##gff-version 3
##sequence-region C12HBa0075C18.1 1 115736
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	41	4541	33359	+	0	ID=Contig4_alignment_1;Target=Contig4 4765 9293 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	4296	5223	6305	-	0	ID=Contig58_alignment_1;Target=Contig58 3218 4143 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	4941	8718	30371	+	0	ID=Contig4_alignment_2;Target=Contig4 1 3777 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	9974	10010	242	-	0	ID=Contig443_alignment_1;Target=Contig443 165 201 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	10061	10780	3945	-	0	ID=Contig4_alignment_3;Target=Contig4 3667 4378 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	10276	11139	4685	+	0	ID=Contig409_alignment_1;Target=Contig409 250 1100 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	10732	12139	9253	-	0	ID=Contig4_alignment_4;Target=Contig4 2364 3760 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	12132	12368	1860	-	0	ID=Contig1244_alignment_1;Target=Contig1244 7 243 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	14438	14573	1156	-	0	ID=Contig1080_alignment_1;Target=Contig1080 274 409 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	14600	14979	2240	-	0	ID=Contig1080_alignment_2;Target=Contig1080 29 377 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	14964	17111	16720	-	0	ID=Contig4_alignment_5;Target=Contig4 2803 4925 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	17113	18214	8387	-	0	ID=Contig4_alignment_6;Target=Contig4 1032 2121 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	18215	18909	5328	-	0	ID=Contig4_alignment_7;Target=Contig4 276 953 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	18315	19306	7147	-	0	ID=Contig9_alignment_1;Target=Contig9 1 994 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	18532	22644	29747	+	0	ID=Contig58_alignment_2;Target=Contig58 1 4143 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	22394	23463	4535	-	0	ID=Contig4_alignment_8;Target=Contig4 8215 9291 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	22988	23593	2805	-	0	ID=Contig4_alignment_9;Target=Contig4 8199 8797 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	23603	24209	4448	-	0	ID=Contig4_alignment_10;Target=Contig4 2975 3585 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	24208	24291	577	-	0	ID=Contig4_alignment_11;Target=Contig4 2797 2881 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	24307	24380	314	-	0	ID=hind_R%3D9729_alignment_1;Target=hind_R%3D9729 437 510 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	24350	24390	310	-	0	ID=hind_R%3D9729_alignment_2;Target=hind_R%3D9729 469 509 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	24391	24914	2448	-	0	ID=hind_R%3D9729_alignment_3;Target=hind_R%3D9729 1 510 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	24925	25052	1022	+	0	ID=Contig1281_alignment_1;Target=Contig1281 1 128 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	25267	26435	7833	-	0	ID=Contig1310_alignment_1;Target=Contig1310 6 1171 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	26429	30795	34446	-	0	ID=Contig4_alignment_12;Target=Contig4 1 4385 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	30513	31449	5824	+	0	ID=Contig58_alignment_3;Target=Contig58 3218 4143 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	31204	37694	45332	-	0	ID=Contig4_alignment_13;Target=Contig4 2799 9291 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	37690	38746	6672	-	0	ID=Contig89_alignment_1;Target=Contig89 714 1770 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	38246	38746	2883	-	0	ID=Contig89_alignment_2;Target=Contig89 714 1213 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	38698	39275	3393	-	0	ID=Contig89_alignment_3;Target=Contig89 1 593 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	38698	39245	3288	-	0	ID=Contig89_alignment_4;Target=Contig89 31 593 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	39182	39763	3814	-	0	ID=Contig1261_alignment_1;Target=Contig1261 383 969 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	40109	41049	6470	+	0	ID=Contig732_alignment_1;Target=Contig732 284 1226 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	40454	42034	11373	-	0	ID=Contig128_alignment_1;Target=Contig128 371 1952 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	41873	42787	5916	+	0	ID=Contig946_alignment_1;Target=Contig946 1 916 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	42779	42983	1033	+	0	ID=Contig946_alignment_2;Target=Contig946 711 918 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	