<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-04-07 19:51:29"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E342451" ref_strand="+" ref_description="SGN-E342451 [cTOF-8-I6]">
      <seq>atcggtccagttgctccagtcatgataagcaccgtcgggacgggtggcgttcgaataagcagctatctccggcttccgtacacggtggagaacacttctccgccgccgccgtctcttcacctcatgctctgcctcctctaccaaagagaaagttattgtcatttccggacctaccggtgccggaaaaagcaagctagcattagagctcgctaagcgaatcaatggcgaaatcatcagtgcagactctgtacaggtgtatcgagggcttgatgtcggttcagcaaagccttcctttgatgaacgaaaggaagtagtacatcatctggttgacatattgcatccatccgaagattattctgttggacaattttttgaggatgctaggcaaactaccagagatatccttgataggggccgtgttccaatagtcgcgggtggtactggattatatttgcgatggtttatttatgggaggccagatgttccaaaagcctctcgagagattgctgctgaagtcgactcagagcttgcaagtttacagaatgatgangactggaatgctgctgttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="1885" stop="4600"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2185" g_stop="2436" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2437" i_stop="2740" i_length="304">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2741" g_stop="2794" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="307" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2795" i_stop="3081" i_length="287">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3082" g_stop="3124" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="350" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3125" i_stop="3731" i_length="607">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3732" g_stop="3840" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="459" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3841" i_stop="4190" i_length="350">
            <donor d_prob="0.671" d_score="1.00"/>
            <acceptor a_prob="0.355" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4191" g_stop="4300" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="569" r_length="110" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E342451" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>568</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342451" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2185" e_stop="2436"/>
          <exon e_start="2741" e_stop="2794"/>
          <exon e_start="3082" e_stop="3124"/>
          <exon e_start="3732" e_stop="3840"/>
          <exon e_start="4191" e_stop="4300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCGGTCCAGTTGCTCCAGTCATGATAAGCACCGTCGGGACGGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTTCCGTACACGGTGGAG-ACACTTCTCCGCCGCCGCCGTCTCTTCACCTCATGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGAAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGACTCTGTACAGGTTATTACTTATCGAACCTCATAAATTGCTTCCGTTTGCTTAGTTAGAAAATTGAGATTGATAGTAAACAATTGAATAAAATTGAATTACCATAACTTGAACTTTAATGAAATAGCAAAGATTATCACAAGCTTGTTAATGTTGCTTAACTGAATGCAGTGGTGGAGCTAGGTAGGGTCGAGAAAATCACACTTCATTTTTATGTATATATAGTAGATGTGCAACCCGTATCATGGCTCTGCTACTGACTGAATGACGTTTGTTGAAATTCAGTTGATTTATGCTTTGTTCTCTCGCTTTACAGGTGTATCGAGGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACGAAAGGTATTACTTTAGCAAATTTGAATTATGTTTTGCTAATATTAGCATGTTTACCGCCTGGTTTTGTGAGGCATGCTTTTAACATGAAACATTTTTTGCCTTCTTTTGGTTTCGGCGTAATTTTTGGTTCTGTTGGTTTCATGTTTGGATGTACTGAGTGACTAACTTCTGGAGCTTCATTAAGTAACTTGTTTGTCCGTTTGAGGAATGGAAAATACTTCTTGAATGTTATAGAACCATGTGTTAGAGTACTGCCATGACAGACACTTATTTTGATGTATGTTCTGCAGGAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAGGTATTTCTTTCTAAATTAGAGGGTCTGAAGCATTGAAACAATATTTTGCATGAATTTCAATAGCTGTGCAGCTCATCCCTTCACTCAATGAAGCATGATCTGTTCCCTCTACATTGTCATAGATTGTAATTTGGTGCATATATTTGTTGGTATGTGCGTAGTGACAGTCATGACCTATAGAAGCCCTATGCTTTCCATATTTGTGGAACATCAGAACTTAAAATCAATGAAGGGAACACATCAAAATTCAGCAATTTGTCGAAACCCTCAAATTAACCATTTTATAGCCTATCACTTCACCTTTGTTTGTTATTGCTCAAGGCATTTTGCAATGTTTATACAAATCGTCGAGATTAGTGATATTTGTAACTTTAGACTAAATGACTAATACAACATTCCAAACTCCACTGTGATCAAGAGTCCTTTTTCTGGGGAACCTGTGCCAGTTGGGTGGGGTGGGGCTGTAATTTGAAGTTAAATTTCCTTCGTCTGATTTGCTCGTATAGTCATATTTAGTTAAACGTATGCCTATATGATGTACCCTTAAATTTGTTGTCCTTTTGTGCTAACACATTTTTTTCTCCTTTTCTTTTGGATATGTCATCAGATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATGGTATGTGTAGGATATACAGCTCACACTTGAAAGCTTCTGGTTTGATTGAGGAGCACATTTCAAAACTAAAGCTAAACTTTTTGGTTGCAACTTGTTCAACAAAGAAGATTCATTCTGTAAAACTACAGACTGTGAGAGAGCAAGAATGAGGATAAGTTTTGTTGAGAGATGTCTATTTACAAGCTTTATTATACTTAAAAATGAAGCTTACATATATCCTGTAACTGATAATAGAATTGGATCTTGGGTGTACAAGAATTCCTTTTTCATGCAGACTCTACAACTGAGTCACTTAACCTAAAGGGGCATGATCTTCCAACTCACATAATAAATTCTGTCCAACGTTTAAGGTTTATTTATGGGAGGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAATGATGAGGACTGGAATGCTGCTGTTC</genome_strand>
        <mrna_strand>ATCGGTCCAGTTGCTCCAGTCATGATAAGCACCGTCGGGACGGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTTCCGTACACGGTGGAGAACACTTCTCCGCCGCCGCCGTCTCTTCACCTCATGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGAAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGACTCTGTACAG................................................................................................................................................................................................................................................................................................................GTGTATCGAGGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACGAAAG...............................................................................................................................................................................................................................................................................................GAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATG..............................................................................................................................................................................................................................................................................................................................................................GTTTATTTATGGGAGGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAATGATGANGACTGGAATGCTGCTGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E412081" ref_strand="+" ref_description="SGN-E412081 [STM-15-P17]">
      <seq>gtcatgataagcaccatcgggactggtggcgttcgaatatgcagctatctccggcttccgtacacggtggagacacttctccgccgccgttgccgtctcttcaccacctgctctgcctcctctaccaaagagaaagttattgtcatctccggacctaccggtgccggtaaaagcaagctagcattagagcttgctaagcgactcaatggtgaaatcatcagcgcggactctgtacaggtgtatcgagggcttgatgtcggttcagcgaagccttcctttgatgaacgaaaggaagtagtacatcatctggttgacatattgcatccatccgaagattattctgttggacaattttttgaggatgctaggcaaactactagagatatccttgataggggccgtgttccaatagtcgcgggtggtactggattatatttgcgatggtttatttatgggaagccagatgttccaaaagcctctcgagagattgctgctgaagttgactcagagcttgcaagtttacagaatgatgaagagtggaatgctgctgttcagttgttggttaaagctggtgatcctggtgcccagtctttactggcaaatgattggtatcgcttgcgtcgcaggcttgaaattgtaagtctactgggtcaccttcatcagcttttgaagtaccatatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="1903" stop="5052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2203" g_stop="2436" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2437" i_stop="2740" i_length="304">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2741" g_stop="2794" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="291" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2795" i_stop="3081" i_length="287">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3082" g_stop="3124" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="334" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3125" i_stop="3731" i_length="607">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3732" g_stop="3840" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="443" r_length="109" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3841" i_stop="4190" i_length="350">
            <donor d_prob="0.671" d_score="1.00"/>
            <acceptor a_prob="0.355" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4191" g_stop="4389" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="641" r_length="198" r_score="0.965"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4390" i_stop="4710" i_length="321">
            <donor d_prob="0.992" d_score="0.96"/>
            <acceptor a_prob="0.992" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="4711" g_stop="4752" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="683" r_length="42" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E412081" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>681</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412081" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2203" e_stop="2436"/>
          <exon e_start="2741" e_stop="2794"/>
          <exon e_start="3082" e_stop="3124"/>
          <exon e_start="3732" e_stop="3840"/>
          <exon e_start="4191" e_stop="4389"/>
          <exon e_start="4711" e_stop="4752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATGATAAGCACCGTCGGGACGGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTTCCGTACACGGTGGAGACACTTCTCCGCCGCC---GCCGTCTCTTCACCTCATGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGAAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGACTCTGTACAGGTTATTACTTATCGAACCTCATAAATTGCTTCCGTTTGCTTAGTTAGAAAATTGAGATTGATAGTAAACAATTGAATAAAATTGAATTACCATAACTTGAACTTTAATGAAATAGCAAAGATTATCACAAGCTTGTTAATGTTGCTTAACTGAATGCAGTGGTGGAGCTAGGTAGGGTCGAGAAAATCACACTTCATTTTTATGTATATATAGTAGATGTGCAACCCGTATCATGGCTCTGCTACTGACTGAATGACGTTTGTTGAAATTCAGTTGATTTATGCTTTGTTCTCTCGCTTTACAGGTGTATCGAGGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACGAAAGGTATTACTTTAGCAAATTTGAATTATGTTTTGCTAATATTAGCATGTTTACCGCCTGGTTTTGTGAGGCATGCTTTTAACATGAAACATTTTTTGCCTTCTTTTGGTTTCGGCGTAATTTTTGGTTCTGTTGGTTTCATGTTTGGATGTACTGAGTGACTAACTTCTGGAGCTTCATTAAGTAACTTGTTTGTCCGTTTGAGGAATGGAAAATACTTCTTGAATGTTATAGAACCATGTGTTAGAGTACTGCCATGACAGACACTTATTTTGATGTATGTTCTGCAGGAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAGGTATTTCTTTCTAAATTAGAGGGTCTGAAGCATTGAAACAATATTTTGCATGAATTTCAATAGCTGTGCAGCTCATCCCTTCACTCAATGAAGCATGATCTGTTCCCTCTACATTGTCATAGATTGTAATTTGGTGCATATATTTGTTGGTATGTGCGTAGTGACAGTCATGACCTATAGAAGCCCTATGCTTTCCATATTTGTGGAACATCAGAACTTAAAATCAATGAAGGGAACACATCAAAATTCAGCAATTTGTCGAAACCCTCAAATTAACCATTTTATAGCCTATCACTTCACCTTTGTTTGTTATTGCTCAAGGCATTTTGCAATGTTTATACAAATCGTCGAGATTAGTGATATTTGTAACTTTAGACTAAATGACTAATACAACATTCCAAACTCCACTGTGATCAAGAGTCCTTTTTCTGGGGAACCTGTGCCAGTTGGGTGGGGTGGGGCTGTAATTTGAAGTTAAATTTCCTTCGTCTGATTTGCTCGTATAGTCATATTTAGTTAAACGTATGCCTATATGATGTACCCTTAAATTTGTTGTCCTTTTGTGCTAACACATTTTTTTCTCCTTTTCTTTTGGATATGTCATCAGATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATGGTATGTGTAGGATATACAGCTCACACTTGAAAGCTTCTGGTTTGATTGAGGAGCACATTTCAAAACTAAAGCTAAACTTTTTGGTTGCAACTTGTTCAACAAAGAAGATTCATTCTGTAAAACTACAGACTGTGAGAGAGCAAGAATGAGGATAAGTTTTGTTGAGAGATGTCTATTTACAAGCTTTATTATACTTAAAAATGAAGCTTACATATATCCTGTAACTGATAATAGAATTGGATCTTGGGTGTACAAGAATTCCTTTTTCATGCAGACTCTACAACTGAGTCACTTAACCTAAAGGGGCATGATCTTCCAACTCACATAATAAATTCTGTCCAACGTTTAAGGTTTATTTATGGGAGGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAATGATGAGGACTGGAATGCTGCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCCGGTGCCCAGTCTTTACCGGCAAATGATTGGTATCGCTTGCGTCGCAGGCTTGAAATTGTTAAGGTAAAATTGTGAAACTTTCATGTGTGATCGTCTGATTTTAACCCCTTCTTTGTAAGCTTGATCACATGTTGTATGAGTTAGGTTGACATTAGAGGTTTCTGTGTTATTTTTTGTCACTTCCCGATGTGATTGAGGGATCCTGTGTTTCCTGTCAACTCTTGATGTACTTGTATAGAGAACTTGTATTGGTTTCATAAGAGCTCTTTGGGGTTATGGAATAGTTGAGACTGGATTGAGATGTGCCCAACTGTTAGTCCATGTTGTCGCAGCCTGTTCAATTCATCTTTAGATGAAAAAACTAAATACATTTTTGTCTTGCAGTCTACTGGGTCGCCTCCATCAGCTTTTGAAGTACCATATAAT</genome_strand>
        <mrna_strand>GTCATGATAAGCACCATCGGGACTGGTGGCGTTCGAATATGCAGCTATCTCCGGCTTCCGTACACGGTGGAGACACTTCTCCGCCGCCGTTGCCGTCTCTTCACCACCTGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATCTCCGGACCTACCGGTGCCGGTAAAAGCAAGCTAGCATTAGAGCTTGCTAAGCGACTCAATGGTGAAATCATCAGCGCGGACTCTGTACAG................................................................................................................................................................................................................................................................................................................GTGTATCGAGGGCTTGATGTCGGTTCAGCGAAGCCTTCCTTTGATGAACGAAAG...............................................................................................................................................................................................................................................................................................GAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACTAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATG..............................................................................................................................................................................................................................................................................................................................................................GTTTATTTATGGGAAGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTTGACTCAGAGCTTGCAAGTTTACAGAATGATGAAGAGTGGAATGCTGCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCTGGTGCCCAGTCTTTACTGGCAAATGATTGGTATCGCTTGCGTCGCAGGCTTGAAATTG-TAAG.................................................................................................................................................................................................................................................................................................................................TCTACTGGGTCACCTTCATCAGCTTTTGAAGTACCATATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E470027" ref_strand="+" ref_description="SGN-E470027 [cSTB-16-B20]">
      <seq>gtcatgataagcaccatcgggactggtggcgttcgaatatgcagctatctccggcttccgtacacggtggagacacttctccgccgccgttgccgtctcttcaccacctgctctgcctcctctaccaaagagaaagttattgtcatctccggacctaccggtgccggtaaaagcaagctagcattagagcttgctaagcgactcaatggtgaaatcatcagcgcggactctgtacaggtgtatcgagggcttgatgtcggttcagcgaagccttcctttgatgaacgaaaggaagtagtacatcatctggttgacatattgcatccatccgaagattattctgttggacaattttttgaggatgctaggcaaactactagagatatccttgataggggccgtgttccaatagtcgcgggtggtactggattatatttgcgatggtttatttatgggaagccagatgttccaaaagcctctcgagagattgctgctgaagttgactcanagcttgcaagtttacagaatgatgaagagtggaatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="1903" stop="4593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2203" g_stop="2436" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2437" i_stop="2740" i_length="304">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2741" g_stop="2794" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="291" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2795" i_stop="3081" i_length="287">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3082" g_stop="3124" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="334" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3125" i_stop="3731" i_length="607">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3732" g_stop="3840" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="443" r_length="109" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3841" i_stop="4190" i_length="350">
            <donor d_prob="0.671" d_score="1.00"/>
            <acceptor a_prob="0.355" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4191" g_stop="4293" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="444" r_stop="546" r_length="103" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E470027" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E470027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2203" e_stop="2436"/>
          <exon e_start="2741" e_stop="2794"/>
          <exon e_start="3082" e_stop="3124"/>
          <exon e_start="3732" e_stop="3840"/>
          <exon e_start="4191" e_stop="4293"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCATGATAAGCACCGTCGGGACGGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTTCCGTACACGGTGGAGACACTTCTCCGCCGCC---GCCGTCTCTTCACCTCATGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGAAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGACTCTGTACAGGTTATTACTTATCGAACCTCATAAATTGCTTCCGTTTGCTTAGTTAGAAAATTGAGATTGATAGTAAACAATTGAATAAAATTGAATTACCATAACTTGAACTTTAATGAAATAGCAAAGATTATCACAAGCTTGTTAATGTTGCTTAACTGAATGCAGTGGTGGAGCTAGGTAGGGTCGAGAAAATCACACTTCATTTTTATGTATATATAGTAGATGTGCAACCCGTATCATGGCTCTGCTACTGACTGAATGACGTTTGTTGAAATTCAGTTGATTTATGCTTTGTTCTCTCGCTTTACAGGTGTATCGAGGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACGAAAGGTATTACTTTAGCAAATTTGAATTATGTTTTGCTAATATTAGCATGTTTACCGCCTGGTTTTGTGAGGCATGCTTTTAACATGAAACATTTTTTGCCTTCTTTTGGTTTCGGCGTAATTTTTGGTTCTGTTGGTTTCATGTTTGGATGTACTGAGTGACTAACTTCTGGAGCTTCATTAAGTAACTTGTTTGTCCGTTTGAGGAATGGAAAATACTTCTTGAATGTTATAGAACCATGTGTTAGAGTACTGCCATGACAGACACTTATTTTGATGTATGTTCTGCAGGAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAGGTATTTCTTTCTAAATTAGAGGGTCTGAAGCATTGAAACAATATTTTGCATGAATTTCAATAGCTGTGCAGCTCATCCCTTCACTCAATGAAGCATGATCTGTTCCCTCTACATTGTCATAGATTGTAATTTGGTGCATATATTTGTTGGTATGTGCGTAGTGACAGTCATGACCTATAGAAGCCCTATGCTTTCCATATTTGTGGAACATCAGAACTTAAAATCAATGAAGGGAACACATCAAAATTCAGCAATTTGTCGAAACCCTCAAATTAACCATTTTATAGCCTATCACTTCACCTTTGTTTGTTATTGCTCAAGGCATTTTGCAATGTTTATACAAATCGTCGAGATTAGTGATATTTGTAACTTTAGACTAAATGACTAATACAACATTCCAAACTCCACTGTGATCAAGAGTCCTTTTTCTGGGGAACCTGTGCCAGTTGGGTGGGGTGGGGCTGTAATTTGAAGTTAAATTTCCTTCGTCTGATTTGCTCGTATAGTCATATTTAGTTAAACGTATGCCTATATGATGTACCCTTAAATTTGTTGTCCTTTTGTGCTAACACATTTTTTTCTCCTTTTCTTTTGGATATGTCATCAGATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATGGTATGTGTAGGATATACAGCTCACACTTGAAAGCTTCTGGTTTGATTGAGGAGCACATTTCAAAACTAAAGCTAAACTTTTTGGTTGCAACTTGTTCAACAAAGAAGATTCATTCTGTAAAACTACAGACTGTGAGAGAGCAAGAATGAGGATAAGTTTTGTTGAGAGATGTCTATTTACAAGCTTTATTATACTTAAAAATGAAGCTTACATATATCCTGTAACTGATAATAGAATTGGATCTTGGGTGTACAAGAATTCCTTTTTCATGCAGACTCTACAACTGAGTCACTTAACCTAAAGGGGCATGATCTTCCAACTCACATAATAAATTCTGTCCAACGTTTAAGGTTTATTTATGGGAGGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAATGATGAGGACTGGAATGCT</genome_strand>
        <mrna_strand>GTCATGATAAGCACCATCGGGACTGGTGGCGTTCGAATATGCAGCTATCTCCGGCTTCCGTACACGGTGGAGACACTTCTCCGCCGCCGTTGCCGTCTCTTCACCACCTGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATCTCCGGACCTACCGGTGCCGGTAAAAGCAAGCTAGCATTAGAGCTTGCTAAGCGACTCAATGGTGAAATCATCAGCGCGGACTCTGTACAG................................................................................................................................................................................................................................................................................................................GTGTATCGAGGGCTTGATGTCGGTTCAGCGAAGCCTTCCTTTGATGAACGAAAG...............................................................................................................................................................................................................................................................................................GAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACTAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATG..............................................................................................................................................................................................................................................................................................................................................................GTTTATTTATGGGAAGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTTGACTCANAGCTTGCAAGTTTACAGAATGATGAAGAGTGGAATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E448482" ref_strand="+" ref_description="SGN-E448482 [cSTS-3-G18]">
      <seq>gtcgggactggtggcgttcgaataagcagctatctccggctgccgtacacggtggagacacttctccgccgccgttgccgtctcttcacctcctgctctgcctcctctactaaggagaaagttattgtcatttccggacctaccggtgccggtaaaagcaagctagcattagagctcgctaagcgactcaatggtgaaatcatcagcgcggactctgtacaggtgtatcgagggcttgatgtcggttcagcgaagccttcctttgatgaacgaaaggaagtagtacatcatctggttgacatattgcatccatccgaagattattctgttggacaattttttgaggatgctaggcaaactaccagagatatccttgataggggccatgttccaatagtcgcgggtggtactggattatatttgcgatggtttatttatggaaagccagatgttccaaaagcctctcgagagattgctgctgaagttgactcagagcttgcaagtttacagaatgatgaagagtggaatgctgctgttcagttgttggttaaagctggtgatcctggtgcccagtctttaccggcaaatgattggtatcgcttgcgtcgcaggcttgaaattgttaagtctactgggtcacctncatcagcttttgaagtaccatatgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="1918" stop="5053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2218" g_stop="2436" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2437" i_stop="2740" i_length="304">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2741" g_stop="2794" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="276" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2795" i_stop="3081" i_length="287">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3082" g_stop="3124" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="319" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3125" i_stop="3731" i_length="607">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3732" g_stop="3840" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="428" r_length="109" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3841" i_stop="4190" i_length="350">
            <donor d_prob="0.671" d_score="0.98"/>
            <acceptor a_prob="0.355" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4191" g_stop="4389" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="627" r_length="199" r_score="0.970"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4390" i_stop="4710" i_length="321">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.93"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="4711" g_stop="4753" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="670" r_length="43" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E448482" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2218" e_stop="2436"/>
          <exon e_start="2741" e_stop="2794"/>
          <exon e_start="3082" e_stop="3124"/>
          <exon e_start="3732" e_stop="3840"/>
          <exon e_start="4191" e_stop="4389"/>
          <exon e_start="4711" e_stop="4753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGGGACGGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTTCCGTACACGGTGGAGACACTTCTCCGCCGCC---GCCGTCTCTTCACCTCATGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGAAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGACTCTGTACAGGTTATTACTTATCGAACCTCATAAATTGCTTCCGTTTGCTTAGTTAGAAAATTGAGATTGATAGTAAACAATTGAATAAAATTGAATTACCATAACTTGAACTTTAATGAAATAGCAAAGATTATCACAAGCTTGTTAATGTTGCTTAACTGAATGCAGTGGTGGAGCTAGGTAGGGTCGAGAAAATCACACTTCATTTTTATGTATATATAGTAGATGTGCAACCCGTATCATGGCTCTGCTACTGACTGAATGACGTTTGTTGAAATTCAGTTGATTTATGCTTTGTTCTCTCGCTTTACAGGTGTATCGAGGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACGAAAGGTATTACTTTAGCAAATTTGAATTATGTTTTGCTAATATTAGCATGTTTACCGCCTGGTTTTGTGAGGCATGCTTTTAACATGAAACATTTTTTGCCTTCTTTTGGTTTCGGCGTAATTTTTGGTTCTGTTGGTTTCATGTTTGGATGTACTGAGTGACTAACTTCTGGAGCTTCATTAAGTAACTTGTTTGTCCGTTTGAGGAATGGAAAATACTTCTTGAATGTTATAGAACCATGTGTTAGAGTACTGCCATGACAGACACTTATTTTGATGTATGTTCTGCAGGAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAGGTATTTCTTTCTAAATTAGAGGGTCTGAAGCATTGAAACAATATTTTGCATGAATTTCAATAGCTGTGCAGCTCATCCCTTCACTCAATGAAGCATGATCTGTTCCCTCTACATTGTCATAGATTGTAATTTGGTGCATATATTTGTTGGTATGTGCGTAGTGACAGTCATGACCTATAGAAGCCCTATGCTTTCCATATTTGTGGAACATCAGAACTTAAAATCAATGAAGGGAACACATCAAAATTCAGCAATTTGTCGAAACCCTCAAATTAACCATTTTATAGCCTATCACTTCACCTTTGTTTGTTATTGCTCAAGGCATTTTGCAATGTTTATACAAATCGTCGAGATTAGTGATATTTGTAACTTTAGACTAAATGACTAATACAACATTCCAAACTCCACTGTGATCAAGAGTCCTTTTTCTGGGGAACCTGTGCCAGTTGGGTGGGGTGGGGCTGTAATTTGAAGTTAAATTTCCTTCGTCTGATTTGCTCGTATAGTCATATTTAGTTAAACGTATGCCTATATGATGTACCCTTAAATTTGTTGTCCTTTTGTGCTAACACATTTTTTTCTCCTTTTCTTTTGGATATGTCATCAGATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATGGTATGTGTAGGATATACAGCTCACACTTGAAAGCTTCTGGTTTGATTGAGGAGCACATTTCAAAACTAAAGCTAAACTTTTTGGTTGCAACTTGTTCAACAAAGAAGATTCATTCTGTAAAACTACAGACTGTGAGAGAGCAAGAATGAGGATAAGTTTTGTTGAGAGATGTCTATTTACAAGCTTTATTATACTTAAAAATGAAGCTTACATATATCCTGTAACTGATAATAGAATTGGATCTTGGGTGTACAAGAATTCCTTTTTCATGCAGACTCTACAACTGAGTCACTTAACCTAAAGGGGCATGATCTTCCAACTCACATAATAAATTCTGTCCAACGTTTAAGGTTTATTTATGGGAGGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAATGATGAGGACTGGAATGCTGCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCCGGTGCCCAGTCTTTACCGGCAAATGATTGGTATCGCTTGCGTCGCAGGCTTGAAATTGTTAAGGTAAAATTGTGAAACTTTCATGTGTGATCGTCTGATTTTAACCCCTTCTTTGTAAGCTTGATCACATGTTGTATGAGTTAGGTTGACATTAGAGGTTTCTGTGTTATTTTTTGTCACTTCCCGATGTGATTGAGGGATCCTGTGTTTCCTGTCAACTCTTGATGTACTTGTATAGAGAACTTGTATTGGTTTCATAAGAGCTCTTTGGGGTTATGGAATAGTTGAGACTGGATTGAGATGTGCCCAACTGTTAGTCCATGTTGTCGCAGCCTGTTCAATTCATCTTTAGATGAAAAAACTAAATACATTTTTGTCTTGCAGTCTACTGGGTCGCCTCCATCAGCTTTTGAAGTACCATATAATT</genome_strand>
        <mrna_strand>GTCGGGACTGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTGCCGTACACGGTGGAGACACTTCTCCGCCGCCGTTGCCGTCTCTTCACCTCCTGCTCTGCCTCCTCTACTAAGGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGTAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGACTCAATGGTGAAATCATCAGCGCGGACTCTGTACAG................................................................................................................................................................................................................................................................................................................GTGTATCGAGGGCTTGATGTCGGTTCAGCGAAGCCTTCCTTTGATGAACGAAAG...............................................................................................................................................................................................................................................................................................GAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCATGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATG..............................................................................................................................................................................................................................................................................................................................................................GTTTATTTATGGAAAGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTTGACTCAGAGCTTGCAAGTTTACAGAATGATGAAGAGTGGAATGCTGCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCTGGTGCCCAGTCTTTACCGGCAAATGATTGGTATCGCTTGCGTCGCAGGCTTGAAATTGTTAAG.................................................................................................................................................................................................................................................................................................................................TCTACTGGGTCACCTNCATCAGCTTTTGAAGTACCATATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E448642" ref_strand="+" ref_description="SGN-E448642 [cSTS-3-F10]">
      <seq>gtcgggactggtggcgttcgaataagcagctatctccggctgccgtacacggtggagacacttctccgccgccgttgccgtctcttcacctcctgctctgcctcctctactaaggagaaagttattgtcatttccggacctaccggtgccggtaaaagcaagctagcattagagctcgctaagcgactcaatggtgaaatcatcagcgcggactctgtacaggtgtatcgagggcttgatgtcggttcagcgaagccttcctttgatgaacgaaaggaagtagtacatcatctggttgacatattgcatccatccgaagattattctgttggacaattttttgaggatgctaggcaaactaccagagatatccttgataggggccatgttccaatagtcgcgggtggtactggattatatttgcgatggtttatttatggaaagccagatgttccaaaagcctctcgagagattgctgctgaagttgactcagagcttgcaagtttacagaatgatgaagagtggaatgctgctgttcagttgttggttaaagctggtgatcctggtgcccagtctttaccggcaaatgattggtatcgcttgcgtcgcaggcttgaaattggtaagtctactgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="1918" stop="4698"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2218" g_stop="2436" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2437" i_stop="2740" i_length="304">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2741" g_stop="2794" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="276" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2795" i_stop="3081" i_length="287">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3082" g_stop="3124" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="319" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3125" i_stop="3731" i_length="607">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3732" g_stop="3840" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="428" r_length="109" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3841" i_stop="4190" i_length="350">
            <donor d_prob="0.671" d_score="0.98"/>
            <acceptor a_prob="0.355" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4191" g_stop="4389" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="627" r_length="199" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E448642" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E448642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2218" e_stop="2436"/>
          <exon e_start="2741" e_stop="2794"/>
          <exon e_start="3082" e_stop="3124"/>
          <exon e_start="3732" e_stop="3840"/>
          <exon e_start="4191" e_stop="4389"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGGGACGGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTTCCGTACACGGTGGAGACACTTCTCCGCCGCC---GCCGTCTCTTCACCTCATGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGAAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGACTCTGTACAGGTTATTACTTATCGAACCTCATAAATTGCTTCCGTTTGCTTAGTTAGAAAATTGAGATTGATAGTAAACAATTGAATAAAATTGAATTACCATAACTTGAACTTTAATGAAATAGCAAAGATTATCACAAGCTTGTTAATGTTGCTTAACTGAATGCAGTGGTGGAGCTAGGTAGGGTCGAGAAAATCACACTTCATTTTTATGTATATATAGTAGATGTGCAACCCGTATCATGGCTCTGCTACTGACTGAATGACGTTTGTTGAAATTCAGTTGATTTATGCTTTGTTCTCTCGCTTTACAGGTGTATCGAGGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACGAAAGGTATTACTTTAGCAAATTTGAATTATGTTTTGCTAATATTAGCATGTTTACCGCCTGGTTTTGTGAGGCATGCTTTTAACATGAAACATTTTTTGCCTTCTTTTGGTTTCGGCGTAATTTTTGGTTCTGTTGGTTTCATGTTTGGATGTACTGAGTGACTAACTTCTGGAGCTTCATTAAGTAACTTGTTTGTCCGTTTGAGGAATGGAAAATACTTCTTGAATGTTATAGAACCATGTGTTAGAGTACTGCCATGACAGACACTTATTTTGATGTATGTTCTGCAGGAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAGGTATTTCTTTCTAAATTAGAGGGTCTGAAGCATTGAAACAATATTTTGCATGAATTTCAATAGCTGTGCAGCTCATCCCTTCACTCAATGAAGCATGATCTGTTCCCTCTACATTGTCATAGATTGTAATTTGGTGCATATATTTGTTGGTATGTGCGTAGTGACAGTCATGACCTATAGAAGCCCTATGCTTTCCATATTTGTGGAACATCAGAACTTAAAATCAATGAAGGGAACACATCAAAATTCAGCAATTTGTCGAAACCCTCAAATTAACCATTTTATAGCCTATCACTTCACCTTTGTTTGTTATTGCTCAAGGCATTTTGCAATGTTTATACAAATCGTCGAGATTAGTGATATTTGTAACTTTAGACTAAATGACTAATACAACATTCCAAACTCCACTGTGATCAAGAGTCCTTTTTCTGGGGAACCTGTGCCAGTTGGGTGGGGTGGGGCTGTAATTTGAAGTTAAATTTCCTTCGTCTGATTTGCTCGTATAGTCATATTTAGTTAAACGTATGCCTATATGATGTACCCTTAAATTTGTTGTCCTTTTGTGCTAACACATTTTTTTCTCCTTTTCTTTTGGATATGTCATCAGATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATGGTATGTGTAGGATATACAGCTCACACTTGAAAGCTTCTGGTTTGATTGAGGAGCACATTTCAAAACTAAAGCTAAACTTTTTGGTTGCAACTTGTTCAACAAAGAAGATTCATTCTGTAAAACTACAGACTGTGAGAGAGCAAGAATGAGGATAAGTTTTGTTGAGAGATGTCTATTTACAAGCTTTATTATACTTAAAAATGAAGCTTACATATATCCTGTAACTGATAATAGAATTGGATCTTGGGTGTACAAGAATTCCTTTTTCATGCAGACTCTACAACTGAGTCACTTAACCTAAAGGGGCATGATCTTCCAACTCACATAATAAATTCTGTCCAACGTTTAAGGTTTATTTATGGGAGGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAATGATGAGGACTGGAATGCTGCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCCGGTGCCCAGTCTTTACCGGCAAATGATTGGTATCGCTTGCGTCGCAGGCTTGAAATTGTTAAG</genome_strand>
        <mrna_strand>GTCGGGACTGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTGCCGTACACGGTGGAGACACTTCTCCGCCGCCGTTGCCGTCTCTTCACCTCCTGCTCTGCCTCCTCTACTAAGGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGTAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGACTCAATGGTGAAATCATCAGCGCGGACTCTGTACAG................................................................................................................................................................................................................................................................................................................GTGTATCGAGGGCTTGATGTCGGTTCAGCGAAGCCTTCCTTTGATGAACGAAAG...............................................................................................................................................................................................................................................................................................GAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCATGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATG..............................................................................................................................................................................................................................................................................................................................................................GTTTATTTATGGAAAGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTTGACTCAGAGCTTGCAAGTTTACAGAATGATGAAGAGTGGAATGCTGCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCTGGTGCCCAGTCTTTACCGGCAAATGATTGGTATCGCTTGCGTCGCAGGCTTGAAATTGGTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E268816" ref_strand="+" ref_description="SGN-E268816 [cLEM-4-N11]">
      <seq>gattatgattttctttgttatttcctttccaccagtaggatagatctctatagatcaattgattgtcggtgtgaagatatgctcttaggagcagatggaattctatctgaagccaggtggcttcttgatgtgggtcttttgccgaactcgaattttgctagtcgggcaattggtgaccgacaagcaatggaataccttctaaggtgtagggaagatggaggatggagttctgctggggacttccatgattttttatctgaatttcagaaagaatcacgttacttttcaagatgagaaaagagcagtatggatgattgtggatgcaaaagtgaggaacttctgatagtgctgcctaaattggtcaacccttactcctgtctgggctctggtcccttccatacatttggaaattttgcaaaaaggcagatgacatggtttcgcaatgaacagatttatgagtggatagatgcttctaaacctttggaaaaggttcttagcttcatatgtgattcatataacagtcaggatggccatctccagatgcccgagtcacttcgtatgcggaaagatataagaaatcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="4546" stop="8327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4846" g_stop="4933" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4934" i_stop="5541" i_length="608">
            <donor d_prob="0.944" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5542" g_stop="5636" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="183" r_length="95" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5637" i_stop="5712" i_length="76">
            <donor d_prob="0.960" d_score="0.94"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5713" g_stop="5807" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="278" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5808" i_stop="6652" i_length="845">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.175" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6653" g_stop="6781" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="407" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="6782" i_stop="7147" i_length="366">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7148" g_stop="7223" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="483" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="7224" i_stop="7927" i_length="704">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.655" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="7928" g_stop="8027" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="583" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E268816" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268816" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4846" e_stop="4933"/>
          <exon e_start="5542" e_stop="5636"/>
          <exon e_start="5713" e_stop="5807"/>
          <exon e_start="6653" e_stop="6781"/>
          <exon e_start="7148" e_stop="7223"/>
          <exon e_start="7928" e_stop="8027"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTATGATTTTCTTTGTTATTTCCTTTCCACCAGTAGGATAGATCTCTATAGATCAATTGATTTTCGGTGTGAAGATATGCTCTTAGGTAAAAGATAAATGAAATTTTTATAATTATTTGCTTTATTTAATATTTTTTTAAGGTCTTAGAATTCTTAATCAGAGCCTCATCCATTATTCACAAGCCTTCTAGGGAGAACATTCTTTTGCCTTAAGATTTTTGCGGTTATCATGATACCTAAGACTAATTATCTGCTTCTCTTCCTTCCTCCCTTCCTGCCCTTCTTCGTTTCATAATATTTTGACAAGACTGGAGGATTTTTTTCTCACATTTTGGAAAGATTAGATGTAGTAATTTGATCCTTTCTTTTTCTTTGTTCATAGTTTTCTTGTCATCTAAGGATATGTATTTCAGATAAGTTTCTTCTGAATAACTGGAGAAGCATTTTCTTTGGAAATTGGATAGTGAAATGTGAGCAATTTAAATAAGTACCAGTGATCATTTTGTTAATAAAGGTTAATTCTTCTTCCAAGAGTTAACCAGTGTGCTTTAAATTTGTAGTCCTTGAGATACTAATCGTTGCTTCAACTAAATAAATCTTTCTTTTAAATAAGAGCTTTCCATTTTAGTTCCTTAACAACTTTTTTTAGAATACCTTGATCCTAATTAATTCATTATGATGTTGGATACTGCAGGAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAAGTATATTTGCATCCCTATAGCTTGAACACAGTCCAATAGTTTGGTTACTAATATGTGTTTGTTCAAAATCTTTTAGGCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACGGTATTTTACTTTCACTGTGACTATGTAGTTGTCTCAAATTGTGATGATCTTAGTTGTTCTTGGTTTCTTGTATAGAAGATATGGATGTCGGGAAAACGACTGTCTTATTGTGTAATATAATATAATTTTTCAAAATGTTATCTTTCAATAAAATGGCCTTTTAGTATGAACCATTAAGGCCCCCTTGATTGAAATGTGTTTGATCTAACGGAAATTATTTTATTGAAAATATTTCCGGGGAAATGTTTTTCAGTGGAAGATTATTTTCCCAGAAAATGTTTTCTCGTGTTTGGTTGGTGAGTGAAAAATTATATTTGGAAATATACATACCAAAGACAATATTTTTAGGAAATTGGATAGTGTTTTACCAAAATTTGAGTAATAAAGATTAATAATTATGTCTAAGTGTTGGTTGGAGCAATTGATATGGAATTAATAGTCAACATAGTTATAACGAAAATGGCTTTCGTCCATAAGTGAGGGAGTTCATCCCGTCACCCCCCAGTAACCAAGCACTAGTGCATGACTTCCTCATGAAAATGTCTTTCTTAGAAAATAACTACTGTCATAAGTCATAACAAACACTTCCTCTATTATTTCACATATTAAGACAACCTTTCTTTCTTGACATTTAAATGTTGTATTTATCTGCTGTTTTTCTCTGTAGCGTCACAGTTTAGTTCTGGATGCTTATATGTTGTAGTCATTGTATGGATCAGCAAAAAGTTCCACAACTATTCCTGATAGAATTTTAATCATGTCTCCCCTGTCATTGTTGAAGACAACTTTCTACTTAACCCTCTCTTTCTTGTCTGCTGATCAAGCCACACTTCTTGATACTATAGTTACTTTTCAAGATGAGAAAAGAGCAGTATGGATGATTGTGGATGCAAAAGTGAGGAACTTCTGATAGTGCTGCCTAAATTGGTCAACCCTTACTCCTGTCTGGGCTCTGGTCCCTTCCATACATTTGGGTCTGGTCCATGCTTTTAGTGCTGGTTTTCCTGATTTGATTGGATCGTCTATAATACTATATCTTGGCAGTAGTATTAGAAATACTCTTGTAGTTTCTTGGCAGTAGTATTAGTAATATTCTCTTAGCGCTGGTTTTACAGTTCTTTCTTCTCTATGTTGCGTAATGCTCTCCATTTCACATTATTCCGTTGTTACTTTTCCCATATTGAAACTGCTGAAAATGTTTTTTAAATCCGGGTCTATCGGTAACATCATCTCTATTTCTACGAGGTAGGATTGGTTTCGTCTTGGTATGTTGTTGTTGTCTATAATGTTATTTCTTGCAAGTTATAAGCTGATTGACTGATTCTTATATTCTTGTGCAGAAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTGGTATGCCATTTCTGTTTTATAAGGAATTGTTGTGCCTTTTTTTTTTGTTATATAGAACTTTTATCAAGTTGGACATTTCTCTTCATTCCGGATGCAGTAGCTGAGTTCTGCTGGTCTATAAAAGTTGTTCACTGTTCCTTTTATTGACAGTATGATATTCATACAGTCATGCATGCATTATATATATGCGGATTTTTTCATCATCTCTTTGGGTATCCCATGGTTGGTATATTCTGTGTTGTGTCAGTCTGGATATGAAAGGTTGATTCTGGGAGGTTCAGAACAATAGTGGGTCCTTTTCTTAGCAATAATTACCTTAGTGTGGGAAGATTCTCTTTCAAATTGTTTACTTCTTTTTTTCATAGAGCTACAATCAGTTTCACGATGACCTCCTTTGGTTTTAGACGCTTATTCTTGCCTTGGGACTTCTCTTTTACCAAAAGCATGCCTTAAGGGAAAATATAGGCAGTGACAATCAATTGTAAGAAATAGCGATTCTTTGACTTGGAGTTGGCATGTGATAATTTTCAGTTTTTCTTTTTTCAAGGAACGTGGTTGTTTCATGTGCAGAGGCAGTCGTCTCTTCCCCTATGAAAAATTGTTTAATTGTTTAATCATACCTTTTATTGGGCCTTATCTCTCAGTAGCATGAGCCATGAAACACGTCAAATTCTCCTGTTGACATCTGAAACTGGCATTTACAGGAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACC</genome_strand>
        <mrna_strand>GATTATGATTTTCTTTGTTATTTCCTTTCCACCAGTAGGATAGATCTCTATAGATCAATTGATTGTCGGTGTGAAGATATGCTCTTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGATGGAATTCTATCTGAAGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTTTGCTAGTCGGGCAATTGGTGACCGACAA............................................................................GCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTACTTTTCAAGATGAGAAAAGAGCAGTATGGATGATTGTGGATGCAAAAGTGAGGAACTTCTGATAGTGCTGCCTAAATTGGTCAACCCTTACTCCTGTCTGGGCTCTGGTCCCTTCCATACATTTGG..............................................................................................................................................................................................................................................................................................................................................................................AAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E368381" ref_strand="+" ref_description="SGN-E368381 [TUS-23-J23]">
      <seq>tcaattgattttcggtgtgaagatatgctcttaggagcagatggaattctatctgaggccaggtggcttcttgatgtgggtcttttgccgaactcgaattctgctactcgggcaattggttaccgacaagcaatggaataccttctaaggtgtagggaagatggaggatggagttctgctggggacttccatgattttttatctgaatttcagaaagaatcacgaaattttgcaaaaaggcagatgacatggtttcgcaatgaacagatttatgagtggatagatgcttctaaacctttggaaaaggttcttagcttcatatgtgattcatataacagtcaggatggccatctccagatgcccgagtcacttcgtatgcggaaagatataagaaatcaccgtcaagctgcagtattgaagacctatcgtacaataaacaggcatttcattgggcatgaagattgtgtggatgttctggactggataaagaagatatatggccaacctactgactctctttgttaacgaacatctaagggactttgtctttcactttaagttgtcaaaatcaaaacatccaaaagttgttctcgttgttatcgaggttagctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="4600" stop="8613"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4900" g_stop="4933" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4934" i_stop="5541" i_length="608">
            <donor d_prob="0.944" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5542" g_stop="5636" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="129" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5637" i_stop="5712" i_length="76">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5713" g_stop="5807" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="224" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5808" i_stop="7147" i_length="1340">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7148" g_stop="7223" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="300" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7224" i_stop="7927" i_length="704">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.655" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7928" g_stop="8067" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="440" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8068" i_stop="8140" i_length="73">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8141" g_stop="8313" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="613" r_length="173" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E368381" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368381" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4900" e_stop="4933"/>
          <exon e_start="5542" e_stop="5636"/>
          <exon e_start="5713" e_stop="5807"/>
          <exon e_start="7148" e_stop="7223"/>
          <exon e_start="7928" e_stop="8067"/>
          <exon e_start="8141" e_stop="8313"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTGATTTTCGGTGTGAAGATATGCTCTTAGGTAAAAGATAAATGAAATTTTTATAATTATTTGCTTTATTTAATATTTTTTTAAGGTCTTAGAATTCTTAATCAGAGCCTCATCCATTATTCACAAGCCTTCTAGGGAGAACATTCTTTTGCCTTAAGATTTTTGCGGTTATCATGATACCTAAGACTAATTATCTGCTTCTCTTCCTTCCTCCCTTCCTGCCCTTCTTCGTTTCATAATATTTTGACAAGACTGGAGGATTTTTTTCTCACATTTTGGAAAGATTAGATGTAGTAATTTGATCCTTTCTTTTTCTTTGTTCATAGTTTTCTTGTCATCTAAGGATATGTATTTCAGATAAGTTTCTTCTGAATAACTGGAGAAGCATTTTCTTTGGAAATTGGATAGTGAAATGTGAGCAATTTAAATAAGTACCAGTGATCATTTTGTTAATAAAGGTTAATTCTTCTTCCAAGAGTTAACCAGTGTGCTTTAAATTTGTAGTCCTTGAGATACTAATCGTTGCTTCAACTAAATAAATCTTTCTTTTAAATAAGAGCTTTCCATTTTAGTTCCTTAACAACTTTTTTTAGAATACCTTGATCCTAATTAATTCATTATGATGTTGGATACTGCAGGAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAAGTATATTTGCATCCCTATAGCTTGAACACAGTCCAATAGTTTGGTTACTAATATGTGTTTGTTCAAAATCTTTTAGGCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACGGTATTTTACTTTCACTGTGACTATGTAGTTGTCTCAAATTGTGATGATCTTAGTTGTTCTTGGTTTCTTGTATAGAAGATATGGATGTCGGGAAAACGACTGTCTTATTGTGTAATATAATATAATTTTTCAAAATGTTATCTTTCAATAAAATGGCCTTTTAGTATGAACCATTAAGGCCCCCTTGATTGAAATGTGTTTGATCTAACGGAAATTATTTTATTGAAAATATTTCCGGGGAAATGTTTTTCAGTGGAAGATTATTTTCCCAGAAAATGTTTTCTCGTGTTTGGTTGGTGAGTGAAAAATTATATTTGGAAATATACATACCAAAGACAATATTTTTAGGAAATTGGATAGTGTTTTACCAAAATTTGAGTAATAAAGATTAATAATTATGTCTAAGTGTTGGTTGGAGCAATTGATATGGAATTAATAGTCAACATAGTTATAACGAAAATGGCTTTCGTCCATAAGTGAGGGAGTTCATCCCGTCACCCCCCAGTAACCAAGCACTAGTGCATGACTTCCTCATGAAAATGTCTTTCTTAGAAAATAACTACTGTCATAAGTCATAACAAACACTTCCTCTATTATTTCACATATTAAGACAACCTTTCTTTCTTGACATTTAAATGTTGTATTTATCTGCTGTTTTTCTCTGTAGCGTCACAGTTTAGTTCTGGATGCTTATATGTTGTAGTCATTGTATGGATCAGCAAAAAGTTCCACAACTATTCCTGATAGAATTTTAATCATGTCTCCCCTGTCATTGTTGAAGACAACTTTCTACTTAACCCTCTCTTTCTTGTCTGCTGATCAAGCCACACTTCTTGATACTATAGTTACTTTTCAAGATGAGAAAAGAGCAGTATGGATGATTGTGGATGCAAAAGTGAGGAACTTCTGATAGTGCTGCCTAAATTGGTCAACCCTTACTCCTGTCTGGGCTCTGGTCCCTTCCATACATTTGGGTCTGGTCCATGCTTTTAGTGCTGGTTTTCCTGATTTGATTGGATCGTCTATAATACTATATCTTGGCAGTAGTATTAGAAATACTCTTGTAGTTTCTTGGCAGTAGTATTAGTAATATTCTCTTAGCGCTGGTTTTACAGTTCTTTCTTCTCTATGTTGCGTAATGCTCTCCATTTCACATTATTCCGTTGTTACTTTTCCCATATTGAAACTGCTGAAAATGTTTTTTAAATCCGGGTCTATCGGTAACATCATCTCTATTTCTACGAGGTAGGATTGGTTTCGTCTTGGTATGTTGTTGTTGTCTATAATGTTATTTCTTGCAAGTTATAAGCTGATTGACTGATTCTTATATTCTTGTGCAGAAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTGGTATGCCATTTCTGTTTTATAAGGAATTGTTGTGCCTTTTTTTTTTGTTATATAGAACTTTTATCAAGTTGGACATTTCTCTTCATTCCGGATGCAGTAGCTGAGTTCTGCTGGTCTATAAAAGTTGTTCACTGTTCCTTTTATTGACAGTATGATATTCATACAGTCATGCATGCATTATATATATGCGGATTTTTTCATCATCTCTTTGGGTATCCCATGGTTGGTATATTCTGTGTTGTGTCAGTCTGGATATGAAAGGTTGATTCTGGGAGGTTCAGAACAATAGTGGGTCCTTTTCTTAGCAATAATTACCTTAGTGTGGGAAGATTCTCTTTCAAATTGTTTACTTCTTTTTTTCATAGAGCTACAATCAGTTTCACGATGACCTCCTTTGGTTTTAGACGCTTATTCTTGCCTTGGGACTTCTCTTTTACCAAAAGCATGCCTTAAGGGAAAATATAGGCAGTGACAATCAATTGTAAGAAATAGCGATTCTTTGACTTGGAGTTGGCATGTGATAATTTTCAGTTTTTCTTTTTTCAAGGAACGTGGTTGTTTCATGTGCAGAGGCAGTCGTCTCTTCCCCTATGAAAAATTGTTTAATTGTTTAATCATACCTTTTATTGGGCCTTATCTCTCAGTAGCATGAGCCATGAAACACGTCAAATTCTCCTGTTGACATCTGAAACTGGCATTTACAGGAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATTGAAGACCTATCGTACAATAAACAGGTATGAACTTGAACTATAGAAACAAAAATCTTCACTCATTTTGTCCTAACCCGAAATCCCTCTCTATGTGAAGGCATTTCATTGGGCATGAAGATTGTGTGGATGTTCTGGACTGGATAAAGAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAGGGACTTTGTCTTTCACTTCAAGTTGTCAAAATCAAAACATCCAAAAGTTGTTCTCGTTGTTATCGAGGTTAGCTTA</genome_strand>
        <mrna_strand>TCAATTGATTTTCGGTGTGAAGATATGCTCTTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAA............................................................................GCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATTGAAGACCTATCGTACAATAAACAG.........................................................................GCATTTCATTGGGCATGAAGATTGTGTGGATGTTCTGGACTGGATAAAGAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAGGGACTTTGTCTTTCACTTTAAGTTGTCAAAATCAAAACATCCAAAAGTTGTTCTCGTTGTTATCGAGGTTAGCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E246333" ref_strand="+" ref_description="SGN-E246333 [cLEF-40-F22]">
      <seq>tcaattgattttcggtgtgaagatatgctcttaggagcagatggaattctatctgaggccaggtggcttcttgatgtgggtcttttgccgaactcgaattctgctactcgggcaattggttaccgacaagcaatggaataccttctaaggtgtagggaagatggaggatggagttctgctggggacttccatgattttttatctgaatttcagaaagaatcacgaaattttgcaaaaaggcagatgacatggtttcgcaatgaacagatttatgagtggatagatgcttctaaacctttggaaaaggttcttagcttcatatgtgattcatataacagtcaggatggccatctccagatgcccgagtcacttcgtatgcggaaagatataagaaatcaccgtcaagctgcagtattgaagacctatcgtacaataaacaggcatttcattgggcatgaagattgtgtggatgttctggactggataaagaagatatatggccaacctactgactctctttgttaacgaacatctaaaggactttgtctttcacttcaagttgtcaaaatcaaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="4600" stop="8576"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4900" g_stop="4933" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4934" i_stop="5541" i_length="608">
            <donor d_prob="0.944" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5542" g_stop="5636" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="129" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5637" i_stop="5712" i_length="76">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5713" g_stop="5807" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="224" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5808" i_stop="7147" i_length="1340">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7148" g_stop="7223" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="300" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7224" i_stop="7927" i_length="704">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.655" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7928" g_stop="8067" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="440" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8068" i_stop="8140" i_length="73">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8141" g_stop="8276" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="576" r_length="136" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E246333" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246333" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4900" e_stop="4933"/>
          <exon e_start="5542" e_stop="5636"/>
          <exon e_start="5713" e_stop="5807"/>
          <exon e_start="7148" e_stop="7223"/>
          <exon e_start="7928" e_stop="8067"/>
          <exon e_start="8141" e_stop="8276"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTGATTTTCGGTGTGAAGATATGCTCTTAGGTAAAAGATAAATGAAATTTTTATAATTATTTGCTTTATTTAATATTTTTTTAAGGTCTTAGAATTCTTAATCAGAGCCTCATCCATTATTCACAAGCCTTCTAGGGAGAACATTCTTTTGCCTTAAGATTTTTGCGGTTATCATGATACCTAAGACTAATTATCTGCTTCTCTTCCTTCCTCCCTTCCTGCCCTTCTTCGTTTCATAATATTTTGACAAGACTGGAGGATTTTTTTCTCACATTTTGGAAAGATTAGATGTAGTAATTTGATCCTTTCTTTTTCTTTGTTCATAGTTTTCTTGTCATCTAAGGATATGTATTTCAGATAAGTTTCTTCTGAATAACTGGAGAAGCATTTTCTTTGGAAATTGGATAGTGAAATGTGAGCAATTTAAATAAGTACCAGTGATCATTTTGTTAATAAAGGTTAATTCTTCTTCCAAGAGTTAACCAGTGTGCTTTAAATTTGTAGTCCTTGAGATACTAATCGTTGCTTCAACTAAATAAATCTTTCTTTTAAATAAGAGCTTTCCATTTTAGTTCCTTAACAACTTTTTTTAGAATACCTTGATCCTAATTAATTCATTATGATGTTGGATACTGCAGGAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAAGTATATTTGCATCCCTATAGCTTGAACACAGTCCAATAGTTTGGTTACTAATATGTGTTTGTTCAAAATCTTTTAGGCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACGGTATTTTACTTTCACTGTGACTATGTAGTTGTCTCAAATTGTGATGATCTTAGTTGTTCTTGGTTTCTTGTATAGAAGATATGGATGTCGGGAAAACGACTGTCTTATTGTGTAATATAATATAATTTTTCAAAATGTTATCTTTCAATAAAATGGCCTTTTAGTATGAACCATTAAGGCCCCCTTGATTGAAATGTGTTTGATCTAACGGAAATTATTTTATTGAAAATATTTCCGGGGAAATGTTTTTCAGTGGAAGATTATTTTCCCAGAAAATGTTTTCTCGTGTTTGGTTGGTGAGTGAAAAATTATATTTGGAAATATACATACCAAAGACAATATTTTTAGGAAATTGGATAGTGTTTTACCAAAATTTGAGTAATAAAGATTAATAATTATGTCTAAGTGTTGGTTGGAGCAATTGATATGGAATTAATAGTCAACATAGTTATAACGAAAATGGCTTTCGTCCATAAGTGAGGGAGTTCATCCCGTCACCCCCCAGTAACCAAGCACTAGTGCATGACTTCCTCATGAAAATGTCTTTCTTAGAAAATAACTACTGTCATAAGTCATAACAAACACTTCCTCTATTATTTCACATATTAAGACAACCTTTCTTTCTTGACATTTAAATGTTGTATTTATCTGCTGTTTTTCTCTGTAGCGTCACAGTTTAGTTCTGGATGCTTATATGTTGTAGTCATTGTATGGATCAGCAAAAAGTTCCACAACTATTCCTGATAGAATTTTAATCATGTCTCCCCTGTCATTGTTGAAGACAACTTTCTACTTAACCCTCTCTTTCTTGTCTGCTGATCAAGCCACACTTCTTGATACTATAGTTACTTTTCAAGATGAGAAAAGAGCAGTATGGATGATTGTGGATGCAAAAGTGAGGAACTTCTGATAGTGCTGCCTAAATTGGTCAACCCTTACTCCTGTCTGGGCTCTGGTCCCTTCCATACATTTGGGTCTGGTCCATGCTTTTAGTGCTGGTTTTCCTGATTTGATTGGATCGTCTATAATACTATATCTTGGCAGTAGTATTAGAAATACTCTTGTAGTTTCTTGGCAGTAGTATTAGTAATATTCTCTTAGCGCTGGTTTTACAGTTCTTTCTTCTCTATGTTGCGTAATGCTCTCCATTTCACATTATTCCGTTGTTACTTTTCCCATATTGAAACTGCTGAAAATGTTTTTTAAATCCGGGTCTATCGGTAACATCATCTCTATTTCTACGAGGTAGGATTGGTTTCGTCTTGGTATGTTGTTGTTGTCTATAATGTTATTTCTTGCAAGTTATAAGCTGATTGACTGATTCTTATATTCTTGTGCAGAAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTGGTATGCCATTTCTGTTTTATAAGGAATTGTTGTGCCTTTTTTTTTTGTTATATAGAACTTTTATCAAGTTGGACATTTCTCTTCATTCCGGATGCAGTAGCTGAGTTCTGCTGGTCTATAAAAGTTGTTCACTGTTCCTTTTATTGACAGTATGATATTCATACAGTCATGCATGCATTATATATATGCGGATTTTTTCATCATCTCTTTGGGTATCCCATGGTTGGTATATTCTGTGTTGTGTCAGTCTGGATATGAAAGGTTGATTCTGGGAGGTTCAGAACAATAGTGGGTCCTTTTCTTAGCAATAATTACCTTAGTGTGGGAAGATTCTCTTTCAAATTGTTTACTTCTTTTTTTCATAGAGCTACAATCAGTTTCACGATGACCTCCTTTGGTTTTAGACGCTTATTCTTGCCTTGGGACTTCTCTTTTACCAAAAGCATGCCTTAAGGGAAAATATAGGCAGTGACAATCAATTGTAAGAAATAGCGATTCTTTGACTTGGAGTTGGCATGTGATAATTTTCAGTTTTTCTTTTTTCAAGGAACGTGGTTGTTTCATGTGCAGAGGCAGTCGTCTCTTCCCCTATGAAAAATTGTTTAATTGTTTAATCATACCTTTTATTGGGCCTTATCTCTCAGTAGCATGAGCCATGAAACACGTCAAATTCTCCTGTTGACATCTGAAACTGGCATTTACAGGAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATTGAAGACCTATCGTACAATAAACAGGTATGAACTTGAACTATAGAAACAAAAATCTTCACTCATTTTGTCCTAACCCGAAATCCCTCTCTATGTGAAGGCATTTCATTGGGCATGAAGATTGTGTGGATGTTCTGGACTGGATAAAGAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAGGGACTTTGTCTTTCACTTCAAGTTGTCAAAATCAAAACA</genome_strand>
        <mrna_strand>TCAATTGATTTTCGGTGTGAAGATATGCTCTTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAA............................................................................GCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATTGAAGACCTATCGTACAATAAACAG.........................................................................GCATTTCATTGGGCATGAAGATTGTGTGGATGTTCTGGACTGGATAAAGAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAAGGACTTTGTCTTTCACTTCAAGTTGTCAAAATCAAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E368597" ref_strand="+" ref_description="SGN-E368597 [TUS-23-J24]">
      <seq>tcaattgattttcggtgtgaagatatgctcttaggagcagatggaattctatctgaggccaggtggcttcttgatgtgggtcttttgccgaactcgaattctgctactcgggcaattggttaccgacaagcaatggaataccttctaaggtgtagggaagatggaggatggagttctgctggggacttccatgattttttatctgaatttcagaattatttttttttttttgcaaaaaggcagatgacatggtttcgcaatgaacagatttatgagtggatagatgcttctaaacctttggaaaaggttcttagcttcatatgtgattcatataacagtcaggatggccatctccagatgcccgagtcacttcgtatgcggaaagatataagaaatcaccgtcaagctgcagtattgaagacctatcgtacaataaacaggcatttcattgggcatgaagattgtgtggatgttctggactggataaagaagatatatggccaacctactgactctctttgttaacgaacatctaagggactttgtctttcacttcaagttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="4600" stop="8563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4900" g_stop="4933" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4934" i_stop="5541" i_length="608">
            <donor d_prob="0.944" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5542" g_stop="5636" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="129" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5637" i_stop="5712" i_length="76">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="5713" g_stop="5807" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="224" r_length="95" r_score="0.926"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="5808" i_stop="7147" i_length="1340">
            <donor d_prob="0.956" d_score="0.86"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7148" g_stop="7223" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="300" r_length="76" r_score="0.961"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7224" i_stop="7927" i_length="704">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.655" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="7928" g_stop="8067" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="440" r_length="140" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="8068" i_stop="8140" i_length="73">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.773" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="8141" g_stop="8263" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="563" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E368597" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368597" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4900" e_stop="4933"/>
          <exon e_start="5542" e_stop="5636"/>
          <exon e_start="5713" e_stop="5807"/>
          <exon e_start="7148" e_stop="7223"/>
          <exon e_start="7928" e_stop="8067"/>
