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Expression Template: EB426257_at

Template Basic Information

Template name:	EB426257_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U448581
External db links:	GenBank: EB426257

Annotations for unigene SGN-U448581 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
EB426257_at_probe_01	PM	data not available	data not available	1
EB426257_at_probe_02	PM	data not available	data not available	1
EB426257_at_probe_03	PM	data not available	data not available	1
EB426257_at_probe_04	PM	data not available	data not available	1
EB426257_at_probe_05	PM	data not available	data not available	1
EB426257_at_probe_06	PM	data not available	data not available	1
EB426257_at_probe_07	PM	data not available	data not available	1
EB426257_at_probe_08	PM	data not available	data not available	1
EB426257_at_probe_09	PM	data not available	data not available	1
EB426257_at_probe_10	PM	data not available	data not available	1
EB426257_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	7.85	7.89	0.17	0.02
	TobEA vegetative shoot apex	shoot apex	8	8	7.25	7.31	0.65	0.09
	TobEA closed bud	flower bud	5	5	7.44	7.58	0.31	0.04
	TobEA open bud	flower bud	5	5	7.05	6.87	0.46	0.06
	TobEA cotyledons	cotyledon	5	5	6.87	6.80	0.37	0.05
	TobEA flower	flower	5	5	7.58	7.65	0.27	0.04
	TobEA lower stem	stem internode	5	5	7.48	7.58	0.36	0.05
	TobEA upper stem	stem internode	5	5	6.69	6.64	0.19	0.03
	TobEA cauline leaf	cauline leaf	5	5	7.85	7.84	0.23	0.03
	TobEA early senescent leaf	adult vascular leaf	5	5	8.02	8.08	0.40	0.05
	TobEA late senescent leaf	adult vascular leaf	5	5	8.41	8.50	0.33	0.04
	TobEA mature leaf	adult vascular leaf	5	5	8.40	8.42	0.08	0.01
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	8.16	8.19	0.47	0.06
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	8.05	8.13	0.16	0.02
	TobEA young leaf	juvenile vascular leaf	5	5	7.25	7.17	0.35	0.05
	TobEA mature root	root	5	5	7.34	7.27	0.22	0.03
	TobEA young root	root	6	6	7.19	7.24	0.34	0.05
	TobEA seed	seed	6	6	8.98	9.03	0.14	0.02
	TobEA young shoot	shoot system	5	5	6.87	6.88	0.17	0.02

