<?xml version="1.0" encoding="ISO-8859-1"?>

<game version="1.1">
  <!-- Curational annotations from Apollo -->
  <!-- Analysis of: C12HBa0032K07.2 -->
  <!-- Original input read from /Users/mueller/SGN/tomato_bac_training_set/cleaned_bacs/C12HBa0032K07.gth.rm.xml -->
  <!-- Saved on Fri Sep 01 18:51:13 GMT 2006 -->
  <!-- Apollo version: Apollo Genome Annotation and Curation Tool, version 1.6.5, last updated Jun 27 2006, 15:20 -->
  
  <seq focus="true" id="C12HBa0032K07.2" length="2952">
    <name>C12HBa0032K07.2</name>
    <residues>AAACAAAACTGAAAAGATAAAATAACTAAACCTCAGATCTTTCTCATGGGGAAAGATATTAATACATGTCTAGGAGTGTTATCAATATCAATACTAAATGAAACCATGCTTATCATTAACTACTGAAGGTCATATTGTGCAGGTCCACACAACACAATCTTGAGAACTAGACCTGAGTTATGCCTTCAGTGAACTTAGGATCCTCACATCTGTACCTTCCATCAGGCCCAATTCTGAATCTCCTAGGATCACCAAATACATTCTCAGCAGCTGGTTACGAGCTGGAACGGGGCTTGCACTGCAAACTCAACAGACTCTTCAACCGATTCATCAATCTTCTTATCGATGGCCTTTAACTCTGCTTCATTTACCAAGTTATTTTCAAAGATATACTTCTTCAAGATAGTGATAGGATCTTTTGTGGCATAGTGATTCTTTTTAGCTACCAAAACGAACACATTAAGGTCAAAGAAATAACGTATTGCCTCCACATATAAGGGTACACGTGAAACAAAATAAGATAATAGAGTTTAAAAGGCTCATTCTCTTGTGGTACACGGTCATACAACATTTCTACAAAGGAATTTCGGAGCATCAGAGCTTTTTTCTGGTGTTTTTGTTCCTTTTGTTTTGGAGGTATATCTCCCTAAGCGAATACATCTAGTGGTGTCCCTGAGATACTTCATGTAACATCTGTCTTAGAGTAAATGGAAGCTATAAATAATCAAATAGAAGTGCTCCTCATTTACATTTACACAGTTGCTCACAAAAATCACTATCTCAACAGTTTCAACACAATCAGCCAATTTGAGGCTTCTCATGCGAAATGGCACTATCCACTTATATGCTATGTGATTGTGTAGACATATTACTAAAAAGAAGTGGTCCGCTATTGTGCTAAGAAATTGTTTGGTTACACATAGCATTCACTACAAAATATGCCAGAGGTAAGTCAAAAAGATTTAATGAGTTCTCAGACAAGCTGGCTAAAGTTAATTTGATTCATTAATAGCTCTTTATTAAGTGCTAAAGGTTTACCCTTCCAAACCTTAGTAAACACAGGCTACAACCATTGTCGGATAACACTGATAAAAAGCAGCAGTATCAAAGAAACAACAACAAGTGGTTTGAGGATAATAACACAAGTAAGCTGGAAGAATTTAAGACAGTTGAGCAAGGGAAATGAAACACTCACTAGGGTCACGAAGCTCATCTCAATCAGCCAAAGAGTGTCATCTGAACTGGTAGGTCTCATATTTAATCAAAGTAGGACCTTTCCCTTACTAGCTCTGCTAACAACCTCCATTGCTACCTCCCTTACCTTCAACACATCCATTCCATCAACATGAACCTCGGGCATCCCAAAGGCAGGACCTTTCTTCTAAATTTCAGGATCAAAAGTAGATCTCAAGTGGGACATCCCAATTGCCCACAGATTGTTCTCATCAACAAAGATAATAGGCAATTTCCACAAAGCGGCCATGTTCAAGCACTCATAAAATTGTCCATTGTTGCAAGTTCCATCACCAAAGAAAGACAAAGTGACGTGATCACAATCATCCTCCTTCAAAACCTCCATTTTGTACTTCCTAGTGAATGCAACACATGTAGCCACTTGGATTCCCTCACCAATAAAGGCGAAACCACCAAGAACGTTGTGCTCTTTGGAAAACATGTGCATCGATCCACCCTAGCCTCTACAACAGCCCATGGTCTTTCCAAATAGCTCACTCATCACTTGACGAGCTGGGACACCTTTGCTCAATGCATGGACATGATGAAGATAAGTGCTAACTACAGAGTCGTCCTTCTTCAAGAGTGTGATCAAACCAGTTGAAACAACTTCTTGGCCATTGTACAAATGCACAAAACCAAACATTTTGCCCCTGTAATACATTTGGGCGCACATGTCCTCAAAAGCTCTTCCCAACACAATGTCCTCGTACAATACCAATTCTTCCTCCTTAGTAATCATTTAAATGAAACAACAGACATAGATAATCACAGAAACTCGAATCTTTTCAAACAACTACATGCTATAAGATAAATTATAAGAATATTAAACACTAAATTACCACAATAACAAATATTGGGTCAAAAGTTGCATGACAAAAATAAAAACTGAGCTTGCAAATGCCAAAATTATCAAAATTGGGATGGACCAACAAACACAACTATTTAACAAAATCACAAACAAGACGAATAATGCAAACAACTACAATGTCATATGGCATTCAAAAATAAGCACTAAATCAAAATGAAGAACACTCAAAAGACTTAGCGATCCAAAAAAGGATGAATCTTTAGCAGACAACAGAATTTTCATACGAATAATCTAAACAAACAAGCACTAAATCACTATAAAAAAAACATGAAGATTAAAGTTACTCCTAAAGTAACAAATTGAGCATGACCCAAATGAAAAATCGAGCTTGAATAGACAAAATCAACAAACAAACAGGGAAAAATCAAGATATACTAGATTGGAGATAGAAGATTTGGACTTCGATTTCTTTTCATTAACAACATCAGAAACGGCGACAACATCATTATTGGATCGGCATTGTGATTAATGAGGATAGAAATTCTTATTGAGGGAAAGATTATGAGAAGATTGTCCAAGAAAAGAAGAGCTACCCTCTAGAGATTGAGCCAAAAGGGGGTTTTCAGCAGATGTAGTAGAGTAAAGGGGCAAAGGTTGCAAAACTTTTGTTGCAGAGAATGACGTCGTCATGGATGAATTACAAGAAATGTGAGTAAGACATGAATGATTATATAATTAAAAGACATAAAAAGGGAAAAATTAGGCGGAGGAAATGAGAAAGCGAATGTATATAAATAACCGTCAAGAGCGTTGGTTGCTCTCTACTGGGCTTTCTTGTCTTCTCATCCTAAATTTTGTCTTCTAATTTGTGGGTATAGTTGGTTTCACAATAAAATAATAAAACTATA</residues>
  </seq>
  
