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Expression Template: EB683258_at

Template Basic Information

Template name:	EB683258_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U424446
External db links:	GenBank: EB683258

Annotations for unigene SGN-U424446 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB683258_at_probe_01	PM	data not available	data not available	1
EB683258_at_probe_02	PM	data not available	data not available	1
EB683258_at_probe_03	PM	data not available	data not available	1
EB683258_at_probe_04	PM	data not available	data not available	1
EB683258_at_probe_05	PM	data not available	data not available	1
EB683258_at_probe_06	PM	data not available	data not available	1
EB683258_at_probe_07	PM	data not available	data not available	1
EB683258_at_probe_08	PM	data not available	data not available	1
EB683258_at_probe_09	PM	data not available	data not available	1
EB683258_at_probe_10	PM	data not available	data not available	1
EB683258_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	9.67	9.68	0.23	0.02
	TobEA vegetative shoot apex	shoot apex	8	8	9.07	9.15	0.34	0.04
	TobEA closed bud	flower bud	5	5	9.16	9.19	0.13	0.01
	TobEA open bud	flower bud	5	5	9.03	9.01	0.14	0.02
	TobEA cotyledons	cotyledon	5	5	9.04	9.15	0.24	0.03
	TobEA flower	flower	5	5	9.31	9.26	0.18	0.02
	TobEA lower stem	stem internode	5	5	9.58	9.56	0.07	0.01
	TobEA upper stem	stem internode	5	5	8.91	8.94	0.17	0.02
	TobEA cauline leaf	cauline leaf	5	5	9.35	9.36	0.10	0.01
	TobEA early senescent leaf	adult vascular leaf	5	5	8.88	9.00	0.35	0.04
	TobEA late senescent leaf	adult vascular leaf	5	5	9.62	9.46	0.34	0.04
	TobEA mature leaf	adult vascular leaf	5	5	9.34	9.29	0.16	0.02
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	8.44	8.11	0.61	0.07
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	8.94	9.33	0.86	0.10
	TobEA young leaf	juvenile vascular leaf	5	5	9.19	9.24	0.09	0.01
	TobEA mature root	root	5	5	9.61	9.62	0.15	0.02
	TobEA young root	root	6	6	9.32	9.42	0.37	0.04
	TobEA seed	seed	6	6	9.08	8.99	0.40	0.04
	TobEA young shoot	shoot system	5	5	9.07	9.12	0.09	0.01

