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Expression Template: EB431262_at

Template Basic Information

Template name:	EB431262_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U493961
External db links:	GenBank: EB431262

Annotations for unigene SGN-U493961 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB431262_at_probe_01	PM	data not available	data not available	1
EB431262_at_probe_02	PM	data not available	data not available	1
EB431262_at_probe_03	PM	data not available	data not available	1
EB431262_at_probe_04	PM	data not available	data not available	1
EB431262_at_probe_05	PM	data not available	data not available	1
EB431262_at_probe_06	PM	data not available	data not available	1
EB431262_at_probe_07	PM	data not available	data not available	1
EB431262_at_probe_08	PM	data not available	data not available	1
EB431262_at_probe_09	PM	data not available	data not available	1
EB431262_at_probe_10	PM	data not available	data not available	1
EB431262_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	7.76	7.79	0.45	0.06
	TobEA vegetative shoot apex	shoot apex	8	8	8.38	8.53	0.62	0.07
	TobEA closed bud	flower bud	5	5	7.57	7.58	0.19	0.02
	TobEA open bud	flower bud	5	5	7.56	7.49	0.19	0.03
	TobEA cotyledons	cotyledon	5	5	6.24	6.51	0.54	0.09
	TobEA flower	flower	5	5	6.26	6.36	0.42	0.07
	TobEA lower stem	stem internode	5	5	6.55	6.48	0.44	0.07
	TobEA upper stem	stem internode	5	5	7.69	7.56	0.34	0.04
	TobEA cauline leaf	cauline leaf	5	5	6.19	6.11	0.48	0.08
	TobEA early senescent leaf	adult vascular leaf	5	5	6.04	5.78	0.63	0.10
	TobEA late senescent leaf	adult vascular leaf	5	5	5.26	5.53	0.73	0.14
	TobEA mature leaf	adult vascular leaf	5	5	6.19	6.06	0.61	0.10
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	5.62	5.68	0.57	0.10
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	5.04	5.54	1.08	0.21
	TobEA young leaf	juvenile vascular leaf	5	5	7.51	7.50	0.31	0.04
	TobEA mature root	root	5	5	6.25	6.51	0.53	0.08
	TobEA young root	root	6	6	6.17	6.14	0.55	0.09
	TobEA seed	seed	6	6	6.11	6.11	0.48	0.08
	TobEA young shoot	shoot system	5	5	7.46	7.51	0.27	0.04

