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Expression Template: BP530514_at

Template Basic Information

Template name:	BP530514_at
Template type:	Probe Set
Platform:	Affymetrix TobEA
Internal db links:	SGN-U500717
External db links:	GenBank: BP530514

Annotations for unigene SGN-U500717 (manual: 0 | blast: 0 | go: 0 )

Manual annotations

None manual annotation was found for this unigene

Blast Annotations [Show All]

Database	Program	Best Match
genbank	blastx	No significant hits (or none blast was used over this dataset)
arabidopsis	blastx	No significant hits (or none blast was used over this dataset)
swissprot	blastx	No significant hits (or none blast was used over this dataset)

GO Terms Annotations

No Gene Ontology annotation

Probe Composition (11)

Probe name	Probe type	Template start coord	Template end coord	Spots
BP530514_at_probe_01	PM	data not available	data not available	1
BP530514_at_probe_02	PM	data not available	data not available	1
BP530514_at_probe_03	PM	data not available	data not available	1
BP530514_at_probe_04	PM	data not available	data not available	1
BP530514_at_probe_05	PM	data not available	data not available	1
BP530514_at_probe_06	PM	data not available	data not available	1
BP530514_at_probe_07	PM	data not available	data not available	1
BP530514_at_probe_08	PM	data not available	data not available	1
BP530514_at_probe_09	PM	data not available	data not available	1
BP530514_at_probe_10	PM	data not available	data not available	1
BP530514_at_probe_11	PM	data not available	data not available	1

Graph: Expression Data by Experiment

Table: Expression Data by Experiment (19)

Experimental design name	Experiment name	Tissue	Experiment replicates	Replicates pValue<0.05	Mean	Median	SD	CV
TobEA	TobEA floral shoot apex	shoot apex	5	5	9.58	9.54	0.11	0.01
	TobEA vegetative shoot apex	shoot apex	8	8	9.44	9.40	0.18	0.02
	TobEA closed bud	flower bud	5	5	9.36	9.42	0.15	0.02
	TobEA open bud	flower bud	5	5	9.06	9.06	0.07	0.01
	TobEA cotyledons	cotyledon	5	5	8.47	8.42	0.16	0.02
	TobEA flower	flower	5	5	9.09	9.06	0.16	0.02
	TobEA lower stem	stem internode	5	5	9.48	9.45	0.09	0.01
	TobEA upper stem	stem internode	5	5	9.13	9.19	0.19	0.02
	TobEA cauline leaf	cauline leaf	5	5	9.07	9.06	0.15	0.02
	TobEA early senescent leaf	adult vascular leaf	5	5	9.63	9.58	0.18	0.02
	TobEA late senescent leaf	adult vascular leaf	5	5	9.44	9.54	0.21	0.02
	TobEA mature leaf	adult vascular leaf	5	5	9.31	9.27	0.12	0.01
	TobEA mid/early senescent leaf	adult vascular leaf	5	5	9.56	9.55	0.15	0.02
	TobEA mid/late senescent leaf	adult vascular leaf	5	5	9.24	9.26	0.21	0.02
	TobEA young leaf	juvenile vascular leaf	5	5	9.02	9.00	0.06	0.01
	TobEA mature root	root	5	5	9.52	9.51	0.15	0.02
	TobEA young root	root	6	6	9.38	9.37	0.20	0.02
	TobEA seed	seed	6	6	9.51	9.52	0.10	0.01
	TobEA young shoot	shoot system	5	5	8.53	8.51	0.08	0.01

Expression Data by Targets (experiment replicates) (100)

