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Expression Template: DV999343_x_at

Template Basic Information

Template name:	DV999343_x_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U448771
External db links:	GenBank: DV999343

Annotations for unigene SGN-U448771 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
DV999343_x_at_probe_01	PM	data not available	data not available	1
DV999343_x_at_probe_02	PM	data not available	data not available	1
DV999343_x_at_probe_03	PM	data not available	data not available	1
DV999343_x_at_probe_04	PM	data not available	data not available	1
DV999343_x_at_probe_05	PM	data not available	data not available	1
DV999343_x_at_probe_06	PM	data not available	data not available	1
DV999343_x_at_probe_07	PM	data not available	data not available	1
DV999343_x_at_probe_08	PM	data not available	data not available	1
DV999343_x_at_probe_09	PM	data not available	data not available	1
DV999343_x_at_probe_10	PM	data not available	data not available	1
DV999343_x_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	7.33	7.37	0.13	0.02
	TobEA vegetative shoot apex	shoot apex	8	8	7.33	7.31	0.68	0.09
	TobEA closed bud	flower bud	5	5	7.04	7.10	0.39	0.06
	TobEA open bud	flower bud	5	5	6.93	6.90	0.43	0.06
	TobEA cotyledons	cotyledon	5	5	6.72	6.58	0.53	0.08
	TobEA flower	flower	5	5	7.18	7.32	0.53	0.07
	TobEA lower stem	stem internode	5	5	6.99	7.12	0.43	0.06
	TobEA upper stem	stem internode	5	5	6.58	6.68	0.43	0.07
	TobEA cauline leaf	cauline leaf	5	5	5.81	5.75	0.26	0.05
	TobEA early senescent leaf	adult vascular leaf	5	5	6.99	6.82	0.43	0.06
	TobEA late senescent leaf	adult vascular leaf	5	5	7.03	7.20	0.74	0.11
	TobEA mature leaf	adult vascular leaf	5	5	7.15	7.07	0.28	0.04
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	6.39	6.35	0.43	0.07
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	5.90	5.44	1.17	0.20
	TobEA young leaf	juvenile vascular leaf	5	5	7.40	7.43	0.33	0.04
	TobEA mature root	root	5	5	7.20	7.13	0.20	0.03
	TobEA young root	root	6	6	6.70	6.55	0.63	0.09
	TobEA seed	seed	6	6	8.35	8.38	0.14	0.02
	TobEA young shoot	shoot system	5	5	7.03	7.04	0.33	0.05

