTCAAGATTGCAACTGCTTGTTCC
GATTTTTGTGTAGGATTTGGAAAGTTTGTGATTCGTTTGGGAAAAGTTGGGTTTGGAACAAACATCAAAATTTTGTATTGTAAGTATCACGATCTTTGTTTCATTTTGAAATGTTTATGAAAACTGTTCAAATTTACGCATTTTTTTTAATCTTATGGATATGATTTATGGTGAATGTTGTTGATATGATTAGATTTTTGTATTTTATGAGTAAGGAATTTGTGTTTTTAAAAATAGATCTGAGTTGTTATAATTGTTTAATGATTGTTTTCCGAATTATTTGTTCTTTTTTGAAGACCTTTTTGGCTATGATTGTCTTGCTTTATGGTGAAGGTTGTTGTTGATATGATTGATTAGCTTTTTGTGTATGAAAATTATGTTATTTCTGTTTTGTTAAAGAAGGATCTGTGATTGTGATGGGAATGATGGTATAGTAAAGGTCATTATTTGATAAATAGGGTCATTTTCTTCAGAATTTAAAACAAAATTATAGTTGGGGAAAGCTTGGGATCTGAGATATATGGCTTTTTTCTTTTGTTATTTTCCTGCTTATTCCTGAAAGATTTTATCTTTATGAAATTGAGAAATTGAGCCACAATTGTTTATTTGTTGTGGAGGCATTCCAAAGATCAAATTTTTCTGGGTAAACAGTAGGACCCACTTTGGCAGCTTTACTTGACCTCCGTATTTTTTTAGGTTAACTTTTTTGAATATATATGTAAGTGAGATTTGATTTGTCAGTTTCCACGGTTACGTGAGTCTGCTCCTAATTGGATGACTTGACTTGTTTCATATTGGAGAACTTCTACAACCAAAAGCTTCTGGTCTGTTTTCCTTATTTTAAAATTCAAAGCAGTAATATTGATAAAGTTTCTGAATCTAAGGCTCTTTTTAACTAATGTTAATCTTAATTGAATGGTTGTTACATGTATATTTGATCATAGGTTCATGAGCCAATGGCTTTGCCATATGGATTATGGTGATGTCCTTTTGAATTGCTCAAAAATTTTCGTAGTTCTTCCTGGGGATAGCTCAGAAAATTCATTCTGCTTATCCCAATTTGGAATGTTAAGCTGCATATTATAATCTTCAGTCTTCTCAATCTTTTTAATGGAAGAGTCACCTTGAGTGGTCTTCTTTAGTTGTACTAATCTCCAGCTCCTATTTATTGGGTGTGTCTGTCTGATCATGACATGAAGCACCCAATTTTTGGAAATAATTTTGTATCTGTAGCATTCACATGGTTACTTTATGGATAGTTGACACAAAGGCTTGTTAAATTGTATTTTTTTCTAGGTATTTTCTGAGTTCTGTAGTTATGTTTTCTTTTGCACATGATTTGGTTCCTGCTAATCCTTATATCACTTGATCTGGTAGCAAGACTGTCTATTTTCATTAATCATCCATCAACTTTAATTATCTCATGAAGGAAACCTTCCCCATCCAAAAGTTTTATCTTTCTGTAGATGGTATATTAATTATCTGTTGTCAAAATCATTGGTTGCCTAAATATTGATGTTTACTTTTCACTATATTAGAATTCTATGGCTGTTATCTGCAGTTCCTTCTTGGGGTTTCAGTTTTCTTATTGCCTAGCTGTGCATCCACTGGATTTAACTTACAAGTTGTTGGCATGTACAGGTGAATGATCTAATGGAGTCAAAAGGTGGTAAAAAGAAGTCTAGTAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCGGCTACAGCATTGAAGACGTTCGACCAAACGGTGGAGTGAAGAAGTTCAGATCAGCTGCTTACTCCAACGTAAGTATCTGGATCTCATTTGTTTTAAAATTCCATAAGCCATAAAGAATGAGAGGTGAGAATATTGTAACTGACACTTCTCTTTTTTCTACCTTTGTATGCAGTGCGCGCGCAAACCATCCTGATATTTCCTAAACTTCCTTCCTTAAAGCGTCAATAGACGCAACCAAAAAAAAAAACAAAAAAAAAATTTCTTCTTTCAGTTTCTTCTTTTGTCAAGCCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTGCACTCATTGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGCTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTTTGAAGGTTTTGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCTCAAAGGCACAGTTGGATGAAATTCTCGGACCAGCTGAGTGCACCATTGTTGATAACCTATCAAATGACTATGTTGATTCCTATGTGCTGTCTGAGTCGAGCCTCTTCGTTTATTCTTACAAGATAATCATCAAAACATGTGGCACCACAAAGTTGCTTCTTGCAATTCCTCCCATTCTAAGGTTGGCTGAGACCTTGTCTCTCAAAGTACAAGACGTGAGGTATACCCGTGGGAGCTTCATTTTCCCTGGTGCTCAATCGTTTCCTCACCGCCACTTTTCTGAAGAAGTTGCTGTCCTCGATGGATATTTTGGAAAGCTTGCTGCCGGTAGCAAGGCTGTGATTATGGGCAGTCCCAACAAAACACAGAAATGGCATGTTTACTCTGCCTCAGCTGGGTCTGTTCAGTCTAATGACCCTGTTTACACTCTTGAGATGTGTATGACTGGTTTGGACAGGGAGAAGGCATCTGTCTTCTACAAAACTGAAGAAAGCTCGGCTGCTCACATGACTGTTAGATCTGGCATAAGGAAGATCCTCCCCAAGTCTGAGATATGCGATTTTGAGTTTGAACCCTGTGGTTATTCTATGAATTCTATTGAAGGAGCTGCTGTTTCAACCATTCACATTACCCCTGAGGACGGCTTTAGCTATGCCAGCTTTGAATCTGTTGGATATAATCCTAAAACCATGGAGTTGGGTCCCCTGGTTGAGAGAGTGCTTGCATGTTTTGAGCCAGCTGAGTTCTCTATTGCTCTGCATGCTGATGTTGCTACCAAGTTACTGGAGCGTGTTTGCTCTGTTGATGTCAAGGGCTACTCTCTTGCTGAGTGGAGTCCAGAAGAGTTTGGCGAAGGCGGTTCCATTGTCTACCAGAAGTTCACTAGAACTCCTTACTGTGAATCTCCCAAGTCCGTTCTGAAGGGCTGCTGGAAGGAGGAAGAGAAAGAAGGAAAGGAGTAGTGTTGTCTTGAGGGTCGTATTGTTGTTTTTGTTTCAGTGTCTGTCGTTTGCTCATGTTTTCGTTGTTTCTCAGAATAATGGACTTATACGTCCAAACTTGTGTCTGTCGAATTTGCAACGTCTGTGTGCAAATTCTGAACTAGTCCTGCCTTTTGGTGTTCCACCAGAAGCCTTTATGTGTCTGCATTTTGAATTGTGTCATGTTGTTGGTCTCTGTTCCGTTGCGTCTAATAAAATTGTGTTTGTTATGTGTAATTCTTGGCCTCTCCTTTATTCAAGATTGCAACTGCTTGTTCC
Download sequence region |
Get flanking sequences on PGSC_DMv3_219_ch05
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Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400019451 S-adenosylmethionine decarboxylase beta chain
GATTTTTGTGTAGGATTTGGAAAGTTTGTGATTCGTTTGGGAAAAGTTGGGTTTGGAACAAACATCAAAATTTTGTATTGTGAATGATCTAATGGAGTCAAAAGGTGGTAAAAAGAAGTCTAGTAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCGGCTACAGCATTGAAGACGTTCGACCAAACGGTGGAGTGAAGAAGTTCAGATCAGCTGCTTACTCCAACTGCGCGCGCAAACCATCCTGATATTTCCTAAACTTCCTTCCTTAAAGCGTCAATAGACGCAACCAAAAAAAAAAACAAAAAAAAAATTTCTTCTTTCAGTTTCTTCTTTTGTCAAGCCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTGCACTCATTGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGCTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTTTGAAGGTTTTGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCTCAAAGGCACAGTTGGATGAAATTCTCGGACCAGCTGAGTGCACCATTGTTGATAACCTATCAAATGACTATGTTGATTCCTATGTGCTGTCTGAGTCGAGCCTCTTCGTTTATTCTTACAAGATAATCATCAAAACATGTGGCACCACAAAGTTGCTTCTTGCAATTCCTCCCATTCTAAGGTTGGCTGAGACCTTGTCTCTCAAAGTACAAGACGTGAGGTATACCCGTGGGAGCTTCATTTTCCCTGGTGCTCAATCGTTTCCTCACCGCCACTTTTCTGAAGAAGTTGCTGTCCTCGATGGATATTTTGGAAAGCTTGCTGCCGGTAGCAAGGCTGTGATTATGGGCAGTCCCAACAAAACACAGAAATGGCATGTTTACTCTGCCTCAGCTGGGTCTGTTCAGTCTAATGACCCTGTTTACACTCTTGAGATGTGTATGACTGGTTTGGACAGGGAGAAGGCATCTGTCTTCTACAAAACTGAAGAAAGCTCGGCTGCTCACATGACTGTTAGATCTGGCATAAGGAAGATCCTCCCCAAGTCTGAGATATGCGATTTTGAGTTTGAACCCTGTGGTTATTCTATGAATTCTATTGAAGGAGCTGCTGTTTCAACCATTCACATTACCCCTGAGGACGGCTTTAGCTATGCCAGCTTTGAATCTGTTGGATATAATCCTAAAACCATGGAGTTGGGTCCCCTGGTTGAGAGAGTGCTTGCATGTTTTGAGCCAGCTGAGTTCTCTATTGCTCTGCATGCTGATGTTGCTACCAAGTTACTGGAGCGTGTTTGCTCTGTTGATGTCAAGGGCTACTCTCTTGCTGAGTGGAGTCCAGAAGAGTTTGGCGAAGGCGGTTCCATTGTCTACCAGAAGTTCACTAGAACTCCTTACTGTGAATCTCCCAAGTCCGTTCTGAAGGGCTGCTGGAAGGAGGAAGAGAAAGAAGGAAAGGAGTAGTGTTGTCTTGAGGGTCGTATTGTTGTTTTTGTTTCAGTGTCTGTCGTTTGCTCATGTTTTCGTTGTTTCTCAGAATAATGGACTTATACGTCCAAACTTGTGTCTGTCGAATTTGCAACGTCTGTGTGCAAATTCTGAACTAGTCCTGCCTTTTGGTGTTCCACCAGAAGCCTTTATGTGTCTGCATTTTGAATTGTGTCATGTTGTTGGTCTCTGTTCCGTTGCGTCTAATAAAATTGTGTTTGTTATGTGTAATTCTTGGCCTCTCCTTTATTCAAGATTGCAACTGCTTGTTCC
GATTTTTGTGTAGGATTTGGAAAGTTTGTGATTCGTTTGGGAAAAGTTGGGTTTGGAACAAACATCAAAATTTTGTATTGTGAATGATCTAATGGAGTCAAAAGGTGGTAAAAAGAAGTCTAGTAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCGGCTACAGCATTGAAGACGTTCGACCAAACGGTGGAGTGAAGAAGTTCAGATCAGCTGCTTACTCCAACTGCGCGCGCAAACCATCCTGATATTTCCTAAACTTCCTTCCTTAAAGCGTCAATAGACGCAACCAAAAAAAAAAACAAAAAAAAAATTTCTTCTTTCAGTTTCTTCTTTTGTCAAGCCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTGCACTCATTGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGCTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTTTGAAGGTTTTGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCTCAAAGGCACAGTTGGATGAAATTCTCGGACCAGCTGAGTGCACCATTGTTGATAACCTATCAAATGACTATGTTGATTCCTATGTGCTGTCTGAGTCGAGCCTCTTCGTTTATTCTTACAAGATAATCATCAAAACATGTGGCACCACAAAGTTGCTTCTTGCAATTCCTCCCATTCTAAGGTTGGCTGAGACCTTGTCTCTCAAAGTACAAGACGTGAGGTATACCCGTGGGAGCTTCATTTTCCCTGGTGCTCAATCGTTTCCTCACCGCCACTTTTCTGAAGAAGTTGCTGTCCTCGATGGATATTTTGGAAAGCTTGCTGCCGGTAGCAAGGCTGTGATTATGGGCAGTCCCAACAAAACACAGAAATGGCATGTTTACTCTGCCTCAGCTGGGTCTGTTCAGTCTAATGACCCTGTTTACACTCTTGAGATGTGTATGACTGGTTTGGACAGGGAGAAGGCATCTGTCTTCTACAAAACTGAAGAAAGCTCGGCTGCTCACATGACTGTTAGATCTGGCATAAGGAAGATCCTCCCCAAGTCTGAGATATGCGATTTTGAGTTTGAACCCTGTGGTTATTCTATGAATTCTATTGAAGGAGCTGCTGTTTCAACCATTCACATTACCCCTGAGGACGGCTTTAGCTATGCCAGCTTTGAATCTGTTGGATATAATCCTAAAACCATGGAGTTGGGTCCCCTGGTTGAGAGAGTGCTTGCATGTTTTGAGCCAGCTGAGTTCTCTATTGCTCTGCATGCTGATGTTGCTACCAAGTTACTGGAGCGTGTTTGCTCTGTTGATGTCAAGGGCTACTCTCTTGCTGAGTGGAGTCCAGAAGAGTTTGGCGAAGGCGGTTCCATTGTCTACCAGAAGTTCACTAGAACTCCTTACTGTGAATCTCCCAAGTCCGTTCTGAAGGGCTGCTGGAAGGAGGAAGAGAAAGAAGGAAAGGAGTAGTGTTGTCTTGAGGGTCGTATTGTTGTTTTTGTTTCAGTGTCTGTCGTTTGCTCATGTTTTCGTTGTTTCTCAGAATAATGGACTTATACGTCCAAACTTGTGTCTGTCGAATTTGCAACGTCTGTGTGCAAATTCTGAACTAGTCCTGCCTTTTGGTGTTCCACCAGAAGCCTTTATGTGTCTGCATTTTGAATTGTGTCATGTTGTTGGTCTCTGTTCCGTTGCGTCTAATAAAATTGTGTTTGTTATGTGTAATTCTTGGCCTCTCCTTTATTCAAGATTGCAACTGCTTGTTCC
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400019451 S-adenosylmethionine decarboxylase beta chain
MEMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPNKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYNPKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCWKEEEKEGKE*
MEMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPNKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYNPKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCWKEEEKEGKE*
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Ontology terms | None | terms associated with this mRNA |
![]() ![]() | spliced cDNA sequence, including UTRs |
>PGSC0003DMT400019450 S-adenosylmethionine decarboxylase beta chain
CCACTGGATTTAACTTACAAGTTGTTGGCATGTACAGGTGAATGATCTAATGGAGTCAAAAGGTGGTAAAAAGAAGTCTAGTAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCGGCTACAGCATTGAAGACGTTCGACCAAACGGTGGAGTGAAGAAGTTCAGATCAGCTGCTTACTCCAACTGCGCGCGCAAACCATCCTGATATTTCCTAAACTTCCTTCCTTAAAGCGTCAATAGACGCAACCAAAAAAAAAAACAAAAAAAAAATTTCTTCTTTCAGTTTCTTCTTTTGTCAAGCCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTGCACTCATTGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGCTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTTTGAAGGTTTTGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCTCAAAGGCACAGTTGGATGAAATTCTCGGACCAGCTGAGTGCACCATTGTTGATAACCTATCAAATGACTATGTTGATTCCTATGTGCTGTCTGAGTCGAGCCTCTTCGTTTATTCTTACAAGATAATCATCAAAACATGTGGCACCACAAAGTTGCTTCTTGCAATTCCTCCCATTCTAAGGTTGGCTGAGACCTTGTCTCTCAAAGTACAAGACGTGAGGTATACCCGTGGGAGCTTCATTTTCCCTGGTGCTCAATCGTTTCCTCACCGCCACTTTTCTGAAGAAGTTGCTGTCCTCGATGGATATTTTGGAAAGCTTGCTGCCGGTAGCAAGGCTGTGATTATGGGCAGTCCCAACAAAACACAGAAATGGCATGTTTACTCTGCCTCAGCTGGGTCTGTTCAGTCTAATGACCCTGTTTACACTCTTGAGATGTGTATGACTGGTTTGGACAGGGAGAAGGCATCTGTCTTCTACAAAACTGAAGAAAGCTCGGCTGCTCACATGACTGTTAGATCTGGCATAAGGAAGATCCTCCCCAAGTCTGAGATATGCGATTTTGAGTTTGAACCCTGTGGTTATTCTATGAATTCTATTGAAGGAGCTGCTGTTTCAACCATTCACATTACCCCTGAGGACGGCTTTAGCTATGCCAGCTTTGAATCTGTTGGATATAATCCTAAAACCATGGAGTTGGGTCCCCTGGTTGAGAGAGTGCTTGCATGTTTTGAGCCAGCTGAGTTCTCTATTGCTCTGCATGCTGATGTTGCTACCAAGTTACTGGAGCGTGTTTGCTCTGTTGATGTCAAGGGCTACTCTCTTGCTGAGTGGAGTCCAGAAGAGTTTGGCGAAGGCGGTTCCATTGTCTACCAGAAGTTCACTAGAACTCCTTACTGTGAATCTCCCAAGTCCGTTCTGAAGGGCTGCTGGAAGGAGGAAGAGAAAGAAGGAAAGGAGTAGTGTTGTCTTGAGGGTCGTATTGTTGTTTTTGTTTCAGTGTCTGTCGTTTGCTCATGTTTTCGTTGTTTCTCAGAATAATGGACTTATACGTCCAAACTTGTGTCTGTCGAATTTGCAACGTCTGTGTGCAAATTCTGAACTAGTCCTGCCTTTTGGTGTTCCACCAGAAGCCTTTATGTGTCTGCATTTTGAATTGTGTCATGTTGTTGGTCTCTGTTCCGTTGCGTCTAATAAAATTGTGTTTGTTATGTGTAATTCTTGGCCTCTCCTTTATTCAAGATTGCAACTGCTTGTTCC
