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Expression Template: CV016283_at

Template Basic Information

Template name:	CV016283_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U439409
External db links:	GenBank: CV016283

Annotations for unigene SGN-U439409 (manual: 0 | blast: 2 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match	Score	E-value	Identity	Alignment Length	Frame
genbank	blastx	gi\|157329152\|emb\|CAO24578.1\|	226	2e-57	84.62	378 bp (44.5%)	2
Description:	unnamed
arabidopsis	blastx	At3G25220.1	217	6e-57	82.64	363 bp (42.8%)	2
Description:	Symbols: FKBP15-1 \| FKBP15-1 (FK506-binding protein 15 kD-1); FK506 binding / peptidyl-prolyl &hellip
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
CV016283_at_probe_01	PM	data not available	data not available	1
CV016283_at_probe_02	PM	data not available	data not available	1
CV016283_at_probe_03	PM	data not available	data not available	1
CV016283_at_probe_04	PM	data not available	data not available	1
CV016283_at_probe_05	PM	data not available	data not available	1
CV016283_at_probe_06	PM	data not available	data not available	1
CV016283_at_probe_07	PM	data not available	data not available	1
CV016283_at_probe_08	PM	data not available	data not available	1
CV016283_at_probe_09	PM	data not available	data not available	1
CV016283_at_probe_10	PM	data not available	data not available	1
CV016283_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	3.68	3.62	0.51	0.14
	TobEA vegetative shoot apex	shoot apex	8	8	3.43	3.55	1.27	0.37
	TobEA closed bud	flower bud	5	5	3.76	4.48	1.88	0.50
	TobEA open bud	flower bud	5	5	3.31	3.87	1.29	0.39
	TobEA cotyledons	cotyledon	5	5	4.65	4.34	1.06	0.23
	TobEA flower	flower	5	5	3.74	3.91	0.52	0.14
	TobEA lower stem	stem internode	5	5	3.58	3.54	0.89	0.25
	TobEA upper stem	stem internode	5	5	4.02	4.06	0.36	0.09
	TobEA cauline leaf	cauline leaf	5	5	3.74	3.93	0.65	0.17
	TobEA early senescent leaf	adult vascular leaf	5	5	4.56	4.81	1.18	0.26
	TobEA late senescent leaf	adult vascular leaf	5	5	4.09	4.46	1.43	0.35
	TobEA mature leaf	adult vascular leaf	5	5	3.99	3.84	0.53	0.13
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	3.53	4.03	1.17	0.33
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	4.21	4.19	1.02	0.24
	TobEA young leaf	juvenile vascular leaf	5	5	3.92	4.37	1.70	0.43
	TobEA mature root	root	5	5	3.45	3.53	0.87	0.25
	TobEA young root	root	6	6	3.17	3.67	1.63	0.51
	TobEA seed	seed	6	6	3.68	3.73	1.68	0.46
	TobEA young shoot	shoot system	5	5	2.81	3.53	1.81	0.64