  <map_position seq="C12HBa0032K07.2">
    <span>
      <start>1</start>
      <end>2952</end>
    </span>
  </map_position>
  
  
  <annotation id="gene_8">
    <name>gene_8</name>
    <type>gene</type>
    <feature_set id="gene_8">
      <name>GT_PGL_7_AGS_1</name>
      <type>transcript</type>
      <author>mueller</author>
      <date timestamp="1157054970000">Thu Aug 31 20:09:30 GMT 2006</date>
      <property>
        <type>seq_id</type>
        <value>C12HBa0032K07.2</value>
      </property>
      <property>
        <type>non_canonical_splice_site</type>
        <value>unapproved</value>
      </property>
      <property>
        <type>non_canonical_splice_site</type>
        <value>unapproved</value>
      </property>
      <property>
        <type>source</type>
        <value>GenomeThreader</value>
      </property>
      <feature_span id="temp">
        <type>polypeptide</type>
        <name>temp</name>
        <seq_relationship seq="C12HBa0032K07.2" type="query">
          <span>
            <start>1681</start>
            <end>1385</end>
          </span>
        </seq_relationship>
      </feature_span>
      <property>
        <type>non_canonical_splice_site</type>
        <value>unapproved</value>
      </property>
      <feature_span>
        <type>exon</type>
        <seq_relationship seq="C12HBa0032K07.2" type="query">
          <span>
            <start>2752</start>
            <end>2480</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship seq="C12HBa0032K07.2" type="query">
          <span>
            <start>1975</start>
            <end>1196</end>
          </span>
        </seq_relationship>
      </feature_span>
      <feature_span>
        <type>exon</type>
        <seq_relationship seq="C12HBa0032K07.2" type="query">
          <span>
            <start>442</start>
            <end>201</end>
          </span>
        </seq_relationship>
      </feature_span>
    </feature_set>
  </annotation>
  
