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Expression Template: AJ717999_s_at

Template Basic Information

Template name:	AJ717999_s_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U444480
External db links:	GenBank: AJ717999

Annotations for unigene SGN-U444480 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
AJ717999_s_at_probe_01	PM	data not available	data not available	1
AJ717999_s_at_probe_02	PM	data not available	data not available	1
AJ717999_s_at_probe_03	PM	data not available	data not available	1
AJ717999_s_at_probe_04	PM	data not available	data not available	1
AJ717999_s_at_probe_05	PM	data not available	data not available	1
AJ717999_s_at_probe_06	PM	data not available	data not available	1
AJ717999_s_at_probe_07	PM	data not available	data not available	1
AJ717999_s_at_probe_08	PM	data not available	data not available	1
AJ717999_s_at_probe_09	PM	data not available	data not available	1
AJ717999_s_at_probe_10	PM	data not available	data not available	1
AJ717999_s_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	9.31	9.28	0.12	0.01
	TobEA vegetative shoot apex	shoot apex	8	8	9.00	9.36	0.77	0.09
	TobEA closed bud	flower bud	5	5	8.68	8.53	0.30	0.03
	TobEA open bud	flower bud	5	5	8.55	8.37	0.71	0.08
	TobEA cotyledons	cotyledon	5	5	8.57	8.68	0.34	0.04
	TobEA flower	flower	5	5	8.67	8.54	0.34	0.04
	TobEA lower stem	stem internode	5	5	8.75	8.79	0.49	0.06
	TobEA upper stem	stem internode	5	5	7.96	8.03	0.35	0.04
	TobEA cauline leaf	cauline leaf	5	5	7.53	7.39	0.34	0.05
	TobEA early senescent leaf	adult vascular leaf	5	5	8.63	8.87	1.15	0.13
	TobEA late senescent leaf	adult vascular leaf	5	5	8.79	8.64	0.61	0.07
	TobEA mature leaf	adult vascular leaf	5	5	8.70	8.80	0.34	0.04
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	8.10	8.31	0.86	0.11
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	7.86	7.39	1.18	0.15
	TobEA young leaf	juvenile vascular leaf	5	5	8.94	8.94	0.04	0.00
	TobEA mature root	root	5	5	9.04	9.04	0.10	0.01
	TobEA young root	root	6	6	8.82	8.76	0.56	0.06
	TobEA seed	seed	6	6	10.29	10.31	0.16	0.02
	TobEA young shoot	shoot system	5	5	8.77	8.78	0.35	0.04

