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Expression Template: BP531390_at

Template Basic Information

Template name:	BP531390_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U465475
External db links:	GenBank: BP531390

Annotations for unigene SGN-U465475 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
BP531390_at_probe_01	PM	data not available	data not available	1
BP531390_at_probe_02	PM	data not available	data not available	1
BP531390_at_probe_03	PM	data not available	data not available	1
BP531390_at_probe_04	PM	data not available	data not available	1
BP531390_at_probe_05	PM	data not available	data not available	1
BP531390_at_probe_06	PM	data not available	data not available	1
BP531390_at_probe_07	PM	data not available	data not available	1
BP531390_at_probe_08	PM	data not available	data not available	1
BP531390_at_probe_09	PM	data not available	data not available	1
BP531390_at_probe_10	PM	data not available	data not available	1
BP531390_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	8.98	8.96	0.11	0.01
	TobEA vegetative shoot apex	shoot apex	8	8	8.94	8.95	0.05	0.01
	TobEA closed bud	flower bud	5	5	8.46	8.51	0.12	0.01
	TobEA open bud	flower bud	5	5	8.38	8.34	0.15	0.02
	TobEA cotyledons	cotyledon	5	5	7.97	8.09	0.54	0.07
	TobEA flower	flower	5	5	8.18	8.16	0.09	0.01
	TobEA lower stem	stem internode	5	5	8.31	8.36	0.16	0.02
	TobEA upper stem	stem internode	5	5	8.06	7.89	0.37	0.05
	TobEA cauline leaf	cauline leaf	5	5	8.48	8.51	0.18	0.02
	TobEA early senescent leaf	adult vascular leaf	5	5	8.33	8.21	0.35	0.04
	TobEA late senescent leaf	adult vascular leaf	5	5	8.62	8.64	0.18	0.02
	TobEA mature leaf	adult vascular leaf	5	5	8.88	8.84	0.12	0.01
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	8.52	8.71	0.36	0.04
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	8.65	8.60	0.37	0.04
	TobEA young leaf	juvenile vascular leaf	5	5	8.54	8.57	0.21	0.02
	TobEA mature root	root	5	5	8.45	8.44	0.13	0.01
	TobEA young root	root	6	6	8.12	7.98	0.36	0.04
	TobEA seed	seed	6	6	9.33	9.35	0.07	0.01
	TobEA young shoot	shoot system	5	5	7.87	7.83	0.19	0.02

