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Expression Template: EB679782_at

Template Basic Information

Template name:	EB679782_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U450296
External db links:	GenBank: EB679782

Annotations for unigene SGN-U450296 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB679782_at_probe_01	PM	data not available	data not available	1
EB679782_at_probe_02	PM	data not available	data not available	1
EB679782_at_probe_03	PM	data not available	data not available	1
EB679782_at_probe_04	PM	data not available	data not available	1
EB679782_at_probe_05	PM	data not available	data not available	1
EB679782_at_probe_06	PM	data not available	data not available	1
EB679782_at_probe_07	PM	data not available	data not available	1
EB679782_at_probe_08	PM	data not available	data not available	1
EB679782_at_probe_09	PM	data not available	data not available	1
EB679782_at_probe_10	PM	data not available	data not available	1
EB679782_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	8.47	8.42	0.12	0.01
	TobEA vegetative shoot apex	shoot apex	8	8	8.51	8.52	0.10	0.01
	TobEA closed bud	flower bud	5	5	8.09	8.02	0.15	0.02
	TobEA open bud	flower bud	5	5	8.19	8.11	0.22	0.03
	TobEA cotyledons	cotyledon	5	5	7.94	7.90	0.19	0.02
	TobEA flower	flower	5	5	8.14	8.21	0.18	0.02
	TobEA lower stem	stem internode	5	5	8.53	8.41	0.21	0.02
	TobEA upper stem	stem internode	5	5	7.74	7.79	0.27	0.03
	TobEA cauline leaf	cauline leaf	5	5	8.07	8.08	0.10	0.01
	TobEA early senescent leaf	adult vascular leaf	5	5	8.51	8.43	0.26	0.03
	TobEA late senescent leaf	adult vascular leaf	5	5	9.11	9.02	0.23	0.03
	TobEA mature leaf	adult vascular leaf	5	5	8.57	8.53	0.17	0.02
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	8.60	8.42	0.47	0.06
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	8.89	8.96	0.15	0.02
	TobEA young leaf	juvenile vascular leaf	5	5	8.07	8.06	0.09	0.01
	TobEA mature root	root	5	5	8.33	8.26	0.23	0.03
	TobEA young root	root	6	6	8.37	8.38	0.17	0.02
	TobEA seed	seed	6	6	8.98	9.01	0.17	0.02
	TobEA young shoot	shoot system	5	5	7.89	7.89	0.15	0.02