          <exon e_start="8141" e_stop="8263"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTGATTTTCGGTGTGAAGATATGCTCTTAGGTAAAAGATAAATGAAATTTTTATAATTATTTGCTTTATTTAATATTTTTTTAAGGTCTTAGAATTCTTAATCAGAGCCTCATCCATTATTCACAAGCCTTCTAGGGAGAACATTCTTTTGCCTTAAGATTTTTGCGGTTATCATGATACCTAAGACTAATTATCTGCTTCTCTTCCTTCCTCCCTTCCTGCCCTTCTTCGTTTCATAATATTTTGACAAGACTGGAGGATTTTTTTCTCACATTTTGGAAAGATTAGATGTAGTAATTTGATCCTTTCTTTTTCTTTGTTCATAGTTTTCTTGTCATCTAAGGATATGTATTTCAGATAAGTTTCTTCTGAATAACTGGAGAAGCATTTTCTTTGGAAATTGGATAGTGAAATGTGAGCAATTTAAATAAGTACCAGTGATCATTTTGTTAATAAAGGTTAATTCTTCTTCCAAGAGTTAACCAGTGTGCTTTAAATTTGTAGTCCTTGAGATACTAATCGTTGCTTCAACTAAATAAATCTTTCTTTTAAATAAGAGCTTTCCATTTTAGTTCCTTAACAACTTTTTTTAGAATACCTTGATCCTAATTAATTCATTATGATGTTGGATACTGCAGGAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAAGTATATTTGCATCCCTATAGCTTGAACACAGTCCAATAGTTTGGTTACTAATATGTGTTTGTTCAAAATCTTTTAGGCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACGGTATTTTACTTTCACTGTGACTATGTAGTTGTCTCAAATTGTGATGATCTTAGTTGTTCTTGGTTTCTTGTATAGAAGATATGGATGTCGGGAAAACGACTGTCTTATTGTGTAATATAATATAATTTTTCAAAATGTTATCTTTCAATAAAATGGCCTTTTAGTATGAACCATTAAGGCCCCCTTGATTGAAATGTGTTTGATCTAACGGAAATTATTTTATTGAAAATATTTCCGGGGAAATGTTTTTCAGTGGAAGATTATTTTCCCAGAAAATGTTTTCTCGTGTTTGGTTGGTGAGTGAAAAATTATATTTGGAAATATACATACCAAAGACAATATTTTTAGGAAATTGGATAGTGTTTTACCAAAATTTGAGTAATAAAGATTAATAATTATGTCTAAGTGTTGGTTGGAGCAATTGATATGGAATTAATAGTCAACATAGTTATAACGAAAATGGCTTTCGTCCATAAGTGAGGGAGTTCATCCCGTCACCCCCCAGTAACCAAGCACTAGTGCATGACTTCCTCATGAAAATGTCTTTCTTAGAAAATAACTACTGTCATAAGTCATAACAAACACTTCCTCTATTATTTCACATATTAAGACAACCTTTCTTTCTTGACATTTAAATGTTGTATTTATCTGCTGTTTTTCTCTGTAGCGTCACAGTTTAGTTCTGGATGCTTATATGTTGTAGTCATTGTATGGATCAGCAAAAAGTTCCACAACTATTCCTGATAGAATTTTAATCATGTCTCCCCTGTCATTGTTGAAGACAACTTTCTACTTAACCCTCTCTTTCTTGTCTGCTGATCAAGCCACACTTCTTGATACTATAGTTACTTTTCAAGATGAGAAAAGAGCAGTATGGATGATTGTGGATGCAAAAGTGAGGAACTTCTGATAGTGCTGCCTAAATTGGTCAACCCTTACTCCTGTCTGGGCTCTGGTCCCTTCCATACATTTGGGTCTGGTCCATGCTTTTAGTGCTGGTTTTCCTGATTTGATTGGATCGTCTATAATACTATATCTTGGCAGTAGTATTAGAAATACTCTTGTAGTTTCTTGGCAGTAGTATTAGTAATATTCTCTTAGCGCTGGTTTTACAGTTCTTTCTTCTCTATGTTGCGTAATGCTCTCCATTTCACATTATTCCGTTGTTACTTTTCCCATATTGAAACTGCTGAAAATGTTTTTTAAATCCGGGTCTATCGGTAACATCATCTCTATTTCTACGAGGTAGGATTGGTTTCGTCTTGGTATGTTGTTGTTGTCTATAATGTTATTTCTTGCAAGTTATAAGCTGATTGACTGATTCTTATATTCTTGTGCAGAAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTGGTATGCCATTTCTGTTTTATAAGGAATTGTTGTGCCTTTTTTTTTTGTTATATAGAACTTTTATCAAGTTGGACATTTCTCTTCATTCCGGATGCAGTAGCTGAGTTCTGCTGGTCTATAAAAGTTGTTCACTGTTCCTTTTATTGACAGTATGATATTCATACAGTCATGCATGCATTATATATATGCGGATTTTTTCATCATCTCTTTGGGTATCCCATGGTTGGTATATTCTGTGTTGTGTCAGTCTGGATATGAAAGGTTGATTCTGGGAGGTTCAGAACAATAGTGGGTCCTTTTCTTAGCAATAATTACCTTAGTGTGGGAAGATTCTCTTTCAAATTGTTTACTTCTTTTTTTCATAGAGCTACAATCAGTTTCACGATGACCTCCTTTGGTTTTAGACGCTTATTCTTGCCTTGGGACTTCTCTTTTACCAAAAGCATGCCTTAAGGGAAAATATAGGCAGTGACAATCAATTGTAAGAAATAGCGATTCTTTGACTTGGAGTTGGCATGTGATAATTTTCAGTTTTTCTTTTTTCAAGGAACGTGGTTGTTTCATGTGCAGAGGCAGTCGTCTCTTCCCCTATGAAAAATTGTTTAATTGTTTAATCATACCTTTTATTGGGCCTTATCTCTCAGTAGCATGAGCCATGAAACACGTCAAATTCTCCTGTTGACATCTGAAACTGGCATTTACAGGAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATTGAAGACCTATCGTACAATAAACAGGTATGAACTTGAACTATAGAAACAAAAATCTTCACTCATTTTGTCCTAACCCGAAATCCCTCTCTATGTGAAGGCATTTCATTGGGCATGAAGATTGTGTGGATGTTCTGGACTGGATAAAGAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAGGGACTTTGTCTTTCACTTCAAGTTGT</genome_strand>
        <mrna_strand>TCAATTGATTTTCGGTGTGAAGATATGCTCTTAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAA............................................................................GCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAATTATTTTTT............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATTGAAGACCTATCGTACAATAAACAG.........................................................................GCATTTCATTGGGCATGAAGATTGTGTGGATGTTCTGGACTGGATAAAGAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAGGGACTTTGTCTTTCACTTCAAGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E335182" ref_strand="+" ref_description="SGN-E335182 [cTOE-1-B12]">
      <seq>gaagaatatggccaacctactgactctctttgttaacgaacatctaagggactttgtctttcacttcaagttgtcaaaatcaaaacatccaaaagttgttctcgttgttatcgaggttagcttatggagattattacaactattattagtattttgatttggttccacttcgagctgtgaaattgcttgcgcctacattaaactcccttgggatgtagcacttccctaatgtttactgagcttccctgtttcagatttgattgctacttttcccttaaaatttggatcgtttactagagagttctctttctctatctctatagtattgcgaaggttgaagttgttacaattgaagagggtaatgaggccgtcaagctgtggctggggaatgtcaatctgcatctatgaaattttgtacatgtaggagtctgttcaagagctttatttgccagaacatacattttccgcgaggatgttgctcgaatactgtatattcatttcgaatgtctcactcccatcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="7889" stop="9015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8189" g_stop="8719" g_length="531"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E335182" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="8189" e_stop="8719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAGGGACTTTGTCTTTCACTTCAAGTTGTCAAAATCAAAACATCCAAAAGTTGTTCTCGTTGTTATCGAGGTTAGCTTATGGAGATTATTACAACTATTATTAGTATTTTGATTTGGTTCCACTTCGAGCTGTGAAATTGCTTGCGCCTACATTAAACTCCCTTGGGATGTAGCACTTCCCTAATGTTTACTGAGCTTCCCTGTTTCAGATTTGATTGCTACTTTTCCCTTAAAATTTGGATCGTTTACTAGAGAGTTCTCTTTCTCTATCTCTATAGTATTGCGAAGGTTGAAGTTGTTACAATTGAAGAGGGTAATGAGGCCGTCAAGCTGTGGCTGGGGAATGTCAATCTGCATCTATGAAATTTTGTACATGTAGGAGTCTGTTCAAGAGCTTTATTTGCCAGAACATACATTTTCCGCGAGGATGTTGCTCGAATACTGTATATTCATTTCGAATGTCTCACTCCCATCAAACACATCGC</genome_strand>
        <mrna_strand>GAAGA-ATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAGGGACTTTGTCTTTCACTTCAAGTTGTCAAAATCAAAACATCCAAAAGTTGTTCTCGTTGTTATCGAGGTTAGCTTATGGAGATTATTACAACTATTATTAGTATTTTGATTTGGTTCCACTTCGAGCTGTGAAATTGCTTGCGCCTACATTAAACTCCCTTGGGATGTAGCACTTCCCTAATGTTTACTGAGCTTCCCTGTTTCAGATTTGATTGCTACTTTTCCCTTAAAATTTGGATCGTTTACTAGAGAGTTCTCTTTCTCTATCTCTATAGTATTGCGAAGGTTGAAGTTGTTACAATTGAAGAGGGTAATGAGGCCGTCAAGCTGTGGCTGGGGAATGTCAATCTGCATCTATGAAATTTTGTACATGTAGGAGTCTGTTCAAGAGCTTTATTTGCCAGAACATACATTTTCCGCGAGGATGTTGCTCGAATACTGTATATTCATTTCGAATGTCTCACTCCCATCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E368380" ref_strand="-" ref_description="SGN-E368380 [TUS-23-J23]">
      <seq>aattgcttgcgcctacattaaactcccttgggatgtagcacttccctaatgtttactgagcttccctgtttcagatttgattgctacttttcccttaaaatttggatcgtttactaaagagttctctttctctatctttatagtattgcgaaggttgaagttgttacaattgaaaagggtaatgaggccgtcaagctgtggctggggaatgtcaatctgcatctatgaaattttgtacatgtaggagtctgttcaaaagctttatttgccagaacatacattttccgcgaggatgttgctcgaatactgtatattcatttcgaatgtttccctcccatcaaacacatcgctggcatcccactccgatgcattttttaaatgtatttatatgcattttacatttgtctcgcataattgatacaagttgtgtgaggttttctttttgtttcccaaattggtggactcaaagtttgtaccaaaaaaagtgtaaaaaattgggttccctaacttgtaaaacaaaaagtataacttgtgttttgctgtatgaggcataaaaataaatgttttcgatatcataaaaatgagaacttggtcgcctgcgccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="8070" stop="9278"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="8370" g_stop="8988" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="619" r_length="619" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="620" polyA_stop="645"/>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E368380" ref_strand="-">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368380" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="8370" e_stop="8988"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGCTTGCGCCTACATTAAACTCCCTTGGGATGTAGCACTTCCCTAATGTTTACTGAGCTTCCCTGTTTCAGATTTGATTGCTACTTTTCCCTTAAAATTTGGATCGTTTACTAGAGAGTTCTCTTTCTCTATCTCTATAGTATTGCGAAGGTTGAAGTTGTTACAATTGAAGAGGGTAATGAGGCCGTCAAGCTGTGGCTGGGGAATGTCAATCTGCATCTATGAAATTTTGTACATGTAGGAGTCTGTTCAAGAGCTTTATTTGCCAGAACATACATTTTCCGCGAGGATGTTGCTCGAATACTGTATATTCATTTCGAATGTCTCACTCCCATCAAACACATCGCTGGCATCACACTCCGATGCATTTCTTAGATGTATTTATATGCATTTTACATTTGTCTCGCATAATTGATACAAGTTGTGTGAGGTTCTCTTTTTGTTTCACAAATTGGTGGACTCAAAGTTTGTACCAAAAAAAGTGTAAAGAATTGGGTTCACTAACTTGTAAAACAAAAAGTATAACTTGTGTTTTGCTGTATGAGGCATAAAAATAAATGTTCTCGATATCATAAAGATGAGAACTTGGTCGCATGCGCAAAGATATTTGAAGATA</genome_strand>
        <mrna_strand>AATTGCTTGCGCCTACATTAAACTCCCTTGGGATGTAGCACTTCCCTAATGTTTACTGAGCTTCCCTGTTTCAGATTTGATTGCTACTTTTCCCTTAAAATTTGGATCGTTTACTAAAGAGTTCTCTTTCTCTATCTTTATAGTATTGCGAAGGTTGAAGTTGTTACAATTGAAAAGGGTAATGAGGCCGTCAAGCTGTGGCTGGGGAATGTCAATCTGCATCTATGAAATTTTGTACATGTAGGAGTCTGTTCAAAAGCTTTATTTGCCAGAACATACATTTTCCGCGAGGATGTTGCTCGAATACTGTATATTCATTTCGAATGTTTCCCTCCCATCAAACACATCGCTGGCATCCCACTCCGATGCATTTTTTAAATGTATTTATATGCATTTTACATTTGTCTCGCATAATTGATACAAGTTGTGTGAGGTTTTCTTTTTGTTTCCCAAATTGGTGGACTCAAAGTTTGTACCAAAAAAAGTGTAAAAAATTGGGTTCCCTAACTTGTAAAACAAAAAGTATAACTTGTGTTTTGCTGTATGAGGCATAAAAATAAATGTTTTCGATATCATAAAAATGAGAACTTGGTCGCCTGCGCCAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E720019" ref_strand="+" ref_description="SGN-E720019 [FC09CD01]">
      <seq>tagggcgattggcggccaatcggccgaattggcaactcaacactcccttttaacattttcgcttcaggtttttctccgacatagcaatgaggacatccgtggtgagattactggctcgcagaacctcaaccgccggcctcacacgccggggatttgcatcggaatctgctccggacaggaaagtcgctattttaggtgcagctggagggatcgggcagcctctgtcacttctcatgaaactgaatcctttagtttccagacttgcactctacgatattgccggaactcctggtgttgccgctgatgtcagccatatcaacaccagatctgagattttgggttatgcaggagaagaacagctagggaaggctttggagggagctgatgttgtcattattccagctggtgtgccacggaaacctggtatgacccgtgatgatctgttcaacattaatgctggtattgttaagtctctttgcacagctattgcaaagtattgccctcatgcacttgtcaatgtgatcagcaaccccgtgaattccactgtcccaattgcatctgaggtgttcaagaaggctggaacctatgatgagaagagactctttggagtgaccacacttgacgttgttagggcaaagactttctatgctggaaaagctaaagttaacgttgctgatgtcaatgtccctgttgttggtggtcatgctggcgtaactatcctcccgttattttcccaagccactccaagtgcaaatttgtcaagtgaagacattcaggcacttaccaagcgtacccaagatggtggcactgaagttgtggaggccaaggctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10121" stop="13743"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10421" g_stop="10721" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="332" r_length="301" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10722" i_stop="12602" i_length="1881">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12603" g_stop="12776" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="506" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12777" i_stop="12875" i_length="99">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12876" g_stop="13044" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="675" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13045" i_stop="13154" i_length="110">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13155" g_stop="13216" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="676" r_stop="737" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13217" i_stop="13348" i_length="132">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13349" g_stop="13443" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="832" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E720019" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>801</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10421" e_stop="10721"/>
          <exon e_start="12603" e_stop="12776"/>
          <exon e_start="12876" e_stop="13044"/>
          <exon e_start="13155" e_stop="13216"/>
          <exon e_start="13349" e_stop="13443"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAACTCAACACTCCCTTTTAACATTTTCGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAGGTTAATTTCTGTTTTATCTTGTCTGCTCTTCTGATGAATGTGTGGTTTCTCACTCTTTTAAGCCCTAGAATTTTAATTGCTCTGATGTATCAGTGTCGTTTGATGAATTTAGGGACTTGATTTCTGTTTTATGTTGATTACCTGTTATTTTTTTTGAGTTTTCTTTTGATTCCTATTATATACCAGGTATGATGATAAGCTAAATACTAAATAATGATGTAAAGGCATAGAATTATCAGAAAGAAACTCTTATGAAATTTTATATAAGCGTTTGTTGTAGATGACTTCAATATTCAATGGAAAATACTTCACATACTCCAGTGATTTTATTATTACTGTGATCCTTGATTCCTTGTGAAATTTTTCAAGGAAAATTTTTATTGGAGTAAAACTACAAAAATGTGAAATATAAATATTACATTTCGCTAGTTAAGATGACAACTTTACTTTACTAACAAGGGAGTTGATTGGAATTTGGGTATGGAGAAGCGTTTCACTGAACAAATTTTTAGGATAAGTTGAAGTAAGACGTAATATATATCCAAGTTTAGCTCTCCTACCATAAGGACGAAGGTGAAGAGAGATTGGATAAAATTGTGCTGTCACTTAATCTCTTGAAGAGAATAATGTGATAGACAAAAATATAGTAGATTGGTTGATAGAAATATATTGATTGAAGTGCTCAATCTTTTGAAGTGAATGGCGTGAATAGACGAAAATATAGTAGATTGATTGAATTTTAGTGATGGAAGTGAAAGATTGCTTCGAGATTCCTACTTGAGAAGGTAAATTTATAAAATGGTTGTGAGATCAACAATGTGATATGGGGTGAACTTTGGGTCTCAAAATGCTTATCATATCCACAAGATTAACTGTCATTGAAACTTTAGATGCAAATATAGATGTGCAGTCATAGAAGATTGGACAAAAATAGAAATGGTCACATCAGACAAAAAGTGCAAGTATCACACAGAGGATTAAGTAGTAAAAAGTTGCCATAGATGGTTTGGCTATGCCTTGCATAAACCTGCAAACACTATTCCGCACGTACAGCGTTGTGGTGATTGAAGATGCTATAAAAAGAGATCAGGTTGAACTAAAATCACGTGGAAGAAAATTGCTTTAAAAGTAGTATAATCCTTCTGTATCAATGCGGATTTATCTAAGAATATAGAACAAAAGATCTATAAGAGATACGAATTAGCTAGACTAAGCCTTAGTCATTGCTACACTAGCTTTAGCTTCAAATAGGGATTGGTCTGAAGTTTGAAGAACTTATAGTTTTAGGGACTCCTAGTTTACCATAAAAGATATAATAATATCAAATTGAGATGGACCAAATACAGCAAGATATCTAGAACATTTATATCATTGACTCCTGCAGTTAGAGATTGAGGTATAGTTAATTAAATTGCCTGATGTTCTTATTACTTTATAGTAAATATACAAACTTTTCTCAAAATATACGGAGAGATAATATGTAAGAAATGGTTAACTGAATAAGTGATCAAATAAAATGTTATTCTTTTCTGATTTATGTGCTCTTATGCATCTATTCCTAATACTTGTAATGTTATACATTACTGAATTTGGTAATACTACATAATTAATGTTGATATTGTGAATACTGAGAGTAAAAGTGAAAACCAAACACTAAACAACTAATGCAGAATTTAGTTGGGGGTTTATTTTGAAAAATATGGATCTCCCAAACGACCTCTTACTTTTATCCTAATGATGTAATCCTTTGCACAATAAGCCAAATAATGTTATACTTTTTATCCCACTTGCCTCACCTGCAATCCACAGACTGAACGACCTCAGTGTCTGATCTCTAGTCCTTGCAGTTCCTTGACCATTATTTTTTTCATGGACTTGCAGATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCATGTAAGCACCCATATTTGTTACATATTAGTTAAGATGTTCGAGTAAGAAATACCGACTCTTCCTCTTTCCTCTAATGCCTTCCCTTCAAATCTCCAAAAGGCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTGGTATGCATCGTTGTGATTTCCATCTTTGATTTGCTTCTATTTCATTGTATTAAACCGTCAATTCATGTAAAGTTTTTATTCACTACAAAAAATTTGGTGCATTGTTCCAGATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAAGTAATCTTTCTTTTCTATTGTTTTATCTAGGTTATTTAAAATTATGTCTACGTTGACTCATAAAAAAAGATGAACTCCACCTTGTAACTTTATTATTTCTTGTCTTGTTGTTATCTCTAAATGTTGCAATAGGCCACTCCAAGTGCAAATTTGTCAAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGG</genome_strand>
        <mrna_strand>GCAACTCAACACTCCCTTTTAACATTTTCGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCAT...................................................................................................GCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTG..............................................................................................................ATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAA....................................................................................................................................GCCACTCCAAGTGCAAATTTGTCAAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E603918" ref_strand="+" ref_description="SGN-E603918 [67107]">
      <seq>acatttctctcattttcgacttcacatttttctccgccatagcaatgagaacatccatgttgagaactctggctcgcagaaactcaaccgccggtacacgccggggattcgcatcggagtctgctccggacaggaaagttgctattttaggtgcagctggagggatcgggcagccgctgtcacttctcatgaaactgaatcctttagtttccagacttgcactctacgatattgctggaactcctggtgttgccgctgatgtcagccacatcaacaccagatctgagattttgggttatgcaggagaagaacagctagggaaggctttggagggagctgatgttgtcattattccggctggtgtgccacgaaagcctggtatgacccgtgatgatctgttcaacattaacgctggtattgttaagtctctttgcacagctattgcaaagtattgccctcatgcacttgtcaatgtgatcagcaaccccggtgaattccactgtcccaattgcatctgaggtgttcaagaaggctggaacctatgatgagaagagactctttggagtgaccacacttgatgttgttagggcaaagactttctatgctggaaaagctaaagttaactgttgcgtgatgtcattgtccccggttgttggtggtcacgctggcgtaactatcctcccgttatttttcccaaggccactccaagtgcgaaatttgttcaacgtgaagaaacttgagggcactcacccaaggcaccccaaggatggtggncactgaacgttgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10230" stop="13730"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10433" g_stop="10721" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="0.907"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10722" i_stop="12602" i_length="1881">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12603" g_stop="12776" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="461" r_length="174" r_score="0.977"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12777" i_stop="12875" i_length="99">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12876" g_stop="13044" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="633" r_length="172" r_score="0.959"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13045" i_stop="13154" i_length="110">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13155" g_stop="13216" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="697" r_length="64" r_score="0.887"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13217" i_stop="13348" i_length="132">
            <donor d_prob="0.995" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13349" g_stop="13368" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="718" r_length="21" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E603918" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.905" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E603918" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10433" e_stop="10721"/>
          <exon e_start="12603" e_stop="12776"/>
          <exon e_start="12876" e_stop="13044"/>
          <exon e_start="13155" e_stop="13216"/>
          <exon e_start="13349" e_stop="13368"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCTTTTAACATTTTCG-CTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAGGTTAATTTCTGTTTTATCTTGTCTGCTCTTCTGATGAATGTGTGGTTTCTCACTCTTTTAAGCCCTAGAATTTTAATTGCTCTGATGTATCAGTGTCGTTTGATGAATTTAGGGACTTGATTTCTGTTTTATGTTGATTACCTGTTATTTTTTTTGAGTTTTCTTTTGATTCCTATTATATACCAGGTATGATGATAAGCTAAATACTAAATAATGATGTAAAGGCATAGAATTATCAGAAAGAAACTCTTATGAAATTTTATATAAGCGTTTGTTGTAGATGACTTCAATATTCAATGGAAAATACTTCACATACTCCAGTGATTTTATTATTACTGTGATCCTTGATTCCTTGTGAAATTTTTCAAGGAAAATTTTTATTGGAGTAAAACTACAAAAATGTGAAATATAAATATTACATTTCGCTAGTTAAGATGACAACTTTACTTTACTAACAAGGGAGTTGATTGGAATTTGGGTATGGAGAAGCGTTTCACTGAACAAATTTTTAGGATAAGTTGAAGTAAGACGTAATATATATCCAAGTTTAGCTCTCCTACCATAAGGACGAAGGTGAAGAGAGATTGGATAAAATTGTGCTGTCACTTAATCTCTTGAAGAGAATAATGTGATAGACAAAAATATAGTAGATTGGTTGATAGAAATATATTGATTGAAGTGCTCAATCTTTTGAAGTGAATGGCGTGAATAGACGAAAATATAGTAGATTGATTGAATTTTAGTGATGGAAGTGAAAGATTGCTTCGAGATTCCTACTTGAGAAGGTAAATTTATAAAATGGTTGTGAGATCAACAATGTGATATGGGGTGAACTTTGGGTCTCAAAATGCTTATCATATCCACAAGATTAACTGTCATTGAAACTTTAGATGCAAATATAGATGTGCAGTCATAGAAGATTGGACAAAAATAGAAATGGTCACATCAGACAAAAAGTGCAAGTATCACACAGAGGATTAAGTAGTAAAAAGTTGCCATAGATGGTTTGGCTATGCCTTGCATAAACCTGCAAACACTATTCCGCACGTACAGCGTTGTGGTGATTGAAGATGCTATAAAAAGAGATCAGGTTGAACTAAAATCACGTGGAAGAAAATTGCTTTAAAAGTAGTATAATCCTTCTGTATCAATGCGGATTTATCTAAGAATATAGAACAAAAGATCTATAAGAGATACGAATTAGCTAGACTAAGCCTTAGTCATTGCTACACTAGCTTTAGCTTCAAATAGGGATTGGTCTGAAGTTTGAAGAACTTATAGTTTTAGGGACTCCTAGTTTACCATAAAAGATATAATAATATCAAATTGAGATGGACCAAATACAGCAAGATATCTAGAACATTTATATCATTGACTCCTGCAGTTAGAGATTGAGGTATAGTTAATTAAATTGCCTGATGTTCTTATTACTTTATAGTAAATATACAAACTTTTCTCAAAATATACGGAGAGATAATATGTAAGAAATGGTTAACTGAATAAGTGATCAAATAAAATGTTATTCTTTTCTGATTTATGTGCTCTTATGCATCTATTCCTAATACTTGTAATGTTATACATTACTGAATTTGGTAATACTACATAATTAATGTTGATATTGTGAATACTGAGAGTAAAAGTGAAAACCAAACACTAAACAACTAATGCAGAATTTAGTTGGGGGTTTATTTTGAAAAATATGGATCTCCCAAACGACCTCTTACTTTTATCCTAATGATGTAATCCTTTGCACAATAAGCCAAATAATGTTATACTTTTTATCCCACTTGCCTCACCTGCAATCCACAGACTGAACGACCTCAGTGTCTGATCTCTAGTCCTTGCAGTTCCTTGACCATTATTTTTTTCATGGACTTGCAGATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCATGTAAGCACCCATATTTGTTACATATTAGTTAAGATGTTCGAGTAAGAAATACCGACTCTTCCTCTTTCCTCTAATGCCTTCCCTTCAAATCTCCAAAAGGCACTTGTCAATGTGATCAGCAACCCC-GTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAAC-GTTGC-TGGTATGCATCGTTGTGATTTCCATCTTTGATTTGCTTCTATTTCATTGTATTAAACCGTCAATTCATGTAAAGTTTTTATTCACTACAAAAAATTTGGTGCATTGTTCCAGATGTCAATGT-CCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTA-TTTTCCCAAGTAATCTTTCTTTTCTATTGTTTTATCTAGGTTATTTAAAATTATGTCTACGTTGACTCATAAAAAAAGATGAACTCCACCTTGTAACTTTATTATTTCTTGTCTTGTTGTTATCTCTAAATGTTGCAATAG-GCCACTCCAAGTGCAAATTT</genome_strand>
        <mrna_strand>ACATTTCTCTCATTTTCGACTTCACATTTTTCTCCGCCATAGCAATGAGAACATCCATGTTGAGAACTCTGGCTCGCAGAAACTCAACCGCCGG--T-ACACGCCGGGGATTCGCATCGGAGTCTGCTCCGGACAGGAAAGTTGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCGCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCTGGAACTCCTGGTGTTGCCGCTGATGTCAGCCACATCAACACCAGATCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCGGCTGGTGTGCCACGAAAGCCTGGTATGACCCGTGATGATCTGTTCAACATTAACGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCAT...................................................................................................GCACTTGTCAATGTGATCAGCAACCCCGGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGATGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACTGTTGCGTG..............................................................................................................ATGTCATTGTCCCCGGTTGTTGGTGGTCACGCTGGCGTAACTATCCTCCCGTTATTTTTCCCAA....................................................................................................................................GGCCACTCCAAGTGCGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E342710" ref_strand="+" ref_description="SGN-E342710 [cTOF-7-P16]">
      <seq>ccttttaacattttcgcttcaggtttttctccgacatagcaatgaggacatccgtggtgagattactggctcgcagaacctcaaccgccggcctcacacgccggggatttgcatcggaatctgctccggacaggaaagtcgctattttaggtgcagctggagggatcgggcagcctctgtcacttctcatgaaactgaatcctttagtttccagacttgcactctacgatattgccggaactcctggtgttgccgctgatgtcagccatatcaacaccagatctgagattttgggttatgcaggagaagaacagctagggaaggctttggagggagctgatgttgtcattattccagctggtgtgccacggaaacctggtatgacccgtgatgatctgttcaacattaatgctggtattgttaagtctctttgcacagctattgcaaagtattgccctcatgcacttgtcaatgtgatcagcaaccccgtgaattccactgtcccaattgcatctgaggtgttcaagaaggctggaacctatgatgagaagagactctttggagtgaccacacttgacgttgttagggcaaagactttctatgctggaaaagctaaagttaacgttgctgatgtcaatgtcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10135" stop="13355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10435" g_stop="10721" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="287" r_length="287" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10722" i_stop="12602" i_length="1881">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12603" g_stop="12776" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="461" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12777" i_stop="12875" i_length="99">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12876" g_stop="13044" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="630" r_length="169" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13045" i_stop="13154" i_length="110">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13155" g_stop="13166" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="631" r_stop="642" r_length="12" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E342710" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10435" e_stop="10721"/>
          <exon e_start="12603" e_stop="12776"/>
          <exon e_start="12876" e_stop="13044"/>
          <exon e_start="13155" e_stop="13166"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTTAACATTTTCGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAGGTTAATTTCTGTTTTATCTTGTCTGCTCTTCTGATGAATGTGTGGTTTCTCACTCTTTTAAGCCCTAGAATTTTAATTGCTCTGATGTATCAGTGTCGTTTGATGAATTTAGGGACTTGATTTCTGTTTTATGTTGATTACCTGTTATTTTTTTTGAGTTTTCTTTTGATTCCTATTATATACCAGGTATGATGATAAGCTAAATACTAAATAATGATGTAAAGGCATAGAATTATCAGAAAGAAACTCTTATGAAATTTTATATAAGCGTTTGTTGTAGATGACTTCAATATTCAATGGAAAATACTTCACATACTCCAGTGATTTTATTATTACTGTGATCCTTGATTCCTTGTGAAATTTTTCAAGGAAAATTTTTATTGGAGTAAAACTACAAAAATGTGAAATATAAATATTACATTTCGCTAGTTAAGATGACAACTTTACTTTACTAACAAGGGAGTTGATTGGAATTTGGGTATGGAGAAGCGTTTCACTGAACAAATTTTTAGGATAAGTTGAAGTAAGACGTAATATATATCCAAGTTTAGCTCTCCTACCATAAGGACGAAGGTGAAGAGAGATTGGATAAAATTGTGCTGTCACTTAATCTCTTGAAGAGAATAATGTGATAGACAAAAATATAGTAGATTGGTTGATAGAAATATATTGATTGAAGTGCTCAATCTTTTGAAGTGAATGGCGTGAATAGACGAAAATATAGTAGATTGATTGAATTTTAGTGATGGAAGTGAAAGATTGCTTCGAGATTCCTACTTGAGAAGGTAAATTTATAAAATGGTTGTGAGATCAACAATGTGATATGGGGTGAACTTTGGGTCTCAAAATGCTTATCATATCCACAAGATTAACTGTCATTGAAACTTTAGATGCAAATATAGATGTGCAGTCATAGAAGATTGGACAAAAATAGAAATGGTCACATCAGACAAAAAGTGCAAGTATCACACAGAGGATTAAGTAGTAAAAAGTTGCCATAGATGGTTTGGCTATGCCTTGCATAAACCTGCAAACACTATTCCGCACGTACAGCGTTGTGGTGATTGAAGATGCTATAAAAAGAGATCAGGTTGAACTAAAATCACGTGGAAGAAAATTGCTTTAAAAGTAGTATAATCCTTCTGTATCAATGCGGATTTATCTAAGAATATAGAACAAAAGATCTATAAGAGATACGAATTAGCTAGACTAAGCCTTAGTCATTGCTACACTAGCTTTAGCTTCAAATAGGGATTGGTCTGAAGTTTGAAGAACTTATAGTTTTAGGGACTCCTAGTTTACCATAAAAGATATAATAATATCAAATTGAGATGGACCAAATACAGCAAGATATCTAGAACATTTATATCATTGACTCCTGCAGTTAGAGATTGAGGTATAGTTAATTAAATTGCCTGATGTTCTTATTACTTTATAGTAAATATACAAACTTTTCTCAAAATATACGGAGAGATAATATGTAAGAAATGGTTAACTGAATAAGTGATCAAATAAAATGTTATTCTTTTCTGATTTATGTGCTCTTATGCATCTATTCCTAATACTTGTAATGTTATACATTACTGAATTTGGTAATACTACATAATTAATGTTGATATTGTGAATACTGAGAGTAAAAGTGAAAACCAAACACTAAACAACTAATGCAGAATTTAGTTGGGGGTTTATTTTGAAAAATATGGATCTCCCAAACGACCTCTTACTTTTATCCTAATGATGTAATCCTTTGCACAATAAGCCAAATAATGTTATACTTTTTATCCCACTTGCCTCACCTGCAATCCACAGACTGAACGACCTCAGTGTCTGATCTCTAGTCCTTGCAGTTCCTTGACCATTATTTTTTTCATGGACTTGCAGATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCATGTAAGCACCCATATTTGTTACATATTAGTTAAGATGTTCGAGTAAGAAATACCGACTCTTCCTCTTTCCTCTAATGCCTTCCCTTCAAATCTCCAAAAGGCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTGGTATGCATCGTTGTGATTTCCATCTTTGATTTGCTTCTATTTCATTGTATTAAACCGTCAATTCATGTAAAGTTTTTATTCACTACAAAAAATTTGGTGCATTGTTCCAGATGTCAATGTCC</genome_strand>
        <mrna_strand>CCTTTTAACATTTTCGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCAT...................................................................................................GCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTG..............................................................................................................ATGTCAATGTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E339803" ref_strand="+" ref_description="SGN-E339803 [cTOE-16-N4]">
      <seq>ttttaacattttcgcttcaggtttttctccgacatagcaatgaggacatccgtggtgagattactggctcgcagaacctcaaccgccggcctcacacgccggggatttgcatcggaatctgctccggacaggaaagtcgctattttaggtgcagctggagggatcgggcagcctctgtcacttctcatgaaactgaatcctttagtttccagacttgcactctacgatattgccggaactcctggtgttgccgctgatgtcagccatatcaacaccagatctgagattttgggttatgcaggagaagaacagctagggaaggctttggagggagctgatgttgtcattattccagctggtgtgccacggaaacctggtatgacccgtgatgatctgttcaacattaatgctggtattgttaagtctctttgcacagctattgcaaagtattgccctcatgcacttgtcaatgtgatcagcaaccccgtgaattccactgtcccaattgcatctgaggtgttcaagaaagctggaacctatgatgagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10137" stop="13265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10437" g_stop="10721" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10722" i_stop="12602" i_length="1881">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12603" g_stop="12776" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="459" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12777" i_stop="12875" i_length="99">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12876" g_stop="12965" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="460" r_stop="549" r_length="90" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E339803" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339803" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10437" e_stop="10721"/>
          <exon e_start="12603" e_stop="12776"/>
          <exon e_start="12876" e_stop="12965"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAACATTTTCGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAGGTTAATTTCTGTTTTATCTTGTCTGCTCTTCTGATGAATGTGTGGTTTCTCACTCTTTTAAGCCCTAGAATTTTAATTGCTCTGATGTATCAGTGTCGTTTGATGAATTTAGGGACTTGATTTCTGTTTTATGTTGATTACCTGTTATTTTTTTTGAGTTTTCTTTTGATTCCTATTATATACCAGGTATGATGATAAGCTAAATACTAAATAATGATGTAAAGGCATAGAATTATCAGAAAGAAACTCTTATGAAATTTTATATAAGCGTTTGTTGTAGATGACTTCAATATTCAATGGAAAATACTTCACATACTCCAGTGATTTTATTATTACTGTGATCCTTGATTCCTTGTGAAATTTTTCAAGGAAAATTTTTATTGGAGTAAAACTACAAAAATGTGAAATATAAATATTACATTTCGCTAGTTAAGATGACAACTTTACTTTACTAACAAGGGAGTTGATTGGAATTTGGGTATGGAGAAGCGTTTCACTGAACAAATTTTTAGGATAAGTTGAAGTAAGACGTAATATATATCCAAGTTTAGCTCTCCTACCATAAGGACGAAGGTGAAGAGAGATTGGATAAAATTGTGCTGTCACTTAATCTCTTGAAGAGAATAATGTGATAGACAAAAATATAGTAGATTGGTTGATAGAAATATATTGATTGAAGTGCTCAATCTTTTGAAGTGAATGGCGTGAATAGACGAAAATATAGTAGATTGATTGAATTTTAGTGATGGAAGTGAAAGATTGCTTCGAGATTCCTACTTGAGAAGGTAAATTTATAAAATGGTTGTGAGATCAACAATGTGATATGGGGTGAACTTTGGGTCTCAAAATGCTTATCATATCCACAAGATTAACTGTCATTGAAACTTTAGATGCAAATATAGATGTGCAGTCATAGAAGATTGGACAAAAATAGAAATGGTCACATCAGACAAAAAGTGCAAGTATCACACAGAGGATTAAGTAGTAAAAAGTTGCCATAGATGGTTTGGCTATGCCTTGCATAAACCTGCAAACACTATTCCGCACGTACAGCGTTGTGGTGATTGAAGATGCTATAAAAAGAGATCAGGTTGAACTAAAATCACGTGGAAGAAAATTGCTTTAAAAGTAGTATAATCCTTCTGTATCAATGCGGATTTATCTAAGAATATAGAACAAAAGATCTATAAGAGATACGAATTAGCTAGACTAAGCCTTAGTCATTGCTACACTAGCTTTAGCTTCAAATAGGGATTGGTCTGAAGTTTGAAGAACTTATAGTTTTAGGGACTCCTAGTTTACCATAAAAGATATAATAATATCAAATTGAGATGGACCAAATACAGCAAGATATCTAGAACATTTATATCATTGACTCCTGCAGTTAGAGATTGAGGTATAGTTAATTAAATTGCCTGATGTTCTTATTACTTTATAGTAAATATACAAACTTTTCTCAAAATATACGGAGAGATAATATGTAAGAAATGGTTAACTGAATAAGTGATCAAATAAAATGTTATTCTTTTCTGATTTATGTGCTCTTATGCATCTATTCCTAATACTTGTAATGTTATACATTACTGAATTTGGTAATACTACATAATTAATGTTGATATTGTGAATACTGAGAGTAAAAGTGAAAACCAAACACTAAACAACTAATGCAGAATTTAGTTGGGGGTTTATTTTGAAAAATATGGATCTCCCAAACGACCTCTTACTTTTATCCTAATGATGTAATCCTTTGCACAATAAGCCAAATAATGTTATACTTTTTATCCCACTTGCCTCACCTGCAATCCACAGACTGAACGACCTCAGTGTCTGATCTCTAGTCCTTGCAGTTCCTTGACCATTATTTTTTTCATGGACTTGCAGATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCATGTAAGCACCCATATTTGTTACATATTAGTTAAGATGTTCGAGTAAGAAATACCGACTCTTCCTCTTTCCTCTAATGCCTTCCCTTCAAATCTCCAAAAGGCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAG</genome_strand>
        <mrna_strand>TTTTAACATTTTCGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCAT...................................................................................................GCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAAGCTGGAACCTATGATGAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E474324" ref_strand="+" ref_description="SGN-E474324 [cSTB-36-K15]">
      <seq>ctctcattttcgacttcacatttttctccgccatagcaatgaggacatccatgttgagaactctggctcgcagaacctcaaccgccggaacacgccggggattcgcatcggagtctgctccggacaggaaagttgctattttaggtgcagctggagggatcgggcagccgctgtcacttctcatgaaactgaatcctttagtttccagacttgcactctacgatattgctggaactcctggtgttgccgctgatgtcagccacatcaacaccagatctgagatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10143" stop="11024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10439" g_stop="10721" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="281" r_length="281" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E474324" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>283</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474324" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10439" e_stop="10721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACATTTTCG-CTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAG</genome_strand>
        <mrna_strand>CTCTCATTTTCGACTTCACATTTTTCTCCGCCATAGCAATGAGGACATCCATGTTGAGAACTCTGGCTCGCAGAACCTCAACCGCCGG---AACACGCCGGGGATTCGCATCGGAGTCTGCTCCGGACAGGAAAGTTGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCGCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCTGGAACTCCTGGTGTTGCCGCTGATGTCAGCCACATCAACACCAGATCTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E624164" ref_strand="+" ref_description="SGN-E624164 [GI|21388549]">
      <seq>ggcacgaggctctcattttcgacttcacatttttctccgccatagcaatgaggacatccatgttgagaactctggctcgcagaacctcaaccgccggaacacgccggggattcgcatcggagtctgctccggacaggaaagttgctattttaggtgcagctggagggatcgggcagccgctgtcacttctcatgaaactgaatcctttagtttccagacttgcactctacgatattgctggaactcctggtgttgccgctgatgtcagccacatcaacaccagatctgagattttgggttatgcaggagaagaacagctagggaaggctttggagggagctgatgttgtcattattccagctggtgtgccacgaaagcctggtatgacccgtgatgatctgttcaacattaacgctggtattgttaagtctctttgcacagctattgcaaagtattgccctcatgcacttgtcaatgtgatcagcaaccccgtgaattccactgtcccaattgcatctgaggtgttcaagaaggctggaacctatgatgagaagagactctttggagtgaccacacttgatgttgttagggcaaagactttctatgctggaaaagctaaagttaatgttgctgatgtcattgtccccgttgttggtggtcacgctggcgtaactatcctcccgttattttcccaagccactccaagtgcaaatttgtcaagtgaagaaattgaggcactcaccaagcgcacccaagatggtggcactgaagttgtggaggccaaggctggaaagggttcagccaccctctcgatggcctatgctggtgccatctttgcagattgcttgcttgaatgggacttgaatggggttccaggatgtttgtacagttgtcattcgtacagtcaacttgtgacagaacctgccatctctttgcatccaaggttgagattcgggaaaaatggcgtggaagaagtcttgggattaggcgcactttcagactacgagaaagaaggacttgaagctcttaaaccagagctgaaatcgtccattgagaaaggaatcaaatttgccaatgcctaattaaacataacaccaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10143" stop="15056"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10444" g_stop="10721" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="290" r_length="276" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10722" i_stop="12602" i_length="1881">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12603" g_stop="12776" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="464" r_length="174" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12777" i_stop="12875" i_length="99">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12876" g_stop="13044" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="633" r_length="169" r_score="0.988"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13045" i_stop="13154" i_length="110">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13155" g_stop="13216" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="634" r_stop="695" r_length="62" r_score="0.952"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13217" i_stop="13348" i_length="132">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13349" g_stop="13470" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="696" r_stop="817" r_length="122" r_score="0.967"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="13471" i_stop="14200" i_length="730">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.83"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14201" g_stop="14318" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="818" r_stop="943" r_length="126" r_score="0.805"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="14319" i_stop="14590" i_length="272">
            <donor d_prob="0.996" d_score="0.83"/>
            <acceptor a_prob="0.999" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="14591" g_stop="14728" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="944" r_stop="1082" r_length="139" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1097" polyA_stop="1142"/>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E624164" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>1061</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E624164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10444" e_stop="10721"/>
          <exon e_start="12603" e_stop="12776"/>
          <exon e_start="12876" e_stop="13044"/>
          <exon e_start="13155" e_stop="13216"/>
          <exon e_start="13349" e_stop="13470"/>
          <exon e_start="14201" e_stop="14318"/>
          <exon e_start="14591" e_stop="14728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTCG-CTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAGGTTAATTTCTGTTTTATCTTGTCTGCTCTTCTGATGAATGTGTGGTTTCTCACTCTTTTAAGCCCTAGAATTTTAATTGCTCTGATGTATCAGTGTCGTTTGATGAATTTAGGGACTTGATTTCTGTTTTATGTTGATTACCTGTTATTTTTTTTGAGTTTTCTTTTGATTCCTATTATATACCAGGTATGATGATAAGCTAAATACTAAATAATGATGTAAAGGCATAGAATTATCAGAAAGAAACTCTTATGAAATTTTATATAAGCGTTTGTTGTAGATGACTTCAATATTCAATGGAAAATACTTCACATACTCCAGTGATTTTATTATTACTGTGATCCTTGATTCCTTGTGAAATTTTTCAAGGAAAATTTTTATTGGAGTAAAACTACAAAAATGTGAAATATAAATATTACATTTCGCTAGTTAAGATGACAACTTTACTTTACTAACAAGGGAGTTGATTGGAATTTGGGTATGGAGAAGCGTTTCACTGAACAAATTTTTAGGATAAGTTGAAGTAAGACGTAATATATATCCAAGTTTAGCTCTCCTACCATAAGGACGAAGGTGAAGAGAGATTGGATAAAATTGTGCTGTCACTTAATCTCTTGAAGAGAATAATGTGATAGACAAAAATATAGTAGATTGGTTGATAGAAATATATTGATTGAAGTGCTCAATCTTTTGAAGTGAATGGCGTGAATAGACGAAAATATAGTAGATTGATTGAATTTTAGTGATGGAAGTGAAAGATTGCTTCGAGATTCCTACTTGAGAAGGTAAATTTATAAAATGGTTGTGAGATCAACAATGTGATATGGGGTGAACTTTGGGTCTCAAAATGCTTATCATATCCACAAGATTAACTGTCATTGAAACTTTAGATGCAAATATAGATGTGCAGTCATAGAAGATTGGACAAAAATAGAAATGGTCACATCAGACAAAAAGTGCAAGTATCACACAGAGGATTAAGTAGTAAAAAGTTGCCATAGATGGTTTGGCTATGCCTTGCATAAACCTGCAAACACTATTCCGCACGTACAGCGTTGTGGTGATTGAAGATGCTATAAAAAGAGATCAGGTTGAACTAAAATCACGTGGAAGAAAATTGCTTTAAAAGTAGTATAATCCTTCTGTATCAATGCGGATTTATCTAAGAATATAGAACAAAAGATCTATAAGAGATACGAATTAGCTAGACTAAGCCTTAGTCATTGCTACACTAGCTTTAGCTTCAAATAGGGATTGGTCTGAAGTTTGAAGAACTTATAGTTTTAGGGACTCCTAGTTTACCATAAAAGATATAATAATATCAAATTGAGATGGACCAAATACAGCAAGATATCTAGAACATTTATATCATTGACTCCTGCAGTTAGAGATTGAGGTATAGTTAATTAAATTGCCTGATGTTCTTATTACTTTATAGTAAATATACAAACTTTTCTCAAAATATACGGAGAGATAATATGTAAGAAATGGTTAACTGAATAAGTGATCAAATAAAATGTTATTCTTTTCTGATTTATGTGCTCTTATGCATCTATTCCTAATACTTGTAATGTTATACATTACTGAATTTGGTAATACTACATAATTAATGTTGATATTGTGAATACTGAGAGTAAAAGTGAAAACCAAACACTAAACAACTAATGCAGAATTTAGTTGGGGGTTTATTTTGAAAAATATGGATCTCCCAAACGACCTCTTACTTTTATCCTAATGATGTAATCCTTTGCACAATAAGCCAAATAATGTTATACTTTTTATCCCACTTGCCTCACCTGCAATCCACAGACTGAACGACCTCAGTGTCTGATCTCTAGTCCTTGCAGTTCCTTGACCATTATTTTTTTCATGGACTTGCAGATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCATGTAAGCACCCATATTTGTTACATATTAGTTAAGATGTTCGAGTAAGAAATACCGACTCTTCCTCTTTCCTCTAATGCCTTCCCTTCAAATCTCCAAAAGGCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTGGTATGCATCGTTGTGATTTCCATCTTTGATTTGCTTCTATTTCATTGTATTAAACCGTCAATTCATGTAAAGTTTTTATTCACTACAAAAAATTTGGTGCATTGTTCCAGATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAAGTAATCTTTCTTTTCTATTGTTTTATCTAGGTTATTTAAAATTATGTCTACGTTGACTCATAAAAAAAGATGAACTCCACCTTGTAACTTTATTATTTCTTGTCTTGTTGTTATCTCTAAATGTTGCAATAGGCCACTCCAAGTGCAAATTTGTCAAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCGATGGCGTATGTTCCTATTCAAATCTCTCTTTTACTTATTTAAGTTTCACTGATTTCATGAAAGTTTCTCTGTTTGGTGGCAAGAACTTTCTGGTATTGACTAGGAACACCTGCGTACGTGTCTTCCCCTAACGAGAGTCAGATTCTTGTAAAGAGGGTCTAGAGTTGCTTGACAACTCTATTTGTTCCACTTTATGTGACCATATCTCCTTTATAGTCCTCACAAAAAGAAAGACTTCCTAAACCTGGAAGTAATTTAATAAACTTTCCATTTTACCCTTGATGAGAAGCTTTGGTAGCCACACAAATGTTATAACATGTTTAAGAGCACAAGTCCCAATTCTTTTCTTTCGTGAACACTCTGCACAATTAAATAAATTCATGTAAATCAAAATGGAGCGAAAATATTTTGACAGGTTTTCGCAATACGGAATACCTTTTTCTGCATGTGTTGTCACATGCCACATCTGGAAATTAACACATGCTGCATAGTGGCCAAGATTGTGCAATCTTGATAACGTTTTGAATATAAAGTTTCCATGCACCTAATATTGAAGTGAACTACTTGTCAAAATAATGTATTGAAGTGAACTTGCCCCACTCAGTATATCAGTAGAAGATATTGTTATAAAACATAAGAGGACTTCTATTTTTTATCGCTGGTCCTATACACCTTATCTGCATATCTTTCTTTGTGTGGTTACTGGGTTTTGAGGAATTTGTTTCACTTCTGCAGCTATGCTGGTGCCATCTTCGCGGA-TGCTTGCTTGAA-GGGAC-TGAATGGGGTTCCA-GATG-TTGTAGAGTGTTCATTCGTACAATCGAC-TGTGACAG-ACCTGCCAT-TCTTTGCATCCAAGGTAATGATATCGGCTTCTAACCTAAATGGTGCTTGAGTCCCTATTTTCTATTAAATGTATTTGTCTTACCATCACTCGATTTTGCATCTGTGTGGAAGGATGTTCATGTTGGGTCAGTCGATGACATTATTTTCAACTGTGAGAACAATTTGATTATCCTTCTCACAACGAGTGTATAAAATGGGAGATTTAGGACGTAAGAAAAGATAAAAACTACCAAATTTTGTTGGTTATCGTTCTTCTGATTTCAGCACTTGTTTAACTCTCTTCAGG-TGAGACTTGGGAAAAATGGTGTGGAAGAAGTGTTAGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAACTGAAATCGTCCATTGAGAAAGGAATCAAATTTGCCAACGCCTAA</genome_strand>
        <mrna_strand>ATTTTCGACTTCACATTTTTCTCCGCCATAGCAATGAGGACATCCATGTTGAGAACTCTGGCTCGCAGAACCTCAACCGCCGG---AACACGCCGGGGATTCGCATCGGAGTCTGCTCCGGACAGGAAAGTTGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCGCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCTGGAACTCCTGGTGTTGCCGCTGATGTCAGCCACATCAACACCAGATCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGAAAGCCTGGTATGACCCGTGATGATCTGTTCAACATTAACGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCAT...................................................................................................GCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGATGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAATGTTGCTG..............................................................................................................ATGTCATTGTCCCCGTTGTTGGTGGTCACGCTGGCGTAACTATCCTCCCGTTATTTTCCCAA....................................................................................................................................GCCACTCCAAGTGCAAATTTGTCAAGTGAAGAAATTGAGGCACTCACCAAGCGCACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCGATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGCTGGTGCCATCTTTGCAGATTGCTTGCTTGAATGGGACTTGAATGGGGTTCCAGGATGTTTGTACAGTTGTCATTCGTACAGTCAACTTGTGACAGAACCTGCCATCTCTTTGCATCCAAG................................................................................................................................................................................................................................................................................GTTGAGATTCGGGAAAAATGGCGTGGAAGAAGTCTTGGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAGCTGAAATCGTCCATTGAGAAAGGAATCAAATTTGCCAATGCCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E589181" ref_strand="+" ref_description="SGN-E589181 [42749]">
      <seq>tttcgacttcacatttttctccgccatagcaatgaggacatcgatgttgagaactctggctcgcagaacctcaaccgccggcacacgccgggaattcgcatcggagtctgctccggacaggaaagttgctattttaggtgcagctggagggatcgggcagccgctgtcacttctcatgaaactgaatcctttagtttccagacttgcactctacgatattgctggaactcctggtgttgccgctgatgtcagccacatcaacaccagatctgagattttgggttatgcaggagaagaacaactagggaaggctttggagggagctgatgttgtcattattccggctggtgtgccacgaaagcctggtatgacccgtgatgatctgttcaacattaacgctggtattgttaagtctctttgcacagctattgcaaagtattgccctcatgcacttgtcaatgtgatcagcaaccccgtgaattccactgtcccaattgcatcggaggtgttcaagaaggctggaacctatgatgagaagagactctttggagtgaccacacttgatgttgttagggcaaagactttctatgctggaaaagctaaagttaatgttgctgatgtcattgtccccgttgttggtggtcacgctggcgtaactatcctcccgttattttcccaagccactccaagtgcaaatttgtcaaagtgaagaaattgaggcactcaccaagcgcacccaagatggtggcactgaagttgtggaggccaaagcctggaaagggttcagcaccctctcgatggcctatgctggctgccaatcttcgcggaatgcttggcttgaagggactgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10146" stop="14545"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10446" g_stop="10721" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="274" r_length="274" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10722" i_stop="12602" i_length="1881">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12603" g_stop="12776" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="275" r_stop="448" r_length="174" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12777" i_stop="12875" i_length="99">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12876" g_stop="13044" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="617" r_length="169" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13045" i_stop="13154" i_length="110">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13155" g_stop="13216" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="618" r_stop="679" r_length="62" r_score="0.952"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13217" i_stop="13348" i_length="132">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13349" g_stop="13470" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="680" r_stop="802" r_length="123" r_score="0.918"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="13471" i_stop="14200" i_length="730">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14201" g_stop="14246" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="803" r_stop="852" r_length="50" r_score="0.804"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E589181" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>849</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10446" e_stop="10721"/>
          <exon e_start="12603" e_stop="12776"/>
          <exon e_start="12876" e_stop="13044"/>
          <exon e_start="13155" e_stop="13216"/>
          <exon e_start="13349" e_stop="13470"/>
          <exon e_start="14201" e_stop="14246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCG-CTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAGGTTAATTTCTGTTTTATCTTGTCTGCTCTTCTGATGAATGTGTGGTTTCTCACTCTTTTAAGCCCTAGAATTTTAATTGCTCTGATGTATCAGTGTCGTTTGATGAATTTAGGGACTTGATTTCTGTTTTATGTTGATTACCTGTTATTTTTTTTGAGTTTTCTTTTGATTCCTATTATATACCAGGTATGATGATAAGCTAAATACTAAATAATGATGTAAAGGCATAGAATTATCAGAAAGAAACTCTTATGAAATTTTATATAAGCGTTTGTTGTAGATGACTTCAATATTCAATGGAAAATACTTCACATACTCCAGTGATTTTATTATTACTGTGATCCTTGATTCCTTGTGAAATTTTTCAAGGAAAATTTTTATTGGAGTAAAACTACAAAAATGTGAAATATAAATATTACATTTCGCTAGTTAAGATGACAACTTTACTTTACTAACAAGGGAGTTGATTGGAATTTGGGTATGGAGAAGCGTTTCACTGAACAAATTTTTAGGATAAGTTGAAGTAAGACGTAATATATATCCAAGTTTAGCTCTCCTACCATAAGGACGAAGGTGAAGAGAGATTGGATAAAATTGTGCTGTCACTTAATCTCTTGAAGAGAATAATGTGATAGACAAAAATATAGTAGATTGGTTGATAGAAATATATTGATTGAAGTGCTCAATCTTTTGAAGTGAATGGCGTGAATAGACGAAAATATAGTAGATTGATTGAATTTTAGTGATGGAAGTGAAAGATTGCTTCGAGATTCCTACTTGAGAAGGTAAATTTATAAAATGGTTGTGAGATCAACAATGTGATATGGGGTGAACTTTGGGTCTCAAAATGCTTATCATATCCACAAGATTAACTGTCATTGAAACTTTAGATGCAAATATAGATGTGCAGTCATAGAAGATTGGACAAAAATAGAAATGGTCACATCAGACAAAAAGTGCAAGTATCACACAGAGGATTAAGTAGTAAAAAGTTGCCATAGATGGTTTGGCTATGCCTTGCATAAACCTGCAAACACTATTCCGCACGTACAGCGTTGTGGTGATTGAAGATGCTATAAAAAGAGATCAGGTTGAACTAAAATCACGTGGAAGAAAATTGCTTTAAAAGTAGTATAATCCTTCTGTATCAATGCGGATTTATCTAAGAATATAGAACAAAAGATCTATAAGAGATACGAATTAGCTAGACTAAGCCTTAGTCATTGCTACACTAGCTTTAGCTTCAAATAGGGATTGGTCTGAAGTTTGAAGAACTTATAGTTTTAGGGACTCCTAGTTTACCATAAAAGATATAATAATATCAAATTGAGATGGACCAAATACAGCAAGATATCTAGAACATTTATATCATTGACTCCTGCAGTTAGAGATTGAGGTATAGTTAATTAAATTGCCTGATGTTCTTATTACTTTATAGTAAATATACAAACTTTTCTCAAAATATACGGAGAGATAATATGTAAGAAATGGTTAACTGAATAAGTGATCAAATAAAATGTTATTCTTTTCTGATTTATGTGCTCTTATGCATCTATTCCTAATACTTGTAATGTTATACATTACTGAATTTGGTAATACTACATAATTAATGTTGATATTGTGAATACTGAGAGTAAAAGTGAAAACCAAACACTAAACAACTAATGCAGAATTTAGTTGGGGGTTTATTTTGAAAAATATGGATCTCCCAAACGACCTCTTACTTTTATCCTAATGATGTAATCCTTTGCACAATAAGCCAAATAATGTTATACTTTTTATCCCACTTGCCTCACCTGCAATCCACAGACTGAACGACCTCAGTGTCTGATCTCTAGTCCTTGCAGTTCCTTGACCATTATTTTTTTCATGGACTTGCAGATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCATGTAAGCACCCATATTTGTTACATATTAGTTAAGATGTTCGAGTAAGAAATACCGACTCTTCCTCTTTCCTCTAATGCCTTCCCTTCAAATCTCCAAAAGGCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTGGTATGCATCGTTGTGATTTCCATCTTTGATTTGCTTCTATTTCATTGTATTAAACCGTCAATTCATGTAAAGTTTTTATTCACTACAAAAAATTTGGTGCATTGTTCCAGATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAAGTAATCTTTCTTTTCTATTGTTTTATCTAGGTTATTTAAAATTATGTCTACGTTGACTCATAAAAAAAGATGAACTCCACCTTGTAACTTTATTATTTCTTGTCTTGTTGTTATCTCTAAATGTTGCAATAGGCCACTCCAAGTGCAAATTTGTC-AAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGC-TGGAAAGGGTTCAGCCACCCTCTCGATGGCGTATGTTCCTATTCAAATCTCTCTTTTACTTATTTAAGTTTCACTGATTTCATGAAAGTTTCTCTGTTTGGTGGCAAGAACTTTCTGGTATTGACTAGGAACACCTGCGTACGTGTCTTCCCCTAACGAGAGTCAGATTCTTGTAAAGAGGGTCTAGAGTTGCTTGACAACTCTATTTGTTCCACTTTATGTGACCATATCTCCTTTATAGTCCTCACAAAAAGAAAGACTTCCTAAACCTGGAAGTAATTTAATAAACTTTCCATTTTACCCTTGATGAGAAGCTTTGGTAGCCACACAAATGTTATAACATGTTTAAGAGCACAAGTCCCAATTCTTTTCTTTCGTGAACACTCTGCACAATTAAATAAATTCATGTAAATCAAAATGGAGCGAAAATATTTTGACAGGTTTTCGCAATACGGAATACCTTTTTCTGCATGTGTTGTCACATGCCACATCTGGAAATTAACACATGCTGCATAGTGGCCAAGATTGTGCAATCTTGATAACGTTTTGAATATAAAGTTTCCATGCACCTAATATTGAAGTGAACTACTTGTCAAAATAATGTATTGAAGTGAACTTGCCCCACTCAGTATATCAGTAGAAGATATTGTTATAAAACATAAGAGGACTTCTATTTTTTATCGCTGGTCCTATACACCTTATCTGCATATCTTTCTTTGTGTGGTTACTGGGTTTTGAGGAATTTGTTTCACTTCTGCAGCTATGCTGG-TGCC-ATCTTCGCGG-ATGCTT-GCTTGAAGGGACTGAAT</genome_strand>
        <mrna_strand>TTTCGACTTCACATTTTTCTCCGCCATAGCAATGAGGACATCGATGTTGAGAACTCTGGCTCGCAGAACCTCAACCGCCGG---CACACGCCGGGAATTCGCATCGGAGTCTGCTCCGGACAGGAAAGTTGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCGCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCTGGAACTCCTGGTGTTGCCGCTGATGTCAGCCACATCAACACCAGATCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGGTTATGCAGGAGAAGAACAACTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCGGCTGGTGTGCCACGAAAGCCTGGTATGACCCGTGATGATCTGTTCAACATTAACGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCAT...................................................................................................GCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCGGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGATGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAATGTTGCTG..............................................................................................................ATGTCATTGTCCCCGTTGTTGGTGGTCACGCTGGCGTAACTATCCTCCCGTTATTTTCCCAA....................................................................................................................................GCCACTCCAAGTGCAAATTTGTCAAAGTGAAGAAATTGAGGCACTCACCAAGCGCACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAAGCCTGGAAAGGGTTCAG-CACCCTCTCGATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGCTGGCTGCCAATCTTCGCGGAATGCTTGGCTTGAAGGGACTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E286644" ref_strand="+" ref_description="SGN-E286644 [cLES-12-H17]">
      <seq>cgcttcaggtttttctccgacatagcaatgaggacatccgtggtgagattactggctcgcagaacctcaaccgccggcctcacacgccggggatttgcatcggaatctgctccggacaggaaagtcgctattttaggtgcagctggagggatcgggcagcctctgtcacttctcatgaaactgaatcctttagtttccagacttgcactctacgatattgccggaactcctggtgttgccgctgatgtcagccatatcaacaccagatctgagattttgggttatgcaggagaagaacagctagggaaggctttggagggagctgatgttgtcattattccagctggtgtgccacggaaacctggtatgacccgtgatgatctgttcaacattaatgctggtattgttaagtctctttgcacagctattgcaaagtattgccctcatgcacttgtcaatgtgatcagcaaccccgtgaattccactgtcccaattgcatctgaggtgttcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10149" stop="13240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="10449" g_stop="10721" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="10722" i_stop="12602" i_length="1881">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12603" g_stop="12776" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="447" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12777" i_stop="12875" i_length="99">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12876" g_stop="12940" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="512" r_length="65" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E286644" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="10449" e_stop="10721"/>
          <exon e_start="12603" e_stop="12776"/>
          <exon e_start="12876" e_stop="12940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAGGTTAATTTCTGTTTTATCTTGTCTGCTCTTCTGATGAATGTGTGGTTTCTCACTCTTTTAAGCCCTAGAATTTTAATTGCTCTGATGTATCAGTGTCGTTTGATGAATTTAGGGACTTGATTTCTGTTTTATGTTGATTACCTGTTATTTTTTTTGAGTTTTCTTTTGATTCCTATTATATACCAGGTATGATGATAAGCTAAATACTAAATAATGATGTAAAGGCATAGAATTATCAGAAAGAAACTCTTATGAAATTTTATATAAGCGTTTGTTGTAGATGACTTCAATATTCAATGGAAAATACTTCACATACTCCAGTGATTTTATTATTACTGTGATCCTTGATTCCTTGTGAAATTTTTCAAGGAAAATTTTTATTGGAGTAAAACTACAAAAATGTGAAATATAAATATTACATTTCGCTAGTTAAGATGACAACTTTACTTTACTAACAAGGGAGTTGATTGGAATTTGGGTATGGAGAAGCGTTTCACTGAACAAATTTTTAGGATAAGTTGAAGTAAGACGTAATATATATCCAAGTTTAGCTCTCCTACCATAAGGACGAAGGTGAAGAGAGATTGGATAAAATTGTGCTGTCACTTAATCTCTTGAAGAGAATAATGTGATAGACAAAAATATAGTAGATTGGTTGATAGAAATATATTGATTGAAGTGCTCAATCTTTTGAAGTGAATGGCGTGAATAGACGAAAATATAGTAGATTGATTGAATTTTAGTGATGGAAGTGAAAGATTGCTTCGAGATTCCTACTTGAGAAGGTAAATTTATAAAATGGTTGTGAGATCAACAATGTGATATGGGGTGAACTTTGGGTCTCAAAATGCTTATCATATCCACAAGATTAACTGTCATTGAAACTTTAGATGCAAATATAGATGTGCAGTCATAGAAGATTGGACAAAAATAGAAATGGTCACATCAGACAAAAAGTGCAAGTATCACACAGAGGATTAAGTAGTAAAAAGTTGCCATAGATGGTTTGGCTATGCCTTGCATAAACCTGCAAACACTATTCCGCACGTACAGCGTTGTGGTGATTGAAGATGCTATAAAAAGAGATCAGGTTGAACTAAAATCACGTGGAAGAAAATTGCTTTAAAAGTAGTATAATCCTTCTGTATCAATGCGGATTTATCTAAGAATATAGAACAAAAGATCTATAAGAGATACGAATTAGCTAGACTAAGCCTTAGTCATTGCTACACTAGCTTTAGCTTCAAATAGGGATTGGTCTGAAGTTTGAAGAACTTATAGTTTTAGGGACTCCTAGTTTACCATAAAAGATATAATAATATCAAATTGAGATGGACCAAATACAGCAAGATATCTAGAACATTTATATCATTGACTCCTGCAGTTAGAGATTGAGGTATAGTTAATTAAATTGCCTGATGTTCTTATTACTTTATAGTAAATATACAAACTTTTCTCAAAATATACGGAGAGATAATATGTAAGAAATGGTTAACTGAATAAGTGATCAAATAAAATGTTATTCTTTTCTGATTTATGTGCTCTTATGCATCTATTCCTAATACTTGTAATGTTATACATTACTGAATTTGGTAATACTACATAATTAATGTTGATATTGTGAATACTGAGAGTAAAAGTGAAAACCAAACACTAAACAACTAATGCAGAATTTAGTTGGGGGTTTATTTTGAAAAATATGGATCTCCCAAACGACCTCTTACTTTTATCCTAATGATGTAATCCTTTGCACAATAAGCCAAATAATGTTATACTTTTTATCCCACTTGCCTCACCTGCAATCCACAGACTGAACGACCTCAGTGTCTGATCTCTAGTCCTTGCAGTTCCTTGACCATTATTTTTTTCATGGACTTGCAGATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCATGTAAGCACCCATATTTGTTACATATTAGTTAAGATGTTCGAGTAAGAAATACCGACTCTTCCTCTTTCCTCTAATGCCTTCCCTTCAAATCTCCAAAAGGCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAA</genome_strand>
        <mrna_strand>CGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCAT...................................................................................................GCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E214620" ref_strand="+" ref_description="SGN-E214620 [cLEC-79-M11]">
      <seq>ccaattgcatctgaggtgttcaagaaggctggaacctatgatgagaagagactctttggagtgaccacacttgacgttgttagggcaaagactttctatgctggaaaagctaaagttaacgttgctgatgtcaatgtccctgttgttggtggtcatgctggcgtaactatcctcccgttattttcccaagccactccaagtgcaaatttgtcaagtgaagacattcaggcacttaccaagcgtacccaagatggtggcactgaagttgtggaggccaaggctggaaagggttcagccaccctctcgatggcctatgctggtgccatcttcgcggatgcttgcttgaagggactgaatggggttccagatgttgtagagtgttcattcgtacaatcgactgtgacagacctgccattctttgcatccaaggtgagacttgggaaaaatggtgtggaagaagtgttgggattaggcgcactttcagactacgagaaagaaggacttgaagctcttaaaccagaactgaaatcgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12618" stop="14994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12918" g_stop="13044" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="127" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13045" i_stop="13154" i_length="110">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13155" g_stop="13216" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="128" r_stop="189" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13217" i_stop="13348" i_length="132">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13349" g_stop="13470" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="311" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13471" i_stop="14200" i_length="730">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14201" g_stop="14318" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="429" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14319" i_stop="14590" i_length="272">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14591" g_stop="14694" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="430" r_stop="533" r_length="104" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E214620" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214620" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12918" e_stop="13044"/>
          <exon e_start="13155" e_stop="13216"/>
          <exon e_start="13349" e_stop="13470"/>
          <exon e_start="14201" e_stop="14318"/>
          <exon e_start="14591" e_stop="14694"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTGGTATGCATCGTTGTGATTTCCATCTTTGATTTGCTTCTATTTCATTGTATTAAACCGTCAATTCATGTAAAGTTTTTATTCACTACAAAAAATTTGGTGCATTGTTCCAGATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAAGTAATCTTTCTTTTCTATTGTTTTATCTAGGTTATTTAAAATTATGTCTACGTTGACTCATAAAAAAAGATGAACTCCACCTTGTAACTTTATTATTTCTTGTCTTGTTGTTATCTCTAAATGTTGCAATAGGCCACTCCAAGTGCAAATTTGTCAAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCGATGGCGTATGTTCCTATTCAAATCTCTCTTTTACTTATTTAAGTTTCACTGATTTCATGAAAGTTTCTCTGTTTGGTGGCAAGAACTTTCTGGTATTGACTAGGAACACCTGCGTACGTGTCTTCCCCTAACGAGAGTCAGATTCTTGTAAAGAGGGTCTAGAGTTGCTTGACAACTCTATTTGTTCCACTTTATGTGACCATATCTCCTTTATAGTCCTCACAAAAAGAAAGACTTCCTAAACCTGGAAGTAATTTAATAAACTTTCCATTTTACCCTTGATGAGAAGCTTTGGTAGCCACACAAATGTTATAACATGTTTAAGAGCACAAGTCCCAATTCTTTTCTTTCGTGAACACTCTGCACAATTAAATAAATTCATGTAAATCAAAATGGAGCGAAAATATTTTGACAGGTTTTCGCAATACGGAATACCTTTTTCTGCATGTGTTGTCACATGCCACATCTGGAAATTAACACATGCTGCATAGTGGCCAAGATTGTGCAATCTTGATAACGTTTTGAATATAAAGTTTCCATGCACCTAATATTGAAGTGAACTACTTGTCAAAATAATGTATTGAAGTGAACTTGCCCCACTCAGTATATCAGTAGAAGATATTGTTATAAAACATAAGAGGACTTCTATTTTTTATCGCTGGTCCTATACACCTTATCTGCATATCTTTCTTTGTGTGGTTACTGGGTTTTGAGGAATTTGTTTCACTTCTGCAGCTATGCTGGTGCCATCTTCGCGGATGCTTGCTTGAAGGGACTGAATGGGGTTCCAGATGTTGTAGAGTGTTCATTCGTACAATCGACTGTGACAGACCTGCCATTCTTTGCATCCAAGGTAATGATATCGGCTTCTAACCTAAATGGTGCTTGAGTCCCTATTTTCTATTAAATGTATTTGTCTTACCATCACTCGATTTTGCATCTGTGTGGAAGGATGTTCATGTTGGGTCAGTCGATGACATTATTTTCAACTGTGAGAACAATTTGATTATCCTTCTCACAACGAGTGTATAAAATGGGAGATTTAGGACGTAAGAAAAGATAAAAACTACCAAATTTTGTTGGTTATCGTTCTTCTGATTTCAGCACTTGTTTAACTCTCTTCAGGTGAGACTTGGGAAAAATGGTGTGGAAGAAGTGTTAGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAACTGAAATCGTC</genome_strand>