Experiment name	Target name	normalized_signal	pVal_call	flag
TobEA floral shoot apex	Atlas 145.CEL	9.478647	2e-4	P
	Atlas 144.CEL	9.624404	2e-4	P
	Atlas 143.CEL	9.760315	2e-4	P
	Atlas 146.CEL	9.540154	2e-4	P
	Atlas 147.CEL	9.503084	2e-4	P
TobEA vegetative shoot apex	Atlas 246.CEL	9.479423	2e-4	P
	Atlas 248.CEL	9.328726	2e-4	P
	Atlas 249.CEL	9.31479	2e-4	P
	Atlas 61.CEL	9.544312	2e-4	P
	Atlas 250.CEL	9.202522	2e-4	P
	Atlas 59.CEL	9.661446	2e-4	P
	Atlas 247.CEL	9.319325	2e-4	P
	Atlas 58.CEL	9.7073145	2e-4	P
TobEA closed bud	Atlas 163.CEL	9.480262	2e-4	P
	Atlas 195.CEL	9.469063	2e-4	P
	Atlas 199.CEL	9.122534	2e-4	P
	Atlas 161.CEL	9.326761	2e-4	P
	Atlas 173.CEL	9.423688	2e-4	P
TobEA open bud	Atlas 159.CEL	9.061219	2e-4	P
	Atlas 167.CEL	9.030105	2e-4	P
	Atlas 171.CEL	8.959239	2e-4	P
	Atlas 244.CEL	9.089966	2e-4	P
	Atlas 169.CEL	9.140901	2e-4	P
TobEA cotyledons	Atlas 71.CEL	8.634815	2e-4	P
	Atlas 69.CEL	8.660482	2e-4	P
	Atlas 70.CEL	8.415301	2e-4	P
	Atlas 74.CEL	8.33567	2e-4	P
	Atlas 75.CEL	8.323375	2e-4	P
TobEA flower	Atlas 197.CEL	9.018317	2e-4	P
	Atlas 198.CEL	8.938793	2e-4	P
	Atlas 158.CEL	9.077291	2e-4	P
	Atlas 165.CEL	9.05624	2e-4	P
	Atlas 166.CEL	9.364832	2e-4	P
TobEA lower stem	Atlas 200.CEL	9.38975	2e-4	P
	Atlas 174.CEL	9.481792	2e-4	P
	Atlas 245.CEL	9.450748	2e-4	P
	Atlas 164.CEL	9.450331	2e-4	P
	Atlas 172.CEL	9.635437	2e-4	P
TobEA upper stem	Atlas 162.CEL	9.309578	2e-4	P
	Atlas 170.CEL	9.190923	2e-4	P
	Atlas 196.CEL	8.849688	2e-4	P
	Atlas 160.CEL	9.031885	2e-4	P
	Atlas 168.CEL	9.253384	2e-4	P
TobEA cauline leaf	Atlas 235.CEL	8.8979	2e-4	P
	Atlas 237.CEL	9.208252	2e-4	P
	Atlas 229.CEL	9.224054	2e-4	P
	Atlas 231.CEL	8.9436245	2e-4	P
	Atlas 233.CEL	9.063067	2e-4	P
TobEA early senescent leaf	Atlas 175.CEL	9.5564995	2e-4	P
	Atlas 187.CEL	9.90708	2e-4	P
	Atlas 191.CEL	9.681377	2e-4	P
	Atlas 182.CEL	9.584382	2e-4	P
	Atlas 183.CEL	9.423618	2e-4	P
TobEA late senescent leaf	Atlas 178.CEL	9.292654	2e-4	P
	Atlas 194.CEL	9.158422	2e-4	P
	Atlas 179.CEL	9.647796	2e-4	P
	Atlas 186.CEL	9.540079	2e-4	P
	Atlas 190.CEL	9.57472	2e-4	P
TobEA mature leaf	Atlas 94.CEL	9.267638	2e-4	P
	Atlas 93.CEL	9.149125	2e-4	P
	Atlas 96.CEL	9.256098	2e-4	P
	Atlas 97.CEL	9.414484	2e-4	P
	Atlas 95.CEL	9.443876	2e-4	P
TobEA mid/early senescent leaf	Atlas 181.CEL	9.364923	2e-4	P
	Atlas 184.CEL	9.533847	2e-4	P
	Atlas 188.CEL	9.771267	7e-4	P
	Atlas 176.CEL	9.602152	2e-4	P
	Atlas 192.CEL	9.550679	2e-4	P
TobEA mid/late senescent leaf	Atlas 180.CEL	9.259061	2e-4	P
	Atlas 185.CEL	9.113948	7e-4	P
	Atlas 189.CEL	8.986959	2e-4	P
	Atlas 193.CEL	9.255591	2e-4	P
	Atlas 177.CEL	9.562586	2e-4	P
TobEA young leaf	Atlas 56.CEL	8.970177	2e-4	P
	Atlas 55.CEL	8.969261	2e-4	P
	Atlas 53.CEL	9.099002	2e-4	P
	Atlas 54.CEL	8.998708	2e-4	P
	Atlas 57.CEL	9.059941	2e-4	P
TobEA mature root	Atlas 66.CEL	9.343924	2e-4	P
	Atlas 65.CEL	9.5837965	2e-4	P
	Atlas 63.CEL	9.736032	2e-4	P
	Atlas 64.CEL	9.400474	2e-4	P
	Atlas 67.CEL	9.511909	2e-4	P
TobEA young root	Atlas 41.CEL	9.429771	2e-4	P
	Atlas 43.CEL	9.119692	2e-4	P
	Atlas 39.CEL	9.716318	2e-4	P
	Atlas 44.CEL	9.260729	2e-4	P
	Atlas 40.CEL	9.448989	2e-4	P
	Atlas 42.CEL	9.309401	2e-4	P
TobEA seed	Atlas 77.CEL	9.354131	2e-4	P
	Atlas 98.CEL	9.609952	2e-4	P
	Atlas 78.CEL	9.51995	2e-4	P
	Atlas 76.CEL	9.451379	2e-4	P
	Atlas 79.CEL	9.528556	2e-4	P
	Atlas 99.CEL	9.605548	7e-4	P
TobEA young shoot	Atlas 87.CEL	8.541416	2e-4	P
	Atlas 88.CEL	8.432929	2e-4	P
	Atlas 90.CEL	8.647929	2e-4	P
	Atlas 86.CEL	8.50964	7e-4	P
	Atlas 89.CEL	8.500493	2e-4	P

Correlation analysis (1)

Correlation Analisis ID:	1
Methodology:	Pearson Correlation Analysis
Description:	This correlation analysis was made using R software and loaded into the SGN database with a cutoff value of 0.8

Correlation Type:

Possitive correlations (4 templates correlated)

Template	Pearson	Internal Mapping
EB444226_at	0.8412606	SGN-U442238
C8521_at	0.8226021	SGN-U424509
C11501_at	0.8134328	SGN-U423132
EB444726_at	0.8043655	SGN-U435531

Correlation Type:

Negative correlations (2 templates correlated)

Template	Pearson	Internal Mapping
C6578_at	-0.830475	SGN-U443218
TT07_G13_at	-0.8155473	SGN-U443218

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