#Draft Tomato chromosome 3
#autogenerated-by SGN mummer/phrap AGP generator (bsub_generate_agp.pl)
S.lycopersicum-chr3	1	7200000	1	N	7200000	contig	no	
S.lycopersicum-chr3	7200001	7334937	2	F	C03HBa0007J09.1	1	134937	+
S.lycopersicum-chr3	7334938	7480000	3	N	145063	contig	no	
S.lycopersicum-chr3	7480001	7606965	4	F	C03HBa0127K18.1	1	126965	+
S.lycopersicum-chr3	7606966	9200000	5	N	1593035	contig	no	
S.lycopersicum-chr3	9200001	9282956	6	F	C03HBa0040F22.1	1	82956	+
S.lycopersicum-chr3	9282957	9600000	7	N	317044	contig	no	
S.lycopersicum-chr3	9600001	9765849	8	F	C03HBa0054O21.1	1	165849	+
S.lycopersicum-chr3	9765850	10500000	9	N	734151	contig	no	
S.lycopersicum-chr3	10500001	10617727	10	F	C03HBa0233O20.1	1	117727	+
S.lycopersicum-chr3	10617728	12300000	11	N	1682273	contig	no	
S.lycopersicum-chr3	12300001	12402153	12	F	C03HBa0323D22.1	1	102153	+
S.lycopersicum-chr3	12402154	13300000	13	N	897847	contig	no	
S.lycopersicum-chr3	13300001	13413681	14	F	C03HBa0012D06.1	1	113681	+
S.lycopersicum-chr3	13413682	13700000	15	N	286319	contig	no	
S.lycopersicum-chr3	13700001	13826477	16	F	C03HBa0034B23.2	1	126477	+
S.lycopersicum-chr3	13826478	13876477	17	N	50000	contig	no	
S.lycopersicum-chr3	13876478	13999793	18	F	C03HBa0033A22.1	1	123316	+
S.lycopersicum-chr3	13999794	16000000	19	N	2000207	contig	no	
S.lycopersicum-chr3	16000001	16119102	20	F	C03HBa0001E24.1	1	119102	+
S.lycopersicum-chr3	16119103	16400000	21	N	280898	contig	no	
S.lycopersicum-chr3	16400001	16431852	22	F	C03HBa0295I12.1	1	31852	+
S.lycopersicum-chr3	16431853	16900000	23	N	468148	contig	no	
S.lycopersicum-chr3	16900001	17090913	24	F	C03HBa0143N09.1	1	190913	+
S.lycopersicum-chr3	17090914	17140913	25	N	50000	contig	no	
S.lycopersicum-chr3	17140914	17260868	26	F	C03HBa0030O03.1	1	119955	+
# END OF DRAFT CHROMOSOME BUILD.  THE LINES BELOW CONTAIN SEQUENCES THAT COULD NOT BE LOCATED ON THE PHYSICAL MAP
S.lycopersicum-chr3	17260869	60000000	27	N	42739132	contig	no	
S.lycopersicum-chr3	60000001	60120802	28	F	C03HBa0030F10.1	1	120802	+