        <mrna_strand>CCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTG..............................................................................................................ATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAA....................................................................................................................................GCCACTCCAAGTGCAAATTTGTCAAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCGATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGCTGGTGCCATCTTCGCGGATGCTTGCTTGAAGGGACTGAATGGGGTTCCAGATGTTGTAGAGTGTTCATTCGTACAATCGACTGTGACAGACCTGCCATTCTTTGCATCCAAG................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGTGTGGAAGAAGTGTTGGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAACTGAAATCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E346824" ref_strand="+" ref_description="SGN-E346824 [cTOF-32-F13]">
      <seq>ctctttggagtgaccacacttgacgttgttagggcaaagactttctatgctggaaaagctaaagttaacgttgctgatgtcaatgtccctgttgttggtggtcatgctggcgtaactatcctcccgttattttcccaagccactccaagtgcaaatttgtcaagtgaagacattcaggcacttaccaagcgtacccaagatggtggcactgaagttgtggaggccaaggctggaaagggttcagccaccctctcgatggcctatgctggtgccatcttcgcggatgcttgcttgaagggactgaatggggttccagatgttgtagagtgttcattcgtacaatcgactgtgacagacctgccattctttgcatccaaggtgagacttgggaaaaatggtgtggaagaagtgttgggattaggcgcactttcagactacgagaaagaaggacttgaagctcttaaaccagaactgaaatcgtccattgagaaaggaatcttttttgccaacgcctaaattaattaaacataaaaagaaaatgatactttgaagttttgccatccccattttcagatacatttgagttaatattttgcgagctcctcactgcctgaggcattagatttatagcttttatagtctaagatagtagaggtgttagatatatagccatatattttggtagaaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12669" stop="15202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12969" g_stop="13044" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13045" i_stop="13154" i_length="110">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13155" g_stop="13216" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="138" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13217" i_stop="13348" i_length="132">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13349" g_stop="13470" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="260" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="13471" i_stop="14200" i_length="730">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14201" g_stop="14318" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="261" r_stop="378" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="14319" i_stop="14590" i_length="272">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="14591" g_stop="14902" g_length="312"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="690" r_length="312" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E346824" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346824" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12969" e_stop="13044"/>
          <exon e_start="13155" e_stop="13216"/>
          <exon e_start="13349" e_stop="13470"/>
          <exon e_start="14201" e_stop="14318"/>
          <exon e_start="14591" e_stop="14902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTGGTATGCATCGTTGTGATTTCCATCTTTGATTTGCTTCTATTTCATTGTATTAAACCGTCAATTCATGTAAAGTTTTTATTCACTACAAAAAATTTGGTGCATTGTTCCAGATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAAGTAATCTTTCTTTTCTATTGTTTTATCTAGGTTATTTAAAATTATGTCTACGTTGACTCATAAAAAAAGATGAACTCCACCTTGTAACTTTATTATTTCTTGTCTTGTTGTTATCTCTAAATGTTGCAATAGGCCACTCCAAGTGCAAATTTGTCAAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCGATGGCGTATGTTCCTATTCAAATCTCTCTTTTACTTATTTAAGTTTCACTGATTTCATGAAAGTTTCTCTGTTTGGTGGCAAGAACTTTCTGGTATTGACTAGGAACACCTGCGTACGTGTCTTCCCCTAACGAGAGTCAGATTCTTGTAAAGAGGGTCTAGAGTTGCTTGACAACTCTATTTGTTCCACTTTATGTGACCATATCTCCTTTATAGTCCTCACAAAAAGAAAGACTTCCTAAACCTGGAAGTAATTTAATAAACTTTCCATTTTACCCTTGATGAGAAGCTTTGGTAGCCACACAAATGTTATAACATGTTTAAGAGCACAAGTCCCAATTCTTTTCTTTCGTGAACACTCTGCACAATTAAATAAATTCATGTAAATCAAAATGGAGCGAAAATATTTTGACAGGTTTTCGCAATACGGAATACCTTTTTCTGCATGTGTTGTCACATGCCACATCTGGAAATTAACACATGCTGCATAGTGGCCAAGATTGTGCAATCTTGATAACGTTTTGAATATAAAGTTTCCATGCACCTAATATTGAAGTGAACTACTTGTCAAAATAATGTATTGAAGTGAACTTGCCCCACTCAGTATATCAGTAGAAGATATTGTTATAAAACATAAGAGGACTTCTATTTTTTATCGCTGGTCCTATACACCTTATCTGCATATCTTTCTTTGTGTGGTTACTGGGTTTTGAGGAATTTGTTTCACTTCTGCAGCTATGCTGGTGCCATCTTCGCGGATGCTTGCTTGAAGGGACTGAATGGGGTTCCAGATGTTGTAGAGTGTTCATTCGTACAATCGACTGTGACAGACCTGCCATTCTTTGCATCCAAGGTAATGATATCGGCTTCTAACCTAAATGGTGCTTGAGTCCCTATTTTCTATTAAATGTATTTGTCTTACCATCACTCGATTTTGCATCTGTGTGGAAGGATGTTCATGTTGGGTCAGTCGATGACATTATTTTCAACTGTGAGAACAATTTGATTATCCTTCTCACAACGAGTGTATAAAATGGGAGATTTAGGACGTAAGAAAAGATAAAAACTACCAAATTTTGTTGGTTATCGTTCTTCTGATTTCAGCACTTGTTTAACTCTCTTCAGGTGAGACTTGGGAAAAATGGTGTGGAAGAAGTGTTAGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAACTGAAATCGTCCATTGAGAAAGGAATCAAATTTGCCAACGCCTAAATTAATTAAACATAAAAAGAAAATGATACTTTGAAGTTTTGCCATCCCCATTTTCAGATACATTTGAGTTAATATTTTGCGAGCTCCTCACTGCCTGAGGCATTAGATTTATAGCTTTTATAGTCTAAGATAGTAGAGGTGTTAGATATATAGCCATATATTTTGGTAGAAAAT</genome_strand>
        <mrna_strand>CTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTG..............................................................................................................ATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAA....................................................................................................................................GCCACTCCAAGTGCAAATTTGTCAAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCGATGGC..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTATGCTGGTGCCATCTTCGCGGATGCTTGCTTGAAGGGACTGAATGGGGTTCCAGATGTTGTAGAGTGTTCATTCGTACAATCGACTGTGACAGACCTGCCATTCTTTGCATCCAAG................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGTGTGGAAGAAGTGTTGGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAACTGAAATCGTCCATTGAGAAAGGAATCTTTTTTGCCAACGCCTAAATTAATTAAACATAAAAAGAAAATGATACTTTGAAGTTTTGCCATCCCCATTTTCAGATACATTTGAGTTAATATTTTGCGAGCTCCTCACTGCCTGAGGCATTAGATTTATAGCTTTTATAGTCTAAGATAGTAGAGGTGTTAGATATATAGCCATATATTTTGGTAGAAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E357670" ref_strand="+" ref_description="SGN-E357670 [cTOS-24-I12]">
      <seq>ttcgcggatgcttgcttgaagggactgaatggggttccagatgttgtagagtgttcattcgtacaatcgactgtgacagacctgccattctttgcatccaaggtgagacttgggaaaaatggtgtggaagaagtgttgggattaggcgcactttcagactacgagaaagaaggacttgaagctcttaaaccagaactgaaatcgtccattgagaaaggaatcaaatttgccaacgcctaaattaattaaacataaaaagaaaatgatactttgaagttttgccatccccattttcagatacatttgagttaatattttgcgagctcctcactgcctgaggcattagatttatagcttttatagtctaagatagtagaggtgttagatatatagccatatattttggtagaaaataatcattggcagacttgtgatgggtgcattttctttaaataatctacaaacgttgaaccttctacttcatttattacacatgcagatatatttggttaaaagtagtaaattgggttttcttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="13917" stop="15327"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14217" g_stop="14318" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14319" i_stop="14590" i_length="272">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14591" g_stop="15032" g_length="442"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="544" r_length="442" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E357670" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>544</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E357670" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14217" e_stop="14318"/>
          <exon e_start="14591" e_stop="15032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGCGGATGCTTGCTTGAAGGGACTGAATGGGGTTCCAGATGTTGTAGAGTGTTCATTCGTACAATCGACTGTGACAGACCTGCCATTCTTTGCATCCAAGGTAATGATATCGGCTTCTAACCTAAATGGTGCTTGAGTCCCTATTTTCTATTAAATGTATTTGTCTTACCATCACTCGATTTTGCATCTGTGTGGAAGGATGTTCATGTTGGGTCAGTCGATGACATTATTTTCAACTGTGAGAACAATTTGATTATCCTTCTCACAACGAGTGTATAAAATGGGAGATTTAGGACGTAAGAAAAGATAAAAACTACCAAATTTTGTTGGTTATCGTTCTTCTGATTTCAGCACTTGTTTAACTCTCTTCAGGTGAGACTTGGGAAAAATGGTGTGGAAGAAGTGTTAGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAACTGAAATCGTCCATTGAGAAAGGAATCAAATTTGCCAACGCCTAAATTAATTAAACATAAAAAGAAAATGATACTTTGAAGTTTTGCCATCCCCATTTTCAGATACATTTGAGTTAATATTTTGCGAGCTCCTCACTGCCTGAGGCATTAGATTTATAGCTTTTATAGTCTAAGATAGTAGAGGTGTTAGATATATAGCCATATATTTTGGTAGAAAATAATCATTGGCAGACTTGTGATGGGTGCATTTTCTTTAAATAATCTACAAACGTTGAACCTTCTACTTCATTTATTACACATGCAGATATATTTGGTTAAAAGTAGTAAATTGGGTTTTCTTAATATTCTA</genome_strand>
        <mrna_strand>TTCGCGGATGCTTGCTTGAAGGGACTGAATGGGGTTCCAGATGTTGTAGAGTGTTCATTCGTACAATCGACTGTGACAGACCTGCCATTCTTTGCATCCAAG................................................................................................................................................................................................................................................................................GTGAGACTTGGGAAAAATGGTGTGGAAGAAGTGTTGGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAACTGAAATCGTCCATTGAGAAAGGAATCAAATTTGCCAACGCCTAAATTAATTAAACATAAAAAGAAAATGATACTTTGAAGTTTTGCCATCCCCATTTTCAGATACATTTGAGTTAATATTTTGCGAGCTCCTCACTGCCTGAGGCATTAGATTTATAGCTTTTATAGTCTAAGATAGTAGAGGTGTTAGATATATAGCCATATATTTTGGTAGAAAATAATCATTGGCAGACTTGTGATGGGTGCATTTTCTTTAAATAATCTACAAACGTTGAACCTTCTACTTCATTTATTACACATGCAGATATATTTGGTTAAAAGTAGTAAATTGGGTTTTCTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E276561" ref_strand="-" ref_description="SGN-E276561 [cLEN-17-B17]">
      <seq>aggatcaagaatcatcaaagtgctttatctcgatgattatgaaaaagagtcagacatctcattcttaacattatttatgatgttatttctatacaagtgttattggttatggtagtcgtcatgtgagagatgtagcacctgtaaattgctcatccagttttgcttatacatgtgctgggattttcagtcatagggttgttcacagttagagaagcaggtaggtttgctttgtgcgatgtcgtgcagctggtcttgtagaaaccaagtatgatggtaggaatgcatactgtaaaaattatcagggaatcttaagtggaaatgataatgggggtgtgtacatattaacccattcatcttccgggcgactttttacaaagaatttgtatgtattttcccctgaagtagtagacacaaccatgtccatcccctcttgtatgtccaaaaatgctactctgtatgttgctcttttgacttggaattaatagaatatgaatcctgagggatcttggttgcaaaaaaaaaaaaaaaaaaactcgagactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="21529" stop="22640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21829" g_stop="22340" g_length="512"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="514" polyA_stop="533"/>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E276561" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>512</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276561" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="21829" e_stop="22340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGATCAAGAATCATCAAAGTGCTTTATCTCGATGATTATGAAAAAGAGTCAGACATCTCATTCTTAACATTATTTATGATGTTATTTCTATACAAGTGTTATTGGTTATGGTAGTCGTCATGTGAGAGATGTAGCACCTGTAAATTGCTCATCCAGTTTTGCTTATACATGTGCTGGGATTTTCAGTCATAGGGTTGTTCACAGTTAGAGAAGCAGGTAGGTTTGCTTTGTGCGATGTCGTGCAGCTGGTCTTGTAGAAACCAAGTATGATGGTAGGAATGCATACTGTAAAAATTATCAGGGAATCTTAAGTGGAAATGATAATGGGGGTGTGTACATATTAACCCATTCATCTTCCGGGCGACTTTTTACAAAGAATTTGTATGTATTTTCCCCTGAAGTAGTAGACACAACCATGTCCATCCCCTCTTGTATGTCCAAAAATGCTACTCTGTATGTTGCTCTTTTGACTTGGAATTAATAGAATATGAATCCTGAGGGATCTTGGTTG</genome_strand>
        <mrna_strand>AGGATCAAGAATCATCAAAGTGCTTTATCTCGATGATTATGAAAAAGAGTCAGACATCTCATTCTTAACATTATTTATGATGTTATTTCTATACAAGTGTTATTGGTTATGGTAGTCGTCATGTGAGAGATGTAGCACCTGTAAATTGCTCATCCAGTTTTGCTTATACATGTGCTGGGATTTTCAGTCATAGGGTTGTTCACAGTTAGAGAAGCAGGTAGGTTTGCTTTGTGCGATGTCGTGCAGCTGGTCTTGTAGAAACCAAGTATGATGGTAGGAATGCATACTGTAAAAATTATCAGGGAATCTTAAGTGGAAATGATAATGGGGGTGTGTACATATTAACCCATTCATCTTCCGGGCGACTTTTTACAAAGAATTTGTATGTATTTTCCCCTGAAGTAGTAGACACAACCATGTCCATCCCCTCTTGTATGTCCAAAAATGCTACTCTGTATGTTGCTCTTTTGACTTGGAATTAATAGAATATGAATCCTGAGGGATCTTGGTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E539761" ref_strand="+" ref_description="SGN-E539761 [TUS-59-K24]">
      <seq>tacgtcagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggccaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggttgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgctatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagccttcggggagaaagattattacttgcaaatgggttttcaagaagaaggaagggatatcaccagcagaaggagtcaagtataaagtcagggttgttgctagaggtttcaaccaaagagagggagtggactacaatgagatcttctcaccagtggtcagacatacttccatccgagtgttactagcgatagttgcacatcagaatctggagcttgaaacacttgatgtgaagacagcgtttctacatggagagttggaggaagagatatacatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="35004" stop="36252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35304" g_stop="35952" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E539761" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35304" e_stop="35952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGTCAGAAACTGGGAGTCTTGATAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTGAAAGAACCTGAAGAGAAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATTAGAGTATAGCTCAAGATCGGCCAAGGGGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTACGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGTCGTCTACTTACAAAGAAGCCACTTTAAGTCCTGATTCTGAAAAATGGTTTGCTGCTATGGGAGATGAGATGGAGCCCCTACACAAGAATCAGACATGGGATTTGGTCATACATCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGGAGAGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCTGAGTGTTACTAGCGATAGTTACACATCAGAATCTGGAGCTTGAACAGCTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</genome_strand>
        <mrna_strand>TACGTCAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGTCAGGGTTGTTGCTAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAAACACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E284788" ref_strand="+" ref_description="SGN-E284788 [cLES-3-F2]">
      <seq>acgttagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggtcaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggctgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgatatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagtcttcggggagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="35005" stop="35989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35305" g_stop="35689" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.945"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E284788" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35305" e_stop="35689"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTCAGAAACTGGGAGTCTTGATAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTGAAAGAACCTGAAGAGAAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATTAGAGTATAGCTCAAGATCGGCCAAGGGGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTACGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGTCGTCTACTTACAAAGAAGCCACTTTAAGTCCTGATTCTGAAAAATGGTTTGCTGCTATGGGAGATGAGATGGAGCCCCTACACAAGAATCAGACATGGGATTTGGTCATACATCCTTCGGGGAGAA</genome_strand>
        <mrna_strand>ACGTTAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGTCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGCTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGATATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGTCTTCGGGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E343338" ref_strand="+" ref_description="SGN-E343338 [cTOF-17-N22]">
      <seq>gtttccaagttccagggaaggaaaatcacgtctgcaagttgaagaagtccttatatggacttaagcagtctccaaggcagtggtataaaaggtttgacagctatatggtgaagttgggctatactcggagctcatatgattgttgtgtctactacaataggctcaatgatgattcattcatctatctggtgctttatgtagatgatatgttgatagctgcaaagaagaagtatgacattcagaagctgaagggtttacttagtgctgagtttgagatgaaggatctgggagccgctcggaagattttagggatggagatcattagagacagagagagaaggaaacttttcttgtcacagagaagctacattcagaaggtcttggcgaggtttggcatgtcttcatctaagcccattgatacccccagtgctgccaatatccatctcactgccatgttcgctccacagtcagaagaagagaaggagtatatgtcacgagtcccttatgccagtgccgtaagaagtttgatgtatgctatggtctgtacaaggccagatttagcacatgcagtcagtgtagtgagcagattcatgggacaaccagggagagaacattggcaggctgtgaagagaattttccggtaccttagaggtacatctgacgttggtctcatttatggaggtgatactcagtgcttggttactggctattctgattcagactatgctggagatgttgacacaagaagatcgatgactggctatgtgtttaccctgggaggatctgtcgtcagttggaaggcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="35663" stop="37052"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35963" g_stop="36752" g_length="790"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="808" r_length="808" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E343338" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>790</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="35963" e_stop="36752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTACAAAAGGTTTGACAACTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAAGGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGCTGATAGCTGCAAAGAAGAAGTATGCCATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTC-G-A-A----A--GAT-----TC--TAGGGA-TG-GAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCTATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCATATTCATGGGACAACCAGGGAAAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTTAGTGCTTGGTTACTGGCTATTCTGATTCTGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTTAGTTGGAAGACAACTTT</genome_strand>
        <mrna_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAAGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTGGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E423521" ref_strand="-" ref_description="SGN-E423521 [STM-42-K19]">
      <seq>caattattggtttaacttgtcgagttggtcgtgcaatatctggaagtgcaaactcattgcgagatctagttaaagatggttcttctttgttgctcattggtcctcctggagtaggaaaaacaactattatcagggacatagccaggatgcttgcaaatgattatgggaagcgcgtaatgattgtagacacctctaatgaaattggtggggatggtgatatacctcatgcaggaataggtaatgctcggcggatgcaagttccacataatgatatgcaacacaaggtgctgatagaagcagtggaaaatcagagcgaattggaacaggaacagatttaaggcttcagattctccccttcaccagtgcatctgatgaagacggtcatgatagtgatggagttgatgagagtgaagttgatgaattattattcaggccgaatgctgaatcaaatggatctgcctacactgtgaatagattacctctactacctgaataagaaagtagattgtttgttttaacaccaattgcctttatcagagtgcatcatcttttgtaccatttttaagctattgaacatactctgaagccatcgagtgtaaatacaaatggtaaactacaaattggtgtttttttaatatcaaattatggcccataatcagttatacttgttcaaatgctcagcctcttactgctgcataatgtataaatcagcttttaggaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="59715" stop="41606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59415" g_stop="59283" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="59282" i_stop="56088" i_length="3195">
            <donor d_prob="0.896" d_score="1.00"/>
            <acceptor a_prob="0.934" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56087" g_stop="55937" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="284" r_length="151" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55936" i_stop="55654" i_length="283">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55653" g_stop="55632" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="306" r_length="22" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55631" i_stop="42306" i_length="13326">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42305" g_stop="41907" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="700" r_length="394" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="720" polyA_stop="730"/>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E423521" ref_strand="-">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.966" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E423521" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="59415" e_stop="59283"/>
          <exon e_start="56087" e_stop="55937"/>
          <exon e_start="55653" e_stop="55632"/>
          <exon e_start="42305" e_stop="41907"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTATTGGTTTAACTTGTCGAGTTGGTCGTGCAATATCTGGAAGTGCAAACTCATTGCGAGATCTAGTTAAAGATGGTGCGTCTTTGTTGCTCATTGGTCCTCCTGGAGTAGGAAAAACAACTATTATCAGGTTGGTTGTTACATAGACTCTCATGTCATGCCCTCTGATCTTTGATGTGCAATGTCATGAACTTGAGGAACATTTCTGCTGTTTGACCTGAATCTCCTTCTCATTTTAAAGTTAATCGGTGCCATTACATTTCTGGTTGTCACATTAAAAAGATATATTTTTCTTTGAGAAAAGACATAAAGTGACACCTGAAGTTGTCCCTAATTTTCAAGAAGACACCTTAAGTATGTGGTCCTCCTATAACCCCACAAAAGTAATAAATACCTTTGTTAATAGACAGTTTGACCCGTTTCTTCCCTATGTTTGTTTTCACGTAGATGACGCGAGTGAATGAGAAACTTTGCTTCCAAAAATGAATTAAAAACCTCCACTTGTCAGTTTTTTTCTGTTATTTAATTATTTCCTCTTTAATTTTTTCGAAAAAGCGTTGGTTGAAGGTTTAACAAAAATTATCTTCTCTCTTGAATGAAATCAGCCTAAAAAGGTAAGAACTTTCTAACTACTTACTAATTTCCAGTTCAAGGTTTAATTTCTTTAAAATTTGAGAAATCAAGATATATTTTTTGTGATTAAAATAATTTTGTAAAGTCAAGTTCAATCTTGAATCGTATTTGGAATGATGAGAATGATCCGATATTGGTGTGAAGATGCAATGCAAACATGGAACAATGTTTTGGACGGCGAAAGGCGACAAGAGTCTTGCCTCACCAAAAGATGAGTCGAGCGGCGAGGCGCTCGCCTTTTTGAAGTGCGGCACCAATTAAGACCAACAAATTAAAATATTTAATTGCATATGTAAATAATCAAAATCTCAATAGCAATAACATATTAGCAAATATTTCAATTCAAAAACTGAAAATAGGTAGTACATACCAATAGTCTAGAACTTGAATGAACAAACAAAGTACAAAAGTCAAAACAATGAAAAAAAAAACAAAGGTAGAAGTAACTCTGAAGTCTAAAGAAGAAGAAGGAAAAAGAAAGAAAGGAAGAAGAAGAGAAGAAGAAATTAGCAGAAGAAAAGAAGAAATACGTATTGGTTGGAGTTTGGAGTCGCCAGTAAAGTCTGGCTGATTGCCGAGAAGTCAAGTCAAGTCGACTAGTTGGGGTCACAGTCTAAGAGTGCAACTTTCTAAATTTGGAAAGTAAACCCTAAAATGATCTTTTAACTTTTAAAATCCTAAATTGGTCGCCTTTTTTTAAGAAAACACAAAAGGCGGCGCCTTTCTTGCCTCTGTCGTCGTTGTCTCGATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGCTAAAAAGCAATGAAGGTTCGCCTCACATTGCCTCACCTCTAGCCATTTCCTTTCACAACATTGACATGGAAATTCACTTTCAATACAAATTTCTTGGTGGTCCAGTGCCAATTGAAGCACAATTCTAGTGCCAACAGAACCCAACAAGAATGAACCTCTAATTCATCCCACGACTCTTCGAATTTGCAAAAGGAATTTGCGATCATTGAAGCAATTTCATAGAAGAGTTTGACTGGGCTCAAAAAAAGTATATCTATATCCTTGGAGAAATCTTGTATGATTCATGTAAAATTGACTATGGGGTATGATTCTCCGGTAGTTGATCTATCTATGATCAAAGATTCAGCTCATTCCGCAGTCCCATTGGAAAGATCTCAACAGGCGATTTTCTGTGAGAATCGCCTGCGGATGGGTGGCCCCAGATGTGCCTGCAATTTCAATTACCCTCTGACGAGATTCGAGGGGAATCAATCAATGGGGAATACCCCGATTTCCTAACGTACCTTATACTGAAAGCCCACACAAAATGGACGGCGGAATCATAATCGAGGAGAACTCCGGCGATGGCGATAGAGCTCTGGTGAAATTTTCAGGCAACGAGCAATGCCAAAATGAGCATCAGAATGAACTGAACGCAACACAAGAAAAAGCCCCAATTGGTAAGCTTCCTAACAATTCGAATTTGCAAATTAGGGTTAAGCAAATTGGAGGTCTCAGGCAAAGTAATTATGTCCAATTTTCGGGCAATACTCAAAGCCATCAGGTTCATGATATTTGAGGCCAATATAAGTTTGAATCAAGTTCATACTGTTGAAGCTGCAAGCTCTAATTCCAATGCAGACTTGGTTTTACATTTTGGTAAGCTATACCACACAGATGCTGGCTAGCTTTTTCAAGTTTGGAAGCAGGCAGTGGCTTAGCATACCACACATTTGGTAAGCTTTACCGCACATAGCTTGAAACCAGTAAGTAGTTTGATTCTGGATTTTATATCAGGTCCTTGCCAACCCTTTGAAATTTTCTCATTGGCGCTGCTAGTTTGGTATCTAGATATGGCTTCCTGATGTCTCTTTAATTGAGATATAAGCTGAGACTTCTTGCTTTATCTTCGCTTAAGCTCAATTTTGGACAAGTTCAATGTTACTTGAATACGAAGCTCTCATGAAGCCATGGTTCATGGAATAAAACAGGTTTCTTGGCGTATCCAACAGCAGACTTTTTTTTATTGTTGGTAAAATTAAAGATCCTGGACATAATCAATAATATTAAAGTTTTCCAGTTTTTTCATAATGTAATTCTACTTTTTTTCTTCAACTCTTCCTTTTTTTATGAAGTCTTTGTGGGGTTATTTAGCTTAAACTTTTAGTCCCAGGCTAGTTTAGACAATGCTGCTTGTTACTGTAATTTAGTGGAATGATGTATTTATGAAGTGGTGGGAAAATATCGTGGATTTAGCACTTGGTAGTGGGTTGCATACGGGGCTCTTACAATTATTCTGTGTCTTATTCTGTTGCATTTATTGCAAAGGACAGGTGTGTATTTGTTAACATTTCTTATTCAAGGTATGCTTAGTTGTGTATTTTGACTGTTCCCTTTAGATGTTTGTTTCTTGCATTTCCTTCTCATTGTCCACATTATTGGTTAGCTCTAATGTTATGGAAGTCTGTCTAATGTTTGATTTATCAAGGGTTCAGCTGTCTGTATGTACTAATTATTGTATCCCATGCCATGGTGAACACTTTCTCCTTTCATTTCTCCTTGCACACTGATACACATAAAATCCTGCAGTTATAACTTAGCAATGATAGTTCCTCCGCAATGTGCATGTATCTCCTACCATCCCAATAAGCTATTTCCATGAGATTCAGCAGATGGGTATGTAAGGATTTTTTTCTTTATACTCCTAGGGACATAGCCAGGATGCTTGCAAATGATTATAGGAAGCGCGTAATGATTGTGGACACCTCTAATGAAATTGGTGGGGATGGTGATATACCTCATGCAGGAATTGGTAATGCTCGGCGGATGCAGGTTCCACATAATGATATGCAACACAAGGTAGGAGCTTGACTTTCACTCTGTTAGCCAGATGAAAATAAAATTACTTTTTTGAAAAGGTGTATTGATGCAACCACTGCAATTTCTTATTGGAAGAGACCTTTTATCTTACCCAAATTTAAAGCAAAACTGGGACCACATGTACTTGATTAATAGCTTTCTGAGGATATACCTATTGCTGGTTCTTGGATGGACCTATCCTTCCCTTACATGAGTGGCTCCAAACATGAGTCAACTGGTCATTGATCAACGAGGATTGTTTTTTACTTTAATTTTTTTGTAGGTGCTGATAGAAGCAGTGGAAAATCATATGCCACAAGTGATTGTAATCGATGAGATTGGTACTAAGCTTGAGGCAATGGCTGCAAGCACCATTGCACAACGAGGAATTCAGTTAGTTGCAACTGCTCATGGAGTAACAATAGAGAATTTAGTAATGAATCCTGCTTTAGAGATGCTGGTTGGAGGAGTACAGGTAGTTCCCGTTTAACAGAACTTTTTCCAGTTAGTTGTTACATTTAAAACAATTGGGCTGATGCTTAATTAATGGTGAACAATGCTGTTATGCTACAAACGGGTAAGTACGGTAACTTTGTGTTTTTCCAATAAAACGGGTTAGTAGGTAATAGGACTTCTATTTAGAAAGAAGCTAGTAAACAGTCTAGGGGGATCCCACTGTTCCTAGTTGTACCAGATGTGACTTCTTCTTTCCTTTCATATATCATAAGTAGAACGCAAAATCAATATCATTGCAATGAAGTGAACCAATGCATTCTCTACATAATATATGCAATTGCAACACAAGTAGTGCATGAAGGGTAAAAAAACAAAAACAATTTAATTGAAGTGAACCACTGCATTGTCTATATTTTCTATGTAATTGCAACATGAGCTGTGCATGGAGGGTCAGAGGGTGAAAGTCTTTAACTTGGTTGCCTAACTATTTACTCATGGAGGTGTCTTGACATTGATATCTATAATGGATGAGTCCCAAAAGGTTTTCTCAAAAAAAAAAAAAAAAAAAGAAAGAAAAGTGAAGAGTCTCAAAAGATGATATCAACGTCAAACCCACCCTTCGAAATGATGCCATAATACCATTATAGCATGGAGCGACGTTTTACTCTCATGCACTATTGGATGACTGGAAGCTGTTTGAGGTTTATAGTATAGTTGCATAACTTATTTCTTTGTCAGAGTGTGACACTTGGGGATGAAGAGGCTAGCAGGCGACGCGTTCAGAAATCTGTTCTGGAGAGGAAAGGTCCATCATCTTTTAGCTGTGGGGTTGAGATAATCTCCAAGGCAGAATTGAGAGTTCACCCTGATTTAGAAGCAACAGTAGATGCAATTCTTGCAGGTCTTTTACTAGTCCTCCCTCCTAAATCCTAACAAAACATTTCTGCTGACAAATCATTTGCATATCATCCTGTTGGAAAGCTGATTGAATGTTGTTTAATCGTCTGCCTTGGTGTTAATTTCATGCTGAGAAGGACGTTACCCAAAATATGAAATTCGCAAGATAAATCCAGGATCGCAAGATGGAATTATGGAAATTTCATCCATCCAAGCACCATTAGATGAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTGAGCTCATCTCAGCAACAGGTCCGAGCATGGAAGGAGGTTCTGGTGAAAGTGAGGATGCCCTTTGCATTTTTCTATATGGGGTAAGATGATATTACCATTTACTTGTTCGATAGGAAAAAAGAATGTCATCACTACATTGAATATGTATAAGTTTGGTTAATAACTAAAATCCCAGTCTCAGAATCTGTTCTCTTAGTTCAACTTTAATACCGAGCTAGTATTCGTATTGTTGAAGGGCCTTCGAAAGAGAATCAATTTCCAAAAAGTGAAATACCTCCTAGTACATGATGGTTCTGCATTCGTATACTATTGTTACTTAATTTGCTGCAAAGTTAGTCTCTTTCAATTTGTGGATCTAATAAACCTGATTTGATGCTTCTCCAGTATCCTAATAGTCTCCTTGTTTTCCTATCTTTTCATGTTAAGGTCCCACATACCCCCTTCCTCTGCTGGAAGTGCTTGGTGGCCCCAAACATGAAGTGTAGAAGTATCGAGCAGGAATGATTTTTTTCTTTTGGCTGACTATTCAAATTCAAGCCCCAGCAATTTTTTTTTTTTAAAAAATATTCCTGGAAGAAAAGATCACATGCTTGAATTTTGTCACTCCTTGTATAGGCGGAAAAAGAGTAGATGTTCTTCTATGCTTTAGCTCATTAAGATTTCACCCATTAAAATACTTGTCAAAGACACATTTTAGAATTACAGAGCCTCCTCTTCAAACTTTATATCATCTAATGAAGCATTTGAGTTAATCCACTCTCTTTTCCTTTTAGTTCTCTAAATTTTTTAACTTCTATGAGGGAAAGTGTAGCATAGAATAAGAGATTCTTATGAAGAAAACGTAATAGAAGAGAGGAAAAAACACGATAAAGCTCCATCAGCTTCTATATGGAAACATCTACGTGGAACTCATATTTGAGCAGGTATTGTAGATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAGGTATTTGTTAGAACCAACTTGCAATATCTCCTTATTTGAATGAAAGTTCTGAAGAAAGAAGGAAAAACAAGATGAGTTCTTTTATGCATTATCTGTTGCCTGTGCTGAGTCCGAATTCACTATCCTTGTGTGTATTGAAGTATCTTTTCCTTTTGCAGACTAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGCTTTGAGTTTCTCGAATCTGAAGCTAAAACTAATGAGTCTGAAAAGATTGATGCCTTAGAGGTAATTTCCCGTTGTATTCTTTTTTAGTACTTTTTTTGGAAAATTCAATTTCAAAGACTCTAGCGGCTGACTTCCATAAAGATGATGATGGGCTTTTTGTGATTAACTGGCTTTTAACTACCCTAAAGTTGAGGGTGATTATCCTTAAGTTGGCTTTTAACTTTATGATGAAATACTAATTTTCACTCTCTGGAAAACATGGAGGTTCCAATGAAGTCATTGGCCTGAAATATATGTGCTATACCATTTAGTCATGCTGTGTGAGGACATCTGACGTTTGCAATGGAACAAAAGATAAAGTAGACTTCAACTTAGGATTCACCAAGTCTGTGGTTGAAAAAATTGTGGTCTCATGTCAGTCTAAGAAGGGGATTGGTAAAAGTCGCCGCCATGTGACCACGAGGTCACAATTTCAAACCGTTGAAAGCTCTTGCAGAAATGCAAGGTAAGGCAGCCTATATGAGAGCCAATGGGGTCTGGGCCTTCCCCAGTCTGTGCATAGGGGGAGCTTAGTGGACCTGTCTGTCCTTTTTCTTTTTCATTTTGGACTAGGGCATCAGCTATTTACAATGGAAAAGAGATAAAAATTCATTTCAGACTAAGTGGTGTTTGAATTGGCTTATTTTTAGTGGTTTCTGGCATTTAAGCATTTCTTTAGTTTTGGAAGTGTTTGGGTAGAAGTGTTTTTAAACACTTATTCAAAGCTGAGAAAGTACAAAAAAGAAGCCAAAAGCCAATAGTTGGGGGTTCCCAACTAATGACTTTTGGCTTTTAGTAACTTATAAGCCACTTAAAAAAAGTCAATCCAAACACACCGTAATATTCAAATATGTGTGAAGTGGCTTGTTGTCTAAGGTCTCATCCGAAGGTGGAGTATTCAACAAATATATTATCCTGCTAGCTAGAATCTATAGGAGAATACTGAAGGAGTGTGAACATTTAGATTAAGGTCATCAGGCGCTCTATTGTATTCTGTTAATATCCTGAGGAATTCTCCTTTGGAAATTAGAGAAGCTTAATTAGCCAATAGGTTGGGAAAAAGAACACATCAACCAGCTAATATTCATCCAAAAAAATCAACTGATGCACAAGCCTTTTCTTTTTTCTTATCAGGATATAGAGCGTCACATTTGTACTCGAGTTACTAGAACTTCACTACTGTTAAAACTTAAAACTGAACTGGGATACTTCTGGATGTGGTTGTTAATGATTATGTGGCTTGAGGGTACTGGGTAGTATATTCATTAACTCAACTAAATAAAAAGAATAAACAAAACAGAGAAAGAAAAAGAACTAATCAACAAAGGAAAAGAATAATTGCCACCCTAATGGATTTAGTTGAATTTAAAATTAACATAAAACTATGTCTCTTATGGGGAAAATCTGATAAATGATTAAAATTAAAAGAAAACCATGTCTCTTATGGAAAATTCCGATAAAGTTGGAAGGATGCAAAAATTAATATAAAACTATTGATCCACTTTGAAATATTATATACATCTTTATGGAGAAAGCCAATCAGCATTAGGTGCTCATGGGATGCATATATGTCAAGTAAAAATGTCTATCTGCTTACCAGATAAGTTTTACTATCTAATTTACAAATTGTGCCAAGTTTGAGGGACTATCTAGGTATTTAGACCAGGTTATTTGTATGATCTACTTTAAAAATGCTTATAAATCAGTAAAGGATACTATATAAATAGACTTTAAGGGGTAAGTGAATCTTATGTTAGAGTTTCAATTAACAAATCTATCAAAAGAGTTAAGTATTTCTCTGACAAATTCAGCCTTTTATATAACAAATTAGTTTCTTATATTTCTTTATATTGTTATGTCTGAAGAAAAAAATTCTCAAACTGCCGAAGGTATAGATAATCCAATGGAAGACAAATCCTCGACTAATAAAAAAAGGAGCTTCTATTTATCTATATTTTCAACAACTTGAGATTTTTTTCCCGGACATAACAATAAGGGGATATTAGAAACTACTTTGTCATATAAAAGATCGAATTTGTTAGAAAAACTGTTAGTTCTTTTGGTCGAGTTGTAATTGAAGCTCTAACATAGAATTCACTTATCTCTTGAAGTCTATTTATATAGTACTTTTACTAGCTTATGAGCATGTTTAAAGTTCACCATATAAATAATCTAGTGTAAATATCTAGATATTTCCTCAAACTTGGCAAAATTTGTAAATAGACACTTAAACTTTGTTTGGTGACTTGATAGACACTCTTACTTGACATATATGTGATAGATTTTATGATCATGGAGTTTAGACTCCATTGTTGCAGATTTCTGCAACTCTAAGGAAATGGCAGTAAGAAAAATCTAGAAGAAGAAGAAGAAGAAGAAAACAAAGAGTTTTTCATATATGCTGAATACAATAATGACTCCTATTTATAGGAATCATGTTATTCTATTTGTTCACACTTTAGGAGTTGAAGTTAGTTACAACTAACTACAAATTGCCTAACTACTTTCATGACTCCTAACTAACTAATACTAACAAACTTAACTACTTATTGGACTATGTAATTCCAATACTCCCCCTCAAGCTGAAATCTCTATAGACATTGAAGACTCCAAGCTTGTTTATCAGTCCAAGATGTTGAGTAACTCCCAGTCCTTTGGTTAGAAGATCTGCTAACTGTTCCTTTGTGTTGATATATTCTGTTTGTATCATTCCATTTTTGATTTTTCCCCTCACAAAATGACAATCAATCTCAATGTGCTTGGTCCTTTCATGAAAAATAGGATTAGCTCCAATTTGAATTGCAGCCTTCATATCACAGTGCAATTTTACAGGAACTATCACATTCACATTAAGTTCTTTTAATACTTCAAGTAACCATGATATTTCCGATACTGCAGCTGCTATGCTCCTATACTCAGCTTCTGCTGACTATATGTTGCTTCTTGGATTTCCAAGAAATGAGTGAATTCCCTAGCTTGATTACATACCCTGTTACTGACTTTCTTGTGTTTGGGCATGATGCCCAGTCTGAGTCACAGAATGCCTCCATTTCATTGCTATCTTCACTGCTAAGTAGTATTCCTTGTCCTGGACATCCTTTAATGTATCTAACCAATCTTAATGCAGCTTCCCAGTGAGACACCTTAGGTTTTTGCATGAACTGTGATAAAACTTGTACTGCAAAACATATATCTGGCCTAGTAGTTGTAAAGTATAACAACCTACCAATTAATCTCTGATGTGCAGTAACATTTGCATATAAAGGATCATCTGTCTTTGCAATGGCTTCATCATATTCAACAGTAGTTAATTTGACACCTGATTCTAGAGGTGTGCTTGCTGGTTTTGAACCTCCAAAGACTACAGTCTGAAATCAACTCCAGTGCATACTTTCTTTGGCTAAGAACAATACCATTTTTTGATCTTAGTACTTCAATACCAAGAAAATACTTTAGATCACCAAGATCTTTCATTTTGAAGTTACTATGTAATGTAGCCTTTAGATCCTGAATCAAAACACTGCTATTTCCAGTTATAAGAAGATCATCTACATAGATCAACACTGCTGCAATATCACCTCCAACTCTCTTTGTGAAAAGAGAATGATCATAAGAACTTTGAGAATAACCAGCAGTAACTAGAGCCTCAGTTAGCTTAAGGTTCCATTGCCTAGAATCTTTCTTCAAGCCATAAAAGACTTCAACAATTTACAGACTTTGTTCTCCCCCTGCCTCTGAAATCCCTAAGGCAAGTCCATGTACACTTCTTCAGTGAGATCACCCTGAAGGAAAGCATTATGGACATCCATTTGAAAAAGAGGCCAACCATGGGATGCTGCAACACTAATCACAGTTCTCACTGTGACCATCTTAGCTACTGGGGAAAAAGTTTCATGATAGTCCAATCCTTCTTGTTGATTATAGCCTTTGGCAACCAACCTAGCCTTGTACCTTTCCACCTTACCATTGGCCTTAAGTTTAACTTTATAAACCCATTTTGAACCAATAGGATGTTTACTAGATGGCAAATCCACTATTGCCCAGGTATTGTTTTGCTCTAAAGCAGCTACTTCAGACTGCATTGCATCCACCCATTGTTGATGTTTGGAGGCTTCCTTGAAGCTGGTGGGTTCCACTATAACTGAGAATCTCTTGATAAAACTTTGATAAGATGGTGTCAAGAGTTCATAGGACAAATTATTAGCAATAGGATATAAACAAGTCATATTGGACTTAGTTGAAACTAAGTAATCTTTATGCCAAAGAGGAGGCTTAGAAGGTTTAGCAGTCCTTCTAGCAGGTGCAAGATCACTTTTACTTATTGAAATTACATAGTCCAATAAGTAGTTAAGTTTGTTAGTATTAGTTAGTTAGGAGTCATGAAAGTAGTTAGGCAACTTGTAGTTAGTTGTAACTAACTTCAACTCCTAAAGTGTGAACAAATAGAATAACATGATTCCTATAAGGAAACATTATTGTATTCAGCATATATGAAAAACTCTCTGTTTCTTCTTCTTCTTCTTCTAGATTTTTCTTACTGCCATTTCCTTAGAGTTGCAGAAATCTGCAACAATGGAGTCTTTAACTCCATGATCATAAAATCTATCATGGTATCAGAGCAGGCGTAACTAGGACTAGTTTGATTTCAAATTTTTCTTTCCGCAAAGTAATTTTTTGAAGCTCAGATTATAGCCATGGCGAACTTACTGTAGCAAAACTTGGACACAATCATCCACTCTATCTGCAGCCTTCAGACATGCCTGGTGTTGCATTGATTACAACAAAGCTCACAGGACTTGAGAATTATGGTCTTTGGAGCAGATCGATGAGATTAGCACTGTTGGTGAAAAATAAGATAAGCTTCATAGATGGAACTTGTTTGAAGAGTATGTACAAGGATGAATTAGCAGTCCAATGGGAAAGATGCAATGCAGTGGTTCTTTCATGGATTAGTAGCACAGTAGCAAACAATATGTTAACAACAATAGTATATGCATCTAATGCAAAACGAGTTTGGGAAGATTTCAAGGAGAGGTTTGATAAATCTAATCTCACTAGGATCTATCAACTCTGGACAGAAGTAGCCACATGAAAGCAAGGTACGGATTCTGTAACAGAGTATTATTCTAAATTGAGGGATTTATGGGATGAGTATGATGTATTGGTGCCCTCACCATCATGTAAATGTGATGATGCTAAGCCTTATATTGAGCATTTACATCAACAAAGATTGATGATGTTCCTGATGGGGTTAAATGAGACTTTCAGTCATGTGAGAAGTGATTTGTTGCTGAAAAGTGAAGTACCTAGCATTAACCAAGCTTATGCAACTGTAATTCAAGAGGAAAGCCAAAGAGTATTAGGTGTAGTGGATTCAAATAAAGAGCCACTTACTATGATGACAGGAAGAGGACAAGGACAAGGATTCAAAGGGAAGAAGGTATTACCAGGCAATTCCAATAATATGAATCTCTTAAGTACCTTATGCTGACATGTCAAATTTGTGTGTATTGCAGTCCACGTTGGCGTGTGAACAAACTATGTCTCTACTGGGAAAAATCCGATAAATAATTAAAATTAACATAAAACTATGTCTCTTGTGGAAAAATTTCGATAAAGTTGGAAGGATGCAAAAATTAACATAAACTATTGATCCACTTTGGAAAATTATATACATCTTTATGGAGAAAGCTAATCAAGCGTGCAACATGCTTTTTTTCTTTTTGATGACCATGATGTTCGGACTAGCTTTTCGTACTTCGTCTAATTCTACAAGATATCTGCCACCTCCCACCAAATACTAGATTATCCATATGGTTAACTAAACATGCTCATAAGCCAGTAAGAGATACAATATAAATAGGCTTTAAGGGATAACTTAATTCTATGTTAGAGTTTCAATTAACAAATCTACAAAAAGAGTAAACTGTTTTTTCTGAAAATTTCACCCTTTCTCAAACTGCTGATGGAATAAATAACCCAATGGAAGCTCCCTTTTAGGGGTATGAGAGAAGAAGTTTGTATGCTATAGGTAGATCAGGACAAATAATTTATTACTGATCAAATGGTTCATTTGCAAGAATTTATGAATATAAAGATGACATTCCTAGAATTTATAATCTCTGTTTCTTTGATATAACTAAATTATGTGTGATTTCATTTTTATTAGAGATTTTCAAGATAGAGATAGTGTTATGATAACAAGGAACAGAGAAATTCAAGATTTATAGGATAAATGAAATTTAAGAAGAGACGATTTTAACTTTGTCAAAAAAAGAAAAGAAAAGAAAAGAAGAGATGATTTTAAAATCACAAGAAAACAAACATGATTTCAATAAAATCGCTAATAAAAAGGAAATCACATAAAATTTAGCTATATCTAAGAATCAAAGATTGTAAGTTCTAGGGATATCATTTTTTGTATCCATAAAATTCTCGCGAATCAACCATCTGATCAATAACACAAATTTCTTCTCTCATGAAAAGGAGCTTCCATTGCGTTATTTGTTTTTCAACAGTTTGAGAATAATTGTTCTTCAGACATAAGAATAAGGAGATATAAGAAACTAATTTATTATATAAAAGAACAAATTGTCAGAGATTTAGTTAACTCTTTTTTGGTAGATTTGTAATTGAAACTCTAGCGTGGAATTCACTTGTCTCTTAAAGCCTGTTGATATAGTATCCTTTACTATCTTATGAGCATGTTTAAAGTTGACTATAAATAATTTAGTCTTAATGCCTAATAGTCCCTCAAAACTTGACACAATTTGTAAATAGATGCTTAAACTTATCTGGCGACTAGATAAACACTTTTACTTGATATATATACATCTCATAAGCACCTAATGTTGGCATTTCAAATTTGTGTGGATTGTACTCCATATTGACTCGTGAACAAATTAAATCAGTCAATTTCTTCTCCACCCCACCCCCCCTGATTTTTTTAATGCATTCTTTTTACATTTTCCTTGGAAATTTTGAACTAAATGATCCTAAAGAATGGTATAAGTGATTGTTTTCTTTATTCTAAACAGAGAACAACTTATAAATTAGGTCATGTTTACGTCAATAAAAATCACAAATTTTACAAATGTTTGAGTTATTACACTATTGAATCGCAATTGAAAATAAATATTTGTTGACTATTCTAAAATTTTGACCAACTTTTATCCTCTTAACAATCAAATTATACGACTGCAGGTTCATTATTTCTTCCTATGAGTATCAAAATGTAAAATTGATGATTGAAATTGATTTAAAGTTATTGAGGATGAGATTAAATTTATTAAGTATTAATTGCACTTCTTAAAACTCATCTAACACTTAATGGTAGTCCTAGTTGACTAAATATTCTTTCACCCGTGCTCATAATATTATTGTTCCAATAGTTCAGATGATGAATGTCATCAGGGGCAGAGCTACCCTTTATCAAGGGTGGTCATCCGGACCCTTTGCCGGGAAATTACAGGAGATATGTAGGTAAAATTTTGGATTTTTTGGTTATATACCGAGTAAGGACACCCTTGATACAACTAAGTTTTGTGGCTCAGCTGTAAAGACAGTTCAGGATGAGCATTGCTACCTTGGTTCAATCCCACATAGAAGCATGTACGACTTTTTTGGGTCTATTTTTCATATTATTTTCCTTCACTTTAGTTTCAGTGAGACCAGCAAGATATATTCTATTTTCCCGCAAGTAATTCTTCAACTCTTTCTGCTTGTAGATTTAGTCACACCCCTTAGGTTCTGGAACAGTCACTTCATTGGCAAGTTTGTGGAGCTCCTCTCTAATCAATAGGCAGTGAATCAAGCTTACTATGCATAAGACTCTTAAATCTGTTTTTTGTTGGAATTGTTGTCAATACAGGGAAGTTTGTGAGGTTGAACTCTGGACTTGGCCAGGTTGCATTTGGCCTTAAACTGTGTTGCTGGGGATCTCCTCCTTCTGGTGTCTGTTTGTTACTCCCTGTCTCCATCACCTGGTTGCAAATCTCCTCAACTCTATTTTGGGAATTAGCTGGCGTAGAACTTTGGCCTTGTTCAGTCTTCTGCTCATTAGTATGAACTTGAGGTCGAGTCAGCCCCTTAAATTGCCATGCTTGCGTCACTGTCTCCCTGCTATAGTTACTAGAACTTCGTTACTGTTAAAACTTAAAACTAAACTGTGATACTTCTGGATGTGGTTGTTAATGAGTATGGGGCTTGAGGGTAGTGTGTACATCTACTGTTTAGTTCAGGATAATGATTTCTTTCATTGAAAGTGAACTGATATTTGTTAACTCAACTAAATAAATAGAAGAAACAAAACAGAAAGAACTAATCAACAAAGGAAAAGAATAATTTCCACCCTAATGGATTAGTTGTATTTAGAATTAACATAAAACTATGTCTCTTCTCTTATGGGGAAATCTGATAAATAATTAAAATTAACATAGAACTATGTCCCTTATGGGAAAATTCCGATAAAGGTGGAAGGCCACAAAAATTAACATAAAACTATTGATCCACTTTGAAAAATAATATACATCTTTATGAAGAAAGCTAATCAGTATTAGGTGCTCATGAGATGCATATATGTCAAGAAAAAGTGTCTATATGGTCACTAGATATGTTTAATGTCTAATTTACAAAGTGTGCCAAGTTTGAGGGACTATCTAGGTATTTAAACTAAATTATTTAGGGATAAAGGGACAAATGCGCCCTAAACTATGACTGGAATCCCAGAGACACTTTAACTAAACTAAGGTCTTATTACCCTCAAGTAATTTTTTTGTAATTTAATACCCCTTTTAGCTTACGTGGCATACTCCATGACTCCATGCAGTTGGTAGTTGAGGCACGTAGAAGATGTTTAGATGTCACGTTAGCCAAAAAGGTGTAAAAAGTTACAAAATAAATTGTTTCTCGGGGGTGGGGGGTGGGGGAGGGATGTAATAGGACTTTAGTTTAGCTAAAACGTGTCTCTAGAATTTCGATCATAGTCTAGGGGTACTTGTGCCTTCCTAATTATTTATGTAGTCAACTTTAAACATGCTCATAAGCCAGTAAAGAATACAATATAAATATACTTTAAGGGGTAAGTGAATTTTGTGTTAGAGTTTCAGTTAACAAATCTAGCAAAAGAGTTGTGTATTTCTCTAACAAATTTAATCATTTTATATATAAAAAAATAGTTTCTTATATCTCCTCATGGTTATGTTTGAAAAAAAGATGCCCCAACTGTTGGAGGAATATATAAATCCAATGAAAGCTCCTTTTTATGGGTATGAGAGAAGTTTGTGTTTTACTGATTTATCATAACTAAAAATTTGTTACTGATCAGATGGTTGCTTTGTGAGAATTCCTAATGCTAGGTTGGGCTCAAAAATTCTCACAAATTAACCATTTGATGAGTATTTAGTTCTGTCATGATCAGTAACGCATAAACTTCTTTTCTCATATCCATAAAAAAGGAGCTTCTATTGAATTATCTATTTCTTCAACATTTGAAATAAGGAGATATAAAAAATTACTTTGTTATATAAAAAGCTGAATTTGTCGAAGGAACACTCTTAACTCTTTTAGTAGATTTGTAATTGAAGCTCTAATCAAGAATTCACTTACCCCTTAAAGCCTATTTATATAATATCCGTTACTGGCTTATGAATATGTTTAGAGTTGACCATATAAATAATTAAGTCTAAATACCTAGATAGTCTTTCAATCTTGGCACAATTTGTCATTTAGACAGTTAAACTTATCAGGTGATCAGATAGACACTTTTACTTTTTAGATGATAAAGTCTTTAATAGCAAGGTTTAAAATATACAAGAACGGTAACTTATCTCTTGATTTTCAAAATTGGACAACTATTTTTAGTATAGTGGACAACTATTGTTGGACGGAGGGAGTATTACTTGTCGTTCTTTAAAAACTCACCTAACACTCAATGGATAGTCTTAGTAGACTAAAGATTCTTTAACACGTGCCCATAATATTAGCGTTCAATAGTTTAGATGATGAATGTCAATATGTCATGTCTTCAAGTAAGGTTAGTGGTCATCTTAGATTTAGGCCTCATTTATTTTGTTGGTATAAATCAGCCCAATGATACTTCTTAACATGGTGCGATATTGTGCCTTGGCCAAGCTGGCCGTTTTTTCTCAGTAGGCCAAATGCCATTGAGAGATCCTACACCTTATCTGTAGCTTCCAAATGTGGAAATTTGTTCTCACACCCAACAATCTTCCCCTCAAACTTACTTCCACATAGTCCATCATCATGAACCACGGGTCATTTCCTAAGATTCATTGCGTCATTCACATCATCTGTTATTTTATGGCAACTGAAGCCCAACATTAGCTTCTTTTTATGTGTGCATCTAGCATTGTATATTTACATAATCTACTGTTGATAGTTCTAGTGTATCCTGGTTCTTTATCTGTGTTTACCAAATCATATCATTGTTGTAGTTTTTTTAAAAGCTGTGAGTGGATTTTGTGCATTGACTTTTCGCAGGAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATCATTCATAAGCTATTTAACACACTCTGAAGCCATTGAGCATATATACAAATGGTAAACTAGAAATTGCTGGGTTTTTTTTATATCAAATTATGGCCCATAATCAATTGTACTTGTTCAAATTCTCAGCCTTTTACTGCTACATAAT</genome_strand>
        <mrna_strand>CAATTATTGGTTTAACTTGTCGAGTTGGTCGTGCAATATCTGGAAGTGCAAACTCATTGCGAGATCTAGTTAAAGATGGTTCTTCTTTGTTGCTCATTGGTCCTCCTGGAGTAGGAAAAACAACTATTATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATAGCCAGGATGCTTGCAAATGATTATGGGAAGCGCGTAATGATTGTAGACACCTCTAATGAAATTGGTGGGGATGGTGATATACCTCATGCAGGAATAGGTAATGCTCGGCGGATGCAAGTTCCACATAATGATATGCAACACAAG...........................................................................................................................................................................................................................................................................................GTGCTGATAGAAGCAGTGGAAA..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCAGAGCGAATTGGAACAGGAACAGATTTAAGGCTTCAGATTCTCCCCTTCACCAGTGCATCTGATGAAGACGGTCATGATAGTGATGGAG-T--TGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTGAATAGATTACCTCTACTACCTGAATAAGAAAGTAGATTGTTTGTTTTAACACCAATTGCCTTTATCAGAGTGCATCATCTTTTGTACCATTTTTAAGCTATTGAACATACTCTGAAGCCATCGAGTGTAAATACAAATGGTAAACTACAAATTG--GTGTTTTTTTAATATCAAATTATGGCCCATAATCAGTTATACTTGTTCAAATGCTCAGCCTCTTACTGCTGCATAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E425036" ref_strand="-" ref_description="SGN-E425036 [STM-44-O24]">
      <seq>ttgagtttactgataatatcagtgaagcagatgtgctacttgctctgcagtccaagcttaagaaaaattctcggattcaagcagctgcaagatctcacggcattcttatttatgtgacaaagacaagctcctcaacacagctgacaaaggctatgcaggcattaatcagtgattttgctgatggctttgagtttcttgaatctgaagctaagacgaatgagtctgaaaagattgatgccttagaggaggctcgaatagccatggagcgagtggtaattccaaaaggggaacctgttgagctactccctaggccaacaaatattatactgcttcagaaggatcttgttagaaagtacaagctaaaatcagagcgaattggaacaggaacagatttaaggcttcagattctccccttcaccagtgcatctgatgaagacggtcatgatagtgatggagttgatgagagtgaagttgatgaattattattcaggccgaatgctgaatcaaatggatctgcctacactgtgaatagattacctctactacctgaataagaaagtagattgtttgttttaacaccaattgcctttatcagagtgcatcatcttttgtaccatttttaagctattgaacatactctgaagccatcgagtgtaaatacaaatggtaaactacaaattggtgtttttttaaaaacaaattatggcccataatcagttagttgatcaaaaaaaagggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="53606" stop="41644"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53306" g_stop="53185" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53184" i_stop="53027" i_length="158">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.977" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53026" g_stop="52904" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="245" r_length="123" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52903" i_stop="42425" i_length="10479">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42424" g_stop="41946" g_length="479"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="719" r_length="474" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E425036" ref_strand="-">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="0.972" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E425036" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="53306" e_stop="53185"/>
          <exon e_start="53026" e_stop="52904"/>
          <exon e_start="42424" e_stop="41946"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAGGTATTTGTTAGAACCAACTTGCAATATCTCCTTATTTGAATGAAAGTTCTGAAGAAAGAAGGAAAAACAAGATGAGTTCTTTTATGCATTATCTGTTGCCTGTGCTGAGTCCGAATTCACTATCCTTGTGTGTATTGAAGTATCTTTTCCTTTTGCAGACTAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGCTTTGAGTTTCTCGAATCTGAAGCTAAAACTAATGAGTCTGAAAAGATTGATGCCTTAGAGGTAATTTCCCGTTGTATTCTTTTTTAGTACTTTTTTTGGAAAATTCAATTTCAAAGACTCTAGCGGCTGACTTCCATAAAGATGATGATGGGCTTTTTGTGATTAACTGGCTTTTAACTACCCTAAAGTTGAGGGTGATTATCCTTAAGTTGGCTTTTAACTTTATGATGAAATACTAATTTTCACTCTCTGGAAAACATGGAGGTTCCAATGAAGTCATTGGCCTGAAATATATGTGCTATACCATTTAGTCATGCTGTGTGAGGACATCTGACGTTTGCAATGGAACAAAAGATAAAGTAGACTTCAACTTAGGATTCACCAAGTCTGTGGTTGAAAAAATTGTGGTCTCATGTCAGTCTAAGAAGGGGATTGGTAAAAGTCGCCGCCATGTGACCACGAGGTCACAATTTCAAACCGTTGAAAGCTCTTGCAGAAATGCAAGGTAAGGCAGCCTATATGAGAGCCAATGGGGTCTGGGCCTTCCCCAGTCTGTGCATAGGGGGAGCTTAGTGGACCTGTCTGTCCTTTTTCTTTTTCATTTTGGACTAGGGCATCAGCTATTTACAATGGAAAAGAGATAAAAATTCATTTCAGACTAAGTGGTGTTTGAATTGGCTTATTTTTAGTGGTTTCTGGCATTTAAGCATTTCTTTAGTTTTGGAAGTGTTTGGGTAGAAGTGTTTTTAAACACTTATTCAAAGCTGAGAAAGTACAAAAAAGAAGCCAAAAGCCAATAGTTGGGGGTTCCCAACTAATGACTTTTGGCTTTTAGTAACTTATAAGCCACTTAAAAAAAGTCAATCCAAACACACCGTAATATTCAAATATGTGTGAAGTGGCTTGTTGTCTAAGGTCTCATCCGAAGGTGGAGTATTCAACAAATATATTATCCTGCTAGCTAGAATCTATAGGAGAATACTGAAGGAGTGTGAACATTTAGATTAAGGTCATCAGGCGCTCTATTGTATTCTGTTAATATCCTGAGGAATTCTCCTTTGGAAATTAGAGAAGCTTAATTAGCCAATAGGTTGGGAAAAAGAACACATCAACCAGCTAATATTCATCCAAAAAAATCAACTGATGCACAAGCCTTTTCTTTTTTCTTATCAGGATATAGAGCGTCACATTTGTACTCGAGTTACTAGAACTTCACTACTGTTAAAACTTAAAACTGAACTGGGATACTTCTGGATGTGGTTGTTAATGATTATGTGGCTTGAGGGTACTGGGTAGTATATTCATTAACTCAACTAAATAAAAAGAATAAACAAAACAGAGAAAGAAAAAGAACTAATCAACAAAGGAAAAGAATAATTGCCACCCTAATGGATTTAGTTGAATTTAAAATTAACATAAAACTATGTCTCTTATGGGGAAAATCTGATAAATGATTAAAATTAAAAGAAAACCATGTCTCTTATGGAAAATTCCGATAAAGTTGGAAGGATGCAAAAATTAATATAAAACTATTGATCCACTTTGAAATATTATATACATCTTTATGGAGAAAGCCAATCAGCATTAGGTGCTCATGGGATGCATATATGTCAAGTAAAAATGTCTATCTGCTTACCAGATAAGTTTTACTATCTAATTTACAAATTGTGCCAAGTTTGAGGGACTATCTAGGTATTTAGACCAGGTTATTTGTATGATCTACTTTAAAAATGCTTATAAATCAGTAAAGGATACTATATAAATAGACTTTAAGGGGTAAGTGAATCTTATGTTAGAGTTTCAATTAACAAATCTATCAAAAGAGTTAAGTATTTCTCTGACAAATTCAGCCTTTTATATAACAAATTAGTTTCTTATATTTCTTTATATTGTTATGTCTGAAGAAAAAAATTCTCAAACTGCCGAAGGTATAGATAATCCAATGGAAGACAAATCCTCGACTAATAAAAAAAGGAGCTTCTATTTATCTATATTTTCAACAACTTGAGATTTTTTTCCCGGACATAACAATAAGGGGATATTAGAAACTACTTTGTCATATAAAAGATCGAATTTGTTAGAAAAACTGTTAGTTCTTTTGGTCGAGTTGTAATTGAAGCTCTAACATAGAATTCACTTATCTCTTGAAGTCTATTTATATAGTACTTTTACTAGCTTATGAGCATGTTTAAAGTTCACCATATAAATAATCTAGTGTAAATATCTAGATATTTCCTCAAACTTGGCAAAATTTGTAAATAGACACTTAAACTTTGTTTGGTGACTTGATAGACACTCTTACTTGACATATATGTGATAGATTTTATGATCATGGAGTTTAGACTCCATTGTTGCAGATTTCTGCAACTCTAAGGAAATGGCAGTAAGAAAAATCTAGAAGAAGAAGAAGAAGAAGAAAACAAAGAGTTTTTCATATATGCTGAATACAATAATGACTCCTATTTATAGGAATCATGTTATTCTATTTGTTCACACTTTAGGAGTTGAAGTTAGTTACAACTAACTACAAATTGCCTAACTACTTTCATGACTCCTAACTAACTAATACTAACAAACTTAACTACTTATTGGACTATGTAATTCCAATACTCCCCCTCAAGCTGAAATCTCTATAGACATTGAAGACTCCAAGCTTGTTTATCAGTCCAAGATGTTGAGTAACTCCCAGTCCTTTGGTTAGAAGATCTGCTAACTGTTCCTTTGTGTTGATATATTCTGTTTGTATCATTCCATTTTTGATTTTTCCCCTCACAAAATGACAATCAATCTCAATGTGCTTGGTCCTTTCATGAAAAATAGGATTAGCTCCAATTTGAATTGCAGCCTTCATATCACAGTGCAATTTTACAGGAACTATCACATTCACATTAAGTTCTTTTAATACTTCAAGTAACCATGATATTTCCGATACTGCAGCTGCTATGCTCCTATACTCAGCTTCTGCTGACTATATGTTGCTTCTTGGATTTCCAAGAAATGAGTGAATTCCCTAGCTTGATTACATACCCTGTTACTGACTTTCTTGTGTTTGGGCATGATGCCCAGTCTGAGTCACAGAATGCCTCCATTTCATTGCTATCTTCACTGCTAAGTAGTATTCCTTGTCCTGGACATCCTTTAATGTATCTAACCAATCTTAATGCAGCTTCCCAGTGAGACACCTTAGGTTTTTGCATGAACTGTGATAAAACTTGTACTGCAAAACATATATCTGGCCTAGTAGTTGTAAAGTATAACAACCTACCAATTAATCTCTGATGTGCAGTAACATTTGCATATAAAGGATCATCTGTCTTTGCAATGGCTTCATCATATTCAACAGTAGTTAATTTGACACCTGATTCTAGAGGTGTGCTTGCTGGTTTTGAACCTCCAAAGACTACAGTCTGAAATCAACTCCAGTGCATACTTTCTTTGGCTAAGAACAATACCATTTTTTGATCTTAGTACTTCAATACCAAGAAAATACTTTAGATCACCAAGATCTTTCATTTTGAAGTTACTATGTAATGTAGCCTTTAGATCCTGAATCAAAACACTGCTATTTCCAGTTATAAGAAGATCATCTACATAGATCAACACTGCTGCAATATCACCTCCAACTCTCTTTGTGAAAAGAGAATGATCATAAGAACTTTGAGAATAACCAGCAGTAACTAGAGCCTCAGTTAGCTTAAGGTTCCATTGCCTAGAATCTTTCTTCAAGCCATAAAAGACTTCAACAATTTACAGACTTTGTTCTCCCCCTGCCTCTGAAATCCCTAAGGCAAGTCCATGTACACTTCTTCAGTGAGATCACCCTGAAGGAAAGCATTATGGACATCCATTTGAAAAAGAGGCCAACCATGGGATGCTGCAACACTAATCACAGTTCTCACTGTGACCATCTTAGCTACTGGGGAAAAAGTTTCATGATAGTCCAATCCTTCTTGTTGATTATAGCCTTTGGCAACCAACCTAGCCTTGTACCTTTCCACCTTACCATTGGCCTTAAGTTTAACTTTATAAACCCATTTTGAACCAATAGGATGTTTACTAGATGGCAAATCCACTATTGCCCAGGTATTGTTTTGCTCTAAAGCAGCTACTTCAGACTGCATTGCATCCACCCATTGTTGATGTTTGGAGGCTTCCTTGAAGCTGGTGGGTTCCACTATAACTGAGAATCTCTTGATAAAACTTTGATAAGATGGTGTCAAGAGTTCATAGGACAAATTATTAGCAATAGGATATAAACAAGTCATATTGGACTTAGTTGAAACTAAGTAATCTTTATGCCAAAGAGGAGGCTTAGAAGGTTTAGCAGTCCTTCTAGCAGGTGCAAGATCACTTTTACTTATTGAAATTACATAGTCCAATAAGTAGTTAAGTTTGTTAGTATTAGTTAGTTAGGAGTCATGAAAGTAGTTAGGCAACTTGTAGTTAGTTGTAACTAACTTCAACTCCTAAAGTGTGAACAAATAGAATAACATGATTCCTATAAGGAAACATTATTGTATTCAGCATATATGAAAAACTCTCTGTTTCTTCTTCTTCTTCTTCTAGATTTTTCTTACTGCCATTTCCTTAGAGTTGCAGAAATCTGCAACAATGGAGTCTTTAACTCCATGATCATAAAATCTATCATGGTATCAGAGCAGGCGTAACTAGGACTAGTTTGATTTCAAATTTTTCTTTCCGCAAAGTAATTTTTTGAAGCTCAGATTATAGCCATGGCGAACTTACTGTAGCAAAACTTGGACACAATCATCCACTCTATCTGCAGCCTTCAGACATGCCTGGTGTTGCATTGATTACAACAAAGCTCACAGGACTTGAGAATTATGGTCTTTGGAGCAGATCGATGAGATTAGCACTGTTGGTGAAAAATAAGATAAGCTTCATAGATGGAACTTGTTTGAAGAGTATGTACAAGGATGAATTAGCAGTCCAATGGGAAAGATGCAATGCAGTGGTTCTTTCATGGATTAGTAGCACAGTAGCAAACAATATGTTAACAACAATAGTATATGCATCTAATGCAAAACGAGTTTGGGAAGATTTCAAGGAGAGGTTTGATAAATCTAATCTCACTAGGATCTATCAACTCTGGACAGAAGTAGCCACATGAAAGCAAGGTACGGATTCTGTAACAGAGTATTATTCTAAATTGAGGGATTTATGGGATGAGTATGATGTATTGGTGCCCTCACCATCATGTAAATGTGATGATGCTAAGCCTTATATTGAGCATTTACATCAACAAAGATTGATGATGTTCCTGATGGGGTTAAATGAGACTTTCAGTCATGTGAGAAGTGATTTGTTGCTGAAAAGTGAAGTACCTAGCATTAACCAAGCTTATGCAACTGTAATTCAAGAGGAAAGCCAAAGAGTATTAGGTGTAGTGGATTCAAATAAAGAGCCACTTACTATGATGACAGGAAGAGGACAAGGACAAGGATTCAAAGGGAAGAAGGTATTACCAGGCAATTCCAATAATATGAATCTCTTAAGTACCTTATGCTGACATGTCAAATTTGTGTGTATTGCAGTCCACGTTGGCGTGTGAACAAACTATGTCTCTACTGGGAAAAATCCGATAAATAATTAAAATTAACATAAAACTATGTCTCTTGTGGAAAAATTTCGATAAAGTTGGAAGGATGCAAAAATTAACATAAACTATTGATCCACTTTGGAAAATTATATACATCTTTATGGAGAAAGCTAATCAAGCGTGCAACATGCTTTTTTTCTTTTTGATGACCATGATGTTCGGACTAGCTTTTCGTACTTCGTCTAATTCTACAAGATATCTGCCACCTCCCACCAAATACTAGATTATCCATATGGTTAACTAAACATGCTCATAAGCCAGTAAGAGATACAATATAAATAGGCTTTAAGGGATAACTTAATTCTATGTTAGAGTTTCAATTAACAAATCTACAAAAAGAGTAAACTGTTTTTTCTGAAAATTTCACCCTTTCTCAAACTGCTGATGGAATAAATAACCCAATGGAAGCTCCCTTTTAGGGGTATGAGAGAAGAAGTTTGTATGCTATAGGTAGATCAGGACAAATAATTTATTACTGATCAAATGGTTCATTTGCAAGAATTTATGAATATAAAGATGACATTCCTAGAATTTATAATCTCTGTTTCTTTGATATAACTAAATTATGTGTGATTTCATTTTTATTAGAGATTTTCAAGATAGAGATAGTGTTATGATAACAAGGAACAGAGAAATTCAAGATTTATAGGATAAATGAAATTTAAGAAGAGACGATTTTAACTTTGTCAAAAAAAGAAAAGAAAAGAAAAGAAGAGATGATTTTAAAATCACAAGAAAACAAACATGATTTCAATAAAATCGCTAATAAAAAGGAAATCACATAAAATTTAGCTATATCTAAGAATCAAAGATTGTAAGTTCTAGGGATATCATTTTTTGTATCCATAAAATTCTCGCGAATCAACCATCTGATCAATAACACAAATTTCTTCTCTCATGAAAAGGAGCTTCCATTGCGTTATTTGTTTTTCAACAGTTTGAGAATAATTGTTCTTCAGACATAAGAATAAGGAGATATAAGAAACTAATTTATTATATAAAAGAACAAATTGTCAGAGATTTAGTTAACTCTTTTTTGGTAGATTTGTAATTGAAACTCTAGCGTGGAATTCACTTGTCTCTTAAAGCCTGTTGATATAGTATCCTTTACTATCTTATGAGCATGTTTAAAGTTGACTATAAATAATTTAGTCTTAATGCCTAATAGTCCCTCAAAACTTGACACAATTTGTAAATAGATGCTTAAACTTATCTGGCGACTAGATAAACACTTTTACTTGATATATATACATCTCATAAGCACCTAATGTTGGCATTTCAAATTTGTGTGGATTGTACTCCATATTGACTCGTGAACAAATTAAATCAGTCAATTTCTTCTCCACCCCACCCCCCCTGATTTTTTTAATGCATTCTTTTTACATTTTCCTTGGAAATTTTGAACTAAATGATCCTAAAGAATGGTATAAGTGATTGTTTTCTTTATTCTAAACAGAGAACAACTTATAAATTAGGTCATGTTTACGTCAATAAAAATCACAAATTTTACAAATGTTTGAGTTATTACACTATTGAATCGCAATTGAAAATAAATATTTGTTGACTATTCTAAAATTTTGACCAACTTTTATCCTCTTAACAATCAAATTATACGACTGCAGGTTCATTATTTCTTCCTATGAGTATCAAAATGTAAAATTGATGATTGAAATTGATTTAAAGTTATTGAGGATGAGATTAAATTTATTAAGTATTAATTGCACTTCTTAAAACTCATCTAACACTTAATGGTAGTCCTAGTTGACTAAATATTCTTTCACCCGTGCTCATAATATTATTGTTCCAATAGTTCAGATGATGAATGTCATCAGGGGCAGAGCTACCCTTTATCAAGGGTGGTCATCCGGACCCTTTGCCGGGAAATTACAGGAGATATGTAGGTAAAATTTTGGATTTTTTGGTTATATACCGAGTAAGGACACCCTTGATACAACTAAGTTTTGTGGCTCAGCTGTAAAGACAGTTCAGGATGAGCATTGCTACCTTGGTTCAATCCCACATAGAAGCATGTACGACTTTTTTGGGTCTATTTTTCATATTATTTTCCTTCACTTTAGTTTCAGTGAGACCAGCAAGATATATTCTATTTTCCCGCAAGTAATTCTTCAACTCTTTCTGCTTGTAGATTTAGTCACACCCCTTAGGTTCTGGAACAGTCACTTCATTGGCAAGTTTGTGGAGCTCCTCTCTAATCAATAGGCAGTGAATCAAGCTTACTATGCATAAGACTCTTAAATCTGTTTTTTGTTGGAATTGTTGTCAATACAGGGAAGTTTGTGAGGTTGAACTCTGGACTTGGCCAGGTTGCATTTGGCCTTAAACTGTGTTGCTGGGGATCTCCTCCTTCTGGTGTCTGTTTGTTACTCCCTGTCTCCATCACCTGGTTGCAAATCTCCTCAACTCTATTTTGGGAATTAGCTGGCGTAGAACTTTGGCCTTGTTCAGTCTTCTGCTCATTAGTATGAACTTGAGGTCGAGTCAGCCCCTTAAATTGCCATGCTTGCGTCACTGTCTCCCTGCTATAGTTACTAGAACTTCGTTACTGTTAAAACTTAAAACTAAACTGTGATACTTCTGGATGTGGTTGTTAATGAGTATGGGGCTTGAGGGTAGTGTGTACATCTACTGTTTAGTTCAGGATAATGATTTCTTTCATTGAAAGTGAACTGATATTTGTTAACTCAACTAAATAAATAGAAGAAACAAAACAGAAAGAACTAATCAACAAAGGAAAAGAATAATTTCCACCCTAATGGATTAGTTGTATTTAGAATTAACATAAAACTATGTCTCTTCTCTTATGGGGAAATCTGATAAATAATTAAAATTAACATAGAACTATGTCCCTTATGGGAAAATTCCGATAAAGGTGGAAGGCCACAAAAATTAACATAAAACTATTGATCCACTTTGAAAAATAATATACATCTTTATGAAGAAAGCTAATCAGTATTAGGTGCTCATGAGATGCATATATGTCAAGAAAAAGTGTCTATATGGTCACTAGATATGTTTAATGTCTAATTTACAAAGTGTGCCAAGTTTGAGGGACTATCTAGGTATTTAAACTAAATTATTTAGGGATAAAGGGACAAATGCGCCCTAAACTATGACTGGAATCCCAGAGACACTTTAACTAAACTAAGGTCTTATTACCCTCAAGTAATTTTTTTGTAATTTAATACCCCTTTTAGCTTACGTGGCATACTCCATGACTCCATGCAGTTGGTAGTTGAGGCACGTAGAAGATGTTTAGATGTCACGTTAGCCAAAAAGGTGTAAAAAGTTACAAAATAAATTGTTTCTCGGGGGTGGGGGGTGGGGGAGGGATGTAATAGGACTTTAGTTTAGCTAAAACGTGTCTCTAGAATTTCGATCATAGTCTAGGGGTACTTGTGCCTTCCTAATTATTTATGTAGTCAACTTTAAACATGCTCATAAGCCAGTAAAGAATACAATATAAATATACTTTAAGGGGTAAGTGAATTTTGTGTTAGAGTTTCAGTTAACAAATCTAGCAAAAGAGTTGTGTATTTCTCTAACAAATTTAATCATTTTATATATAAAAAAATAGTTTCTTATATCTCCTCATGGTTATGTTTGAAAAAAAGATGCCCCAACTGTTGGAGGAATATATAAATCCAATGAAAGCTCCTTTTTATGGGTATGAGAGAAGTTTGTGTTTTACTGATTTATCATAACTAAAAATTTGTTACTGATCAGATGGTTGCTTTGTGAGAATTCCTAATGCTAGGTTGGGCTCAAAAATTCTCACAAATTAACCATTTGATGAGTATTTAGTTCTGTCATGATCAGTAACGCATAAACTTCTTTTCTCATATCCATAAAAAAGGAGCTTCTATTGAATTATCTATTTCTTCAACATTTGAAATAAGGAGATATAAAAAATTACTTTGTTATATAAAAAGCTGAATTTGTCGAAGGAACACTCTTAACTCTTTTAGTAGATTTGTAATTGAAGCTCTAATCAAGAATTCACTTACCCCTTAAAGCCTATTTATATAATATCCGTTACTGGCTTATGAATATGTTTAGAGTTGACCATATAAATAATTAAGTCTAAATACCTAGATAGTCTTTCAATCTTGGCACAATTTGTCATTTAGACAGTTAAACTTATCAGGTGATCAGATAGACACTTTTACTTTTTAGATGATAAAGTCTTTAATAGCAAGGTTTAAAATATACAAGAACGGTAACTTATCTCTTGATTTTCAAAATTGGACAACTATTTTTAGTATAGTGGACAACTATTGTTGGACGGAGGGAGTATTACTTGTCGTTCTTTAAAAACTCACCTAACACTCAATGGATAGTCTTAGTAGACTAAAGATTCTTTAACACGTGCCCATAATATTAGCGTTCAATAGTTTAGATGATGAATGTCAATATGTCATGTCTTCAAGTAAGGTTAGTGGTCATCTTAGATTTAGGCCTCATTTATTTTGTTGGTATAAATCAGCCCAATGATACTTCTTAACATGGTGCGATATTGTGCCTTGGCCAAGCTGGCCGTTTTTTCTCAGTAGGCCAAATGCCATTGAGAGATCCTACACCTTATCTGTAGCTTCCAAATGTGGAAATTTGTTCTCACACCCAACAATCTTCCCCTCAAACTTACTTCCACATAGTCCATCATCATGAACCACGGGTCATTTCCTAAGATTCATTGCGTCATTCACATCATCTGTTATTTTATGGCAACTGAAGCCCAACATTAGCTTCTTTTTATGTGTGCATCTAGCATTGTATATTTACATAATCTACTGTTGATAGTTCTAGTGTATCCTGGTTCTTTATCTGTGTTTACCAAATCATATCATTGTTGTAGTTTTTTTAAAAGCTGTGAGTGGATTTTGTGCATTGACTTTTCGCAGGAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATCATTCATAAGCTATTTAACACACTCTGAAGCCATTGAGCATATATACAAATGGTAAACTAGAAATTGCTGGGTTTTTTTTATATCAAATTATGGCCCATAATCAATT</genome_strand>
        <mrna_strand>TTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCTTATTTATGTGACAAAG..............................................................................................................................................................ACAAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGCTTTGAGTTTCTTGAATCTGAAGCTAAGACGAATGAGTCTGAAAAGATTGATGCCTTAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCAAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCAACAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAACAGATTTAAGGCTTCAGATTCTCCCCTTCACCAGTGCATCTGATGAAGACGGTCATGATAGTGATGGAG-T--TGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTGAATAGATTACCTCTACTACCTGAATAAGAAAGTAGATTGTTTGTTTTAACACCAATTGCCTTTATCAGAGTGCATCATCTTTTGTACCATTTTTAAGCTATTGAACATACTCTGAAGCCATCGAGTGTAAATACAAATGGTAAACTACAAATTG--GTGTTTTTTTAAAAACAAATTATGGCCCATAATCAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E428384" ref_strand="-" ref_description="SGN-E428384 [STM-50-A6]">
      <seq>tgtagaactttggccttgttagtcttctgctcattaatctgaacttgaggaggctcgaatagccatggagcgagtggtaattccaaaaggggaacctgttgagctactccctaggccaacaaatattatactgcttcagaaggatcttgttagaaagtacaagctaaaatcagagcgaattggaacaggaacagatttaaggcttcagattctccccttcaccagtgcatctgatgaagacggtcatgatagtgatggagttgatgagagtgaagttgatgaattattattcaggccgaatgctgaatcaaatggatctgcctacactgtgaatagattacctctactacctgaataagaaagtagattgtttgttttaacaccaattgcctttatcagagtgcatcatcttttgtaccatttttaagctattgaacatactctgaagccatcgagtgtaaatacaaatggtaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45199" stop="41696"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44900" g_stop="44851" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44850" i_stop="42425" i_length="2426">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42424" g_stop="41996" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="475" r_length="426" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E428384" ref_strand="-">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E428384" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="44900" e_stop="44851"/>
          <exon e_start="42424" e_stop="41996"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTAGAACTTTGGCCTTGTTCAGTCTTCTGCTCATTAGTATGAACTTGAGGTCGAGTCAGCCCCTTAAATTGCCATGCTTGCGTCACTGTCTCCCTGCTATAGTTACTAGAACTTCGTTACTGTTAAAACTTAAAACTAAACTGTGATACTTCTGGATGTGGTTGTTAATGAGTATGGGGCTTGAGGGTAGTGTGTACATCTACTGTTTAGTTCAGGATAATGATTTCTTTCATTGAAAGTGAACTGATATTTGTTAACTCAACTAAATAAATAGAAGAAACAAAACAGAAAGAACTAATCAACAAAGGAAAAGAATAATTTCCACCCTAATGGATTAGTTGTATTTAGAATTAACATAAAACTATGTCTCTTCTCTTATGGGGAAATCTGATAAATAATTAAAATTAACATAGAACTATGTCCCTTATGGGAAAATTCCGATAAAGGTGGAAGGCCACAAAAATTAACATAAAACTATTGATCCACTTTGAAAAATAATATACATCTTTATGAAGAAAGCTAATCAGTATTAGGTGCTCATGAGATGCATATATGTCAAGAAAAAGTGTCTATATGGTCACTAGATATGTTTAATGTCTAATTTACAAAGTGTGCCAAGTTTGAGGGACTATCTAGGTATTTAAACTAAATTATTTAGGGATAAAGGGACAAATGCGCCCTAAACTATGACTGGAATCCCAGAGACACTTTAACTAAACTAAGGTCTTATTACCCTCAAGTAATTTTTTTGTAATTTAATACCCCTTTTAGCTTACGTGGCATACTCCATGACTCCATGCAGTTGGTAGTTGAGGCACGTAGAAGATGTTTAGATGTCACGTTAGCCAAAAAGGTGTAAAAAGTTACAAAATAAATTGTTTCTCGGGGGTGGGGGGTGGGGGAGGGATGTAATAGGACTTTAGTTTAGCTAAAACGTGTCTCTAGAATTTCGATCATAGTCTAGGGGTACTTGTGCCTTCCTAATTATTTATGTAGTCAACTTTAAACATGCTCATAAGCCAGTAAAGAATACAATATAAATATACTTTAAGGGGTAAGTGAATTTTGTGTTAGAGTTTCAGTTAACAAATCTAGCAAAAGAGTTGTGTATTTCTCTAACAAATTTAATCATTTTATATATAAAAAAATAGTTTCTTATATCTCCTCATGGTTATGTTTGAAAAAAAGATGCCCCAACTGTTGGAGGAATATATAAATCCAATGAAAGCTCCTTTTTATGGGTATGAGAGAAGTTTGTGTTTTACTGATTTATCATAACTAAAAATTTGTTACTGATCAGATGGTTGCTTTGTGAGAATTCCTAATGCTAGGTTGGGCTCAAAAATTCTCACAAATTAACCATTTGATGAGTATTTAGTTCTGTCATGATCAGTAACGCATAAACTTCTTTTCTCATATCCATAAAAAAGGAGCTTCTATTGAATTATCTATTTCTTCAACATTTGAAATAAGGAGATATAAAAAATTACTTTGTTATATAAAAAGCTGAATTTGTCGAAGGAACACTCTTAACTCTTTTAGTAGATTTGTAATTGAAGCTCTAATCAAGAATTCACTTACCCCTTAAAGCCTATTTATATAATATCCGTTACTGGCTTATGAATATGTTTAGAGTTGACCATATAAATAATTAAGTCTAAATACCTAGATAGTCTTTCAATCTTGGCACAATTTGTCATTTAGACAGTTAAACTTATCAGGTGATCAGATAGACACTTTTACTTTTTAGATGATAAAGTCTTTAATAGCAAGGTTTAAAATATACAAGAACGGTAACTTATCTCTTGATTTTCAAAATTGGACAACTATTTTTAGTATAGTGGACAACTATTGTTGGACGGAGGGAGTATTACTTGTCGTTCTTTAAAAACTCACCTAACACTCAATGGATAGTCTTAGTAGACTAAAGATTCTTTAACACGTGCCCATAATATTAGCGTTCAATAGTTTAGATGATGAATGTCAATATGTCATGTCTTCAAGTAAGGTTAGTGGTCATCTTAGATTTAGGCCTCATTTATTTTGTTGGTATAAATCAGCCCAATGATACTTCTTAACATGGTGCGATATTGTGCCTTGGCCAAGCTGGCCGTTTTTTCTCAGTAGGCCAAATGCCATTGAGAGATCCTACACCTTATCTGTAGCTTCCAAATGTGGAAATTTGTTCTCACACCCAACAATCTTCCCCTCAAACTTACTTCCACATAGTCCATCATCATGAACCACGGGTCATTTCCTAAGATTCATTGCGTCATTCACATCATCTGTTATTTTATGGCAACTGAAGCCCAACATTAGCTTCTTTTTATGTGTGCATCTAGCATTGTATATTTACATAATCTACTGTTGATAGTTCTAGTGTATCCTGGTTCTTTATCTGTGTTTACCAAATCATATCATTGTTGTAGTTTTTTTAAAAGCTGTGAGTGGATTTTGTGCATTGACTTTTCGCAGGAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATCATTCATAAGCTATTTAACACACTCTGAAGCCATTGAGCATATATACAAATGGTAAA</genome_strand>
