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Expression Template: EB445523_at

Template Basic Information

Template name:	EB445523_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U435433
External db links:	GenBank: EB445523

Annotations for unigene SGN-U435433 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB445523_at_probe_01	PM	data not available	data not available	1
EB445523_at_probe_02	PM	data not available	data not available	1
EB445523_at_probe_03	PM	data not available	data not available	1
EB445523_at_probe_04	PM	data not available	data not available	1
EB445523_at_probe_05	PM	data not available	data not available	1
EB445523_at_probe_06	PM	data not available	data not available	1
EB445523_at_probe_07	PM	data not available	data not available	1
EB445523_at_probe_08	PM	data not available	data not available	1
EB445523_at_probe_09	PM	data not available	data not available	1
EB445523_at_probe_10	PM	data not available	data not available	1
EB445523_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	5.11	5.07	0.41	0.08
	TobEA vegetative shoot apex	shoot apex	8	8	4.45	4.54	0.75	0.17
	TobEA closed bud	flower bud	5	5	5.21	5.21	0.77	0.15
	TobEA open bud	flower bud	5	5	4.50	4.67	0.38	0.09
	TobEA cotyledons	cotyledon	5	5	4.71	5.39	1.38	0.29
	TobEA flower	flower	5	5	4.84	5.05	0.40	0.08
	TobEA lower stem	stem internode	5	5	5.96	5.76	0.86	0.14
	TobEA upper stem	stem internode	5	5	4.53	4.45	0.46	0.10
	TobEA cauline leaf	cauline leaf	5	5	3.77	4.44	1.48	0.39
	TobEA early senescent leaf	adult vascular leaf	5	5	5.44	5.12	0.96	0.18
	TobEA late senescent leaf	adult vascular leaf	5	5	4.83	4.99	0.80	0.16
	TobEA mature leaf	adult vascular leaf	5	5	4.56	4.59	0.76	0.17
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	4.52	4.55	0.62	0.14
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	4.57	4.71	0.41	0.09
	TobEA young leaf	juvenile vascular leaf	5	5	4.92	5.26	1.03	0.21
	TobEA mature root	root	5	5	10.55	10.44	0.66	0.06
	TobEA young root	root	6	6	9.68	9.67	0.45	0.05
	TobEA seed	seed	6	6	4.40	4.67	0.94	0.21
	TobEA young shoot	shoot system	5	5	3.99	4.36	1.29	0.32

