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Expression Template: EB449071_at

Template Basic Information

Template name:	EB449071_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U427265
External db links:	GenBank: EB449071

Annotations for unigene SGN-U427265 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB449071_at_probe_01	PM	data not available	data not available	1
EB449071_at_probe_02	PM	data not available	data not available	1
EB449071_at_probe_03	PM	data not available	data not available	1
EB449071_at_probe_04	PM	data not available	data not available	1
EB449071_at_probe_05	PM	data not available	data not available	1
EB449071_at_probe_06	PM	data not available	data not available	1
EB449071_at_probe_07	PM	data not available	data not available	1
EB449071_at_probe_08	PM	data not available	data not available	1
EB449071_at_probe_09	PM	data not available	data not available	1
EB449071_at_probe_10	PM	data not available	data not available	1
EB449071_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	9.94	9.86	0.23	0.02
	TobEA vegetative shoot apex	shoot apex	8	8	11.15	11.07	0.56	0.05
	TobEA closed bud	flower bud	5	5	11.14	11.35	0.44	0.04
	TobEA open bud	flower bud	5	5	11.31	11.42	0.30	0.03
	TobEA cotyledons	cotyledon	5	5	9.28	9.16	0.42	0.04
	TobEA flower	flower	5	5	9.38	9.75	0.70	0.08
	TobEA lower stem	stem internode	5	5	10.50	10.56	0.28	0.03
	TobEA upper stem	stem internode	5	5	12.03	12.02	0.06	0.01
	TobEA cauline leaf	cauline leaf	5	5	8.32	8.31	0.07	0.01
	TobEA early senescent leaf	adult vascular leaf	5	5	8.38	8.50	1.06	0.13
	TobEA late senescent leaf	adult vascular leaf	5	5	7.61	7.21	0.76	0.10
	TobEA mature leaf	adult vascular leaf	5	5	7.64	7.69	0.39	0.05
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	8.32	8.53	1.18	0.14
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	7.86	7.23	1.33	0.17
	TobEA young leaf	juvenile vascular leaf	5	5	9.93	9.87	0.40	0.04
	TobEA mature root	root	5	5	11.77	11.81	0.23	0.02
	TobEA young root	root	6	6	11.59	11.66	0.26	0.02
	TobEA seed	seed	6	6	1.80	1.78	1.62	0.90
	TobEA young shoot	shoot system	5	5	9.99	10.02	0.33	0.03

