EST details — SGN-C87940

Search information 
Request: 87940Match: SGN-C87940
Request From: SGN database generated linkMatch Type: cDNA clone internal identifier
Clone information 
SGN ID: SGN-C87940Clone name: cLET-6-G21
cartOrder Clone
Library Name: cLETOrganism: Solanum lycopersicum (formerly Lycopersicon esculentum)

Tissue: leaf
Development Stage: 4-6 weeks

Microarray: Alias clone SGN-C184809 is on microarray TOM1: SGN-S1-1-2.4.14.17
There is no map position defined on SGN for this EST or others in the same unigene.
Additional sequencing 
Clone: SGN-C184809 [TUS-45-L23] Trace: SGN-T198735 EST: SGN-E397409 Direction: 5' Facility: INRA
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Sequence 
Sequence Id: SGN-E291664Length: 524 bp (974 bp untrimmed)
Status: Current VersionDirection: 5'
>SGN-E291664 [] (trimmed) AATTCTACTCAGCCACACTAATTTATCAACCCTGCTATGGCTGGTTTGCTGGAAACTATCGCAGTTCCTCGGGCCGCCGCCGCCGCTGCTTCGCC
GTCGTTGTCTCCTGTTTCCGGTCGCCGGTCTTCTGTTAAATTCTCTCTATTCAATGGTCTTAAGATCCAGTCGACTCGTTCATCAGTATCCTTTA
GCTCATTTACAAAATCTGTTCCCAGTAGAGGAGGAAGAATCGTCTGTGAGGCTCAGGATACTGCTGTTCTAGTGCCTGGTGTTAATGATCAATCA
TGGGAGACTCTTGTAATCGGGTCTAAGTTACCTGTTCTGGTTGAATTTTGGGCTCCATGGTGTGGTCCATGCAGAATGATTCACCCGGTTATTGA
TGAACTATCACAGGAATTTGCTGACAAGTTTAAATTCTTCAAGGTGAACACGGATGAAAGTCCTGGCATCGCGACCAGATATGGGATTCGAAGTA
TCCCAACCGTCATGATTNTCAAGGATGGAGAGAAGAAAGATACAGTCAT
[BLAST]  [AA Translate]
Unigenes 
Current Unigene builds
[SGN-E291664] SGN-U569423 Tomato 200607 Build 2 24 ESTs assembled
Follow SGN-U# link for detailed information and annotations
Chromatogram 
SGN-ID: SGN-T103917 [Download][View] Facility Assigned ID: TMEAU47TH
Submitter: Koni Sequencing Facility: TIGR
Funding Organization: National Science Foundation
Quality processing 
Processed By: SGN Basecalling Software: phred
Vector Signature: 5' sequence read, incomplete (flanking vector not found)
Passed all screens and filters
Sequence Entropy: 0.988 Expected Error Rate: 0.0106 Quality Trim Threshold: 14.5