  
  <seq id="gene_17-RA" length="1340">
    <name>gene_17-RA</name>
    <residues>
      CTGTAGTTTTTTATTGTTGACAGTTTGTAGTGCTCCCAAACAGTTAGTAA
      TTAATGAAAAAAATGAAAACAAAGAAGAGTCTATATCTTACTATATTTGT
      AATATTTGAAAAACTTAGTGCAACTTGCTTGGTATTTCTTGCAGATTATC
      ATGCCAAGACTAGGTTGGAGATGGTTATTGGCTTTATCGTCTATACCATC
      ATTTGCAGCTTTTCTCTTGTACATTTTTACTGTAGAGTCTCCTAGATATC
      TATGTGCCGAAGGTAGAATAACTGATGCACATGATATTTTGAGGAAAATA
      GCTGTTGTTAATCAGACAAAACTTCCCCCTGGGATGCTTGTTTCTGATCA
      AGTGATAGAGCTGGATGAGGAACAGAAATTGCTTAGGCCGAGAGCCAACA
      AAATCTTCAATTTTAAGACAGGATTGTCTTCATCCCTGATGCTTTTATCC
      CCACAATTACTACGAATTACCCTCCTCATGTGGGTGGTTTATTTTGGAAA
      TTCATTTGCCTATTATGGCATTATATTGCTGACATCACAGTTTAGTGCTG
      GGGAAAATAGATGCTTCTCAGTTGCTTTGCATGTGAAAAATGATTCAAGC
      CTCTATACAGACGTGTTCATCACTAGCCTTGCTGGTACTTTTTCTTTCAT
      TTTCTTGTGTCAAATTGCGATTCAATTATTTCATCTCAGCTCCCATTAGA
      CTTAATTACAATTTGTAAATCTAAGTTATTCTTTGTCTTCCAGAGCTTCC
      TGGGCTTCTTATTTCAGCTGTAGTGGTGGAGAAAGTTGGTCGGAAATATT
      CAATGGCACTGATGTATATCTTCGGGTCCCTATTCCTTTTTCCGCTTGTT
      GTACCTCAGAATGAGGCATTAACAACAGCATTGCTATTTGGAGCTCGTAT
      CTGGTTCATAGGGACCTTCACCCTTGCTGGTGTTTATTGTCCAGAGATTT
      ATCCAACCTCAGTTAGATCAACTGGTTGTGGAGTTGCAAGTGCTGTGGGG
      AGAATTGCAGGGATGGTCTCTCCTATAGTTGCAGTGCAATTGGTTAGAGG
      TTGCCACCAGATGGCTGCAATCATTTTATTTGAAGTGGTTGTTATTTTAT
      CAGCAATTAGTGTTCTGCTCTTTCCAGTTGAGACCAAGGGGCGTGAGCTT
      GTTGATCATGTCTCTGTATAGGAAATCGTATACCAATTACTATGTTATGT
      TAATGTGTTCTCCACATTGGAGGGAAATCTATTGAAGACACAGCTCTCTA
      AGTCATGTTGGTACTATTTACAGTATCATGTTCCAACCTCAAATTTCGTT
      AATCATGTAAGATGTTATCTTATCAATGTATAGAAGTTAA
    </residues>
  </seq>
  