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 144.CEL	9.8649235	2e-4	P
	Atlas 143.CEL	10.30969	2e-4	P
	Atlas 147.CEL	9.694061	2e-4	P
	Atlas 145.CEL	9.852571	0.001	P
	Atlas 146.CEL	9.992326	2e-4	P
TobEA vegetative shoot apex	Atlas 247.CEL	11.12932	2e-4	P
	Atlas 58.CEL	11.794299	2e-4	P
	Atlas 246.CEL	10.824472	2e-4	P
	Atlas 248.CEL	11.015853	2e-4	P
	Atlas 59.CEL	11.763724	2e-4	P
	Atlas 249.CEL	10.448143	2e-4	P
	Atlas 250.CEL	10.501691	2e-4	P
	Atlas 61.CEL	11.724597	2e-4	P
TobEA closed bud	Atlas 163.CEL	10.510023	2e-4	P
	Atlas 173.CEL	11.456336	2e-4	P
	Atlas 161.CEL	10.840293	2e-4	P
	Atlas 195.CEL	11.35295	2e-4	P
	Atlas 199.CEL	11.536622	2e-4	P
TobEA open bud	Atlas 167.CEL	11.415163	2e-4	P
	Atlas 171.CEL	10.815348	7e-4	P
	Atlas 169.CEL	11.271672	2e-4	P
	Atlas 159.CEL	11.549013	2e-4	P
	Atlas 244.CEL	11.520634	2e-4	P
TobEA cotyledons	Atlas 74.CEL	9.420745	0.002	P
	Atlas 69.CEL	9.15597	0.003	P
	Atlas 70.CEL	9.127418	0.001	P
	Atlas 71.CEL	8.79032	0.001	P
	Atlas 75.CEL	9.907408	0.002	P
TobEA flower	Atlas 158.CEL	9.902894	2e-4	P
	Atlas 165.CEL	8.200732	2e-4	P
	Atlas 197.CEL	9.746397	7e-4	P
	Atlas 166.CEL	9.249326	0.002	P
	Atlas 198.CEL	9.790059	2e-4	P
TobEA lower stem	Atlas 172.CEL	10.789822	7e-4	P
	Atlas 164.CEL	10.564887	2e-4	P
	Atlas 174.CEL	10.578657	2e-4	P
	Atlas 200.CEL	10.55161	2e-4	P
	Atlas 245.CEL	10.034093	2e-4	P
TobEA upper stem	Atlas 162.CEL	12.040618	2e-4	P
	Atlas 196.CEL	12.129649	2e-4	P
	Atlas 168.CEL	11.962076	2e-4	P
	Atlas 160.CEL	12.01132	2e-4	P
	Atlas 170.CEL	12.01692	2e-4	P
TobEA cauline leaf	Atlas 237.CEL	8.2191	7e-4	P
	Atlas 229.CEL	8.312678	0.001	P
	Atlas 233.CEL	8.379055	7e-4	P
	Atlas 235.CEL	8.392129	2e-4	P
	Atlas 231.CEL	8.306892	2e-4	P
TobEA early senescent leaf	Atlas 182.CEL	9.173626	2e-4	P
	Atlas 175.CEL	9.618387	0.002	P
	Atlas 183.CEL	7.450352	0.008	P
	Atlas 187.CEL	7.180074	0.011	P
	Atlas 191.CEL	8.502319	7e-4	P
TobEA late senescent leaf	Atlas 178.CEL	8.625024	7e-4	P
	Atlas 186.CEL	7.2068243	7e-4	P
	Atlas 179.CEL	7.2116804	7e-4	P
	Atlas 190.CEL	8.201391	0.004	P
	Atlas 194.CEL	6.8219366	0.002	P
TobEA mature leaf	Atlas 95.CEL	7.2460384	2e-4	P
	Atlas 96.CEL	7.2260904	0.006	P
	Atlas 94.CEL	8.044705	0.001	P
	Atlas 93.CEL	7.6943016	0.002	P
	Atlas 97.CEL	7.978531	0.002	P
TobEA mid/early senescent leaf	Atlas 176.CEL	9.70713	7e-4	P
	Atlas 184.CEL	9.131821	0.002	P
	Atlas 188.CEL	7.173876	0.004	P
	Atlas 192.CEL	8.530967	2e-4	P
	Atlas 181.CEL	7.0582895	0.014	P
TobEA mid/late senescent leaf	Atlas 180.CEL	6.578658	0.006	P
	Atlas 177.CEL	9.897606	0.002	P
	Atlas 185.CEL	7.159177	0.036	P
	Atlas 189.CEL	7.2313757	0.030	P
	Atlas 193.CEL	8.455316	7e-4	P
TobEA young leaf	Atlas 54.CEL	10.418383	7e-4	P
	Atlas 55.CEL	9.551977	2e-4	P
	Atlas 56.CEL	9.867248	7e-4	P
	Atlas 57.CEL	9.570558	2e-4	P
	Atlas 53.CEL	10.266481	0.002	P
TobEA mature root	Atlas 64.CEL	11.413776	2e-4	P
	Atlas 66.CEL	11.805264	2e-4	P
	Atlas 65.CEL	11.725441	2e-4	P
	Atlas 67.CEL	12.057359	2e-4	P
	Atlas 63.CEL	11.841516	2e-4	P
TobEA young root	Atlas 39.CEL	11.768796	7e-4	P
	Atlas 42.CEL	11.559754	7e-4	P
	Atlas 43.CEL	11.840878	2e-4	P
	Atlas 40.CEL	11.306119	2e-4	P
	Atlas 44.CEL	11.810233	2e-4	P
	Atlas 41.CEL	11.235545	2e-4	P
TobEA seed	Atlas 77.CEL	3.4261765	0.466	A
	Atlas 99.CEL		0.870	A
	Atlas 76.CEL		0.992	A
	Atlas 98.CEL	3.8018522	0.500	A
	Atlas 78.CEL	1.7274766	0.781	A
	Atlas 79.CEL	1.8236196	0.666	A
TobEA young shoot	Atlas 86.CEL	10.202769	7e-4	P
	Atlas 88.CEL	10.024679	2e-4	P
	Atlas 90.CEL	10.361354	2e-4	P
	Atlas 89.CEL	9.510966	7e-4	P
	Atlas 87.CEL	9.840069	2e-4	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (73 templates correlated)