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 145.CEL	8.356753	2e-4	P
	Atlas 147.CEL	8.41563	2e-4	P
	Atlas 143.CEL	8.591557	2e-4	P
	Atlas 144.CEL	8.6217375	2e-4	P
	Atlas 146.CEL	8.376332	2e-4	P
TobEA vegetative shoot apex	Atlas 249.CEL	8.526375	2e-4	P
	Atlas 61.CEL	8.638128	2e-4	P
	Atlas 247.CEL	8.545771	2e-4	P
	Atlas 248.CEL	8.450281	2e-4	P
	Atlas 59.CEL	8.620513	2e-4	P
	Atlas 246.CEL	8.522268	2e-4	P
	Atlas 250.CEL	8.346397	2e-4	P
	Atlas 58.CEL	8.448702	2e-4	P
TobEA closed bud	Atlas 161.CEL	8.358044	2e-4	P
	Atlas 163.CEL	8.023822	2e-4	P
	Atlas 173.CEL	8.013593	2e-4	P
	Atlas 195.CEL	8.021421	2e-4	P
	Atlas 199.CEL	8.035467	2e-4	P
TobEA open bud	Atlas 159.CEL	8.003532	2e-4	P
	Atlas 169.CEL	7.9923983	2e-4	P
	Atlas 244.CEL	8.112143	2e-4	P
	Atlas 167.CEL	8.449973	2e-4	P
	Atlas 171.CEL	8.415238	2e-4	P
TobEA cotyledons	Atlas 71.CEL	7.8714466	7e-4	P
	Atlas 70.CEL	7.9891973	7e-4	P
	Atlas 69.CEL	7.704648	2e-4	P
	Atlas 74.CEL	8.216835	0.006	P
	Atlas 75.CEL	7.9046273	2e-4	P
TobEA flower	Atlas 165.CEL	8.231398	2e-4	P
	Atlas 197.CEL	7.976285	2e-4	P
	Atlas 158.CEL	8.205795	2e-4	P
	Atlas 198.CEL	7.929604	2e-4	P
	Atlas 166.CEL	8.355082	7e-4	P
TobEA lower stem	Atlas 174.CEL	8.40714	2e-4	P
	Atlas 200.CEL	8.358791	2e-4	P
	Atlas 245.CEL	8.829192	2e-4	P
	Atlas 164.CEL	8.3978815	2e-4	P
	Atlas 172.CEL	8.669604	2e-4	P
TobEA upper stem	Atlas 196.CEL	7.7891617	2e-4	P
	Atlas 168.CEL	7.504496	2e-4	P
	Atlas 160.CEL	7.897571	2e-4	P
	Atlas 162.CEL	8.065701	2e-4	P
	Atlas 170.CEL	7.4326754	2e-4	P
TobEA cauline leaf	Atlas 229.CEL	8.068823	2e-4	P
	Atlas 231.CEL	8.136359	2e-4	P
	Atlas 237.CEL	8.176228	2e-4	P
	Atlas 233.CEL	8.079059	2e-4	P
	Atlas 235.CEL	7.913378	2e-4	P
TobEA early senescent leaf	Atlas 182.CEL	8.355515	2e-4	P
	Atlas 191.CEL	8.434067	2e-4	P
	Atlas 175.CEL	8.336681	2e-4	P
	Atlas 183.CEL	8.474496	2e-4	P
	Atlas 187.CEL	8.9657955	2e-4	P
TobEA late senescent leaf	Atlas 178.CEL	8.9085655	2e-4	P
	Atlas 186.CEL	9.017591	2e-4	P
	Atlas 179.CEL	9.316623	2e-4	P
	Atlas 190.CEL	9.400713	2e-4	P
	Atlas 194.CEL	8.915082	2e-4	P
TobEA mature leaf	Atlas 94.CEL	8.581499	2e-4	P
	Atlas 95.CEL	8.378745	2e-4	P
	Atlas 96.CEL	8.84291	2e-4	P
	Atlas 93.CEL	8.531131	2e-4	P
	Atlas 97.CEL	8.513584	2e-4	P
TobEA mid/early senescent leaf	Atlas 192.CEL	8.420997	2e-4	P
	Atlas 176.CEL	8.184149	2e-4	P
	Atlas 184.CEL	8.174541	2e-4	P
	Atlas 181.CEL	9.12961	2e-4	P
	Atlas 188.CEL	9.080019	2e-4	P
TobEA mid/late senescent leaf	Atlas 193.CEL	9.013205	2e-4	P
	Atlas 180.CEL	8.975582	2e-4	P
	Atlas 177.CEL	8.62775	2e-4	P
	Atlas 185.CEL	8.885551	2e-4	P
	Atlas 189.CEL	8.958211	2e-4	P
TobEA young leaf	Atlas 53.CEL	7.968877	2e-4	P
	Atlas 56.CEL	8.122993	2e-4	P
	Atlas 57.CEL	8.195525	2e-4	P
	Atlas 55.CEL	8.025801	2e-4	P
	Atlas 54.CEL	8.061039	2e-4	P
TobEA mature root	Atlas 66.CEL	8.181829	2e-4	P
	Atlas 65.CEL	8.683029	2e-4	P
	Atlas 63.CEL	8.41287	2e-4	P
	Atlas 64.CEL	8.117498	2e-4	P
	Atlas 67.CEL	8.263654	2e-4	P
TobEA young root	Atlas 40.CEL	8.170302	2e-4	P
	Atlas 41.CEL	8.4667015	2e-4	P
	Atlas 44.CEL	8.533929	2e-4	P
	Atlas 39.CEL	8.546177	2e-4	P
	Atlas 43.CEL	8.180341	2e-4	P
	Atlas 42.CEL	8.292848	2e-4	P
TobEA seed	Atlas 77.CEL	9.165914	2e-4	P
	Atlas 99.CEL	9.014004	2e-4	P
	Atlas 76.CEL	8.838391	2e-4	P
	Atlas 79.CEL	9.137824	2e-4	P
	Atlas 98.CEL	9.01453	2e-4	P
	Atlas 78.CEL	8.724715	2e-4	P
TobEA young shoot	Atlas 86.CEL	7.8859143	2e-4	P
	Atlas 89.CEL	7.7267437	7e-4	P
	Atlas 90.CEL	8.132472	2e-4	P
	Atlas 87.CEL	7.8129873	2e-4	P
	Atlas 88.CEL	7.91606	2e-4	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (6 templates correlated)

Template	Pearson	Internal Mapping
EB443206_at	0.8328355	SGN-U454774
C392_s_at	0.8270623	SGN-U433985
BP532579_at	0.8165397	SGN-U421130
BP531004_at	0.8157427	SGN-U480997
AB119475_at	0.8128881	SGN-U444118
BP535322_at	0.801224	SGN-U481203

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