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Expression Template: BP532537_at

Template Basic Information

Template name:	BP532537_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U461396
External db links:	GenBank: BP532537

Annotations for unigene SGN-U461396 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
BP532537_at_probe_01	PM	data not available	data not available	1
BP532537_at_probe_02	PM	data not available	data not available	1
BP532537_at_probe_03	PM	data not available	data not available	1
BP532537_at_probe_04	PM	data not available	data not available	1
BP532537_at_probe_05	PM	data not available	data not available	1
BP532537_at_probe_06	PM	data not available	data not available	1
BP532537_at_probe_07	PM	data not available	data not available	1
BP532537_at_probe_08	PM	data not available	data not available	1
BP532537_at_probe_09	PM	data not available	data not available	1
BP532537_at_probe_10	PM	data not available	data not available	1
BP532537_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	9.92	9.92	0.07	0.01
	TobEA vegetative shoot apex	shoot apex	8	8	9.61	10.01	0.86	0.09
	TobEA closed bud	flower bud	5	5	9.29	9.23	0.35	0.04
	TobEA open bud	flower bud	5	5	9.13	9.04	0.51	0.06
	TobEA cotyledons	cotyledon	5	5	8.89	8.92	0.35	0.04
	TobEA flower	flower	5	5	9.12	9.09	0.48	0.05
	TobEA lower stem	stem internode	5	5	9.18	9.11	0.70	0.08
	TobEA upper stem	stem internode	5	5	8.44	8.73	0.65	0.08
	TobEA cauline leaf	cauline leaf	5	5	7.74	7.81	0.14	0.02
	TobEA early senescent leaf	adult vascular leaf	5	5	9.12	9.55	1.10	0.12
	TobEA late senescent leaf	adult vascular leaf	5	5	9.29	9.29	0.61	0.07
	TobEA mature leaf	adult vascular leaf	5	5	9.11	9.16	0.16	0.02
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	8.76	8.88	0.78	0.09
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	8.53	8.15	1.36	0.16
	TobEA young leaf	juvenile vascular leaf	5	5	9.72	9.77	0.15	0.02
	TobEA mature root	root	5	5	9.50	9.50	0.06	0.01
	TobEA young root	root	6	6	9.31	9.29	0.61	0.07
	TobEA seed	seed	6	6	10.74	10.74	0.20	0.02
	TobEA young shoot	shoot system	5	5	9.23	9.18	0.34	0.04

