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Expression Template: CV021441_at

Template Basic Information

Template name:	CV021441_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U464847
External db links:	GenBank: CV021441

Annotations for unigene SGN-U464847 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
CV021441_at_probe_01	PM	data not available	data not available	1
CV021441_at_probe_02	PM	data not available	data not available	1
CV021441_at_probe_03	PM	data not available	data not available	1
CV021441_at_probe_04	PM	data not available	data not available	1
CV021441_at_probe_05	PM	data not available	data not available	1
CV021441_at_probe_06	PM	data not available	data not available	1
CV021441_at_probe_07	PM	data not available	data not available	1
CV021441_at_probe_08	PM	data not available	data not available	1
CV021441_at_probe_09	PM	data not available	data not available	1
CV021441_at_probe_10	PM	data not available	data not available	1
CV021441_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	7.45	7.47	0.21	0.03
	TobEA vegetative shoot apex	shoot apex	8	8	6.49	6.60	0.68	0.10
	TobEA closed bud	flower bud	5	5	7.58	7.65	0.20	0.03
	TobEA open bud	flower bud	5	5	7.42	7.44	0.24	0.03
	TobEA cotyledons	cotyledon	5	5	5.63	5.62	0.32	0.06
	TobEA flower	flower	5	5	7.45	7.51	0.13	0.02
	TobEA lower stem	stem internode	5	5	7.21	7.31	0.21	0.03
	TobEA upper stem	stem internode	5	5	6.97	6.97	0.18	0.03
	TobEA cauline leaf	cauline leaf	5	5	7.55	7.51	0.39	0.05
	TobEA early senescent leaf	adult vascular leaf	5	5	6.79	6.83	0.30	0.04
	TobEA late senescent leaf	adult vascular leaf	5	5	7.26	7.31	0.23	0.03
	TobEA mature leaf	adult vascular leaf	5	5	7.53	7.57	0.16	0.02
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	7.04	7.17	0.23	0.03
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	6.55	6.58	0.61	0.09
	TobEA young leaf	juvenile vascular leaf	5	5	6.13	6.17	0.55	0.09
	TobEA mature root	root	5	5	6.81	6.96	0.33	0.05
	TobEA young root	root	6	6	6.24	6.26	0.19	0.03
	TobEA seed	seed	6	6	6.20	6.28	0.47	0.08
	TobEA young shoot	shoot system	5	5	5.72	5.47	0.65	0.11