CCACTGGATTTAACTTACAAGTTGTTGGCATGTACAGGTGAATGATCTAATGGAGTCAAAAGGTGGTAAAAAGAAGTCTAGTAGTAGTAGTTCCTTATTTTACGAAGCTCCCCTCGGCTACAGCATTGAAGACGTTCGACCAAACGGTGGAGTGAAGAAGTTCAGATCAGCTGCTTACTCCAACTGCGCGCGCAAACCATCCTGATATTTCCTAAACTTCCTTCCTTAAAGCGTCAATAGACGCAACCAAAAAAAAAAACAAAAAAAAAATTTCTTCTTTCAGTTTCTTCTTTTGTCAAGCCCTCACTCCTTTTCTTCCTTCTTTTACTACTTCCTGCTTTTGCACTCATTGCTTTGAACATTTTCCGCTTTAACTTCCTTTGCTGCTGTGAACTTTTTCATAATGGAAATGGACTTGCCAGTTTCTGCCATTGGTTTTGAAGGTTTTGAAAAGAGGCTCGAAATTTCTTTCGTCGAGCCTGGTCTGTTTGCTGATCCTAATGGAAAAGGACTTCGATCTCTCTCAAAGGCACAGTTGGATGAAATTCTCGGACCAGCTGAGTGCACCATTGTTGATAACCTATCAAATGACTATGTTGATTCCTATGTGCTGTCTGAGTCGAGCCTCTTCGTTTATTCTTACAAGATAATCATCAAAACATGTGGCACCACAAAGTTGCTTCTTGCAATTCCTCCCATTCTAAGGTTGGCTGAGACCTTGTCTCTCAAAGTACAAGACGTGAGGTATACCCGTGGGAGCTTCATTTTCCCTGGTGCTCAATCGTTTCCTCACCGCCACTTTTCTGAAGAAGTTGCTGTCCTCGATGGATATTTTGGAAAGCTTGCTGCCGGTAGCAAGGCTGTGATTATGGGCAGTCCCAACAAAACACAGAAATGGCATGTTTACTCTGCCTCAGCTGGGTCTGTTCAGTCTAATGACCCTGTTTACACTCTTGAGATGTGTATGACTGGTTTGGACAGGGAGAAGGCATCTGTCTTCTACAAAACTGAAGAAAGCTCGGCTGCTCACATGACTGTTAGATCTGGCATAAGGAAGATCCTCCCCAAGTCTGAGATATGCGATTTTGAGTTTGAACCCTGTGGTTATTCTATGAATTCTATTGAAGGAGCTGCTGTTTCAACCATTCACATTACCCCTGAGGACGGCTTTAGCTATGCCAGCTTTGAATCTGTTGGATATAATCCTAAAACCATGGAGTTGGGTCCCCTGGTTGAGAGAGTGCTTGCATGTTTTGAGCCAGCTGAGTTCTCTATTGCTCTGCATGCTGATGTTGCTACCAAGTTACTGGAGCGTGTTTGCTCTGTTGATGTCAAGGGCTACTCTCTTGCTGAGTGGAGTCCAGAAGAGTTTGGCGAAGGCGGTTCCATTGTCTACCAGAAGTTCACTAGAACTCCTTACTGTGAATCTCCCAAGTCCGTTCTGAAGGGCTGCTGGAAGGAGGAAGAGAAAGAAGGAAAGGAGTAGTGTTGTCTTGAGGGTCGTATTGTTGTTTTTGTTTCAGTGTCTGTCGTTTGCTCATGTTTTCGTTGTTTCTCAGAATAATGGACTTATACGTCCAAACTTGTGTCTGTCGAATTTGCAACGTCTGTGTGCAAATTCTGAACTAGTCCTGCCTTTTGGTGTTCCACCAGAAGCCTTTATGTGTCTGCATTTTGAATTGTGTCATGTTGTTGGTCTCTGTTCCGTTGCGTCTAATAAAATTGTGTTTGTTATGTGTAATTCTTGGCCTCTCCTTTATTCAAGATTGCAACTGCTTGTTCC
![]() ![]() | translated polypeptide sequence |
>PGSC0003DMT400019450 S-adenosylmethionine decarboxylase beta chain
MEMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPNKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYNPKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCWKEEEKEGKE*
MEMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSKAQLDEILGPAECTIVDNLSNDYVDSYVLSESSLFVYSYKIIIKTCGTTKLLLAIPPILRLAETLSLKVQDVRYTRGSFIFPGAQSFPHRHFSEEVAVLDGYFGKLAAGSKAVIMGSPNKTQKWHVYSASAGSVQSNDPVYTLEMCMTGLDREKASVFYKTEESSAAHMTVRSGIRKILPKSEICDFEFEPCGYSMNSIEGAAVSTIHITPEDGFSYASFESVGYNPKTMELGPLVERVLACFEPAEFSIALHADVATKLLERVCSVDVKGYSLAEWSPEEFGEGGSIVYQKFTRTPYCESPKSVLKGCWKEEEKEGKE*
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![]() ![]() | [Associate new unigene] |
Unigene ID:
[loading...]
![]() ![]() | [Associate new genbank sequence] |
Other genome matches | None |
![]() ![]() | [Associate publication] [Matching publications] |
Expression and sequence analysis of cDNAs induced during the early stages of tuberisation in different organs of the potato plant (Solanum tuberosum L.).
