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Expression Template: EB677226_at

Template Basic Information

Template name:	EB677226_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U468956
External db links:	GenBank: EB677226

Annotations for unigene SGN-U468956 (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|2145023\|gb\|AAB58402.1\|	114	8e-24	72.87	387 bp (50.0%)	3
Description:	15.5 kDa oleosin [Sesamum indicum]
arabidopsis	blastx	At5G40420.1	83.2	2e-16	58.87	372 bp (48.1%)	3
Description:	Symbols: PA23, OLEO2 \| OLEO2 (OLEOSIN 2) \| chr5:16190850-16191968 REVERSE
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB677226_at_probe_01	PM	data not available	data not available	1
EB677226_at_probe_02	PM	data not available	data not available	1
EB677226_at_probe_03	PM	data not available	data not available	1
EB677226_at_probe_04	PM	data not available	data not available	1
EB677226_at_probe_05	PM	data not available	data not available	1
EB677226_at_probe_06	PM	data not available	data not available	1
EB677226_at_probe_07	PM	data not available	data not available	1
EB677226_at_probe_08	PM	data not available	data not available	1
EB677226_at_probe_09	PM	data not available	data not available	1
EB677226_at_probe_10	PM	data not available	data not available	1
EB677226_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	7.40	7.39	0.27	0.04
	TobEA vegetative shoot apex	shoot apex	8	8	6.61	6.81	0.60	0.09
	TobEA closed bud	flower bud	5	5	5.09	5.07	0.40	0.08
	TobEA open bud	flower bud	5	5	4.72	4.78	0.35	0.08
	TobEA cotyledons	cotyledon	5	5	7.88	8.06	0.90	0.11
	TobEA flower	flower	5	5	5.33	5.28	0.49	0.09
	TobEA lower stem	stem internode	5	5	7.78	7.84	0.22	0.03
	TobEA upper stem	stem internode	5	5	5.24	5.57	0.73	0.14
	TobEA cauline leaf	cauline leaf	5	5	7.12	7.33	0.76	0.11
	TobEA early senescent leaf	adult vascular leaf	5	5	6.13	5.98	0.74	0.12
	TobEA late senescent leaf	adult vascular leaf	5	5	7.77	7.92	0.44	0.06
	TobEA mature leaf	adult vascular leaf	5	5	7.54	7.63	0.66	0.09
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	6.81	6.68	0.96	0.14
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	7.63	7.30	0.64	0.08
	TobEA young leaf	juvenile vascular leaf	5	5	6.26	6.25	0.16	0.03
	TobEA mature root	root	5	5	3.81	4.49	1.53	0.40
	TobEA young root	root	6	6	4.44	4.41	0.36	0.08
	TobEA seed	seed	6	6	11.93	12.32	0.76	0.06
	TobEA young shoot	shoot system	5	5	6.83	6.98	0.32	0.05