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 144.CEL	7.468707	2e-4	P
	Atlas 145.CEL	7.599363	2e-4	P
	Atlas 147.CEL	7.6553755	2e-4	P
	Atlas 143.CEL	7.111758	2e-4	P
	Atlas 146.CEL	7.4233627	2e-4	P
TobEA vegetative shoot apex	Atlas 246.CEL	7.0255423	2e-4	P
	Atlas 61.CEL	6.4511504	7e-4	P
	Atlas 247.CEL	6.968647	7e-4	P
	Atlas 250.CEL	7.130744	0.001	P
	Atlas 59.CEL	5.044051	0.001	P
	Atlas 248.CEL	6.098895	0.001	P
	Atlas 249.CEL	6.7060747	7e-4	P
	Atlas 58.CEL	6.5032983	0.003	P
TobEA closed bud	Atlas 195.CEL	7.6710668	2e-4	P
	Atlas 161.CEL	7.81386	2e-4	P
	Atlas 199.CEL	7.6455646	7e-4	P
	Atlas 163.CEL	7.5174985	2e-4	P
	Atlas 173.CEL	7.272962	2e-4	P
TobEA open bud	Atlas 171.CEL	7.208196	2e-4	P
	Atlas 244.CEL	7.150207	2e-4	P
	Atlas 159.CEL	7.6758637	0.001	P
	Atlas 167.CEL	7.43735	2e-4	P
	Atlas 169.CEL	7.6495504	2e-4	P
TobEA cotyledons	Atlas 75.CEL	5.4812665	0.150	A
	Atlas 69.CEL	5.6479564	0.024	P
	Atlas 70.CEL	6.1283092	0.024	P
	Atlas 74.CEL	5.621049	0.068	A
	Atlas 71.CEL	5.249431	0.130	A
TobEA flower	Atlas 158.CEL	7.5088973	2e-4	P
	Atlas 165.CEL	7.511929	7e-4	P
	Atlas 166.CEL	7.2378783	0.001	P
	Atlas 197.CEL	7.4351196	2e-4	P
	Atlas 198.CEL	7.566484	2e-4	P
TobEA lower stem	Atlas 245.CEL	7.377687	2e-4	P
	Atlas 164.CEL	7.307656	2e-4	P
	Atlas 174.CEL	7.025432	0.002	P
	Atlas 200.CEL	6.9566216	7e-4	P
	Atlas 172.CEL	7.4037113	2e-4	P
TobEA upper stem	Atlas 196.CEL	7.021323	2e-4	P
	Atlas 160.CEL	6.9690514	2e-4	P
	Atlas 170.CEL	6.8902473	0.006	P
	Atlas 162.CEL	7.2215586	7e-4	P
	Atlas 168.CEL	6.72348	0.003	P
TobEA cauline leaf	Atlas 229.CEL	7.1736927	0.004	P
	Atlas 237.CEL	7.324673	0.001	P
	Atlas 231.CEL	7.511457	0.001	P
	Atlas 233.CEL	7.541649	0.001	P
	Atlas 235.CEL	8.200503	2e-4	P
TobEA early senescent leaf	Atlas 182.CEL	7.024602	7e-4	P
	Atlas 191.CEL	7.0041175	2e-4	P
	Atlas 175.CEL	6.274796	7e-4	P
	Atlas 183.CEL	6.811595	0.081	A
	Atlas 187.CEL	6.825736	0.046	P
TobEA late senescent leaf	Atlas 190.CEL	6.8853064	0.002	P
	Atlas 178.CEL	7.401121	2e-4	P
	Atlas 194.CEL	7.4896193	2e-4	P
	Atlas 179.CEL	7.2122264	0.024	P
	Atlas 186.CEL	7.307303	0.002	P
TobEA mature leaf	Atlas 95.CEL	7.57056	2e-4	P
	Atlas 93.CEL	7.5053825	2e-4	P
	Atlas 96.CEL	7.5828714	2e-4	P
	Atlas 97.CEL	7.7058606	2e-4	P
	Atlas 94.CEL	7.272341	2e-4	P
TobEA mid/early senescent leaf	Atlas 184.CEL	6.6967907	0.002	P
	Atlas 192.CEL	7.172315	2e-4	P
	Atlas 176.CEL	6.906493	7e-4	P
	Atlas 188.CEL	7.244867	7e-4	P
	Atlas 181.CEL	7.1811533	2e-4	P
TobEA mid/late senescent leaf	Atlas 185.CEL	6.5776944	0.046	P
	Atlas 189.CEL	6.8702054	0.022	P
	Atlas 193.CEL	7.3114715	0.001	P
	Atlas 177.CEL	5.6788063	7e-4	P
	Atlas 180.CEL	6.2984333	0.038	P
TobEA young leaf	Atlas 55.CEL	6.1740913	0.002	P
	Atlas 56.CEL	6.844017	2e-4	P
	Atlas 53.CEL	6.4625826	2e-4	P
	Atlas 54.CEL	5.5957346	0.004	P
	Atlas 57.CEL	5.58675	0.011	P
TobEA mature root	Atlas 63.CEL	6.6337314	0.008	P
	Atlas 67.CEL	6.9615703	0.001	P
	Atlas 64.CEL	7.069083	0.002	P
	Atlas 65.CEL	6.327454	0.001	P
	Atlas 66.CEL	7.074685	2e-4	P
TobEA young root	Atlas 39.CEL	5.979722	0.003	P
	Atlas 40.CEL	6.4629874	7e-4	P
	Atlas 41.CEL	6.2469473	0.001	P
	Atlas 42.CEL	6.2717304	2e-4	P
	Atlas 44.CEL	6.4163637	2e-4	P
	Atlas 43.CEL	6.080069	2e-4	P
TobEA seed	Atlas 76.CEL	6.120146	7e-4	P
	Atlas 77.CEL	6.220798	2e-4	P
	Atlas 99.CEL	6.3453894	0.005	P
	Atlas 78.CEL	6.6082563	2e-4	P
	Atlas 79.CEL	5.3178444	0.150	A
	Atlas 98.CEL	6.5829206	0.002	P
TobEA young shoot	Atlas 86.CEL	5.347041	0.056	M
	Atlas 87.CEL	6.80378	0.011	P
	Atlas 88.CEL	5.80823	0.004	P
	Atlas 90.CEL	5.4671283	7e-4	P
	Atlas 89.CEL	5.152908	0.068	A

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (1 templates correlated)

Template	Pearson	Internal Mapping
EB447948_at	0.8244569	SGN-U469616

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