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Expression Template: EB445645_at

Template Basic Information

Template name:	EB445645_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U497773
External db links:	GenBank: EB445645

Annotations for unigene SGN-U497773 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB445645_at_probe_01	PM	data not available	data not available	1
EB445645_at_probe_02	PM	data not available	data not available	1
EB445645_at_probe_03	PM	data not available	data not available	1
EB445645_at_probe_04	PM	data not available	data not available	1
EB445645_at_probe_05	PM	data not available	data not available	1
EB445645_at_probe_06	PM	data not available	data not available	1
EB445645_at_probe_07	PM	data not available	data not available	1
EB445645_at_probe_08	PM	data not available	data not available	1
EB445645_at_probe_09	PM	data not available	data not available	1
EB445645_at_probe_10	PM	data not available	data not available	1
EB445645_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	6.93	6.86	0.18	0.03
	TobEA vegetative shoot apex	shoot apex	8	8	7.44	7.37	0.15	0.02
	TobEA closed bud	flower bud	5	5	6.85	6.90	0.27	0.04
	TobEA open bud	flower bud	5	5	6.56	6.51	0.28	0.04
	TobEA cotyledons	cotyledon	5	5	6.21	6.28	0.53	0.09
	TobEA flower	flower	5	5	6.76	6.76	0.34	0.05
	TobEA lower stem	stem internode	5	5	7.07	7.08	0.27	0.04
	TobEA upper stem	stem internode	5	5	6.53	6.49	0.21	0.03
	TobEA cauline leaf	cauline leaf	5	5	7.74	7.80	0.15	0.02
	TobEA early senescent leaf	adult vascular leaf	5	5	7.64	7.58	0.23	0.03
	TobEA late senescent leaf	adult vascular leaf	5	5	7.84	7.84	0.31	0.04
	TobEA mature leaf	adult vascular leaf	5	5	7.93	8.02	0.20	0.02
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	7.61	7.46	0.32	0.04
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	7.83	7.76	0.16	0.02
	TobEA young leaf	juvenile vascular leaf	5	5	7.02	6.95	0.18	0.03
	TobEA mature root	root	5	5	6.74	6.78	0.15	0.02
	TobEA young root	root	6	6	6.61	6.62	0.32	0.05
	TobEA seed	seed	6	6	8.25	8.28	0.13	0.02
	TobEA young shoot	shoot system	5	5	6.28	6.19	0.27	0.04