Plant molecular biology (1992)
Show / hide abstract
Show / hide abstract
cDNA clones of two genes (TUB8 and TUB13) which show a 25-30-fold increase in transcript in the stolon tip during the early stages of tuberisation, have been isolated by differential screening. These genes are also expressed in leaves, stems and roots and the expression pattern in these organs changes on tuberisation. Southern analysis shows homologous sequences in the non-tuberising wild type potato species Solanum brevidens and in Lycopersicon esculentum (tomato). Sequence analysis reveals a high degree of similarity between the TUB13 cDNA, and a human S-adenosylmethionine decarboxylase gene. The predicted TUB8 peptide sequence shows several repeats of alanine, glutamate and proline which suggests a structural role for the encoded protein.
Taylor, MA. Arif, SA. Kumar, A. Davies, HV. Scobie, LA. Pearce, SR. Flavell, AJ.
Plant molecular biology.
1992.
20(4).
641-51.
Characterisation of the S-adenosylmethionine decarboxylase (SAMDC) gene of potato.
Plant molecular biology (1994)
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S-adenosylmethionine decarboxylase (SAMDC) is involved in the biosynthesis of the polyamines, spermidine and spermine. Recently, we reported the isolation of a putative cDNA clone of the SAMDC clone of potato (Plant Mol Biol 20; 641-651). In order to confirm that the potato genes does encode SAMDC, a complementation experiment with a yeast strain that possesses a null mutation in the SAMDC gene was performed. The yeast strain contains a deletion-insertion mutation in the SAMDC gene and has an absolute requirement for the addition of exogenous spermidine for growth. When the full-length potato cDNA was expressed in the mutant yeast strain there was no longer a requirement for exogenous spermidine. Immunoblotting experiments suggest that the potato SAMDC gene product has an apparent molecular mass of 39 kDa. Expression of the SAMDC gene was high in the young and actively dividing tissues and low in the mature and non-dividing tissues of both vegetative and reproductive organs. Additionally, isolation and characterisation of the corresponding genomic clone is reported. The gene has one intron in its 5'-untranslated sequence but otherwise the transcribed portion is identical to the cDNA clone.
Mad Arif, SA. Taylor, MA. George, LA. Butler, AR. Burch, LR. Davies, HV. Stark, MJ. Kumar, A.
Plant molecular biology.
1994.
26(1).
327-38.
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