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Clone Read LE_HBa0146A18_SP6_71842

Sequence Read 
Read Class
BAC ends
Read ID
LE_HBa0146A18_SP6_71842
Primer
SP6
ID from Seq. Facility
LE_HBa_146_A18-SP6
Chromatogram
[download]
Sequence 
Version
1 (current)
Length (bp)
644 trimmed for vector and quality, 838 raw
Genbank Accession
DU064602
Sequence
>LE_HBa0146A18_SP6_71842 (raw untrimmed)
TATTTAAATGGAAGATAGTAGAGTGTGAGGTCCTTTTAATTCATTATGACAATCATTTTACATTTCCACACATGTTCTGAAAATCCATGAGCAGGGGAAA
TAGATGAAGGCATTCAAACACATAAAAAACACAAAATTAAAACAAATAAGTATCCATAAGCATTACTTTACAGCCTACACGTGAATGCACGCCCTTTGAA
AGACATGAATTTTCAAAGTCCAATGTTTTGTGGCATAGACCCTTGTTAAAAAAGACATAATACATAAACATGACCCTTAACTTGGCGTCAAACAACAATG
ACCTTTAACTTTTGGTGTACACAAGTAAGCACTTAAACTTGTATAGCGTGTGTCTGTTTAATTTTATACAAGTTTAAGTGCTTAGTTGTGCACAATCAAA
GTTGGAGGGCATAGTTGTTCGTTGAAGTCAAGTCAAGGGTCATAATTATGTATGCCTTGAAAAACTGTTAAGGCAGTTCAAAGGGAGATGAGCTGAAAAG
GTGTTGATAGGTCAAGTTGAGTCCCTAGACTTGGTAGCAAACACCTTAACACAGACAGCTGTGAACGTGACACACAAAGGAATGAAAAGAACTGAAAGGA
AATGAACTGAAACAACTTGCCGCAGCATTATTTAAAGGTGTACAAGATAGATCCTAACTGAAATAACACCAGTGCCAGCTGAGGAATTTAATAAATCTTG
GTAAAATGAAGAAATGAAATTTTATTTTGATAAAATTGAATATATTTACGATAGGTTCGTATATTAATTTAGGAATGGGAAATTAACTGAAATGAAGCAA
ATAAGGCCTCAAGAAATTCTAAATTATGGGTTCTGTAT
>LE_HBa0146A18_SP6_71842 (trimmed for quality and cloning vector)
TAGAGTGTGAGGTCCTTTTAATTCATTATGACAATCATTTTACATTTCCACACATGTTCTGAAAATCCATGAGCAGGGGAAATAGATGAAGGCATTCAAA
CACATAAAAAACACAAAATTAAAACAAATAAGTATCCATAAGCATTACTTTACAGCCTACACGTGAATGCACGCCCTTTGAAAGACATGAATTTTCAAAG
TCCAATGTTTTGTGGCATAGACCCTTGTTAAAAAAGACATAATACATAAACATGACCCTTAACTTGGCGTCAAACAACAATGACCTTTAACTTTTGGTGT
ACACAAGTAAGCACTTAAACTTGTATAGCGTGTGTCTGTTTAATTTTATACAAGTTTAAGTGCTTAGTTGTGCACAATCAAAGTTGGAGGGCATAGTTGT
TCGTTGAAGTCAAGTCAAGGGTCATAATTATGTATGCCTTGAAAAACTGTTAAGGCAGTTCAAAGGGAGATGAGCTGAAAAGGTGTTGATAGGTCAAGTT
GAGTCCCTAGACTTGGTAGCAAACACCTTAACACAGACAGCTGTGAACGTGACACACAAAGGAATGAAAAGAACTGAAAGGAAATGAACTGAAACAACTT
GCCGCAGCATTATTTAAAGGTGTACAAGATAGATCCTAACTGAA

Warnings:
  • Not screened for chimera
  • Not screened for repetitive elements
Quality Report
Processed by
SGN
Vector signature
flanking vector not found in read
Quality trim threshold
20.5
Sequence entropy
0.947312
Expected error %
0.218122
Sequence Annotations 
Automatic Annotations
No automatic annotations found.
Manual Annotations
No manual annotations found.
BAC 
Clone LE_HBa0146A18
Clone
Clone name
hba-146a18
LE_HBa0146A18
C07HBa0146A18
P146A18
Clone type
BAC
Contamination
none
Estimated length
90,071
Library
Name
Tomato HindIII BAC Library
Cloning host
E. coli
Organism
Solanum lycopersicum (formerly Lycopersicon esculentum)
Cloning vector
pBeloBAC11
Accession
Heinz 1706
Restriction enzyme
HindIII

Other Reads:
1 sequencing reads found