42973	43310	1244	+	0	ID=Contig946_alignment_3;Target=Contig946 711 1062 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	43309	43670	1623	-	0	ID=Contig1364_alignment_1;Target=Contig1364 2300 2652 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	43663	43971	2348	-	0	ID=Contig358_alignment_1;Target=Contig358 3 311 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	43972	45183	6595	-	0	ID=Contig1364_alignment_2;Target=Contig1364 1132 2316 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	46017	46315	2425	-	0	ID=Contig1230_alignment_1;Target=Contig1230 1 299 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	47560	47611	331	-	0	ID=Contig915_alignment_1;Target=Contig915 241 292 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	50078	50841	4939	-	0	ID=Contig1152_alignment_1;Target=Contig1152 5085 5854 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	50821	59821	56683	-	0	ID=Contig1833_alignment_1;Target=Contig1833 156 9045 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	59813	60816	5498	-	0	ID=Contig1152_alignment_2;Target=Contig1152 4083 5089 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	60816	64526	20612	-	0	ID=Contig1152_alignment_3;Target=Contig1152 182 3900 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	64519	64843	1205	-	0	ID=Contig84_alignment_1;Target=Contig84 1636 1960 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	65682	65796	264	+	0	ID=Contig1252_alignment_1;Target=Contig1252 243 360 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	65726	65791	460	-	0	ID=Contig84_alignment_2;Target=Contig84 6329 6394 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	68228	68802	3426	+	0	ID=Contig1354_alignment_1;Target=Contig1354 13 613 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	68803	68934	840	+	0	ID=Contig1354_alignment_2;Target=Contig1354 486 616 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	68925	69108	579	-	0	ID=Contig1149_alignment_1;Target=Contig1149 358 542 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	69111	69548	2363	-	0	ID=Contig75_alignment_1;Target=Contig75 1 420 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	69834	69977	712	-	0	ID=Contig81_alignment_1;Target=Contig81 10 156 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	70023	70150	446	+	0	ID=Contig525_alignment_1;Target=Contig525 168 295 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	75684	75838	928	+	0	ID=Contig252_alignment_1;Target=Contig252 515 669 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	76395	76670	268	-	0	ID=Contig443_alignment_2;Target=Contig443 21 292 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	76474	77164	2390	+	0	ID=Contig443_alignment_3;Target=Contig443 130 803 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	76488	77401	2210	+	0	ID=Contig443_alignment_4;Target=Contig443 103 948 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	76493	77401	2239	+	0	ID=Contig443_alignment_5;Target=Contig443 107 948 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	76498	77164	2412	+	0	ID=Contig443_alignment_6;Target=Contig443 134 803 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	77901	78068	1262	-	0	ID=Contig764_alignment_1;Target=Contig764 1 178 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	79984	80037	274	+	0	ID=Contig915_alignment_2;Target=Contig915 241 294 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	79993	80058	231	+	0	ID=Contig1699_alignment_1;Target=Contig1699 41 108 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	81287	81585	2413	+	0	ID=Contig1230_alignment_2;Target=Contig1230 1 299 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	82859	82981	235	-	0	ID=Contig1276_alignment_1;Target=Contig1276 1099 1221 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	83114	83950	6938	+	0	ID=Contig1235_alignment_1;Target=Contig1235 1 849 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	83993	84075	288	+	0	ID=Contig49_alignment_1;Target=Contig49 1018 1100 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	84011	84096	266	+	0	ID=Contig33_alignment_1;Target=Contig33 3469 3556 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	84275	84396	315	+	0	ID=Contig33_alignment_2;Target=Contig33 3567 3699 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	85159	85514	1943	-	0	ID=Contig764_alignment_2;Target=Contig764 467 812 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	85510	85871	2680	-	0	ID=Contig764_alignment_3;Target=Contig764 162 515 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	85856	86144	2486	-	0	ID=Contig1230_alignment_3;Target=Contig1230 