>SGN-U360449 Coffea canephora #2 [1 ESTs aligned] arabidopsis/peptide: AT3G23780.1 | Symbol: None | This gene encodes a catalytic subunit of the nuclear DNA-dependent RNA polymerase IV. The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. | chr3:8567738-8574197 REVERSE | Aliases: MYM9.13 (evalue: 4e-07, score=50.8)
GACGGACCTTCAAGAGCATTTCCAACTGCAGCATGGTCACATCCTTACAAGAAGATGGAA
AGGGTTTCTGGAGTGGTCGCTGCCCTAGGCTATCGGGTCCTTCCCGGGAACTCTGGCAGG
AGCCTCGTCCTCCTCCAGGGGAACCTCCTCCAGGTCAGCTCCCACATCACTCCTGCCTGC
TAGCTCCTTCAGGGCATGCCCCTTGTAATACCCCTCGAAGAGCCAGTCTACCCTCTCCTC
AGCAGTAGGATTGTACTCTTTGAACGCGGCCAAGTCGAAGCCAGGCAGGCCAAGCCCTTT
GACCCGGTCCAGGGCTCGCGTGAAGCCGATCTGGAGGATGGGCTGGTTGAGGAGAGCGAC
GTCCTCGGCAAACTGTTGGGAGGAGATGAACTCCCGAATAGCCTTCTTTCGCTCCCGGCT
GAGGATGCCGGTGAGCTCGATGGCGTGGTCCTCCCTCAACTTGGCCACGCCAGCCTTCTC
CTGGTCGAGCTCCGACCTAGCGGAGG