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 143.CEL	4.4921536	0.014	P
	Atlas 147.CEL	3.6153553	0.432	A
	Atlas 144.CEL	3.74774	0.095	A
	Atlas 145.CEL	3.172566	0.366	A
	Atlas 146.CEL	3.3685226	0.399	A
TobEA vegetative shoot apex	Atlas 58.CEL	5.127705	0.056	M
	Atlas 248.CEL	3.0764787	0.195	A
	Atlas 249.CEL	1.156335	0.366	A
	Atlas 250.CEL	4.315783	0.004	P
	Atlas 59.CEL	4.372976	0.112	A
	Atlas 247.CEL	3.7322178	0.171	A
	Atlas 61.CEL	2.2680619	0.304	A
	Atlas 246.CEL	3.3710842	0.399	A
TobEA closed bud	Atlas 163.CEL	0.5989323	0.634	A
	Atlas 161.CEL	4.766325	0.150	A
	Atlas 195.CEL	4.4800105	0.195	A
	Atlas 199.CEL	3.558184	0.366	A
	Atlas 173.CEL	5.385047	0.081	A
TobEA open bud	Atlas 244.CEL	1.1670587	0.432	A
	Atlas 167.CEL	3.0877645	0.274	A
	Atlas 171.CEL	3.8726165	0.095	A
	Atlas 159.CEL	4.168397	0.219	A
	Atlas 169.CEL	4.264342	0.274	A
TobEA cotyledons	Atlas 70.CEL	4.411851	0.108	A
	Atlas 69.CEL	4.243871	0.219	A
	Atlas 71.CEL	6.4928203	0.030	P
	Atlas 74.CEL	4.3397493	0.466	A
	Atlas 75.CEL	3.7742758	0.696	A
TobEA flower	Atlas 158.CEL	3.502638	0.046	P
	Atlas 165.CEL	2.9587865	0.534	A
	Atlas 198.CEL	4.2149615	0.334	A
	Atlas 166.CEL	4.120179	0.219	A
	Atlas 197.CEL	3.913477	0.014	P
TobEA lower stem	Atlas 174.CEL	4.178088	0.195	A
	Atlas 164.CEL	4.6039224	0.195	A
	Atlas 172.CEL	3.2663715	0.056	M
	Atlas 200.CEL	2.293217	0.304	A
	Atlas 245.CEL	3.5433795	0.195	A
TobEA upper stem	Atlas 170.CEL	3.7545273	0.219	A
	Atlas 196.CEL	4.3217573	0.038	P
	Atlas 160.CEL	3.5662975	0.399	A
	Atlas 162.CEL	4.422528	0.145	A
	Atlas 168.CEL	4.056347	0.219	A
TobEA cauline leaf	Atlas 229.CEL	4.5203753	0.002	P
	Atlas 231.CEL	2.8162405	0.296	A
	Atlas 237.CEL	3.4026475	0.334	A
	Atlas 233.CEL	4.0249863	0.246	A
	Atlas 235.CEL	3.9299476	0.188	A
TobEA early senescent leaf	Atlas 175.CEL	4.807904	0.019	P
	Atlas 191.CEL	5.2664943	0.081	A
	Atlas 182.CEL	4.215886	0.267	A
	Atlas 183.CEL	2.7318537	0.601	A
	Atlas 187.CEL	5.7953835	0.195	A
TobEA late senescent leaf	Atlas 186.CEL	5.0919166	0.038	P
	Atlas 190.CEL	4.456429	0.432	A
	Atlas 178.CEL	1.6940173	0.195	A
	Atlas 194.CEL	3.9781506	0.081	A
	Atlas 179.CEL	5.239235	0.500	A
TobEA mature leaf	Atlas 94.CEL	3.844726	0.095	A
	Atlas 95.CEL	3.414384	0.366	A
	Atlas 96.CEL	4.8103447	0.112	A
	Atlas 93.CEL	4.160694	0.130	A
	Atlas 97.CEL	3.705111	0.304	A
TobEA mid/early senescent leaf	Atlas 176.CEL	4.0847964	0.081	A
	Atlas 181.CEL	3.719144	0.666	A
	Atlas 184.CEL	1.4772835	0.634	A
	Atlas 188.CEL	4.3243065	0.366	A
	Atlas 192.CEL	4.0251317	0.171	A
TobEA mid/late senescent leaf	Atlas 180.CEL	3.3801804	0.568	A
	Atlas 185.CEL	5.086173	0.304	A
	Atlas 177.CEL	5.3667817	0.046	P
	Atlas 189.CEL	3.025698	0.719	A
	Atlas 193.CEL	4.186455	0.044	P
TobEA young leaf	Atlas 54.CEL	4.142469	0.030	P
	Atlas 55.CEL	4.373445	0.171	A
	Atlas 56.CEL	1.0142032	0.696	A
	Atlas 53.CEL	5.4769273	0.004	P
	Atlas 57.CEL	4.5978594	0.095	A
TobEA mature root	Atlas 64.CEL	4.470389	0.274	A
	Atlas 66.CEL	2.2085655	0.297	A
	Atlas 67.CEL	3.5314562	0.366	A
	Atlas 63.CEL	3.0754237	0.334	A
	Atlas 65.CEL	3.9792259	0.246	A
TobEA young root	Atlas 40.CEL	0.5281808	0.568	A
	Atlas 43.CEL	3.4689498	0.150	A
	Atlas 39.CEL	4.219194	0.304	A
	Atlas 41.CEL	4.934104	0.011	P
	Atlas 42.CEL	3.8788283	0.534	A
	Atlas 44.CEL	1.9771281	0.399	A
TobEA seed	Atlas 78.CEL	5.3185215	0.095	A
	Atlas 76.CEL	3.0470383	0.534	A
	Atlas 79.CEL	5.5642853	0.019	P
	Atlas 99.CEL	4.412741	0.246	A
	Atlas 77.CEL	2.3496742	0.432	A
	Atlas 98.CEL	1.3981961	0.696	A
TobEA young shoot	Atlas 86.CEL	3.5304747	0.366	A
	Atlas 87.CEL		0.626	A
	Atlas 88.CEL	2.127928	0.500	A
	Atlas 89.CEL	4.5730453	0.095	A
	Atlas 90.CEL	3.8417873	0.219	A

Correlation analysis (0)

No correlation analysis was found associated to this template

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