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 145.CEL	5.757327	0.081	A
	Atlas 146.CEL	5.065881	0.046	P
	Atlas 143.CEL	5.083546	0.011	P
	Atlas 147.CEL	5.0196047	0.019	P
	Atlas 144.CEL	4.610904	0.004	P
TobEA vegetative shoot apex	Atlas 246.CEL	4.9549055	0.112	A
	Atlas 249.CEL	3.9346142	0.150	A
	Atlas 58.CEL	3.1104898	0.195	A
	Atlas 59.CEL	5.345385	0.008	P
	Atlas 61.CEL	4.903842	0.056	M
	Atlas 248.CEL	4.177684	0.064	M
	Atlas 247.CEL	5.098447	0.081	A
	Atlas 250.CEL	4.0619707	0.130	A
TobEA closed bud	Atlas 163.CEL	6.344392	2e-4	P
	Atlas 161.CEL	4.845463	0.038	P
	Atlas 173.CEL	5.209848	0.112	A
	Atlas 195.CEL	5.4242926	0.014	P
	Atlas 199.CEL	4.250913	0.004	P
TobEA open bud	Atlas 159.CEL	4.814998	0.130	A
	Atlas 167.CEL	4.3696885	0.171	A
	Atlas 171.CEL	4.670239	0.081	A
	Atlas 169.CEL	4.7491794	0.019	P
	Atlas 244.CEL	3.8831375	0.030	P
TobEA cotyledons	Atlas 70.CEL	2.620315	0.634	A
	Atlas 71.CEL	5.6922665	0.334	A
	Atlas 74.CEL	5.3916826	0.038	P
	Atlas 69.CEL	5.845608	2e-4	P
	Atlas 75.CEL	3.984213	0.466	A
TobEA flower	Atlas 165.CEL	5.046753	0.274	A
	Atlas 198.CEL	5.084073	0.014	P
	Atlas 158.CEL	4.3790736	0.008	P
	Atlas 166.CEL	5.238196	0.171	A
	Atlas 197.CEL	4.443126	0.081	A
TobEA lower stem	Atlas 164.CEL	7.4258547	2e-4	P
	Atlas 200.CEL	5.150238	0.081	A
	Atlas 245.CEL	5.6410556	0.001	P
	Atlas 172.CEL	5.7619553	0.006	P
	Atlas 174.CEL	5.8270273	0.008	P
TobEA upper stem	Atlas 160.CEL	3.9615614	0.195	A
	Atlas 196.CEL	4.390492	0.081	A
	Atlas 168.CEL	4.4528723	0.081	A
	Atlas 162.CEL	5.225554	2e-4	P
	Atlas 170.CEL	4.6299324	0.112	A
TobEA cauline leaf	Atlas 235.CEL	3.5285938	0.195	A
	Atlas 231.CEL	1.2864962	0.805	A
	Atlas 233.CEL	4.44177	0.081	A
	Atlas 229.CEL	4.6882596	0.008	P
	Atlas 237.CEL	4.9083714	0.030	P
TobEA early senescent leaf	Atlas 175.CEL	5.1156917	0.014	P
	Atlas 183.CEL	6.5093637	0.304	A
	Atlas 187.CEL	6.3362184	0.334	A
	Atlas 191.CEL	4.9865975	0.274	A
	Atlas 182.CEL	4.228845	0.195	A
TobEA late senescent leaf	Atlas 179.CEL	5.5271688	0.195	A
	Atlas 194.CEL	4.9947352	0.030	P
	Atlas 178.CEL	4.375572	0.030	P
	Atlas 186.CEL	3.69203	0.500	A
	Atlas 190.CEL	5.5470223	0.030	P
TobEA mature leaf	Atlas 94.CEL	3.8582075	0.219	A
	Atlas 95.CEL	5.495267	0.024	P
	Atlas 93.CEL	5.096792	0.003	P
	Atlas 96.CEL	4.5865226	0.030	P
	Atlas 97.CEL	3.7407277	0.150	A
TobEA mid/early senescent leaf	Atlas 192.CEL	4.017393	0.130	A
	Atlas 176.CEL	4.6502714	0.150	A
	Atlas 184.CEL	4.5534034	0.195	A
	Atlas 188.CEL	5.481673	0.036	P
	Atlas 181.CEL	3.9186196	0.568	A
TobEA mid/late senescent leaf	Atlas 177.CEL	4.7325077	0.171	A
	Atlas 180.CEL	4.0661063	0.466	A
	Atlas 185.CEL	4.2554173	0.432	A
	Atlas 189.CEL	4.7083826	0.304	A
	Atlas 193.CEL	5.105349	0.030	P
TobEA young leaf	Atlas 53.CEL	5.561878	0.030	P
	Atlas 56.CEL	5.0828147	0.130	A
	Atlas 55.CEL	5.5636816	0.030	P
	Atlas 57.CEL	3.106207	0.219	A
	Atlas 54.CEL	5.262329	0.006	P
TobEA mature root	Atlas 64.CEL	11.554197	2e-4	P
	Atlas 66.CEL	10.436632	2e-4	P
	Atlas 67.CEL	10.140769	2e-4	P
	Atlas 63.CEL	9.837212	2e-4	P
	Atlas 65.CEL	10.768543	2e-4	P
TobEA young root	Atlas 43.CEL	10.252435	2e-4	P
	Atlas 39.CEL	10.113592	2e-4	P
	Atlas 41.CEL	9.733515	2e-4	P
	Atlas 42.CEL	9.608483	2e-4	P
	Atlas 40.CEL	9.2469	2e-4	P
	Atlas 44.CEL	9.143291	7e-4	P
TobEA seed	Atlas 76.CEL	4.9397025	0.068	A
	Atlas 98.CEL	4.6848826	0.112	A
	Atlas 77.CEL	2.6014094	0.500	A
	Atlas 99.CEL	5.241247	0.195	A
	Atlas 78.CEL	4.663667	0.219	A
	Atlas 79.CEL	4.261834	0.150	A
TobEA young shoot	Atlas 86.CEL	1.7272753	0.432	A
	Atlas 90.CEL	4.7131195	0.130	A
	Atlas 87.CEL	4.360827	0.432	A
	Atlas 88.CEL	4.8843045	0.112	A
	Atlas 89.CEL	4.2779403	0.304	A

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (64 templates correlated)