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 143.CEL	7.481343	0.006	P
	Atlas 145.CEL	7.3946996	0.019	P
	Atlas 147.CEL	7.131888	0.004	P
	Atlas 144.CEL	7.2649193	0.006	P
	Atlas 146.CEL	7.3749757	0.006	P
TobEA vegetative shoot apex	Atlas 250.CEL	8.558588	0.002	P
	Atlas 58.CEL	6.7364316	0.008	P
	Atlas 61.CEL	7.3012414	0.001	P
	Atlas 249.CEL	7.31118	0.004	P
	Atlas 59.CEL	6.2569723	0.002	P
	Atlas 247.CEL	7.6796975	0.003	P
	Atlas 248.CEL	7.5558615	2e-4	P
	Atlas 246.CEL	7.257637	0.011	P
TobEA closed bud	Atlas 163.CEL	6.8304486	0.019	P
	Atlas 195.CEL	7.595298	0.002	P
	Atlas 199.CEL	7.101273	0.006	P
	Atlas 161.CEL	6.5452943	0.003	P
	Atlas 173.CEL	7.1060286	0.017	P
TobEA open bud	Atlas 167.CEL	7.6054125	0.008	P
	Atlas 169.CEL	7.0182114	0.002	P
	Atlas 159.CEL	6.5905204	0.019	P
	Atlas 171.CEL	6.897841	0.006	P
	Atlas 244.CEL	6.523677	0.011	P
TobEA cotyledons	Atlas 69.CEL	7.5646615	0.003	P
	Atlas 70.CEL	6.5781217	0.019	P
	Atlas 74.CEL	6.869655	0.002	P
	Atlas 71.CEL	6.1889105	2e-4	P
	Atlas 75.CEL	6.396841	0.046	P
TobEA flower	Atlas 165.CEL	7.0078897	2e-4	P
	Atlas 166.CEL	6.3947086	0.019	P
	Atlas 158.CEL	7.8220005	0.014	P
	Atlas 197.CEL	7.3187885	7e-4	P
	Atlas 198.CEL	7.3434567	2e-4	P
TobEA lower stem	Atlas 200.CEL	7.121058	0.014	P
	Atlas 172.CEL	6.8535	0.004	P
	Atlas 174.CEL	7.2161865	0.002	P
	Atlas 245.CEL	7.424811	0.006	P
	Atlas 164.CEL	6.3151355	0.006	P
TobEA upper stem	Atlas 160.CEL	6.2694945	0.002	P
	Atlas 196.CEL	6.678378	0.001	P
	Atlas 162.CEL	6.031482	0.038	P
	Atlas 168.CEL	6.838708	0.006	P
	Atlas 170.CEL	7.106812	0.006	P
TobEA cauline leaf	Atlas 233.CEL	6.2236195	0.008	P
	Atlas 231.CEL	5.750225	0.004	P
	Atlas 235.CEL	5.6383324	0.004	P
	Atlas 229.CEL	5.893474	0.008	P
	Atlas 237.CEL	5.5489664	0.029	P
TobEA early senescent leaf	Atlas 175.CEL	6.656592	0.006	P
	Atlas 183.CEL	6.8199177	0.003	P
	Atlas 191.CEL	7.7260427	0.006	P
	Atlas 182.CEL	6.768542	7e-4	P
	Atlas 187.CEL	6.963098	0.002	P
TobEA late senescent leaf	Atlas 178.CEL	7.1974607	0.003	P
	Atlas 186.CEL	5.784054	0.166	A
	Atlas 194.CEL	7.1241755	0.001	P
	Atlas 179.CEL	7.2449474	0.001	P
	Atlas 190.CEL	7.787424	0.006	P
TobEA mature leaf	Atlas 94.CEL	6.91532	0.006	P
	Atlas 96.CEL	6.8849187	0.006	P
	Atlas 97.CEL	7.070259	0.001	P
	Atlas 93.CEL	7.4961433	0.003	P
	Atlas 95.CEL	7.3823876	0.006	P
TobEA mid/early senescent leaf	Atlas 181.CEL	6.3541226	0.171	A
	Atlas 184.CEL	5.8843236	0.004	P
	Atlas 192.CEL	6.187064	0.014	P
	Atlas 176.CEL	6.4715714	0.003	P
	Atlas 188.CEL	7.045404	0.014	P
TobEA mid/late senescent leaf	Atlas 180.CEL	5.3431535	0.030	P
	Atlas 177.CEL	5.437248	0.014	P
	Atlas 189.CEL	7.5590005	0.008	P
	Atlas 185.CEL	6.5826325	0.024	P
	Atlas 193.CEL	4.588883	0.008	P
TobEA young leaf	Atlas 55.CEL	7.4252396	0.004	P
	Atlas 56.CEL	7.238466	0.006	P
	Atlas 53.CEL	7.8536477	0.008	P
	Atlas 54.CEL	7.508413	0.008	P
	Atlas 57.CEL	6.966831	0.008	P
TobEA mature root	Atlas 67.CEL	7.3266	0.011	P
	Atlas 64.CEL	7.0949845	0.044	P
	Atlas 65.CEL	7.134238	0.008	P
	Atlas 63.CEL	7.4714355	0.001	P
	Atlas 66.CEL	6.976956	0.006	P
TobEA young root	Atlas 40.CEL	6.4198914	0.014	P
	Atlas 44.CEL	6.4319773	0.011	P
	Atlas 41.CEL	7.3421063	0.002	P
	Atlas 42.CEL	6.666	0.004	P
	Atlas 39.CEL	7.5117736	0.008	P
	Atlas 43.CEL	5.834823	0.014	P
TobEA seed	Atlas 77.CEL	8.404814	0.004	P
	Atlas 79.CEL	8.391959	0.003	P
	Atlas 99.CEL	8.529435	0.004	P
	Atlas 76.CEL	8.127003	7e-4	P
	Atlas 78.CEL	8.262077	0.004	P
	Atlas 98.CEL	8.365519	0.006	P
TobEA young shoot	Atlas 86.CEL	6.7279305	0.002	P
	Atlas 88.CEL	7.206377	0.011	P
	Atlas 89.CEL	7.475555	0.006	P
	Atlas 87.CEL	6.6866264	0.003	P
	Atlas 90.CEL	7.039036	0.019	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (5 templates correlated)

Template	Pearson	Internal Mapping
AJ717999_s_at	0.8528511	SGN-U444480
BP532537_at	0.839402	SGN-U461396
DV159657_s_at	0.8274897	SGN-U449273
EB431055_x_at	0.8113013	SGN-U449273
C8052_x_at	0.8049502	SGN-U448429

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