        <mrna_strand>TGTAGAACTTTGGCCTTGTT-AGTCTTCTGCTCATTAATCTGAACTTGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCAAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCAACAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAACAGATTTAAGGCTTCAGATTCTCCCCTTCACCAGTGCATCTGATGAAGACGGTCATGATAGTGATGGAG-T--TGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTGAATAGATTACCTCTACTACCTGAATAAGAAAGTAGATTGTTTGTTTTAACACCAATTGCCTTTATCAGAGTGCATCATCTTTTGTACCATTTTTAAGCTATTGAACATACTCTGAAGCCATCGAGTGTAAATACAAATGGTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E715300" ref_strand="+" ref_description="SGN-E715300 [FB13DE12]">
      <seq>cgattaaataaatgaagttttgattgaagatataatccagattaatggaggtatacctgattcaactgagctcatctcagcaacaggtccgagcatggaaggaggttctggtgaaagtgaggatgccctttgcatttttctatatgggatctcagaggcaagtgtgatgcaagggataaaacagcttaacattgacgatacgtttgagtttactgataatatcagtgaagcagatgtgctacttgctctgcagtccaagcttaagaaaaattctcggattcaagcagctgcaagatctcacggcattcctatttatgtgacaaagactagctcctcaacacagctgacaaaggctatgcaggcattaatcagtgattttgctgatggctttgagtttctcgaatctgaagctaaaactaatgagtctgaaaagattgatgccttagaggaggctcgaatagccatggagcgagtggtaattccgaaaggggaacctgttgagctactccctaggccatcaaatattatactgcttcagaaggatcttgttagaaagtacaagctaaaatcagagcgaattggaacaggaatggatttacggcttcggattctccctttcaccagtgcatccgatgaagacggtcacgatagtgaaggagttgatgatgagagtgaagttgatgaattattattcaggccgaatgctgaatcaaatggatctgcctacactgtaaatagattacctctactacctgaataagaaagtaaattgttggttttaacaccaattgcctctatcagagtgcatcatcttttgcatcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54660" stop="41751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54361" g_stop="54214" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54213" i_stop="53362" i_length="852">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.294" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53361" g_stop="53185" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="325" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53184" i_stop="53027" i_length="158">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53026" g_stop="52904" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="326" r_stop="448" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52903" i_stop="42425" i_length="10479">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="42424" g_stop="42052" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="449" r_stop="821" r_length="373" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="822" polyA_stop="836"/>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E715300" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>821</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54361" e_stop="54214"/>
          <exon e_start="53361" e_stop="53185"/>
          <exon e_start="53026" e_stop="52904"/>
          <exon e_start="42424" e_stop="42052"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTGAGCTCATCTCAGCAACAGGTCCGAGCATGGAAGGAGGTTCTGGTGAAAGTGAGGATGCCCTTTGCATTTTTCTATATGGGGTAAGATGATATTACCATTTACTTGTTCGATAGGAAAAAAGAATGTCATCACTACATTGAATATGTATAAGTTTGGTTAATAACTAAAATCCCAGTCTCAGAATCTGTTCTCTTAGTTCAACTTTAATACCGAGCTAGTATTCGTATTGTTGAAGGGCCTTCGAAAGAGAATCAATTTCCAAAAAGTGAAATACCTCCTAGTACATGATGGTTCTGCATTCGTATACTATTGTTACTTAATTTGCTGCAAAGTTAGTCTCTTTCAATTTGTGGATCTAATAAACCTGATTTGATGCTTCTCCAGTATCCTAATAGTCTCCTTGTTTTCCTATCTTTTCATGTTAAGGTCCCACATACCCCCTTCCTCTGCTGGAAGTGCTTGGTGGCCCCAAACATGAAGTGTAGAAGTATCGAGCAGGAATGATTTTTTTCTTTTGGCTGACTATTCAAATTCAAGCCCCAGCAATTTTTTTTTTTTAAAAAATATTCCTGGAAGAAAAGATCACATGCTTGAATTTTGTCACTCCTTGTATAGGCGGAAAAAGAGTAGATGTTCTTCTATGCTTTAGCTCATTAAGATTTCACCCATTAAAATACTTGTCAAAGACACATTTTAGAATTACAGAGCCTCCTCTTCAAACTTTATATCATCTAATGAAGCATTTGAGTTAATCCACTCTCTTTTCCTTTTAGTTCTCTAAATTTTTTAACTTCTATGAGGGAAAGTGTAGCATAGAATAAGAGATTCTTATGAAGAAAACGTAATAGAAGAGAGGAAAAAACACGATAAAGCTCCATCAGCTTCTATATGGAAACATCTACGTGGAACTCATATTTGAGCAGGTATTGTAGATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAGGTATTTGTTAGAACCAACTTGCAATATCTCCTTATTTGAATGAAAGTTCTGAAGAAAGAAGGAAAAACAAGATGAGTTCTTTTATGCATTATCTGTTGCCTGTGCTGAGTCCGAATTCACTATCCTTGTGTGTATTGAAGTATCTTTTCCTTTTGCAGACTAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGCTTTGAGTTTCTCGAATCTGAAGCTAAAACTAATGAGTCTGAAAAGATTGATGCCTTAGAGGTAATTTCCCGTTGTATTCTTTTTTAGTACTTTTTTTGGAAAATTCAATTTCAAAGACTCTAGCGGCTGACTTCCATAAAGATGATGATGGGCTTTTTGTGATTAACTGGCTTTTAACTACCCTAAAGTTGAGGGTGATTATCCTTAAGTTGGCTTTTAACTTTATGATGAAATACTAATTTTCACTCTCTGGAAAACATGGAGGTTCCAATGAAGTCATTGGCCTGAAATATATGTGCTATACCATTTAGTCATGCTGTGTGAGGACATCTGACGTTTGCAATGGAACAAAAGATAAAGTAGACTTCAACTTAGGATTCACCAAGTCTGTGGTTGAAAAAATTGTGGTCTCATGTCAGTCTAAGAAGGGGATTGGTAAAAGTCGCCGCCATGTGACCACGAGGTCACAATTTCAAACCGTTGAAAGCTCTTGCAGAAATGCAAGGTAAGGCAGCCTATATGAGAGCCAATGGGGTCTGGGCCTTCCCCAGTCTGTGCATAGGGGGAGCTTAGTGGACCTGTCTGTCCTTTTTCTTTTTCATTTTGGACTAGGGCATCAGCTATTTACAATGGAAAAGAGATAAAAATTCATTTCAGACTAAGTGGTGTTTGAATTGGCTTATTTTTAGTGGTTTCTGGCATTTAAGCATTTCTTTAGTTTTGGAAGTGTTTGGGTAGAAGTGTTTTTAAACACTTATTCAAAGCTGAGAAAGTACAAAAAAGAAGCCAAAAGCCAATAGTTGGGGGTTCCCAACTAATGACTTTTGGCTTTTAGTAACTTATAAGCCACTTAAAAAAAGTCAATCCAAACACACCGTAATATTCAAATATGTGTGAAGTGGCTTGTTGTCTAAGGTCTCATCCGAAGGTGGAGTATTCAACAAATATATTATCCTGCTAGCTAGAATCTATAGGAGAATACTGAAGGAGTGTGAACATTTAGATTAAGGTCATCAGGCGCTCTATTGTATTCTGTTAATATCCTGAGGAATTCTCCTTTGGAAATTAGAGAAGCTTAATTAGCCAATAGGTTGGGAAAAAGAACACATCAACCAGCTAATATTCATCCAAAAAAATCAACTGATGCACAAGCCTTTTCTTTTTTCTTATCAGGATATAGAGCGTCACATTTGTACTCGAGTTACTAGAACTTCACTACTGTTAAAACTTAAAACTGAACTGGGATACTTCTGGATGTGGTTGTTAATGATTATGTGGCTTGAGGGTACTGGGTAGTATATTCATTAACTCAACTAAATAAAAAGAATAAACAAAACAGAGAAAGAAAAAGAACTAATCAACAAAGGAAAAGAATAATTGCCACCCTAATGGATTTAGTTGAATTTAAAATTAACATAAAACTATGTCTCTTATGGGGAAAATCTGATAAATGATTAAAATTAAAAGAAAACCATGTCTCTTATGGAAAATTCCGATAAAGTTGGAAGGATGCAAAAATTAATATAAAACTATTGATCCACTTTGAAATATTATATACATCTTTATGGAGAAAGCCAATCAGCATTAGGTGCTCATGGGATGCATATATGTCAAGTAAAAATGTCTATCTGCTTACCAGATAAGTTTTACTATCTAATTTACAAATTGTGCCAAGTTTGAGGGACTATCTAGGTATTTAGACCAGGTTATTTGTATGATCTACTTTAAAAATGCTTATAAATCAGTAAAGGATACTATATAAATAGACTTTAAGGGGTAAGTGAATCTTATGTTAGAGTTTCAATTAACAAATCTATCAAAAGAGTTAAGTATTTCTCTGACAAATTCAGCCTTTTATATAACAAATTAGTTTCTTATATTTCTTTATATTGTTATGTCTGAAGAAAAAAATTCTCAAACTGCCGAAGGTATAGATAATCCAATGGAAGACAAATCCTCGACTAATAAAAAAAGGAGCTTCTATTTATCTATATTTTCAACAACTTGAGATTTTTTTCCCGGACATAACAATAAGGGGATATTAGAAACTACTTTGTCATATAAAAGATCGAATTTGTTAGAAAAACTGTTAGTTCTTTTGGTCGAGTTGTAATTGAAGCTCTAACATAGAATTCACTTATCTCTTGAAGTCTATTTATATAGTACTTTTACTAGCTTATGAGCATGTTTAAAGTTCACCATATAAATAATCTAGTGTAAATATCTAGATATTTCCTCAAACTTGGCAAAATTTGTAAATAGACACTTAAACTTTGTTTGGTGACTTGATAGACACTCTTACTTGACATATATGTGATAGATTTTATGATCATGGAGTTTAGACTCCATTGTTGCAGATTTCTGCAACTCTAAGGAAATGGCAGTAAGAAAAATCTAGAAGAAGAAGAAGAAGAAGAAAACAAAGAGTTTTTCATATATGCTGAATACAATAATGACTCCTATTTATAGGAATCATGTTATTCTATTTGTTCACACTTTAGGAGTTGAAGTTAGTTACAACTAACTACAAATTGCCTAACTACTTTCATGACTCCTAACTAACTAATACTAACAAACTTAACTACTTATTGGACTATGTAATTCCAATACTCCCCCTCAAGCTGAAATCTCTATAGACATTGAAGACTCCAAGCTTGTTTATCAGTCCAAGATGTTGAGTAACTCCCAGTCCTTTGGTTAGAAGATCTGCTAACTGTTCCTTTGTGTTGATATATTCTGTTTGTATCATTCCATTTTTGATTTTTCCCCTCACAAAATGACAATCAATCTCAATGTGCTTGGTCCTTTCATGAAAAATAGGATTAGCTCCAATTTGAATTGCAGCCTTCATATCACAGTGCAATTTTACAGGAACTATCACATTCACATTAAGTTCTTTTAATACTTCAAGTAACCATGATATTTCCGATACTGCAGCTGCTATGCTCCTATACTCAGCTTCTGCTGACTATATGTTGCTTCTTGGATTTCCAAGAAATGAGTGAATTCCCTAGCTTGATTACATACCCTGTTACTGACTTTCTTGTGTTTGGGCATGATGCCCAGTCTGAGTCACAGAATGCCTCCATTTCATTGCTATCTTCACTGCTAAGTAGTATTCCTTGTCCTGGACATCCTTTAATGTATCTAACCAATCTTAATGCAGCTTCCCAGTGAGACACCTTAGGTTTTTGCATGAACTGTGATAAAACTTGTACTGCAAAACATATATCTGGCCTAGTAGTTGTAAAGTATAACAACCTACCAATTAATCTCTGATGTGCAGTAACATTTGCATATAAAGGATCATCTGTCTTTGCAATGGCTTCATCATATTCAACAGTAGTTAATTTGACACCTGATTCTAGAGGTGTGCTTGCTGGTTTTGAACCTCCAAAGACTACAGTCTGAAATCAACTCCAGTGCATACTTTCTTTGGCTAAGAACAATACCATTTTTTGATCTTAGTACTTCAATACCAAGAAAATACTTTAGATCACCAAGATCTTTCATTTTGAAGTTACTATGTAATGTAGCCTTTAGATCCTGAATCAAAACACTGCTATTTCCAGTTATAAGAAGATCATCTACATAGATCAACACTGCTGCAATATCACCTCCAACTCTCTTTGTGAAAAGAGAATGATCATAAGAACTTTGAGAATAACCAGCAGTAACTAGAGCCTCAGTTAGCTTAAGGTTCCATTGCCTAGAATCTTTCTTCAAGCCATAAAAGACTTCAACAATTTACAGACTTTGTTCTCCCCCTGCCTCTGAAATCCCTAAGGCAAGTCCATGTACACTTCTTCAGTGAGATCACCCTGAAGGAAAGCATTATGGACATCCATTTGAAAAAGAGGCCAACCATGGGATGCTGCAACACTAATCACAGTTCTCACTGTGACCATCTTAGCTACTGGGGAAAAAGTTTCATGATAGTCCAATCCTTCTTGTTGATTATAGCCTTTGGCAACCAACCTAGCCTTGTACCTTTCCACCTTACCATTGGCCTTAAGTTTAACTTTATAAACCCATTTTGAACCAATAGGATGTTTACTAGATGGCAAATCCACTATTGCCCAGGTATTGTTTTGCTCTAAAGCAGCTACTTCAGACTGCATTGCATCCACCCATTGTTGATGTTTGGAGGCTTCCTTGAAGCTGGTGGGTTCCACTATAACTGAGAATCTCTTGATAAAACTTTGATAAGATGGTGTCAAGAGTTCATAGGACAAATTATTAGCAATAGGATATAAACAAGTCATATTGGACTTAGTTGAAACTAAGTAATCTTTATGCCAAAGAGGAGGCTTAGAAGGTTTAGCAGTCCTTCTAGCAGGTGCAAGATCACTTTTACTTATTGAAATTACATAGTCCAATAAGTAGTTAAGTTTGTTAGTATTAGTTAGTTAGGAGTCATGAAAGTAGTTAGGCAACTTGTAGTTAGTTGTAACTAACTTCAACTCCTAAAGTGTGAACAAATAGAATAACATGATTCCTATAAGGAAACATTATTGTATTCAGCATATATGAAAAACTCTCTGTTTCTTCTTCTTCTTCTTCTAGATTTTTCTTACTGCCATTTCCTTAGAGTTGCAGAAATCTGCAACAATGGAGTCTTTAACTCCATGATCATAAAATCTATCATGGTATCAGAGCAGGCGTAACTAGGACTAGTTTGATTTCAAATTTTTCTTTCCGCAAAGTAATTTTTTGAAGCTCAGATTATAGCCATGGCGAACTTACTGTAGCAAAACTTGGACACAATCATCCACTCTATCTGCAGCCTTCAGACATGCCTGGTGTTGCATTGATTACAACAAAGCTCACAGGACTTGAGAATTATGGTCTTTGGAGCAGATCGATGAGATTAGCACTGTTGGTGAAAAATAAGATAAGCTTCATAGATGGAACTTGTTTGAAGAGTATGTACAAGGATGAATTAGCAGTCCAATGGGAAAGATGCAATGCAGTGGTTCTTTCATGGATTAGTAGCACAGTAGCAAACAATATGTTAACAACAATAGTATATGCATCTAATGCAAAACGAGTTTGGGAAGATTTCAAGGAGAGGTTTGATAAATCTAATCTCACTAGGATCTATCAACTCTGGACAGAAGTAGCCACATGAAAGCAAGGTACGGATTCTGTAACAGAGTATTATTCTAAATTGAGGGATTTATGGGATGAGTATGATGTATTGGTGCCCTCACCATCATGTAAATGTGATGATGCTAAGCCTTATATTGAGCATTTACATCAACAAAGATTGATGATGTTCCTGATGGGGTTAAATGAGACTTTCAGTCATGTGAGAAGTGATTTGTTGCTGAAAAGTGAAGTACCTAGCATTAACCAAGCTTATGCAACTGTAATTCAAGAGGAAAGCCAAAGAGTATTAGGTGTAGTGGATTCAAATAAAGAGCCACTTACTATGATGACAGGAAGAGGACAAGGACAAGGATTCAAAGGGAAGAAGGTATTACCAGGCAATTCCAATAATATGAATCTCTTAAGTACCTTATGCTGACATGTCAAATTTGTGTGTATTGCAGTCCACGTTGGCGTGTGAACAAACTATGTCTCTACTGGGAAAAATCCGATAAATAATTAAAATTAACATAAAACTATGTCTCTTGTGGAAAAATTTCGATAAAGTTGGAAGGATGCAAAAATTAACATAAACTATTGATCCACTTTGGAAAATTATATACATCTTTATGGAGAAAGCTAATCAAGCGTGCAACATGCTTTTTTTCTTTTTGATGACCATGATGTTCGGACTAGCTTTTCGTACTTCGTCTAATTCTACAAGATATCTGCCACCTCCCACCAAATACTAGATTATCCATATGGTTAACTAAACATGCTCATAAGCCAGTAAGAGATACAATATAAATAGGCTTTAAGGGATAACTTAATTCTATGTTAGAGTTTCAATTAACAAATCTACAAAAAGAGTAAACTGTTTTTTCTGAAAATTTCACCCTTTCTCAAACTGCTGATGGAATAAATAACCCAATGGAAGCTCCCTTTTAGGGGTATGAGAGAAGAAGTTTGTATGCTATAGGTAGATCAGGACAAATAATTTATTACTGATCAAATGGTTCATTTGCAAGAATTTATGAATATAAAGATGACATTCCTAGAATTTATAATCTCTGTTTCTTTGATATAACTAAATTATGTGTGATTTCATTTTTATTAGAGATTTTCAAGATAGAGATAGTGTTATGATAACAAGGAACAGAGAAATTCAAGATTTATAGGATAAATGAAATTTAAGAAGAGACGATTTTAACTTTGTCAAAAAAAGAAAAGAAAAGAAAAGAAGAGATGATTTTAAAATCACAAGAAAACAAACATGATTTCAATAAAATCGCTAATAAAAAGGAAATCACATAAAATTTAGCTATATCTAAGAATCAAAGATTGTAAGTTCTAGGGATATCATTTTTTGTATCCATAAAATTCTCGCGAATCAACCATCTGATCAATAACACAAATTTCTTCTCTCATGAAAAGGAGCTTCCATTGCGTTATTTGTTTTTCAACAGTTTGAGAATAATTGTTCTTCAGACATAAGAATAAGGAGATATAAGAAACTAATTTATTATATAAAAGAACAAATTGTCAGAGATTTAGTTAACTCTTTTTTGGTAGATTTGTAATTGAAACTCTAGCGTGGAATTCACTTGTCTCTTAAAGCCTGTTGATATAGTATCCTTTACTATCTTATGAGCATGTTTAAAGTTGACTATAAATAATTTAGTCTTAATGCCTAATAGTCCCTCAAAACTTGACACAATTTGTAAATAGATGCTTAAACTTATCTGGCGACTAGATAAACACTTTTACTTGATATATATACATCTCATAAGCACCTAATGTTGGCATTTCAAATTTGTGTGGATTGTACTCCATATTGACTCGTGAACAAATTAAATCAGTCAATTTCTTCTCCACCCCACCCCCCCTGATTTTTTTAATGCATTCTTTTTACATTTTCCTTGGAAATTTTGAACTAAATGATCCTAAAGAATGGTATAAGTGATTGTTTTCTTTATTCTAAACAGAGAACAACTTATAAATTAGGTCATGTTTACGTCAATAAAAATCACAAATTTTACAAATGTTTGAGTTATTACACTATTGAATCGCAATTGAAAATAAATATTTGTTGACTATTCTAAAATTTTGACCAACTTTTATCCTCTTAACAATCAAATTATACGACTGCAGGTTCATTATTTCTTCCTATGAGTATCAAAATGTAAAATTGATGATTGAAATTGATTTAAAGTTATTGAGGATGAGATTAAATTTATTAAGTATTAATTGCACTTCTTAAAACTCATCTAACACTTAATGGTAGTCCTAGTTGACTAAATATTCTTTCACCCGTGCTCATAATATTATTGTTCCAATAGTTCAGATGATGAATGTCATCAGGGGCAGAGCTACCCTTTATCAAGGGTGGTCATCCGGACCCTTTGCCGGGAAATTACAGGAGATATGTAGGTAAAATTTTGGATTTTTTGGTTATATACCGAGTAAGGACACCCTTGATACAACTAAGTTTTGTGGCTCAGCTGTAAAGACAGTTCAGGATGAGCATTGCTACCTTGGTTCAATCCCACATAGAAGCATGTACGACTTTTTTGGGTCTATTTTTCATATTATTTTCCTTCACTTTAGTTTCAGTGAGACCAGCAAGATATATTCTATTTTCCCGCAAGTAATTCTTCAACTCTTTCTGCTTGTAGATTTAGTCACACCCCTTAGGTTCTGGAACAGTCACTTCATTGGCAAGTTTGTGGAGCTCCTCTCTAATCAATAGGCAGTGAATCAAGCTTACTATGCATAAGACTCTTAAATCTGTTTTTTGTTGGAATTGTTGTCAATACAGGGAAGTTTGTGAGGTTGAACTCTGGACTTGGCCAGGTTGCATTTGGCCTTAAACTGTGTTGCTGGGGATCTCCTCCTTCTGGTGTCTGTTTGTTACTCCCTGTCTCCATCACCTGGTTGCAAATCTCCTCAACTCTATTTTGGGAATTAGCTGGCGTAGAACTTTGGCCTTGTTCAGTCTTCTGCTCATTAGTATGAACTTGAGGTCGAGTCAGCCCCTTAAATTGCCATGCTTGCGTCACTGTCTCCCTGCTATAGTTACTAGAACTTCGTTACTGTTAAAACTTAAAACTAAACTGTGATACTTCTGGATGTGGTTGTTAATGAGTATGGGGCTTGAGGGTAGTGTGTACATCTACTGTTTAGTTCAGGATAATGATTTCTTTCATTGAAAGTGAACTGATATTTGTTAACTCAACTAAATAAATAGAAGAAACAAAACAGAAAGAACTAATCAACAAAGGAAAAGAATAATTTCCACCCTAATGGATTAGTTGTATTTAGAATTAACATAAAACTATGTCTCTTCTCTTATGGGGAAATCTGATAAATAATTAAAATTAACATAGAACTATGTCCCTTATGGGAAAATTCCGATAAAGGTGGAAGGCCACAAAAATTAACATAAAACTATTGATCCACTTTGAAAAATAATATACATCTTTATGAAGAAAGCTAATCAGTATTAGGTGCTCATGAGATGCATATATGTCAAGAAAAAGTGTCTATATGGTCACTAGATATGTTTAATGTCTAATTTACAAAGTGTGCCAAGTTTGAGGGACTATCTAGGTATTTAAACTAAATTATTTAGGGATAAAGGGACAAATGCGCCCTAAACTATGACTGGAATCCCAGAGACACTTTAACTAAACTAAGGTCTTATTACCCTCAAGTAATTTTTTTGTAATTTAATACCCCTTTTAGCTTACGTGGCATACTCCATGACTCCATGCAGTTGGTAGTTGAGGCACGTAGAAGATGTTTAGATGTCACGTTAGCCAAAAAGGTGTAAAAAGTTACAAAATAAATTGTTTCTCGGGGGTGGGGGGTGGGGGAGGGATGTAATAGGACTTTAGTTTAGCTAAAACGTGTCTCTAGAATTTCGATCATAGTCTAGGGGTACTTGTGCCTTCCTAATTATTTATGTAGTCAACTTTAAACATGCTCATAAGCCAGTAAAGAATACAATATAAATATACTTTAAGGGGTAAGTGAATTTTGTGTTAGAGTTTCAGTTAACAAATCTAGCAAAAGAGTTGTGTATTTCTCTAACAAATTTAATCATTTTATATATAAAAAAATAGTTTCTTATATCTCCTCATGGTTATGTTTGAAAAAAAGATGCCCCAACTGTTGGAGGAATATATAAATCCAATGAAAGCTCCTTTTTATGGGTATGAGAGAAGTTTGTGTTTTACTGATTTATCATAACTAAAAATTTGTTACTGATCAGATGGTTGCTTTGTGAGAATTCCTAATGCTAGGTTGGGCTCAAAAATTCTCACAAATTAACCATTTGATGAGTATTTAGTTCTGTCATGATCAGTAACGCATAAACTTCTTTTCTCATATCCATAAAAAAGGAGCTTCTATTGAATTATCTATTTCTTCAACATTTGAAATAAGGAGATATAAAAAATTACTTTGTTATATAAAAAGCTGAATTTGTCGAAGGAACACTCTTAACTCTTTTAGTAGATTTGTAATTGAAGCTCTAATCAAGAATTCACTTACCCCTTAAAGCCTATTTATATAATATCCGTTACTGGCTTATGAATATGTTTAGAGTTGACCATATAAATAATTAAGTCTAAATACCTAGATAGTCTTTCAATCTTGGCACAATTTGTCATTTAGACAGTTAAACTTATCAGGTGATCAGATAGACACTTTTACTTTTTAGATGATAAAGTCTTTAATAGCAAGGTTTAAAATATACAAGAACGGTAACTTATCTCTTGATTTTCAAAATTGGACAACTATTTTTAGTATAGTGGACAACTATTGTTGGACGGAGGGAGTATTACTTGTCGTTCTTTAAAAACTCACCTAACACTCAATGGATAGTCTTAGTAGACTAAAGATTCTTTAACACGTGCCCATAATATTAGCGTTCAATAGTTTAGATGATGAATGTCAATATGTCATGTCTTCAAGTAAGGTTAGTGGTCATCTTAGATTTAGGCCTCATTTATTTTGTTGGTATAAATCAGCCCAATGATACTTCTTAACATGGTGCGATATTGTGCCTTGGCCAAGCTGGCCGTTTTTTCTCAGTAGGCCAAATGCCATTGAGAGATCCTACACCTTATCTGTAGCTTCCAAATGTGGAAATTTGTTCTCACACCCAACAATCTTCCCCTCAAACTTACTTCCACATAGTCCATCATCATGAACCACGGGTCATTTCCTAAGATTCATTGCGTCATTCACATCATCTGTTATTTTATGGCAACTGAAGCCCAACATTAGCTTCTTTTTATGTGTGCATCTAGCATTGTATATTTACATAATCTACTGTTGATAGTTCTAGTGTATCCTGGTTCTTTATCTGTGTTTACCAAATCATATCATTGTTGTAGTTTTTTTAAAAGCTGTGAGTGGATTTTGTGCATTGACTTTTCGCAGGAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATC</genome_strand>
        <mrna_strand>CGATTAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTGAGCTCATCTCAGCAACAGGTCCGAGCATGGAAGGAGGTTCTGGTGAAAGTGAGGATGCCCTTTGCATTTTTCTATATGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAG..............................................................................................................................................................ACTAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGCTTTGAGTTTCTCGAATCTGAAGCTAAAACTAATGAGTCTGAAAAGATTGATGCCTTAGAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E453747" ref_strand="+" ref_description="SGN-E453747 [cSTS-21-A17]">
      <seq>gctttactcatgcactattggacgactggaagctgtttgaggttcatagtatagttgcataatttatttctttgtcagagtgtgacacttggggatgaagaggctagcaggagaggcgttcagaaatctgttctggagaggaaaggtccatcatcttttagctgtggggttgagataatctccaaggcagaattgagagttcaccctgatttagaagcaacagtagatgcaattcttgcaggacgttacccaaaatatgaaattcgcaagataaatccaggatcgcaagatggaataatggaaagttcatccatccaagcaccattagatgaaataaatgaagttttgattgaagatataatccagattaatggaggtatacctgattcaactgagctcctctcagcaacaggtccgagcatggaaggaggttctggtgaaagtgaggatgccctttgcatttttctatatggggtattgtagatctcagaggcaagtgtgatgcaagggataaaacagctaagcattgacgataccgttgagtttactgataatatcagtgaagcagatgtgctacttgctctgcagtccaagcttaagaaaaattctcggattcaagcagctgcaagatctcacggcattcctatttatgtgacaaagacaagctcctcaacacagctgacaaaggctatgcangcattaatcagtgattttgctgatggcttttgagtttcttgaatctgaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="55114" stop="52640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54822" g_stop="54580" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="54579" i_stop="54447" i_length="133">
            <donor d_prob="0.754" d_score="1.00"/>
            <acceptor a_prob="0.489" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54446" g_stop="54214" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="474" r_length="233" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54213" i_stop="53371" i_length="843">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.788" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53370" g_stop="53185" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="660" r_length="186" r_score="0.978"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53184" i_stop="53027" i_length="158">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="53026" g_stop="52940" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="748" r_length="88" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E453747" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E453747" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54822" e_stop="54580"/>
          <exon e_start="54446" e_stop="54214"/>
          <exon e_start="53370" e_stop="53185"/>
          <exon e_start="53026" e_stop="52940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTACTCTCATGCACTATTGGATGACTGGAAGCTGTTTGAGGTTTATAGTATAGTTGCATAACTTATTTCTTTGTCAGAGTGTGACACTTGGGGATGAAGAGGCTAGCAGGCGACGCGTTCAGAAATCTGTTCTGGAGAGGAAAGGTCCATCATCTTTTAGCTGTGGGGTTGAGATAATCTCCAAGGCAGAATTGAGAGTTCACCCTGATTTAGAAGCAACAGTAGATGCAATTCTTGCAGGTCTTTTACTAGTCCTCCCTCCTAAATCCTAACAAAACATTTCTGCTGACAAATCATTTGCATATCATCCTGTTGGAAAGCTGATTGAATGTTGTTTAATCGTCTGCCTTGGTGTTAATTTCATGCTGAGAAGGACGTTACCCAAAATATGAAATTCGCAAGATAAATCCAGGATCGCAAGATGGAATTATGGAAATTTCATCCATCCAAGCACCATTAGATGAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTGAGCTCATCTCAGCAACAGGTCCGAGCATGGAAGGAGGTTCTGGTGAAAGTGAGGATGCCCTTTGCATTTTTCTATATGGGGTAAGATGATATTACCATTTACTTGTTCGATAGGAAAAAAGAATGTCATCACTACATTGAATATGTATAAGTTTGGTTAATAACTAAAATCCCAGTCTCAGAATCTGTTCTCTTAGTTCAACTTTAATACCGAGCTAGTATTCGTATTGTTGAAGGGCCTTCGAAAGAGAATCAATTTCCAAAAAGTGAAATACCTCCTAGTACATGATGGTTCTGCATTCGTATACTATTGTTACTTAATTTGCTGCAAAGTTAGTCTCTTTCAATTTGTGGATCTAATAAACCTGATTTGATGCTTCTCCAGTATCCTAATAGTCTCCTTGTTTTCCTATCTTTTCATGTTAAGGTCCCACATACCCCCTTCCTCTGCTGGAAGTGCTTGGTGGCCCCAAACATGAAGTGTAGAAGTATCGAGCAGGAATGATTTTTTTCTTTTGGCTGACTATTCAAATTCAAGCCCCAGCAATTTTTTTTTTTTAAAAAATATTCCTGGAAGAAAAGATCACATGCTTGAATTTTGTCACTCCTTGTATAGGCGGAAAAAGAGTAGATGTTCTTCTATGCTTTAGCTCATTAAGATTTCACCCATTAAAATACTTGTCAAAGACACATTTTAGAATTACAGAGCCTCCTCTTCAAACTTTATATCATCTAATGAAGCATTTGAGTTAATCCACTCTCTTTTCCTTTTAGTTCTCTAAATTTTTTAACTTCTATGAGGGAAAGTGTAGCATAGAATAAGAGATTCTTATGAAGAAAACGTAATAGAAGAGAGGAAAAAACACGATAAAGCTCCATCAGCTTCTATATGGAAACATCTACGTGGAACTCATATTTGAGCAGGTATTGTAGATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAGGTATTTGTTAGAACCAACTTGCAATATCTCCTTATTTGAATGAAAGTTCTGAAGAAAGAAGGAAAAACAAGATGAGTTCTTTTATGCATTATCTGTTGCCTGTGCTGAGTCCGAATTCACTATCCTTGTGTGTATTGAAGTATCTTTTCCTTTTGCAGACTAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGC-TTTGAGTTTCTCGAATCTGAAGCT</genome_strand>
        <mrna_strand>GCTTTA--CTCATGCACTATTGGACGACTGGAAGCTGTTTGAGGTTCATAGTATAGTTGCATAATTTATTTCTTTGTCAGAGTGTGACACTTGGGGATGAAGAGGCTAGCAGGAGAGGCGTTCAGAAATCTGTTCTGGAGAGGAAAGGTCCATCATCTTTTAGCTGTGGGGTTGAGATAATCTCCAAGGCAGAATTGAGAGTTCACCCTGATTTAGAAGCAACAGTAGATGCAATTCTTGCAG.....................................................................................................................................GACGTTACCCAAAATATGAAATTCGCAAGATAAATCCAGGATCGCAAGATGGAATAATGGAAAGTTCATCCATCCAAGCACCATTAGATGAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTGAGCTCCTCTCAGCAACAGGTCCGAGCATGGAAGGAGGTTCTGGTGAAAGTGAGGATGCCCTTTGCATTTTTCTATATGGG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGTAGATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTAAGCATTGACGATACCGTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAG..............................................................................................................................................................ACAAGCTCCTCAACACAGCTGACAAAGGCTATGCANGCATTAATCAGTGATTTTGCTGATGGCTTTTGAGTTTCTTGAATCTGAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E702300" ref_strand="+" ref_description="SGN-E702300 [FA18BD06]">
      <seq>cgaaagagaatcaatttccaaaaagtgaaatacctcctagtacatgatggttctgcattcgtatactattgttacttaatttgctgcaaagttagtctctttcaatttgtggatctaataaacctgatttgatgcttctccagtatcctaatagtctccttgttttcctatcttttcatgttaaggtcccacatacccccttcctctgctggaagtgcttggtggccccaaacatgaagtgtagaagtatcgagcaggaatgatttttttcttttggctgactattcaaattcaagccccagcaattttttttttttaaaaaatattcctggaaaaaaagatcacatgcttgaattttgtcactccttgtataggcggaaaaaaagtaaatgttcttctatgctttagctcattaaaatttcacccattaaaatacttgtcaaagacacattttaaaattacagagcctcctcttcaaactttatatcatctaatgaagcatttgagttaatccactctcttttccttttagttctctaaattttttaacttctatgagggaaagtgtagcataaaataagagattcttatgaagaaaacgtaatagaagagaggaaaaaacacgataaagctccatcagcttctatatggaaacatctacgtggaactcatatttgagcaggtattgtagatctcaaaggcaagtgtgatgcaagggataaaacagcttaacattgacgatacgtttgagtttactgataatatcagtgaagcagatgtgctacttgctctgcagtccaagctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54352" stop="52947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54052" g_stop="53247" g_length="806"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="806" r_length="806" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E702300" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>806</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54052" e_stop="53247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAGAGAATCAATTTCCAAAAAGTGAAATACCTCCTAGTACATGATGGTTCTGCATTCGTATACTATTGTTACTTAATTTGCTGCAAAGTTAGTCTCTTTCAATTTGTGGATCTAATAAACCTGATTTGATGCTTCTCCAGTATCCTAATAGTCTCCTTGTTTTCCTATCTTTTCATGTTAAGGTCCCACATACCCCCTTCCTCTGCTGGAAGTGCTTGGTGGCCCCAAACATGAAGTGTAGAAGTATCGAGCAGGAATGATTTTTTTCTTTTGGCTGACTATTCAAATTCAAGCCCCAGCAATTTTTTTTTTTTAAAAAATATTCCTGGAAGAAAAGATCACATGCTTGAATTTTGTCACTCCTTGTATAGGCGGAAAAAGAGTAGATGTTCTTCTATGCTTTAGCTCATTAAGATTTCACCCATTAAAATACTTGTCAAAGACACATTTTAGAATTACAGAGCCTCCTCTTCAAACTTTATATCATCTAATGAAGCATTTGAGTTAATCCACTCTCTTTTCCTTTTAGTTCTCTAAATTTTTTAACTTCTATGAGGGAAAGTGTAGCATAGAATAAGAGATTCTTATGAAGAAAACGTAATAGAAGAGAGGAAAAAACACGATAAAGCTCCATCAGCTTCTATATGGAAACATCTACGTGGAACTCATATTTGAGCAGGTATTGTAGATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTA</genome_strand>
        <mrna_strand>CGAAAGAGAATCAATTTCCAAAAAGTGAAATACCTCCTAGTACATGATGGTTCTGCATTCGTATACTATTGTTACTTAATTTGCTGCAAAGTTAGTCTCTTTCAATTTGTGGATCTAATAAACCTGATTTGATGCTTCTCCAGTATCCTAATAGTCTCCTTGTTTTCCTATCTTTTCATGTTAAGGTCCCACATACCCCCTTCCTCTGCTGGAAGTGCTTGGTGGCCCCAAACATGAAGTGTAGAAGTATCGAGCAGGAATGATTTTTTTCTTTTGGCTGACTATTCAAATTCAAGCCCCAGCAATTTTTTTTTTTTAAAAAATATTCCTGGAAAAAAAGATCACATGCTTGAATTTTGTCACTCCTTGTATAGGCGGAAAAAAAGTAAATGTTCTTCTATGCTTTAGCTCATTAAAATTTCACCCATTAAAATACTTGTCAAAGACACATTTTAAAATTACAGAGCCTCCTCTTCAAACTTTATATCATCTAATGAAGCATTTGAGTTAATCCACTCTCTTTTCCTTTTAGTTCTCTAAATTTTTTAACTTCTATGAGGGAAAGTGTAGCATAAAATAAGAGATTCTTATGAAGAAAACGTAATAGAAGAGAGGAAAAAACACGATAAAGCTCCATCAGCTTCTATATGGAAACATCTACGTGGAACTCATATTTGAGCAGGTATTGTAGATCTCAAAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E473828" ref_strand="+" ref_description="SGN-E473828 [cSTB-33-L18]">
      <seq>catatgccacaagtgattgtaatcgatgagattggtactaagcttgaggcaatggctgcaagcaccattgcacaacgaggaattcagttagttgcaactgctcatggagtaacaatagagaatttagtaatgaatcctgctttagagatgctggttggaggagtacagagtgtgacacttggggatgaagaggctagcaggagaggcgttcagaaatctgttctggagaggaaaggtccatcatcttttagctgtggggttgagataatctccaaggcagaattgagagttcaccctgatttagaagcaacagtagatgcaattcttgcaggacgttacccaaaatatgaaattcgcaagataaatccaggatcgcaagatggaataatggaaagttcatccatccaaacaccattagatgaaataaatgaagttttgattgaagatataatccagattaatggaggtatacctgattcaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="55929" stop="53994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55629" g_stop="55462" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="55461" i_stop="54743" i_length="719">
            <donor d_prob="0.916" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54742" g_stop="54580" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="331" r_length="163" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="54579" i_stop="54447" i_length="133">
            <donor d_prob="0.754" d_score="1.00"/>
            <acceptor a_prob="0.489" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54446" g_stop="54294" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="484" r_length="153" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E473828" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E473828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55629" e_stop="55462"/>
          <exon e_start="54742" e_stop="54580"/>
          <exon e_start="54446" e_stop="54294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATATGCCACAAGTGATTGTAATCGATGAGATTGGTACTAAGCTTGAGGCAATGGCTGCAAGCACCATTGCACAACGAGGAATTCAGTTAGTTGCAACTGCTCATGGAGTAACAATAGAGAATTTAGTAATGAATCCTGCTTTAGAGATGCTGGTTGGAGGAGTACAGGTAGTTCCCGTTTAACAGAACTTTTTCCAGTTAGTTGTTACATTTAAAACAATTGGGCTGATGCTTAATTAATGGTGAACAATGCTGTTATGCTACAAACGGGTAAGTACGGTAACTTTGTGTTTTTCCAATAAAACGGGTTAGTAGGTAATAGGACTTCTATTTAGAAAGAAGCTAGTAAACAGTCTAGGGGGATCCCACTGTTCCTAGTTGTACCAGATGTGACTTCTTCTTTCCTTTCATATATCATAAGTAGAACGCAAAATCAATATCATTGCAATGAAGTGAACCAATGCATTCTCTACATAATATATGCAATTGCAACACAAGTAGTGCATGAAGGGTAAAAAAACAAAAACAATTTAATTGAAGTGAACCACTGCATTGTCTATATTTTCTATGTAATTGCAACATGAGCTGTGCATGGAGGGTCAGAGGGTGAAAGTCTTTAACTTGGTTGCCTAACTATTTACTCATGGAGGTGTCTTGACATTGATATCTATAATGGATGAGTCCCAAAAGGTTTTCTCAAAAAAAAAAAAAAAAAAAGAAAGAAAAGTGAAGAGTCTCAAAAGATGATATCAACGTCAAACCCACCCTTCGAAATGATGCCATAATACCATTATAGCATGGAGCGACGTTTTACTCTCATGCACTATTGGATGACTGGAAGCTGTTTGAGGTTTATAGTATAGTTGCATAACTTATTTCTTTGTCAGAGTGTGACACTTGGGGATGAAGAGGCTAGCAGGCGACGCGTTCAGAAATCTGTTCTGGAGAGGAAAGGTCCATCATCTTTTAGCTGTGGGGTTGAGATAATCTCCAAGGCAGAATTGAGAGTTCACCCTGATTTAGAAGCAACAGTAGATGCAATTCTTGCAGGTCTTTTACTAGTCCTCCCTCCTAAATCCTAACAAAACATTTCTGCTGACAAATCATTTGCATATCATCCTGTTGGAAAGCTGATTGAATGTTGTTTAATCGTCTGCCTTGGTGTTAATTTCATGCTGAGAAGGACGTTACCCAAAATATGAAATTCGCAAGATAAATCCAGGATCGCAAGATGGAATTATGGAAATTTCATCCATCCAAGCACCATTAGATGAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTG</genome_strand>
        <mrna_strand>CATATGCCACAAGTGATTGTAATCGATGAGATTGGTACTAAGCTTGAGGCAATGGCTGCAAGCACCATTGCACAACGAGGAATTCAGTTAGTTGCAACTGCTCATGGAGTAACAATAGAGAATTTAGTAATGAATCCTGCTTTAGAGATGCTGGTTGGAGGAGTACAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTGTGACACTTGGGGATGAAGAGGCTAGCAGGAGAGGCGTTCAGAAATCTGTTCTGGAGAGGAAAGGTCCATCATCTTTTAGCTGTGGGGTTGAGATAATCTCCAAGGCAGAATTGAGAGTTCACCCTGATTTAGAAGCAACAGTAGATGCAATTCTTGCAG.....................................................................................................................................GACGTTACCCAAAATATGAAATTCGCAAGATAAATCCAGGATCGCAAGATGGAATAATGGAAAGTTCATCCATCCAAACACCATTAGATGAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E476340" ref_strand="+" ref_description="SGN-E476340 [cSTB-44-M22]">
      <seq>cttgctcgcttcccttctggagatttcatcttgtacgatcaaccgattactttggatgatcttcaacaagctacctcgcaggttggcgactttgcagttgacaatagagctggcattagcagaactttacaccgaattagtgctattagaaaccggaaaggtgcaattattggtttaacttgtcgagttggtcgggcaatatctggaagtgcgaactcattgcgagatctagttaaagatggtgcttctttgttgctcattgggccttctggagtaggaaaaacaactattatcagggacatagccaggatgcttgcacatgattatgggaagcgcgtaatgattgcggacacctctaatgaaaatggtgggga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="61393" stop="55710"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61093" g_stop="61013" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61012" i_stop="59498" i_length="1515">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59497" g_stop="59283" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="296" r_length="215" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59282" i_stop="56088" i_length="3195">
            <donor d_prob="0.896" d_score="0.96"/>
            <acceptor a_prob="0.934" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="56087" g_stop="56010" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="374" r_length="78" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E476340" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61093" e_stop="61013"/>
          <exon e_start="59497" e_stop="59283"/>
          <exon e_start="56087" e_stop="56010"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCTCGCTTCCCTTCTGGAGATTTCATCTTATCCGATCAACCGATTACTTTGGGTGATCTTCAACAAGCTACCTCGCAGGTTAGAATTAATTAAATGCAGCACCCATTTCACCTTGAGATATATGTGTGTATATATACATGAGCAGAGGTAGGGTATCAGAAGGGGATTCGAAACCCTTAATTGTAAAATTACACTATATATATAAAAGATTATAGTAAATCTTGAATTTTTGTAGTAAGAATTCTAACTCTACCACTTATTCTGTATACATGGTTATAGAATAGGCATTATACATAAACATACCTTTAACTTGGCTTCATCGAACAAATATGACTTTTAACTTAGGGTGTACAACTGTACACTTAAACTCATATAAAATTGAATAAATAAACACATTCATTCTGAATGAAGTCCTACGTGGTGATTTTGTATCATGTGGCGTCCTATGTGTATTATGCCACGTAGGACGTATGTGTCTACTCGTTCAATTCCATTCATGTATTATGCCTACATGATATGTTGAATGATCTTCGTGAAAGTTATGACTTTACCACTGACTATATACAAGGTTATAATAAATGTTGAATTCCTTTAATGAAGATTTTAGGTCCCCCAATTACTATATACGTGGTTATAGTATATGTTGAATCTGTTTAGTGAGATTTCTGACTCTACCAATTATTATATACAAGGTTATAGTAAATGTTCAATCCATTTAGTGAAAATTCTGACTCTACCACTTGCTATATGCAAGGTTATAGTAAGTGTTTAATGCGCTTAATGAAAATTCTGGGTACACCACTTACTATATACAAGGTTATAATAGATGTTTAATGTTCTTATTGAAAAATCTGGCTCCAGCACTTACTATGTAATACTCACTCTGTCTCAATTTATCAATTTATGTGATGCACTTTTAACTGGAAGTTTAAGGAAGAAAGAAAGACAACACTTCTAGATTGTGGTAAATAACAAACCATAAGTGTGTGTATATATATATATATATATATATATTTCATCAAGTGTAAAATGTGAAGTTTATTGTTAGGTTGTTTTTAATTATAGAAAGGTAATTCTTTTTGGACAGACTTCAAGAATAAATGCATCACATAAGTTGGGGAGAAAGTAGAACGATTTGAAAAATAACATATACTTGCACTAAGTTTCTATCTAGATGAATCGTGAGTGTGCTGATACTTGATACTTACCATCCATGAATTTCAAATCCTAGATTGCTTTTACCTCTAGGAATAATTTGAACTGAAGTTGCAGTGATAGCTTCAATTGAATTAGGAAGGCTTTGATTTTGATCAGGGTCGGCCTTTGCCAACTCCTTTACACACGCACACTTAACGTTGATTAAGTGGAAATTTTGAGGTTGTGCCCAATTGATTAGCAAGTTCCTTTTTTGTGGTTGGTGTTTCAGTGATATGCTCAAAGACACTAGTGATTTAGTTTCAGACTGAATAGTAACTATGACCCTGGAAATACACTAACATAGTCGTTGATAACAACTTACCTACGTCCAAAGCGAAAAGTTAGTACTAGTAACGATTTAGTTAGTACTGTGTTTAATGGTTATTCATATTACAGGTTGGTGACTTTGCAGTTGACAATAGAGCTGGCATTAGCAGAACTTTACACCGAATTAGTGCTATTAGAAATCGGAAAGGTGCAATTATTGGTTTAACTTGTCGAGTTGGTCGTGCAATATCTGGAAGTGCAAACTCATTGCGAGATCTAGTTAAAGATGGTGCGTCTTTGTTGCTCATTGGTCCTCCTGGAGTAGGAAAAACAACTATTATCAGGTTGGTTGTTACATAGACTCTCATGTCATGCCCTCTGATCTTTGATGTGCAATGTCATGAACTTGAGGAACATTTCTGCTGTTTGACCTGAATCTCCTTCTCATTTTAAAGTTAATCGGTGCCATTACATTTCTGGTTGTCACATTAAAAAGATATATTTTTCTTTGAGAAAAGACATAAAGTGACACCTGAAGTTGTCCCTAATTTTCAAGAAGACACCTTAAGTATGTGGTCCTCCTATAACCCCACAAAAGTAATAAATACCTTTGTTAATAGACAGTTTGACCCGTTTCTTCCCTATGTTTGTTTTCACGTAGATGACGCGAGTGAATGAGAAACTTTGCTTCCAAAAATGAATTAAAAACCTCCACTTGTCAGTTTTTTTCTGTTATTTAATTATTTCCTCTTTAATTTTTTCGAAAAAGCGTTGGTTGAAGGTTTAACAAAAATTATCTTCTCTCTTGAATGAAATCAGCCTAAAAAGGTAAGAACTTTCTAACTACTTACTAATTTCCAGTTCAAGGTTTAATTTCTTTAAAATTTGAGAAATCAAGATATATTTTTTGTGATTAAAATAATTTTGTAAAGTCAAGTTCAATCTTGAATCGTATTTGGAATGATGAGAATGATCCGATATTGGTGTGAAGATGCAATGCAAACATGGAACAATGTTTTGGACGGCGAAAGGCGACAAGAGTCTTGCCTCACCAAAAGATGAGTCGAGCGGCGAGGCGCTCGCCTTTTTGAAGTGCGGCACCAATTAAGACCAACAAATTAAAATATTTAATTGCATATGTAAATAATCAAAATCTCAATAGCAATAACATATTAGCAAATATTTCAATTCAAAAACTGAAAATAGGTAGTACATACCAATAGTCTAGAACTTGAATGAACAAACAAAGTACAAAAGTCAAAACAATGAAAAAAAAAACAAAGGTAGAAGTAACTCTGAAGTCTAAAGAAGAAGAAGGAAAAAGAAAGAAAGGAAGAAGAAGAGAAGAAGAAATTAGCAGAAGAAAAGAAGAAATACGTATTGGTTGGAGTTTGGAGTCGCCAGTAAAGTCTGGCTGATTGCCGAGAAGTCAAGTCAAGTCGACTAGTTGGGGTCACAGTCTAAGAGTGCAACTTTCTAAATTTGGAAAGTAAACCCTAAAATGATCTTTTAACTTTTAAAATCCTAAATTGGTCGCCTTTTTTTAAGAAAACACAAAAGGCGGCGCCTTTCTTGCCTCTGTCGTCGTTGTCTCGATGGCGTTGCCTTTTGAAGATCGCCTCGCCACAAAGCTAAAAAGCAATGAAGGTTCGCCTCACATTGCCTCACCTCTAGCCATTTCCTTTCACAACATTGACATGGAAATTCACTTTCAATACAAATTTCTTGGTGGTCCAGTGCCAATTGAAGCACAATTCTAGTGCCAACAGAACCCAACAAGAATGAACCTCTAATTCATCCCACGACTCTTCGAATTTGCAAAAGGAATTTGCGATCATTGAAGCAATTTCATAGAAGAGTTTGACTGGGCTCAAAAAAAGTATATCTATATCCTTGGAGAAATCTTGTATGATTCATGTAAAATTGACTATGGGGTATGATTCTCCGGTAGTTGATCTATCTATGATCAAAGATTCAGCTCATTCCGCAGTCCCATTGGAAAGATCTCAACAGGCGATTTTCTGTGAGAATCGCCTGCGGATGGGTGGCCCCAGATGTGCCTGCAATTTCAATTACCCTCTGACGAGATTCGAGGGGAATCAATCAATGGGGAATACCCCGATTTCCTAACGTACCTTATACTGAAAGCCCACACAAAATGGACGGCGGAATCATAATCGAGGAGAACTCCGGCGATGGCGATAGAGCTCTGGTGAAATTTTCAGGCAACGAGCAATGCCAAAATGAGCATCAGAATGAACTGAACGCAACACAAGAAAAAGCCCCAATTGGTAAGCTTCCTAACAATTCGAATTTGCAAATTAGGGTTAAGCAAATTGGAGGTCTCAGGCAAAGTAATTATGTCCAATTTTCGGGCAATACTCAAAGCCATCAGGTTCATGATATTTGAGGCCAATATAAGTTTGAATCAAGTTCATACTGTTGAAGCTGCAAGCTCTAATTCCAATGCAGACTTGGTTTTACATTTTGGTAAGCTATACCACACAGATGCTGGCTAGCTTTTTCAAGTTTGGAAGCAGGCAGTGGCTTAGCATACCACACATTTGGTAAGCTTTACCGCACATAGCTTGAAACCAGTAAGTAGTTTGATTCTGGATTTTATATCAGGTCCTTGCCAACCCTTTGAAATTTTCTCATTGGCGCTGCTAGTTTGGTATCTAGATATGGCTTCCTGATGTCTCTTTAATTGAGATATAAGCTGAGACTTCTTGCTTTATCTTCGCTTAAGCTCAATTTTGGACAAGTTCAATGTTACTTGAATACGAAGCTCTCATGAAGCCATGGTTCATGGAATAAAACAGGTTTCTTGGCGTATCCAACAGCAGACTTTTTTTTATTGTTGGTAAAATTAAAGATCCTGGACATAATCAATAATATTAAAGTTTTCCAGTTTTTTCATAATGTAATTCTACTTTTTTTCTTCAACTCTTCCTTTTTTTATGAAGTCTTTGTGGGGTTATTTAGCTTAAACTTTTAGTCCCAGGCTAGTTTAGACAATGCTGCTTGTTACTGTAATTTAGTGGAATGATGTATTTATGAAGTGGTGGGAAAATATCGTGGATTTAGCACTTGGTAGTGGGTTGCATACGGGGCTCTTACAATTATTCTGTGTCTTATTCTGTTGCATTTATTGCAAAGGACAGGTGTGTATTTGTTAACATTTCTTATTCAAGGTATGCTTAGTTGTGTATTTTGACTGTTCCCTTTAGATGTTTGTTTCTTGCATTTCCTTCTCATTGTCCACATTATTGGTTAGCTCTAATGTTATGGAAGTCTGTCTAATGTTTGATTTATCAAGGGTTCAGCTGTCTGTATGTACTAATTATTGTATCCCATGCCATGGTGAACACTTTCTCCTTTCATTTCTCCTTGCACACTGATACACATAAAATCCTGCAGTTATAACTTAGCAATGATAGTTCCTCCGCAATGTGCATGTATCTCCTACCATCCCAATAAGCTATTTCCATGAGATTCAGCAGATGGGTATGTAAGGATTTTTTTCTTTATACTCCTAGGGACATAGCCAGGATGCTTGCAAATGATTATAGGAAGCGCGTAATGATTGTGGACACCTCTAATGAAATTGGTGGGGA</genome_strand>
        <mrna_strand>CTTGCTCGCTTCCCTTCTGGAGATTTCATCTTGTACGATCAACCGATTACTTTGGATGATCTTCAACAAGCTACCTCGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGCGACTTTGCAGTTGACAATAGAGCTGGCATTAGCAGAACTTTACACCGAATTAGTGCTATTAGAAACCGGAAAGGTGCAATTATTGGTTTAACTTGTCGAGTTGGTCGGGCAATATCTGGAAGTGCGAACTCATTGCGAGATCTAGTTAAAGATGGTGCTTCTTTGTTGCTCATTGGGCCTTCTGGAGTAGGAAAAACAACTATTATCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGACATAGCCAGGATGCTTGCACATGATTATGGGAAGCGCGTAATGATTGCGGACACCTCTAATGAAAATGGTGGGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E206134" ref_strand="+" ref_description="SGN-E206134 [cLEC-29-D14]">
      <seq>agcaatgctctctttcgctttagtccatcttcatccttcttcttccccaaacccacagttccattttccccacaaaaatcaaattctgccaattcaatcactcaacttttcaccatttactgtaatacccacaaaattgctgagtaaaccctccttctcccgcttattatcttcggtatcgtcgtcttctttggttgctgatgactttcaagtggaattgggtcggttattgtctttgttgccggaggaaatgcggcgaggagttagcgaacacccggaatattccaatttaattgaggtggttatggacttaggtcgtaagccacttgctcgcttcccttctggagatttcatcttatccgatcaaccgattactttgggtgatcttcaacaagctacctcgcaggttggtgactttgcagttgacaatagagctggcattagcagaactttacaccgaattagtgctattagaaatcggaaaggtgcaattattggtttaacttgtcgagttggtcgtgcaatatctggaagtgcaaactcattgcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="61718" stop="59053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="61418" g_stop="61013" g_length="406"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="406" r_length="406" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="61012" i_stop="59498" i_length="1515">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59497" g_stop="59353" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="551" r_length="145" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E206134" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206134" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="61418" e_stop="61013"/>
          <exon e_start="59497" e_stop="59353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCAATGCTCTCTTTCGCTTTAGTCCATCTTCATCCTTCTTCTTCCCCAAACCCACAGTTCCATTTTCCCCACAAAAATCAAATTCTGCCAATTCAATCACTCAACTTTTCACCATTTACTGTAATACCCACAAAATTGCTGAGTAAACCCTCCTTCTCCCGCTTATTATCTTCGGTATCGTCGTCTTCTTTGGTTGCTGATGACTTTCAAGTGGAATTGGGTCGGTTATTGTCTTTGTTGCCGGAGGAAATGCGGCGAGGAGTTAGCGAACACCCGGAATATTCCAATTTAATTGAGGTGGTTATGGACTTAGGTCGTAAGCCACTTGCTCGCTTCCCTTCTGGAGATTTCATCTTATCCGATCAACCGATTACTTTGGGTGATCTTCAACAAGCTACCTCGCAGGTTAGAATTAATTAAATGCAGCACCCATTTCACCTTGAGATATATGTGTGTATATATACATGAGCAGAGGTAGGGTATCAGAAGGGGATTCGAAACCCTTAATTGTAAAATTACACTATATATATAAAAGATTATAGTAAATCTTGAATTTTTGTAGTAAGAATTCTAACTCTACCACTTATTCTGTATACATGGTTATAGAATAGGCATTATACATAAACATACCTTTAACTTGGCTTCATCGAACAAATATGACTTTTAACTTAGGGTGTACAACTGTACACTTAAACTCATATAAAATTGAATAAATAAACACATTCATTCTGAATGAAGTCCTACGTGGTGATTTTGTATCATGTGGCGTCCTATGTGTATTATGCCACGTAGGACGTATGTGTCTACTCGTTCAATTCCATTCATGTATTATGCCTACATGATATGTTGAATGATCTTCGTGAAAGTTATGACTTTACCACTGACTATATACAAGGTTATAATAAATGTTGAATTCCTTTAATGAAGATTTTAGGTCCCCCAATTACTATATACGTGGTTATAGTATATGTTGAATCTGTTTAGTGAGATTTCTGACTCTACCAATTATTATATACAAGGTTATAGTAAATGTTCAATCCATTTAGTGAAAATTCTGACTCTACCACTTGCTATATGCAAGGTTATAGTAAGTGTTTAATGCGCTTAATGAAAATTCTGGGTACACCACTTACTATATACAAGGTTATAATAGATGTTTAATGTTCTTATTGAAAAATCTGGCTCCAGCACTTACTATGTAATACTCACTCTGTCTCAATTTATCAATTTATGTGATGCACTTTTAACTGGAAGTTTAAGGAAGAAAGAAAGACAACACTTCTAGATTGTGGTAAATAACAAACCATAAGTGTGTGTATATATATATATATATATATATATTTCATCAAGTGTAAAATGTGAAGTTTATTGTTAGGTTGTTTTTAATTATAGAAAGGTAATTCTTTTTGGACAGACTTCAAGAATAAATGCATCACATAAGTTGGGGAGAAAGTAGAACGATTTGAAAAATAACATATACTTGCACTAAGTTTCTATCTAGATGAATCGTGAGTGTGCTGATACTTGATACTTACCATCCATGAATTTCAAATCCTAGATTGCTTTTACCTCTAGGAATAATTTGAACTGAAGTTGCAGTGATAGCTTCAATTGAATTAGGAAGGCTTTGATTTTGATCAGGGTCGGCCTTTGCCAACTCCTTTACACACGCACACTTAACGTTGATTAAGTGGAAATTTTGAGGTTGTGCCCAATTGATTAGCAAGTTCCTTTTTTGTGGTTGGTGTTTCAGTGATATGCTCAAAGACACTAGTGATTTAGTTTCAGACTGAATAGTAACTATGACCCTGGAAATACACTAACATAGTCGTTGATAACAACTTACCTACGTCCAAAGCGAAAAGTTAGTACTAGTAACGATTTAGTTAGTACTGTGTTTAATGGTTATTCATATTACAGGTTGGTGACTTTGCAGTTGACAATAGAGCTGGCATTAGCAGAACTTTACACCGAATTAGTGCTATTAGAAATCGGAAAGGTGCAATTATTGGTTTAACTTGTCGAGTTGGTCGTGCAATATCTGGAAGTGCAAACTCATTGCGAG</genome_strand>
        <mrna_strand>AGCAATGCTCTCTTTCGCTTTAGTCCATCTTCATCCTTCTTCTTCCCCAAACCCACAGTTCCATTTTCCCCACAAAAATCAAATTCTGCCAATTCAATCACTCAACTTTTCACCATTTACTGTAATACCCACAAAATTGCTGAGTAAACCCTCCTTCTCCCGCTTATTATCTTCGGTATCGTCGTCTTCTTTGGTTGCTGATGACTTTCAAGTGGAATTGGGTCGGTTATTGTCTTTGTTGCCGGAGGAAATGCGGCGAGGAGTTAGCGAACACCCGGAATATTCCAATTTAATTGAGGTGGTTATGGACTTAGGTCGTAAGCCACTTGCTCGCTTCCCTTCTGGAGATTTCATCTTATCCGATCAACCGATTACTTTGGGTGATCTTCAACAAGCTACCTCGCAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGTGACTTTGCAGTTGACAATAGAGCTGGCATTAGCAGAACTTTACACCGAATTAGTGCTATTAGAAATCGGAAAGGTGCAATTATTGGTTTAACTTGTCGAGTTGGTCGTGCAATATCTGGAAGTGCAAACTCATTGCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E273357" ref_strand="+" ref_description="SGN-E273357 [cLEN-3-L15]">
      <seq>aatttttgttattcttcaaattttctaaagtttttaaaagcattttctttataagatatggatccatcaaatttatacgtacatcctggtccagtagagcatgatgtattaaaaattcaagttcatcatcgttccgaaggaatttggaatggtagcataaaagaagagaaatgttgcttatatacgcgtcgtggtgatattgaattttggcaacatttaaaatatcatccattacattctcgcatccttcaatattttgaaaattgtagatttaaaggaattcttgatgttggatgtgtgccgtatgactccggattaatttctgctttaattgaaaggtggcgtccggaaactcatacttttcacatgcgaactgacgaggctaccataactttacaagatattgaaattttattcggaatggtagtagatggtagtcctataattttaaatggagctgattctttaaggattataggtagacaagaaatgatttttcaattaacaggatggttacccgatactagttgtttttctggtgttagtagattgtcaacatataaattgattgagtatatcgaaggtttggaagttattaacgataactcaactgagcatgaagttcaacaaagatttagattatatttattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="66722" stop="67916"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66857" g_stop="66911" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.764"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66912" i_stop="67036" i_length="125">
            <donor d_prob="0.559" d_score="0.80"/>
            <acceptor a_prob="0.996" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="67037" g_stop="67600" g_length="564"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="621" r_length="566" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E273357" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="0.949" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66857" e_stop="66911"/>
          <exon e_start="67037" e_stop="67600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCCTTTCTGTTTTTCTAATTTTTTAAAGTTTTTAAAAGTCTTTTCTTCGTAAGGTGAGTTTGAATTTATTTTATTTTAATTTATTTAACTAATTTTATATTTTTATATGATATTGTGGATATATTCAATCTTTTGATACTTATATTAATGTTAATATTTTTTTATTTTTTGTGTATAGATATGCATCCGTCAAATGTATACGTACATCCTGATTTAGTAGAGCATGATGTACTAAAAACTCAAGTTCATCATTGTTCCGAAGGAATTTGGAATGGTAGCATAAAAGAAGAGAGGTCTTGCTTATATACGCATCGTGGTGATATTGAATTTTGGCAACATATAAAATATCATCCATTACATTCTCGCATCCGTCAATATTTTGCAAATTGTAGATTTAAAGGATTTCTTGATGTAGGATGTGTGTCGTATGACTCCGGATTAATTTCTACTTTAATTGAAAGGTGGCGTCCAGAAACACATACTTTTCA--TGCGAACTGGCGAGGCTACCATAACTTTACAAGATGTTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGGGCTGATTCTTTAGAGATTATAGGTAGACAAGAAATGATATTTGAATTAACAGGATGGTTACCCGATACTAGTTGTTTTACTGGTGTTAGTAGATTGTTAACATATAAATTGATTGATTATATTGAAGGTTTGGACGGTATTAATGATCACTCAACTGAGCATGAA</genome_strand>
        <mrna_strand>AATTTTTGTTATTCTTCAAATTTTCTAAAGTTTTTAAAAGCATTTTCTTTATAAG.............................................................................................................................ATATGGATCCATCAAATTTATACGTACATCCTGGTCCAGTAGAGCATGATGTATTAAAAATTCAAGTTCATCATCGTTCCGAAGGAATTTGGAATGGTAGCATAAAAGAAGAGAAATGTTGCTTATATACGCGTCGTGGTGATATTGAATTTTGGCAACATTTAAAATATCATCCATTACATTCTCGCATCCTTCAATATTTTGAAAATTGTAGATTTAAAGGAATTCTTGATGTTGGATGTGTGCCGTATGACTCCGGATTAATTTCTGCTTTAATTGAAAGGTGGCGTCCGGAAACTCATACTTTTCACATGCGAACTGACGAGGCTACCATAACTTTACAAGATATTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGAGCTGATTCTTTAAGGATTATAGGTAGACAAGAAATGATTTTTCAATTAACAGGATGGTTACCCGATACTAGTTGTTTTTCTGGTGTTAGTAGATTGTCAACATATAAATTGATTGAGTATATCGAAGGTTTGGAAGTTATTAACGATAACTCAACTGAGCATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E375693" ref_strand="+" ref_description="SGN-E375693 [TUS-35-C3]">
      <seq>tttttttttaaacaagcaaaaaacaatagaattgaaatgagataaaactataatttacaaatatcttagtacatcaaagttccatgtaagcttaagtgggttacacgactcttagctactactatcattcgatatacaattatggagaacatgatgtccaatgatcagagcaatcaattttcgattgatccgtctttcttccagtttctgatgcataatagtcttgcagttgagctacttactgcgtcaaatcaatgccgcgataggagaaactcgcgcactgaaaaactacacatcatagaaacaaacggctccaaaacaagaagaggatttcaaggaaaagctttcaagaacgtgtagcattgtttcgttgaacaaaactaatacctactgacatatagtagattaaaaaaaaatcaccaacaggtctgaccactttcgacttgcaaaatgtgggtgtggtaggaacaaaaccagaaaaatgatcaatacccagtgcagtcgacagaaagaatatccactgccgagtactgaaaacgtcgagattactcacccaatacaagattttccttcacatacacgagtcaatgaccctttgaatgagaagactacagtgatgaatataattagcaaatgatgcactgtatctacggacatcctaaaccacacaccacagcaattaaaatcccatacaactcttgatgatataaaccaaaacattgacaaggctagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="72563" stop="73886"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72854" g_stop="73586" g_length="733"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="733" r_length="733" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E375693" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375693" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72854" e_stop="73586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATTAACAAAACAAGCAAAAAACAATAGAATTGAAATGAGATAAAACTATAATTTACAAATATCTTAGTACATCAAAGTTCCATGTAAGCTTAAGTGGGTTACACGACTCTTAGCTACTACTATCATTCGATATACAATTATGGAGAACATGATGTCCAATGATCAGAGCAATCAATTTTCGATTGATCCGTCTTTCTTCCAGTTTCTGATGCATAATAGTCTTGCAGTTGAGCTACTTACTGCGTCAAATCAATGCCGCGATAGGAGAAACTCGCGCACTGAAAAACTACACATCATAGAAACAAACGGCTCCAAAACAAGAAGAGGATTTCAAGGAAAAGCTTTCAAGAACGTGTAGCATTGTTTCGTTGAACAAAACTAATACCTACTGACATATAGTAGATTAAAAAAAAATCACCAACAGGTCTGACCACTTTCGACTTGCAAAATGTGGGTGTGGTAGGAACAAAACCAGAAAAATGATCAATACCCAGTGCAGTCGACAGAAAGAATATCCACTGCCGAGTACTGAAAACGTCGAGATTACTCACCCAATACAAGATTTTCCTTCACATACACGAGTCAATGACCCTTTGAATGAGAAGACTACAGTGATGAATATAATTAGCAAATGATGCACTGTATCTACGGACATCCTAAACCACACACCACAGCAATTAAAATCCCATACAACTCTTGATGATATAAACCAAAACATTGACAAGGCTAGG</genome_strand>
        <mrna_strand>TTTTTTTTTAAACAAGCAAAAAACAATAGAATTGAAATGAGATAAAACTATAATTTACAAATATCTTAGTACATCAAAGTTCCATGTAAGCTTAAGTGGGTTACACGACTCTTAGCTACTACTATCATTCGATATACAATTATGGAGAACATGATGTCCAATGATCAGAGCAATCAATTTTCGATTGATCCGTCTTTCTTCCAGTTTCTGATGCATAATAGTCTTGCAGTTGAGCTACTTACTGCGTCAAATCAATGCCGCGATAGGAGAAACTCGCGCACTGAAAAACTACACATCATAGAAACAAACGGCTCCAAAACAAGAAGAGGATTTCAAGGAAAAGCTTTCAAGAACGTGTAGCATTGTTTCGTTGAACAAAACTAATACCTACTGACATATAGTAGATTAAAAAAAAATCACCAACAGGTCTGACCACTTTCGACTTGCAAAATGTGGGTGTGGTAGGAACAAAACCAGAAAAATGATCAATACCCAGTGCAGTCGACAGAAAGAATATCCACTGCCGAGTACTGAAAACGTCGAGATTACTCACCCAATACAAGATTTTCCTTCACATACACGAGTCAATGACCCTTTGAATGAGAAGACTACAGTGATGAATATAATTAGCAAATGATGCACTGTATCTACGGACATCCTAAACCACACACCACAGCAATTAAAATCCCATACAACTCTTGATGATATAAACCAAAACATTGACAAGGCTAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E392599" ref_strand="+" ref_description="SGN-E392599 [TUS-35-B4]">
      <seq>ttttttttttaacaagcaaaaaacaatagaattgaaatgagataaaactataatttacaaatatcttagtacatcaaagttccatgtaagcttaagtgggttacacgactcttagctactactatcattcgatatacaattatggagaacatgatgtccaatgatcagagcaatcaattttcgattgatccgtctttcttccagtttctgatgcataatagtcttgcagttgagctacttactgcgtcaaatcaatgccgcgataggagaaactcgcgcactgaaaaactacacatcatagaaacaaacggctccaaaacaagaagaggatttcaaggaaaagctttcaagaacgtgtagcattgtttcgttgaacaaaactaatacctactgacatatagtagattaaaaaaaaatcaccaacaggtctgaccactttcgacttgcaaaatgtgggtgtggtaggaacaaaaccagaaaaatgatcaatacccagtgcagtcgacagaaagaatatccactgccgagtactgaaaacgtcgagattactcacccaatacaagattttccttcacatacacgagtcaatgaccctttgaatgagaagactacagtgatgaatataattagcaaatgatgcactgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="72564" stop="73799"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72854" g_stop="73499" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E392599" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>646</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72854" e_stop="73499"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATTAACAAAACAAGCAAAAAACAATAGAATTGAAATGAGATAAAACTATAATTTACAAATATCTTAGTACATCAAAGTTCCATGTAAGCTTAAGTGGGTTACACGACTCTTAGCTACTACTATCATTCGATATACAATTATGGAGAACATGATGTCCAATGATCAGAGCAATCAATTTTCGATTGATCCGTCTTTCTTCCAGTTTCTGATGCATAATAGTCTTGCAGTTGAGCTACTTACTGCGTCAAATCAATGCCGCGATAGGAGAAACTCGCGCACTGAAAAACTACACATCATAGAAACAAACGGCTCCAAAACAAGAAGAGGATTTCAAGGAAAAGCTTTCAAGAACGTGTAGCATTGTTTCGTTGAACAAAACTAATACCTACTGACATATAGTAGATTAAAAAAAAATCACCAACAGGTCTGACCACTTTCGACTTGCAAAATGTGGGTGTGGTAGGAACAAAACCAGAAAAATGATCAATACCCAGTGCAGTCGACAGAAAGAATATCCACTGCCGAGTACTGAAAACGTCGAGATTACTCACCCAATACAAGATTTTCCTTCACATACACGAGTCAATGACCCTTTGAATGAGAAGACTACAGTGATGAATATAATTAGCAAATGATGCACTGTA</genome_strand>
        <mrna_strand>TTTTTTTTTTAACAAGCAAAAAACAATAGAATTGAAATGAGATAAAACTATAATTTACAAATATCTTAGTACATCAAAGTTCCATGTAAGCTTAAGTGGGTTACACGACTCTTAGCTACTACTATCATTCGATATACAATTATGGAGAACATGATGTCCAATGATCAGAGCAATCAATTTTCGATTGATCCGTCTTTCTTCCAGTTTCTGATGCATAATAGTCTTGCAGTTGAGCTACTTACTGCGTCAAATCAATGCCGCGATAGGAGAAACTCGCGCACTGAAAAACTACACATCATAGAAACAAACGGCTCCAAAACAAGAAGAGGATTTCAAGGAAAAGCTTTCAAGAACGTGTAGCATTGTTTCGTTGAACAAAACTAATACCTACTGACATATAGTAGATTAAAAAAAAATCACCAACAGGTCTGACCACTTTCGACTTGCAAAATGTGGGTGTGGTAGGAACAAAACCAGAAAAATGATCAATACCCAGTGCAGTCGACAGAAAGAATATCCACTGCCGAGTACTGAAAACGTCGAGATTACTCACCCAATACAAGATTTTCCTTCACATACACGAGTCAATGACCCTTTGAATGAGAAGACTACAGTGATGAATATAATTAGCAAATGATGCACTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E253742" ref_strand="+" ref_description="SGN-E253742 [cLEG-32-A18]">
      <seq>ttttttaggtgaaaattattattgtcagatgcatctattgtgtgcagttataactataggtgttccctaacattgaaaatgtggatgctatgctacaactgattgtttgtcgagtacctaaatttcataagtttgtttgcggtttctgggtaagttgtgcgtacgctctacccttcccagacttcacttggtatgttgtttttagcgatttcggtttatataaggtgaaataatcagaccttatctcaaagtccatccagcttttgttgcaaactttttatgtgtgtttcccgaaattgagccagttatgagcttggctgtctctggctttcacctagccttgtcaatgttttggtttatatcatcaagagttgtatgggattttaattgctgtggtgtgtggtttaggatgtccgtagatacagtgcatcatttgctaattatattcatcactgtagtcttctcattcaaagggtcattgactcgtgtatgtgaaggaaaatcttgtattgggtgagtaatctcgacgttttcagtactcggcagtggatattctttctgtcgactgcactgggtattgatcatttttctggttttgttcctaccacacccacattttgcaagtcgaaagtggtcagacctgttggtgatttttttttaatctactatatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="74219" stop="72947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73919" g_stop="73247" g_length="673"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="673" r_length="673" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E253742" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>673</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253742" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73919" e_stop="73247"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATCACTGTAGTCTTCTCATTCAAAGGGTCATTGACTCGTGTATGTGAAGGAAAATCTTGTATTGGGTGAGTAATCTCGACGTTTTCAGTACTCGGCAGTGGATATTCTTTCTGTCGACTGCACTGGGTATTGATCATTTTTCTGGTTTTGTTCCTACCACACCCACATTTTGCAAGTCGAAAGTGGTCAGACCTGTTGGTGATTTTTTTTTAATCTACTATATGT</genome_strand>
        <mrna_strand>TTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATCACTGTAGTCTTCTCATTCAAAGGGTCATTGACTCGTGTATGTGAAGGAAAATCTTGTATTGGGTGAGTAATCTCGACGTTTTCAGTACTCGGCAGTGGATATTCTTTCTGTCGACTGCACTGGGTATTGATCATTTTTCTGGTTTTGTTCCTACCACACCCACATTTTGCAAGTCGAAAGTGGTCAGACCTGTTGGTGATTTTTTTTTAATCTACTATATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E375694" ref_strand="+" ref_description="SGN-E375694 [TUS-35-C3]">
      <seq>ttttttaggtgaaaattattattgtcagatgcatctattgtgtgcagttataactataggtgttccctaacattgaaaatgtggatgctatgctacaactgattgtttgtcgagtacctaaatttcataagtttgtttgcggtttctgggtaagttgtgcgtacgctctacccttcccagacttcacttggtatgttgtttttagcgatttcggtttatataaggtgaaataatcagaccttatctcaaagtccatccagcttttgttgcaaactttttatgtgtgtttcccgaaattgagccagttatgagcttggctgtctctggctttcacctagccttgtcaatgttttggtttatatcatcaagagttgtatgggattttaattgctgtggtgtgtggtttaggatgtccgtagatacagtgcatcatttgctaattatattcatcactgtagtcttctcattcaaagggtcattgactcgtgtatgtgaaggaaaatcttgtattgggtgagtaatctcgacgttttcagtactcggcagtggatattctttctgtcgactgcactgggtattgatcatttttctggttttgttcctaccacacccacattttgcaagtcgaaagtggtcagacctgttggtgatttttttttaatctactatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="74219" stop="72948"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73919" g_stop="73248" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="672" r_length="672" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E375694" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>672</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73919" e_stop="73248"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATCACTGTAGTCTTCTCATTCAAAGGGTCATTGACTCGTGTATGTGAAGGAAAATCTTGTATTGGGTGAGTAATCTCGACGTTTTCAGTACTCGGCAGTGGATATTCTTTCTGTCGACTGCACTGGGTATTGATCATTTTTCTGGTTTTGTTCCTACCACACCCACATTTTGCAAGTCGAAAGTGGTCAGACCTGTTGGTGATTTTTTTTTAATCTACTATATG</genome_strand>
        <mrna_strand>TTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATCACTGTAGTCTTCTCATTCAAAGGGTCATTGACTCGTGTATGTGAAGGAAAATCTTGTATTGGGTGAGTAATCTCGACGTTTTCAGTACTCGGCAGTGGATATTCTTTCTGTCGACTGCACTGGGTATTGATCATTTTTCTGGTTTTGTTCCTACCACACCCACATTTTGCAAGTCGAAAGTGGTCAGACCTGTTGGTGATTTTTTTTTAATCTACTATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E700667" ref_strand="+" ref_description="SGN-E700667 [FA13DC03]">
      <seq>acttgtaagtgtgagaaatggtgatatttgattaaaaatctgcatattgggatattgagtgtttctaaataattttgaatttcaatttttatatgaatggacccaacttgtttgcgagtaagttattgtccacgctggattggtataaatttgcactgagacgtgccactactaaagattttacattgtcatgagtttgtctcaagttgccattataacttgttttagatcgtctttcataattctcccttttttaggtgaaaattattattgtcagatgcatctattgtgtgcagttataactataggtgttccctaacattgaaaatgtggatgctatgctacaactgattgtttgtcgagtacctaaatttcataagtttgtttgcggtttctgggtaagttgtgcgtacgctctacccttcccagacttcacttggtatgttgtttttagcgatttcggtttatataaggtgaaataatcagaccttatctcaaagtccatccagcttttgttgcaaactttttatgtgtgtttcccgaaattgagccagttatgagcttggctgtctctggctttcacctagccttgtcaatgttttggtttatatcatcaagagttgtatgggattttaattgctgtggtgtgtggtttaggatgtccgtagatacagtgcatcatttgctaattatattcatcactgtagtcttctcattcaaagggtcattgactcgtgtatgtgaaggaaaatcttgtattgggtgagtaatctcgacgttttcagtactcggcagtggatattctttctgtccactgcactgggaattgatcatttttctggttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="74468" stop="73022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74168" g_stop="73322" g_length="847"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="847" r_length="847" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E700667" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>847</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E700667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74168" e_stop="73322"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTAGGTGTGAGAAATGGTGATATTTGATTAAAAATCTGCATATTGGGATATTGAGTGTTTCTAAATAATTTTGAATTTCAATTTTTATATGAATGGACCCAACTTGTTTGCGAGTAAGTTATTGTCCACGCTGGATTGGTATAAATTTGCACTGAGACGTGCCACTACTAAAGATTTTACATTGTCATGAGTTTGTCTCAAGTTGCCATTATAACTTGTTTTAGATCGTCTTTCATAATTCTCCCTTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATCACTGTAGTCTTCTCATTCAAAGGGTCATTGACTCGTGTATGTGAAGGAAAATCTTGTATTGGGTGAGTAATCTCGACGTTTTCAGTACTCGGCAGTGGATATTCTTTCTGTCGACTGCACTGGGTATTGATCATTTTTCTGGTTTTG</genome_strand>
        <mrna_strand>ACTTGTAAGTGTGAGAAATGGTGATATTTGATTAAAAATCTGCATATTGGGATATTGAGTGTTTCTAAATAATTTTGAATTTCAATTTTTATATGAATGGACCCAACTTGTTTGCGAGTAAGTTATTGTCCACGCTGGATTGGTATAAATTTGCACTGAGACGTGCCACTACTAAAGATTTTACATTGTCATGAGTTTGTCTCAAGTTGCCATTATAACTTGTTTTAGATCGTCTTTCATAATTCTCCCTTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATCACTGTAGTCTTCTCATTCAAAGGGTCATTGACTCGTGTATGTGAAGGAAAATCTTGTATTGGGTGAGTAATCTCGACGTTTTCAGTACTCGGCAGTGGATATTCTTTCTGTCCACTGCACTGGGAATTGATCATTTTTCTGGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E256812" ref_strand="+" ref_description="SGN-E256812 [cLEG-40-M2]">
      <seq>gaaaattattattgtcagatgcatctattgtgtgcagttataactataggtgttccctaacattgaaaatgtggatgctatgctacaactgattgtttgtcgagtacctaaatttcataagtttgtttgcggtttctgggtaagttgtgcgtacgctctacccttcccagacttcacttggtatgttgtttttagcgatttcggtttatataaggtgaaataatcagaccttatctcaaagtccatccagcttttgttgcaaactttttatgtgtgtttcccgaaattgagccagttatgagcttggctgtctctggctttcacctagccttgtcaatgttttggtttatatcatcaagagttgtatgggattttaattgctgtggtgtgtggtttaggatgtccgtagatacagtgcatcatttgctaattatattcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="74209" stop="73169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73909" g_stop="73469" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E256812" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E256812" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73909" e_stop="73469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATC</genome_strand>
        <mrna_strand>GAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E392340" ref_strand="+" ref_description="SGN-E392340 [TUS-35-B4]">
