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Expression Template: EB432184_at

Template Basic Information

Template name:	EB432184_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U446759
External db links:	GenBank: EB432184

Annotations for unigene SGN-U446759 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB432184_at_probe_01	PM	data not available	data not available	1
EB432184_at_probe_02	PM	data not available	data not available	1
EB432184_at_probe_03	PM	data not available	data not available	1
EB432184_at_probe_04	PM	data not available	data not available	1
EB432184_at_probe_05	PM	data not available	data not available	1
EB432184_at_probe_06	PM	data not available	data not available	1
EB432184_at_probe_07	PM	data not available	data not available	1
EB432184_at_probe_08	PM	data not available	data not available	1
EB432184_at_probe_09	PM	data not available	data not available	1
EB432184_at_probe_10	PM	data not available	data not available	1
EB432184_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	8.79	8.93	0.41	0.05
	TobEA vegetative shoot apex	shoot apex	8	8	7.41	7.41	0.51	0.07
	TobEA closed bud	flower bud	5	5	9.13	9.12	0.18	0.02
	TobEA open bud	flower bud	5	5	8.92	8.83	0.29	0.03
	TobEA cotyledons	cotyledon	5	5	6.01	5.72	1.05	0.18
	TobEA flower	flower	5	5	9.61	9.54	0.14	0.01
	TobEA lower stem	stem internode	5	5	8.30	8.21	0.23	0.03
	TobEA upper stem	stem internode	5	5	9.59	9.65	0.45	0.05
	TobEA cauline leaf	cauline leaf	5	5	9.72	9.70	0.24	0.03
	TobEA early senescent leaf	adult vascular leaf	5	5	9.93	9.99	0.35	0.04
	TobEA late senescent leaf	adult vascular leaf	5	5	9.65	9.82	0.55	0.06
	TobEA mature leaf	adult vascular leaf	5	5	9.79	9.62	0.41	0.04
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	9.95	10.27	0.90	0.09
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	9.74	9.71	1.04	0.11
	TobEA young leaf	juvenile vascular leaf	5	5	6.55	6.34	0.42	0.06
	TobEA mature root	root	5	5	8.04	8.06	0.22	0.03
	TobEA young root	root	6	6	7.98	8.16	0.69	0.09
	TobEA seed	seed	6	6	8.83	8.88	0.30	0.03
	TobEA young shoot	shoot system	5	5	6.20	6.26	0.33	0.05

