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Expression Template: BP132883_at

Template Basic Information

Template name:	BP132883_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U459758
External db links:	GenBank: BP132883

Annotations for unigene SGN-U459758 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
BP132883_at_probe_01	PM	data not available	data not available	1
BP132883_at_probe_02	PM	data not available	data not available	1
BP132883_at_probe_03	PM	data not available	data not available	1
BP132883_at_probe_04	PM	data not available	data not available	1
BP132883_at_probe_05	PM	data not available	data not available	1
BP132883_at_probe_06	PM	data not available	data not available	1
BP132883_at_probe_07	PM	data not available	data not available	1
BP132883_at_probe_08	PM	data not available	data not available	1
BP132883_at_probe_09	PM	data not available	data not available	1
BP132883_at_probe_10	PM	data not available	data not available	1
BP132883_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	7.91	7.93	0.28	0.04
	TobEA vegetative shoot apex	shoot apex	8	8	7.70	7.76	0.54	0.07
	TobEA closed bud	flower bud	5	5	7.69	7.63	0.13	0.02
	TobEA open bud	flower bud	5	5	7.50	7.34	0.27	0.04
	TobEA cotyledons	cotyledon	5	5	7.68	7.58	0.54	0.07
	TobEA flower	flower	5	5	7.44	7.57	0.49	0.07
	TobEA lower stem	stem internode	5	5	7.32	7.28	0.44	0.06
	TobEA upper stem	stem internode	5	5	6.93	6.89	0.21	0.03
	TobEA cauline leaf	cauline leaf	5	5	6.84	6.90	0.25	0.04
	TobEA early senescent leaf	adult vascular leaf	5	5	7.64	7.62	0.59	0.08
	TobEA late senescent leaf	adult vascular leaf	5	5	7.94	7.88	0.17	0.02
	TobEA mature leaf	adult vascular leaf	5	5	7.79	7.92	0.32	0.04
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	7.54	7.68	0.46	0.06
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	7.25	7.11	0.65	0.09
	TobEA young leaf	juvenile vascular leaf	5	5	7.93	7.87	0.15	0.02
	TobEA mature root	root	5	5	7.60	7.65	0.37	0.05
	TobEA young root	root	6	6	7.85	7.90	0.36	0.05
	TobEA seed	seed	6	6	9.58	9.63	0.35	0.04
	TobEA young shoot	shoot system	5	5	8.22	8.32	0.36	0.04