Template	Pearson	Internal Mapping
C113_at	0.8732056	SGN-U439129
C1719_at	0.8661936	SGN-U428121
C96_at	0.8646568	SGN-U422573
C4741_at	0.85771	SGN-U435135
C1543_at	0.855733	SGN-U446333
EB446291_at	0.8541831	SGN-U471894
C1404_at	0.8540629	SGN-U437702
C1333_at	0.8529695	SGN-U447901
C1428_at	0.8528923	SGN-U433749
C1808_x_at	0.8493932	SGN-U449589
DW003943_x_at	0.8486044	SGN-U423019
EB446455_at	0.844351	SGN-U478496
DW001983_at	0.841315	SGN-U427975
DW003911_at	0.840781	SGN-U449040
EB447242_x_at	0.8371763	SGN-U452346
EB443655_at	0.8364833	No available
C8099_x_at	0.8362555	SGN-U463504
C4373_at	0.8358501	SGN-U424161
C1357_at	0.8333527	SGN-U447973
C1428_x_at	0.8318352	SGN-U433749
C4608_x_at	0.829889	SGN-U444943
C111_at	0.8292152	SGN-U445671
EB446846_at	0.8292139	SGN-U435985
DW003611_s_at	0.8287615	SGN-U447021
EB445126_at	0.82687	SGN-U492883
C4676_at	0.826273	SGN-U431826
EB683428_at	0.8262113	SGN-U457319
EB682883_x_at	0.8261976	No available
C4533_x_at	0.8255411	SGN-U446347
EB446426_at	0.8255277	SGN-U479784
DV160111_at	0.8253105	SGN-U438721
C1540_at	0.8243658	SGN-U448451
C1821_at	0.8238135	SGN-U442274
C4521_at	0.8234022	SGN-U444943
BP528462_s_at	0.8234006	SGN-U447917
C4598_at	0.8231414	SGN-U423019
C10910_at	0.8225287	SGN-U439831
EB446697_at	0.8223053	SGN-U464118
C1761_at	0.821427	SGN-U430619
C4693_at	0.8214003	SGN-U440640
C4475_at	0.8185172	SGN-U440960
EB683712_at	0.8181844	SGN-U505082
C4332_at	0.8177485	SGN-U440830
EB445686_at	0.8167019	SGN-U424860
BP528207_at	0.8145823	SGN-U475986
C4489_at	0.8139028	SGN-U448648
EB443226_s_at	0.8138794	SGN-U433749
C4591_at	0.813785	SGN-U433780
C4521_x_at	0.8134031	SGN-U444943
EB443226_x_at	0.8095835	SGN-U433749
DW002011_at	0.8094204	SGN-U466756
C1603_at	0.8086203	SGN-U435998
C8287_at	0.8076021	SGN-U429740
BP534259_at	0.8075024	SGN-U501244
C7131_at	0.8064843	SGN-U464774
C4684_s_at	0.8040892	SGN-U435491
C4357_s_at	0.8032042	SGN-U444667
C1808_at	0.8031335	SGN-U449589
EB446456_s_at	0.802416	SGN-U429805
EB683100_at	0.8017356	SGN-U480184
DW001599_s_at	0.801453	SGN-U444667
EB445915_s_at	0.8006383	SGN-U431412
C4437_at	0.8004807	SGN-U428011
C4525_s_at	0.8001009	SGN-U433780

Correlation Type:

Negative correlations (17 templates correlated)

Template	Pearson	Internal Mapping
AB001559_s_at	-0.8426189	SGN-U442897
C5931_at	-0.8395216	SGN-U425504
C11291_at	-0.8351504	SGN-U430698
C5308_at	-0.8346553	SGN-U437594
AB001542_s_at	-0.8279679	SGN-U443308
C2917_at	-0.8255123	SGN-U422948
EB442117_s_at	-0.8197162	SGN-U449577
CV017132_s_at	-0.816358	SGN-U469965
TT07_E13_s_at	-0.8139908	SGN-U442897
C5237_s_at	-0.8109231	SGN-U449577
TT38_C22_s_at	-0.8083853	No available
C5254_at	-0.8078752	SGN-U449577
AJ632875_s_at	-0.8048029	SGN-U446820
C5865_x_at	-0.8035701	SGN-U449577
C4020_at	-0.8033884	SGN-U443308
C5865_at	-0.8027039	SGN-U449577
C2799_at	-0.8004448	SGN-U436902

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