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 144.CEL	7.3904157	2e-4	P
	Atlas 143.CEL	7.7554455	2e-4	P
	Atlas 147.CEL	7.2224607	7e-4	P
	Atlas 145.CEL	7.0572805	0.002	P
	Atlas 146.CEL	7.552204	2e-4	P
TobEA vegetative shoot apex	Atlas 59.CEL	5.5233665	2e-4	P
	Atlas 248.CEL	7.205006	2e-4	P
	Atlas 58.CEL	6.6902194	7e-4	P
	Atlas 246.CEL	6.082088	0.002	P
	Atlas 247.CEL	6.923161	2e-4	P
	Atlas 249.CEL	7.098906	7e-4	P
	Atlas 61.CEL	6.2788043	2e-4	P
	Atlas 250.CEL	7.099928	0.001	P
TobEA closed bud	Atlas 173.CEL	5.074927	0.014	P
	Atlas 195.CEL	5.2331834	0.019	P
	Atlas 161.CEL	5.0317893	0.011	P
	Atlas 163.CEL	5.6255636	7e-4	P
	Atlas 199.CEL	4.5047812	0.081	A
TobEA open bud	Atlas 169.CEL	4.1573915	0.038	P
	Atlas 244.CEL	5.135351	0.014	P
	Atlas 159.CEL	4.784002	0.014	P
	Atlas 167.CEL	4.7119823	2e-4	P
	Atlas 171.CEL	4.8190775	0.030	P
TobEA cotyledons	Atlas 69.CEL	8.941492	2e-4	P
	Atlas 75.CEL	6.7549186	2e-4	P
	Atlas 71.CEL	8.062253	0.001	P
	Atlas 74.CEL	7.182735	2e-4	P
	Atlas 70.CEL	8.478873	7e-4	P
TobEA flower	Atlas 158.CEL	4.7092257	7e-4	P
	Atlas 166.CEL	5.93297	0.004	P
	Atlas 198.CEL	5.0360847	0.006	P
	Atlas 165.CEL	5.665874	0.004	P
	Atlas 197.CEL	5.281194	0.019	P
TobEA lower stem	Atlas 174.CEL	8.035402	2e-4	P
	Atlas 164.CEL	7.587458	2e-4	P
	Atlas 172.CEL	7.8402586	7e-4	P
	Atlas 200.CEL	7.904436	7e-4	P
	Atlas 245.CEL	7.5131893	2e-4	P
TobEA upper stem	Atlas 162.CEL	5.698772	0.003	P
	Atlas 170.CEL	5.7707214	0.001	P
	Atlas 168.CEL	5.57477	0.014	P
	Atlas 196.CEL	4.002146	0.171	A
	Atlas 160.CEL	5.176124	0.001	P
TobEA cauline leaf	Atlas 231.CEL	6.6442833	2e-4	P
	Atlas 229.CEL	8.051988	2e-4	P
	Atlas 237.CEL	7.333842	2e-4	P
	Atlas 233.CEL	6.1018844	2e-4	P
	Atlas 235.CEL	7.449328	2e-4	P
TobEA early senescent leaf	Atlas 175.CEL	6.701686	2e-4	P
	Atlas 182.CEL	7.0865264	2e-4	P
	Atlas 183.CEL	5.984086	0.038	P
	Atlas 187.CEL	5.4233046	0.399	A
	Atlas 191.CEL	5.4757876	0.002	P
TobEA late senescent leaf	Atlas 178.CEL	7.9160414	2e-4	P
	Atlas 194.CEL	8.041281	2e-4	P
	Atlas 179.CEL	8.033683	0.002	P
	Atlas 186.CEL	7.876457	2e-4	P
	Atlas 190.CEL	6.9941573	2e-4	P
TobEA mature leaf	Atlas 94.CEL	8.019148	2e-4	P
	Atlas 93.CEL	8.290996	2e-4	P
	Atlas 97.CEL	6.693459	7e-4	P
	Atlas 95.CEL	7.0448437	2e-4	P
	Atlas 96.CEL	7.6312	2e-4	P
TobEA mid/early senescent leaf	Atlas 181.CEL	8.405611	0.001	P
	Atlas 176.CEL	6.4132338	0.003	P
	Atlas 184.CEL	5.8183184	2e-4	P
	Atlas 188.CEL	6.753315	0.081	A
	Atlas 192.CEL	6.6770015	7e-4	P
TobEA mid/late senescent leaf	Atlas 177.CEL	7.610689	2e-4	P
	Atlas 185.CEL	7.2568183	2e-4	P
	Atlas 189.CEL	7.302575	0.006	P
	Atlas 193.CEL	8.735305	2e-4	P
	Atlas 180.CEL	7.236839	2e-4	P
TobEA young leaf	Atlas 55.CEL	6.5289884	0.002	P
	Atlas 54.CEL	6.253844	7e-4	P
	Atlas 53.CEL	6.163444	2e-4	P
	Atlas 56.CEL	6.1208982	0.001	P
	Atlas 57.CEL	6.249338	2e-4	P
TobEA mature root	Atlas 64.CEL	4.486236	0.112	A
	Atlas 66.CEL	3.7309783	0.366	A
	Atlas 65.CEL	4.5939803	0.019	P
	Atlas 67.CEL	1.2091756	0.696	A
	Atlas 63.CEL	5.030796	0.056	M
TobEA young root	Atlas 40.CEL	4.332241	0.024	P
	Atlas 44.CEL	4.5360546	0.011	P
	Atlas 41.CEL	5.0822854	0.002	P
	Atlas 39.CEL	4.4793396	0.171	A
	Atlas 42.CEL	4.0327115	0.068	A
	Atlas 43.CEL	4.2040486	0.004	P
TobEA seed	Atlas 77.CEL	10.999058	2e-4	P
	Atlas 98.CEL	12.290625	2e-4	P
	Atlas 78.CEL	12.515576	2e-4	P
	Atlas 79.CEL	12.357454	2e-4	P
	Atlas 76.CEL	10.933243	2e-4	P
	Atlas 99.CEL	12.513932	2e-4	P
TobEA young shoot	Atlas 87.CEL	7.004869	7e-4	P
	Atlas 86.CEL	7.035875	0.002	P
	Atlas 88.CEL	6.841184	0.002	P
	Atlas 89.CEL	6.277107	2e-4	P
	Atlas 90.CEL	6.976105	0.004	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (1 templates correlated)

Template	Pearson	Internal Mapping
DV159109_at	0.800419	SGN-U453707

Correlation Type:

Negative correlations (9 templates correlated)

Template	Pearson	Internal Mapping
C284_s_at	-0.8489394	SGN-U442096
AF390211_at	-0.8421976	SGN-U430067
C6561_at	-0.8400504	SGN-U442095
BP532607_s_at	-0.8142898	SGN-U449647
C1601_s_at	-0.8118716	SGN-U445818
EB449071_at	-0.8108417	SGN-U427265
C9482_s_at	-0.809426	SGN-U427264
C9482_at	-0.8028516	SGN-U427264
AW351426_at	-0.8013111	SGN-U442095

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