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Expression Template: DV159907_at

Template Basic Information

Template name:	DV159907_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U461378
External db links:	GenBank: DV159907

Annotations for unigene SGN-U461378 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
DV159907_at_probe_01	PM	data not available	data not available	1
DV159907_at_probe_02	PM	data not available	data not available	1
DV159907_at_probe_03	PM	data not available	data not available	1
DV159907_at_probe_04	PM	data not available	data not available	1
DV159907_at_probe_05	PM	data not available	data not available	1
DV159907_at_probe_06	PM	data not available	data not available	1
DV159907_at_probe_07	PM	data not available	data not available	1
DV159907_at_probe_08	PM	data not available	data not available	1
DV159907_at_probe_09	PM	data not available	data not available	1
DV159907_at_probe_10	PM	data not available	data not available	1
DV159907_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	10.37	10.36	0.13	0.01
	TobEA vegetative shoot apex	shoot apex	8	8	10.01	10.25	0.42	0.04
	TobEA closed bud	flower bud	5	5	9.59	9.61	0.27	0.03
	TobEA open bud	flower bud	5	5	9.16	8.95	0.53	0.06
	TobEA cotyledons	cotyledon	5	5	9.72	9.62	0.29	0.03
	TobEA flower	flower	5	5	9.70	9.56	0.28	0.03
	TobEA lower stem	stem internode	5	5	9.74	9.78	0.44	0.04
	TobEA upper stem	stem internode	5	5	8.89	9.08	0.48	0.05
	TobEA cauline leaf	cauline leaf	5	5	8.98	9.05	0.23	0.03
	TobEA early senescent leaf	adult vascular leaf	5	5	10.09	10.29	0.76	0.07
	TobEA late senescent leaf	adult vascular leaf	5	5	10.20	10.14	0.65	0.06
	TobEA mature leaf	adult vascular leaf	5	5	10.19	10.24	0.17	0.02
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	9.81	9.94	0.49	0.05
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	9.48	9.28	0.82	0.09
	TobEA young leaf	juvenile vascular leaf	5	5	10.30	10.27	0.07	0.01
	TobEA mature root	root	5	5	10.18	10.20	0.09	0.01
	TobEA young root	root	6	6	10.16	10.20	0.39	0.04
	TobEA seed	seed	6	6	11.45	11.44	0.13	0.01
	TobEA young shoot	shoot system	5	5	9.85	9.90	0.25	0.03