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 143.CEL	7.6826005	2e-4	P
	Atlas 145.CEL	7.9936833	2e-4	P
	Atlas 146.CEL	7.664457	2e-4	P
	Atlas 144.CEL	7.8873286	2e-4	P
	Atlas 147.CEL	8.015122	2e-4	P
TobEA vegetative shoot apex	Atlas 249.CEL	7.605344	2e-4	P
	Atlas 247.CEL	7.3869343	2e-4	P
	Atlas 250.CEL	8.133044	2e-4	P
	Atlas 58.CEL	6.6180067	0.001	P
	Atlas 59.CEL	6.1790566	0.002	P
	Atlas 246.CEL	7.8836646	2e-4	P
	Atlas 248.CEL	7.238276	2e-4	P
	Atlas 61.CEL	6.9244003	7e-4	P
TobEA closed bud	Atlas 163.CEL	7.611719	2e-4	P
	Atlas 173.CEL	6.9034247	0.003	P
	Atlas 195.CEL	7.469184	2e-4	P
	Atlas 199.CEL	7.6471977	2e-4	P
	Atlas 161.CEL	7.5807347	2e-4	P
TobEA open bud	Atlas 167.CEL	7.709055	2e-4	P
	Atlas 169.CEL	6.8680797	0.002	P
	Atlas 244.CEL	6.732035	0.001	P
	Atlas 171.CEL	7.3323517	2e-4	P
	Atlas 159.CEL	6.6216817	0.001	P
TobEA cotyledons	Atlas 70.CEL	6.471444	0.019	P
	Atlas 71.CEL	6.895827	0.014	P
	Atlas 74.CEL	6.7118797	0.002	P
	Atlas 75.CEL	6.798997	0.011	P
	Atlas 69.CEL	7.464565	7e-4	P
TobEA flower	Atlas 158.CEL	7.4992857	2e-4	P
	Atlas 165.CEL	7.675908	2e-4	P
	Atlas 166.CEL	7.1759033	2e-4	P
	Atlas 197.CEL	7.645585	2e-4	P
	Atlas 198.CEL	7.893998	0.001	P
TobEA lower stem	Atlas 172.CEL	7.5848956	2e-4	P
	Atlas 200.CEL	7.86739	2e-4	P
	Atlas 174.CEL	7.3667088	0.003	P
	Atlas 245.CEL	7.6675515	2e-4	P
	Atlas 164.CEL	6.927132	2e-4	P
TobEA upper stem	Atlas 168.CEL	6.446242	0.003	P
	Atlas 170.CEL	6.750055	0.002	P
	Atlas 196.CEL	6.9588075	2e-4	P
	Atlas 160.CEL	6.638089	0.001	P
	Atlas 162.CEL	6.639675	0.004	P
TobEA cauline leaf	Atlas 231.CEL	7.8365407	7e-4	P
	Atlas 235.CEL	7.532348	7e-4	P
	Atlas 233.CEL	7.982519	7e-4	P
	Atlas 229.CEL	7.7600236	2e-4	P
	Atlas 237.CEL	8.133273	2e-4	P
TobEA early senescent leaf	Atlas 182.CEL	7.9210305	2e-4	P
	Atlas 191.CEL	8.501649	2e-4	P
	Atlas 175.CEL	8.181472	7e-4	P
	Atlas 183.CEL	7.422951	0.002	P
	Atlas 187.CEL	8.084886	0.008	P
TobEA late senescent leaf	Atlas 179.CEL	8.52749	2e-4	P
	Atlas 186.CEL	8.087859	0.003	P
	Atlas 194.CEL	8.502072	2e-4	P
	Atlas 178.CEL	8.071415	2e-4	P
	Atlas 190.CEL	8.865156	7e-4	P
TobEA mature leaf	Atlas 96.CEL	8.4795685	2e-4	P
	Atlas 93.CEL	8.442051	2e-4	P
	Atlas 94.CEL	8.3780365	2e-4	P
	Atlas 97.CEL	8.284425	2e-4	P
	Atlas 95.CEL	8.424594	2e-4	P
TobEA mid/early senescent leaf	Atlas 181.CEL	7.9479113	0.001	P
	Atlas 184.CEL	7.4961863	7e-4	P
	Atlas 176.CEL	8.189751	2e-4	P
	Atlas 188.CEL	8.455041	0.001	P
	Atlas 192.CEL	8.712225	7e-4	P
TobEA mid/late senescent leaf	Atlas 180.CEL	7.8014507	2e-4	P
	Atlas 189.CEL	7.9789486	2e-4	P
	Atlas 177.CEL	8.130556	7e-4	P
	Atlas 193.CEL	8.165277	2e-4	P
	Atlas 185.CEL	8.153199	7e-4	P
TobEA young leaf	Atlas 53.CEL	7.338282	2e-4	P
	Atlas 54.CEL	6.900272	2e-4	P
	Atlas 55.CEL	7.043688	2e-4	P
	Atlas 56.CEL	7.171122	2e-4	P
	Atlas 57.CEL	7.810332	7e-4	P
TobEA mature root	Atlas 63.CEL	7.7170644	2e-4	P
	Atlas 64.CEL	7.20105	0.003	P
	Atlas 67.CEL	7.1985793	0.006	P
	Atlas 65.CEL	7.266683	2e-4	P
	Atlas 66.CEL	7.325331	2e-4	P
TobEA young root	Atlas 39.CEL	7.0281096	0.002	P
	Atlas 41.CEL	6.6854773	2e-4	P
	Atlas 44.CEL	7.4444017	7e-4	P
	Atlas 40.CEL	7.5460987	7e-4	P
	Atlas 42.CEL	7.442642	2e-4	P
	Atlas 43.CEL	7.0080295	2e-4	P
TobEA seed	Atlas 98.CEL	8.857547	2e-4	P
	Atlas 99.CEL	9.113254	2e-4	P
	Atlas 76.CEL	9.085104	2e-4	P
	Atlas 77.CEL	8.973776	2e-4	P
	Atlas 79.CEL	8.787133	7e-4	P
	Atlas 78.CEL	9.091339	2e-4	P
TobEA young shoot	Atlas 86.CEL	6.880155	0.001	P
	Atlas 87.CEL	6.993632	0.001	P
	Atlas 88.CEL	6.5958943	2e-4	P
	Atlas 89.CEL	7.0210505	0.004	P
	Atlas 90.CEL	6.8475256	7e-4	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (3 templates correlated)

Template	Pearson	Internal Mapping
BP534304_at	0.8052982	SGN-U439390
TT06_M23_at	0.804978	SGN-U421555
C10739_at	0.8025316	SGN-U424386

Correlation Type:

Negative correlations (4 templates correlated)

Template	Pearson	Internal Mapping
C461_at	-0.845544	SGN-U427666
C461_x_at	-0.8435878	SGN-U427666
C6060_at	-0.8085317	SGN-U435272
C4731_at	-0.8023305	SGN-U428159

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