      <seq>cttttttaggtgaaaattattattgtcagatgcatctattgtgtgcagttataactataggtgttccctaacattgaaaatgtggatgctatgctacaactgattgtttgtcgagtacctaaatttcataagtttgtttgcggtttctgggtaagttgtgcgtacgctctacccttcccagacttcacttggtatgttgtttttagcgatttcggtttatataaggtgaaataatcagaccttatctcaaagtccatccagcttttgttgcaaactttttatgtgtgtttcccgaaattgagccagttatgagcttggctgtctctggctttcacctagccttgtcaatgttttggtttatatcatcaagagttgtatgggattttaattgctgtggtgtgtggttatagatggggggggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="74220" stop="73208"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73920" g_stop="73509" g_length="412"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="412" r_length="412" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E392340" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="0.969" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E392340" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73920" e_stop="73509"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGAT</genome_strand>
        <mrna_strand>CTTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTATAGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E221431" ref_strand="-" ref_description="SGN-E221431 [cLEL-10-E16]">
      <seq>ctgggggtatgtaccaggggatgcattcatattactgaggtgttttgacagcttggtgcagctgcttttagtggttctggatgaatgcagatgtttttaagtctggtttgatgattttgattgctatctactttggcttctgcatttgcaccctttactgatgtccttctacattgtggtagtcaagcggttactttcttcaagagaccttgtgctttttggagttctagttggagtttgtgtttggatataaatatagtaatgtttcgtacgcttttgagccttagaaacgatctgctgtattggaacaacttttagattgctgttgaagttgctgaaattagtttcttatggtatttggaagacctccgtttctttaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="78642" stop="54610"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78342" g_stop="78304" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78303" i_stop="77224" i_length="1080">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77223" g_stop="76877" g_length="347"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="386" r_length="347" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76876" i_stop="76056" i_length="821">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.762" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76055" g_stop="76041" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="401" r_length="15" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E221431" ref_strand="-">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E221431" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="78342" e_stop="78304"/>
          <exon e_start="77223" e_stop="76877"/>
          <exon e_start="76055" e_stop="76041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGGGGTATGTACCAGGGGATGCATTCATATTACTGAGGTAAATTTCTTCCTCTCCATTTTCAGGTGATTATTGTTATTGGTGGTTGGTGCTCTGTGGTGCTCTCAGATTCGGTTGATCTTGGACTTCTGGTCACTTCTGTTAGTTGCTCTAGTTGTCAGTCCCGTGTTCTTTTGGCATCAGTATGCTTTAGATTCTGCCTGTAGAATATTCTTGCTTGAAAATGTTGTGTGTAGGCTTGATTGGAATGATAAACATTTTTGTGACGTGCTTGTAAAGTAGGCTTAATTTTTAATGAGTTTTGAACGTGCTTGCTGATTCTATGATATGGTTGGTGGAATGTGCTTGCTGATTCTATGATATGGTATGAGCTTTACTAGGTAAGACGAGGTGTGATAAAACGACAAAAACTAGAGGAAGGCAAAAACCTCTAAAAAAAAGGTTCCCTTAATGTAGTTAATTGAATTTGTTTTGTGGCAGTATGGTTGATTCACATATATTTGGGCTTTTTGTGTTCTTGAAATTTGTTGAATGCGTCTTAATCAATGTATGTAGATTTTAGAGTGACATTTTGCATTAGGTTAAGGAGCATACACCATTGAACAAACTTTTGTAAATGAAAGTTTATTTGTCTTTTCCCTTTCTTTATTTTTGTGTTATTTATGTGACCTGAATGTTAATTTATTATCTTTTGTTACCTTGAAATTTTGCTTGGAGAACAACAACCAAGAATCCAAGCAATGGGATATTGTCCAAGATCATCTCTTTATTTTTTCTCCGTCTCCGCTTCAATTATCTCGATTGATTAGATTTTGGTTGTGATGATTGTCTGTCACCGTATCTTTCAATGCGTTGTTATCAATTCAAGCTTGATTAGATTGATTTTTGTTGTTCTTCTTACAGATAGTGATTGTGTTGATTGATATTGTCTGTCTTTTGATGGATTGTTCTTAATCCCGGATTGATTAGATTGATTTTCTCTGTTTTTGTACGGTCCTTCTGCATTGCTGTAAAGGTTTTAATTACTGTTATGTTCCTTTCTTTTGAATTCGCTTGAAGATTTGTATTGTTTCTGGATGTAGAATGATCTATTGAGTTGTGAATGGATGTTTGATTCAGGTGTTTTGACAGCTTGGTGCAGCTGCTTTTAGTGGTTCTGGATGAATGCAGATGTTTTTAAGTCTGGTTTGATGATTTTGATTGCTATCTACTTTGGCTTCTGCATTTGCACCCTTTACTGATGTCCTTCTACATTGTGGTAGTCAAGCGGTTACTTTCTTCAAGAGACCTTGTGCTTTTTGGAGTTCTAGTTGGAGTTTGTGTTTGGATATAAATATAGTAATGTTTCGTACGCTTTTGAGCCTTAGAAACGATCTGCTGTATTGGAACAACTTTTAGATTGCTGTTGAAGTTGCTGAAATTAGTTTCTTATGGTATTTGGAAGACCTCCGTTTCTTTACATTTAAATTGTCTGAATCTAGAATTCTTCTTCTTTGTGCCTTTTTCTTTTGCCAACGACTTCATTCTTTTGGATGATGAAGAAGCATTACTTTTATGTGTGCCCAATTGTCTGCGTAGTTGTTCAATATATGTTCGTCAATTATCTTTGAGATTTGAGAGGACGATTTGGAAGAATGAGTTTGTGAACTGGATGGGAGTGCTGTTTGATTCCCTCATTTTGCATATTATTAGAGTCTCCCAAAGGTGTGGTTGGCTAAATTGTATTTCACTTGTTGGTTGCTTGGCTATTTGAGGATGTGAATAACCCTTGTGATGGCTTATAGAAGTCAAGCTACAAGACCTGTCTAAAGTTGATTTTTGGTGCAATCTTGCTGAAGATACTTTTATTTAGGATACATCTATTATTGAAAGTGATTTTTTTTTGGTAATGTGACGTTGTTATTGATGTAAATGAGGGCTTCACTTGTATATAAGCAACATACAAAATGGAGAAGTTCATACAAAAGTATAACTACTTAGTGATCACGCTTGTAATCTATAAGTACTGGATTCTTTTTGGAATTTAATGAGTTGAAAAAGATGATATTTTAATTGTCATTGCAATATAACACGATCATCTAATATGTGCAAGTGAGTTTTAATCCTTTTATTAGGTTTGATTGCTCTCTTAGAACAGGATACCTGAGTGCTAGAGGAGCCATGTTCCAATAGTTACTTTTCCTTTTTCTTCCTATAGTCCAGCTTAAAGTGAAATTGACATTTTCCCACCAATTCTCCTGGTATCACCCATGAATTCCAAAAAGATTCATACTGTTCTATCTGACAGTACAACAACAACAAA</genome_strand>
        <mrna_strand>CTGGGGGTATGTACCAGGGGATGCATTCATATTACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTTGACAGCTTGGTGCAGCTGCTTTTAGTGGTTCTGGATGAATGCAGATGTTTTTAAGTCTGGTTTGATGATTTTGATTGCTATCTACTTTGGCTTCTGCATTTGCACCCTTTACTGATGTCCTTCTACATTGTGGTAGTCAAGCGGTTACTTTCTTCAAGAGACCTTGTGCTTTTTGGAGTTCTAGTTGGAGTTTGTGTTTGGATATAAATATAGTAATGTTTCGTACGCTTTTGAGCCTTAGAAACGATCTGCTGTATTGGAACAACTTTTAGATTGCTGTTGAAGTTGCTGAAATTAGTTTCTTATGGTATTTGGAAGACCTCCGTTTCTTTAAAAAAAA.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E222007" ref_strand="+" ref_description="SGN-E222007 [cLEL-10-E16]">
      <seq>tttttttttttttttttttttttaaagaaacggaggtcttccaaataccataagaaactaatttcagcaacttcaacagcaatctaaaagttgttccaatacagcagatcgtttttaaggctcaaaagcgtacgaaacattactatatttatatccaaacacaaactccaactagaactccaaaaagcacaaggtcttttgaagaaagcaaccgcttgactaccacaatgtagaaggacatcagtaaagggtgcaaatgcagaagccaaagtagattgcaatcaaaatcatcaaaccagactttaaaaaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54610" stop="77471"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76862" g_stop="77171" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E222007" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>310</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E222007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76862" e_stop="77171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAGATTCAGACAATTTAAATGTAAAGAAACGGAGGTCTTCCAAATACCATAAGAAACTAATTTCAGCAACTTCAACAGCAATCTAAAAGTTGTTCCAATACAGCAGATCGTTTCTAAGGCTCAAAAGCGTACGAAACATTACTATATTTATATCCAAACACAAACTCCAACTAGAACTCCAAAAAGCACAAGGTCTCTTGAAGAAAGTAACCGCTTGACTACCACAATGTAGAAGGACATCAGTAAAGGGTGCAAATGCAGAAGCCAAAGTAGATAGCAATCAAAATCATCAAACCAGAC-TTAAAAACA</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTAAAGAAACGGAGGTCTTCCAAATACCATAAGAAACTAATTTCAGCAACTTCAACAGCAATCTAAAAGTTGTTCCAATACAGCAGATCGTTTTTAAGGCTCAAAAGCGTACGAAACATTACTATATTTATATCCAAACACAAACTCCAACTAGAACTCCAAAAAGCACAAGGTCTTTTGAAGAAAGCAACCGCTTGACTACCACAATGTAGAAGGACATCAGTAAAGGGTGCAAATGCAGAAGCCAAAGTAGATTGCAATCAAAATCATCAAACCAGACTTTAAAAACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E541589" ref_strand="-" ref_description="SGN-E541589 [TUS-62-H10]">
      <seq>ggtcattcttcatatggcgggcatggacatggtcccaattcggcattgggtagtggaaatggtatcggtgtgggtggtcctggtggttcatcttatgggaaccaatctgtgggtggtgggtacggttcagggattggtggtccatatggtggggggtctcattatggtggagctggttcagctggatatggcgggttgaccggtagtggttatggcggtgctggggcagtgggaggtgctgctggtggattacctggcgctggtagtacattaggtggtgctggccgtggatcttcaatgtatgggttacccccaagctcagccgggatgccctcgggagattatccaccacagggttctcattacggtcctttacatcaacctcacgggctacaaaaccaaggccctggggcatcagctgcacctagagttgcacctgggggtatgtaccaggggatgcattcatattactgaggtgttttgacagcttggtgcagctgcttttagtggttctggatgaatgcagatgtttttaagtctggtttgatgattttgattgctatctactttggcttctgcatttgcaccctttactgatgtccttctacattgtggtagtcaagcggttactttcttcaagagaccttgtgctttttggagttctagttggagtttgtgtttggatataaatatagtaatgtttcgtacgcttttgagccttagaaacgatctgctgtattggaacaacttttagattgctgttgaagttgctgaaattagtttcttatggtatttggaagacctccgtttcttaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79078" stop="76582"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78778" g_stop="78304" g_length="475"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78303" i_stop="77224" i_length="1080">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77223" g_stop="76874" g_length="350"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="825" r_length="350" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E541589" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>825</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541589" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="78778" e_stop="78304"/>
          <exon e_start="77223" e_stop="76874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCATTCTTCATATGGCGGGCATGGACATGGTCCCAATTCGGCATTGGGTAGTGGAAATGGTATCGGTGTGGGTGGTCCTGGTGGTTCATCTTATGGGAACCAATCTGTGGGTGGTGGGTACGGTTCAGGGATTGGTGGTCCATATGGTGGGGGGTCTCATTATGGTGGAGCTGGTTCAGCTGGATATGGCGGGTTGACCGGTAGTGGTTATGGCGGTGCTGGGGCAGTGGGAGGTGCTGCTGGTGGATTACCTGGCGCTGGTAGTACATTAGGTGGTGCTGGCCGTGGATCTTCAATGTATGGGTTACCCCCAAGCTCAGCCGGGATGCCCTCGGGAGATTATCCACCACAGGGTTCTCATTACGGTCCTTTACATCAACCTCACGGGCTACAAAACCAAGGCCCTGGGGCATCAGCTGCACCTAGAGTTGCACCTGGGGGTATGTACCAGGGGATGCATTCATATTACTGAGGTAAATTTCTTCCTCTCCATTTTCAGGTGATTATTGTTATTGGTGGTTGGTGCTCTGTGGTGCTCTCAGATTCGGTTGATCTTGGACTTCTGGTCACTTCTGTTAGTTGCTCTAGTTGTCAGTCCCGTGTTCTTTTGGCATCAGTATGCTTTAGATTCTGCCTGTAGAATATTCTTGCTTGAAAATGTTGTGTGTAGGCTTGATTGGAATGATAAACATTTTTGTGACGTGCTTGTAAAGTAGGCTTAATTTTTAATGAGTTTTGAACGTGCTTGCTGATTCTATGATATGGTTGGTGGAATGTGCTTGCTGATTCTATGATATGGTATGAGCTTTACTAGGTAAGACGAGGTGTGATAAAACGACAAAAACTAGAGGAAGGCAAAAACCTCTAAAAAAAAGGTTCCCTTAATGTAGTTAATTGAATTTGTTTTGTGGCAGTATGGTTGATTCACATATATTTGGGCTTTTTGTGTTCTTGAAATTTGTTGAATGCGTCTTAATCAATGTATGTAGATTTTAGAGTGACATTTTGCATTAGGTTAAGGAGCATACACCATTGAACAAACTTTTGTAAATGAAAGTTTATTTGTCTTTTCCCTTTCTTTATTTTTGTGTTATTTATGTGACCTGAATGTTAATTTATTATCTTTTGTTACCTTGAAATTTTGCTTGGAGAACAACAACCAAGAATCCAAGCAATGGGATATTGTCCAAGATCATCTCTTTATTTTTTCTCCGTCTCCGCTTCAATTATCTCGATTGATTAGATTTTGGTTGTGATGATTGTCTGTCACCGTATCTTTCAATGCGTTGTTATCAATTCAAGCTTGATTAGATTGATTTTTGTTGTTCTTCTTACAGATAGTGATTGTGTTGATTGATATTGTCTGTCTTTTGATGGATTGTTCTTAATCCCGGATTGATTAGATTGATTTTCTCTGTTTTTGTACGGTCCTTCTGCATTGCTGTAAAGGTTTTAATTACTGTTATGTTCCTTTCTTTTGAATTCGCTTGAAGATTTGTATTGTTTCTGGATGTAGAATGATCTATTGAGTTGTGAATGGATGTTTGATTCAGGTGTTTTGACAGCTTGGTGCAGCTGCTTTTAGTGGTTCTGGATGAATGCAGATGTTTTTAAGTCTGGTTTGATGATTTTGATTGCTATCTACTTTGGCTTCTGCATTTGCACCCTTTACTGATGTCCTTCTACATTGTGGTAGTCAAGCGGTTACTTTCTTCAAGAGACCTTGTGCTTTTTGGAGTTCTAGTTGGAGTTTGTGTTTGGATATAAATATAGTAATGTTTCGTACGCTTTTGAGCCTTAGAAACGATCTGCTGTATTGGAACAACTTTTAGATTGCTGTTGAAGTTGCTGAAATTAGTTTCTTATGGTATTTGGAAGACCTCCGTTTCTTTACATTTAAATT</genome_strand>
        <mrna_strand>GGTCATTCTTCATATGGCGGGCATGGACATGGTCCCAATTCGGCATTGGGTAGTGGAAATGGTATCGGTGTGGGTGGTCCTGGTGGTTCATCTTATGGGAACCAATCTGTGGGTGGTGGGTACGGTTCAGGGATTGGTGGTCCATATGGTGGGGGGTCTCATTATGGTGGAGCTGGTTCAGCTGGATATGGCGGGTTGACCGGTAGTGGTTATGGCGGTGCTGGGGCAGTGGGAGGTGCTGCTGGTGGATTACCTGGCGCTGGTAGTACATTAGGTGGTGCTGGCCGTGGATCTTCAATGTATGGGTTACCCCCAAGCTCAGCCGGGATGCCCTCGGGAGATTATCCACCACAGGGTTCTCATTACGGTCCTTTACATCAACCTCACGGGCTACAAAACCAAGGCCCTGGGGCATCAGCTGCACCTAGAGTTGCACCTGGGGGTATGTACCAGGGGATGCATTCATATTACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTTGACAGCTTGGTGCAGCTGCTTTTAGTGGTTCTGGATGAATGCAGATGTTTTTAAGTCTGGTTTGATGATTTTGATTGCTATCTACTTTGGCTTCTGCATTTGCACCCTTTACTGATGTCCTTCTACATTGTGGTAGTCAAGCGGTTACTTTCTTCAAGAGACCTTGTGCTTTTTGGAGTTCTAGTTGGAGTTTGTGTTTGGATATAAATATAGTAATGTTTCGTACGCTTTTGAGCCTTAGAAACGATCTGCTGTATTGGAACAACTTTTAGATTGCTGTTGAAGTTGCTGAAATTAGTTTCTTATGGTATTTGGAAGACCTCCGTTTCTTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E541592" ref_strand="+" ref_description="SGN-E541592 [TUS-62-H10]">
      <seq>gttcaaacagatggacatggtgatccgatgggtcctgggcaatatggtgcgcctagtggttatggtggattttcaggtcattcttcatatggcgggcatggacatggtcccaattcggcattgggtagtggaaatggtatcggtgtgggtggtcctggtggttcatcttatgggaaccaatctgtgggtggtgggtacggttcagggattggtggtccatatggtggggggtctcattatggtggagctggttcagctggatatggcgggttgaccggtagtggttatggcggtgctggggcagtgggaggtgctgctggtggattacctggcgctggtagtacattaggtggtgctggccgtggatcttcaatgtatgggttacccccaagctcagccgggatgccctcgggagattatccaccacagggttctcattacggtcctttacatcaacctcacgggctacaaaaccaaggccctggggcatcagctgcacctagagttgcacctgggggtatgtaccaggggatgcattcatattactgaggtgttttgacagcttggtgcagctgcttttagtggttctggatgaatgcagatgtttttaagtctggtttgatgattttgattgctatctactttggcttctgcatttgcaccctttactgatgtccttctacattgtggtagtcaagcggttactttcttcaaaagactttgtgctttttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79153" stop="76741"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78853" g_stop="78304" g_length="550"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="550" r_length="550" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="78303" i_stop="77224" i_length="1080">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77223" g_stop="77041" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="733" r_length="183" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E541592" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541592" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78853" e_stop="78304"/>
          <exon e_start="77223" e_stop="77041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCAAACAGATGGACATGGTGATCCGATGGGTCCTGGGCAATATGGTGCGCCTAGTGGTTATGGTGGATTTTCAGGTCATTCTTCATATGGCGGGCATGGACATGGTCCCAATTCGGCATTGGGTAGTGGAAATGGTATCGGTGTGGGTGGTCCTGGTGGTTCATCTTATGGGAACCAATCTGTGGGTGGTGGGTACGGTTCAGGGATTGGTGGTCCATATGGTGGGGGGTCTCATTATGGTGGAGCTGGTTCAGCTGGATATGGCGGGTTGACCGGTAGTGGTTATGGCGGTGCTGGGGCAGTGGGAGGTGCTGCTGGTGGATTACCTGGCGCTGGTAGTACATTAGGTGGTGCTGGCCGTGGATCTTCAATGTATGGGTTACCCCCAAGCTCAGCCGGGATGCCCTCGGGAGATTATCCACCACAGGGTTCTCATTACGGTCCTTTACATCAACCTCACGGGCTACAAAACCAAGGCCCTGGGGCATCAGCTGCACCTAGAGTTGCACCTGGGGGTATGTACCAGGGGATGCATTCATATTACTGAGGTAAATTTCTTCCTCTCCATTTTCAGGTGATTATTGTTATTGGTGGTTGGTGCTCTGTGGTGCTCTCAGATTCGGTTGATCTTGGACTTCTGGTCACTTCTGTTAGTTGCTCTAGTTGTCAGTCCCGTGTTCTTTTGGCATCAGTATGCTTTAGATTCTGCCTGTAGAATATTCTTGCTTGAAAATGTTGTGTGTAGGCTTGATTGGAATGATAAACATTTTTGTGACGTGCTTGTAAAGTAGGCTTAATTTTTAATGAGTTTTGAACGTGCTTGCTGATTCTATGATATGGTTGGTGGAATGTGCTTGCTGATTCTATGATATGGTATGAGCTTTACTAGGTAAGACGAGGTGTGATAAAACGACAAAAACTAGAGGAAGGCAAAAACCTCTAAAAAAAAGGTTCCCTTAATGTAGTTAATTGAATTTGTTTTGTGGCAGTATGGTTGATTCACATATATTTGGGCTTTTTGTGTTCTTGAAATTTGTTGAATGCGTCTTAATCAATGTATGTAGATTTTAGAGTGACATTTTGCATTAGGTTAAGGAGCATACACCATTGAACAAACTTTTGTAAATGAAAGTTTATTTGTCTTTTCCCTTTCTTTATTTTTGTGTTATTTATGTGACCTGAATGTTAATTTATTATCTTTTGTTACCTTGAAATTTTGCTTGGAGAACAACAACCAAGAATCCAAGCAATGGGATATTGTCCAAGATCATCTCTTTATTTTTTCTCCGTCTCCGCTTCAATTATCTCGATTGATTAGATTTTGGTTGTGATGATTGTCTGTCACCGTATCTTTCAATGCGTTGTTATCAATTCAAGCTTGATTAGATTGATTTTTGTTGTTCTTCTTACAGATAGTGATTGTGTTGATTGATATTGTCTGTCTTTTGATGGATTGTTCTTAATCCCGGATTGATTAGATTGATTTTCTCTGTTTTTGTACGGTCCTTCTGCATTGCTGTAAAGGTTTTAATTACTGTTATGTTCCTTTCTTTTGAATTCGCTTGAAGATTTGTATTGTTTCTGGATGTAGAATGATCTATTGAGTTGTGAATGGATGTTTGATTCAGGTGTTTTGACAGCTTGGTGCAGCTGCTTTTAGTGGTTCTGGATGAATGCAGATGTTTTTAAGTCTGGTTTGATGATTTTGATTGCTATCTACTTTGGCTTCTGCATTTGCACCCTTTACTGATGTCCTTCTACATTGTGGTAGTCAAGCGGTTACTTTCTTCAAGAGACCTTGTGCTTTTTGG</genome_strand>
        <mrna_strand>GTTCAAACAGATGGACATGGTGATCCGATGGGTCCTGGGCAATATGGTGCGCCTAGTGGTTATGGTGGATTTTCAGGTCATTCTTCATATGGCGGGCATGGACATGGTCCCAATTCGGCATTGGGTAGTGGAAATGGTATCGGTGTGGGTGGTCCTGGTGGTTCATCTTATGGGAACCAATCTGTGGGTGGTGGGTACGGTTCAGGGATTGGTGGTCCATATGGTGGGGGGTCTCATTATGGTGGAGCTGGTTCAGCTGGATATGGCGGGTTGACCGGTAGTGGTTATGGCGGTGCTGGGGCAGTGGGAGGTGCTGCTGGTGGATTACCTGGCGCTGGTAGTACATTAGGTGGTGCTGGCCGTGGATCTTCAATGTATGGGTTACCCCCAAGCTCAGCCGGGATGCCCTCGGGAGATTATCCACCACAGGGTTCTCATTACGGTCCTTTACATCAACCTCACGGGCTACAAAACCAAGGCCCTGGGGCATCAGCTGCACCTAGAGTTGCACCTGGGGGTATGTACCAGGGGATGCATTCATATTACTGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTTTGACAGCTTGGTGCAGCTGCTTTTAGTGGTTCTGGATGAATGCAGATGTTTTTAAGTCTGGTTTGATGATTTTGATTGCTATCTACTTTGGCTTCTGCATTTGCACCCTTTACTGATGTCCTTCTACATTGTGGTAGTCAAGCGGTTACTTTCTTCAAAAGACTTTGTGCTTTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E298474" ref_strand="+" ref_description="SGN-E298474 [cLET-41-M9]">
      <seq>ttcaaacagatggacatggtgatccgatgggtcctgggcaatatggtgcgcctagtggttatggtggattttcaggtcattcttcatatggcgggcatggacatggtcccaattcggcattgggtagtggaaatggtatcggtgtgggtggtcctggtggttcatcttatgggaaccaatctgtgggtggtgggtacggttcagggattggtggtccatatggtggggggtctcattatggtggagctggttcagctggatatggcgggttgaccggtagtggttatggcggtgctggggcagtgggaggtgctgctggtggattacctggcgctggtagtacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79152" stop="78207"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78852" g_stop="78507" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E298474" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>346</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298474" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78852" e_stop="78507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAACAGATGGACATGGTGATCCGATGGGTCCTGGGCAATATGGTGCGCCTAGTGGTTATGGTGGATTTTCAGGTCATTCTTCATATGGCGGGCATGGACATGGTCCCAATTCGGCATTGGGTAGTGGAAATGGTATCGGTGTGGGTGGTCCTGGTGGTTCATCTTATGGGAACCAATCTGTGGGTGGTGGGTACGGTTCAGGGATTGGTGGTCCATATGGTGGGGGGTCTCATTATGGTGGAGCTGGTTCAGCTGGATATGGCGGGTTGACCGGTAGTGGTTATGGCGGTGCTGGGGCAGTGGGAGGTGCTGCTGGTGGATTACCTGGCGCTGGTAGTACATT</genome_strand>
        <mrna_strand>TTCAAACAGATGGACATGGTGATCCGATGGGTCCTGGGCAATATGGTGCGCCTAGTGGTTATGGTGGATTTTCAGGTCATTCTTCATATGGCGGGCATGGACATGGTCCCAATTCGGCATTGGGTAGTGGAAATGGTATCGGTGTGGGTGGTCCTGGTGGTTCATCTTATGGGAACCAATCTGTGGGTGGTGGGTACGGTTCAGGGATTGGTGGTCCATATGGTGGGGGGTCTCATTATGGTGGAGCTGGTTCAGCTGGATATGGCGGGTTGACCGGTAGTGGTTATGGCGGTGCTGGGGCAGTGGGAGGTGCTGCTGGTGGATTACCTGGCGCTGGTAGTACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E698122" ref_strand="+" ref_description="SGN-E698122 [FA05BC08]">
      <seq>ttttaaactccattgttcggtagagtttttgagctccagaaaatggaccagatgaagaagaggaagcttgaggacaacggcgtcggcactgacgttcctgttgcgaataggctttcgatcgaagatggtcggaagattcttgaatctgttacacctgaacaaatggtagaaatcttacaaaatgctgtcgttcgtcatcccgacgtgcttgatcaagttcgagaaatcgtcgatcgtgaccctactaaaagaaagctttttgttcgtgggcttggctgggaaactacgactgaaaaaatcaggtcaatttttgggacattcggtgagttagaagaagctgttgttattcttgataaaaatactgggaagagcaaaggttatggatttgttacgtttaagcatgttgatggagctttacttgcgttaaagcaaccgagtaaacacgttgatggccgagttacggttactcagcttgcttcagctgggattcaaggtggccctggtggtgggagttcgaataatccagtggatgtgtcgttgaggaagatttatgtatctaatgtgccgtatgatatgcaatccgagaggattttacagcattttttgatgtatggggagatagaggaaggaccgttagggtttgataaggccactgggaagtcaaaagggtatgctttgtttgtgtaccagacggcggaggcagcacagtcttccttggtggatcctgttaagaatattgatgggcatcaattgaactgtaagctggcctattgatggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79969" stop="78593"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79669" g_stop="78893" g_length="777"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="778" r_length="778" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E698122" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>777</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79669" e_stop="78893"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAAACTCCATTGTTCGGTAGAGTTTTTGAGCTCCAGAAAATGGACCAGATGAAGAAGAGGAAGCTTGAGGACAACGGCGTCGGCACTGACGTTCCTGTTGCGAATAGGCTTTCGATCGAAGATGGTCGGAAGATTCTTGAATCTGTTACACCTGAACAAATGGTAGAAATCTTACAAAATGCTGTCGTTCGTCATCCCGACGTGCTTGATCAAGTTCGAGAAATCGTCGATCGTGACCCTACTAAAAGAAAGCTTTTTGTTCGTGGGCTTGGCTGGGAAACTACGACTGAAAAAATCAGGTCAATTTTTGGGACATTCGGTGAGTTAGAAGAAGCTGTTGTTATTCTTGATAAAAATACTGGGAAGAGCAAAGGTTATGGATTTGTTACGTTTAAGCATGTTGATGGAGCTTTACTTGCGTTAAAGCAACCGAGTAAACACGTTGATGGCCGAGTTACGGTTACTCAGCTTGCTTCAGCTGGGATTCAAGGTGGCCCTGGTGGTGGGAGTTCGAATAATCCAGTGGATGTGTCGTTGAGGAAGATTTATGTATCTAATGTGCCGTATGATATGCAATCCGAGAGGATTTTACAGCATTTTTTGATGTATGGGGAGATAGAGGAAGGACCGTTAGGGTTTGATAAGGCCACTGGGAAGTCAAAAGGGTATGCTTTGTTTGTGTACAAGACGGCGGAGGCAGCACAGTCTTCGTTGGTGGATCCTGTTAAGAATATTGATGGGCATCAATTGAACTGTAAGCTGG-CTATTGATGGG</genome_strand>
        <mrna_strand>TTTTAAACTCCATTGTTCGGTAGAGTTTTTGAGCTCCAGAAAATGGACCAGATGAAGAAGAGGAAGCTTGAGGACAACGGCGTCGGCACTGACGTTCCTGTTGCGAATAGGCTTTCGATCGAAGATGGTCGGAAGATTCTTGAATCTGTTACACCTGAACAAATGGTAGAAATCTTACAAAATGCTGTCGTTCGTCATCCCGACGTGCTTGATCAAGTTCGAGAAATCGTCGATCGTGACCCTACTAAAAGAAAGCTTTTTGTTCGTGGGCTTGGCTGGGAAACTACGACTGAAAAAATCAGGTCAATTTTTGGGACATTCGGTGAGTTAGAAGAAGCTGTTGTTATTCTTGATAAAAATACTGGGAAGAGCAAAGGTTATGGATTTGTTACGTTTAAGCATGTTGATGGAGCTTTACTTGCGTTAAAGCAACCGAGTAAACACGTTGATGGCCGAGTTACGGTTACTCAGCTTGCTTCAGCTGGGATTCAAGGTGGCCCTGGTGGTGGGAGTTCGAATAATCCAGTGGATGTGTCGTTGAGGAAGATTTATGTATCTAATGTGCCGTATGATATGCAATCCGAGAGGATTTTACAGCATTTTTTGATGTATGGGGAGATAGAGGAAGGACCGTTAGGGTTTGATAAGGCCACTGGGAAGTCAAAAGGGTATGCTTTGTTTGTGTACCAGACGGCGGAGGCAGCACAGTCTTCCTTGGTGGATCCTGTTAAGAATATTGATGGGCATCAATTGAACTGTAAGCTGGCCTATTGATGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E573416" ref_strand="+" ref_description="SGN-E573416 [32724]">
      <seq>cattgtccgtagagttgttgagctaaaaaaaaatggacttgatgaagaagaggaagcttgaggacaacggcgtcgtcactgacgttcctgttgcgagtaggctttcaatcgaagatgcccggaagattcttgaatctgttacaccagaacaaatgttagaaatcttacaaaatgctgtcgttcgtcatcccgacgtgcttgatcaagttcgagaaatcgtcgatcgtgacgctactaaaagaaagctctttgttcgtgggcttggctgggaaactaccactgaaaaaatcaggtcaatttttgggacattcggtgagttagaagacgctgttgttattctcgataaaaatactgggaagagcaaaggttatggatttgttacgtttaagcatgttgatggagctttacttgcgtttaaagcaaccgagtaaacatattgatggtcgagttacggttactcagcttgcttcagctgggattcaaggtgggccaggtggtgggagttcgaataatccagtggatgtgtcgtcgaggaagatttatgtatctaatgtgccgtatgatcatgcagtccgaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79932" stop="78784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79659" g_stop="79084" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E573416" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E573416" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79659" e_stop="79084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGTTCGGTAGAGTTTTTGAGCT-CCAGAAAATGGACCAGATGAAGAAGAGGAAGCTTGAGGACAACGGCGTCGGCACTGACGTTCCTGTTGCGAATAGGCTTTCGATCGAAGATGGTCGGAAGATTCTTGAATCTGTTACACCTGAACAAATGGTAGAAATCTTACAAAATGCTGTCGTTCGTCATCCCGACGTGCTTGATCAAGTTCGAGAAATCGTCGATCGTGACCCTACTAAAAGAAAGCTTTTTGTTCGTGGGCTTGGCTGGGAAACTACGACTGAAAAAATCAGGTCAATTTTTGGGACATTCGGTGAGTTAGAAGAAGCTGTTGTTATTCTTGATAAAAATACTGGGAAGAGCAAAGGTTATGGATTTGTTACGTTTAAGCATGTTGATGGAGCTTTACTTGCG-TTAAAGCAACCGAGTAAACACGTTGATGGCCGAGTTACGGTTACTCAGCTTGCTTCAGCTGGGATTCAAGGTGGCCCTGGTGGTGGGAGTTCGAATAATCCAGTGGATGTGTCGTTGAGGAAGATTTATGTATCTAATGTGCCGTATGAT-ATGCAATCCGAGA</genome_strand>
        <mrna_strand>CATTG-TCCGTAGAGTTGTTGAGCTAAAAAAAAATGGACTTGATGAAGAAGAGGAAGCTTGAGGACAACGGCGTCGTCACTGACGTTCCTGTTGCGAGTAGGCTTTCAATCGAAGATGCCCGGAAGATTCTTGAATCTGTTACACCAGAACAAATGTTAGAAATCTTACAAAATGCTGTCGTTCGTCATCCCGACGTGCTTGATCAAGTTCGAGAAATCGTCGATCGTGACGCTACTAAAAGAAAGCTCTTTGTTCGTGGGCTTGGCTGGGAAACTACCACTGAAAAAATCAGGTCAATTTTTGGGACATTCGGTGAGTTAGAAGACGCTGTTGTTATTCTCGATAAAAATACTGGGAAGAGCAAAGGTTATGGATTTGTTACGTTTAAGCATGTTGATGGAGCTTTACTTGCGTTTAAAGCAACCGAGTAAACATATTGATGGTCGAGTTACGGTTACTCAGCTTGCTTCAGCTGGGATTCAAGGTGGGCCAGGTGGTGGGAGTTCGAATAATCCAGTGGATGTGTCGTCGAGGAAGATTTATGTATCTAATGTGCCGTATGATCATGCAGTCCGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E317675" ref_strand="+" ref_description="SGN-E317675 [cTOB-8-K5]">
      <seq>aattgtgggaaacaaaataataaagagaagcagttatctgaaacgtatggttgatgcgtctctcaatcttcttctccatgaaattatctccttctcaccttcctatcaataccacacatagcacttttctctccccaacttcagtctgtgcggctgagtatacacgaagcaggctgagcatattaaagttaatctgtcatgcatctatggttcagaaatattccctatcaggctttgctgtttcatccgaaagagaaggctcatataaactggtgtatgccacaaatggctcggcagagatgttgcagctaatgagatgtaatgcaagaagccaaagtgataatgtgtccaaggggcaagttttaactaatgactttcaagaagaggactattccaacaaggacaagggttttaacagcaaggatggtaaggaaaaggaagtagacagaagaagaaagattggattagcaaacagaggaaaagtgccatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="81164" stop="84978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81464" g_stop="81542" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81543" i_stop="84267" i_length="2725">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84268" g_stop="84678" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="490" r_length="411" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E317675" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>490</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317675" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81464" e_stop="81542"/>
          <exon e_start="84268" e_stop="84678"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTGGGAAACAAAATAATAAAGAGAAGCAGTTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCATGTAAGCTCTTACTCGAAAAATCTGATTGCAATTCAGAAACCCCATTTACTTAATTCGAACAAAGATTAAAGCTTTCTGTTTTTTTTTCTTTTTTGTTTTTTTTTTAGCTTTTAAAGAAGTGGCCTTGAATGTTTCTATTTGTTTTTGCTAGATATGAAGTCAAATTTCTAATCTTGTTGTTATGCATTTATTGAGCTTCTTATATAGAGGCGGAGCTATGGTTTTTGAGTTTATGGGTAGTGAGTTCTAAAAAAGAAGAAGCTTATTGGTTCTTGATTAACTATTTATACACATTGAGTGATTTTTTAAACATAAACTCAAGATTTGAGCCGAAACTAGCAGTGAGAGTTCACAAAATTTGAGCAATATGGCCATATTGAGGCAGCTTAGCCCCTATTTATGAAATGTATAGGAAATTCCTTGACCACCCTGAAACTGATTGTTAAGGGATATGCATGACATTGGGTGTATGGGGTGGTGATTTGGGTTAAGATGATTGTTGATATTTGCGAAGCTATCTTTTGATGAGTTGGGTGACTTGTACTTTGGTCCTTCGGGTGAGAAATTCCCAAATGTTTAGTACTACTTTAAATGAAGTTCATAAAGTAGCTCTGTTAAAAATTTGTAAATGAAAGGTACCACAAGTCCTGTTCAAGAACTGAGGTAGACATGCACTTTGATATTTTCCAGTTAGACTTGTAATACAAATTACAAAATATGTTTTCTCGTTGAGCCGTGGGTCTATTGGAAACAACTTCTCTATCTTCCAAGGTAAGGGTAAGGTATGTGTACACATTATGCCCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGCCGTTTTTGCTCACGGATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAAGGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATTTTGTTGTCTGATTATTGATTTTTGGCGAAACCATTTGATCATATGACAAGATGTGTATCTACCTTAACTTAATGATTTTGATAAAAATCATTAGGGGATTCATCAGCATTATGCCCCCAGACTCCATTTGTGGGATACACTCGTCATGTTGTTGCTTGGGTTTGTAATATAATTTTGTCATTTTTGCAGTCATCACTTTTTGATTTAGTTTCTATATCTGAGCCAACTTTTGTAGTCTAATTGTTTCTCCTCTCCTCTCCTTCTCTTATTTTATACTTTCTTTGGTTTTGTCTTGGAAATCAAAACCGTTATGAATCACATCCTGACTGTTCACTTGAGTTCTACTTAAGCTTTACTCTAAATGTTAAGGTCTTCTTTAGTTTTAGCAATTATTGTTCAACTGATTACTCAGTTTCTGGTTTGGTATTCTATTCTACTTTTCGCGCAAAAAGGTGAGACAACTCATGTGTAGCATAGCTTTTTGGGGTAGAAATCGAACAAACCTCTGGCACAACAATTTGTACTAAGAGCAGTGTCATGTTGCCTTGATGGAAATAACTGTTGTTTAGCCAGAAATGAGCAATGGATGTATTGCTTTTGGCTGCATAGTAGGAGGCTTGACTTTGGGTTGCATGTATTTTAATTAGTGTTATTTATCAAATGGATGCAGCTCTGATCTGTATATTTGTTCATTCCTCAGGAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATG</genome_strand>
        <mrna_strand>AATTGTGGGAAACAAAATAATAAAGAGAAGCAGTTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCACAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E412841" ref_strand="+" ref_description="SGN-E412841 [STM-16-L22]">
      <seq>aaatactctaataaagagaagcagttatctgaaacgtatggttgatgcgtctctcaatcttcttctccatgaagttatctccttctcaccttcctatcaataccacacatagcacttttctctcccgaacttcagtctgtgcggctgagtgtacacgaagtaggctgagcatattaaagttaatctgtcatgtatctatggttcagaaatattccctatcatcaggctttgctgtttcatccaaaggagaagactcatataaactgctgtatgccagaaatggcacggcagagatgttgcagttaatgagatgtaatgcaagaaaacgaagtgctaatgtgtccaaggggcaagttttaactgatgaccttcaagaaggggactattccaacacggacaagggttttaacagcaaggatggtaaagaaaaggaagtagacagaagaagaaagattggattagcaaacagaggaaaagtgccatggaacaaaggcagaaaacatagtccagagactcgtgaaaagatcagacagagaaccaaagaagctttgagtgatcccaaggtgaagtcatgtaagacgaaagatgtctgaatgtccacgctctcttagcaatcagaccaagttacgaattcgcgcatctctcagaaagctctggggtgaacgattaaaatggaaaaggtcaagggagaatttttttcagtcatgggctgaaagcattngcaatgctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="81181" stop="87032"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81473" g_stop="81542" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81543" i_stop="84267" i_length="2725">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84268" g_stop="84704" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="510" r_length="440" r_score="0.941"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84705" i_stop="84782" i_length="78">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84783" g_stop="84845" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="511" r_stop="573" r_length="63" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84846" i_stop="85163" i_length="318">
            <donor d_prob="0.767" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85164" g_stop="85201" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="574" r_stop="611" r_length="38" r_score="0.974"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85202" i_stop="86611" i_length="1410">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.927" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="86612" g_stop="86732" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="732" r_length="121" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E412841" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>729</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81473" e_stop="81542"/>
          <exon e_start="84268" e_stop="84704"/>
          <exon e_start="84783" e_stop="84845"/>
          <exon e_start="85164" e_stop="85201"/>
          <exon e_start="86612" e_stop="86732"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAAAATAATAAAGAGAAGCAGTTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCATGTAAGCTCTTACTCGAAAAATCTGATTGCAATTCAGAAACCCCATTTACTTAATTCGAACAAAGATTAAAGCTTTCTGTTTTTTTTTCTTTTTTGTTTTTTTTTTAGCTTTTAAAGAAGTGGCCTTGAATGTTTCTATTTGTTTTTGCTAGATATGAAGTCAAATTTCTAATCTTGTTGTTATGCATTTATTGAGCTTCTTATATAGAGGCGGAGCTATGGTTTTTGAGTTTATGGGTAGTGAGTTCTAAAAAAGAAGAAGCTTATTGGTTCTTGATTAACTATTTATACACATTGAGTGATTTTTTAAACATAAACTCAAGATTTGAGCCGAAACTAGCAGTGAGAGTTCACAAAATTTGAGCAATATGGCCATATTGAGGCAGCTTAGCCCCTATTTATGAAATGTATAGGAAATTCCTTGACCACCCTGAAACTGATTGTTAAGGGATATGCATGACATTGGGTGTATGGGGTGGTGATTTGGGTTAAGATGATTGTTGATATTTGCGAAGCTATCTTTTGATGAGTTGGGTGACTTGTACTTTGGTCCTTCGGGTGAGAAATTCCCAAATGTTTAGTACTACTTTAAATGAAGTTCATAAAGTAGCTCTGTTAAAAATTTGTAAATGAAAGGTACCACAAGTCCTGTTCAAGAACTGAGGTAGACATGCACTTTGATATTTTCCAGTTAGACTTGTAATACAAATTACAAAATATGTTTTCTCGTTGAGCCGTGGGTCTATTGGAAACAACTTCTCTATCTTCCAAGGTAAGGGTAAGGTATGTGTACACATTATGCCCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGCCGTTTTTGCTCACGGATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAAGGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATTTTGTTGTCTGATTATTGATTTTTGGCGAAACCATTTGATCATATGACAAGATGTGTATCTACCTTAACTTAATGATTTTGATAAAAATCATTAGGGGATTCATCAGCATTATGCCCCCAGACTCCATTTGTGGGATACACTCGTCATGTTGTTGCTTGGGTTTGTAATATAATTTTGTCATTTTTGCAGTCATCACTTTTTGATTTAGTTTCTATATCTGAGCCAACTTTTGTAGTCTAATTGTTTCTCCTCTCCTCTCCTTCTCTTATTTTATACTTTCTTTGGTTTTGTCTTGGAAATCAAAACCGTTATGAATCACATCCTGACTGTTCACTTGAGTTCTACTTAAGCTTTACTCTAAATGTTAAGGTCTTCTTTAGTTTTAGCAATTATTGTTCAACTGATTACTCAGTTTCTGGTTTGGTATTCTATTCTACTTTTCGCGCAAAAAGGTGAGACAACTCATGTGTAGCATAGCTTTTTGGGGTAGAAATCGAACAAACCTCTGGCACAACAATTTGTACTAAGAGCAGTGTCATGTTGCCTTGATGGAAATAACTGTTGTTTAGCCAGAAATGAGCAATGGATGTATTGCTTTTGGCTGCATAGTAGGAGGCTTGACTTTGGGTTGCATGTATTTTAATTAGTGTTATTTATCAAATGGATGCAGCTCTGATCTGTATATTTGTTCATTCCTCAGGAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCC--T-ATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAGGTAGCCTTTATATGGATGGCGATATGTTAATTATACGACATATATCTGTGTAGTTTAACTATTTGCAGTACCTTGCAGAGACTCGTGAGAAGATCAGACAGAGAACCAAAGAAGCTTTGCGTGATCCCAAGGTGAAGTCATGTAAGAATCAATTGTACGAAGTCTTTCATGTTGCGTTTACTTTTAAAATAGATATGAAGCATGTGCTGTTGTTAGATAAAGAAAGTTTGTTTAGTTCACAATTTTTTAAAATGTCCAACTGTTTATACTTTTGGTTTTGCTTTGAAGTTTTGACTTGCACATGAAAGACCACAATCCACTGCTCTTTTTCCTTTGTTTTCCCTCAAAGCATTCCTTCTGACAAATAGGAACTTACAATTGTAGCATGATAATGTACTGACCACTCTGATACATATATATCATTCTCTTTCTCCTAAAATATATTTTATCTTATTTCAGGTAAGACAAAAGATGTCTGAATGTCCACGCTCTCTTAGGTATTTTCGCTCTCGTCTTTATTATGCTATATTTTGAAAAAGTATGCAATTATACAGCTATACGTCATTGCATGTTGATAAGATATTCACATCTGCTAGTCTACGAGCGCTCTGAAAAGCTTAGGATTTTGGTATGTGTAATGAGAGTTCTTGCCCAAAGTAACATTCACTAGGTTCGTTAAGTGCAAGAGTTAGCTTGGTTGTATGAGAACTTTAATTTTAGGATTTGGGACAATCTCGAGGAATTGTTACAGATGAGTAGGGGACACCTAAGTTAAGTCAACAAGAATGTGTTTGTATATGTCTGTGGTACGTGTCAGCTTTTTGGTAAATTGATTCTCTCTCGATCTGTCTAAGTTCAAGCTAAAGATACTGTTGAGAAGAAAGTACTACATCATAGAGAAGGGAATACCCTTGGCATAGAGAGATAACAAAGAAAGCGCTATGTTAAGTAAAAATATTTTGCTTAAAGTTCCAACTGCTAGCTCCCAGTTCTTCTTGCTTTGTATGTGCTTCTGGCTAGCCACAATCATTTTCGCTGATCAGATATCTATTTAAGCGATTTCAGCTGGTTACAGAGCTTTGTGACCTCCTCTTATTGTCTTTATTTATTTATTTTTGGATGGAGCACCTCCTCTGTCATTTCTGACCAGAATAACTAAATAGTGGTTCACTGTCTCAATCTGAATAAATCATACTAACCCATCTGTCAAACTTCAGGTTATAAAAGAAAGTTTAGTTTCCTCATTGTGAAACGTTAATTTACTAGAATGTATCAACAAAATCATTGCCACCATAAGTTATCTTCCAAAGGAAAGAGGGGTCACAAGGAACAAATCAGGCTGAAATGTTGTCCACATGATTTTGCAAAGAGGAATATCAAGATATAAGAGCTTTAAAAGCTCCCTCTAAGTCAAGAGGCAAATTTTCAGCAGACCTGCACCCTGTTTCAAACTGTGCGCACAACCAGTCATAGTTGACCAGCAAGAAGAACCTGCTCCTGCTAAGCCGCACATAAACTGCTAAGTTTGTGGCATTAGATATTTACTTTCATAATTTCATGTTCATCCTATGCATAGGTTGTGTGATGACGTCTAAAATCAATCCAAACAATAGTTCTGCTCCCTTTTTAAATTTGTTTTAAGAACTTTAATCACTGGTTTGAAATTTTAGAAGTAATTTAGTAGAGGATGCATGCTATTGTGTGGTGTCTTGACCTTCGGTGCTAACCTTTGTGATCACTAGGAAGTTGCAAGTATAGCCAAAAGTCTCTCTTTACTCTGTTATTGAAGGATAGGAATGGTTTGATATCACTCTAACTGCAGCATGAATAGTTCACCATAAATAATAACTTGCAAAATAGACCTTTTCCATATAAAACTGGAAGTTCATAATAACTCTCTTTTGCAGCAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATTAAAATGGAAAAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGCT</genome_strand>
        <mrna_strand>AAATACTCTAATAAAGAGAAGCAGTTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCGAACTTCAGTCTGTGCGGCTGAGTGTACACGAAGTAGGCTGAGCATATTAAAGTTAATCTGTCATGTATCTATGGTTCAGAAATATTCCCTATCATCAGGCTTTGCTGTTTCATCCAAAGGAGAAGACTCATATAAACTGCTGTATGCCAGAAATGGCACGGCAGAGATGTTGCAGTTAATGAGATGTAATGCAAGAAAACGAAGTGCTAATGTGTCCAAGGGGCAAGTTTTAACTGATGACCTTCAAGAAGGGGACTATTCCAACACGGACAAGGGTTTTAACAGCAAGGATGGTAAAGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAG..............................................................................AGACTCGTGAAAAGATCAGACAGAGAACCAAAGAAGCTTTGAGTGATCCCAAGGTGAAGTCAT..............................................................................................................................................................................................................................................................................................................................GTAAGACGAAAGATGTCTGAATGTCCACGCTCTCTTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAGACCAAGTTACGAATTCGCGCATCTCTCAGAAAGCTCTGGGGTGAACGATTAAAATGGAAAAGGTCAAGGGAGAATTTTTTTCAGTCATGGGCTGAAAGCATTNGCAATGCTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E471259" ref_strand="+" ref_description="SGN-E471259 [cSTB-23-I16]">
      <seq>aaatactctaataaagagaagcagttatctgaaacgtatgggggaggcgtctctcaatcttcttctccatgaagttatctccttctcaccttcctatcaataccacacatagcacttttctctcccgaacttcagtctgtgcggctgagtgtacacgaagtaggctgagcatattaaagttaatctgtcatgtatctatggttcagaaatattccctatcatcaggctttgctgtttcatccaaaggagaagactcatataaactgctgtatgccagaaatggcacggcagagatgttgcagttaatgagatgtaatgcaagaaaacgaagtgctaatgtgtccaaggggcaagttttaactgatgaccttcaagaaggggactattccaacacggacaagggttttaacagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="81181" stop="84907"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81473" g_stop="81542" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81543" i_stop="84267" i_length="2725">
            <donor d_prob="0.967" d_score="0.94"/>
            <acceptor a_prob="0.930" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84268" g_stop="84607" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="413" r_length="343" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E471259" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E471259" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81473" e_stop="81542"/>
          <exon e_start="84268" e_stop="84607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAAAATAATAAAGAGAAGCAGTTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCATGTAAGCTCTTACTCGAAAAATCTGATTGCAATTCAGAAACCCCATTTACTTAATTCGAACAAAGATTAAAGCTTTCTGTTTTTTTTTCTTTTTTGTTTTTTTTTTAGCTTTTAAAGAAGTGGCCTTGAATGTTTCTATTTGTTTTTGCTAGATATGAAGTCAAATTTCTAATCTTGTTGTTATGCATTTATTGAGCTTCTTATATAGAGGCGGAGCTATGGTTTTTGAGTTTATGGGTAGTGAGTTCTAAAAAAGAAGAAGCTTATTGGTTCTTGATTAACTATTTATACACATTGAGTGATTTTTTAAACATAAACTCAAGATTTGAGCCGAAACTAGCAGTGAGAGTTCACAAAATTTGAGCAATATGGCCATATTGAGGCAGCTTAGCCCCTATTTATGAAATGTATAGGAAATTCCTTGACCACCCTGAAACTGATTGTTAAGGGATATGCATGACATTGGGTGTATGGGGTGGTGATTTGGGTTAAGATGATTGTTGATATTTGCGAAGCTATCTTTTGATGAGTTGGGTGACTTGTACTTTGGTCCTTCGGGTGAGAAATTCCCAAATGTTTAGTACTACTTTAAATGAAGTTCATAAAGTAGCTCTGTTAAAAATTTGTAAATGAAAGGTACCACAAGTCCTGTTCAAGAACTGAGGTAGACATGCACTTTGATATTTTCCAGTTAGACTTGTAATACAAATTACAAAATATGTTTTCTCGTTGAGCCGTGGGTCTATTGGAAACAACTTCTCTATCTTCCAAGGTAAGGGTAAGGTATGTGTACACATTATGCCCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGCCGTTTTTGCTCACGGATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAAGGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATTTTGTTGTCTGATTATTGATTTTTGGCGAAACCATTTGATCATATGACAAGATGTGTATCTACCTTAACTTAATGATTTTGATAAAAATCATTAGGGGATTCATCAGCATTATGCCCCCAGACTCCATTTGTGGGATACACTCGTCATGTTGTTGCTTGGGTTTGTAATATAATTTTGTCATTTTTGCAGTCATCACTTTTTGATTTAGTTTCTATATCTGAGCCAACTTTTGTAGTCTAATTGTTTCTCCTCTCCTCTCCTTCTCTTATTTTATACTTTCTTTGGTTTTGTCTTGGAAATCAAAACCGTTATGAATCACATCCTGACTGTTCACTTGAGTTCTACTTAAGCTTTACTCTAAATGTTAAGGTCTTCTTTAGTTTTAGCAATTATTGTTCAACTGATTACTCAGTTTCTGGTTTGGTATTCTATTCTACTTTTCGCGCAAAAAGGTGAGACAACTCATGTGTAGCATAGCTTTTTGGGGTAGAAATCGAACAAACCTCTGGCACAACAATTTGTACTAAGAGCAGTGTCATGTTGCCTTGATGGAAATAACTGTTGTTTAGCCAGAAATGAGCAATGGATGTATTGCTTTTGGCTGCATAGTAGGAGGCTTGACTTTGGGTTGCATGTATTTTAATTAGTGTTATTTATCAAATGGATGCAGCTCTGATCTGTATATTTGTTCATTCCTCAGGAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCC--T-ATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGC</genome_strand>
        <mrna_strand>AAATACTCTAATAAAGAGAAGCAGTTATCTGAAACGTATGGGGGAGGCGTCTCTCAATCTTCTTCTCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCGAACTTCAGTCTGTGCGGCTGAGTGTACACGAAGTAGGCTGAGCATATTAAAGTTAATCTGTCATGTATCTATGGTTCAGAAATATTCCCTATCATCAGGCTTTGCTGTTTCATCCAAAGGAGAAGACTCATATAAACTGCTGTATGCCAGAAATGGCACGGCAGAGATGTTGCAGTTAATGAGATGTAATGCAAGAAAACGAAGTGCTAATGTGTCCAAGGGGCAAGTTTTAACTGATGACCTTCAAGAAGGGGACTATTCCAACACGGACAAGGGTTTTAACAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E322400" ref_strand="+" ref_description="SGN-E322400 [cTOB-24-H20]">
      <seq>ttatctgaaacgtatggttgatgcgtctctcaatcttcttctccatgaaattatctccttctcaccttcctatcaataccacacatagcacttttctctccccaacttcagtctgtgcggctgagtatacacgaagcaggctgagcatattaaagttaatctgtcatgcatctatggttcagaaatattccctatcaggctttgctgtttcatccgaaagagaaggctcatataaactggtgtatgccagaaatggctcggcagagatgttgcagctaatgagatgtaatgcaagaagccaaagtgataatgtgtccaaggggcaagttttaactaatgactttcaagaagaggactattccaacaaggacaagggttttaacagcaaggatggtaaggaaaaggaagtagacagaagaagaaagattggattagcaaacagaggaaaagtgccatggaacaaaggcagaaaacatagtccagagactcgtgagaagatcagacagagaaccaaagaagctttgcgtgatcccaaggtgaagtcatgtaagacaaaagatgtctgaatgtccacgctctcttagcaatcagaccaagttacgaatacgcgcatctctcagaaaactctggggtgaacgattaaaatggaaaggtcacgggagaaatttttcagtcatgggctgaaagcattgcaatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="81197" stop="87031"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81497" g_stop="81542" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81543" i_stop="84267" i_length="2725">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84268" g_stop="84704" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="483" r_length="437" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84705" i_stop="84782" i_length="78">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84783" g_stop="84845" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="546" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84846" i_stop="85163" i_length="318">
            <donor d_prob="0.767" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85164" g_stop="85201" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="584" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85202" i_stop="86611" i_length="1410">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="86612" g_stop="86731" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="701" r_length="117" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E322400" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322400" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81497" e_stop="81542"/>
          <exon e_start="84268" e_stop="84704"/>
          <exon e_start="84783" e_stop="84845"/>
          <exon e_start="85164" e_stop="85201"/>
          <exon e_start="86612" e_stop="86731"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCATGTAAGCTCTTACTCGAAAAATCTGATTGCAATTCAGAAACCCCATTTACTTAATTCGAACAAAGATTAAAGCTTTCTGTTTTTTTTTCTTTTTTGTTTTTTTTTTAGCTTTTAAAGAAGTGGCCTTGAATGTTTCTATTTGTTTTTGCTAGATATGAAGTCAAATTTCTAATCTTGTTGTTATGCATTTATTGAGCTTCTTATATAGAGGCGGAGCTATGGTTTTTGAGTTTATGGGTAGTGAGTTCTAAAAAAGAAGAAGCTTATTGGTTCTTGATTAACTATTTATACACATTGAGTGATTTTTTAAACATAAACTCAAGATTTGAGCCGAAACTAGCAGTGAGAGTTCACAAAATTTGAGCAATATGGCCATATTGAGGCAGCTTAGCCCCTATTTATGAAATGTATAGGAAATTCCTTGACCACCCTGAAACTGATTGTTAAGGGATATGCATGACATTGGGTGTATGGGGTGGTGATTTGGGTTAAGATGATTGTTGATATTTGCGAAGCTATCTTTTGATGAGTTGGGTGACTTGTACTTTGGTCCTTCGGGTGAGAAATTCCCAAATGTTTAGTACTACTTTAAATGAAGTTCATAAAGTAGCTCTGTTAAAAATTTGTAAATGAAAGGTACCACAAGTCCTGTTCAAGAACTGAGGTAGACATGCACTTTGATATTTTCCAGTTAGACTTGTAATACAAATTACAAAATATGTTTTCTCGTTGAGCCGTGGGTCTATTGGAAACAACTTCTCTATCTTCCAAGGTAAGGGTAAGGTATGTGTACACATTATGCCCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGCCGTTTTTGCTCACGGATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAAGGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATTTTGTTGTCTGATTATTGATTTTTGGCGAAACCATTTGATCATATGACAAGATGTGTATCTACCTTAACTTAATGATTTTGATAAAAATCATTAGGGGATTCATCAGCATTATGCCCCCAGACTCCATTTGTGGGATACACTCGTCATGTTGTTGCTTGGGTTTGTAATATAATTTTGTCATTTTTGCAGTCATCACTTTTTGATTTAGTTTCTATATCTGAGCCAACTTTTGTAGTCTAATTGTTTCTCCTCTCCTCTCCTTCTCTTATTTTATACTTTCTTTGGTTTTGTCTTGGAAATCAAAACCGTTATGAATCACATCCTGACTGTTCACTTGAGTTCTACTTAAGCTTTACTCTAAATGTTAAGGTCTTCTTTAGTTTTAGCAATTATTGTTCAACTGATTACTCAGTTTCTGGTTTGGTATTCTATTCTACTTTTCGCGCAAAAAGGTGAGACAACTCATGTGTAGCATAGCTTTTTGGGGTAGAAATCGAACAAACCTCTGGCACAACAATTTGTACTAAGAGCAGTGTCATGTTGCCTTGATGGAAATAACTGTTGTTTAGCCAGAAATGAGCAATGGATGTATTGCTTTTGGCTGCATAGTAGGAGGCTTGACTTTGGGTTGCATGTATTTTAATTAGTGTTATTTATCAAATGGATGCAGCTCTGATCTGTATATTTGTTCATTCCTCAGGAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAGGTAGCCTTTATATGGATGGCGATATGTTAATTATACGACATATATCTGTGTAGTTTAACTATTTGCAGTACCTTGCAGAGACTCGTGAGAAGATCAGACAGAGAACCAAAGAAGCTTTGCGTGATCCCAAGGTGAAGTCATGTAAGAATCAATTGTACGAAGTCTTTCATGTTGCGTTTACTTTTAAAATAGATATGAAGCATGTGCTGTTGTTAGATAAAGAAAGTTTGTTTAGTTCACAATTTTTTAAAATGTCCAACTGTTTATACTTTTGGTTTTGCTTTGAAGTTTTGACTTGCACATGAAAGACCACAATCCACTGCTCTTTTTCCTTTGTTTTCCCTCAAAGCATTCCTTCTGACAAATAGGAACTTACAATTGTAGCATGATAATGTACTGACCACTCTGATACATATATATCATTCTCTTTCTCCTAAAATATATTTTATCTTATTTCAGGTAAGACAAAAGATGTCTGAATGTCCACGCTCTCTTAGGTATTTTCGCTCTCGTCTTTATTATGCTATATTTTGAAAAAGTATGCAATTATACAGCTATACGTCATTGCATGTTGATAAGATATTCACATCTGCTAGTCTACGAGCGCTCTGAAAAGCTTAGGATTTTGGTATGTGTAATGAGAGTTCTTGCCCAAAGTAACATTCACTAGGTTCGTTAAGTGCAAGAGTTAGCTTGGTTGTATGAGAACTTTAATTTTAGGATTTGGGACAATCTCGAGGAATTGTTACAGATGAGTAGGGGACACCTAAGTTAAGTCAACAAGAATGTGTTTGTATATGTCTGTGGTACGTGTCAGCTTTTTGGTAAATTGATTCTCTCTCGATCTGTCTAAGTTCAAGCTAAAGATACTGTTGAGAAGAAAGTACTACATCATAGAGAAGGGAATACCCTTGGCATAGAGAGATAACAAAGAAAGCGCTATGTTAAGTAAAAATATTTTGCTTAAAGTTCCAACTGCTAGCTCCCAGTTCTTCTTGCTTTGTATGTGCTTCTGGCTAGCCACAATCATTTTCGCTGATCAGATATCTATTTAAGCGATTTCAGCTGGTTACAGAGCTTTGTGACCTCCTCTTATTGTCTTTATTTATTTATTTTTGGATGGAGCACCTCCTCTGTCATTTCTGACCAGAATAACTAAATAGTGGTTCACTGTCTCAATCTGAATAAATCATACTAACCCATCTGTCAAACTTCAGGTTATAAAAGAAAGTTTAGTTTCCTCATTGTGAAACGTTAATTTACTAGAATGTATCAACAAAATCATTGCCACCATAAGTTATCTTCCAAAGGAAAGAGGGGTCACAAGGAACAAATCAGGCTGAAATGTTGTCCACATGATTTTGCAAAGAGGAATATCAAGATATAAGAGCTTTAAAAGCTCCCTCTAAGTCAAGAGGCAAATTTTCAGCAGACCTGCACCCTGTTTCAAACTGTGCGCACAACCAGTCATAGTTGACCAGCAAGAAGAACCTGCTCCTGCTAAGCCGCACATAAACTGCTAAGTTTGTGGCATTAGATATTTACTTTCATAATTTCATGTTCATCCTATGCATAGGTTGTGTGATGACGTCTAAAATCAATCCAAACAATAGTTCTGCTCCCTTTTTAAATTTGTTTTAAGAACTTTAATCACTGGTTTGAAATTTTAGAAGTAATTTAGTAGAGGATGCATGCTATTGTGTGGTGTCTTGACCTTCGGTGCTAACCTTTGTGATCACTAGGAAGTTGCAAGTATAGCCAAAAGTCTCTCTTTACTCTGTTATTGAAGGATAGGAATGGTTTGATATCACTCTAACTGCAGCATGAATAGTTCACCATAAATAATAACTTGCAAAATAGACCTTTTCCATATAAAACTGGAAGTTCATAATAACTCTCTTTTGCAGCAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATTAAAATGGAAAAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGC</genome_strand>
        <mrna_strand>TTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAG..............................................................................AGACTCGTGAGAAGATCAGACAGAGAACCAAAGAAGCTTTGCGTGATCCCAAGGTGAAGTCAT..............................................................................................................................................................................................................................................................................................................................GTAAGACAAAAGATGTCTGAATGTCCACGCTCTCTTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATTAAAATGG-AAAGGTCACGGGAGAAA-TTTTTCAGTCATGGGCTGAAAGCATTGC-AATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E322167" ref_strand="+" ref_description="SGN-E322167 [cTOB-24-K20]">
      <seq>ttatctgaaacgtatggttgatgcgtctctcaatcttcttctccatgaaattatctccttctcaccttcctatcaataccacacatagcacttttctctccccaacttcagtctgtgcggctgagtatacacgaagcaggctgagcatattaaagttaatctgtcatgcatctatggttcagaaatattccctatcaggctttgctgtttcatccgaaagagaaggctcatataaactggtgtatgccagaaatggctcggcagagatgttgcagctaatgagatgtaatgcaagaagccaaagtgataatgtgtccaaggggcaagttttaactaatgactttcaagaagaggactattccaacaaggacaagggttttaacagcaaggatggtaaggaaaaggaagtagacagaagaagaaagattggattagcaaacagaggaaaagtgccatggaacaaaggcagaaaacatagtccagagactcgtgagaagatcagacagagaaccaaagaagctttgcgtgatcccaaggtgaagtcatgtaagacaaaagatgtctgaatgtccacgctctcttagcaatcagaccaagttacgaatacgcgcatctctcagaaaactctggggtgaacgattaaatggaaaagtcacgggagaaatttttcagtcatgggctgaaagcattgcaatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="81197" stop="87030"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81497" g_stop="81542" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81543" i_stop="84267" i_length="2725">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84268" g_stop="84704" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="483" r_length="437" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84705" i_stop="84782" i_length="78">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84783" g_stop="84845" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="546" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84846" i_stop="85163" i_length="318">
            <donor d_prob="0.767" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85164" g_stop="85201" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="584" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="85202" i_stop="86611" i_length="1410">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.927" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="86612" g_stop="86730" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="699" r_length="115" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E322167" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E322167" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81497" e_stop="81542"/>
          <exon e_start="84268" e_stop="84704"/>
          <exon e_start="84783" e_stop="84845"/>
          <exon e_start="85164" e_stop="85201"/>
          <exon e_start="86612" e_stop="86730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCATGTAAGCTCTTACTCGAAAAATCTGATTGCAATTCAGAAACCCCATTTACTTAATTCGAACAAAGATTAAAGCTTTCTGTTTTTTTTTCTTTTTTGTTTTTTTTTTAGCTTTTAAAGAAGTGGCCTTGAATGTTTCTATTTGTTTTTGCTAGATATGAAGTCAAATTTCTAATCTTGTTGTTATGCATTTATTGAGCTTCTTATATAGAGGCGGAGCTATGGTTTTTGAGTTTATGGGTAGTGAGTTCTAAAAAAGAAGAAGCTTATTGGTTCTTGATTAACTATTTATACACATTGAGTGATTTTTTAAACATAAACTCAAGATTTGAGCCGAAACTAGCAGTGAGAGTTCACAAAATTTGAGCAATATGGCCATATTGAGGCAGCTTAGCCCCTATTTATGAAATGTATAGGAAATTCCTTGACCACCCTGAAACTGATTGTTAAGGGATATGCATGACATTGGGTGTATGGGGTGGTGATTTGGGTTAAGATGATTGTTGATATTTGCGAAGCTATCTTTTGATGAGTTGGGTGACTTGTACTTTGGTCCTTCGGGTGAGAAATTCCCAAATGTTTAGTACTACTTTAAATGAAGTTCATAAAGTAGCTCTGTTAAAAATTTGTAAATGAAAGGTACCACAAGTCCTGTTCAAGAACTGAGGTAGACATGCACTTTGATATTTTCCAGTTAGACTTGTAATACAAATTACAAAATATGTTTTCTCGTTGAGCCGTGGGTCTATTGGAAACAACTTCTCTATCTTCCAAGGTAAGGGTAAGGTATGTGTACACATTATGCCCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGCCGTTTTTGCTCACGGATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAAGGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATTTTGTTGTCTGATTATTGATTTTTGGCGAAACCATTTGATCATATGACAAGATGTGTATCTACCTTAACTTAATGATTTTGATAAAAATCATTAGGGGATTCATCAGCATTATGCCCCCAGACTCCATTTGTGGGATACACTCGTCATGTTGTTGCTTGGGTTTGTAATATAATTTTGTCATTTTTGCAGTCATCACTTTTTGATTTAGTTTCTATATCTGAGCCAACTTTTGTAGTCTAATTGTTTCTCCTCTCCTCTCCTTCTCTTATTTTATACTTTCTTTGGTTTTGTCTTGGAAATCAAAACCGTTATGAATCACATCCTGACTGTTCACTTGAGTTCTACTTAAGCTTTACTCTAAATGTTAAGGTCTTCTTTAGTTTTAGCAATTATTGTTCAACTGATTACTCAGTTTCTGGTTTGGTATTCTATTCTACTTTTCGCGCAAAAAGGTGAGACAACTCATGTGTAGCATAGCTTTTTGGGGTAGAAATCGAACAAACCTCTGGCACAACAATTTGTACTAAGAGCAGTGTCATGTTGCCTTGATGGAAATAACTGTTGTTTAGCCAGAAATGAGCAATGGATGTATTGCTTTTGGCTGCATAGTAGGAGGCTTGACTTTGGGTTGCATGTATTTTAATTAGTGTTATTTATCAAATGGATGCAGCTCTGATCTGTATATTTGTTCATTCCTCAGGAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAGGTAGCCTTTATATGGATGGCGATATGTTAATTATACGACATATATCTGTGTAGTTTAACTATTTGCAGTACCTTGCAGAGACTCGTGAGAAGATCAGACAGAGAACCAAAGAAGCTTTGCGTGATCCCAAGGTGAAGTCATGTAAGAATCAATTGTACGAAGTCTTTCATGTTGCGTTTACTTTTAAAATAGATATGAAGCATGTGCTGTTGTTAGATAAAGAAAGTTTGTTTAGTTCACAATTTTTTAAAATGTCCAACTGTTTATACTTTTGGTTTTGCTTTGAAGTTTTGACTTGCACATGAAAGACCACAATCCACTGCTCTTTTTCCTTTGTTTTCCCTCAAAGCATTCCTTCTGACAAATAGGAACTTACAATTGTAGCATGATAATGTACTGACCACTCTGATACATATATATCATTCTCTTTCTCCTAAAATATATTTTATCTTATTTCAGGTAAGACAAAAGATGTCTGAATGTCCACGCTCTCTTAGGTATTTTCGCTCTCGTCTTTATTATGCTATATTTTGAAAAAGTATGCAATTATACAGCTATACGTCATTGCATGTTGATAAGATATTCACATCTGCTAGTCTACGAGCGCTCTGAAAAGCTTAGGATTTTGGTATGTGTAATGAGAGTTCTTGCCCAAAGTAACATTCACTAGGTTCGTTAAGTGCAAGAGTTAGCTTGGTTGTATGAGAACTTTAATTTTAGGATTTGGGACAATCTCGAGGAATTGTTACAGATGAGTAGGGGACACCTAAGTTAAGTCAACAAGAATGTGTTTGTATATGTCTGTGGTACGTGTCAGCTTTTTGGTAAATTGATTCTCTCTCGATCTGTCTAAGTTCAAGCTAAAGATACTGTTGAGAAGAAAGTACTACATCATAGAGAAGGGAATACCCTTGGCATAGAGAGATAACAAAGAAAGCGCTATGTTAAGTAAAAATATTTTGCTTAAAGTTCCAACTGCTAGCTCCCAGTTCTTCTTGCTTTGTATGTGCTTCTGGCTAGCCACAATCATTTTCGCTGATCAGATATCTATTTAAGCGATTTCAGCTGGTTACAGAGCTTTGTGACCTCCTCTTATTGTCTTTATTTATTTATTTTTGGATGGAGCACCTCCTCTGTCATTTCTGACCAGAATAACTAAATAGTGGTTCACTGTCTCAATCTGAATAAATCATACTAACCCATCTGTCAAACTTCAGGTTATAAAAGAAAGTTTAGTTTCCTCATTGTGAAACGTTAATTTACTAGAATGTATCAACAAAATCATTGCCACCATAAGTTATCTTCCAAAGGAAAGAGGGGTCACAAGGAACAAATCAGGCTGAAATGTTGTCCACATGATTTTGCAAAGAGGAATATCAAGATATAAGAGCTTTAAAAGCTCCCTCTAAGTCAAGAGGCAAATTTTCAGCAGACCTGCACCCTGTTTCAAACTGTGCGCACAACCAGTCATAGTTGACCAGCAAGAAGAACCTGCTCCTGCTAAGCCGCACATAAACTGCTAAGTTTGTGGCATTAGATATTTACTTTCATAATTTCATGTTCATCCTATGCATAGGTTGTGTGATGACGTCTAAAATCAATCCAAACAATAGTTCTGCTCCCTTTTTAAATTTGTTTTAAGAACTTTAATCACTGGTTTGAAATTTTAGAAGTAATTTAGTAGAGGATGCATGCTATTGTGTGGTGTCTTGACCTTCGGTGCTAACCTTTGTGATCACTAGGAAGTTGCAAGTATAGCCAAAAGTCTCTCTTTACTCTGTTATTGAAGGATAGGAATGGTTTGATATCACTCTAACTGCAGCATGAATAGTTCACCATAAATAATAACTTGCAAAATAGACCTTTTCCATATAAAACTGGAAGTTCATAATAACTCTCTTTTGCAGCAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATTAAAATGGAAAAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTG</genome_strand>
        <mrna_strand>TTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAG..............................................................................AGACTCGTGAGAAGATCAGACAGAGAACCAAAGAAGCTTTGCGTGATCCCAAGGTGAAGTCAT..............................................................................................................................................................................................................................................................................................................................GTAAGACAAAAGATGTCTGAATGTCCACGCTCTCTTAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATT-AAATGGAAAA-GTCACGGGAGAAA-TTTTTCAGTCATGGGCTGAAAGCATTGC-AATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E265341" ref_strand="+" ref_description="SGN-E265341 [cLEI-9-B12]">
      <seq>tgaaacgtatggttgatgcgtctctcaatcttcttctccatgaaattatctccttctcaccttcctatcaataccacacatagcacttttctctccccaacttcagtctgtgcggctgagtatacacgaagcaggctgagcatattaaagttaatctgtcatgcatctatggttcagaaatattccctatcaggctttgctgtttcatccgaaagagaaggctcatataaactggtgtatgccagaaatggctcggcagagatgttgcagctaatgagatgtaatgcaagaagccaaagtgataatgtgtccaaggggcaaggtttaactaatgactttcaagaagaggactattgcaacaaggacaagggttttaacagcaaggatggtaaggaaaaggaagtagacagaagaagaaagattggattagcaaacagaggaaaagtgccatggaacaaaggcagaaaacatagtccagagactcgtgagaagatcagacagagaaccgaagaagctttgcgtgatcccaaggtgaagtcatgtaagacaaaagatgtctgaatgtccacgctctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="81202" stop="85497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81502" g_stop="81542" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81543" i_stop="84267" i_length="2725">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.930" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84268" g_stop="84704" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="478" r_length="437" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="84705" i_stop="84782" i_length="78">
            <donor d_prob="0.907" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="84783" g_stop="84845" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="541" r_length="63" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="84846" i_stop="85163" i_length="318">
            <donor d_prob="0.767" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="85164" g_stop="85197" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="575" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E265341" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81502" e_stop="81542"/>
          <exon e_start="84268" e_stop="84704"/>
          <exon e_start="84783" e_stop="84845"/>
          <exon e_start="85164" e_stop="85197"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCATGTAAGCTCTTACTCGAAAAATCTGATTGCAATTCAGAAACCCCATTTACTTAATTCGAACAAAGATTAAAGCTTTCTGTTTTTTTTTCTTTTTTGTTTTTTTTTTAGCTTTTAAAGAAGTGGCCTTGAATGTTTCTATTTGTTTTTGCTAGATATGAAGTCAAATTTCTAATCTTGTTGTTATGCATTTATTGAGCTTCTTATATAGAGGCGGAGCTATGGTTTTTGAGTTTATGGGTAGTGAGTTCTAAAAAAGAAGAAGCTTATTGGTTCTTGATTAACTATTTATACACATTGAGTGATTTTTTAAACATAAACTCAAGATTTGAGCCGAAACTAGCAGTGAGAGTTCACAAAATTTGAGCAATATGGCCATATTGAGGCAGCTTAGCCCCTATTTATGAAATGTATAGGAAATTCCTTGACCACCCTGAAACTGATTGTTAAGGGATATGCATGACATTGGGTGTATGGGGTGGTGATTTGGGTTAAGATGATTGTTGATATTTGCGAAGCTATCTTTTGATGAGTTGGGTGACTTGTACTTTGGTCCTTCGGGTGAGAAATTCCCAAATGTTTAGTACTACTTTAAATGAAGTTCATAAAGTAGCTCTGTTAAAAATTTGTAAATGAAAGGTACCACAAGTCCTGTTCAAGAACTGAGGTAGACATGCACTTTGATATTTTCCAGTTAGACTTGTAATACAAATTACAAAATATGTTTTCTCGTTGAGCCGTGGGTCTATTGGAAACAACTTCTCTATCTTCCAAGGTAAGGGTAAGGTATGTGTACACATTATGCCCTGAGAGATCCCCTCATAATTTCCCCAAAGCGTAACCATGTGTGAATAAATTTTGAGCTAGTAGGGTTGCAGCCACGAGTAAGTCTTCCCTTGTTATTGTGTAGCCAGAATGCCGCAAAACTTCCATGCCTAAGCGAACTGTTGAGAGTACGTTTCGATTTCTGACTGTGTTAGCCTGGAAGTGCTTGTCCCAACCTTGTTTCTGAGCATGAACGCCCGCAAGCCAACATGTTAGTTGAAGCATCAGGGCGATTAGCAGCATGATATCAAAACGCTCTGAGCTGCTCGTTCGGCTATGGCGTAGGCCTAGTCCGTAGGCAGGACTTTTCAAGTCTCGGAAGGTTTCTTCAATCTGCATTCGCTTCGAATAGATATTAACAAGTTGTTTGGGTGTTCGAATTTCAACAGGTAAGTTAGTTGCTAGAATCCATGGCTCCTTTGCCGACGCTGAGTAGATTTTAGGTGACGGGTGGTGACAATGAGTCCGTGTCGAGCGCTGATTTTTTCGGCCTTTAGAGCGAGATTTATACAATAGAATTTGGCATGAGATTGGATTGCTTTTAGTCAGCCTCTTATAGCCTAAAGTCTTTGAGTGACTAGATGACATATCATGTAAGTTGCTGATAGGTTTCCAGTTTTCCGCTCCTAGGTCTGCATATTGTACTTTTCCTCTTACTCGACTTAACCAGTACCAACCCAGCTTCTCAACGGATTTATACCATGGCACTTTAAAGCCAGCATCACTGACAATGAGCGGTGTGGTGTTACTCGGTAGAATGCTCGCAAGGTCGGCTAGAAATTGGTCATGAGCTTTCTTTGAACATTGCTCTGAAAGCGGGAACGCTTTCTCATAAAGAGTAACAGAACGACCGTGTAGTGCGACTGAAGCTCGCAATACCATAAGCCGTTTTTGCTCACGGATATCAGACCAGTCAACAAGTACAATGGGCATCGTATTGCCCGAACAGATAAAGCTAGCATGCCAACGGTATACAGCGAGTCGCTCTTTGTGGAGGTGACGATTACCTAACAATCGGTCGATTCGTTTGATGTTATGTTTTGTTCTCGCTTTGGTTGGCAGGTTACGGCCAAGTTCGGTAAGAGTGAGAGTTTTACAGTCAAGTAAGGCGTGGCAAGCCAACGTTAAGCTGTTGAGTCGTTTTAAGTGTAATTCGGGGCAGAATTGGTAAAGAGAGTCGTGTAAAATATCGAGTTCGCACATTTTGTTGTCTGATTATTGATTTTTGGCGAAACCATTTGATCATATGACAAGATGTGTATCTACCTTAACTTAATGATTTTGATAAAAATCATTAGGGGATTCATCAGCATTATGCCCCCAGACTCCATTTGTGGGATACACTCGTCATGTTGTTGCTTGGGTTTGTAATATAATTTTGTCATTTTTGCAGTCATCACTTTTTGATTTAGTTTCTATATCTGAGCCAACTTTTGTAGTCTAATTGTTTCTCCTCTCCTCTCCTTCTCTTATTTTATACTTTCTTTGGTTTTGTCTTGGAAATCAAAACCGTTATGAATCACATCCTGACTGTTCACTTGAGTTCTACTTAAGCTTTACTCTAAATGTTAAGGTCTTCTTTAGTTTTAGCAATTATTGTTCAACTGATTACTCAGTTTCTGGTTTGGTATTCTATTCTACTTTTCGCGCAAAAAGGTGAGACAACTCATGTGTAGCATAGCTTTTTGGGGTAGAAATCGAACAAACCTCTGGCACAACAATTTGTACTAAGAGCAGTGTCATGTTGCCTTGATGGAAATAACTGTTGTTTAGCCAGAAATGAGCAATGGATGTATTGCTTTTGGCTGCATAGTAGGAGGCTTGACTTTGGGTTGCATGTATTTTAATTAGTGTTATTTATCAAATGGATGCAGCTCTGATCTGTATATTTGTTCATTCCTCAGGAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAGGTAGCCTTTATATGGATGGCGATATGTTAATTATACGACATATATCTGTGTAGTTTAACTATTTGCAGTACCTTGCAGAGACTCGTGAGAAGATCAGACAGAGAACCAAAGAAGCTTTGCGTGATCCCAAGGTGAAGTCATGTAAGAATCAATTGTACGAAGTCTTTCATGTTGCGTTTACTTTTAAAATAGATATGAAGCATGTGCTGTTGTTAGATAAAGAAAGTTTGTTTAGTTCACAATTTTTTAAAATGTCCAACTGTTTATACTTTTGGTTTTGCTTTGAAGTTTTGACTTGCACATGAAAGACCACAATCCACTGCTCTTTTTCCTTTGTTTTCCCTCAAAGCATTCCTTCTGACAAATAGGAACTTACAATTGTAGCATGATAATGTACTGACCACTCTGATACATATATATCATTCTCTTTCTCCTAAAATATATTTTATCTTATTTCAGGTAAGACAAAAGATGTCTGAATGTCCACGCTCTC</genome_strand>