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 143.CEL	9.272355	0.001	P
	Atlas 147.CEL	8.335445	0.003	P
	Atlas 144.CEL	9.01644	0.002	P
	Atlas 145.CEL	8.374528	0.001	P
	Atlas 146.CEL	8.926871	0.001	P
TobEA vegetative shoot apex	Atlas 248.CEL	7.5275264	0.003	P
	Atlas 249.CEL	7.2882066	0.006	P
	Atlas 61.CEL	8.039086	0.002	P
	Atlas 247.CEL	7.81193	0.006	P
	Atlas 59.CEL	6.514303	0.024	P
	Atlas 246.CEL	7.013622	0.011	P
	Atlas 250.CEL	7.1675096	0.004	P
	Atlas 58.CEL	7.88749	0.005	P
TobEA closed bud	Atlas 173.CEL	8.917614	0.002	P
	Atlas 163.CEL	8.994142	0.001	P
	Atlas 195.CEL	9.360968	0.001	P
	Atlas 199.CEL	9.12283	0.002	P
	Atlas 161.CEL	9.25017	0.001	P
TobEA open bud	Atlas 159.CEL	8.682033	0.001	P
	Atlas 169.CEL	8.829976	0.002	P
	Atlas 171.CEL	8.6379	0.001	P
	Atlas 244.CEL	9.102017	0.002	P
	Atlas 167.CEL	9.326687	7e-4	P
TobEA cotyledons	Atlas 74.CEL	6.980799	0.046	P
	Atlas 69.CEL	5.7195945	0.081	A
	Atlas 70.CEL	4.819897	0.334	A
	Atlas 75.CEL	7.225396	0.008	P
	Atlas 71.CEL	5.293965	0.334	A
TobEA flower	Atlas 158.CEL	9.543121	7e-4	P
	Atlas 165.CEL	9.595415	2e-4	P
	Atlas 197.CEL	9.852836	0.001	P
	Atlas 198.CEL	9.5399	7e-4	P
	Atlas 166.CEL	9.528273	7e-4	P
TobEA lower stem	Atlas 164.CEL	8.1986265	0.002	P
	Atlas 174.CEL	8.210587	0.003	P
	Atlas 245.CEL	8.717545	0.002	P
	Atlas 172.CEL	8.17872	0.002	P
	Atlas 200.CEL	8.214321	0.003	P
TobEA upper stem	Atlas 160.CEL	9.802691	2e-4	P
	Atlas 162.CEL	8.943181	2e-4	P
	Atlas 168.CEL	9.648975	7e-4	P
	Atlas 170.CEL	9.412206	7e-4	P
	Atlas 196.CEL	10.158289	7e-4	P
TobEA cauline leaf	Atlas 229.CEL	9.675548	7e-4	P
	Atlas 237.CEL	9.896125	2e-4	P
	Atlas 231.CEL	9.346991	2e-4	P
	Atlas 233.CEL	9.702961	2e-4	P
	Atlas 235.CEL	9.973896	7e-4	P
TobEA early senescent leaf	Atlas 175.CEL	10.359221	2e-4	P
	Atlas 182.CEL	9.998977	2e-4	P
	Atlas 183.CEL	9.991067	2e-4	P
	Atlas 187.CEL	9.390185	7e-4	P
	Atlas 191.CEL	9.916643	2e-4	P
TobEA late senescent leaf	Atlas 178.CEL	10.061575	7e-4	P
	Atlas 186.CEL	8.710187	0.002	P
	Atlas 190.CEL	9.614347	0.001	P
	Atlas 194.CEL	9.819131	7e-4	P
	Atlas 179.CEL	10.033319	2e-4	P
TobEA mature leaf	Atlas 95.CEL	10.26572	2e-4	P
	Atlas 94.CEL	9.356235	2e-4	P
	Atlas 93.CEL	9.506508	2e-4	P
	Atlas 96.CEL	9.618713	2e-4	P
	Atlas 97.CEL	10.184839	2e-4	P
TobEA mid/early senescent leaf	Atlas 176.CEL	10.619566	2e-4	P
	Atlas 181.CEL	8.407409	0.004	P
	Atlas 184.CEL	10.272201	2e-4	P
	Atlas 188.CEL	9.967893	2e-4	P
	Atlas 192.CEL	10.499858	2e-4	P
TobEA mid/late senescent leaf	Atlas 193.CEL	10.726755	2e-4	P
	Atlas 177.CEL	10.841494	2e-4	P
	Atlas 180.CEL	9.709053	2e-4	P
	Atlas 185.CEL	8.75951	0.003	P
	Atlas 189.CEL	8.638249	0.002	P
TobEA young leaf	Atlas 56.CEL	6.819512	0.030	P
	Atlas 55.CEL	6.3406296	0.038	P
	Atlas 53.CEL	6.2724977	0.024	P
	Atlas 54.CEL	7.1539354	0.002	P
	Atlas 57.CEL	6.1617723	0.095	A
TobEA mature root	Atlas 67.CEL	7.7128906	0.024	P
	Atlas 64.CEL	7.9787865	0.006	P
	Atlas 65.CEL	8.161126	0.001	P
	Atlas 63.CEL	8.06073	0.002	P
	Atlas 66.CEL	8.286328	7e-4	P
TobEA young root	Atlas 40.CEL	8.285754	7e-4	P
	Atlas 44.CEL	8.068799	7e-4	P
	Atlas 39.CEL	6.6970925	0.008	P
	Atlas 43.CEL	8.7049	7e-4	P
	Atlas 41.CEL	7.889287	0.002	P
	Atlas 42.CEL	8.255581	0.001	P
TobEA seed	Atlas 79.CEL	8.695243	0.001	P
	Atlas 99.CEL	8.404343	0.004	P
	Atlas 76.CEL	9.131335	0.002	P
	Atlas 78.CEL	9.07294	0.002	P
	Atlas 77.CEL	9.0706005	0.002	P
	Atlas 98.CEL	8.617566	0.002	P
TobEA young shoot	Atlas 89.CEL	6.257538	0.038	P
	Atlas 88.CEL	5.962514	0.068	A
	Atlas 86.CEL	5.8203683	0.095	A
	Atlas 87.CEL	6.324279	0.171	A
	Atlas 90.CEL	6.6597133	0.038	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (14 templates correlated)

Template	Pearson	Internal Mapping
C11684_at	0.8741879	SGN-U459379
BP533293_s_at	0.8262512	SGN-U443881
C5459_s_at	0.8183962	SGN-U448379
TT22_M15_at	0.8174983	SGN-U434534
C4412_at	0.8173964	SGN-U422360
TT09_G09_s_at	0.8173625	SGN-U451258
C9893_at	0.815753	SGN-U450299
DW003771_at	0.8139632	SGN-U448838
DW001926_s_at	0.8137936	SGN-U465544
DW001355_at	0.8123874	SGN-U426591
BP530052_at	0.8119476	SGN-U468596
C212_at	0.8109765	SGN-U434819
DW001355_x_at	0.8102938	SGN-U426591
C7273_at	0.8082321	SGN-U426828

Correlation Type:

Negative correlations (3 templates correlated)

Template	Pearson	Internal Mapping
C641_s_at	-0.8173642	SGN-U446460
C5249_at	-0.8076416	SGN-U423418
EB681719_s_at	-0.8019091	SGN-U425614

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