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 144.CEL	6.7551937	0.001	P
	Atlas 145.CEL	7.0993032	0.002	P
	Atlas 146.CEL	6.787616	0.002	P
	Atlas 143.CEL	6.862572	0.001	P
	Atlas 147.CEL	7.1271944	7e-4	P
TobEA vegetative shoot apex	Atlas 58.CEL	7.5446553	0.001	P
	Atlas 59.CEL	7.3504786	2e-4	P
	Atlas 247.CEL	7.2484365	0.002	P
	Atlas 249.CEL	7.714462	7e-4	P
	Atlas 250.CEL	7.5517044	0.002	P
	Atlas 61.CEL	7.3373404	0.001	P
	Atlas 246.CEL	7.391255	7e-4	P
	Atlas 248.CEL	7.3586164	7e-4	P
TobEA closed bud	Atlas 161.CEL	6.9228067	7e-4	P
	Atlas 173.CEL	6.467374	0.008	P
	Atlas 163.CEL	7.2029514	0.004	P
	Atlas 199.CEL	6.897324	7e-4	P
	Atlas 195.CEL	6.7461805	0.006	P
TobEA open bud	Atlas 159.CEL	6.506524	0.001	P
	Atlas 244.CEL	6.981297	0.003	P
	Atlas 171.CEL	6.342759	0.002	P
	Atlas 167.CEL	6.297114	0.014	P
	Atlas 169.CEL	6.6496935	0.014	P
TobEA cotyledons	Atlas 69.CEL	6.2779226	0.046	P
	Atlas 70.CEL	5.365853	0.195	A
	Atlas 71.CEL	6.807335	0.046	P
	Atlas 74.CEL	6.4174137	0.081	A
	Atlas 75.CEL	6.206481	0.112	A
TobEA flower	Atlas 158.CEL	6.4902525	7e-4	P
	Atlas 165.CEL	7.2342396	7e-4	P
	Atlas 197.CEL	6.383746	0.030	P
	Atlas 198.CEL	6.9081626	0.008	P
	Atlas 166.CEL	6.7612634	2e-4	P
TobEA lower stem	Atlas 174.CEL	7.144466	0.001	P
	Atlas 200.CEL	6.7079687	0.003	P
	Atlas 164.CEL	7.4406004	0.001	P
	Atlas 172.CEL	7.080804	0.001	P
	Atlas 245.CEL	6.9703765	7e-4	P
TobEA upper stem	Atlas 160.CEL	6.4924097	0.019	P
	Atlas 168.CEL	6.4552393	0.006	P
	Atlas 170.CEL	6.347377	7e-4	P
	Atlas 162.CEL	6.8923388	0.006	P
	Atlas 196.CEL	6.4867673	0.030	P
TobEA cauline leaf	Atlas 233.CEL	7.8043413	2e-4	P
	Atlas 231.CEL	7.8866367	0.001	P
	Atlas 237.CEL	7.525237	2e-4	P
	Atlas 229.CEL	7.642065	2e-4	P
	Atlas 235.CEL	7.8497214	0.002	P
TobEA early senescent leaf	Atlas 187.CEL	7.8251753	2e-4	P
	Atlas 191.CEL	7.5821333	7e-4	P
	Atlas 183.CEL	7.3900146	7e-4	P
	Atlas 175.CEL	7.4937954	2e-4	P
	Atlas 182.CEL	7.9255743	2e-4	P
TobEA late senescent leaf	Atlas 179.CEL	7.840067	7e-4	P
	Atlas 186.CEL	8.208171	2e-4	P
	Atlas 190.CEL	8.077436	0.002	P
	Atlas 178.CEL	7.626908	2e-4	P
	Atlas 194.CEL	7.467946	2e-4	P
TobEA mature leaf	Atlas 96.CEL	8.096076	2e-4	P
	Atlas 93.CEL	7.750927	0.002	P
	Atlas 94.CEL	7.67557	2e-4	P
	Atlas 97.CEL	8.0206995	2e-4	P
	Atlas 95.CEL	8.08347	2e-4	P
TobEA mid/early senescent leaf	Atlas 184.CEL	7.8505526	2e-4	P
	Atlas 176.CEL	7.4464808	2e-4	P
	Atlas 181.CEL	7.267331	2e-4	P
	Atlas 188.CEL	8.05149	2e-4	P
	Atlas 192.CEL	7.4587803	2e-4	P
TobEA mid/late senescent leaf	Atlas 177.CEL	7.7609105	2e-4	P
	Atlas 180.CEL	8.071256	2e-4	P
	Atlas 189.CEL	7.9106693	2e-4	P
	Atlas 193.CEL	7.663262	2e-4	P
	Atlas 185.CEL	7.7276278	2e-4	P
TobEA young leaf	Atlas 53.CEL	7.3452835	2e-4	P
	Atlas 56.CEL	6.8925514	0.001	P
	Atlas 54.CEL	6.9999056	2e-4	P
	Atlas 55.CEL	6.9337497	0.003	P
	Atlas 57.CEL	6.9483557	2e-4	P
TobEA mature root	Atlas 67.CEL	6.4941235	0.008	P
	Atlas 64.CEL	6.7845025	0.002	P
	Atlas 63.CEL	6.853225	7e-4	P
	Atlas 65.CEL	6.860516	0.002	P
	Atlas 66.CEL	6.690143	0.003	P
TobEA young root	Atlas 39.CEL	7.0484543	2e-4	P
	Atlas 40.CEL	6.2353005	0.002	P
	Atlas 41.CEL	6.8499074	0.002	P
	Atlas 43.CEL	6.2685666	0.004	P
	Atlas 42.CEL	6.660275	0.002	P
	Atlas 44.CEL	6.586479	0.003	P
TobEA seed	Atlas 79.CEL	8.251334	2e-4	P
	Atlas 98.CEL	8.351086	2e-4	P
	Atlas 76.CEL	8.317464	2e-4	P
	Atlas 77.CEL	8.19243	2e-4	P
	Atlas 78.CEL	8.02649	2e-4	P
	Atlas 99.CEL	8.383709	2e-4	P
TobEA young shoot	Atlas 86.CEL	6.053051	0.008	P
	Atlas 88.CEL	6.018663	0.068	A
	Atlas 89.CEL	6.5786576	0.008	P
	Atlas 87.CEL	6.540889	0.056	M
	Atlas 90.CEL	6.188371	0.019	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (32 templates correlated)

Template	Pearson	Internal Mapping
C6319_at	0.8412146	SGN-U444957
EB446367_at	0.8390492	SGN-U428135
EB431405_at	0.8353843	SGN-U448958
C1076_at	0.8343785	SGN-U471929
TT04_E08_at	0.831694	SGN-U456683
C10337_at	0.8291667	SGN-U446129
EB679154_at	0.8267213	SGN-U459034
BP534304_at	0.8264425	SGN-U439390
TT06_M23_at	0.8253078	SGN-U421555
C8448_at	0.8217823	SGN-U437026
EB443948_at	0.821679	SGN-U432481
TT41_O06_at	0.8213605	SGN-U435425
TT31_K22_at	0.8202596	SGN-U453949
C1291_at	0.8152429	SGN-U449597
BP530971_at	0.8152238	SGN-U464068
C10301_at	0.8112153	No available
EB429370_at	0.8109078	SGN-U442642
C6952_at	0.810338	SGN-U439494
EB447975_at	0.8094496	SGN-U426608
C8458_s_at	0.808149	SGN-U421197
C7681_at	0.8074623	SGN-U426896
AJ718921_s_at	0.8072743	SGN-U441117
TT21_N05_at	0.805625	SGN-U448003
C392_s_at	0.8048384	SGN-U433985
EB429639_at	0.8041701	SGN-U431787
BP532151_at	0.803564	SGN-U448657
C11216_at	0.803455	SGN-U449526
BP530315_at	0.8032545	SGN-U449451
EB429370_s_at	0.801738	SGN-U442642
TT23_L03_at	0.801483	SGN-U444844
TT16_N22_at	0.8010172	SGN-U441437
C8828_s_at	0.8009363	SGN-U428741

Correlation Type:

Negative correlations (3 templates correlated)

Template	Pearson	Internal Mapping
C6125_at	-0.8048785	SGN-U425050
C461_at	-0.8047954	SGN-U427666
C3808_at	-0.8006176	SGN-U435447

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