Template	Pearson	Internal Mapping
C9482_at	0.9292967	SGN-U427264
C9482_s_at	0.9137398	SGN-U427264
C4592_x_at	0.9068329	SGN-U432190
C6479_x_at	0.8978808	SGN-U432189
DW000576_at	0.8963548	SGN-U477365
C5756_s_at	0.8854424	SGN-U444388
C4592_at	0.8853735	SGN-U432190
C8906_s_at	0.8742976	SGN-U424897
EB446508_at	0.8709967	SGN-U438237
C4150_s_at	0.8706039	SGN-U449448
EB440052_at	0.8686727	SGN-U427388
C8871_at	0.8675602	SGN-U422092
C10819_at	0.8627213	SGN-U424955
C6060_at	0.8594738	SGN-U435272
C3525_s_at	0.8581205	SGN-U449448
C1460_at	0.8574655	SGN-U451651
C4950_at	0.8572658	SGN-U444456
TT24_G08_at	0.8559826	SGN-U434967
C3638_at	0.8550128	SGN-U444107
TT11_K16_s_at	0.8533653	SGN-U444107
C3948_at	0.8528236	SGN-U434370
C8906_at	0.8526352	SGN-U424897
C817_at	0.8512141	SGN-U443545
C5128_s_at	0.849799	SGN-U424893
C3983_at	0.849794	SGN-U438119
C6202_at	0.8489554	SGN-U448769
C2653_at	0.8485947	SGN-U443543
C461_at	0.8469045	SGN-U427666
C3508_x_at	0.8453979	SGN-U449682
TT33_E19_s_at	0.8442092	SGN-U447004
C4731_at	0.8437354	SGN-U428159
C4897_at	0.843293	SGN-U424893
EB452083_at	0.842968	SGN-U446938
BP530328_s_at	0.8417842	SGN-U471912
C228_s_at	0.8368909	SGN-U449536
C4731_s_at	0.8365367	SGN-U428159
EB448899_s_at	0.8364177	SGN-U456421
TT32_H04_at	0.8355632	SGN-U422589
C4142_at	0.8347811	SGN-U446194
C5133_at	0.8345864	SGN-U431105
TT20_D12_x_at	0.8326904	SGN-U449647
TT10_B01_at	0.8303139	SGN-U430327
C5149_s_at	0.8293108	SGN-U438120
DV161859_at	0.8285759	SGN-U472083
C6479_at	0.8276844	SGN-U432189
C10933_x_at	0.826956	No available
EB436085_x_at	0.826735	SGN-U473635
C11533_at	0.826554	SGN-U450733
CV021160_s_at	0.8212838	SGN-U427353
TT20_D12_at	0.8165765	SGN-U449647
TT36_O05_s_at	0.8165548	SGN-U465447
C1321_s_at	0.815958	SGN-U421311
C9306_at	0.8154697	No available
DV160322_at	0.8149587	SGN-U448484
C9379_at	0.8123205	SGN-U425837
EB448899_at	0.8119523	SGN-U456421
C1296_at	0.811719	SGN-U427321
C2605_x_at	0.8111676	No available
EB683170_at	0.8102962	SGN-U498380
C8723_s_at	0.8099842	SGN-U430974
C3508_at	0.8097017	SGN-U449682
C461_x_at	0.808934	SGN-U427666
C1870_at	0.8074367	SGN-U437059
C4897_x_at	0.8055853	SGN-U424893
C10537_at	0.8053906	SGN-U438254
C9634_at	0.8037207	SGN-U423218
CV020189_s_at	0.8035784	SGN-U451838
AW351426_at	0.8025823	SGN-U442095
DV159764_at	0.80203	SGN-U438652
DW004150_at	0.801692	SGN-U449428
C3853_at	0.8013306	SGN-U428158
CV019160_s_at	0.8012682	SGN-U446194
EB683193_at	0.8011743	SGN-U430415

Correlation Type:

Negative correlations (13 templates correlated)

Template	Pearson	Internal Mapping
C1251_at	-0.8662516	SGN-U423509
C1026_at	-0.8592561	SGN-U437882
TT05_O10_at	-0.8589522	SGN-U451695
TT12_N20_at	-0.8550032	SGN-U447405
C3356_at	-0.8401142	SGN-U436180
EB677884_s_at	-0.8355647	No available
EB677604_at	-0.8246642	SGN-U466134
EB430672_at	-0.819987	SGN-U433867
C8336_at	-0.81929	SGN-U439955
EB677226_at	-0.8108417	SGN-U468956
EB677828_at	-0.8091546	SGN-U505575
C5687_at	-0.8088729	SGN-U448445
C3733_at	-0.8063373	SGN-U422637

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