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 144.CEL	7.9305134	2e-4	P
	Atlas 145.CEL	8.143247	7e-4	P
	Atlas 143.CEL	8.14793	2e-4	P
	Atlas 146.CEL	7.4570775	0.001	P
	Atlas 147.CEL	7.8825984	2e-4	P
TobEA vegetative shoot apex	Atlas 246.CEL	7.983587	2e-4	P
	Atlas 250.CEL	8.282857	7e-4	P
	Atlas 61.CEL	7.5377746	0.002	P
	Atlas 247.CEL	8.178779	7e-4	P
	Atlas 59.CEL	6.827633	0.030	P
	Atlas 248.CEL	7.4660935	0.001	P
	Atlas 249.CEL	8.210075	2e-4	P
	Atlas 58.CEL	7.1303587	0.002	P
TobEA closed bud	Atlas 195.CEL	7.8164115	2e-4	P
	Atlas 163.CEL	7.6313105	2e-4	P
	Atlas 161.CEL	7.6272388	0.001	P
	Atlas 199.CEL	7.83834	2e-4	P
	Atlas 173.CEL	7.5491576	7e-4	P
TobEA open bud	Atlas 167.CEL	7.6798425	2e-4	P
	Atlas 171.CEL	7.8818426	2e-4	P
	Atlas 244.CEL	7.279394	2e-4	P
	Atlas 159.CEL	7.3287373	2e-4	P
	Atlas 169.CEL	7.336504	0.004	P
TobEA cotyledons	Atlas 71.CEL	8.084534	0.002	P
	Atlas 70.CEL	7.0566626	0.030	P
	Atlas 75.CEL	8.381254	2e-4	P
	Atlas 69.CEL	7.575866	0.002	P
	Atlas 74.CEL	7.323245	7e-4	P
TobEA flower	Atlas 158.CEL	6.675118	2e-4	P
	Atlas 197.CEL	7.9944663	0.002	P
	Atlas 198.CEL	7.5731983	0.001	P
	Atlas 165.CEL	7.64225	0.002	P
	Atlas 166.CEL	7.3313184	0.003	P
TobEA lower stem	Atlas 200.CEL	7.776217	7e-4	P
	Atlas 174.CEL	7.280036	2e-4	P
	Atlas 245.CEL	7.7422833	7e-4	P
	Atlas 164.CEL	7.0521584	0.002	P
	Atlas 172.CEL	6.7687864	0.008	P
TobEA upper stem	Atlas 162.CEL	6.8888006	0.002	P
	Atlas 170.CEL	6.9278684	2e-4	P
	Atlas 196.CEL	7.268248	2e-4	P
	Atlas 160.CEL	6.7007523	0.003	P
	Atlas 168.CEL	6.873213	7e-4	P
TobEA cauline leaf	Atlas 235.CEL	6.492693	0.003	P
	Atlas 229.CEL	7.0848804	2e-4	P
	Atlas 231.CEL	6.8997555	2e-4	P
	Atlas 237.CEL	6.689752	2e-4	P
	Atlas 233.CEL	7.0282335	2e-4	P
TobEA early senescent leaf	Atlas 187.CEL	8.340933	0.006	P
	Atlas 191.CEL	8.059521	7e-4	P
	Atlas 175.CEL	6.8192616	0.011	P
	Atlas 182.CEL	7.368759	7e-4	P
	Atlas 183.CEL	7.623157	0.038	P
TobEA late senescent leaf	Atlas 186.CEL	7.879725	0.006	P
	Atlas 179.CEL	8.214146	2e-4	P
	Atlas 190.CEL	7.857956	2e-4	P
	Atlas 194.CEL	7.9981318	2e-4	P
	Atlas 178.CEL	7.767818	7e-4	P
TobEA mature leaf	Atlas 94.CEL	7.473667	2e-4	P
	Atlas 95.CEL	7.4371123	0.002	P
	Atlas 93.CEL	8.034699	7e-4	P
	Atlas 96.CEL	7.915182	0.002	P
	Atlas 97.CEL	8.110003	7e-4	P
TobEA mid/early senescent leaf	Atlas 181.CEL	7.8151	0.002	P
	Atlas 184.CEL	6.854136	0.004	P
	Atlas 176.CEL	7.3106275	7e-4	P
	Atlas 188.CEL	8.0301695	2e-4	P
	Atlas 192.CEL	7.6833525	7e-4	P
TobEA mid/late senescent leaf	Atlas 193.CEL	7.113181	7e-4	P
	Atlas 177.CEL	6.898486	0.002	P
	Atlas 180.CEL	6.6429887	0.014	P
	Atlas 185.CEL	7.2435293	0.008	P
	Atlas 189.CEL	8.341272	7e-4	P
TobEA young leaf	Atlas 53.CEL	8.118821	2e-4	P
	Atlas 56.CEL	8.05026	0.001	P
	Atlas 55.CEL	7.798625	0.001	P
	Atlas 54.CEL	7.809337	2e-4	P
	Atlas 57.CEL	7.868925	2e-4	P
TobEA mature root	Atlas 66.CEL	7.2472568	2e-4	P
	Atlas 65.CEL	7.6563683	0.001	P
	Atlas 63.CEL	8.165452	0.002	P
	Atlas 64.CEL	7.281978	0.006	P
	Atlas 67.CEL	7.654157	0.002	P
TobEA young root	Atlas 44.CEL	7.681521	7e-4	P
	Atlas 39.CEL	8.137428	2e-4	P
	Atlas 41.CEL	8.254841	0.001	P
	Atlas 43.CEL	7.482265	7e-4	P
	Atlas 40.CEL	7.4448676	2e-4	P
	Atlas 42.CEL	8.116492	7e-4	P
TobEA seed	Atlas 77.CEL	9.591584	2e-4	P
	Atlas 78.CEL	9.244273	0.002	P
	Atlas 99.CEL	9.881578	7e-4	P
	Atlas 76.CEL	9.0936365	2e-4	P
	Atlas 79.CEL	9.673234	2e-4	P
	Atlas 98.CEL	9.999268	7e-4	P
TobEA young shoot	Atlas 88.CEL	8.320617	0.002	P
	Atlas 86.CEL	7.5998983	7e-4	P
	Atlas 89.CEL	8.325492	7e-4	P
	Atlas 90.CEL	8.298006	0.002	P
	Atlas 87.CEL	8.560227	0.002	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (4 templates correlated)

Template	Pearson	Internal Mapping
DV159907_at	0.8372834	SGN-U461378
AJ717999_s_at	0.8070203	SGN-U444480
BP192645_at	0.8064722	SGN-U463718
BP131604_at	0.800973	SGN-U448323

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