11 299 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	89844	90360	4041	+	0	ID=Contig764_alignment_4;Target=Contig764 1 519 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	90399	90691	1874	+	0	ID=Contig764_alignment_5;Target=Contig764 518 812 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	92785	92943	611	-	0	ID=Contig33_alignment_3;Target=Contig33 3468 3624 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	92879	92952	314	-	0	ID=Contig1378_alignment_1;Target=Contig1378 445 520 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	92897	92972	238	+	0	ID=Contig764_alignment_6;Target=Contig764 334 404 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	93657	93945	2006	-	0	ID=Contig764_alignment_7;Target=Contig764 518 812 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	94008	94524	4115	-	0	ID=Contig764_alignment_8;Target=Contig764 1 515 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	96493	96689	821	+	0	ID=Contig1203_alignment_1;Target=Contig1203 590 787 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	96644	96873	828	+	0	ID=Contig1203_alignment_2;Target=Contig1203 563 795 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	96821	97045	892	+	0	ID=Contig1203_alignment_3;Target=Contig1203 563 789 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	97030	97314	878	+	0	ID=Contig1203_alignment_4;Target=Contig1203 509 789 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	97207	97493	912	+	0	ID=Contig1203_alignment_5;Target=Contig1203 509 789 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	97447	97672	863	+	0	ID=Contig1203_alignment_6;Target=Contig1203 563 789 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	97568	97851	986	+	0	ID=Contig1203_alignment_7;Target=Contig1203 509 789 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	97721	97940	914	+	0	ID=Contig1203_alignment_8;Target=Contig1203 569 789 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	97900	98106	953	+	0	ID=Contig1203_alignment_9;Target=Contig1203 569 777 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	99931	100345	2399	+	0	ID=Contig1152_alignment_4;Target=Contig1152 5852 6254 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	100348	103384	17485	+	0	ID=Contig1152_alignment_5;Target=Contig1152 189 3230 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	103383	103873	2122	+	0	ID=Contig1152_alignment_6;Target=Contig1152 3515 4005 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	103765	103921	991	+	0	ID=Contig1152_alignment_7;Target=Contig1152 4058 4214 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	103908	103971	292	+	0	ID=Contig84_alignment_3;Target=Contig84 1941 2004 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	104584	104768	657	+	0	ID=Contig1149_alignment_2;Target=Contig1149 358 542 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	104759	104890	849	-	0	ID=Contig1354_alignment_3;Target=Contig1354 486 616 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	104891	105411	3342	-	0	ID=Contig1354_alignment_4;Target=Contig1354 92 613 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	105411	105886	2516	-	0	ID=Contig1275_alignment_1;Target=Contig1275 1 482 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	106241	106357	550	-	0	ID=Contig81_alignment_2;Target=Contig81 11 145 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	106367	106503	441	-	0	ID=Contig525_alignment_2;Target=Contig525 1 129 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	110769	110987	994	-	0	ID=Contig1202_alignment_1;Target=Contig1202 2 225 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	111701	111797	233	-	0	ID=Contig893_alignment_1;Target=Contig893 521 615 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	111738	111879	712	+	0	ID=Contig147_alignment_1;Target=Contig147 22 175 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	111923	112179	1212	+	0	ID=Contig457_alignment_1;Target=Contig457 3 264 +
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	112180	112414	1247	-	0	ID=Contig469_alignment_1;Target=Contig469 262 495 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	113277	113471	831	-	0	ID=Contig1203_alignment_10;Target=Contig1203 569 763 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	113342	114155	1301	-	0	ID=Contig1203_alignment_11;Target=Contig1203 1 789 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	113609	114377	2964	-	0	ID=Contig1203_alignment_12;Target=Contig1203 17 789 -
C12HBa0075C18.1	RepeatMasker	nucleotide_motif	113698	114377	3204	-	0	ID=Contig1203_alignment_13;Target=Contig1203 135 787 -