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 147.CEL	10.362835	2e-4	P
	Atlas 144.CEL	10.559062	2e-4	P
	Atlas 146.CEL	10.314808	2e-4	P
	Atlas 143.CEL	10.4182	2e-4	P
	Atlas 145.CEL	10.203776	2e-4	P
TobEA vegetative shoot apex	Atlas 246.CEL	10.221109	2e-4	P
	Atlas 59.CEL	9.301424	2e-4	P
	Atlas 61.CEL	9.72978	2e-4	P
	Atlas 247.CEL	10.330953	2e-4	P
	Atlas 248.CEL	10.364443	2e-4	P
	Atlas 249.CEL	10.326024	2e-4	P
	Atlas 250.CEL	10.281002	2e-4	P
	Atlas 58.CEL	9.531633	2e-4	P
TobEA closed bud	Atlas 195.CEL	9.919485	2e-4	P
	Atlas 199.CEL	9.774866	2e-4	P
	Atlas 161.CEL	9.333409	2e-4	P
	Atlas 173.CEL	9.314118	2e-4	P
	Atlas 163.CEL	9.607605	2e-4	P
TobEA open bud	Atlas 171.CEL	9.786909	2e-4	P
	Atlas 244.CEL	8.783389	2e-4	P
	Atlas 159.CEL	8.614193	2e-4	P
	Atlas 167.CEL	9.646322	2e-4	P
	Atlas 169.CEL	8.949735	2e-4	P
TobEA cotyledons	Atlas 69.CEL	10.091543	2e-4	P
	Atlas 71.CEL	9.932577	2e-4	P
	Atlas 75.CEL	9.618348	2e-4	P
	Atlas 70.CEL	9.349025	2e-4	P
	Atlas 74.CEL	9.591876	2e-4	P
TobEA flower	Atlas 198.CEL	10.073955	2e-4	P
	Atlas 166.CEL	9.556846	2e-4	P
	Atlas 197.CEL	9.903419	2e-4	P
	Atlas 158.CEL	9.434118	2e-4	P
	Atlas 165.CEL	9.511448	2e-4	P
TobEA lower stem	Atlas 245.CEL	10.217012	2e-4	P
	Atlas 164.CEL	9.234424	2e-4	P
	Atlas 172.CEL	9.34959	2e-4	P
	Atlas 174.CEL	9.779845	2e-4	P
	Atlas 200.CEL	10.10117	2e-4	P
TobEA upper stem	Atlas 162.CEL	8.429325	2e-4	P
	Atlas 170.CEL	9.124228	2e-4	P
	Atlas 196.CEL	9.480994	2e-4	P
	Atlas 160.CEL	8.358806	2e-4	P
	Atlas 168.CEL	9.076136	2e-4	P
TobEA cauline leaf	Atlas 237.CEL	9.163095	2e-4	P
	Atlas 229.CEL	9.209383	2e-4	P
	Atlas 231.CEL	8.83389	2e-4	P
	Atlas 235.CEL	8.656191	2e-4	P
	Atlas 233.CEL	9.054762	2e-4	P
TobEA early senescent leaf	Atlas 175.CEL	9.061196	2e-4	P
	Atlas 183.CEL	10.287496	2e-4	P
	Atlas 187.CEL	10.642599	2e-4	P
	Atlas 191.CEL	10.870643	2e-4	P
	Atlas 182.CEL	9.567584	2e-4	P
TobEA late senescent leaf	Atlas 179.CEL	10.722866	2e-4	P
	Atlas 194.CEL	10.144197	2e-4	P
	Atlas 178.CEL	9.532521	2e-4	P
	Atlas 186.CEL	9.620527	2e-4	P
	Atlas 190.CEL	10.991996	2e-4	P
TobEA mature leaf	Atlas 94.CEL	10.22671	2e-4	P
	Atlas 93.CEL	10.35495	2e-4	P
	Atlas 96.CEL	9.911737	2e-4	P
	Atlas 97.CEL	10.238566	2e-4	P
	Atlas 95.CEL	10.239459	7e-4	P
TobEA mid/early senescent leaf	Atlas 188.CEL	10.388404	2e-4	P
	Atlas 192.CEL	10.017422	2e-4	P
	Atlas 176.CEL	9.589954	2e-4	P
	Atlas 181.CEL	9.943481	2e-4	P
	Atlas 184.CEL	9.098171	2e-4	P
TobEA mid/late senescent leaf	Atlas 193.CEL	8.600415	2e-4	P
	Atlas 189.CEL	10.644601	2e-4	P
	Atlas 180.CEL	8.94209	2e-4	P
	Atlas 185.CEL	9.961258	2e-4	P
	Atlas 177.CEL	9.276046	2e-4	P
TobEA young leaf	Atlas 57.CEL	10.272812	2e-4	P
	Atlas 53.CEL	10.271306	2e-4	P
	Atlas 55.CEL	10.433711	2e-4	P
	Atlas 54.CEL	10.272895	2e-4	P
	Atlas 56.CEL	10.252889	2e-4	P
TobEA mature root	Atlas 63.CEL	10.277622	2e-4	P
	Atlas 67.CEL	10.198841	2e-4	P
	Atlas 64.CEL	10.081506	2e-4	P
	Atlas 66.CEL	10.086006	2e-4	P
	Atlas 65.CEL	10.26562	2e-4	P
TobEA young root	Atlas 39.CEL	10.644956	2e-4	P
	Atlas 43.CEL	9.738045	2e-4	P
	Atlas 40.CEL	9.686924	2e-4	P
	Atlas 41.CEL	10.478489	2e-4	P
	Atlas 44.CEL	10.131996	2e-4	P
	Atlas 42.CEL	10.268597	2e-4	P
TobEA seed	Atlas 99.CEL	11.494367	2e-4	P
	Atlas 77.CEL	11.42756	2e-4	P
	Atlas 79.CEL	11.673943	2e-4	P
	Atlas 76.CEL	11.35876	2e-4	P
	Atlas 78.CEL	11.284298	2e-4	P
	Atlas 98.CEL	11.444657	2e-4	P
TobEA young shoot	Atlas 86.CEL	9.511934	2e-4	P
	Atlas 87.CEL	9.716791	2e-4	P
	Atlas 89.CEL	9.931291	2e-4	P
	Atlas 88.CEL	9.89695	2e-4	P
	Atlas 90.CEL	10.1887	2e-4	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (13 templates correlated)

Template	Pearson	Internal Mapping
AJ717999_s_at	0.8882861	SGN-U444480
TT04_O04_at	0.8839012	SGN-U459712
EB431055_x_at	0.8838186	SGN-U449273
BP532537_at	0.8781002	SGN-U461396
EB444888_at	0.8531193	SGN-U457905
BP132883_at	0.8372834	SGN-U459758
EB679681_at	0.8271821	SGN-U464896
AJ632828_at	0.8265213	SGN-U434948
EB682240_at	0.8166287	SGN-U467079
BP192645_at	0.8146443	SGN-U463718
EB433013_at	0.8109642	SGN-U487370
DW001811_at	0.8073967	SGN-U460236
C907_at	0.8020921	SGN-U444079

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