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 145.CEL	8.961931	2e-4	P
	Atlas 144.CEL	8.856924	7e-4	P
	Atlas 146.CEL	8.992635	2e-4	P
	Atlas 147.CEL	8.946244	2e-4	P
	Atlas 143.CEL	9.153265	2e-4	P
TobEA vegetative shoot apex	Atlas 246.CEL	8.932471	2e-4	P
	Atlas 247.CEL	8.911764	2e-4	P
	Atlas 250.CEL	9.005077	2e-4	P
	Atlas 58.CEL	8.955957	2e-4	P
	Atlas 249.CEL	8.942508	2e-4	P
	Atlas 59.CEL	8.969223	2e-4	P
	Atlas 61.CEL	8.830125	2e-4	P
	Atlas 248.CEL	8.963592	2e-4	P
TobEA closed bud	Atlas 173.CEL	8.556153	2e-4	P
	Atlas 199.CEL	8.408088	2e-4	P
	Atlas 161.CEL	8.28728	7e-4	P
	Atlas 163.CEL	8.565111	2e-4	P
	Atlas 195.CEL	8.506455	7e-4	P
TobEA open bud	Atlas 169.CEL	8.204841	2e-4	P
	Atlas 159.CEL	8.533183	2e-4	P
	Atlas 167.CEL	8.343159	2e-4	P
	Atlas 171.CEL	8.280348	2e-4	P
	Atlas 244.CEL	8.553383	2e-4	P
TobEA cotyledons	Atlas 69.CEL	8.719297	2e-4	P
	Atlas 75.CEL	7.513076	2e-4	P
	Atlas 70.CEL	8.089663	2e-4	P
	Atlas 71.CEL	8.131325	2e-4	P
	Atlas 74.CEL	7.383037	0.002	P
TobEA flower	Atlas 158.CEL	8.125876	2e-4	P
	Atlas 165.CEL	8.190461	2e-4	P
	Atlas 166.CEL	8.09881	2e-4	P
	Atlas 197.CEL	8.160565	2e-4	P
	Atlas 198.CEL	8.3363495	2e-4	P
TobEA lower stem	Atlas 174.CEL	8.053451	2e-4	P
	Atlas 200.CEL	8.267598	7e-4	P
	Atlas 164.CEL	8.361985	2e-4	P
	Atlas 172.CEL	8.470802	2e-4	P
	Atlas 245.CEL	8.393066	7e-4	P
TobEA upper stem	Atlas 162.CEL	7.8895025	7e-4	P
	Atlas 170.CEL	7.83971	2e-4	P
	Atlas 160.CEL	8.512196	7e-4	P
	Atlas 168.CEL	7.6674666	7e-4	P
	Atlas 196.CEL	8.394502	2e-4	P
TobEA cauline leaf	Atlas 233.CEL	8.328647	2e-4	P
	Atlas 229.CEL	8.711853	2e-4	P
	Atlas 235.CEL	8.260885	2e-4	P
	Atlas 237.CEL	8.510095	7e-4	P
	Atlas 231.CEL	8.572656	7e-4	P
TobEA early senescent leaf	Atlas 182.CEL	8.909655	2e-4	P
	Atlas 183.CEL	7.9769425	2e-4	P
	Atlas 175.CEL	8.3633375	2e-4	P
	Atlas 187.CEL	8.185195	0.001	P
	Atlas 191.CEL	8.21414	2e-4	P
TobEA late senescent leaf	Atlas 178.CEL	8.557029	2e-4	P
	Atlas 179.CEL	8.774866	2e-4	P
	Atlas 186.CEL	8.352357	2e-4	P
	Atlas 190.CEL	8.793656	2e-4	P
	Atlas 194.CEL	8.644299	2e-4	P
TobEA mature leaf	Atlas 93.CEL	8.844199	2e-4	P
	Atlas 94.CEL	8.923676	2e-4	P
	Atlas 95.CEL	8.833712	7e-4	P
	Atlas 96.CEL	8.732013	2e-4	P
	Atlas 97.CEL	9.048377	2e-4	P
TobEA mid/early senescent leaf	Atlas 188.CEL	8.106799	7e-4	P
	Atlas 176.CEL	8.714629	2e-4	P
	Atlas 181.CEL	8.154683	2e-4	P
	Atlas 184.CEL	8.722168	7e-4	P
	Atlas 192.CEL	8.892259	2e-4	P
TobEA mid/late senescent leaf	Atlas 177.CEL	9.16627	2e-4	P
	Atlas 185.CEL	8.174743	7e-4	P
	Atlas 189.CEL	8.482188	7e-4	P
	Atlas 193.CEL	8.810253	2e-4	P
	Atlas 180.CEL	8.595122	2e-4	P
TobEA young leaf	Atlas 54.CEL	8.574423	2e-4	P
	Atlas 55.CEL	8.481662	2e-4	P
	Atlas 56.CEL	8.229151	2e-4	P
	Atlas 53.CEL	8.670126	2e-4	P
	Atlas 57.CEL	8.764704	2e-4	P
TobEA mature root	Atlas 64.CEL	8.657314	2e-4	P
	Atlas 65.CEL	8.449697	2e-4	P
	Atlas 63.CEL	8.436609	2e-4	P
	Atlas 66.CEL	8.385323	2e-4	P
	Atlas 67.CEL	8.323905	2e-4	P
TobEA young root	Atlas 39.CEL	8.740181	7e-4	P
	Atlas 42.CEL	7.854284	2e-4	P
	Atlas 43.CEL	7.8444605	7e-4	P
	Atlas 44.CEL	8.103975	7e-4	P
	Atlas 40.CEL	7.836421	7e-4	P
	Atlas 41.CEL	8.327761	7e-4	P
TobEA seed	Atlas 79.CEL	9.200189	7e-4	P
	Atlas 76.CEL	9.317767	2e-4	P
	Atlas 98.CEL	9.329974	2e-4	P
	Atlas 99.CEL	9.370462	7e-4	P
	Atlas 77.CEL	9.366033	2e-4	P
	Atlas 78.CEL	9.401108	2e-4	P
TobEA young shoot	Atlas 89.CEL	7.7572184	2e-4	P
	Atlas 86.CEL	7.997192	2e-4	P
	Atlas 87.CEL	8.123736	2e-4	P
	Atlas 88.CEL	7.647127	7e-4	P
	Atlas 90.CEL	7.8325605	2e-4	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (9 templates correlated)

Template	Pearson	Internal Mapping
C4625_at	0.8569318	SGN-U456704
TT10_G02_at	0.819035	SGN-U460014
BP530315_at	0.8178778	SGN-U449451
BP532114_at	0.8141793	SGN-U434707
C1838_at	0.812049	SGN-U423334
EB678294_at	0.8079298	SGN-U438148
EB424650_at	0.8067199	SGN-U462696
C11122_at	0.8056224	No available
C1244_at	0.8002433	SGN-U441767

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