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 143.CEL	9.939907	2e-4	P
	Atlas 144.CEL	10.001517	7e-4	P
	Atlas 145.CEL	9.814651	2e-4	P
	Atlas 147.CEL	9.904678	2e-4	P
	Atlas 146.CEL	9.915189	2e-4	P
TobEA vegetative shoot apex	Atlas 248.CEL	9.929938	7e-4	P
	Atlas 246.CEL	10.098976	2e-4	P
	Atlas 247.CEL	10.241963	7e-4	P
	Atlas 61.CEL	8.993138	2e-4	P
	Atlas 249.CEL	10.244178	2e-4	P
	Atlas 250.CEL	10.455821	2e-4	P
	Atlas 58.CEL	8.716103	2e-4	P
	Atlas 59.CEL	8.162636	2e-4	P
TobEA closed bud	Atlas 163.CEL	9.197113	7e-4	P
	Atlas 173.CEL	9.227771	7e-4	P
	Atlas 199.CEL	9.777239	7e-4	P
	Atlas 161.CEL	8.816117	2e-4	P
	Atlas 195.CEL	9.431635	2e-4	P
TobEA open bud	Atlas 159.CEL	8.609883	7e-4	P
	Atlas 169.CEL	9.035506	2e-4	P
	Atlas 171.CEL	9.616507	2e-4	P
	Atlas 244.CEL	8.683702	7e-4	P
	Atlas 167.CEL	9.717179	2e-4	P
TobEA cotyledons	Atlas 69.CEL	9.285243	7e-4	P
	Atlas 71.CEL	8.845742	2e-4	P
	Atlas 74.CEL	8.919374	7e-4	P
	Atlas 70.CEL	8.349308	7e-4	P
	Atlas 75.CEL	9.053216	0.001	P
TobEA flower	Atlas 158.CEL	8.722446	2e-4	P
	Atlas 166.CEL	9.093625	2e-4	P
	Atlas 197.CEL	9.450026	2e-4	P
	Atlas 198.CEL	9.725683	7e-4	P
	Atlas 165.CEL	8.58695	2e-4	P
TobEA lower stem	Atlas 245.CEL	10.182436	2e-4	P
	Atlas 172.CEL	8.756798	7e-4	P
	Atlas 164.CEL	8.353143	2e-4	P
	Atlas 174.CEL	9.112256	2e-4	P
	Atlas 200.CEL	9.491843	2e-4	P
TobEA upper stem	Atlas 160.CEL	8.301864	0.002	P
	Atlas 170.CEL	8.789875	2e-4	P
	Atlas 196.CEL	9.001652	2e-4	P
	Atlas 162.CEL	7.370317	2e-4	P
	Atlas 168.CEL	8.734461	7e-4	P
TobEA cauline leaf	Atlas 231.CEL	7.838576	2e-4	P
	Atlas 235.CEL	7.509297	0.002	P
	Atlas 237.CEL	7.7019057	2e-4	P
	Atlas 229.CEL	7.858257	2e-4	P
	Atlas 233.CEL	7.8136277	7e-4	P
TobEA early senescent leaf	Atlas 175.CEL	7.580073	2e-4	P
	Atlas 182.CEL	8.372248	2e-4	P
	Atlas 191.CEL	10.027516	2e-4	P
	Atlas 183.CEL	9.5500765	2e-4	P
	Atlas 187.CEL	10.054832	2e-4	P
TobEA late senescent leaf	Atlas 179.CEL	9.832093	2e-4	P
	Atlas 186.CEL	9.036354	2e-4	P
	Atlas 178.CEL	8.41747	2e-4	P
	Atlas 190.CEL	9.898494	2e-4	P
	Atlas 194.CEL	9.2864485	2e-4	P
TobEA mature leaf	Atlas 93.CEL	9.301977	2e-4	P
	Atlas 95.CEL	9.027922	2e-4	P
	Atlas 94.CEL	9.163193	2e-4	P
	Atlas 97.CEL	9.191502	2e-4	P
	Atlas 96.CEL	8.8902645	2e-4	P
TobEA mid/early senescent leaf	Atlas 176.CEL	8.150316	2e-4	P
	Atlas 192.CEL	8.881578	2e-4	P
	Atlas 184.CEL	7.861928	7e-4	P
	Atlas 188.CEL	9.810933	2e-4	P
	Atlas 181.CEL	9.104803	2e-4	P
TobEA mid/late senescent leaf	Atlas 185.CEL	9.867265	2e-4	P
	Atlas 189.CEL	10.048474	2e-4	P
	Atlas 177.CEL	7.5419903	0.002	P
	Atlas 180.CEL	8.15381	2e-4	P
	Atlas 193.CEL	7.0595217	2e-4	P
TobEA young leaf	Atlas 53.CEL	9.714424	7e-4	P
	Atlas 55.CEL	9.794515	2e-4	P
	Atlas 56.CEL	9.860587	7e-4	P
	Atlas 57.CEL	9.769546	2e-4	P
	Atlas 54.CEL	9.46502	2e-4	P
TobEA mature root	Atlas 65.CEL	9.502183	7e-4	P
	Atlas 64.CEL	9.485877	7e-4	P
	Atlas 67.CEL	9.396175	7e-4	P
	Atlas 63.CEL	9.549095	2e-4	P
	Atlas 66.CEL	9.550897	7e-4	P
TobEA young root	Atlas 41.CEL	9.843232	7e-4	P
	Atlas 43.CEL	8.299114	7e-4	P
	Atlas 39.CEL	10.007869	2e-4	P
	Atlas 40.CEL	9.109305	7e-4	P
	Atlas 42.CEL	9.237196	2e-4	P
	Atlas 44.CEL	9.350202	2e-4	P
TobEA seed	Atlas 77.CEL	10.728327	7e-4	P
	Atlas 78.CEL	10.705921	7e-4	P
	Atlas 76.CEL	10.41323	7e-4	P
	Atlas 79.CEL	11.050913	2e-4	P
	Atlas 98.CEL	10.749498	2e-4	P
	Atlas 99.CEL	10.764498	2e-4	P
TobEA young shoot	Atlas 90.CEL	9.695769	7e-4	P
	Atlas 86.CEL	8.875839	0.002	P
	Atlas 88.CEL	8.96558	2e-4	P
	Atlas 89.CEL	9.450118	7e-4	P
	Atlas 87.CEL	9.175304	7e-4	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (22 templates correlated)

Template	Pearson	Internal Mapping
AJ717999_s_at	0.9631507	SGN-U444480
EB431055_x_at	0.9399128	SGN-U449273
TT04_O04_at	0.9195323	SGN-U459712
DV159657_s_at	0.9113498	SGN-U449273
EB433013_at	0.8802342	SGN-U487370
DW001811_at	0.8781483	SGN-U460236
DV159907_at	0.8781002	SGN-U461378
DV158099_at	0.869377	SGN-U449445
AJ632828_at	0.860804	SGN-U434948
C8052_x_at	0.8579142	SGN-U448429
BP192645_at	0.841076	SGN-U463718
DV999343_x_at	0.839402	SGN-U448771
EB444888_at	0.8373955	SGN-U457905
C9014_x_at	0.8321153	SGN-U446978
MC305A_at	0.82999	No available
EB677497_at	0.8283474	SGN-U449544
C1090_at	0.8160243	SGN-U444817
BP533269_at	0.8107483	SGN-U467321
GC207_x_at	0.8063008	No available
C9347_at	0.806204	SGN-U434093
GC207_at	0.8046385	No available
C667_at	0.8033363	SGN-U439970

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