        <mrna_strand>TGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCAT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGGTTTAACTAATGACTTTCAAGAAGAGGACTATTGCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAG..............................................................................AGACTCGTGAGAAGATCAGACAGAGAACCGAAGAAGCTTTGCGTGATCCCAAGGTGAAGTCAT..............................................................................................................................................................................................................................................................................................................................GTAAGACAAAAGATGTCTGAATGTCCACGCTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E723643" ref_strand="-" ref_description="SGN-E723643 [FC21AH01]">
      <seq>aaaattttttccccttttttcccccccttttttgggggccccttaaaaaatttaaagggggccctttggggggggttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttttaaaggaaatcccaataatttttggcactgcataactcaatatgtaaaattcgtacttccaactattatgaggacaacgtgctatcaaaactccattaagacattactttgtgaagataaaccatctagcattgacaactaaacacgtatctacagctgctcatcggtaattagaattggacatatctctaccagccatgtttggattttgataggagttcccatcagatgtattaggagcgtagctctggtttggccctggacctgtttggtaaggcgtgtctccattgttctgtccaccaccattgtattggaaattacgtgcgttgtttggcattccgtagttattgggaggcactccacccatgtttggtggcatattcggctgctgcatcccacctccacggggtggccctctcatgtccggctgctgcatcccgcctgcatgaggtggtggccctccatagccttgctgctgcatgggtggccctctcatgtccggctgctgcatcccgccagcatgaggtggtggccctccatagccttgctgctgcatgggtggtcatcgtcggatccccatgggaattcggccgatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54604" stop="89399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85656" g_stop="85681" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="0.577"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85682" i_stop="86280" i_length="599">
            <donor d_prob="0.954" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86281" g_stop="86300" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="46" r_length="20" r_score="0.550"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86301" i_stop="86446" i_length="146">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.133" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="86447" g_stop="86456" g_length="10"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="56" r_length="10" r_score="0.600"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86457" i_stop="87359" i_length="903">
            <donor d_prob="0.936" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.42"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="87360" g_stop="87446" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="143" r_length="87" r_score="0.460"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="87447" i_stop="88531" i_length="1085">
            <donor d_prob="0.900" d_score="0.50"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88532" g_stop="89091" g_length="560"/>
          <reference_exon_boundary r_type="cDNA" r_start="144" r_stop="703" r_length="560" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E723643" ref_strand="-">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E723643" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="85656" e_stop="85681"/>
          <exon e_start="86281" e_stop="86300"/>
          <exon e_start="86447" e_stop="86456"/>
          <exon e_start="87360" e_stop="87446"/>
          <exon e_start="88532" e_stop="89091"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATATTTTGCTTAAAGTTCCAACTGCTAGCTCCCAGTTCTTCTTGCTTTGTATGTGCTTCTGGCTAGCCACAATCATTTTCGCTGATCAGATATCTATTTAAGCGATTTCAGCTGGTTACAGAGCTTTGTGACCTCCTCTTATTGTCTTTATTTATTTATTTTTGGATGGAGCACCTCCTCTGTCATTTCTGACCAGAATAACTAAATAGTGGTTCACTGTCTCAATCTGAATAAATCATACTAACCCATCTGTCAAACTTCAGGTTATAAAAGAAAGTTTAGTTTCCTCATTGTGAAACGTTAATTTACTAGAATGTATCAACAAAATCATTGCCACCATAAGTTATCTTCCAAAGGAAAGAGGGGTCACAAGGAACAAATCAGGCTGAAATGTTGTCCACATGATTTTGCAAAGAGGAATATCAAGATATAAGAGCTTTAAAAGCTCCCTCTAAGTCAAGAGGCAAATTTTCAGCAGACCTGCACCCTGTTTCAAACTGTGCGCACAACCAGTCATAGTTGACCAGCAAGAAGAACCTGCTCCTGCTAAGCCGCACATAAACTGCTAAGTTTGTGGCATTAGATATTTACTTTCATAATTTCATGTTCATCCTATGCATAGGTTGTGTGATGACGTCTAAAATCAATCCAAACAATAGTTCTGCTCCCTTTTTAAATTTGTTTTAAGAACTTTAATCACTGGTTTGAAATTTTAGAAGTAATTTAGTAGAGGATGCATGCTATTGTGTGGTGTCTTGACCTTCGGTGCTAACCTTTGTGATCACTAGGAAGTTGCAAGTATAGCCAAAAGTCTCTCTTTACTCTGTTATTGAAGGATAGGAATGGTTTGATATCACTCTAACTGCAGCATGAATAGTTCACCATAAATAATAACTTGCAAAATAGACCTTTTCCATATAAAACTGGAAGTTCATAATAACTCTCTTTTGCAGCAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATTAAAATGGAAAAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGCTAAGGTAGGTGGGAGCGACCAAGAAGAATTAGAATGGGACAGCTACGACAAGATCAAAAGAGAGATAGCTCTCGAACGACTTCAGTTGGCTGCAGAAAAGGCCAAGGCAAAAGAAATCACACGCATACGAGCTGAGAGAGCAGCACAGAGAAAGACGGAAAGGATGCAGAGACTTGTTCAAAGGAGAAAAGAACGAGAAGAAAAGCAAAAAGTTGAAGGAAAAACGAAGAGACCAAGAAGACGGTCAAAGCAAGAGAAAGAAGAGTTAGCTGTTGCTGAAGAATTGAAACTCAAGGCGAAATTAGTGAAGGTCAGAACTAAACAAAACCTTGCTTGAACACTGAGTAAAATATGCATGGGTTGTATTTGGCACTCTTACCTAGATGATCCCATAGATCAATTTTTATTCCTTTGGCCATTCCAAGAAAATGCTGTAGCTACTACAATGAAGTCACATATTATAGTCTCTCCAACATCAAAATTTCTACTTTTTGCTCAATTCCCTCTGGAAAAAGGAAACACAACTGCTGTACAAGTTAGCACCGAACTAGAAAATATTCCAAAATGAATTCCAGATGTGGATGCGGCTAAAAAGTTGTCATTTTGGTGCATTATTGTGTTCTATAAGTGATGCCATATCCTCTATGTTCACAGTTCTTCTGTAATTAAAATGTTGTCATCTTGGTGCCTTCTTTTTTGTGTTATTACTGATGCGATATCCTGTGTGCTGACAGATTCAGAAGAAAAAGTCCACACTTAGCCATGTTTGTAGAGAACATCGACAAGCTTGGGAGAAACTCGATGTAGCATTCATAAAGAGACCTCAAGTACAAAAAACAGTTTCTCTTGCAGATCAGATTCGTGCTGCCAAGAAGAGAACAATGGATGTGAATGAAAAAGCCTTTGGTATTACATCCTCCAACTCTCAATCTATTGAAGTATCTGCAGAGGCTAAATTCATCACAGTGGAAACAAAATGACAGAAGTATTTTCTCCAATCATTTAGCTACTTGCATTGGCATATGAGAATGTCTGGACAACTTAGCCTCCGTCTTCGTTGGGAGCTTTTTGTCCTTGGACATCACTCATATGATGGAGAAACCGCATGTTAGAATTTTCAATTTCAGGAATACCATAAGCTACCTGTAGAAAAAGAAATGGGAAAAGGAAAAAAGCAGCTTGTGATATTCAAGTTATGCAAAAAAAAAAAAAAAGGATTGTCAACCATCTGTCTGTAGTCACATTTGCTGATGAATTAGTTCAGGTTGAAACTAGCTCATTTCAGTGTTACATTCAGCAGTTTTTCGTTGTTTATCAACATGAAAAATATTGTTGCTCGATGATGCCAAAAGAGGGAAGATTGACTTGTATTTGACTTGAGAACATGCGACATGATGATCATTGATGAGGAAAAAACCTGGTTCCCTAAACTACTTACCCTGGAACAATTTCTAAGAGAATCAATTTTTTATTCCAACTTACAGGTTTGCCAGCAAATATAATGTGGTTGTTCCAGATATTGTCTGCCTAGTTAGTGATTGAAAATATAATTTTCCTGCTTCTCCACTTTCGAAAATATAATGTGTAGCATTAGTTCTGCAAACTCAAGACCATCTTGAACCAACCAACTTCTGCTCAAACATCCCATTTGCCAACCCTACCAACTACAGTGGCTGATACTTCCACTGCACAAATGTATTGTGCAATTCAAGCTAAAGCGATGCCATTGCAGGCTAAAAAATTAATCCTATTAGCAATCCAAAAAACTTGTAATATGATGATGAACACTGGAAAAAAATAAAAGGAAATCCCAATAATTTTTGGCACTGCATAACTCAATATGTAAAATTCGTACTTCCAACTATTATGAGGACAACGTGCTATCAAAACTCCATTAAGACATTACTTTGTGAAGATAAACCATCTAGCATTGACAACTAAACACGTATCTACAGCTGCTCATCGGTAATTAGAATTGGACATATCTCTACCAGCCATGTTTGGATTCTGATAGGAGTTCCCATCAGATGTATTAGGAGCGTAGCTCTGGTTTGGCCCTGGACCTGTTTGGTAAGGCGTGTCTCCATTGTTCTGTCCACCACCATTGTATTGGAAATTACGTGCGTTGTTTGGCATTCCGTAGTTATTGGGAGGCACTCCACCCATGTTTGGTGGCATATTCGGCTGCTGCATCCCACCTCCACGGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCTGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCAGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTG</genome_strand>
        <mrna_strand>AAAATTTTTTCCCCTTTTTTCCCCCC.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTTTTTGGGGGCCCCTTAA..................................................................................................................................................AAAATTTAAA.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGCCCTTTGGGGGGGGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAGGAAATCCCAATAATTTTTGGCACTGCATAACTCAATATGTAAAATTCGTACTTCCAACTATTATGAGGACAACGTGCTATCAAAACTCCATTAAGACATTACTTTGTGAAGATAAACCATCTAGCATTGACAACTAAACACGTATCTACAGCTGCTCATCGGTAATTAGAATTGGACATATCTCTACCAGCCATGTTTGGATTTTGATAGGAGTTCCCATCAGATGTATTAGGAGCGTAGCTCTGGTTTGGCCCTGGACCTGTTTGGTAAGGCGTGTCTCCATTGTTCTGTCCACCACCATTGTATTGGAAATTACGTGCGTTGTTTGGCATTCCGTAGTTATTGGGAGGCACTCCACCCATGTTTGGTGGCATATTCGGCTGCTGCATCCCACCTCCACGGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCTGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCAGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E413380" ref_strand="-" ref_description="SGN-E413380 [STM-17-F14]">
      <seq>aaaaaaaatttagtttcctcattgtgaaacgataatttactagaatgtatcaacaaaatcattcccaccttaagttatcttccaaaggaaagaggggtcacaaggaacaaatcaggctgaaatgttgtccacatgattttgcaaagaggaatatcaagatataagagctttaaaagctccctctaagtcaagaggcaaattttcagcagacctgcaccctgtttcaaactgtgcgtacaaccagtcataattgaccagcaaggaaaacctgctcctgctaagccgcatataaactgctaagtttcaatcagaccaagttacgaatacgcgcatctctcagaaagctctggggtgaacgattaaaatggaaaaggtcaagggagaaattttttcagtcatgggctgaaagcattgcaaatgctgctaaagtaggtgggagcgaccaagaagaattagaatgggacagctacgacaagatcaaaagagagatagctctcgaacgacttcagttggctgcagaaaaggccaaggcaaaagaaatcacacgcatacgagctgagagagcagcacagagaaagatggaaaggatacagagacttgctcaaaggagaaaagaacgagaagaaaagcaaaaaaagttagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="85628" stop="87242"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85928" g_stop="86227" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86228" i_stop="86280" i_length="53">
            <donor d_prob="0.873" d_score="0.94"/>
            <acceptor a_prob="0.988" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86281" g_stop="86285" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="304" r_length="4" r_score="0.800"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="86286" i_stop="86611" i_length="326">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.927" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="86612" g_stop="86950" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="643" r_length="339" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E413380" ref_strand="-">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>644</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E413380" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="85928" e_stop="86227"/>
          <exon e_start="86281" e_stop="86285"/>
          <exon e_start="86612" e_stop="86950"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAAAGTTTAGTTTCCTCATTGTGAAACGTTAATTTACTAGAATGTATCAACAAAATCATTGCCACCATAAGTTATCTTCCAAAGGAAAGAGGGGTCACAAGGAACAAATCAGGCTGAAATGTTGTCCACATGATTTTGCAAAGAGGAATATCAAGATATAAGAGCTTTAAAAGCTCCCTCTAAGTCAAGAGGCAAATTTTCAGCAGACCTGCACCCTGTTTCAAACTGTGCGCACAACCAGTCATAGTTGACCAGCAAGAAGAACCTGCTCCTGCTAAGCCGCACATAAACTGCTAAGTTTGTGGCATTAGATATTTACTTTCATAATTTCATGTTCATCCTATGCATAGGTTGTGTGATGACGTCTAAAATCAATCCAAACAATAGTTCTGCTCCCTTTTTAAATTTGTTTTAAGAACTTTAATCACTGGTTTGAAATTTTAGAAGTAATTTAGTAGAGGATGCATGCTATTGTGTGGTGTCTTGACCTTCGGTGCTAACCTTTGTGATCACTAGGAAGTTGCAAGTATAGCCAAAAGTCTCTCTTTACTCTGTTATTGAAGGATAGGAATGGTTTGATATCACTCTAACTGCAGCATGAATAGTTCACCATAAATAATAACTTGCAAAATAGACCTTTTCCATATAAAACTGGAAGTTCATAATAACTCTCTTTTGCAGCAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATTAAAATGGAAAAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGCTAAGGTAGGTGGGAGCGACCAAGAAGAATTAGAATGGGACAGCTACGACAAGATCAAAAGAGAGATAGCTCTCGAACGACTTCAGTTGGCTGCAGAAAAGGCCAAGGCAAAAGAAATCACACGCATACGAGCTGAGAGAGCAGCACAGAGAAAGACGGAAAGGATGCAGAGACTTGTTCAAAGGAGAAAAGAACGAGAAGAAAAGCAAAAAGTTGAAGG</genome_strand>
        <mrna_strand>AAAAAAAATTTAGTTTCCTCATTGTGAAACGATAATTTACTAGAATGTATCAACAAAATCATTCCCACCTTAAGTTATCTTCCAAAGGAAAGAGGGGTCACAAGGAACAAATCAGGCTGAAATGTTGTCCACATGATTTTGCAAAGAGGAATATCAAGATATAAGAGCTTTAAAAGCTCCCTCTAAGTCAAGAGGCAAATTTTCAGCAGACCTGCACCCTGTTTCAAACTGTGCGTACAACCAGTCATAATTGACCAGCAAGGAAAACCTGCTCCTGCTAAGCCGCATATAAACTGCTAA.....................................................GTT-T......................................................................................................................................................................................................................................................................................................................................CAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAGCTCTGGGGTGAACGATTAAAATGGAAAAGGTCAAGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGCTAAAGTAGGTGGGAGCGACCAAGAAGAATTAGAATGGGACAGCTACGACAAGATCAAAAGAGAGATAGCTCTCGAACGACTTCAGTTGGCTGCAGAAAAGGCCAAGGCAAAAGAAATCACACGCATACGAGCTGAGAGAGCAGCACAGAGAAAGATGGAAAGGATACAGAGACTTGCTCAAAGGAGAAAAGAACGAGAAGAAAAGCAAAAAAAGTTAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E734109" ref_strand="+" ref_description="SGN-E734109 [LB11DC03]">
      <seq>gaataggtcacgggagaaattttttcagtcatgggctgaaagcattgcaaatgctgctaaggtaggtgggagcgaccaagaagaattagaatgggacagctacgacaagatcaaaagagagatagctctcgaacgacttcagttggctgcagaaaaggccaaggcaaaagaaatcacacgcatacgagctgagagagcagcacagagaaagacggaaaggatgcagagacttgttcaaaggagaaaagaacgagaagaaaagcaaaaagttgaaggaaaaacgaagagaccaagaagacggtcaaagcaagagaaagaagagttagctgttgctgaagaattgaaactcaaggcgaaattagtgaagattcagaagaaaaagtccacacttagccatgtttgtagagaacatcgacaagcttgggagaaactcgatgtagcattcataaagagacctcaagtacaaaaaacagtttctcttgcagatcagattcgtgctgccaagaagagaacaatggatgtgaatgaaaaagcctttggtattacatcctccaactctcaatctattgaagtatctgcagaggctaaattcatcacagtggaaacaaaatgacagaagtattttctccaatcatttagctacttgcattggcatatgagaatgtctggacaacttagcctccgtcttcgttgggagctttttgtccttggacatcactcatatgatggagaaaccgcatgttagaattttcaatttcaggaataccataagctacctgtagaaaaagaaatgggaaaaggaaaaaagcagcttgtgatattcaagttatgcaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="86375" stop="88238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86675" g_stop="87041" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87042" i_stop="87465" i_length="424">
            <donor d_prob="0.960" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87466" g_stop="87938" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="840" r_length="473" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E734109" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>840</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E734109" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86675" e_stop="87041"/>
          <exon e_start="87466" e_stop="87938"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGCTAAGGTAGGTGGGAGCGACCAAGAAGAATTAGAATGGGACAGCTACGACAAGATCAAAAGAGAGATAGCTCTCGAACGACTTCAGTTGGCTGCAGAAAAGGCCAAGGCAAAAGAAATCACACGCATACGAGCTGAGAGAGCAGCACAGAGAAAGACGGAAAGGATGCAGAGACTTGTTCAAAGGAGAAAAGAACGAGAAGAAAAGCAAAAAGTTGAAGGAAAAACGAAGAGACCAAGAAGACGGTCAAAGCAAGAGAAAGAAGAGTTAGCTGTTGCTGAAGAATTGAAACTCAAGGCGAAATTAGTGAAGGTCAGAACTAAACAAAACCTTGCTTGAACACTGAGTAAAATATGCATGGGTTGTATTTGGCACTCTTACCTAGATGATCCCATAGATCAATTTTTATTCCTTTGGCCATTCCAAGAAAATGCTGTAGCTACTACAATGAAGTCACATATTATAGTCTCTCCAACATCAAAATTTCTACTTTTTGCTCAATTCCCTCTGGAAAAAGGAAACACAACTGCTGTACAAGTTAGCACCGAACTAGAAAATATTCCAAAATGAATTCCAGATGTGGATGCGGCTAAAAAGTTGTCATTTTGGTGCATTATTGTGTTCTATAAGTGATGCCATATCCTCTATGTTCACAGTTCTTCTGTAATTAAAATGTTGTCATCTTGGTGCCTTCTTTTTTGTGTTATTACTGATGCGATATCCTGTGTGCTGACAGATTCAGAAGAAAAAGTCCACACTTAGCCATGTTTGTAGAGAACATCGACAAGCTTGGGAGAAACTCGATGTAGCATTCATAAAGAGACCTCAAGTACAAAAAACAGTTTCTCTTGCAGATCAGATTCGTGCTGCCAAGAAGAGAACAATGGATGTGAATGAAAAAGCCTTTGGTATTACATCCTCCAACTCTCAATCTATTGAAGTATCTGCAGAGGCTAAATTCATCACAGTGGAAACAAAATGACAGAAGTATTTTCTCCAATCATTTAGCTACTTGCATTGGCATATGAGAATGTCTGGACAACTTAGCCTCCGTCTTCGTTGGGAGCTTTTTGTCCTTGGACATCACTCATATGATGGAGAAACCGCATGTTAGAATTTTCAATTTCAGGAATACCATAAGCTACCTGTAGAAAAAGAAATGGGAAAAGGAAAAAAGCAGCTTGTGATATTCAAGTTATGCAAAAAAAA</genome_strand>
        <mrna_strand>GAATAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGCTAAGGTAGGTGGGAGCGACCAAGAAGAATTAGAATGGGACAGCTACGACAAGATCAAAAGAGAGATAGCTCTCGAACGACTTCAGTTGGCTGCAGAAAAGGCCAAGGCAAAAGAAATCACACGCATACGAGCTGAGAGAGCAGCACAGAGAAAGACGGAAAGGATGCAGAGACTTGTTCAAAGGAGAAAAGAACGAGAAGAAAAGCAAAAAGTTGAAGGAAAAACGAAGAGACCAAGAAGACGGTCAAAGCAAGAGAAAGAAGAGTTAGCTGTTGCTGAAGAATTGAAACTCAAGGCGAAATTAGTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAGAAGAAAAAGTCCACACTTAGCCATGTTTGTAGAGAACATCGACAAGCTTGGGAGAAACTCGATGTAGCATTCATAAAGAGACCTCAAGTACAAAAAACAGTTTCTCTTGCAGATCAGATTCGTGCTGCCAAGAAGAGAACAATGGATGTGAATGAAAAAGCCTTTGGTATTACATCCTCCAACTCTCAATCTATTGAAGTATCTGCAGAGGCTAAATTCATCACAGTGGAAACAAAATGACAGAAGTATTTTCTCCAATCATTTAGCTACTTGCATTGGCATATGAGAATGTCTGGACAACTTAGCCTCCGTCTTCGTTGGGAGCTTTTTGTCCTTGGACATCACTCATATGATGGAGAAACCGCATGTTAGAATTTTCAATTTCAGGAATACCATAAGCTACCTGTAGAAAAAGAAATGGGAAAAGGAAAAAAGCAGCTTGTGATATTCAAGTTATGCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E232554" ref_strand="+" ref_description="SGN-E232554 [cLEL-5-P1]">
      <seq>tttttttttttttttttggagtaacttgaatatcacaagctggttttttccttttcccatttctttttctacaggtagcttatggtattcctgaaattgaaaattctaacatgcggtttctccatcatatgagtgatgtccaaggacaaaaagctcccaacgaagacggaggctaagttgtccagacattctcatatgccaatgcaagtagctaaatgattggagaaaatacttctgtcattttgtttccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="88245" stop="87397"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87948" g_stop="87697" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E232554" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>252</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232554" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87948" e_stop="87697"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCTTTTTTTTTTTTTTTGCATAACTTGAATATCACAAGCTGCTTTTTTCCTTTTCCCATTTCTTTTTCTACAGGTAGCTTATGGTATTCCTGAAATTGAAAATTCTAACATGCGGTTTCTCCATCATATGAGTGATGTCCAAGGACAAAAAGCTCCCAACGAAGACGGAGGCTAAGTTGTCCAGACATTCTCATATGCCAATGCAAGTAGCTAAATGATTGGAGAAAATACTTCTGTCATTTTGTTTCCAC</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTGGAGTAACTTGAATATCACAAGCTGGTTTTTTCCTTTTCCCATTTCTTTTTCTACAGGTAGCTTATGGTATTCCTGAAATTGAAAATTCTAACATGCGGTTTCTCCATCATATGAGTGATGTCCAAGGACAAAAAGCTCCCAACGAAGACGGAGGCTAAGTTGTCCAGACATTCTCATATGCCAATGCAAGTAGCTAAATGATTGGAGAAAATACTTCTGTCATTTTGTTTCCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E232334" ref_strand="+" ref_description="SGN-E232334 [cLEL-5-P1]">
      <seq>tttttttttttttttttttataacttgaatatcacaagctgcttttttccttttcccatttctttttctacaggtagcttatggtattcctgaaattgaaaattctaacatgcggtttctccatcatatgagtgatgtccaaggacaaaaagctcccaacgaagacggaggctatgttgtccagacattctcatatgccaatgcatgtagctaaatgattggagaaaatacttctgtcattttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="88245" stop="87403"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87947" g_stop="87703" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E232334" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>245</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E232334" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87947" e_stop="87703"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTTTTTTTTTTTTTTGCATAACTTGAATATCACAAGCTGCTTTTTTCCTTTTCCCATTTCTTTTTCTACAGGTAGCTTATGGTATTCCTGAAATTGAAAATTCTAACATGCGGTTTCTCCATCATATGAGTGATGTCCAAGGACAAAAAGCTCCCAACGAAGACGGAGGCTAAGTTGTCCAGACATTCTCATATGCCAATGCAAGTAGCTAAATGATTGGAGAAAATACTTCTGTCATTTTGT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTATAACTTGAATATCACAAGCTGCTTTTTTCCTTTTCCCATTTCTTTTTCTACAGGTAGCTTATGGTATTCCTGAAATTGAAAATTCTAACATGCGGTTTCTCCATCATATGAGTGATGTCCAAGGACAAAAAGCTCCCAACGAAGACGGAGGCTATGTTGTCCAGACATTCTCATATGCCAATGCATGTAGCTAAATGATTGGAGAAAATACTTCTGTCATTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E544758" ref_strand="-" ref_description="SGN-E544758 [TUS-67-E3]">
      <seq>tggagggccaccacctcatgcagtcgggatgcagcagccggacatgagagggccaccccgtggaggtgggatgcagcagcagaatatgcccccaaacatgggtggagtgcctcccaataagtatggaatgccaaacaacgcacgtaatttccaatacaatggtggtggacagaacaatggagacacgccttaccaaacaggtccagggccaaaccagagctacgctcctaatacatctgatgggaactcctatcagaatccaaacatggctggtagagatatgtccaattctaattaccgatgagcagctgtagatacgtgtttagttgtcaatgctagatggtttatcttcacaaagtaatgtcttaatggagttttgatagcacgttgtcctcataatagttggaagtacgaattttacatattgagttatgcagtgccaaaaattattgggatttccttcaaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="89294" stop="54616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88994" g_stop="88541" g_length="454"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="454" r_length="454" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88540" i_stop="88059" i_length="482">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.56"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88058" g_stop="88016" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="495" r_length="41" r_score="0.558"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E544758" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>497</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544758" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="88994" e_stop="88541"/>
          <exon e_start="88058" e_stop="88016"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGGGCCACCACCTCATGCAGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCCGAATATGCCACCAAACATGGGTGGAGTGCCTCCCAATAACTACGGAATGCCAAACAACGCACGTAATTTCCAATACAATGGTGGTGGACAGAACAATGGAGACACGCCTTACCAAACAGGTCCAGGGCCAAACCAGAGCTACGCTCCTAATACATCTGATGGGAACTCCTATCAGAATCCAAACATGGCTGGTAGAGATATGTCCAATTCTAATTACCGATGAGCAGCTGTAGATACGTGTTTAGTTGTCAATGCTAGATGGTTTATCTTCACAAAGTAATGTCTTAATGGAGTTTTGATAGCACGTTGTCCTCATAATAGTTGGAAGTACGAATTTTACATATTGAGTTATGCAGTGCCAAAAATTATTGGGATTTCCTTTTATTTTTTTCCAGTGTTCATCATCATATTACAAGTTTTTTGGATTGCTAATAGGATTAATTTTTTAGCCTGCAATGGCATCGCTTTAGCTTGAATTGCACAATACATTTGTGCAGTGGAAGTATCAGCCACTGTAGTTGGTAGGGTTGGCAAATGGGATGTTTGAGCAGAAGTTGGTTGGTTCAAGATGGTCTTGAGTTTGCAGAACTAATGCTACACATTATATTTTCGAAAGTGGAGAAGCAGGAAAATTATATTTTCAATCACTAACTAGGCAGACAATATCTGGAACAACCACATTATATTTGCTGGCAAACCTGTAAGTTGGAATAAAAAATTGATTCTCTTAGAAATTGTTCCAGGGTAAGTAGTTTAGGGAACCAGGTTTTTTCCTCATCAATGATCATCATGTCGCATGTTCTCAAGTCAAATACAAGTCAATCTTCCCTCTTTTGGCATCATCGAGCAACAATATTTTTCATGTTGATAAACAACGAAAAACTGCTGAATGTAACAC</genome_strand>
        <mrna_strand>TGGAGGGCCACCACCTCATGCAGTCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCAGAATATGCCCCCAAACATGGGTGGAGTGCCTCCCAATAAGTATGGAATGCCAAACAACGCACGTAATTTCCAATACAATGGTGGTGGACAGAACAATGGAGACACGCCTTACCAAACAGGTCCAGGGCCAAACCAGAGCTACGCTCCTAATACATCTGATGGGAACTCCTATCAGAATCCAAACATGGCTGGTAGAGATATGTCCAATTCTAATTACCGATGAGCAGCTGTAGATACGTGTTTAGTTGTCAATGCTAGATGGTTTATCTTCACAAAGTAATGTCTTAATGGAGTTTTGATAGCACGTTGTCCTCATAATAGTTGGAAGTACGAATTTTACATATTGAGTTATGCAGTGCCAAAAATTATTGGG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCCTTCAAAAAAAAAAAAAAAAAACT-C-GAGGGGGGCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E280153" ref_strand="+" ref_description="SGN-E280153 [cLEL-7-E2]">
      <seq>gcacgaggagtttttttttttttttttttaaaaggaaatcccaataaggtttggcactgcataactcaatacgcaaaattcgtacttccaactattatgaggacaacgtgctatcaaaactccattaagacattactttgtgaagataaaccatctagcattgacaactaaacacgtatctacagctgctcatcggtaattagaattggacatatctctaccagccatgtttggattctgataggagttcccatcagatgtattaggagcgtagctctggtttggccctggacctgtttggtaaggcgtgtctccattgttctgtccaccaccattgtattggaaattacgtgcgttgtttggcattccgtagttattgggaggcactccacccatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54613" stop="89199"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88501" g_stop="88899" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E280153" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>399</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280153" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88501" e_stop="88899"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAATATGATGATGAACACTGGAAAAAAATAAAAGGAAATCCCAATAATTTTTGGCACTGCATAACTCAATATGTAAAATTCGTACTTCCAACTATTATGAGGACAACGTGCTATCAAAACTCCATTAAGACATTACTTTGTGAAGATAAACCATCTAGCATTGACAACTAAACACGTATCTACAGCTGCTCATCGGTAATTAGAATTGGACATATCTCTACCAGCCATGTTTGGATTCTGATAGGAGTTCCCATCAGATGTATTAGGAGCGTAGCTCTGGTTTGGCCCTGGACCTGTTTGGTAAGGCGTGTCTCCATTGTTCTGTCCACCACCATTGTATTGGAAATTACGTGCGTTGTTTGGCATTCCGTAGTTATTGGGAGGCACTCCACCCATGT</genome_strand>
        <mrna_strand>GCACGAGGA-GTTTTTTTTTTTTTTTTTTTAAAAGGAAATCCCAATAAGGTTTGGCACTGCATAACTCAATACGCAAAATTCGTACTTCCAACTATTATGAGGACAACGTGCTATCAAAACTCCATTAAGACATTACTTTGTGAAGATAAACCATCTAGCATTGACAACTAAACACGTATCTACAGCTGCTCATCGGTAATTAGAATTGGACATATCTCTACCAGCCATGTTTGGATTCTGATAGGAGTTCCCATCAGATGTATTAGGAGCGTAGCTCTGGTTTGGCCCTGGACCTGTTTGGTAAGGCGTGTCTCCATTGTTCTGTCCACCACCATTGTATTGGAAATTACGTGCGTTGTTTGGCATTCCGTAGTTATTGGGAGGCACTCCACCCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E549096" ref_strand="+" ref_description="SGN-E549096 [TUS-67-E7]">
      <seq>ttcctaaaaaggaggaaatcccaataatttttggcactgcataactcaatatggaaaattcgtacttccaactattatgaggacaacgtgctatcaaaactccattaagacattactttgtgaagataaaccatctagcattgacaactaaacacgtatctacagctgctcatcggtaattagaattggacatatctctaccagccatgtttggattctgataggagttcccatcagatgtattaggagcgtagctctggtttggccctgaacctgtttggtaaggcgtgtctccattgttctgtccaccaccattgtattgaaaattacgtgcgttgtttggcattccatacttattgggaggcactccacccatgtttgggggcatattcggctgctgcatcccacctccacggggtggccctctcatgtccggctgctgcatcccgactgcatgaggcggtggccctccatagccttgctgctgcatgggtggccctctcatgtccggctgctgcatcccgccaacatgaagtggtgaccctccatagccttgctgctgcatgggtggccctctcatgtccggctgctgcataccgcccgcaagaggtgggggccctccataaccttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="88226" stop="89454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88522" g_stop="89154" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E549096" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E549096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88522" e_stop="89154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAAATAAAAGGAAATCCCAATAATTTTTGGCACTGCATAACTCAATATGTAAAATTCGTACTTCCAACTATTATGAGGACAACGTGCTATCAAAACTCCATTAAGACATTACTTTGTGAAGATAAACCATCTAGCATTGACAACTAAACACGTATCTACAGCTGCTCATCGGTAATTAGAATTGGACATATCTCTACCAGCCATGTTTGGATTCTGATAGGAGTTCCCATCAGATGTATTAGGAGCGTAGCTCTGGTTTGGCCCTGGACCTGTTTGGTAAGGCGTGTCTCCATTGTTCTGTCCACCACCATTGTATTGGAAATTACGTGCGTTGTTTGGCATTCCGTAGTTATTGGGAGGCACTCCACCCATGTTTGGTGGCATATTCGGCTGCTGCATCCCACCTCCACGGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCTGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCAGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTGGTCCTCTCATGTCCGGCTGCTGCATACCGCCTGCATGAGGTGGTGGCCCTCCATAGCCTTGCT</genome_strand>
        <mrna_strand>TTCCTAAAAAGGAGGAAATCCCAATAATTTTTGGCACTGCATAACTCAATATGGAAAATTCGTACTTCCAACTATTATGAGGACAACGTGCTATCAAAACTCCATTAAGACATTACTTTGTGAAGATAAACCATCTAGCATTGACAACTAAACACGTATCTACAGCTGCTCATCGGTAATTAGAATTGGACATATCTCTACCAGCCATGTTTGGATTCTGATAGGAGTTCCCATCAGATGTATTAGGAGCGTAGCTCTGGTTTGGCCCTGAACCTGTTTGGTAAGGCGTGTCTCCATTGTTCTGTCCACCACCATTGTATTGAAAATTACGTGCGTTGTTTGGCATTCCATACTTATTGGGAGGCACTCCACCCATGTTTGGGGGCATATTCGGCTGCTGCATCCCACCTCCACGGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGACTGCATGAGGCGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCAACATGAAGTGGTGACCCTCCATAGCCTTGCTGCTGCATGGGTGGCCCTCTCATGTCCGGCTGCTGCATACCGCCCGCAAGAGGTGGGGGCCCTCCATAACCTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E540328" ref_strand="+" ref_description="SGN-E540328 [TUS-60-I18]">
      <seq>ggcgcaatgaccgacctcgtaattttgataggtccagaaactttgagagaagaagagagatgcagaatcaacccagtcagaaccctggatctaacatggcagcaggggggcctcccaacatgggcggcatgcagcaacctaacatgggtggaatgcaccagcagcaaggcatgggagggccaccacctcatgcaggcgggatgcaccagcagcaaggctatggagggccaccacctcatgcaggcggtatgcagcagccggacatgagaggaccacccatgcagcagcaaggctatggagggccaccacctcatgctggcgggatgcagcagccggacatgagagggccacccatgcagcagcaaggctatggagggccaccacctcatgcaggcgggatgcagcagccggacatgagagggccaccccgtggaggtgggatgcagcagccgaatatgccaccaaacatgggtggagtgcctcccaataactacggaatgccaaacaacgcacgtaatttccaatacaatggtggtggacagaacaatggagacacgccttaccaaacaggtccagggccaaaccagagctacgctcctaatacatctgatgggaactcctatcagaatccaaacatggctggtagagatatgtccaattctaattaccgatgagcagcctgtagatacgtgtttagttggcaatgctagatggtttatcttcacaaaggtatggctttaatggagttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="89664" stop="88316"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89364" g_stop="88616" g_length="749"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="751" r_length="751" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E540328" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>749</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89364" e_stop="88616"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCAGGCGGGATGCACCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGTATGCAGCAGCCGGACATGAGAGGACCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCTGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCCGAATATGCCACCAAACATGGGTGGAGTGCCTCCCAATAACTACGGAATGCCAAACAACGCACGTAATTTCCAATACAATGGTGGTGGACAGAACAATGGAGACACGCCTTACCAAACAGGTCCAGGGCCAAACCAGAGCTACGCTCCTAATACATCTGATGGGAACTCCTATCAGAATCCAAACATGGCTGGTAGAGATATGTCCAATTCTAATTACCGATGAGCAG-CTGTAGATACGTGTTTAGTTGTCAATGCTAGATGGTTTATCTTCACAAAGTAATGTC-TTAATGGAGTTTTG</genome_strand>
        <mrna_strand>GGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCAGGCGGGATGCACCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGTATGCAGCAGCCGGACATGAGAGGACCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCTGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCCGAATATGCCACCAAACATGGGTGGAGTGCCTCCCAATAACTACGGAATGCCAAACAACGCACGTAATTTCCAATACAATGGTGGTGGACAGAACAATGGAGACACGCCTTACCAAACAGGTCCAGGGCCAAACCAGAGCTACGCTCCTAATACATCTGATGGGAACTCCTATCAGAATCCAAACATGGCTGGTAGAGATATGTCCAATTCTAATTACCGATGAGCAGCCTGTAGATACGTGTTTAGTTGGCAATGCTAGATGGTTTATCTTCACAAAGGTATGGCTTTAATGGAGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E704331" ref_strand="+" ref_description="SGN-E704331 [FA24AA04]">
      <seq>atttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactaaaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaagattatggaggggaaccttttatcaatggacaggctgtaccatatgacccgaaataccatgaggaatgggtgagaaacaatgctcgtgctaatgagagaaacaggcgcaatgaccgacctcgtaattttgataggtccataaactttgagagaaaaagagagatgcagaatcaacccagtcagaaccctggatctaacatggcagcaggggggcctcccaacatgggcggcatgcagcaacctaacatgggtggaatgcaccagcatcaaggcatgggagggccaccacctcatgcaggcgggatgcaccagcagcaaggctatggagggccaccacctcatgcaggcggtatgcaacagccggacatgagaggaccacccatgcagcagcaaggctatggagggccaccacctcatgctggcgggatgcagcagccggacatgagagggccacccatgcagcagcaaggctatggagggccaccacctcatgcaggcgggatgcagcagccggacatgagagggccaccccgtggaggtgggatgcagcagccgaatatgccaccaaacatgggtggagtgcctcccaataactacggaatgccatacaacgcacgtaatttccaatacgatggtggtggacagaacaatggagacacgccttaccaaacatgtccagggccaaaccagagctacgctcctaatacatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="90163" stop="88456"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89863" g_stop="89788" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89681" g_stop="89616" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="142" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158">
            <donor d_prob="0.892" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89457" g_stop="88756" g_length="702"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="844" r_length="702" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E704331" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>844</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704331" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89863" e_stop="89788"/>
          <exon e_start="89681" e_stop="89616"/>
          <exon e_start="89457" e_stop="88756"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCTTATAACTTTTTGTAATGCATGTTGCAGGGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCAGGCGGGATGCACCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGTATGCAGCAGCCGGACATGAGAGGACCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCTGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCCGAATATGCCACCAAACATGGGTGGAGTGCCTCCCAATAACTACGGAATGCCAAACAACGCACGTAATTTCCAATACAATGGTGGTGGACAGAACAATGGAGACACGCCTTACCAAACAGGTCCAGGGCCAAACCAGAGCTACGCTCCTAATACATCTG</genome_strand>
        <mrna_strand>ATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAG..............................................................................................................................................................GGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTTGATAGGTCCATAAACTTTGAGAGAAAAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCATCAAGGCATGGGAGGGCCACCACCTCATGCAGGCGGGATGCACCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGTATGCAACAGCCGGACATGAGAGGACCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCTGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCCGAATATGCCACCAAACATGGGTGGAGTGCCTCCCAATAACTACGGAATGCCATACAACGCACGTAATTTCCAATACGATGGTGGTGGACAGAACAATGGAGACACGCCTTACCAAACATGTCCAGGGCCAAACCAGAGCTACGCTCCTAATACATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E286906" ref_strand="+" ref_description="SGN-E286906 [cLES-14-P2]">
      <seq>gcgcaatgaccgacctcgtaattttgataggtccagaaactttgagagaagaagagagatgcagaatcaacccagtcagaaccctggatctaacatggcagcaggggggcctcccaacatgggcggcatgcagcaacctaacatgggtggaatgcaccagcagcaaggcatgggagggccaccacctcatgcaggcgggatgcaccagcagcaaggctatggagggccaccacctcatgcaggcggtatgcagcagccggacatgagaggaccacccatgcagcagcaaggctatggagggccaccacctcatgctggcgggatgcagcagccggacatgagagggccacccatgcagcagcaaggctatggagggccaccacctcatgcaggcgggatgcagcagccggacatgagagggccaccccgtggaggtgggatgcagcagccgaatatgccaccaaacatgggtggagtgcctcccaataactacggaatgccaaacaacgcacgtaatttccaatacaatggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="89663" stop="88532"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89363" g_stop="88832" g_length="532"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="532" r_length="532" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E286906" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E286906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89363" e_stop="88832"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCAGGCGGGATGCACCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGTATGCAGCAGCCGGACATGAGAGGACCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCTGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCCGAATATGCCACCAAACATGGGTGGAGTGCCTCCCAATAACTACGGAATGCCAAACAACGCACGTAATTTCCAATACAATGGT</genome_strand>
        <mrna_strand>GCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCAGGCGGGATGCACCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGTATGCAGCAGCCGGACATGAGAGGACCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCTGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCCGAATATGCCACCAAACATGGGTGGAGTGCCTCCCAATAACTACGGAATGCCAAACAACGCACGTAATTTCCAATACAATGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E567592" ref_strand="+" ref_description="SGN-E567592 [11741]">
      <seq>gaagcctgaaggtgatcccaccagagatgaaattattgatagctacatcaaaacacttgctacggattgttgggagtgaggaggatgcacgggatgaagatttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactaaaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaagattatggaggggaaccttttatcaatggacaggctgtaccatatgacccgaaataccacgaggaatgggtgagaaacaatgctcgtgctaatgagagaaacagacgcaatgaccgacctcgtaattttgatagatccagaaactttgagagaagaagagagatgcagaatcaacccagtcagaaccctgggatccaacatggcagcaggggggcctcccaacatgggcggcatgcagcagcagcaaggcatgggagggccatcccatacaggcgggatgcaccaggcagcaaggctatggagggccaccacctcatgcagtgggatgcagcagccgggacatgagaggaccacccatgccagcagcaaggctatggagggccaccacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="90734" stop="88754"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90434" g_stop="90360" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.947"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="0.94"/>
            <acceptor a_prob="0.961" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89788" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="175" r_length="99" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89681" g_stop="89616" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="241" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158">
            <donor d_prob="0.892" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89457" g_stop="89054" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="621" r_length="380" r_score="0.891"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E567592" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="1.035" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E567592" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90434" e_stop="90360"/>
          <exon e_start="89885" e_stop="89788"/>
          <exon e_start="89681" e_stop="89616"/>
          <exon e_start="89457" e_stop="89054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTAC-GATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCAC-GGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCTTATAACTTTTTGTAATGCATGTTGCAGGGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCT-GGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCAGGCGGGATGCACCA-GCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGTATGCAGCAGCC-GGACATGAGAGGACCACCCATG-CAGCAGCAAGGCTATGGAGGGCCACCACCT</genome_strand>
        <mrna_strand>GAAGCCTGAAGGTGATCCCACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGGATTGTTGGGAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGATGCACGGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAG..............................................................................................................................................................GGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCACGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGACGCAATGACCGACCTCGTAATTTTGATAGATCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGGATCCAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCAT---G--------C---------A-G---CAGCAGCAAGGCATGGGAGGGCCA--TCC-CATACAGGCGGGATGCACCAGGCAGCAAGGCTATGGAGGGCCACCACCTCATGCA-GTGGGATGCAGCAGCCGGGACATGAGAGGACCACCCATGCCAGCAGCAAGGCTATGGAGGGCCACCACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E705830" ref_strand="+" ref_description="SGN-E705830 [FA28BA09]">
      <seq>ccgtttcgctctttgctcaatgcattcaaacgctcctgcaactcattttctctctctacaactccgagcacttactcactccaccttctccgaccacttcatgccgttgcggccaacctacgaaatgtctctccggcaccgacgccgttttctcgaggttttgccactcgtcaaacgtcgtcgtcactgaatgatccaaatcctaactggtccaatcgacctccgaaggaaacgattttgcttgacggctgtgattttgagcactggcttgttgtgatggagaagcctgaaggtgatcctaccagagatgaaattattgatagctacatcaaaacacttgctacgattgttggaagtgaggaggaagcacggatgaagatttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactaaaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaagattatggaggggaaccttttatcaatggacaggctgtaccatatgacccgaaataccatgaggaatgggtgagaaacaatgctcgtgctaatgagagaaacaggcgcaatgaccgacctcgtaattttgataggtccagaaactttgagagaagaagagagatgcagaatcaacccagtcagaaccctggatctaacatggcagcaggggggcctcccaacatgggcggcatgcagcaacctaacatgggtggaatgcaccagcagcaaggcatgggagggccaccacctcatgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="91014" stop="88871"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90715" g_stop="90360" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="356" r_length="356" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89788" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="454" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89681" g_stop="89616" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="520" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158">
            <donor d_prob="0.892" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89457" g_stop="89171" g_length="287"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="807" r_length="287" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E705830" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E705830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90715" e_stop="90360"/>
          <exon e_start="89885" e_stop="89788"/>
          <exon e_start="89681" e_stop="89616"/>
          <exon e_start="89457" e_stop="89171"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCTTATAACTTTTTGTAATGCATGTTGCAGGGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCA</genome_strand>
        <mrna_strand>CCGTTTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAG..............................................................................................................................................................GGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E729839" ref_strand="+" ref_description="SGN-E729839 [LA22BB02]">
      <seq>gttgaaacgaaaatggcgtctcgctctttgctcaatgcattcaaacgctcctgcaactcattttctctctctacaactccgagcacttactcactccaccttctccgaccacttcatgccgttgcggccaacctacgaaatgtctctccggcaccgacgccgttttctcgaggttttgccactcgtcaaacgtcgtcgtcactgaatgatccaaatcctaactggtccaatcgacctccgaaggaaacgattttgcttgacggctgtgattttgagcactggcttgttgtgatggagaagcctgaaggtgatcctaccagagatgaaattattgatagctacatcaaaacacttgctacgattgttggaagtgaggaggaagcacggatgaagatttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactaaaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaagattatggaggggaaccttttatcaatggacaggctgtaccatatgacccgaaataccatgaggaatgggtgagaaacaatgctcgtgctaatgagagaaacaggcgcaatgaccgacctcgtaattttgataggtccagaaactttgagagaagaagagagatgcagaatcaacccagtcagaaccctgggatctaacatggcagcaggggggccctcccaacatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="91030" stop="88942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90730" g_stop="90360" g_length="371"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="371" r_length="371" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89788" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="469" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89681" g_stop="89616" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="535" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158">
            <donor d_prob="0.892" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89457" g_stop="89242" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="536" r_stop="753" r_length="218" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E729839" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>751</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E729839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90730" e_stop="90360"/>
          <exon e_start="89885" e_stop="89788"/>
          <exon e_start="89681" e_stop="89616"/>
          <exon e_start="89457" e_stop="89242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTGAAACGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCTTATAACTTTTTGTAATGCATGTTGCAGGGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCT-GGATCTAACATGGCAGCAGGGGGG-CCTCCCAACATGG</genome_strand>
        <mrna_strand>GTTGAAACGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAG..............................................................................................................................................................GGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGGATCTAACATGGCAGCAGGGGGGCCCTCCCAACATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E451180" ref_strand="+" ref_description="SGN-E451180 [cSTS-12-A11]">
      <seq>gctaactagggttttgtagaaacgaaaatggcgtctcgttctttactcaatgcattcaaacgctcctgcaactcactttctctctctacaactccgagcacgtcctctctccaccgtctgcggtcactttctgccgttgcggccaacctacgaaatgtgtctccggcaccgacgacgttttctcgaggttttgccactcgccaaacgtcgtcgtcactcaatgatccgaatcctaactggtccaatcgacctccaaaggaaacgattttgcttgacggctgtgattttgagcactggcttgttgtgatggagaagcctgaaggtgatcccaccagagatgaaattattgatagctacatcaaaacacttgctacgattgttggaagtgaggaggatgcacggatgaagatttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactaaaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaagattatggaggggaaccttttatcaatggacaggctgtaccatatgacccgaaaaccacgaggaatgggtgagaaacaatgctcgtgctaatgagagaaacagacgcaatgaccgacctcgtaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="91045" stop="89039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90745" g_stop="90360" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89788" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="484" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89681" g_stop="89616" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="550" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158">
            <donor d_prob="0.892" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89457" g_stop="89339" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="551" r_stop="668" r_length="118" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E451180" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E451180" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90745" e_stop="90360"/>
          <exon e_start="89885" e_stop="89788"/>
          <exon e_start="89681" e_stop="89616"/>
          <exon e_start="89457" e_stop="89339"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAGCTAGGGTTTTGTTGAAACGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCTTATAACTTTTTGTAATGCATGTTGCAGGGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTT</genome_strand>
        <mrna_strand>GCTAACTAGGGTTTTGTAGAAACGAAAATGGCGTCTCGTTCTTTACTCAATGCATTCAAACGCTCCTGCAACTCACTTTCTCTCTCTACAACTCCGAGCACGTCCTCTCTCCACCGTCTGCGGTCACTTTCTGCCGTTGCGGCCAACCTACGAAATGTGTCTCCGGCACCGACGACGTTTTCTCGAGGTTTTGCCACTCGCCAAACGTCGTCGTCACTCAATGATCCGAATCCTAACTGGTCCAATCGACCTCCAAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCCACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGATGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAG..............................................................................................................................................................GGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAA-ACCACGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGACGCAATGACCGACCTCGTAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E328021" ref_strand="+" ref_description="SGN-E328021 [cTOC-22-M15]">
      <seq>tctcgctctttgctcaatgcattcaaacgctcctgcaactcattttctctctctacaactccgagcacttactcactccaccttctccgaccacttcatgccgttgcggccaacctacgaaatgtctctccggcaccgacgccgttttctcgaggttttgccactcgtcaaacgtcgtcgtcactgaatgatccaaatcctaactggtccaatcgacctccgaaggaaacgattttgcttgacggctgtgattttgagcactggcttgttgtgatggagaagcctgaaggtgatcctaccagagatgaaattattgatagctacatcaaaacacttgctacgattgttggaagtgaggaggaagcacggatgaagatttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactaaaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaagattatggaggggaaccttttatcaatggacaggctgtaccatatgacccgaaataccatgaggaatgggtgagaaacaatgctcgtgctaatgagagaaacaggcgcaatgaccgacctcgtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="91012" stop="89043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90712" g_stop="90360" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89788" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="451" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89681" g_stop="89616" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="517" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158">
            <donor d_prob="0.892" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89457" g_stop="89343" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="632" r_length="115" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E328021" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>632</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E328021" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90712" e_stop="90360"/>
          <exon e_start="89885" e_stop="89788"/>
          <exon e_start="89681" e_stop="89616"/>
          <exon e_start="89457" e_stop="89343"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCTTATAACTTTTTGTAATGCATGTTGCAGGGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAA</genome_strand>
        <mrna_strand>TCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAG..............................................................................................................................................................GGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E327982" ref_strand="+" ref_description="SGN-E327982 [cTOC-22-N4]">
      <seq>tctcgctctttgctcaatgcattcaaacgctcctgcaactcattttctctctctacaactccgagcacttactcactccaccttctccgaccacttcatgccgttgcggccaacctacgaaatgtctctccggcaccgacgccgttttctcgaggttttgccactcgtcaaacgtcgtcgtcactgaatgatccaaatcctaactggtccaatcgacctccgaaggaaacgattttgcttgacggctgtgattttgagcactggcttgttgtgatggagaagcctgaaggtgatcctaccagagatgaaattattgatagctacatcaaaacacttgctacgattgttggaagtgaggaggaagcacggatgaagatttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactanaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaagattatggaggggaaccttttatcaatggacaggctgtaccatatgacccgaaataccatgaggaatgggtgagaaacaatgctcgtgctaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="91012" stop="89074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90712" g_stop="90360" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="353" r_length="353" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89788" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="354" r_stop="451" r_length="98" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="0.98"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89681" g_stop="89616" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="517" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158">
            <donor d_prob="0.892" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89457" g_stop="89374" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="518" r_stop="601" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E327982" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E327982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90712" e_stop="90360"/>
          <exon e_start="89885" e_stop="89788"/>
          <exon e_start="89681" e_stop="89616"/>
          <exon e_start="89457" e_stop="89374"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCTTATAACTTTTTGTAATGCATGTTGCAGGGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATG</genome_strand>
        <mrna_strand>TCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTANAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAG..............................................................................................................................................................GGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E209549" ref_strand="+" ref_description="SGN-E209549 [cLEC-54-D10]">
      <seq>cgaaaatggcgtctcgctctttgctcaatgcattcaaacgctcctgcaactcattttctctctctacaactccgagcacttactcactccaccttctccgaccacttcatgccgttgcggccaacctacgaaatgtctctccggcaccgacgccgttttctcgaggttttgccactcgtcaaacgtcgtcgtcactgaatgatccaaatcctaactggtccaatcgacctccgaaggaaacgattttgcttgacggctgtgattttgagcactggcttgttgtgatggaaaancctgaaggngatcctaccananatgaaattattgatagctacatcaaaacacttgctacgattgttggaagtgaggaggaagcacggatgaagatttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactaaaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaaggatatggaggggaacctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="91023" stop="89306"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90723" g_stop="90360" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="0.98"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89788" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="462" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89681" g_stop="89616" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="463" r_stop="528" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158">
            <donor d_prob="0.892" d_score="0.96"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89457" g_stop="89447" g_length="11"/>
          <reference_exon_boundary r_type="cDNA" r_start="529" r_stop="539" r_length="11" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E209549" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90723" e_stop="90360"/>
          <exon e_start="89885" e_stop="89788"/>
          <exon e_start="89681" e_stop="89616"/>
          <exon e_start="89457" e_stop="89447"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCTTATAACTTTTTGTAATGCATGTTGCAGGGGAACCTTTT</genome_strand>
        <mrna_strand>CGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAAAANCCTGAAGGNGATCCTACCANANATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGGATATGGAG..............................................................................................................................................................GGGAACCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E544765" ref_strand="+" ref_description="SGN-E544765 [TUS-67-E7]">
      <seq>aaacgctcctgcaactcattttctctctctacaactccgagcacttactcactccaccttctccgaccacttcatgccgttgcggccaacctacgaaatgtctctccggcaccgacgccgttttctcgaggttttgccactcgtcaaacgtcgtcgtcactgaatgatccaaatcctaactggtccaatcgacctccgaaggaaacgattttgcttgacggctgtgattttgagcactggcttgttgtgatggagaagcctgaaggtgatcctaccagagatgaaattattgatagctacatcaaaacacttgctacgattgttggaagtgaggaggaagcacggatgaagatttattccgtctcaactagacattactttgcttttggtgcccttgtatctgaagagctttcttataaactaaaagagctgcctaaggttcgttgggtgcttcctgattcttatctcgatgttagaaataaagattatggaggtaagcgattccatgatttgtagtcctatcaggttgctgtgtcagcactagttaagcatttttggacagtttatcttggattataaacttgtcatgtgtgtcaagttaatatgtggtgcatcagctaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="90988" stop="89185"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90688" g_stop="90360" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89788" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="427" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.929" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89681" g_stop="89485" g_length="197"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="624" r_length="197" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E544765" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90688" e_stop="90360"/>
          <exon e_start="89885" e_stop="89788"/>
          <exon e_start="89681" e_stop="89485"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAGGTAATGCAGTTGTTACACCCCAACCTTTTTTTTTCCTTTGGTCATTCATGATGGTGAGTAAATTGGTGGTAAGCCTAATCACTTGTTTGTTTTCATTCATGTCCAGAGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCT</genome_strand>
        <mrna_strand>AAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG..........................................................................................................AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGATTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E306476" ref_strand="+" ref_description="SGN-E306476 [cLEX-13-M21]">
      <seq>cgaaaatggcgtctcgctctttgctcaatgcattcaaacgctcctgcaactcattttctctctctacaactccgagcacttactcactccaccttctccgaccacttcatgccgttgcggccaacctacgaaatgtctctccggcaccgacgccgttttctcgaggttttgccactcgtcaaacgtcgtcgtcactgaatgatccaaatcctaactggtccaatcgacctccgaaggaaacgattttgcttgacggctgtgattttgagcactggcttgttgtgatggagaagcctgaaggtgatcctaccagagatgaaattattgatagctacatcaaaacacttgctacgattgttggaagtgaggaggaagcacggatgaagatttattccgtctcaactagacattactttgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="91023" stop="89529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90723" g_stop="90360" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474">
