| genbank/nr [blastx] | Showing best 20 hits recorded |
| Match: gi|147771519|emb|CAN66750.1| |
score: 93.6 |
e-value: 5e-27 |
Identity: 76.36% |
Span: 165bp (20.7%) |
Frame: -1 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|270252309|emb|CBI18920.1| |
score: 93.6 |
e-value: 9e-27 |
Identity: 76.36% |
Span: 165bp (20.7%) |
Frame: -1 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|242097088|ref|XP_002439034.1| |
score: 88.2 |
e-value: 6e-21 |
Identity: 69.09% |
Span: 165bp (20.7%) |
Frame: -1 |
| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor] >gi241917257|gb|EER90401.1| hypothetical protein SORBIDRA... |
| Match: gi|115469990|ref|NP_001058594.1| |
score: 87.4 |
e-value: 5e-20 |
Identity: 70.91% |
Span: 165bp (20.7%) |
Frame: -1 |
| Os06g0717400 [Oryza sativa (japonica cultivar-group)] >gi75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA pseudourin... |
| Match: gi|218198893|gb|EEC81320.1| |
score: 87.4 |
e-value: 5e-20 |
Identity: 70.91% |
Span: 165bp (20.7%) |
Frame: -1 |
| hypothetical protein OsI_24484 [Oryza sativa Indica Group] |
| Match: gi|226491450|ref|NP_001140404.1| |
score: 84.7 |
e-value: 1e-14 |
Identity: 65.45% |
Span: 165bp (20.7%) |
Frame: -1 |
| hypothetical protein LOC100272459 [Zea mays] >gi194699356|gb|ACF83762.1| unknown [Zea mays] |
| Match: gi|195644818|gb|ACG41877.1| |
score: 84.7 |
e-value: 2e-19 |
Identity: 65.45% |
Span: 165bp (20.7%) |
Frame: -1 |
| RNA binding protein [Zea mays] |
| Match: gi|255556673|ref|XP_002519370.1| |
score: 84 |
e-value: 2e-14 |
Identity: 67.27% |
Span: 165bp (20.7%) |
Frame: -1 |
| ribosomal pseudouridine synthase, putative [Ricinus communis] >gi223541437|gb|EEF42987.1| ribosomal pseudouridine syn... |
| Match: gi|224065743|ref|XP_002301949.1| |
score: 80.9 |
e-value: 5e-23 |
Identity: 66.67% |
Span: 171bp (21.5%) |
Frame: -1 |
| predicted protein [Populus trichocarpa] >gi222843675|gb|EEE81222.1| predicted protein [Populus trichocarpa] |
| Match: gi|6721111|gb|AAF26765.1|AC007396_14 |
score: 75.9 |
e-value: 2e-16 |
Identity: 59.65% |
Span: 171bp (21.5%) |
Frame: -1 |
| T4O12.25 [Arabidopsis thaliana] |
| Match: gi|42572121|ref|NP_974151.1| |
score: 75.9 |
e-value: 2e-16 |
Identity: 59.65% |
Span: 171bp (21.5%) |
Frame: -1 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA ps... |
| Match: gi|147771519|emb|CAN66750.1| |
score: 51.2 |
e-value: 5e-27 |
Identity: 65.79% |
Span: 114bp (14.3%) |
Frame: -3 |
| hypothetical protein [Vitis vinifera] |
| Match: gi|224065743|ref|XP_002301949.1| |
score: 50.4 |
e-value: 5e-23 |
Identity: 61.11% |
Span: 108bp (13.6%) |
Frame: -3 |
| predicted protein [Populus trichocarpa] >gi222843675|gb|EEE81222.1| predicted protein [Populus trichocarpa] |
| Match: gi|270252309|emb|CBI18920.1| |
score: 50.4 |
e-value: 9e-27 |
Identity: 67.65% |
Span: 102bp (12.8%) |
Frame: -3 |
| unnamed protein product [Vitis vinifera] |
| Match: gi|242097088|ref|XP_002439034.1| |
score: 36.2 |
e-value: 6e-21 |
Identity: 40.62% |
Span: 96bp (12.0%) |
Frame: -3 |
| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor] >gi241917257|gb|EER90401.1| hypothetical protein SORBIDRA... |
| Match: gi|195644818|gb|ACG41877.1| |
score: 34.7 |
e-value: 2e-19 |
Identity: 40.62% |
Span: 96bp (12.0%) |
Frame: -3 |
| RNA binding protein [Zea mays] |
| Match: gi|115469990|ref|NP_001058594.1| |
score: 33.9 |
e-value: 5e-20 |
Identity: 40% |
Span: 90bp (11.3%) |
Frame: -3 |
| Os06g0717400 [Oryza sativa (japonica cultivar-group)] >gi75252835|sp|Q5Z8P2.1|PUS2_ORYSJ RecName: Full=RNA pseudourin... |
| Match: gi|218198893|gb|EEC81320.1| |
score: 33.9 |
e-value: 5e-20 |
Identity: 40% |
Span: 90bp (11.3%) |
Frame: -3 |
| hypothetical protein OsI_24484 [Oryza sativa Indica Group] |
| Match: gi|6721111|gb|AAF26765.1|AC007396_14 |
score: 33.1 |
e-value: 2e-16 |
Identity: 46.88% |
Span: 96bp (12.0%) |
Frame: -3 |
| T4O12.25 [Arabidopsis thaliana] |
| Match: gi|42572121|ref|NP_974151.1| |
score: 33.1 |
e-value: 2e-16 |
Identity: 46.88% |
Span: 96bp (12.0%) |
Frame: -3 |
| pseudouridine synthase family protein [Arabidopsis thaliana] >gi122215273|sp|Q3ECD0.1|PUS2_ARATH RecName: Full=RNA ps... |
|
| arabidopsis/peptide [blastx] | Showing best 2 hits recorded |
| Match: At1G76050.2 |
score: 75.9 |
e-value: 8e-19 |
Identity: 59.65% |
Span: 171bp (21.5%) |
Frame: -1 |
| pseudouridine synthase family protein | chr1:28545752-28547720 FORWARD |
| Match: At1G76050.2 |
score: 33.1 |
e-value: 8e-19 |
Identity: 46.88% |
Span: 96bp (12.0%) |
Frame: -3 |
| pseudouridine synthase family protein | chr1:28545752-28547720 FORWARD |
|
| swissprot [blastx] | Showing best 4 hits recorded |
| Match: Q5Z8P2 |
score: 87.4 |
e-value: 3e-21 |
Identity: 70.91% |
Span: 165bp (20.7%) |
Frame: -1 |
| RNA pseudourine synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0717400 PE=2 SV=1 |
| Match: Q3ECD0 |
score: 75.9 |
e-value: 1e-17 |
Identity: 59.65% |
Span: 171bp (21.5%) |
Frame: -1 |
| RNA pseudourine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=At1g76050 PE=2 SV=1 |
| Match: Q5Z8P2 |
score: 33.9 |
e-value: 3e-21 |
Identity: 40% |
Span: 90bp (11.3%) |
Frame: -3 |
| RNA pseudourine synthase 2, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0717400 PE=2 SV=1 |
| Match: Q3ECD0 |
score: 33.1 |
e-value: 1e-17 |
Identity: 46.88% |
Span: 96bp (12.0%) |
Frame: -3 |
| RNA pseudourine synthase 2, chloroplastic OS=Arabidopsis thaliana GN=At1g76050 PE=2 SV=1 |
|