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 143.CEL	9.692616	2e-4	P
	Atlas 144.CEL	10.033101	2e-4	P
	Atlas 146.CEL	9.68329	2e-4	P
	Atlas 147.CEL	9.472344	2e-4	P
	Atlas 145.CEL	9.491643	2e-4	P
TobEA vegetative shoot apex	Atlas 249.CEL	9.327548	2e-4	P
	Atlas 59.CEL	8.77616	7e-4	P
	Atlas 247.CEL	9.413557	2e-4	P
	Atlas 250.CEL	9.177909	2e-4	P
	Atlas 58.CEL	8.966201	2e-4	P
	Atlas 246.CEL	9.357492	2e-4	P
	Atlas 248.CEL	8.410983	2e-4	P
	Atlas 61.CEL	9.112108	2e-4	P
TobEA closed bud	Atlas 161.CEL	9.32006	2e-4	P
	Atlas 163.CEL	9.210975	2e-4	P
	Atlas 173.CEL	9.004731	2e-4	P
	Atlas 195.CEL	9.1898155	2e-4	P
	Atlas 199.CEL	9.060652	2e-4	P
TobEA open bud	Atlas 169.CEL	9.24836	2e-4	P
	Atlas 244.CEL	8.859069	2e-4	P
	Atlas 167.CEL	8.974989	2e-4	P
	Atlas 159.CEL	9.011607	2e-4	P
	Atlas 171.CEL	9.03638	2e-4	P
TobEA cotyledons	Atlas 71.CEL	9.043289	2e-4	P
	Atlas 70.CEL	8.6333065	2e-4	P
	Atlas 75.CEL	9.153117	2e-4	P
	Atlas 69.CEL	9.195131	2e-4	P
	Atlas 74.CEL	9.177195	2e-4	P
TobEA flower	Atlas 197.CEL	9.209129	2e-4	P
	Atlas 166.CEL	9.256356	2e-4	P
	Atlas 198.CEL	9.43773	2e-4	P
	Atlas 158.CEL	9.544596	2e-4	P
	Atlas 165.CEL	9.081273	2e-4	P
TobEA lower stem	Atlas 174.CEL	9.502247	7e-4	P
	Atlas 200.CEL	9.5637245	2e-4	P
	Atlas 164.CEL	9.52402	2e-4	P
	Atlas 245.CEL	9.624549	2e-4	P
	Atlas 172.CEL	9.6650505	2e-4	P
TobEA upper stem	Atlas 160.CEL	8.658617	2e-4	P
	Atlas 162.CEL	9.090839	2e-4	P
	Atlas 170.CEL	8.936256	2e-4	P
	Atlas 196.CEL	9.032979	2e-4	P
	Atlas 168.CEL	8.830871	2e-4	P
TobEA cauline leaf	Atlas 229.CEL	9.375568	2e-4	P
	Atlas 231.CEL	9.364057	2e-4	P
	Atlas 235.CEL	9.32636	2e-4	P
	Atlas 233.CEL	9.199496	2e-4	P
	Atlas 237.CEL	9.480551	2e-4	P
TobEA early senescent leaf	Atlas 183.CEL	8.998739	0.003	P
	Atlas 187.CEL	9.055943	2e-4	P
	Atlas 191.CEL	9.275719	2e-4	P
	Atlas 182.CEL	8.660885	2e-4	P
	Atlas 175.CEL	8.395636	2e-4	P
TobEA late senescent leaf	Atlas 186.CEL	9.261221	2e-4	P
	Atlas 194.CEL	9.458727	2e-4	P
	Atlas 179.CEL	9.888369	2e-4	P
	Atlas 190.CEL	10.060967	2e-4	P
	Atlas 178.CEL	9.418223	2e-4	P
TobEA mature leaf	Atlas 93.CEL	9.593907	2e-4	P
	Atlas 94.CEL	9.386335	2e-4	P
	Atlas 96.CEL	9.185138	2e-4	P
	Atlas 95.CEL	9.294615	2e-4	P
	Atlas 97.CEL	9.254701	2e-4	P
TobEA mid/early senescent leaf	Atlas 188.CEL	9.027989	2e-4	P
	Atlas 192.CEL	8.10644	2e-4	P
	Atlas 176.CEL	8.002516	2e-4	P
	Atlas 181.CEL	9.182757	2e-4	P
	Atlas 184.CEL	7.8982997	2e-4	P
TobEA mid/late senescent leaf	Atlas 180.CEL	9.513125	2e-4	P
	Atlas 185.CEL	9.331553	2e-4	P
	Atlas 189.CEL	9.798232	2e-4	P
	Atlas 193.CEL	7.8817472	2e-4	P
	Atlas 177.CEL	8.153574	2e-4	P
TobEA young leaf	Atlas 56.CEL	9.272717	2e-4	P
	Atlas 57.CEL	9.1602	2e-4	P
	Atlas 54.CEL	9.239977	2e-4	P
	Atlas 55.CEL	9.050944	2e-4	P
	Atlas 53.CEL	9.250883	2e-4	P
TobEA mature root	Atlas 65.CEL	9.617588	2e-4	P
	Atlas 67.CEL	9.504829	2e-4	P
	Atlas 63.CEL	9.411728	2e-4	P
	Atlas 66.CEL	9.718514	2e-4	P
	Atlas 64.CEL	9.773352	2e-4	P
TobEA young root	Atlas 39.CEL	9.449459	2e-4	P
	Atlas 40.CEL	9.279981	2e-4	P
	Atlas 41.CEL	9.653462	2e-4	P
	Atlas 44.CEL	9.529408	2e-4	P
	Atlas 42.CEL	9.393964	2e-4	P
	Atlas 43.CEL	8.611598	2e-4	P
TobEA seed	Atlas 76.CEL	8.545629	2e-4	P
	Atlas 79.CEL	9.100643	2e-4	P
	Atlas 78.CEL	8.87755	2e-4	P
	Atlas 99.CEL	8.866668	2e-4	P
	Atlas 77.CEL	9.644706	2e-4	P
	Atlas 98.CEL	9.426305	2e-4	P
TobEA young shoot	Atlas 87.CEL	9.037938	2e-4	P
	Atlas 88.CEL	8.927726	2e-4	P
	Atlas 90.CEL	9.127418	2e-4	P
	Atlas 86.CEL	9.121926	2e-4	P
	Atlas 89.CEL	9.154829	2e-4	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (7 templates correlated)

Template	Pearson	Internal Mapping
EB446520_at	0.8327947	SGN-U480749
C7902_at	0.8280452	SGN-U450680
C4660_at	0.8256055	SGN-U439032
C7248_s_at	0.8182559	SGN-U439032
EB446589_at	0.8135579	SGN-U422433
C10215_at	0.8108134	SGN-U434349
C1579_at	0.8044098	SGN-U425791

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