>SGN-U349675 Coffea canephora #2 [9 ESTs aligned] arabidopsis/peptide: AT3G23780.1 | Symbol: None | This gene encodes a catalytic subunit of the nuclear DNA-dependent RNA polymerase IV. The NRPD2 protein is found at nuclear foci that overlap or are adjacent to chromocentromeres but are not fully coincident with chromocentromeres. The loss of NRPD2 leads to the loss of cytosine methylation at pericentromeric 5S genes and AtSN1 retroelements but has no discernible effect on centromere repeat methylation. This suggests that Pol IV primarily affects facultative heterochromatin rather than constitutive heterochromatin. | chr3:8567738-8574197 REVERSE | Aliases: MYM9.13 (evalue: 9e-130, score=459) genbank/nr: RNA(evalue: 2e-141, score=504)
GTGTGAAACTAAAGCACACTGAAAAAGGCATGGTTCAGAAGGTTGTACTGTCAGCTAATG
ATGAGGGCAAGAACTTTGCTGTGGTATCTCTGAGGCAGGTTCGTTCTCCAGGTCTGGGCG
ACAAGTTTTCAAGCATGCATGGGCAGAAGGGTGTTCTGGGTTTCCTAGAATCTCAGGAGA
ATTTTCCATTTACGGCACAAGGAATAGTTCCAGATATCGTAATTAATCCACATGCATTTC
CTTCACGACAAACTCCTGGTCAACTTTTAGAGGCTGCATTGGCTAAGGGAATTGCTCTAG
GAGGTGCACAGAAATATGCCACACCTTTTTCGACCTTATCTGTTGATGCTATAGGAGACC
AACTTCAGAGGCTTGGATTTTCAAGGTGGGGAAATGAGAGAATGTACAATGGTCGAACAG
GTGAAATGATTCATACTATGGTTTTCATGGGTCCGACATTTTATCAACGCCTTACTCATA
TGGCTGAAGATAAAGTCAAATTTCGGAACACGGGACCAGTCCATCCACTCACTCGTCAGC
CAGTGGCAGACAGGAAGCGGTTTGGTGGGATAAAATTTGGTGAGATGGAACGGGATTGCC
TTATAGCTCATGGTGCTGCATCAAATTTGCATGAACGCCTCTTCACTCTCAGCGATTCTT
CAGAGATGCATATCTGTCGCAAATGCAGGAGTATGGCCAATGTAATCCAGAGGCCAGTGT
TCGGTGGCCGCAAGATTCGTGGCCCTTTCTGTCGGTTATGTGAGTCTGCAGAAGACATTG
TTAGGGTGAATGTGCCTTATGGTGCCAAGTTGCTCTGTCAAGAGCTTTTCAGCATGGGCA
TATCTCTGAAGTTTGACACCGAGTTATGCTGAGCTTCAGTTATTTTCTTGGATGTATTGG
TTATAATCCTGAATGCTTTATAAATACTTAGTTTCATAACAAGTGCATACAACGATGACA
TGGATTTTAAGCATTTGAATGAACATGTCTGTGCATAGAATGTTAAAAATAACTTCCAGC
TCCCAAGCACAAGCAAGCAGTCAAGTT