  <seq id="SGN-E270053" length="0">
    <name>SGN-E270053</name>
  </seq>
  
  <seq id="SGN-E419961" length="0">
    <name>SGN-E419961</name>
  </seq>
  
  <seq id="SGN-E445399" length="0">
    <name>SGN-E445399</name>
  </seq>
  
  <seq id="SGN-E479293" length="0">
    <name>SGN-E479293</name>
  </seq>
  
  <seq id="SGN-E302409" length="0">
    <name>SGN-E302409</name>
  </seq>
  
  <seq id="SGN-E484692" length="0">
    <name>SGN-E484692</name>
  </seq>
  
  <seq id="SGN-E414944" length="0">
    <name>SGN-E414944</name>
  </seq>
  
  <seq id="SGN-E474788" length="0">
    <name>SGN-E474788</name>
  </seq>
  
  <seq id="SGN-E255780" length="0">
    <name>SGN-E255780</name>
  </seq>
  
  <seq id="SGN-E398779" length="0">
    <name>SGN-E398779</name>
  </seq>
  
  <seq id="SGN-E256209" length="0">
    <name>SGN-E256209</name>
  </seq>
  
  <seq id="SGN-E201576" length="0">
    <name>SGN-E201576</name>
  </seq>
  
  <seq id="SGN-E542300" length="0">
    <name>SGN-E542300</name>
  </seq>
  
  <seq id="SGN-E300279" length="0">
    <name>SGN-E300279</name>
  </seq>
  
  <seq id="SGN-E203560" length="0">
    <name>SGN-E203560</name>
  </seq>
  
  <seq id="SGN-E411769" length="0">
    <name>SGN-E411769</name>
  </seq>
  
  <seq id="SGN-E409474" length="0">
    <name>SGN-E409474</name>
  </seq>
  
  <seq id="SGN-E450907" length="0">
    <name>SGN-E450907</name>
  </seq>
  
  <seq id="SGN-E423640" length="0">
    <name>SGN-E423640</name>
  </seq>
  
  <seq id="SGN-E339458" length="0">
    <name>SGN-E339458</name>
  </seq>
  
  <seq id="SGN-E246767" length="0">
    <name>SGN-E246767</name>
  </seq>
  
  <seq id="SGN-E392161" length="0">
    <name>SGN-E392161</name>
  </seq>
  
  <seq id="SGN-E369525" length="0">
    <name>SGN-E369525</name>
  </seq>
  
  <seq id="SGN-E247088" length="0">
    <name>SGN-E247088</name>
  </seq>
  
  <seq id="SGN-E247066" length="0">
    <name>SGN-E247066</name>
  </seq>
  
  <seq id="SGN-E423641" length="0">
    <name>SGN-E423641</name>
  </seq>
  
  <seq id="SGN-E237374" length="0">
    <name>SGN-E237374</name>
  </seq>
  
  <seq id="SGN-E236927" length="0">
    <name>SGN-E236927</name>
  </seq>
  
  <seq id="SGN-E550240" length="0">
    <name>SGN-E550240</name>
  </seq>
  
  <seq id="SGN-E389671" length="0">
    <name>SGN-E389671</name>
  </seq>
  
  <seq id="SGN-E255643" length="0">
    <name>SGN-E255643</name>
  </seq>
  
  <seq id="SGN-E318231" length="0">
    <name>SGN-E318231</name>
  </seq>
  
  <seq id="SGN-E419962" length="0">
    <name>SGN-E419962</name>
  </seq>
  
  <seq id="SGN-E414945" length="0">
    <name>SGN-E414945</name>
  </seq>
  
  <seq id="SGN-E332132" length="0">
    <name>SGN-E332132</name>
  </seq>
  
  <seq id="SGN-E622421" length="0">
    <name>SGN-E622421</name>
  </seq>
  
  <seq id="SGN-E456940" length="0">
    <name>SGN-E456940</name>
  </seq>
  
  <seq id="SGN-E276523" length="0">
    <name>SGN-E276523</name>
  </seq>
  
  <seq id="SGN-E483999" length="0">
    <name>SGN-E483999</name>
  </seq>
  
  <seq id="SGN-E416897" length="0">
    <name>SGN-E416897</name>
  </seq>
  
  <seq id="SGN-E456087" length="0">
    <name>SGN-E456087</name>
  </seq>
  
  <seq id="SGN-E578663" length="0">
    <name>SGN-E578663</name>
  </seq>
  
  <seq id="SGN-E558495" length="0">
    <name>SGN-E558495</name>
  </seq>
  
  <seq id="SGN-E546071" length="0">
    <name>SGN-E546071</name>
  </seq>
  
  <seq id="SGN-E469561" length="0">