            <donor d_prob="0.875" d_score="1.00"/>
            <acceptor a_prob="0.961" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="89885" g_stop="89829" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="421" r_length="57" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E306476" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90723" e_stop="90360"/>
          <exon e_start="89885" e_stop="89829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAGGTTTGGCTCATTTCTCTGCATTTTTAGCTTCTTCTCGTGTTTCAGCTCCATTTTATTAAAACCTAATTATAATTGCATACTGTTTTATTACTTTTGGTGATATGATGTTTAGTTTTAGCTCTTGATAAATGATTTGGGGAAGAAATGATTAAAACATGTGAATAAAATATGTTTTTTTATCTTGATATGCTAAAAGTGATGAGTGAAAATGTATTTTCAGTATAATGGATGAGTAAACGTGAACAGAGGGAGTGTTAGTTTGTTCAAGGAAAAACAAACTTCCCTGTGTGGTGTGCCTATACTTGTATATGGAAATGTATGCCTTTTGTTAACCAATATATACTTGTTTTGCCGTAAAAACGAAGTTGTTAGCTTGTGTGGATGAGGAGAACAAAGACTGTACGAGTGATTATACCTGAAAGAAGGATTAGCTTATCTTTATGGATGGCTTATGTTAATAGTTAATTTTTTCAGTGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTT</genome_strand>
        <mrna_strand>CGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E547730" ref_strand="+" ref_description="SGN-E547730 [TUS-71-M5]">
      <seq>agaaaaaccaaaaaaataaaaaataaaaaaataaaaaaaatggcaaaggctattttggtcctttctgcactctgcagcatattggcctttgccaactttgctcaatgccaagaagccttcaaagttgaaggcactgtctattgtgacacttgccgtgtgcaatttcagaccagaatcagtgaatacattgaaggagcaaaagtgaagttgacatgcagagacatggagacagaaaaggtgacatatacagcagaagcattgacagacaagaatggaaaatacacaatagaagcatcaggtgaccatgagaaagaactttgtgatgtaggtgttgtccaaagcccaagagaggattgcaaggaccctgcaattggttttgagaactcaagagttgtgtgcagtaacaatgttggtatgcataatccaactcgctacgcgaatccactattcttcatgaagaaagagactctgcctgattgcaaggatgttcttgatgagcttggtttattcccacttgagttttaaattacaaagttttttagaccaaagcacacattactattagcttttgccctttttgttgaatcaaattctcctgtatgtgtaactcaccatgcatgaaacacaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="93805" stop="91649"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93505" g_stop="93313" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93312" i_stop="92386" i_length="927">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.797" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="92385" g_stop="91949" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="630" r_length="437" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E547730" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>630</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E547730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93505" e_stop="93313"/>
          <exon e_start="92385" e_stop="91949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAAACCAAAAAAATAAAAAATAAAAAATAAAAAAAAATGGCAAAGGCTATTTTGGTCCTTTCTGCACTCTGCAGCATATTGGCCTTTGCCAACTTTGCTCAATGCCAAGAAGCCTTCAAAGTTGAAGGCACTGTCTATTGTGACACTTGCCGTGTGCAATTTCAGACCAGAATCAGTGAATACATTGAAGGTATGAATAATATTTACGATCAGATCTCTTTATAACGTTATTATTTATCTAAATAGTGTTTTTTAACTGTTATAGCGAGATATAGTAACGTAATATGATTTGATTAACGTTATAATGATATGTTGTTATGGAGGATCGTTGCTATAGAAAGATCCGTAAGAAAATTGACATACATGTTTGGTAAGATGTATTTTATGTTTATTCAATATTATAGGGCGTACAATTCATACATAGCAAACACATGGTATTAGTAATACAAGAGATATTAATGCATGGATAAGCATGATTTAAAACATAAATGTTCTTAAGGCCGTAACATTTAGCAACCAAAAACTATTTAATCTAACAAGTGCTCTCCGAACTAAGCTACATAGTCTCCGGTCACCAGGCTCACCAACCAATCTGAATTTTTTTTTAAATTTCTACCGAATATATCAAAACAAACCATAATAACTGATGATTTCAACCAATGAGTTTCCCTATATATGACATAGCGCTTGGGTAGGGTGGGCTATTTCGATCCATCAAATCTTTGAGCAGGGGCCTAGTATCGTATTTGATGATTGGCGTTGCGATACGTTATGTTTCAATGACTGCCTTCTCAATCGTTGAAAGACTGAGCGAGAACGGTAAGGGCACACAAACAAAGAAATAATCTCAACATATAACTGATCATAATATTACTAGTCCCAAATTACTAATATAACATTACTATTCAGTATTATTTTTATACAATCTGTCAAACAATTTGTAATATATAAAAAAATACTATGGAATATAGATGTAAAGTAAAATGGGAAGGCACCTAGATGGAAACAAGAGAAGTAGTATGGGTGATCACACCATGACACTTACTATGCTTCACAAAACTGACGAATATTGTTATAGAGAAGTCTGATTGGTTGATTAACGAGATACATTGTATAGGAGCAAAAGTGAAGTTGACATGCAGAGACATGGAGACAGAAAAGGTGACATATACAGCAGAAGCATTGACAGACAAGAATGGAAAATACACAATAGAAGCATCAGGTGACCATGAGAAAGAACTTTGTGATGTAGGTGTTGTGCAAAGCCCAAGAGAGGATTGCAAGGACCCTGCAATTGGATTTGAGAACTCAAGAGTTGTGTGCAGTAACAATGTTGGTATGCATAATCCAACTCGCTACGCGAATCCACTATTCTTCATGAAGAAAGAGACTTTGCCTGATTGCAAGGATGTTCTTGATGAGCTTGGTTTATTCCCACTTGAGTTTTAAATTACAAAGTTTTTTAGACCAAAACACACATTACTATTAGCTTTTGCCCTTTTTGTTGAATCGAATTCTCCTGTATGTGTAACTCACCATGCATGAACAACAAAG</genome_strand>
        <mrna_strand>AGAAAAACCAAAAAAATAAAAAATAAAAAAATAAAAAAAATGGCAAAGGCTATTTTGGTCCTTTCTGCACTCTGCAGCATATTGGCCTTTGCCAACTTTGCTCAATGCCAAGAAGCCTTCAAAGTTGAAGGCACTGTCTATTGTGACACTTGCCGTGTGCAATTTCAGACCAGAATCAGTGAATACATTGAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGCAAAAGTGAAGTTGACATGCAGAGACATGGAGACAGAAAAGGTGACATATACAGCAGAAGCATTGACAGACAAGAATGGAAAATACACAATAGAAGCATCAGGTGACCATGAGAAAGAACTTTGTGATGTAGGTGTTGTCCAAAGCCCAAGAGAGGATTGCAAGGACCCTGCAATTGGTTTTGAGAACTCAAGAGTTGTGTGCAGTAACAATGTTGGTATGCATAATCCAACTCGCTACGCGAATCCACTATTCTTCATGAAGAAAGAGACTCTGCCTGATTGCAAGGATGTTCTTGATGAGCTTGGTTTATTCCCACTTGAGTTTTAAATTACAAAGTTTTTTAGACCAAAGCACACATTACTATTAGCTTTTGCCCTTTTTGTTGAATCAAATTCTCCTGTATGTGTAACTCACCATGCATGAAACACAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E220266" ref_strand="-" ref_description="SGN-E220266 [cLEL-12-D14]">
      <seq>atttccaaggaatacatggaagcaaaaccagctcaagaacttgtgaacctgaacccgactagcgaatatgcacctggcttggaggacacactcatcttgaccatgaaaggtattgctgctggaatgcagaatactggttaagctaatcctatttcatgtctgtctttcatagttgatacttgagaaaacgcgtcacctggaatatggaaggatgttagtcgtcaaagatgttgacgactaacatcatgattatgctcttgacgcgaagtcccgaataggggaccatcactgagcaaacttgcacaaacagtgaactagaatcttatgtccctattgcaattgtagcaactcttgaacactaaggatccgtttggtttaatgtgttattagatgaaatatttatggtataaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="95338" stop="54606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95038" g_stop="94628" g_length="411"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="411" r_length="411" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94627" i_stop="93504" i_length="1124">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93503" g_stop="93477" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="412" r_stop="438" r_length="27" r_score="0.852"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E220266" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220266" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="95038" e_stop="94628"/>
          <exon e_start="93503" e_stop="93477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAAAACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTATCTAGTGACTCCTTTGTAATTTCAGTCTTGCATAGGCATTATGTTAATACATTAGTGTATTATACTATTCCGTTTCAATTTATTTGTCATATTTTGACTTGGAAAATAGTTTAGGAAAATAAATAAACTTTTGAATCTTGTGGTCTCAAAATATAAATATATCAAATGCATCAAAATGTGTTTTTAATCTTGTGGTCTTAAAGATGTTACCTGGAAAATTGAAATTAAAAATATGTCAAAAAAGGAAAAAGACATTCTTTACCTGACGGACCAAAAAAGAAAGCAAGACAAACAAATTGAAACTGATTGCATGAGTTTATTGTAGTGATCAAAGTTTTGTAATGCTAGTCCTTCTAATTTTTTTTTAACAAGTGAATAATCAAATCAAAATCGATATACATATATCATATTTAGTTTGGTTTTAATAATATTTTGAGAACCGATTAGATTAATTTGAACTTTTTTAATCAATCATCGACCTATGAACACCATAATACATAAACACACCATTTAACTTAATCTCATTTTACATTTATGTTCTTCAACTTTGAGTGTCCACAAATAGACATTTAAACTTGTATAAAGTTAAACAAAAATAGACACGTGAGTCCTACATGTTACAATACACGTAGGGCACCATCTAGGATACAAATTTTTATGTATATACAAGTTTAAACAAAAATAGACACGTGAGTCCTACATGTTACAATACACGTAGGGCACCATCTAGGATACAAATTTTTATGTAGAACGTTGGAGGGCATAAATGTAAACAAGTCCAAGTTAAAGAATATATTTATATATTATGCCTTTATATAATATGACTTAAAAATATTATAACTTTCAAATGAAAATTATAAATTACTTCACAAATAAATGACCTCAAAATATTATGTCCCATTAAATAATTTTGTCCTCTCAACCAAATAAAATTAGTTATAAAATGAAGAAGTCAAATAACTCCCTAACCTTGTATTAAATATAAGATCATCCTTAAACTACTCCACAACAATCTCTCTACCATTATTCCTTTGAAAAAAAATTATCCCTATAAATAGTTGAATATATCATTTATATTCAAATTGTGACACACACAAGAGAAGAAAGAAAAACCAAAAAAATAAAAAATAAAAA</genome_strand>
        <mrna_strand>ATTTCCAAGGAATACATGGAAGCAAAACCAGCTCAAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAAAACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTAATGTGTTATTAGATGAAATATTTATGGTATAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E220169" ref_strand="-" ref_description="SGN-E220169 [cLEL-12-D14]">
      <seq>taaaggtattgctgctggaatgcagaatactggttaagctaatcctatttcatgtctgtctttcatagttaatacttgagaaaacgcgtcacctggaatatggaaggatgttagtcgtcaaagatgttacgcactaacatcatgattatgctcttgacgcgaagtcccgaataggggaccatcactgagcaaacttgcacaaacagtgaactagaatcttatgtccctattgcaattgtagcaactcttgaacactaaggatccgtttggtttgatgtgttattagatgaaatatttatggtataaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="95233" stop="54606"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94934" g_stop="94628" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="307" r_length="307" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94627" i_stop="93504" i_length="1124">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93503" g_stop="93477" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="334" r_length="27" r_score="0.852"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E220169" ref_strand="-">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>334</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E220169" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="94934" e_stop="94628"/>
          <exon e_start="93503" e_stop="93477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAAAACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTTGACG-ACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTATCTAGTGACTCCTTTGTAATTTCAGTCTTGCATAGGCATTATGTTAATACATTAGTGTATTATACTATTCCGTTTCAATTTATTTGTCATATTTTGACTTGGAAAATAGTTTAGGAAAATAAATAAACTTTTGAATCTTGTGGTCTCAAAATATAAATATATCAAATGCATCAAAATGTGTTTTTAATCTTGTGGTCTTAAAGATGTTACCTGGAAAATTGAAATTAAAAATATGTCAAAAAAGGAAAAAGACATTCTTTACCTGACGGACCAAAAAAGAAAGCAAGACAAACAAATTGAAACTGATTGCATGAGTTTATTGTAGTGATCAAAGTTTTGTAATGCTAGTCCTTCTAATTTTTTTTTAACAAGTGAATAATCAAATCAAAATCGATATACATATATCATATTTAGTTTGGTTTTAATAATATTTTGAGAACCGATTAGATTAATTTGAACTTTTTTAATCAATCATCGACCTATGAACACCATAATACATAAACACACCATTTAACTTAATCTCATTTTACATTTATGTTCTTCAACTTTGAGTGTCCACAAATAGACATTTAAACTTGTATAAAGTTAAACAAAAATAGACACGTGAGTCCTACATGTTACAATACACGTAGGGCACCATCTAGGATACAAATTTTTATGTATATACAAGTTTAAACAAAAATAGACACGTGAGTCCTACATGTTACAATACACGTAGGGCACCATCTAGGATACAAATTTTTATGTAGAACGTTGGAGGGCATAAATGTAAACAAGTCCAAGTTAAAGAATATATTTATATATTATGCCTTTATATAATATGACTTAAAAATATTATAACTTTCAAATGAAAATTATAAATTACTTCACAAATAAATGACCTCAAAATATTATGTCCCATTAAATAATTTTGTCCTCTCAACCAAATAAAATTAGTTATAAAATGAAGAAGTCAAATAACTCCCTAACCTTGTATTAAATATAAGATCATCCTTAAACTACTCCACAACAATCTCTCTACCATTATTCCTTTGAAAAAAAATTATCCCTATAAATAGTTGAATATATCATTTATATTCAAATTGTGACACACACAAGAGAAGAAAGAAAAACCAAAAAAATAAAAAATAAAAA</genome_strand>
        <mrna_strand>TAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTAATACTTGAGAAAACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTT-ACGCACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E572727" ref_strand="+" ref_description="SGN-E572727 [31926]">
      <seq>gaacactaaggatccctttggtttgatgtgttattagatgaaatattgatggtataaaatttggtatttgctttatccagtgtctcctttgtaatttcagacttgcataggcataatgttaatacattagtgtattatactcttctgtttcaatttgtttgtcatattttgacttgatacataatttaggaaagtaaagaaaacttttgaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="94985" stop="94176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94685" g_stop="94472" g_length="214"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.902"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E572727" ref_strand="+">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>214</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E572727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94685" e_stop="94472"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTATCTAGTGACTCCTTTGTAATTTCAGTCTTGCATAGGCATTATGTTAATACATTAGTGTATTATACTATTCCGTTTCAATTTATTTGTCATATTTTGACTTGGAAAATAGTTTAGGAAAATAAA-TAAACTTTTGAATCTT</genome_strand>
        <mrna_strand>GAACACTAAGGATCCCTTTGGTTTGATGTGTTATTAGATGAAATATTGATGGTATAAAATTTGGTATTTGCTTTATCCAGTGTCTCCTTTGTAATTTCAGACTTGCATAGGCATAATGTTAATACATTAGTGTATTATACTCTTCTGTTTCAATTTGTTTGTCATATTTTGACTTGATACATAATTTAGGAAAGTAAAGAAAACTTTTGAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E294730" ref_strand="+" ref_description="SGN-E294730 [cLET-17-I17]">
      <seq>aagtcccgaataggggaccatcactgagcaaacttgcacaaacagtgaactagaatcttatgtccctattgcaattgtagcaactcttgaacactaaggatccgtttggtttgatgtgttattagatgaaatatttatggtataaaatttggtatttgctttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="95073" stop="94311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94773" g_stop="94602" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E294730" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>172</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94773" e_stop="94602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTATCTAGTGAC</genome_strand>
        <mrna_strand>AAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E294731" ref_strand="+" ref_description="SGN-E294731 [cLET-17-I17]">
      <seq>aagtcccgaataggggaccatcactgagcaaacttgcacaaacagtgaactagaatcttatgtccctattgcaattgtagcaactcttgaacactaaggatccgtttggtttgatgtgttattagatgaaatatttatggtataaaatttggtatttgctttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="95073" stop="94311"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94773" g_stop="94602" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E294731" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>172</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94773" e_stop="94602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTATCTAGTGAC</genome_strand>
        <mrna_strand>AAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E744783" ref_strand="+" ref_description="SGN-E744783 [GI|6688530]">
      <seq>gactgttgagtgagaaatgactactaggaatttggacaaacttgcatcgattgatgcacagttgaggcaactggtgcctgctaaagtttctgaagatgataaacttgttgagtatgatgctttgcttttggataggtttcttgatattcttcaagatttgcatggagaggatctcaaaggaacagtccaagattgttatgagctttctgccgagtatgaagccaagcatgatccgaagaagctggaggaacttggcaatgtgttgacaagtttggtaccaggggattcaattgttattgctaaagctttctctcacatgcttaacttggccaatttggctgaggaggttcagattgcctaccgtaggcgccaaaaattgaagaaaaagggagattttggggatgagagtaatgcaacaactgagtcagatattgaagaaactttcaagaaactggtgggggacttaaagaagtcccctcaagaagtttttgatgctatcaagaatcagactgtggatttggtcctaacagctcatcctactcaatctgtacgaagatcattgcttcaaaagcatggaaggatccgtgactgcttggctcagttgtatgctaaagacattacacccgatgataaacaagaacttgacgaagctttacagagggagatccaagctgcgttccgaactgatgagatccgaagaactcctcctactccacaagatgaaatgagagctggaatgagctatttccatgaaacaatttggaagggtgtgccaaagtttctgcgtcgtgttgatacagctcttaaaaacatagggattgatgaacgagttccttataatgctcctcttattcaattctcctcttggatgggcggtgatcgtgatggtaatccaagagtgactcccgaggtcacaagagatgtttgcttattggcaagaatgatggcagctaacttgtactattcgcaaatagaggacctcatgtttgagttatctatgtggcgctgcagtgaagagcttcgtgtgcgagcacataaactccaaaggtcttggagagatgaaaaacactacatagaattttggaagcaagttcctccaaatgaaccctatcgtgtaattcttggtgatgtgagagataagttgtatcagacacgcgagctggctcgccaactgttaggccatggatactctgaaattccagaggaagcaacttatactaatattgagcagttcttggagcctcttgagctctgctacagctctctttgtgcttgtggtgatctctccatagcggatggtagccttctggatttccttagacaagtttctacgtttggactttcactagtgagacttgacataagacaagagtcggaccgccatactgatgtgcttgatgctattacgcagcatttggaaattggttcatatcgagaatggtctgaagaacgtagacaagagtggcttctgtctgaactcagtggcaagagacctttatttggacgggatcttccaaaaactgaagaaattgctgatgttttggatacgttccatgtcatagccgaactcccagcagactgctttggggcatacatcatctcaatggccactgcaccatctgatgtgcttgcagttgagcttctacagcgtgaatgccgagttaggcaacctttacgagttgttccactttttgagaagttggccgatctggatgctgctcctgcagccgttgcacgtcttttctcaattgagtggtacagaaaccggattaatggcaagcaagaagtgatgattggatactccgactctggcaaggatgcaggtcggctctcagcatcctggcagttatataaggctcaagaggagcttatacaagtcgccaaggagttcgacgtgaagctaaccatgttccatggtagaggtggtacagtgggaagaggaggtggccccgcccatcttgccatattgtctcaaccacccgaaacaattcacggatctctccgtgttacagttcagggtgaggttattgagcagtcttttggggaagaacacttgtgttttaggacactccagcgttttactgctgctacacttgaacatgggatgcatccaccagtctctccaaaaccagaatggcgtgcacttatggacgaaattgcagttgttgcaacagaaaagtatcgatcaatagtttttaaggaaccccgatttgtcgagtatttccgcctggccacacccgagttagagtatggtcgaatgaacattggcagccgtccatcaaagcgtaaacccagcggaggcatagaatcacttagagctattccgtggatctttgcttggactcaaactagattccatcttccagtctggctcggctttggagcagcatttaagtatgccattgaaaaggatatcaaaaaccttcgcatgctgcaggaaatgtacaatgcatggcctttctttagggtaactattgatttggttgagatggtgttcgccaaaggagacccaggcattgctgcattgttcgacaagcttctggtatctgaagatttgttgtctttcggcgaacttttgaggtcaaactatgaggagacaaagagcctcctcctgcagattgctggacacaaggatcttctggagggtgatccgtacttaaaacaacgactcaggctgcgtgactcctacatcacaacattgaacgtgtgtcaagcctacaccctaaagcgtattcgtgacccagactacagtgtcacaccaaggcctcacatttccaaggaatacatggaatcaaaaccagctacagaacttgtgaacctgaacccgactagcgaatatgcacctggcttggaggacacactcatcttgaccatgaaaggtattgccgctggaatgcagaatactggttaagctaatcctatttcatgtctgtctttcatatttgatacttgagaaaacgcgtcacctggaatatggaaggatggttagtcgtcaaagatgttgacgactaacatcatgattatgctcttgacgcgaagtcccgaataggggaccatcactgagcaaacttgcacaaacagtgaagtagaatcttatgtcctattgcaattgtagcaactcttgaacactaaggatccgttggttgatgtgttattagatgaaatatttatggtataaaattggtattgctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="100513" stop="94313"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100213" g_stop="100030" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100029" i_stop="99183" i_length="847">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99182" g_stop="98788" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="579" r_length="395" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98787" i_stop="98612" i_length="176">
            <donor d_prob="0.923" d_score="0.98"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98611" g_stop="98527" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="664" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98526" i_stop="98093" i_length="434">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98092" g_stop="97870" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="887" r_length="223" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97673" g_stop="97570" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="888" r_stop="991" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="97466" g_stop="97379" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="992" r_stop="1076" r_length="85" r_score="0.955"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153">
            <donor d_prob="0.956" d_score="0.92"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="97225" g_stop="97071" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1077" r_stop="1231" r_length="155" r_score="0.987"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="97070" i_stop="96793" i_length="278">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.760" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="96792" g_stop="95794" g_length="999"/>
          <reference_exon_boundary r_type="cDNA" r_start="1232" r_stop="2230" r_length="999" r_score="0.994"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="95793" i_stop="95695" i_length="99">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="95694" g_stop="95308" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="2231" r_stop="2617" r_length="387" r_score="0.982"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="95307" i_stop="95192" i_length="116">
            <donor d_prob="0.959" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="95191" g_stop="94613" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="2618" r_stop="3192" r_length="575" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E744783" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>3199</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E744783" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100213" e_stop="100030"/>
          <exon e_start="99182" e_stop="98788"/>
          <exon e_start="98611" e_stop="98527"/>
          <exon e_start="98092" e_stop="97870"/>
          <exon e_start="97673" e_stop="97570"/>
          <exon e_start="97466" e_stop="97379"/>
          <exon e_start="97225" e_stop="97071"/>
          <exon e_start="96792" e_stop="95794"/>
          <exon e_start="95694" e_stop="95308"/>
          <exon e_start="95191" e_stop="94613"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTGTTGAGTGAGATATGGCTACTAAGAATTTGGAGAAACTTGCTTCAATTGATGCACAGTTGAGGCAACTGGTGCCTGCTAAAGTTTCTGAAGATGATAAACTTGTTGAGTATGATGCTTTGCTTTTGGATAGGTTTCTTGATATTCTTCAAGATTTGCATGGAGAGGATCTCAAAGGAACAGTATGCATTTTTCCCAATTTAATTTAACCTATGAATGATTAGAAAATTGTAAATTATCTACCAAAGTTGTAGTTTTTGATGTTGTATGAAGTTCTGTGATTTTGGTCTTTTGGTTACTAAGGGGTTGTTGCTTTTGTGTTCCACTTTTAATCTGGTGTATTTCTTGAAGTTAAAGATTGGATTTTTATGTCACTAGTAAAAAAAGGTAAAAAGATTGGATTTTTATGTCTTGTAAAAAAGGGGATAAAAGATTGGATTTTTATGTCTGTTCTTTGTTGAATTGACTAGAAACACTTGAATTGGTTACTAAGGGGTGTTGTTTTGTCTTCCACTTTTAATCTGGTTTATTTCTTGATGGTAAAGATTGAATTTTTATGTCATTTATAAAAAGGGGAATAAAAAAATTGGATTTTTATGTCTGTTCTGACTGAGTGAACTACAAACATTTGATTCTGAGGTGTGTGTAATACTTTGAGATTGTATTGATATAGTGGTATTCATATGCTTCAGTATAGTTTGACTGTGTTAGTGGATGAAGTCCCCATGTGTATGTTGACTTGAAATCCTAAACTTGTGTTGACCAAGTAGTCTGTTTGTTAGAATGTTTTGTCGTGTTTGCTAGATTTCTTCACTTCTGTTATTTCTTTTTTCGATCTGATTTTTCTTAAATCGAGGGTATATCGGAAACCGTCTCTCTACCTTTTCAAGGTAGGGGTAAGGTCTTGGTACACTCTACCCTCCCCAGACCCTACTTGTGTGGGATTACACTGAGTATGTTGTTGTTATTGTTGTAATTGCAAAAGACTGGTCAATATTGAAGTTTTTGATTTCTTCGATCTCACATTAGGTCCAAGATTGTTATGAGCTTTCTGCCGAGTATGAAGCCAAGCATGATCCGAAGAAGCTGGAGGAACTTGGCAATGTGTTGACAAGTTTGGATCCAGGGGATTCAATTGTTATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCAGATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAAGGAGATTTCGGGGATGAGAGTAATGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAACTGGTGGGGGACTTAAAGAAGTCCCCCCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATTTGGTCCTAACAGCTCATCCTACTCAATCTGTACGAAGATCATTGCTTCAAAAGCATGGCAGGTTTGGTCTTTAATCACAATGTTTATTGTCTTCAGCAGTTCGAGTTGTCTCCTTGGCTTGTCATTTTATGTTAGTTTATGCTTCGATATTTTCCCTAATAAATATAAAGGGGAAATGCTCTTTTCGGACCAAATTTCGTGCTTTCATCGGTTGTTTACTAACTTGTTCTAACTCAGGATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAGGTAACTATTGACGTTTAGTTAGTTGATTCATGTGTTTTCCTTGAATGAAATTCTATTATTAGTACCTTCAATTCCGATGTCTTTCTAACTCTACTAATCGATATTTTTGTGCTTCAATGTCATATAGATATGTCTTGATCTAGCAGGCTTTGTATTAATGTAGTTTTACTTTCTAAACTTGATGGATATGACATATCCATGGACTTAATTTTTGCATCCATCTCGTGAAGATTGGAGAAGCAAAAATTATCTCATAAGTTACCCATTGAATATTTGTCCCTTCATTCATCTGAATCGTATTTTACCCTGTAAAGAGTGCAGCTAGTTATATGATTACTCTAAAATTGTAATAAGGAATCTTCAAAATCAAATATGTGTCGCATTCTATGGATCTTTCTTTTTTGATAAAAATCTGCTACTTACTTCCTCTGTAGATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATGGTATGATTCCTTAACTGTAGAGAATGTTTGCAGTTACTTTAGCTAAAAGCTGAGAAAACAAAATAGGAATTCGGATTACATAATTTTGAAGGGGTGGAGGAAACCAAAGTACTCCTTCTGCTTGAACGTGGATTACTTAGTTACTACATGCAGTAGATAGTCCTTATTTACCTGTCAACTCTGCTACAAAATACAGGTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAGGTATCCAACAATTAAATGTTTTTGACAATTTTGTCTCGATTCATTTAGTGAAAGAAATCAGACTATCTACACTGATCTTTTTCTAAATTGTACAATTTTTCAGTTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCAGATAAACTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAGGTAACTAATTGAATATTGCTATTGAGGTTGATCCATGAAATTGAATCAAAGAAGAGTTTGGTAGTTGAATATAACCTTGATAGGACTGTTAAAGAATCTTTGGACAGAGAAATCCCATAATCTGTGATCTTATAACGTTTTCTTCTCATGCAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAGGTTCATAATACTATACTTCTGTCTTTTCCTGTGACTGCTTTCTATATGTAGAGCCTCCTAAATTAAGCAGTGAACATTCACTTGTACTCTTTACTAGTCTTACTAAACAACTTGACATGTTATTCATCGAAAAAAGGAACTAGAAAAACATGAGCAAGTGTGTCTGTTTCTTGTTGAATAACAGCATAAGCATTTGCATGGTTGTTCTATTAAACCGAAATTTATAAATATCTGTGTTGCATGTCATATAATACTAATATGGTCATCATTTTATGTAGTTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTGGAAATTGGTTCATATCGAGAATGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACGGGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAGCGTGAATGCCGAGTTAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCCGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTGGTACAGAAACCGGATTAATGGCAAGCAAGAAGTGATGATTGGATACTCCGACTCTGGCAAGGATGCAGGTCGGCTCTCAGCAGCCTGGCAGTTATATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTCGACGTGAAGCTAACCATGTTCCATGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCACTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAACGTTATACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCTACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTCGAGTATTTCCGCCTGGTAAGTATGCTAGCGATGAACTCAGTTATTAATTACAGATGCTATCACAAATATTGCCTTGAGTTGTAATAAGCTATTTTTCATTGATCATGTTTGCAGGCCACACCTGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATCGAAAAGGATATCAAGAACCTCCGCATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGTGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAGGTAATGTGACATATACTTCTGAAAAAGATCGGTTGAACACTTGTTGTGTTCAATTGCTTCACAAACTAGTTCCAAGTTAGTGCATCTAAACATAATTTTCCCCTTATTCAAAATAGATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAAAACGCGTCACCTGGAATATGGAAGGAT-GTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTT</genome_strand>
        <mrna_strand>GACTGTTGAGTGAGAAATGACTACTAGGAATTTGGACAAACTTGCATCGATTGATGCACAGTTGAGGCAACTGGTGCCTGCTAAAGTTTCTGAAGATGATAAACTTGTTGAGTATGATGCTTTGCTTTTGGATAGGTTTCTTGATATTCTTCAAGATTTGCATGGAGAGGATCTCAAAGGAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGATTGTTATGAGCTTTCTGCCGAGTATGAAGCCAAGCATGATCCGAAGAAGCTGGAGGAACTTGGCAATGTGTTGACAAGTTTGGTACCAGGGGATTCAATTGTTATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCAGATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAGGGAGATTTTGGGGATGAGAGTAATGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAACTGGTGGGGGACTTAAAGAAGTCCCCTCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATTTGGTCCTAACAGCTCATCCTACTCAATCTGTACGAAGATCATTGCTTCAAAAGCATGGAAG................................................................................................................................................................................GATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATG....................................................................................................................................................................................................GTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAG.......................................................................................................TTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCACATAAACTCCAAAGGTCTT---GGAGAGATGAAAAACACTACATAG.........................................................................................................................................................AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCTGGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAG......................................................................................................................................................................................................................................................................................TTCTTGGAGCCTCTTGAGCTCTGCTACAGCTCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTGGAAATTGGTTCATATCGAGAATGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACGGGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAGCGTGAATGCCGAGTTAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCCGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTGGTACAGAAACCGGATTAATGGCAAGCAAGAAGTGATGATTGGATACTCCGACTCTGGCAAGGATGCAGGTCGGCTCTCAGCATCCTGGCAGTTATATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTCGACGTGAAGCTAACCATGTTCCATGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCAGTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAGCGTTTTACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCAACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTCGAGTATTTCCGCCTG...................................................................................................GCCACACCCGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCGTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATTGAAAAGGATATCAAAAACCTTCGCATGCTGCAGGAAATGTACAATGCATGGCCTTTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGCGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAG....................................................................................................................ATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAATCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCCGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATATTTGATACTTGAGAAAACGCGTCACCTGGAATATGGAAGGATGGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAAGTAGAATCTTATGT-CCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCG-TTGG-TTGATGTGTTATTAGATGAAATATTTATGGTATAAAA-TTGGTA-TTGCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E624662" ref_strand="+" ref_description="SGN-E624662 [GI|963080]">
      <seq>gactgttgagtgagaaatgactactaggaatttggacaaacttgcatcgattgatgcacagttgaggcaattggtgcctgctaaagtttctgaagatgataaacttgttgagtatgatgctttgcttttggataggtttcttgatattcttcaagatttacatggggaggatctcaaagaaacagtccaagagtgttatgagctttctgccgagtatgaagccaagcatgatccgaagaagctggaggaacttggcaatgtgttgacaagtttggacccaggagattcaattgtcattgctaaagctttctctcacatgcttaacttggccaatttggctgaggaggttcagattgcctaccgtaggcgccaaaaattgaagaaaaagggagattttggggatgagagcaatgcaacaactgagtcagatattgaagaaactttcaagaaattggtgggggacttgaagaagtcccctcaagaagtttttgatgctatcaagaatcagactgtggatctggtcctaacagctcatcctacacaatctgtacgaagatcattgcttcaaaagcatggaaggatccgtgactgcttggctcagttgtatgctaaagacatcacacccgatgataaacaagaacttgatgaggctttacagagggagatccaagctgcgttccgaactgatgagatccgaagaactcctcctactccacaagatgaaatgagagctggaatgagctatttccatgaaacaatttggaagggtgtaccaaagtttctgcgccgtgttgatacagctcttaaaaacatagggattaatgaacgagttccttataatgctcctcttattcaattctcctcttggatgggcggtgatcgtgatggtaatccaagagtgactcctgaggtcacaagagatgtttgcttattggccagaatgatggcagctaacttgtactattcgcaaatagaggacctcatgtttgagttatctatgtggcgctgcaatgaagaacttcgtgtgcgagcagatgatctccaaaggtcttcaaggagagatgaaaaacactacatagaattttggaagcaagttcctccaaatgaaccctatcgtgtaattcttggtgatgtgagagataagttgtatcagacacgtgagcgtgctcgccaactgttaggccatggatactctgaaattccagaggaagcaacttatactaatattgagcagttcttggagcctcttgagctctgctacagatctctttgtgcttgtggtgacctctccatcgcggatggtagccttctggatttcctgagacaagtttctacgtttggactttcacttgtgagacttgacataagacaagagtcggaccgccatactgatgtgcttgacgctattacgcaacatttggaaattggttcatatcgagactggtctgaagaacgtagacaagagtggcttctgtctgaactcagtggcaagagacctttatttggacctgatcttccaaaaactgaagaaattgctgatgttttggataccttccatgtcatagccgaactcccagcagactgcttcggggcatacatcatctcaatggccactgcaccatctgatgttcttgcagtagagcttctacagcgtgaatgccgagtgaggcaacctttacgagttgttccactttttgagaagttggctgatctggatgctgctcctgcagccgttgcacgtcttttctcaattgagtggtacagaaaccggattaatggcaagcaagaagtgatgattggatactccgactctggcaaggatgcaggtcggctatcagcagcctggcagttatataaggctcaagaggagcttatacaagtcgccaaggagttcgacgtgaagctaaccatgttccatggtagaggtggtacagtgggaagaggaggtggccccgcccatcttgccatattgtctcaaccacccgaaacaattcacggatctctccgtgttacagttcagggtgaggttattgagcagtcttttggggaagaacacttgtgttttaggacactccagcgttttactgctgctacacttgaacatgggatgcatccaccagtctctccaaaaccagaatggcgtgcacttatggacgaaattgcagttgttgcaacagaaaagtatcgatcaatagtttttaaggaaccccgatttgtcgagtatttccgcctggccacacccgagttagagtatggtcgaatgaacattggcagccgtccatcaaagcgtaaacccagcggaggcatagaatcacttagagctattccgtggatctttgcttggactcaaactagattccatcttccagtctggctcggctttggagcagcatttaagtatgccattgaaaaggatatcaaaaaccttcgcatgctgcaggaaatgtacaatgcatggcctttctttagggtaactattgatttggttgagatggtgttcgccaaaggagacccaggcattgctgcattgttcgacaagcttctggtgtccgaagatttgtggtctttcggtgaacttttgaggtcaaagtatgaggagacaaagagcctcctcctgcagattgctggacacaaggatcttctggagggtgatccatacttaaaacaacgactcaggttgcgtgactcctacatcacaacattgaacgtgtgtcaagcctacaccctaaagcgtattcgtgacccagactatagtgtcacaccaaggcctcacatttccaaggaatacatggaagcaaaaccagctacagaacttgtgaacctgaacccgactagcgaatatgcacctggcttggaggacacactcatcttaaccatgaaaggtattgctgctggaatgcagaatactggttagtcgtcacctggaatatggaagatgttaatcgtcaaagatgttgacgactaacatcatgattacgttcttggcgcaaagtcccgaatagggaccatcattgagcaaacttgcacaaacagtgaactagaatcttatgcccctattgtaattgtagtaactcttgaacactaaggatccctttggtttgatgtgttattagatgaaatattgatggtataaaatttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="100513" stop="94321"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="100213" g_stop="100030" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="184" r_length="184" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="100029" i_stop="99183" i_length="847">
            <donor d_prob="0.988" d_score="0.94"/>
            <acceptor a_prob="0.913" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99182" g_stop="98788" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="185" r_stop="579" r_length="395" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98787" i_stop="98612" i_length="176">
            <donor d_prob="0.923" d_score="0.96"/>
            <acceptor a_prob="0.911" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98611" g_stop="98527" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="580" r_stop="664" r_length="85" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98526" i_stop="98093" i_length="434">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98092" g_stop="97870" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="665" r_stop="887" r_length="223" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97673" g_stop="97570" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="888" r_stop="991" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="97466" g_stop="97379" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="992" r_stop="1079" r_length="88" r_score="0.955"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153">
            <donor d_prob="0.956" d_score="0.96"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="97225" g_stop="97071" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1080" r_stop="1234" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="97070" i_stop="96793" i_length="278">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.760" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="96792" g_stop="95794" g_length="999"/>
          <reference_exon_boundary r_type="cDNA" r_start="1235" r_stop="2233" r_length="999" r_score="0.980"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="95793" i_stop="95695" i_length="99">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="95694" g_stop="95308" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="2234" r_stop="2620" r_length="387" r_score="0.974"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="95307" i_stop="95192" i_length="116">
            <donor d_prob="0.959" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="95191" g_stop="94903" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="2621" r_stop="2909" r_length="289" r_score="0.986"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="94902" i_stop="94853" i_length="50">
            <donor d_prob="0.920" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.81"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="94852" g_stop="94621" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="2910" r_stop="3141" r_length="232" r_score="0.914"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E624662" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>3141</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="100213" e_stop="100030"/>
          <exon e_start="99182" e_stop="98788"/>
          <exon e_start="98611" e_stop="98527"/>
          <exon e_start="98092" e_stop="97870"/>
          <exon e_start="97673" e_stop="97570"/>
          <exon e_start="97466" e_stop="97379"/>
          <exon e_start="97225" e_stop="97071"/>
          <exon e_start="96792" e_stop="95794"/>
          <exon e_start="95694" e_stop="95308"/>
          <exon e_start="95191" e_stop="94903"/>
          <exon e_start="94852" e_stop="94621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTGTTGAGTGAGATATGGCTACTAAGAATTTGGAGAAACTTGCTTCAATTGATGCACAGTTGAGGCAACTGGTGCCTGCTAAAGTTTCTGAAGATGATAAACTTGTTGAGTATGATGCTTTGCTTTTGGATAGGTTTCTTGATATTCTTCAAGATTTGCATGGAGAGGATCTCAAAGGAACAGTATGCATTTTTCCCAATTTAATTTAACCTATGAATGATTAGAAAATTGTAAATTATCTACCAAAGTTGTAGTTTTTGATGTTGTATGAAGTTCTGTGATTTTGGTCTTTTGGTTACTAAGGGGTTGTTGCTTTTGTGTTCCACTTTTAATCTGGTGTATTTCTTGAAGTTAAAGATTGGATTTTTATGTCACTAGTAAAAAAAGGTAAAAAGATTGGATTTTTATGTCTTGTAAAAAAGGGGATAAAAGATTGGATTTTTATGTCTGTTCTTTGTTGAATTGACTAGAAACACTTGAATTGGTTACTAAGGGGTGTTGTTTTGTCTTCCACTTTTAATCTGGTTTATTTCTTGATGGTAAAGATTGAATTTTTATGTCATTTATAAAAAGGGGAATAAAAAAATTGGATTTTTATGTCTGTTCTGACTGAGTGAACTACAAACATTTGATTCTGAGGTGTGTGTAATACTTTGAGATTGTATTGATATAGTGGTATTCATATGCTTCAGTATAGTTTGACTGTGTTAGTGGATGAAGTCCCCATGTGTATGTTGACTTGAAATCCTAAACTTGTGTTGACCAAGTAGTCTGTTTGTTAGAATGTTTTGTCGTGTTTGCTAGATTTCTTCACTTCTGTTATTTCTTTTTTCGATCTGATTTTTCTTAAATCGAGGGTATATCGGAAACCGTCTCTCTACCTTTTCAAGGTAGGGGTAAGGTCTTGGTACACTCTACCCTCCCCAGACCCTACTTGTGTGGGATTACACTGAGTATGTTGTTGTTATTGTTGTAATTGCAAAAGACTGGTCAATATTGAAGTTTTTGATTTCTTCGATCTCACATTAGGTCCAAGATTGTTATGAGCTTTCTGCCGAGTATGAAGCCAAGCATGATCCGAAGAAGCTGGAGGAACTTGGCAATGTGTTGACAAGTTTGGATCCAGGGGATTCAATTGTTATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCAGATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAAGGAGATTTCGGGGATGAGAGTAATGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAACTGGTGGGGGACTTAAAGAAGTCCCCCCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATTTGGTCCTAACAGCTCATCCTACTCAATCTGTACGAAGATCATTGCTTCAAAAGCATGGCAGGTTTGGTCTTTAATCACAATGTTTATTGTCTTCAGCAGTTCGAGTTGTCTCCTTGGCTTGTCATTTTATGTTAGTTTATGCTTCGATATTTTCCCTAATAAATATAAAGGGGAAATGCTCTTTTCGGACCAAATTTCGTGCTTTCATCGGTTGTTTACTAACTTGTTCTAACTCAGGATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAGGTAACTATTGACGTTTAGTTAGTTGATTCATGTGTTTTCCTTGAATGAAATTCTATTATTAGTACCTTCAATTCCGATGTCTTTCTAACTCTACTAATCGATATTTTTGTGCTTCAATGTCATATAGATATGTCTTGATCTAGCAGGCTTTGTATTAATGTAGTTTTACTTTCTAAACTTGATGGATATGACATATCCATGGACTTAATTTTTGCATCCATCTCGTGAAGATTGGAGAAGCAAAAATTATCTCATAAGTTACCCATTGAATATTTGTCCCTTCATTCATCTGAATCGTATTTTACCCTGTAAAGAGTGCAGCTAGTTATATGATTACTCTAAAATTGTAATAAGGAATCTTCAAAATCAAATATGTGTCGCATTCTATGGATCTTTCTTTTTTGATAAAAATCTGCTACTTACTTCCTCTGTAGATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATGGTATGATTCCTTAACTGTAGAGAATGTTTGCAGTTACTTTAGCTAAAAGCTGAGAAAACAAAATAGGAATTCGGATTACATAATTTTGAAGGGGTGGAGGAAACCAAAGTACTCCTTCTGCTTGAACGTGGATTACTTAGTTACTACATGCAGTAGATAGTCCTTATTTACCTGTCAACTCTGCTACAAAATACAGGTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAGGTATCCAACAATTAAATGTTTTTGACAATTTTGTCTCGATTCATTTAGTGAAAGAAATCAGACTATCTACACTGATCTTTTTCTAAATTGTACAATTTTTCAGTTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCAGATAAACTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAGGTAACTAATTGAATATTGCTATTGAGGTTGATCCATGAAATTGAATCAAAGAAGAGTTTGGTAGTTGAATATAACCTTGATAGGACTGTTAAAGAATCTTTGGACAGAGAAATCCCATAATCTGTGATCTTATAACGTTTTCTTCTCATGCAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAGGTTCATAATACTATACTTCTGTCTTTTCCTGTGACTGCTTTCTATATGTAGAGCCTCCTAAATTAAGCAGTGAACATTCACTTGTACTCTTTACTAGTCTTACTAAACAACTTGACATGTTATTCATCGAAAAAAGGAACTAGAAAAACATGAGCAAGTGTGTCTGTTTCTTGTTGAATAACAGCATAAGCATTTGCATGGTTGTTCTATTAAACCGAAATTTATAAATATCTGTGTTGCATGTCATATAATACTAATATGGTCATCATTTTATGTAGTTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTGGAAATTGGTTCATATCGAGAATGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACGGGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAGCGTGAATGCCGAGTTAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCCGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTGGTACAGAAACCGGATTAATGGCAAGCAAGAAGTGATGATTGGATACTCCGACTCTGGCAAGGATGCAGGTCGGCTCTCAGCAGCCTGGCAGTTATATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTCGACGTGAAGCTAACCATGTTCCATGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCACTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAACGTTATACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCTACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTCGAGTATTTCCGCCTGGTAAGTATGCTAGCGATGAACTCAGTTATTAATTACAGATGCTATCACAAATATTGCCTTGAGTTGTAATAAGCTATTTTTCATTGATCATGTTTGCAGGCCACACCTGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATCGAAAAGGATATCAAGAACCTCCGCATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGTGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAGGTAATGTGACATATACTTCTGAAAAAGATCGGTTGAACACTTGTTGTGTTCAATTGCTTCACAAACTAGTTCCAAGTTAGTGCATCTAAACATAATTTTCCCCTTATTCAAAATAGATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAA--AACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGT</genome_strand>
        <mrna_strand>GACTGTTGAGTGAGAAATGACTACTAGGAATTTGGACAAACTTGCATCGATTGATGCACAGTTGAGGCAATTGGTGCCTGCTAAAGTTTCTGAAGATGATAAACTTGTTGAGTATGATGCTTTGCTTTTGGATAGGTTTCTTGATATTCTTCAAGATTTACATGGGGAGGATCTCAAAGAAACA...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCCAAGAGTGTTATGAGCTTTCTGCCGAGTATGAAGCCAAGCATGATCCGAAGAAGCTGGAGGAACTTGGCAATGTGTTGACAAGTTTGGACCCAGGAGATTCAATTGTCATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCAGATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAGGGAGATTTTGGGGATGAGAGCAATGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAATTGGTGGGGGACTTGAAGAAGTCCCCTCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATCTGGTCCTAACAGCTCATCCTACACAATCTGTACGAAGATCATTGCTTCAAAAGCATGGAAG................................................................................................................................................................................GATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATCACACCCGATGATAAACAAGAACTTGATGAGGCTTTACAGAGGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTACCAAAGTTTCTGCGCCGTGTTGATACAGCTCTTAAAAACATAGGGATTAATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATG....................................................................................................................................................................................................GTAATCCAAGAGTGACTCCTGAGGTCACAAGAGATGTTTGCTTATTGGCCAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAG.......................................................................................................TTATCTATGTGGCGCTGCAATGAAGAACTTCGTGTGCGAGCAGATGATCTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAG.........................................................................................................................................................AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGTGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAG......................................................................................................................................................................................................................................................................................TTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGACCTCTCCATCGCGGATGGTAGCCTTCTGGATTTCCTGAGACAAGTTTCTACGTTTGGACTTTCACTTGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGACGCTATTACGCAACATTTGGAAATTGGTTCATATCGAGACTGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACCTGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACCTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTCGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTTCTTGCAGTAGAGCTTCTACAGCGTGAATGCCGAGTGAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCTGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTGGTACAGAAACCGGATTAATGGCAAGCAAGAAGTGATGATTGGATACTCCGACTCTGGCAAGGATGCAGGTCGGCTATCAGCAGCCTGGCAGTTATATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTCGACGTGAAGCTAACCATGTTCCATGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCAGTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAGCGTTTTACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCAACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTCGAGTATTTCCGCCTG...................................................................................................GCCACACCCGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCGTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATTGAAAAGGATATCAAAAACCTTCGCATGCTGCAGGAAATGTACAATGCATGGCCTTTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTGTCCGAAGATTTGTGGTCTTTCGGTGAACTTTTGAGGTCAAAGTATGAGGAGACAAAGAGCCTCCTCCTGCAG....................................................................................................................ATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCATACTTAAAACAACGACTCAGGTTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTATAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTAACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTG..................................................GTTAGTCGTCACCTGGAATATGGAA-GATGTTAATCGTCAAAGATGTTGACGACTAACATCATGATTACGTTCTTGGCGCAAAGTCCCGAATA-GGGACCATCATTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGCCCCTATTGTAATTGTAGTAACTCTTGAACACTAAGGATCCCTTTGGTTTGATGTGTTATTAGATGAAATATTGATGGTATAAAATTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E587989" ref_strand="+" ref_description="SGN-E587989 [41533]">
      <seq>cttagagctattccgtggatctttgcttggactcaaactagattccatcttccagtctggctcggctttggagcagcatttaagtatgccattgaaaaggatatcaagaaccttcgcatgctgcaggaaatgtacaatgcatggcctttctttagggtaactattgatttggttgagatggtgttcgccaaaggagacccaggcattgctgcattgttcgacaagcttctggtgtctgaagatttgtggtctttcggtgaacttttgaggtcaaagtatgaggagacaaagagcctcctcctgcagattgctggacacaaggatcttctggagagtgatccatacttaaaacaacgactcaggttgcgtgactcctacatcacaacattgaacgtgtgtcaagcctacaccctaaagcgtattcgtgacccagactacagtgtcacaccaaggcctcacatttccaaggaatacatggaagcaaaaccagctacagaacttgtgaacctgaacccgactagcgaatatgcacctggcttggaggacacactcatcttaaccatgaaaggtattgctgctggaatgcagaatactggttagtcgtcacctggaatatggaagatgttaatcgtcaaagatgttgacgactaacatcatgattacattcttggcgaatagggaccatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="95913" stop="94487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95613" g_stop="95308" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="306" r_length="306" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95307" i_stop="95192" i_length="116">
            <donor d_prob="0.959" d_score="0.98"/>
            <acceptor a_prob="0.983" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95191" g_stop="94903" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="595" r_length="289" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="94902" i_stop="94853" i_length="50">
            <donor d_prob="0.920" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.81"/>
          </gDNA_intron_boundary>
          <shorter_than_min_intron_len/>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="94852" g_stop="94788" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="661" r_length="66" r_score="0.862"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E587989" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>660</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E587989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95613" e_stop="95308"/>
          <exon e_start="95191" e_stop="94903"/>
          <exon e_start="94852" e_stop="94788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATCGAAAAGGATATCAAGAACCTCCGCATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGTGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAGGTAATGTGACATATACTTCTGAAAAAGATCGGTTGAACACTTGTTGTGTTCAATTGCTTCACAAACTAGTTCCAAGTTAGTGCATCTAAACATAATTTTCCCCTTATTCAAAATAGATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAA--AACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATT</genome_strand>
        <mrna_strand>CTTAGAGCTATTCCGTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATTGAAAAGGATATCAAGAACCTTCGCATGCTGCAGGAAATGTACAATGCATGGCCTTTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTGTCTGAAGATTTGTGGTCTTTCGGTGAACTTTTGAGGTCAAAGTATGAGGAGACAAAGAGCCTCCTCCTGCAG....................................................................................................................ATTGCTGGACACAAGGATCTTCTGGAGAGTGATCCATACTTAAAACAACGACTCAGGTTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTAACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTG..................................................GTTAGTCGTCACCTGGAATATGGAA-GATGTTAATCGTCAAAGATGTTGACGACTAACATCATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E288439" ref_strand="+" ref_description="SGN-E288439 [cLES-16-H4]">
      <seq>tagattccatcttccagtctggctcggctttggagcagcatttaagtatgccatcgaaaaggatatcaagaacctccgcatgctgcaggaaatgtacaatgcatggccattctttagggtaactattgatttggttgagatggtgttcgccaaaggagacccaggcattgctgcattgttcgacaagcttctggtatctgaagatttgttgtctttcggtgaacttttgaggtcaaactatgaggagacaaagagcctcctcctgcagattgctggacacaaggatcttctggagggtgatccgtacttaaaacaacgactcaggctgcgtgactcctacatcacaacattgaacgtgtgtcaagcctacaccctaaagcgtattcgtgacccagactacagtgtcacaccaaggcctcacatttccaaggaatacatggaagcaaaaccagctacagaacttgtgaacctgaacccgactagcgaatatgcacctggcttggaggacacactcatcttgaccatgaaaggtattgctgctggaatgcagaatactggttaagctaatcctatttcatgtctgtctttcatagttgatacttgagaaaacgcgtcacctgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="95875" stop="94539"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95575" g_stop="95308" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="268" r_length="268" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95307" i_stop="95192" i_length="116">
            <donor d_prob="0.959" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95191" g_stop="94839" g_length="353"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="621" r_length="353" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E288439" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95575" e_stop="95308"/>
          <exon e_start="95191" e_stop="94839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATCGAAAAGGATATCAAGAACCTCCGCATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGTGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAGGTAATGTGACATATACTTCTGAAAAAGATCGGTTGAACACTTGTTGTGTTCAATTGCTTCACAAACTAGTTCCAAGTTAGTGCATCTAAACATAATTTTCCCCTTATTCAAAATAGATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAAAACGCGTCACCTGG</genome_strand>
        <mrna_strand>TAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATCGAAAAGGATATCAAGAACCTCCGCATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGTGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAG....................................................................................................................ATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAAAACGCGTCACCTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E574182" ref_strand="+" ref_description="SGN-E574182 [33609]">
      <seq>ggctatcagcagcctggcagttgtataaggctcaataggagcttatacaagtcgccaaggagtttgacgtgaagctaaccatgttccatggcagaggtggtacagtgggaagaggaggtggccccgcccatcttgccatattgtctcaaccacccgaaacaattcacggatctctccgtgttacagttcagggtgaggttattgagcagtcttttggggaagaacacttgtgttttaggacactccagcgttttactgctgctacacttgaacatgggatgcatccaccagtctctccaaaaccagaatggcgtgcacttatggacgaaattgcagttgttgctacagaaaagtatcgatcaatagtttttaaggaaccccgatttgttgagtatttccgcctggccacacccgagttagagtatggtcgaatgaacattggcagccgtccatcaaagcgtaaacccagcggaggcatagaatcacttagagctattccgtggatctttgcttggactcaaactagattccatcttccagtctggctcggctttggagcagcattttaagtatgccattggaaaggatatcaaaaaaccttcgcaatgctgcaggaaatgtacaatgcatgggctttctttagggtaaactattgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="96497" stop="95146"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96197" g_stop="95794" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="404" r_length="404" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="95793" i_stop="95695" i_length="99">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="95694" g_stop="95446" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="657" r_length="253" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E574182" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E574182" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96197" e_stop="95794"/>
          <exon e_start="95694" e_stop="95446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTCTCAGCAGCCTGGCAGTTATATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTCGACGTGAAGCTAACCATGTTCCATGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCACTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAACGTTATACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCTACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTCGAGTATTTCCGCCTGGTAAGTATGCTAGCGATGAACTCAGTTATTAATTACAGATGCTATCACAAATATTGCCTTGAGTTGTAATAAGCTATTTTTCATTGATCATGTTTGCAGGCCACACCTGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCA-TTTAAGTATGCCATCGAAAAGGATATC-AAGAACCTCCGC-ATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGT-AACTATTGAT</genome_strand>
        <mrna_strand>GGCTATCAGCAGCCTGGCAGTTGTATAAGGCTCAATAGGAGCTTATACAAGTCGCCAAGGAGTTTGACGTGAAGCTAACCATGTTCCATGGCAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCAGTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAGCGTTTTACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCTACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTTGAGTATTTCCGCCTG...................................................................................................GCCACACCCGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCGTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTTAAGTATGCCATTGGAAAGGATATCAAAAAACCTTCGCAATGCTGCAGGAAATGTACAATGCATGGGCTTTCTTTAGGGTAAACTATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E603877" ref_strand="+" ref_description="SGN-E603877 [67066]">
      <seq>aggtcttcaaggagagatgaaaaacactacatagaattttggaagcaagttcctccaaatgaaccctatcgtgtaattcttggtgatgtgagagataagttgtatcagacacgtgagcgtgctcgccaactgttaggccatggatactctgaaattccagaggaagcaacttatactaatattgagcagttcttggagcctcttgagctctgctacagatctctttgtgcttgtggtgacctctccatcgcggatggtagccttctggatttcctgagacaagtttctacgtttggactttcacttgtgagacttgacataagacaagagtcggaccgccatactgatgtgcttgacgctattacgcaacatttggaaattggttcatatcgagactggtctgaagaacgtagacaagagtggcttctgtctgaactcagtggcaagagacctttatttggacctgatcttccaaaaactgaagaaattgctgatgttttggatacgttccatgtcatagccgaactcccagcagactgcttcggggcatacatcatctcaatggccactgcaccatctgatgttcttgcagtagagcttctacagcgtgaatgccgagtgaggcaacctttacgagttgttccactttttgagaagttggctgatctggatgctgctcctgcagccgttgcacgtcttgtctcaattgagtggtacagaaaccggatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="97712" stop="95952"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97412" g_stop="97379" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="34" r_length="34" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153">
            <donor d_prob="0.956" d_score="0.00"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97225" g_stop="97071" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="35" r_stop="189" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97070" i_stop="96793" i_length="278">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.760" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96792" g_stop="96252" g_length="541"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="730" r_length="541" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E603877" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E603877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97412" e_stop="97379"/>
          <exon e_start="97225" e_stop="97071"/>
          <exon e_start="96792" e_stop="96252"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTCTTCAAGGAGAGATGAAAAACACTACATAGGTAACTAATTGAATATTGCTATTGAGGTTGATCCATGAAATTGAATCAAAGAAGAGTTTGGTAGTTGAATATAACCTTGATAGGACTGTTAAAGAATCTTTGGACAGAGAAATCCCATAATCTGTGATCTTATAACGTTTTCTTCTCATGCAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAGGTTCATAATACTATACTTCTGTCTTTTCCTGTGACTGCTTTCTATATGTAGAGCCTCCTAAATTAAGCAGTGAACATTCACTTGTACTCTTTACTAGTCTTACTAAACAACTTGACATGTTATTCATCGAAAAAAGGAACTAGAAAAACATGAGCAAGTGTGTCTGTTTCTTGTTGAATAACAGCATAAGCATTTGCATGGTTGTTCTATTAAACCGAAATTTATAAATATCTGTGTTGCATGTCATATAATACTAATATGGTCATCATTTTATGTAGTTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTGGAAATTGGTTCATATCGAGAATGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACGGGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAGCGTGAATGCCGAGTTAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCCGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTGGTACAGAAACCGGATTA</genome_strand>