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 146.CEL	7.789514	0.030	P
	Atlas 144.CEL	8.407137	0.019	P
	Atlas 147.CEL	7.3956604	0.011	P
	Atlas 143.CEL	7.9431343	0.006	P
	Atlas 145.CEL	7.2834854	0.019	P
TobEA vegetative shoot apex	Atlas 247.CEL	8.764516	0.011	P
	Atlas 250.CEL	8.977777	0.003	P
	Atlas 61.CEL	8.09913	0.011	P
	Atlas 59.CEL	7.5868344	0.030	P
	Atlas 246.CEL	8.725147	0.011	P
	Atlas 248.CEL	8.32548	0.004	P
	Atlas 249.CEL	9.102366	0.006	P
	Atlas 58.CEL	7.4817915	0.011	P
TobEA closed bud	Atlas 195.CEL	7.6815124	0.011	P
	Atlas 163.CEL	7.584492	0.006	P
	Atlas 199.CEL	7.767427	0.024	P
	Atlas 161.CEL	7.5299234	0.038	P
	Atlas 173.CEL	7.2769065	0.008	P
TobEA open bud	Atlas 159.CEL	7.337213	0.008	P
	Atlas 167.CEL	7.706863	0.006	P
	Atlas 171.CEL	7.453501	0.008	P
	Atlas 244.CEL	7.49076	0.014	P
	Atlas 169.CEL	7.8062596	0.004	P
TobEA cotyledons	Atlas 71.CEL	6.0559664	0.219	A
	Atlas 75.CEL	5.39765	0.195	A
	Atlas 69.CEL	6.507828	0.068	A
	Atlas 70.CEL	6.5078325	0.150	A
	Atlas 74.CEL	6.7513504	0.081	A
TobEA flower	Atlas 197.CEL	6.648987	0.044	P
	Atlas 165.CEL	6.447864	0.081	A
	Atlas 166.CEL	5.544885	0.056	M
	Atlas 198.CEL	6.3552995	0.014	P
	Atlas 158.CEL	6.3010383	0.024	P
TobEA lower stem	Atlas 200.CEL	7.2567887	0.024	P
	Atlas 172.CEL	6.0509152	0.038	P
	Atlas 174.CEL	6.441792	0.150	A
	Atlas 245.CEL	6.5044246	0.046	P
	Atlas 164.CEL	6.482551	0.150	A
TobEA upper stem	Atlas 168.CEL	7.4931445	0.019	P
	Atlas 160.CEL	7.7167788	0.011	P
	Atlas 196.CEL	8.267444	0.008	P
	Atlas 162.CEL	7.5558467	0.014	P
	Atlas 170.CEL	7.419333	0.068	A
TobEA cauline leaf	Atlas 233.CEL	6.877322	0.038	P
	Atlas 229.CEL	5.7762065	0.056	M
	Atlas 235.CEL	6.109447	0.112	A
	Atlas 237.CEL	6.4667177	0.095	A
	Atlas 231.CEL	5.736589	0.112	A
TobEA early senescent leaf	Atlas 183.CEL	7.0190225	0.219	A
	Atlas 187.CEL	5.398136	0.274	A
	Atlas 191.CEL	6.288379	0.038	P
	Atlas 182.CEL	5.784748	0.195	A
	Atlas 175.CEL	5.707736	0.112	A
TobEA late senescent leaf	Atlas 179.CEL	4.187593	0.432	A
	Atlas 186.CEL	5.750917	0.150	A
	Atlas 190.CEL	5.9539604	0.534	A
	Atlas 194.CEL	4.851484	0.150	A
	Atlas 178.CEL	5.533378	0.112	A
TobEA mature leaf	Atlas 96.CEL	6.060973	0.130	A
	Atlas 93.CEL	6.505885	0.014	P
	Atlas 95.CEL	5.4032636	0.046	P
	Atlas 94.CEL	5.9426913	0.150	A
	Atlas 97.CEL	7.0166597	0.068	A
TobEA mid/early senescent leaf	Atlas 176.CEL	5.68469	0.274	A
	Atlas 181.CEL	5.6758585	0.726	A
	Atlas 188.CEL	5.8713927	0.056	M
	Atlas 192.CEL	4.6670084	0.246	A
	Atlas 184.CEL	6.1848526	0.046	P
TobEA mid/late senescent leaf	Atlas 185.CEL	6.1263027	0.195	A
	Atlas 189.CEL	5.7656755	0.195	A
	Atlas 193.CEL	3.7043736	0.399	A
	Atlas 177.CEL	5.537917	0.150	A
	Atlas 180.CEL	4.0700545	0.534	A
TobEA young leaf	Atlas 57.CEL	7.4972115	0.030	P
	Atlas 53.CEL	7.3420253	0.068	A
	Atlas 54.CEL	7.113792	0.024	P
	Atlas 56.CEL	7.9412603	0.014	P
	Atlas 55.CEL	7.656856	0.030	P
TobEA mature root	Atlas 63.CEL	6.6064982	0.095	A
	Atlas 64.CEL	5.5546894	0.304	A
	Atlas 65.CEL	6.758005	0.056	M
	Atlas 66.CEL	6.50973	0.046	P
	Atlas 67.CEL	5.836797	0.112	A
TobEA young root	Atlas 40.CEL	6.0058703	0.046	P
	Atlas 43.CEL	6.0694275	0.095	A
	Atlas 39.CEL	7.101846	0.056	M
	Atlas 41.CEL	6.2479534	0.024	P
	Atlas 42.CEL	5.407985	0.150	A
	Atlas 44.CEL	6.2008977	0.095	A
TobEA seed	Atlas 78.CEL	6.3925014	0.030	P
	Atlas 79.CEL	6.2903743	0.056	M
	Atlas 98.CEL	6.810524	0.008	P
	Atlas 99.CEL	5.741345	0.056	M
	Atlas 76.CEL	5.4807925	0.219	A
	Atlas 77.CEL	5.921669	0.130	A
TobEA young shoot	Atlas 87.CEL	7.1841836	0.024	P
	Atlas 88.CEL	7.509441	0.046	P
	Atlas 90.CEL	7.1926146	0.030	P
	Atlas 86.CEL	7.727093	0.019	P
	Atlas 89.CEL	7.7061167	0.056	M

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (23 templates correlated)

Template	Pearson	Internal Mapping
C11191_at	0.8346277	SGN-U438885
BP132123_at	0.8303734	SGN-U442403
BP533379_at	0.828905	SGN-U431252
EB440404_at	0.827741	SGN-U426511
TT39_P06_at	0.8243943	SGN-U434247
DV158479_at	0.8182522	SGN-U450531
BP134981_at	0.8182286	SGN-U498595
C2687_s_at	0.8181327	SGN-U449743
C11152_at	0.8169873	SGN-U438884
DV159147_s_at	0.8159835	SGN-U438716
DV162210_at	0.8157841	SGN-U468707
C11128_at	0.8129245	SGN-U435654
C7714_at	0.8128154	SGN-U438885
TT07_B20_at	0.8108668	SGN-U431620
C126_at	0.8096326	SGN-U440363
EB446714_s_at	0.809053	SGN-U434311
BP131025_at	0.8060097	SGN-U439723
C11128_x_at	0.8044546	SGN-U435654
C11046_s_at	0.802057	SGN-U446385
C274_at	0.8015992	SGN-U421822
C6756_at	0.8009375	SGN-U423449
MC404_at	0.8005997	No available
EB446714_at	0.800301	SGN-U434311

Correlation Type:

Negative correlations (4 templates correlated)

Template	Pearson	Internal Mapping
C8856_at	-0.8331586	SGN-U438829
EB429745_at	-0.8155054	No available
TT10_H13_at	-0.8112323	SGN-U428001
C2172_at	-0.80281	SGN-U463589

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