    <name>SGN-E469561</name>
  </seq>
  
  <seq id="SGN-E236841" length="0">
    <name>SGN-E236841</name>
  </seq>
  
  <seq id="SGN-E236743" length="0">
    <name>SGN-E236743</name>
  </seq>
  
  <seq id="SGN-E375586" length="0">
    <name>SGN-E375586</name>
  </seq>
  
  <seq id="SGN-E375587" length="0">
    <name>SGN-E375587</name>
  </seq>
  
  <seq id="SGN-E255322" length="0">
    <name>SGN-E255322</name>
  </seq>
  
  <seq id="SGN-E255108" length="0">
    <name>SGN-E255108</name>
  </seq>
  
  <seq id="SGN-E253844" length="0">
    <name>SGN-E253844</name>
  </seq>
  
  <seq id="SGN-E315780" length="0">
    <name>SGN-E315780</name>
  </seq>
  
  <seq id="SGN-E239136" length="0">
    <name>SGN-E239136</name>
  </seq>
  
  <seq id="Contig32" length="0">
    <name>Contig32</name>
  </seq>
  
  <seq id="Contig30" length="0">
    <name>Contig30</name>
  </seq>
  
  <seq id="Contig50" length="0">
    <name>Contig50</name>
  </seq>
  
  <seq id="Contig1592" length="0">
    <name>Contig1592</name>
  </seq>
  
  <seq id="hind_R=1420" length="0">
    <name>hind_R=1420</name>
  </seq>
  
  <seq id="hind_R=1012" length="0">
    <name>hind_R=1012</name>
  </seq>
  
  <seq id="Contig375" length="0">
    <name>Contig375</name>
  </seq>
  
  <seq id="eco_R=126" length="0">
    <name>eco_R=126</name>
  </seq>
  
  <seq id="Contig1258" length="0">
    <name>Contig1258</name>
  </seq>
  
  <seq id="Contig501" length="0">
    <name>Contig501</name>
  </seq>
  
  <seq id="Contig568" length="0">
    <name>Contig568</name>
  </seq>
  
  <seq id="Contig52" length="0">
    <name>Contig52</name>
  </seq>
  
  <seq id="Contig27" length="0">
    <name>Contig27</name>
  </seq>
  
  <seq id="Contig1693" length="0">
    <name>Contig1693</name>
  </seq>
  
  <seq id="Contig157" length="0">
    <name>Contig157</name>
  </seq>
  
  <seq id="Contig372" length="0">
    <name>Contig372</name>
  </seq>
  
  <seq id="Contig1836" length="0">
    <name>Contig1836</name>
  </seq>
  
  <seq id="Contig1202" length="0">
    <name>Contig1202</name>
  </seq>
  
  <seq id="Contig1212" length="0">
    <name>Contig1212</name>
  </seq>
  
  <seq id="Contig1231" length="0">
    <name>Contig1231</name>
  </seq>
  
  <seq id="Contig389" length="0">
    <name>Contig389</name>
  </seq>
  
  <seq id="Contig915" length="0">
    <name>Contig915</name>
  </seq>
  
  <seq id="Contig358" length="0">
    <name>Contig358</name>
  </seq>
  
  <seq id="Contig45" length="0">
    <name>Contig45</name>
  </seq>
  
  <seq id="Contig1667" length="0">
    <name>Contig1667</name>
  </seq>
  
  <seq id="Contig1559" length="0">
    <name>Contig1559</name>
  </seq>
  
  <seq id="Contig1152" length="0">
    <name>Contig1152</name>
  </seq>
  
  <seq id="Contig1454" length="0">
    <name>Contig1454</name>
  </seq>
  
  <seq id="eco_R=1260" length="0">
    <name>eco_R=1260</name>
  </seq>
  
  <seq id="Contig153" length="0">
    <name>Contig153</name>
  </seq>
  
  <seq id="Contig390" length="0">
    <name>Contig390</name>
  </seq>
  
  <seq id="Contig1268" length="0">
    <name>Contig1268</name>
  </seq>
  
  <seq id="Contig215" length="0">
    <name>Contig215</name>
  </seq>
  
  <seq id="Contig1301" length="0">
    <name>Contig1301</name>
  </seq>
  
  <seq id="Contig1207" length="0">
    <name>Contig1207</name>
  </seq>
  
  <seq id="hind_R=1702" length="0">
    <name>hind_R=1702</name>
  </seq>
  
  
  
  
</game>