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 145.CEL	9.261111	2e-4	P
	Atlas 146.CEL	9.282163	2e-4	P
	Atlas 144.CEL	9.517353	2e-4	P
	Atlas 143.CEL	9.212759	2e-4	P
	Atlas 147.CEL	9.300096	2e-4	P
TobEA vegetative shoot apex	Atlas 250.CEL	9.853736	2e-4	P
	Atlas 58.CEL	8.2174635	2e-4	P
	Atlas 246.CEL	9.568678	2e-4	P
	Atlas 247.CEL	9.502303	2e-4	P
	Atlas 248.CEL	9.219421	2e-4	P
	Atlas 249.CEL	9.523631	2e-4	P
	Atlas 59.CEL	7.827448	2e-4	P
	Atlas 61.CEL	8.27031	2e-4	P
TobEA closed bud	Atlas 163.CEL	8.514372	2e-4	P
	Atlas 195.CEL	8.850865	2e-4	P
	Atlas 199.CEL	9.108037	2e-4	P
	Atlas 161.CEL	8.384565	2e-4	P
	Atlas 173.CEL	8.534694	2e-4	P
TobEA open bud	Atlas 244.CEL	7.8615904	2e-4	P
	Atlas 159.CEL	7.9258776	7e-4	P
	Atlas 167.CEL	9.229936	2e-4	P
	Atlas 171.CEL	9.347328	2e-4	P
	Atlas 169.CEL	8.3666	2e-4	P
TobEA cotyledons	Atlas 69.CEL	8.807835	0.002	P
	Atlas 75.CEL	8.535184	2e-4	P
	Atlas 70.CEL	7.999616	0.002	P
	Atlas 71.CEL	8.679767	2e-4	P
	Atlas 74.CEL	8.848984	0.002	P
TobEA flower	Atlas 158.CEL	8.54029	2e-4	P
	Atlas 166.CEL	8.415262	2e-4	P
	Atlas 165.CEL	8.32894	2e-4	P
	Atlas 197.CEL	8.969454	2e-4	P
	Atlas 198.CEL	9.098212	2e-4	P
TobEA lower stem	Atlas 200.CEL	8.995934	2e-4	P
	Atlas 164.CEL	8.261116	2e-4	P
	Atlas 245.CEL	9.413806	2e-4	P
	Atlas 174.CEL	8.793097	2e-4	P
	Atlas 172.CEL	8.288362	7e-4	P
TobEA upper stem	Atlas 160.CEL	7.5937524	2e-4	P
	Atlas 170.CEL	8.030164	2e-4	P
	Atlas 196.CEL	8.349195	2e-4	P
	Atlas 162.CEL	7.613042	0.001	P
	Atlas 168.CEL	8.215505	7e-4	P
TobEA cauline leaf	Atlas 229.CEL	7.66785	2e-4	P
	Atlas 235.CEL	7.3879466	2e-4	P
	Atlas 231.CEL	7.2068853	2e-4	P
	Atlas 233.CEL	8.057855	7e-4	P
	Atlas 237.CEL	7.321749	7e-4	P
TobEA early senescent leaf	Atlas 175.CEL	7.004979	2e-4	P
	Atlas 182.CEL	7.9812245	2e-4	P
	Atlas 183.CEL	8.867185	0.001	P
	Atlas 187.CEL	9.474043	2e-4	P
	Atlas 191.CEL	9.820908	2e-4	P
TobEA late senescent leaf	Atlas 179.CEL	9.280835	7e-4	P
	Atlas 186.CEL	8.356539	0.001	P
	Atlas 194.CEL	8.635253	2e-4	P
	Atlas 178.CEL	8.127906	2e-4	P
	Atlas 190.CEL	9.555775	2e-4	P
TobEA mature leaf	Atlas 94.CEL	8.795717	2e-4	P
	Atlas 95.CEL	8.458668	7e-4	P
	Atlas 96.CEL	8.262019	7e-4	P
	Atlas 93.CEL	9.125784	2e-4	P
	Atlas 97.CEL	8.868654	2e-4	P
TobEA mid/early senescent leaf	Atlas 181.CEL	8.407212	2e-4	P
	Atlas 176.CEL	7.239313	0.002	P
	Atlas 184.CEL	7.254955	0.001	P
	Atlas 188.CEL	9.276798	0.001	P
	Atlas 192.CEL	8.312363	7e-4	P
TobEA mid/late senescent leaf	Atlas 185.CEL	8.923379	7e-4	P
	Atlas 189.CEL	9.302925	2e-4	P
	Atlas 193.CEL	6.605086	0.002	P
	Atlas 177.CEL	7.1060534	2e-4	P
	Atlas 180.CEL	7.3850837	0.004	P
TobEA young leaf	Atlas 54.CEL	8.942091	2e-4	P
	Atlas 55.CEL	9.003435	2e-4	P
	Atlas 56.CEL	8.878316	2e-4	P
	Atlas 53.CEL	8.930135	2e-4	P
	Atlas 57.CEL	8.944673	2e-4	P
TobEA mature root	Atlas 64.CEL	9.019745	2e-4	P
	Atlas 65.CEL	9.170619	2e-4	P
	Atlas 63.CEL	9.039568	2e-4	P
	Atlas 66.CEL	9.08389	7e-4	P
	Atlas 67.CEL	8.903166	2e-4	P
TobEA young root	Atlas 40.CEL	8.635101	2e-4	P
	Atlas 43.CEL	7.9546537	7e-4	P
	Atlas 42.CEL	8.791291	2e-4	P
	Atlas 44.CEL	8.733176	2e-4	P
	Atlas 39.CEL	9.574176	2e-4	P
	Atlas 41.CEL	9.248436	2e-4	P
TobEA seed	Atlas 78.CEL	10.33949	2e-4	P
	Atlas 79.CEL	10.491014	2e-4	P
	Atlas 98.CEL	10.357452	2e-4	P
	Atlas 76.CEL	10.007258	2e-4	P
	Atlas 99.CEL	10.24279	2e-4	P
	Atlas 77.CEL	10.272894	2e-4	P
TobEA young shoot	Atlas 88.CEL	8.572155	0.001	P
	Atlas 89.CEL	9.292554	2e-4	P
	Atlas 86.CEL	8.342811	7e-4	P
	Atlas 90.CEL	8.7843075	2e-4	P
	Atlas 87.CEL	8.849401	0.001	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (23 templates correlated)

Template	Pearson	Internal Mapping
BP532537_at	0.9631507	SGN-U461396
EB431055_x_at	0.9465698	SGN-U449273
DV159657_s_at	0.9169185	SGN-U449273
TT04_O04_at	0.9129068	SGN-U459712
DV159907_at	0.8882861	SGN-U461378
AJ632828_at	0.8729022	SGN-U434948
DV158099_at	0.8614227	SGN-U449445
DW001811_at	0.8590117	SGN-U460236
DV999343_x_at	0.8528511	SGN-U448771
EB433013_at	0.8527141	SGN-U487370
C8052_x_at	0.8494624	SGN-U448429
MC305A_at	0.8492578	No available
BP192645_at	0.8440298	SGN-U463718
BP533269_at	0.8406449	SGN-U467321
EB444888_at	0.8301524	SGN-U457905
EB445591_at	0.8269629	SGN-U456836
C9014_x_at	0.8244468	SGN-U446978
EB679681_at	0.8183922	SGN-U464896
BP132883_at	0.8070203	SGN-U459758
DV999343_at	0.8062894	SGN-U448771
EB682856_at	0.804302	SGN-U456759
AJ717891_x_at	0.8018646	SGN-U446725
C1090_at	0.8015618	SGN-U444817

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