        <mrna_strand>AGGTCTTCAAGGAGAGATGAAAAACACTACATAG.........................................................................................................................................................AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGTGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAG......................................................................................................................................................................................................................................................................................TTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGACCTCTCCATCGCGGATGGTAGCCTTCTGGATTTCCTGAGACAAGTTTCTACGTTTGGACTTTCACTTGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGACGCTATTACGCAACATTTGGAAATTGGTTCATATCGAGACTGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACCTGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTCGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTTCTTGCAGTAGAGCTTCTACAGCGTGAATGCCGAGTGAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCTGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTGTCTCAATTGAGTGGTACAGAAACCGGATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E246856" ref_strand="+" ref_description="SGN-E246856 [cLEF-41-I10]">
      <seq>tgaaattccagaggaagcaacttatactaatattgagcagttcttggagcctcttgagctctgctacagatctctttgtgcttgtggtgatctctccatagcggatggtagccttctggatttccttagacaagtttctacgtttggactttcactagtgagacttgacataagacaagagtcggaccgccatactgatgtgcttgatgctattacgcagcatttggaaattggttcatatcgagaatggtctgaagaacgtagacaagagtggcttctgtctgaactcagtggcaagagacctttatttggacgggatcttccaaaaactgaagaaattgctgatgttttggatacgttccatgtcatagccgaactcccagcagactgctttggggcatacatcatctcaatggccactgcaccatctgatgtgcttgcagttgagcttctacagcgtgaatgccgagttaggcaacctttacgagttgttccactttttgagaagttggccgatctggatgctgctcctgcagccgttgcacgtcttttctcaattgagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="97410" stop="95969"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97110" g_stop="97071" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97070" i_stop="96793" i_length="278">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.760" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96792" g_stop="96269" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="564" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E246856" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E246856" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97110" e_stop="97071"/>
          <exon e_start="96792" e_stop="96269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAGGTTCATAATACTATACTTCTGTCTTTTCCTGTGACTGCTTTCTATATGTAGAGCCTCCTAAATTAAGCAGTGAACATTCACTTGTACTCTTTACTAGTCTTACTAAACAACTTGACATGTTATTCATCGAAAAAAGGAACTAGAAAAACATGAGCAAGTGTGTCTGTTTCTTGTTGAATAACAGCATAAGCATTTGCATGGTTGTTCTATTAAACCGAAATTTATAAATATCTGTGTTGCATGTCATATAATACTAATATGGTCATCATTTTATGTAGTTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTGGAAATTGGTTCATATCGAGAATGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACGGGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAGCGTGAATGCCGAGTTAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCCGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTG</genome_strand>
        <mrna_strand>TGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAG......................................................................................................................................................................................................................................................................................TTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTGGAAATTGGTTCATATCGAGAATGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACGGGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAGCGTGAATGCCGAGTTAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCCGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E585567" ref_strand="+" ref_description="SGN-E585567 [68028]">
      <seq>caagaacttgatgaggctttacagagggagatccaagctgcgttccgaactgatgagatccgaagaactcctcctactccacaagatgaaatgagagctggaatgagctatttccatgaaacaatttggaagggtgtaccaaagtttctgcgccgtgttgatacagctcttaaaaacatagggattaatgaacgagttccttataatgctcctcttattcaattctcctcttggatgggcggtgatcgtgatggtaatccaagagtgactcctgaggtcacaagagatgtttgcttattggccagaatgatggcagctaacttgtactattcgcaaatagaggacctcatgtttgagttatctatgtggcgctgcaatgaagaacttcgtgtgcgagcagatgatctccaaaggtcttcaaggagagatgaaaaacactacatagaattttggaagcaagttcctccaaatgaaccctatcgtgtaattcttggtgatgtgagagataagttgtatcagacacgtgagcgtgctcgccaactgttaggccatggatactctgaaattccagaggaagcaacttatactaatattgagcagttcttggagcctcttgagctctgctacagatctctttgtgcttgtggtgacctctccatcgcggatggtagccttctggatttcctgagacaagtttctacgttttggactttcacttgtgagacttgacataagacaagagtcggaccggcatactgatgtgcttgacgctattacgcaacatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="98396" stop="96307"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98092" g_stop="97870" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="253" r_length="223" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97673" g_stop="97570" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="357" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="97466" g_stop="97379" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="445" r_length="88" r_score="0.955"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153">
            <donor d_prob="0.956" d_score="0.96"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97225" g_stop="97071" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="446" r_stop="600" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97070" i_stop="96793" i_length="278">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.760" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96792" g_stop="96607" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="601" r_stop="787" r_length="187" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E585567" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>756</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E585567" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98092" e_stop="97870"/>
          <exon e_start="97673" e_stop="97570"/>
          <exon e_start="97466" e_stop="97379"/>
          <exon e_start="97225" e_stop="97071"/>
          <exon e_start="96792" e_stop="96607"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATGGTATGATTCCTTAACTGTAGAGAATGTTTGCAGTTACTTTAGCTAAAAGCTGAGAAAACAAAATAGGAATTCGGATTACATAATTTTGAAGGGGTGGAGGAAACCAAAGTACTCCTTCTGCTTGAACGTGGATTACTTAGTTACTACATGCAGTAGATAGTCCTTATTTACCTGTCAACTCTGCTACAAAATACAGGTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAGGTATCCAACAATTAAATGTTTTTGACAATTTTGTCTCGATTCATTTAGTGAAAGAAATCAGACTATCTACACTGATCTTTTTCTAAATTGTACAATTTTTCAGTTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCAGATAAACTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAGGTAACTAATTGAATATTGCTATTGAGGTTGATCCATGAAATTGAATCAAAGAAGAGTTTGGTAGTTGAATATAACCTTGATAGGACTGTTAAAGAATCTTTGGACAGAGAAATCCCATAATCTGTGATCTTATAACGTTTTCTTCTCATGCAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAGGTTCATAATACTATACTTCTGTCTTTTCCTGTGACTGCTTTCTATATGTAGAGCCTCCTAAATTAAGCAGTGAACATTCACTTGTACTCTTTACTAGTCTTACTAAACAACTTGACATGTTATTCATCGAAAAAAGGAACTAGAAAAACATGAGCAAGTGTGTCTGTTTCTTGTTGAATAACAGCATAAGCATTTGCATGGTTGTTCTATTAAACCGAAATTTATAAATATCTGTGTTGCATGTCATATAATACTAATATGGTCATCATTTTATGTAGTTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACG-TTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTG</genome_strand>
        <mrna_strand>ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTACCAAAGTTTCTGCGCCGTGTTGATACAGCTCTTAAAAACATAGGGATTAATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATG....................................................................................................................................................................................................GTAATCCAAGAGTGACTCCTGAGGTCACAAGAGATGTTTGCTTATTGGCCAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAG.......................................................................................................TTATCTATGTGGCGCTGCAATGAAGAACTTCGTGTGCGAGCAGATGATCTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAG.........................................................................................................................................................AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGTGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAG......................................................................................................................................................................................................................................................................................TTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGACCTCTCCATCGCGGATGGTAGCCTTCTGGATTTCCTGAGACAAGTTTCTACGTTTTGGACTTTCACTTGTGAGACTTGACATAAGACAAGAGTCGGACCGGCATACTGATGTGCTTGACGCTATTACGCAACATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E288272" ref_strand="+" ref_description="SGN-E288272 [cLES-16-D23]">
      <seq>ggatgggcggtgatcgtgatggtaatccaagagtgactcccgaggtcacaagagatgtttgcttattggcaagaatgatggcagctaacttgtactattcgcaaatagaggacctcatgtatgagttatctatgtggcgctgcagtgaagagcttattgtgcgagcagataaactccaaaggtcttcatggagagatgaaaaacactacatataattttggaagcaagttcctccaaatgaaccctatcgtgtaattcttggtgatgtgacagataagttgtatcagacacgcgagcgtgctcgccgactgtgaggccgtggatactctgaaattccagaggaagcaacttgtactaatattgagcagttcttggagcctcttgagctctgctacagatctctttgtgcttgtggagatctctccatagcggatggtagccttctggatttccttagacaagtttctacgtgtggactttcactagtgagacttgccatatgaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="98190" stop="96356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97890" g_stop="97870" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196">
            <donor d_prob="0.944" d_score="0.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97673" g_stop="97570" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="125" r_length="104" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103">
            <donor d_prob="0.970" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="97466" g_stop="97379" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="213" r_length="88" r_score="0.955"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153">
            <donor d_prob="0.956" d_score="0.96"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97225" g_stop="97071" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="368" r_length="155" r_score="0.968"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97070" i_stop="96793" i_length="278">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.760" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96792" g_stop="96656" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="505" r_length="137" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E288272" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E288272" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97890" e_stop="97870"/>
          <exon e_start="97673" e_stop="97570"/>
          <exon e_start="97466" e_stop="97379"/>
          <exon e_start="97225" e_stop="97071"/>
          <exon e_start="96792" e_stop="96656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATGGGCGGTGATCGTGATGGTATGATTCCTTAACTGTAGAGAATGTTTGCAGTTACTTTAGCTAAAAGCTGAGAAAACAAAATAGGAATTCGGATTACATAATTTTGAAGGGGTGGAGGAAACCAAAGTACTCCTTCTGCTTGAACGTGGATTACTTAGTTACTACATGCAGTAGATAGTCCTTATTTACCTGTCAACTCTGCTACAAAATACAGGTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAGGTATCCAACAATTAAATGTTTTTGACAATTTTGTCTCGATTCATTTAGTGAAAGAAATCAGACTATCTACACTGATCTTTTTCTAAATTGTACAATTTTTCAGTTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCAGATAAACTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAGGTAACTAATTGAATATTGCTATTGAGGTTGATCCATGAAATTGAATCAAAGAAGAGTTTGGTAGTTGAATATAACCTTGATAGGACTGTTAAAGAATCTTTGGACAGAGAAATCCCATAATCTGTGATCTTATAACGTTTTCTTCTCATGCAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAGGTTCATAATACTATACTTCTGTCTTTTCCTGTGACTGCTTTCTATATGTAGAGCCTCCTAAATTAAGCAGTGAACATTCACTTGTACTCTTTACTAGTCTTACTAAACAACTTGACATGTTATTCATCGAAAAAAGGAACTAGAAAAACATGAGCAAGTGTGTCTGTTTCTTGTTGAATAACAGCATAAGCATTTGCATGGTTGTTCTATTAAACCGAAATTTATAAATATCTGTGTTGCATGTCATATAATACTAATATGGTCATCATTTTATGTAGTTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACA</genome_strand>
        <mrna_strand>GGATGGGCGGTGATCGTGATG....................................................................................................................................................................................................GTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTATGAG.......................................................................................................TTATCTATGTGGCGCTGCAGTGAAGAGCTTATTGTGCGAGCAGATAAACTCCAAAGGTCTTCATGGAGAGATGAAAAACACTACATAT.........................................................................................................................................................AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGACAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCGACTGTGAGGCCGTGGATACTCTGAAATTCCAGAGGAAGCAACTTGTACTAATATTGAGCAG......................................................................................................................................................................................................................................................................................TTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGAGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTGTGGACTTTCACTAGTGAGACTTGCCATATGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E562115" ref_strand="+" ref_description="SGN-E562115 [555]">
      <seq>acatcacacccgatgataaacaagaacttgatgaggctttacagagggagatccaagctgcgttccgaactgatgagatccgaagaactcctcctactccacaagatgaaatgagagctggaatgagctatttccatgaaacaatttggaagggtgtaccaaagtttctgcgccgtgttgatacagctcttaaaaacatagggattaatgaacgagttccttataatgctcctcttattcaattctcctcttggatgggcggtgatcgtgatggtaatccaagagtgactcctgaggtcacaagagatgtttgcttattggccagaatgatggcagctaacttgtactattcgcaaatagaggacctcatgtttgagttatctatgtggcgctgcaatgaagaacttcgtgtgcgagcagatgatctccaaaggtcttcaaggagagatgaaaaacactacatagaattttggaagcaagttcctccaaatgaaccctatcgcgtaattcttggtgatgtgagagataaggtgtatcagacacgtgagcgtgctcgccaactggttaggccatggatactctgaaattccagaggaagcaatttatactaatattgagcagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="98876" stop="96767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98576" g_stop="98527" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98526" i_stop="98093" i_length="434">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98092" g_stop="97870" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="273" r_length="223" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196">
            <donor d_prob="0.944" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="97673" g_stop="97570" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="377" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97466" g_stop="97379" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="465" r_length="88" r_score="0.955"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153">
            <donor d_prob="0.956" d_score="0.96"/>
            <acceptor a_prob="0.863" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97225" g_stop="97071" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="621" r_length="156" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E562115" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>620</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E562115" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98576" e_stop="98527"/>
          <exon e_start="98092" e_stop="97870"/>
          <exon e_start="97673" e_stop="97570"/>
          <exon e_start="97466" e_stop="97379"/>
          <exon e_start="97225" e_stop="97071"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACATTACACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAGGTAACTATTGACGTTTAGTTAGTTGATTCATGTGTTTTCCTTGAATGAAATTCTATTATTAGTACCTTCAATTCCGATGTCTTTCTAACTCTACTAATCGATATTTTTGTGCTTCAATGTCATATAGATATGTCTTGATCTAGCAGGCTTTGTATTAATGTAGTTTTACTTTCTAAACTTGATGGATATGACATATCCATGGACTTAATTTTTGCATCCATCTCGTGAAGATTGGAGAAGCAAAAATTATCTCATAAGTTACCCATTGAATATTTGTCCCTTCATTCATCTGAATCGTATTTTACCCTGTAAAGAGTGCAGCTAGTTATATGATTACTCTAAAATTGTAATAAGGAATCTTCAAAATCAAATATGTGTCGCATTCTATGGATCTTTCTTTTTTGATAAAAATCTGCTACTTACTTCCTCTGTAGATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATGGTATGATTCCTTAACTGTAGAGAATGTTTGCAGTTACTTTAGCTAAAAGCTGAGAAAACAAAATAGGAATTCGGATTACATAATTTTGAAGGGGTGGAGGAAACCAAAGTACTCCTTCTGCTTGAACGTGGATTACTTAGTTACTACATGCAGTAGATAGTCCTTATTTACCTGTCAACTCTGCTACAAAATACAGGTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAGGTATCCAACAATTAAATGTTTTTGACAATTTTGTCTCGATTCATTTAGTGAAAGAAATCAGACTATCTACACTGATCTTTTTCTAAATTGTACAATTTTTCAGTTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCAGATAAACTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAGGTAACTAATTGAATATTGCTATTGAGGTTGATCCATGAAATTGAATCAAAGAAGAGTTTGGTAGTTGAATATAACCTTGATAGGACTGTTAAAGAATCTTTGGACAGAGAAATCCCATAATCTGTGATCTTATAACGTTTTCTTCTCATGCAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACT-GTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAG</genome_strand>
        <mrna_strand>ACATCACACCCGATGATAAACAAGAACTTGATGAGGCTTTACAGAGGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTACCAAAGTTTCTGCGCCGTGTTGATACAGCTCTTAAAAACATAGGGATTAATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATG....................................................................................................................................................................................................GTAATCCAAGAGTGACTCCTGAGGTCACAAGAGATGTTTGCTTATTGGCCAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAG.......................................................................................................TTATCTATGTGGCGCTGCAATGAAGAACTTCGTGTGCGAGCAGATGATCTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAG.........................................................................................................................................................AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGCGTAATTCTTGGTGATGTGAGAGATAAGGTGTATCAGACACGTGAGCGTGCTCGCCAACTGGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAATTTATACTAATATTGAGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E591085" ref_strand="+" ref_description="SGN-E591085 [44790]">
      <seq>acccgatgataaacaagaacttgatgaggctttacagagggagatccaagctgcgttccgaactgatgagatccgaagaactcctcctactccacaagatgaaatgagagctggaatgagctatttccatgaaacaatttggaagggtgtaccaaagtttctgcgccgtgttgatacagctcttaaaaacatagggattaatgaacgagttccttataatgctcctcttattcagttctcctcttggatgggcggtgatcgtgatggtaatccaagagtgactcctgaggtcacaagagatgtttgcttattggccagaatgatggcagctaacttgtactattcgcaaatagaggacctcatgtttgagttatctatgtggcgctgcaatgaagagcttcgtgtgcgagcagatgatctccaaaggtcttcaaggagagatgaaaaacactacatagaattttggaagcaagttcctccaaatgaaccctatcgtgtaattcttggtgatgtgagagattagttgtatcagaaacgcgagcgtgctcgccaactgttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="98869" stop="96824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98569" g_stop="98527" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98526" i_stop="98093" i_length="434">
            <donor d_prob="0.997" d_score="0.95"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98092" g_stop="97870" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="266" r_length="223" r_score="0.982"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196">
            <donor d_prob="0.944" d_score="0.98"/>
            <acceptor a_prob="0.890" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="97673" g_stop="97570" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="370" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97466" g_stop="97379" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="371" r_stop="458" r_length="88" r_score="0.966"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153">
            <donor d_prob="0.956" d_score="0.96"/>
            <acceptor a_prob="0.863" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97225" g_stop="97124" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="459" r_stop="560" r_length="102" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E591085" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E591085" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98569" e_stop="98527"/>
          <exon e_start="98092" e_stop="97870"/>
          <exon e_start="97673" e_stop="97570"/>
          <exon e_start="97466" e_stop="97379"/>
          <exon e_start="97225" e_stop="97124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAGGTAACTATTGACGTTTAGTTAGTTGATTCATGTGTTTTCCTTGAATGAAATTCTATTATTAGTACCTTCAATTCCGATGTCTTTCTAACTCTACTAATCGATATTTTTGTGCTTCAATGTCATATAGATATGTCTTGATCTAGCAGGCTTTGTATTAATGTAGTTTTACTTTCTAAACTTGATGGATATGACATATCCATGGACTTAATTTTTGCATCCATCTCGTGAAGATTGGAGAAGCAAAAATTATCTCATAAGTTACCCATTGAATATTTGTCCCTTCATTCATCTGAATCGTATTTTACCCTGTAAAGAGTGCAGCTAGTTATATGATTACTCTAAAATTGTAATAAGGAATCTTCAAAATCAAATATGTGTCGCATTCTATGGATCTTTCTTTTTTGATAAAAATCTGCTACTTACTTCCTCTGTAGATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATGGTATGATTCCTTAACTGTAGAGAATGTTTGCAGTTACTTTAGCTAAAAGCTGAGAAAACAAAATAGGAATTCGGATTACATAATTTTGAAGGGGTGGAGGAAACCAAAGTACTCCTTCTGCTTGAACGTGGATTACTTAGTTACTACATGCAGTAGATAGTCCTTATTTACCTGTCAACTCTGCTACAAAATACAGGTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAGGTATCCAACAATTAAATGTTTTTGACAATTTTGTCTCGATTCATTTAGTGAAAGAAATCAGACTATCTACACTGATCTTTTTCTAAATTGTACAATTTTTCAGTTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCAGATAAACTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAGGTAACTAATTGAATATTGCTATTGAGGTTGATCCATGAAATTGAATCAAAGAAGAGTTTGGTAGTTGAATATAACCTTGATAGGACTGTTAAAGAATCTTTGGACAGAGAAATCCCATAATCTGTGATCTTATAACGTTTTCTTCTCATGCAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTGTTAG</genome_strand>
        <mrna_strand>ACCCGATGATAAACAAGAACTTGATGAGGCTTTACAGAGGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTACCAAAGTTTCTGCGCCGTGTTGATACAGCTCTTAAAAACATAGGGATTAATGAACGAGTTCCTTATAATGCTCCTCTTATTCAGTTCTCCTCTTGGATGGGCGGTGATCGTGATG....................................................................................................................................................................................................GTAATCCAAGAGTGACTCCTGAGGTCACAAGAGATGTTTGCTTATTGGCCAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAG.......................................................................................................TTATCTATGTGGCGCTGCAATGAAGAGCTTCGTGTGCGAGCAGATGATCTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAG.........................................................................................................................................................AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATTAGTTGTATCAGAAACGCGAGCGTGCTCGCCAACTGTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E557529" ref_strand="+" ref_description="SGN-E557529 [16343]">
      <seq>gtggatctggtcctaacagctcatcctacacaatctgtacgaagatcattgcttcaaaagcatggaaggatccgtgactgcttggctcagttgtatgctaaagacattacacccgatgataaacaagaacttgatgaggctttacagagggagatccaagctgcgttccgaactgatgagatccgaagaactcctcctactccacaagatgaaatgagagctggaatgagctatttccatgaaacaatttggaagggtgtaccaaagtttctgcgccgtgttgatacagctcttaaaaacatagggattaatgaacgagttccttataatgctcctcttattcagttctcctcttggatgggcggtgatcgtgatggtaatccaagagtgactcctgaggtcacaagagatgtttgcttattggccagaatgatggcagctaacttgtactattcgcaaatagaggacctcatgtttgagttatctatgtggcgctgcaatgaagagcttcgtgtgcgagcaggatgatctccaaaaggtcttcaagggagagatgaaaaacactacatagaattttggaagcaagttcctccaaatgaaccctatcgtgtaatccttggtgatgtgaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="99155" stop="96869"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98855" g_stop="98788" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98787" i_stop="98612" i_length="176">
            <donor d_prob="0.923" d_score="0.96"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98611" g_stop="98527" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="153" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98526" i_stop="98093" i_length="434">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98092" g_stop="97870" g_length="223"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="376" r_length="223" r_score="0.982"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196">
            <donor d_prob="0.944" d_score="0.98"/>
            <acceptor a_prob="0.890" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97673" g_stop="97570" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="480" r_length="104" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="97466" g_stop="97379" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="571" r_length="91" r_score="0.898"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153">
            <donor d_prob="0.956" d_score="0.83"/>
            <acceptor a_prob="0.863" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="97225" g_stop="97169" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="572" r_stop="628" r_length="57" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E557529" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>625</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E557529" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98855" e_stop="98788"/>
          <exon e_start="98611" e_stop="98527"/>
          <exon e_start="98092" e_stop="97870"/>
          <exon e_start="97673" e_stop="97570"/>
          <exon e_start="97466" e_stop="97379"/>
          <exon e_start="97225" e_stop="97169"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGATTTGGTCCTAACAGCTCATCCTACTCAATCTGTACGAAGATCATTGCTTCAAAAGCATGGCAGGTTTGGTCTTTAATCACAATGTTTATTGTCTTCAGCAGTTCGAGTTGTCTCCTTGGCTTGTCATTTTATGTTAGTTTATGCTTCGATATTTTCCCTAATAAATATAAAGGGGAAATGCTCTTTTCGGACCAAATTTCGTGCTTTCATCGGTTGTTTACTAACTTGTTCTAACTCAGGATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAGGTAACTATTGACGTTTAGTTAGTTGATTCATGTGTTTTCCTTGAATGAAATTCTATTATTAGTACCTTCAATTCCGATGTCTTTCTAACTCTACTAATCGATATTTTTGTGCTTCAATGTCATATAGATATGTCTTGATCTAGCAGGCTTTGTATTAATGTAGTTTTACTTTCTAAACTTGATGGATATGACATATCCATGGACTTAATTTTTGCATCCATCTCGTGAAGATTGGAGAAGCAAAAATTATCTCATAAGTTACCCATTGAATATTTGTCCCTTCATTCATCTGAATCGTATTTTACCCTGTAAAGAGTGCAGCTAGTTATATGATTACTCTAAAATTGTAATAAGGAATCTTCAAAATCAAATATGTGTCGCATTCTATGGATCTTTCTTTTTTGATAAAAATCTGCTACTTACTTCCTCTGTAGATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATGGTATGATTCCTTAACTGTAGAGAATGTTTGCAGTTACTTTAGCTAAAAGCTGAGAAAACAAAATAGGAATTCGGATTACATAATTTTGAAGGGGTGGAGGAAACCAAAGTACTCCTTCTGCTTGAACGTGGATTACTTAGTTACTACATGCAGTAGATAGTCCTTATTTACCTGTCAACTCTGCTACAAAATACAGGTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAGGTATCCAACAATTAAATGTTTTTGACAATTTTGTCTCGATTCATTTAGTGAAAGAAATCAGACTATCTACACTGATCTTTTTCTAAATTGTACAATTTTTCAGTTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCA-GATAAACTCC-AAAGGTCTTCAA-GGAGAGATGAAAAACACTACATAGGTAACTAATTGAATATTGCTATTGAGGTTGATCCATGAAATTGAATCAAAGAAGAGTTTGGTAGTTGAATATAACCTTGATAGGACTGTTAAAGAATCTTTGGACAGAGAAATCCCATAATCTGTGATCTTATAACGTTTTCTTCTCATGCAGAATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGA</genome_strand>
        <mrna_strand>GTGGATCTGGTCCTAACAGCTCATCCTACACAATCTGTACGAAGATCATTGCTTCAAAAGCATGGAAG................................................................................................................................................................................GATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGATGAGGCTTTACAGAGGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTACCAAAGTTTCTGCGCCGTGTTGATACAGCTCTTAAAAACATAGGGATTAATGAACGAGTTCCTTATAATGCTCCTCTTATTCAGTTCTCCTCTTGGATGGGCGGTGATCGTGATG....................................................................................................................................................................................................GTAATCCAAGAGTGACTCCTGAGGTCACAAGAGATGTTTGCTTATTGGCCAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAG.......................................................................................................TTATCTATGTGGCGCTGCAATGAAGAGCTTCGTGTGCGAGCAGGATGATCTCCAAAAGGTCTTCAAGGGAGAGATGAAAAACACTACATAG.........................................................................................................................................................AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATCCTTGGTGATGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E569328" ref_strand="+" ref_description="SGN-E569328 [13750]">
      <seq>attcaattgttattgctaaagctttctctcacatgcttaacttggccaatttggctgaggaggttcagattgcctaccgtaggcgccaaaaattgaagaaaaagggagattttggggatgagagcaatgcaacaactgagtcagatattgaagaaactttcaagaaattggtgggggacttgaagaagtcccctcaagaagtttttgatgctatcaagaatcagactgtggatctggtcctaacagctcatcctacacaatctgtacgaagatcattgcttcaaaagcatggaaggatccgtgactgcttggctcagttgtatgctaaagacattacacccgatgataaacaagaacttgatgaggctttacagagggagatccaagctgcgttccgaactgatgagatccgaagaactcctcctactccacaagatgaaatgagagctggaatgagctatttccatgaaacaatttggaagggtgtaccaaagtttctgcgccgtgttgatacagctcttaaaaacatagggattaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="99382" stop="97634"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99082" g_stop="98788" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="295" r_length="295" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98787" i_stop="98612" i_length="176">
            <donor d_prob="0.923" d_score="0.96"/>
            <acceptor a_prob="0.911" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="98611" g_stop="98527" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="380" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98526" i_stop="98093" i_length="434">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="98092" g_stop="97934" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="539" r_length="159" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E569328" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E569328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99082" e_stop="98788"/>
          <exon e_start="98611" e_stop="98527"/>
          <exon e_start="98092" e_stop="97934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAATTGTTATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCAGATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAAGGAGATTTCGGGGATGAGAGTAATGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAACTGGTGGGGGACTTAAAGAAGTCCCCCCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATTTGGTCCTAACAGCTCATCCTACTCAATCTGTACGAAGATCATTGCTTCAAAAGCATGGCAGGTTTGGTCTTTAATCACAATGTTTATTGTCTTCAGCAGTTCGAGTTGTCTCCTTGGCTTGTCATTTTATGTTAGTTTATGCTTCGATATTTTCCCTAATAAATATAAAGGGGAAATGCTCTTTTCGGACCAAATTTCGTGCTTTCATCGGTTGTTTACTAACTTGTTCTAACTCAGGATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAGGTAACTATTGACGTTTAGTTAGTTGATTCATGTGTTTTCCTTGAATGAAATTCTATTATTAGTACCTTCAATTCCGATGTCTTTCTAACTCTACTAATCGATATTTTTGTGCTTCAATGTCATATAGATATGTCTTGATCTAGCAGGCTTTGTATTAATGTAGTTTTACTTTCTAAACTTGATGGATATGACATATCCATGGACTTAATTTTTGCATCCATCTCGTGAAGATTGGAGAAGCAAAAATTATCTCATAAGTTACCCATTGAATATTTGTCCCTTCATTCATCTGAATCGTATTTTACCCTGTAAAGAGTGCAGCTAGTTATATGATTACTCTAAAATTGTAATAAGGAATCTTCAAAATCAAATATGTGTCGCATTCTATGGATCTTTCTTTTTTGATAAAAATCTGCTACTTACTTCCTCTGTAGATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGAT</genome_strand>
        <mrna_strand>ATTCAATTGTTATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCAGATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAGGGAGATTTTGGGGATGAGAGCAATGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAATTGGTGGGGGACTTGAAGAAGTCCCCTCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATCTGGTCCTAACAGCTCATCCTACACAATCTGTACGAAGATCATTGCTTCAAAAGCATGGAAG................................................................................................................................................................................GATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGATGAGGCTTTACAGAGGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTACCAAAGTTTCTGCGCCGTGTTGATACAGCTCTTAAAAACATAGGGATTAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E393076" ref_strand="+" ref_description="SGN-E393076 [TUS-37-J4]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaataaaaacagaatttatttttttttgtgtatatagcgagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="102242" stop="101347"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101942" g_stop="101621" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E393076" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101942" e_stop="101621"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATTTATGTATATTGCATAATTATAAGTGTATAGCAAGAAAATATATG-TTTT-TCTCGCTTTATTCAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGA-AAAATTGTATTTCACTGCAATTGTATAATTCACAATCGTATAATTCTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAAATTATACACTTCTGTGTATAAAGCGAGAGAG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAAAAACAGAATTTATTTTTTTTTGTGTATATAGCGAGATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E393075" ref_strand="+" ref_description="SGN-E393075 [TUS-37-J2]">
      <seq>taaaatgtatgtatattgcataattataagtgtatggcaagaatatatatgtttttgtctcgctttatacaaaaacaaaaacacaatatatacacttctgttgtataaagttagagaaaattgtatttcactgcaattatataattcacaattgtataattcgttggcctttttctctgcaatatttgaagtaaaatgtttgtaatttgtataattaagtgtataacacgaagatatatatttttacatgtgtatatacaattttctctcgctttatacaaaatagaaacagaggttttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="102242" stop="101347"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101942" g_stop="101638" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="308" r_length="308" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E393075" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>305</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101942" e_stop="101638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAATTTATGTATATTGCATAATTATAAGTGTATAGCAAGAAAATATATG-TTTT-TCTCGCTTTATTCAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGA-AAAATTGTATTTCACTGCAATTGTATAATTCACAATCGTATAATTCTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAAATTATACACTTCTG</genome_strand>
        <mrna_strand>TAAAATGTATGTATATTGCATAATTATAAGTGTATGGCAAGAATATATATGTTTTTGTCTCGCTTTATACAAAAACAAAAACACAATATATACACTTCTGTTGTATAAAGTTAGAGAAAATTGTATTTCACTGCAATTATATAATTCACAATTGTATAATTCGTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAATTTGTATAATTAAGTGTATAACACGAAGATATATATTTTTACATGTGTATATACAATTTTCTCTCGCTTTATACAAAATAGAAACAGAGGTTTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E553991" ref_strand="+" ref_description="SGN-E553991 [cTSC-2-N7]">
      <seq>aattaaatctcaagcttgaaatgatcataacttgctatttataatttctttaccaagcatattatatattgtcaacctaggttgcacaattaaaatattttgataccttactatgatgtcaaatgatcaaataataatcgaaggcgaaggaggaggaggaggaggagaaggatcatcatcgagatccaaaaccactatacttatagcaccatctgacgatcatcatcatcatcatcagctaccaccagtaccacctcaactgagtagatatgagtctcagaaacgtcgcgattggaatacttttggacaatacttgaaaaatcaaaggccacctgttcctttatcccagtgtaactataaccacgtgctagagtttctccgatacctagatcaatttggaaaaactaaggtacatttacatggttgccctttttttggtcaaccagagcctccagggccttgtacttgtcctcttagacaagcatggggaagtcttgatgcacttattggtaggcttagagctgcctatgaagaaaatggtggcttacctgagaataatccattcgcgagtggagctatacgcgtttatcttagagaggtaagagattttcaagctaaagcaagaggaatttgttataagaagaagaagaagaagaggaaaatgcaaaacaaacctacttctagtaatgctcatgagccaactacaactacctttcaattccaatcttcttgaatttctatgaaggaacaaagcaaaaggtaaaaaaaataaaaaaaataaaaattgctatgtttttttaataataagaggattatttgctttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="111752" stop="110328"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111452" g_stop="110628" g_length="825"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="825" r_length="825" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E553991" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>825</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E553991" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111452" e_stop="110628"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTAAATCTCAAGCTTGAAATGATCATAACTTGCTATTTATAATTTCTTTACCAAGCATATTATATATTGTCAACCTAGGTTGCACAATTAAAATATTTTGATACCTTACTATGATGTCAAATGATCAAATAATAATCGAAGGCGAAGGAGGAGGAGGAGGAGGAGAAGGATCATCATCGAGATCCAAAACCACTATACTTATAGCACCATCTGACGATCATCATCATCATCATCAGCTACCACCAGTACCACCTCAACTGAGTAGATATGAGTCTCAGAAACGTCGCGATTGGAATACTTTTGGACAATACTTGAAAAATCAAAGGCCACCTGTTCCTTTATCCCAGTGTAACTATAACCACGTGCTAGAGTTTCTCCGATACCTAGATCAATTTGGAAAAACTAAGGTACATTTACATGGTTGCCCTTTTTTTGGTCAACCAGAGCCTCCAGGGCCTTGTACTTGTCCTCTTAGACAAGCATGGGGAAGTCTTGATGCACTTATTGGTAGGCTTAGAGCTGCCTATGAAGAAAATGGTGGCTTACCTGAGAATAATCCATTCGCGAGTGGAGCTATACGCGTTTATCTTAGAGAGGTAAGAGATTTTCAAGCTAAAGCAAGAGGAATTTGTTATAAGAAGAAGAAGAAGAAGAGGAAAATGCAAAACAAACCTACTTCTAGTAATGCTCATGAGCCAACTACAACTACCTTTCAATTCCAATCTTCTTGAATTTCTATGAAGGAACAAAGCAAAAGGTAAAAAAAATAAAAAAAATAAAAATTGCTATGTTTTTTTAATAATAAGAGGATTATTTGCTTTGT</genome_strand>
        <mrna_strand>AATTAAATCTCAAGCTTGAAATGATCATAACTTGCTATTTATAATTTCTTTACCAAGCATATTATATATTGTCAACCTAGGTTGCACAATTAAAATATTTTGATACCTTACTATGATGTCAAATGATCAAATAATAATCGAAGGCGAAGGAGGAGGAGGAGGAGGAGAAGGATCATCATCGAGATCCAAAACCACTATACTTATAGCACCATCTGACGATCATCATCATCATCATCAGCTACCACCAGTACCACCTCAACTGAGTAGATATGAGTCTCAGAAACGTCGCGATTGGAATACTTTTGGACAATACTTGAAAAATCAAAGGCCACCTGTTCCTTTATCCCAGTGTAACTATAACCACGTGCTAGAGTTTCTCCGATACCTAGATCAATTTGGAAAAACTAAGGTACATTTACATGGTTGCCCTTTTTTTGGTCAACCAGAGCCTCCAGGGCCTTGTACTTGTCCTCTTAGACAAGCATGGGGAAGTCTTGATGCACTTATTGGTAGGCTTAGAGCTGCCTATGAAGAAAATGGTGGCTTACCTGAGAATAATCCATTCGCGAGTGGAGCTATACGCGTTTATCTTAGAGAGGTAAGAGATTTTCAAGCTAAAGCAAGAGGAATTTGTTATAAGAAGAAGAAGAAGAAGAGGAAAATGCAAAACAAACCTACTTCTAGTAATGCTCATGAGCCAACTACAACTACCTTTCAATTCCAATCTTCTTGAATTTCTATGAAGGAACAAAGCAAAAGGTAAAAAAAATAAAAAAAATAAAAATTGCTATGTTTTTTTAATAATAAGAGGATTATTTGCTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E722354" ref_strand="+" ref_description="SGN-E722354 [FC17AA12]">
      <seq>gggcgattggcggccaatcggccgaattgataattctactcacttcttttaatttctttctaataaatcaacaatatttaattaaatctcaagcttgaaatgatcataacttgctatttataatttctttaccaagcatattatatattgtcaacctaggttgcacaattaaaatattttgataccttactatgatgtcaaatgatcaaataataatcgaaggcgaaggaggaggaggaggaggagaaggatcatcatcgagatccaaaaccactatacttatagcaccatctgacgatcatcatcatcatcatcagctaccaccagtaccacctcaactgagtagatatgagtctcaaaaacgtcgcgattggaatacttttggacaatacttgaaaaatcaaaggccacctgttcctttatcccagtgtaactataaccacgtgctagagtttctccgatacctagatcaatttggaaaaactaaggtacatttacatggttgccctttttttggtcaaccaaagcctccagggccttgtacttgtcctcttagacaagcatggggaagtcttgatgcacttattggtaggcttagagctgcctatgaagaaaatggtggcttacctgagaataatccattcgcgagtggagctatacgcgtttatcttagagaggtaagagattttcaagctaaagcaagaggaatttgttataagaagaagaagaagaagaggaaaatgcaaaacaaacctacttctagtaatgctcatgagccaactacaactacctttcaattccaatcttcttgaatttctatgaaggaacaaagcaaaaggtaaaaaaaataaaaaaaataaaaattgctatgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="111807" stop="110359"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111503" g_stop="110659" g_length="845"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="873" r_length="844" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E722354" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="0.968" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E722354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111503" e_stop="110659"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATTCTACTCACTTTTTCTTCTTTCTTTCATAATAAATCAACAATATTTAATTAAATCTCAAGCTTGAAATGATCATAACTTGCTATTTATAATTTCTTTACCAAGCATATTATATATTGTCAACCTAGGTTGCACAATTAAAATATTTTGATACCTTACTATGATGTCAAATGATCAAATAATAATCGAAGGCGAAGGAGGAGGAGGAGGAGGAGAAGGATCATCATCGAGATCCAAAACCACTATACTTATAGCACCATCTGACGATCATCATCATCATCATCAGCTACCACCAGTACCACCTCAACTGAGTAGATATGAGTCTCAGAAACGTCGCGATTGGAATACTTTTGGACAATACTTGAAAAATCAAAGGCCACCTGTTCCTTTATCCCAGTGTAACTATAACCACGTGCTAGAGTTTCTCCGATACCTAGATCAATTTGGAAAAACTAAGGTACATTTACATGGTTGCCCTTTTTTTGGTCAACCAGAGCCTCCAGGGCCTTGTACTTGTCCTCTTAGACAAGCATGGGGAAGTCTTGATGCACTTATTGGTAGGCTTAGAGCTGCCTATGAAGAAAATGGTGGCTTACCTGAGAATAATCCATTCGCGAGTGGAGCTATACGCGTTTATCTTAGAGAGGTAAGAGATTTTCAAGCTAAAGCAAGAGGAATTTGTTATAAGAAGAAGAAGAAGAAGAGGAAAATGCAAAACAAACCTACTTCTAGTAATGCTCATGAGCCAACTACAACTACCTTTCAATTCCAATCTTCTTGAATTTCTATGAAGGAACAAAGCAAAAGGTAAAAAAAATAAAAAAAATAAAAATTGCTATGTT</genome_strand>
        <mrna_strand>ATAATTCTACTCACTTCTTTTAATTTCTTTC-TAATAAATCAACAATATTTAATTAAATCTCAAGCTTGAAATGATCATAACTTGCTATTTATAATTTCTTTACCAAGCATATTATATATTGTCAACCTAGGTTGCACAATTAAAATATTTTGATACCTTACTATGATGTCAAATGATCAAATAATAATCGAAGGCGAAGGAGGAGGAGGAGGAGGAGAAGGATCATCATCGAGATCCAAAACCACTATACTTATAGCACCATCTGACGATCATCATCATCATCATCAGCTACCACCAGTACCACCTCAACTGAGTAGATATGAGTCTCAAAAACGTCGCGATTGGAATACTTTTGGACAATACTTGAAAAATCAAAGGCCACCTGTTCCTTTATCCCAGTGTAACTATAACCACGTGCTAGAGTTTCTCCGATACCTAGATCAATTTGGAAAAACTAAGGTACATTTACATGGTTGCCCTTTTTTTGGTCAACCAAAGCCTCCAGGGCCTTGTACTTGTCCTCTTAGACAAGCATGGGGAAGTCTTGATGCACTTATTGGTAGGCTTAGAGCTGCCTATGAAGAAAATGGTGGCTTACCTGAGAATAATCCATTCGCGAGTGGAGCTATACGCGTTTATCTTAGAGAGGTAAGAGATTTTCAAGCTAAAGCAAGAGGAATTTGTTATAAGAAGAAGAAGAAGAAGAGGAAAATGCAAAACAAACCTACTTCTAGTAATGCTCATGAGCCAACTACAACTACCTTTCAATTCCAATCTTCTTGAATTTCTATGAAGGAACAAAGCAAAAGGTAAAAAAAATAAAAAAAATAAAAATTGCTATGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E608700" ref_strand="+" ref_description="SGN-E608700 [24693]">
      <seq>gatttttaattgtcaacctaggttgcacaatttaatattttgatactatgatgtcaaatgatcaaataataatcgaaggaggaggagaaggatcgtcatcaagatcatcaaccactatacttatagcaccatctgacgatcatcatcatcatcagctaccaccagtaccagtaccgcctcaactgagtcgatatgagtctcagaaacgtcgtgattggaacacttttggacaatacttgaaaaatcaaaggcctcccgttcctttatcccagtgtaactataaccacgtgctagaatttctccgatacctagatcaatttggaaaaactaaggtacatttacatggttgcccttttttcgggcaaccagagcctccaggaccttgtacttgtcctcttagacaagcatggggaagtcttgatgcacttattggtaggcttagagctgcctatgaagaaaatggtggcctaccggagaataatccattcgcgagtggatctatacgcgtttatcttagagaggtaagagattttcaaggctaaagcaagaggaatttcttataagaagaagaagaagaagaggaaaatggaaagaaacctacttctagtaatgtcatgagacaatacaatacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="111694" stop="110439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111393" g_stop="110739" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="634" r_length="634" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E608700" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.033" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E608700" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111393" e_stop="110739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTATATATTGTCAACCTAGGTTGCACAATTAAAATATTTTGATACCTTACTATGATGTCAAATGATCAAATAATAATCGAAGGCGAAGGAGGAGGAGGAGGAGGAGAAGGATCATCATCGAGATCCAAAACCACTATACTTATAGCACCATCTGACGATCATCATCATCATCATCAGCTACC---ACCAGTACCACCTCAACTGAGTAGATATGAGTCTCAGAAACGTCGCGATTGGAATACTTTTGGACAATACTTGAAAAATCAAAGGCCACCTGTTCCTTTATCCCAGTGTAACTATAACCACGTGCTAGAGTTTCTCCGATACCTAGATCAATTTGGAAAAACTAAGGTACATTTACATGGTTGCCCTTTTTTTGGTCAACCAGAGCCTCCAGGGCCTTGTACTTGTCCTCTTAGACAAGCATGGGGAAGTCTTGATGCACTTATTGGTAGGCTTAGAGCTGCCTATGAAGAAAATGGTGGCTTACCTGAGAATAATCCATTCGCGAGTGGAGCTATACGCGTTTATCTTAGAGAGGTAAGAGATTTTCAA-GCTAAAGCAAGAGGAATTTGTTATAAGAAGAAGAAGAAGAAGAGGAAAATGCAAAACAAACCTACTTCTAGTAATGCTCATGAGCCAACTACAACTACCTT</genome_strand>
        <mrna_strand>GATTTTTAATTGTCAACCTAGGTTGCACAATT-TAATATTTTG--A---TACTATGATGTCAAATGATCAAATAATAAT------CG-A--AGGA---GGAGGAG---AAGGATCGTCATCAAGATCATCAACCACTATACTTATAGCACCATCTGACGATCATCATCATCATCAGCTACCACCAGTACCAGTACCGCCTCAACTGAGTCGATATGAGTCTCAGAAACGTCGTGATTGGAACACTTTTGGACAATACTTGAAAAATCAAAGGCCTCCCGTTCCTTTATCCCAGTGTAACTATAACCACGTGCTAGAATTTCTCCGATACCTAGATCAATTTGGAAAAACTAAGGTACATTTACATGGTTGCCCTTTTTTCGGGCAACCAGAGCCTCCAGGACCTTGTACTTGTCCTCTTAGACAAGCATGGGGAAGTCTTGATGCACTTATTGGTAGGCTTAGAGCTGCCTATGAAGAAAATGGTGGCCTACCGGAGAATAATCCATTCGCGAGTGGATCTATACGCGTTTATCTTAGAGAGGTAAGAGATTTTCAAGGCTAAAGCAAGAGGAATTTCTTATAAGAAGAAGAAGAAGAAGAGGAAAATG-GAAAGAAACCTACTTCTAGTAATG-TCATGAGACAA-TACAA-TACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E372441" ref_strand="+" ref_description="SGN-E372441 [TUS-32-K20]">
      <seq>tttttttttcaggtaaattgtaatatcactttaagtataattctcccagggaaaaccactggtgacaattttagtgaagtttaatcttggaatatccagcaacacaaatgcaaggtgatgctattgtttgaaacttgtctcttattgcacaaagtgaaaacccgaacaaacgcaagaaacaaaagaggcaatgcaaaagtattgccttacaatcataattggaaggccgtgacagttgacaacttctttgacagcagtaaacatagaggaactgttatgttgaaggagtggaagacaataaaatggagcaatgtcagacaccatctttaacatcaccaagatgagatgccaaagagacccttcgagcaggaacagattgaaatttgccaaagctgaaaggcaaacgagacaaagtgattctggggcaattatcgctaactttatcataatgtattgtgtaatttgagctgcttatgttcctggagtagcagaatgaatcatccttatatttatagacttgttgggtactcccgatcccactgacaaccaattgcccctttacaagaatatgtccctgtgctttttgcatgttttcagtagagctggctgacgatacgttcttggaagtctttatcctattatcatcaaatcccaacgtaacatttgagattgaggcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="116322" stop="117592"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116615" g_stop="117292" g_length="678"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="678" r_length="678" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E372441" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116615" e_stop="117292"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTGATTCAGGTAAATTGTAATATCACTTTAAGTATAATTCTCCCAGGGAAAACCACTGGTGACAATTTTAGTGAAGTTTAATCTTGGAATATCCAGCAACACAAATGCAAGGTGATGCTATTGTTTGAAACTTGTCTCTTATTGCACAAAGTGAAAACCCGAACAAACGCAAGAAACAAAAGAGGCAATGCAGAAGTATTGCCTTACAATCATAATTGGAAGGCCGTGACAGTTGACAACTTCTTTGACAGCAGTAAACATAGAGGAACTGTTATGTTGAAGGAGTGGAAGACAATAAAATGGAGCAATGTCAGACACCATCTTTAACATCACCAAGATGAGATGCCAAAGAGACCCTTCGAGCAGGAACAGATTGAAATTTGCCAAAGCTGAAAGGCAAACGAGACAAAGTGATTCTGGGGCAATTATCGCTAACTTTATCATAATGTATTGTGTAATTTGAGCTGCTTATGTTCCTGGAGTAGCAGAATGAATCATCCTTATATTTATAGACTTGTTGGGTACTCCCGATCCCACTGACAACCAATTGCCCCTTTACAAGAATATGTCCCTGTGCTTTTTGCATGTTTTCAGTAGAGCTGGCTGACGATACGTTCTTGGAAGTCTTTATCCTATTATCATCAAATCCCAACGTAACATTTGAGATTGAGGCAT</genome_strand>
        <mrna_strand>TTTTTTTTTCAGGTAAATTGTAATATCACTTTAAGTATAATTCTCCCAGGGAAAACCACTGGTGACAATTTTAGTGAAGTTTAATCTTGGAATATCCAGCAACACAAATGCAAGGTGATGCTATTGTTTGAAACTTGTCTCTTATTGCACAAAGTGAAAACCCGAACAAACGCAAGAAACAAAAGAGGCAATGCAAAAGTATTGCCTTACAATCATAATTGGAAGGCCGTGACAGTTGACAACTTCTTTGACAGCAGTAAACATAGAGGAACTGTTATGTTGAAGGAGTGGAAGACAATAAAATGGAGCAATGTCAGACACCATCTTTAACATCACCAAGATGAGATGCCAAAGAGACCCTTCGAGCAGGAACAGATTGAAATTTGCCAAAGCTGAAAGGCAAACGAGACAAAGTGATTCTGGGGCAATTATCGCTAACTTTATCATAATGTATTGTGTAATTTGAGCTGCTTATGTTCCTGGAGTAGCAGAATGAATCATCCTTATATTTATAGACTTGTTGGGTACTCCCGATCCCACTGACAACCAATTGCCCCTTTACAAGAATATGTCCCTGTGCTTTTTGCATGTTTTCAGTAGAGCTGGCTGACGATACGTTCTTGGAAGTCTTTATCCTATTATCATCAAATCCCAACGTAACATTTGAGATTGAGGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E372442" ref_strand="+" ref_description="SGN-E372442 [TUS-32-K20]">
      <seq>ccagctctactgaaaacatgcaaaaagcagaaactgttgatgtcgtgaggccaacttcatatgttcagtctcgtaagtccttcaaaaagtttctgcttctcttgcattctgacaatgtagacaaaggagatgaaagctatgcctcaatctcaaatgttacgttgggatttgatgataataggataaagacttccaagaacgtatcgtcagccagctctactgaaaacatgcaaaaagcacagggacatattcttgtaaaggggcaattggttgtcagtgggatcgggagtacccaacaagtctataaatataaggatgattcattctgctactccaggaacataagcagctcaaattacacaatacattatgataaagttagcgataattgccccagaatcactttgtctcgtttgcctttcagctttggcaaatttcaatctgttcctgctcgaagggtctctttggcatctcatcttggtgatgttaaagatggtgtctgacattgctccattttattgtcttccactccttcaacataacagttcctctatgtttactgctgtcaaagaagttgtcaactgtcacggccttccaattatgattgtaaggcaatacttctgcattgcctcttttgtttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="117701" stop="116487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117401" g_stop="116787" g_length="615"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="644" r_length="615" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E372442" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117401" e_stop="116787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTATTGTCTTCCACTCCTTCAACATAACAGTTCCTCTATGTTTACTGCTGTCAAAGAAGTTGTCAACTGTCACGGCCTTCCAATTATGATTGTAAGGCAATACTTCTGCATTGCCTCTTTTGTTTCTTG</genome_strand>
        <mrna_strand>GAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTATTGTCTTCCACTCCTTCAACATAACAGTTCCTCTATGTTTACTGCTGTCAAAGAAGTTGTCAACTGTCACGGCCTTCCAATTATGATTGTAAGGCAATACTTCTGCATTGCCTCTTTTGTTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E462046" ref_strand="+" ref_description="SGN-E462046 [cPRO-10-M14]">
      <seq>ttcgttttctcttatgacaaattttacaggcattgatggatcttttgtcacaaatgctagtagatcaatcacattgacaggatgggtaaagtcctcctatgggaacatcactactaagtcagctcaaggtttaagttatagtaattatatggtggagggaaacggaggaaatttgcaaaatgtggatcagattatttatttcaatgaaactgttgatgttgtgatgccatcttcatctgtccagtctcttgagtcctttaaaaagtttctgcttctcttgcattctgacgatgtagacaaaggagacgaaagctatgcctcaatctcaaatgttacgctgggatttaatgataagagggtaaagacgtccaagaacggatcatcagccagctctactgaaaacatgcaaaaagcacagggccatattcttgtaaagggccggatagtagtcagcggggttgggagtacccaacaggtctacaaatataagggcaattcattctgctactccaggaacataagcagctcaaattacacaatacactatgataaagttagcgatagttgccccagaagcactttgtctcgtttgcctttcagctttggcaaatttcggtctgttcctgctcgaagggtctctttggcatctcatcttggtgatgttaaagatggtgtctgacattgctccaattcattgtcttccactncttcaacataacaattcctctttgtgaactgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="117906" stop="116567"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117606" g_stop="116867" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E462046" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E462046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117606" e_stop="116867"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTTTCTCTTAGGACAAATTTTACAGGCATTGATGGATCTTTCGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTTAAGTCATCCTACGGGAACATCACTACTAAGTCAGCTCAAGTTTTAAGTTATAGTAATTATATGGTGGAGGGTAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTATTGTCTTCCACTCCTTCAACATAACAGTTCCTCTATGTTTACTGCT</genome_strand>
        <mrna_strand>TTCGTTTTCTCTTATGACAAATTTTACAGGCATTGATGGATCTTTTGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTAAAGTCCTCCTATGGGAACATCACTACTAAGTCAGCTCAAGGTTTAAGTTATAGTAATTATATGGTGGAGGGAAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTTGTGATGCCATCTTCATCTGTCCAGTCTCTTGAGTCCTTTAAAAAGTTTCTGCTTCTCTTGCATTCTGACGATGTAGACAAAGGAGACGAAAGCTATGCCTCAATCTCAAATGTTACGCTGGGATTTAATGATAAGAGGGTAAAGACGTCCAAGAACGGATCATCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGCCATATTCTTGTAAAGGGCCGGATAGTAGTCAGCGGGGTTGGGAGTACCCAACAGGTCTACAAATATAAGGGCAATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACACTATGATAAAGTTAGCGATAGTTGCCCCAGAAGCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCGGTCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCAATTCATTGTCTTCCACTNCTTCAACATAACAATTCCTCTTTGTGAACTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E294173" ref_strand="+" ref_description="SGN-E294173 [cLET-13-H4]">
      <seq>ccagctctactgaaaacatgcaaaaagcagaaactgttgatgtcgtgaggccaacttcatatgttcagtctcgtaagtccttcaaaaagtttctgcttctcttgcattctgacaatgtagacaaaggagatgaaagctatgcctcaatctcaaatgttacgttgggatttgatgataataggataaagacttccaagaacgtatcgtcagccagctctactgaaaacatgcaaaaagcacagggacatattcttgtaaaggggcaattggttgtcagtgggatcgggagtacccaacaagtctataaatataaggatgattcattctgctactccaggaacataagcagctcaaattacacaatacattatgataaagttagcgataattgccccagaatcactttgtctcgtttgcctttcagctttggcaaatttcaatctgttcctgctcgaagggtctctttggcatctcatcttggtgatgttaaagatggtgtctgacattgctccatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="117701" stop="116613"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117401" g_stop="116913" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="518" r_length="489" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E294173" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117401" e_stop="116913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTA</genome_strand>
        <mrna_strand>GAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E430543" ref_strand="+" ref_description="SGN-E430543 [STM-53-H22]">
      <seq>ttcgttttctcttatgacaaattttacaggcattgatggatcttttgtcacaaatgctagtagatcaatcacattgacaggatgggtaaagtcctcctatgggaacatcactactaagtcagctcaaggtttaagttatagtaattatatggtggagggaaacggaggaaatttgcaaaatgtggatcagattatttatttcaatgaaactgttgatgttgtgatgccatcttcatctgtccagtctcttgagtcctttaaaaagtttctgcttctcttgcattctgacgatgtagacaaaggagacgaaagctatgcctcaatctcaaatgttacgctgggatttaatgataagagggtaaagacgtccaagaacggatcatcagccagctctactgaaaacatgcaaaaagcacagggccatattcttgtaaagggccggatagtagtcagcggggttgggagtacccaacaggtctacaaatataagggcaattcattctgctactccaggaacataagcagctcaaattacacaatacactatgataaagttagcgatagttgccccagaagcactttgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="117906" stop="116721"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117606" g_stop="117021" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E430543" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E430543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117606" e_stop="117021"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTTTCTCTTAGGACAAATTTTACAGGCATTGATGGATCTTTCGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTTAAGTCATCCTACGGGAACATCACTACTAAGTCAGCTCAAGTTTTAAGTTATAGTAATTATATGGTGGAGGGTAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCT</genome_strand>
        <mrna_strand>TTCGTTTTCTCTTATGACAAATTTTACAGGCATTGATGGATCTTTTGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTAAAGTCCTCCTATGGGAACATCACTACTAAGTCAGCTCAAGGTTTAAGTTATAGTAATTATATGGTGGAGGGAAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTTGTGATGCCATCTTCATCTGTCCAGTCTCTTGAGTCCTTTAAAAAGTTTCTGCTTCTCTTGCATTCTGACGATGTAGACAAAGGAGACGAAAGCTATGCCTCAATCTCAAATGTTACGCTGGGATTTAATGATAAGAGGGTAAAGACGTCCAAGAACGGATCATCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGCCATATTCTTGTAAAGGGCCGGATAGTAGTCAGCGGGGTTGGGAGTACCCAACAGGTCTACAAATATAAGGGCAATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACACTATGATAAAGTTAGCGATAGTTGCCCCAGAAGCACTTTGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E465223" ref_strand="+" ref_description="SGN-E465223 [cPRO-20-O22]">
      <seq>ttcgttttctcttatgacaaattttacaggcattgatggatcttttgtcacaaatgctagtagatcaatcacattgacaggatgggtaaagtcctcctatgggaacatcactactaagtcagctcaaggtttaagttatagtaattatatggtggagggaaacggaggaaatttgcaaaatgtggatcagattatttatttcaatgaaactgttgatgttgtgatgccatcttcatctgtccagtctcttgagtcctttaaaaagtttctgcttctcttgcattctgacgatgtagacaaaggagacgaaagctatgcctcaatctcaaatgttacgctgggatttaatgataagagggtaaagacgtccaagaacggatcatcagccagctctactgaaaacatgcaaaaagcacagggccatattcttgtaaagggccggatagtagtcagcggggttgggagtacccaacaggtctaccaatataagggcaattcattctgctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="117906" stop="116867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117606" g_stop="117098" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E465223" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117606" e_stop="117098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTTTCTCTTAGGACAAATTTTACAGGCATTGATGGATCTTTCGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTTAAGTCATCCTACGGGAACATCACTACTAAGTCAGCTCAAGTTTTAAGTTATAGTAATTATATGGTGGAGGGTAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACT</genome_strand>
        <mrna_strand>TTCGTTTTCTCTTATGACAAATTTTACAGGCATTGATGGATCTTTTGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTAAAGTCCTCCTATGGGAACATCACTACTAAGTCAGCTCAAGGTTTAAGTTATAGTAATTATATGGTGGAGGGAAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTTGTGATGCCATCTTCATCTGTCCAGTCTCTTGAGTCCTTTAAAAAGTTTCTGCTTCTCTTGCATTCTGACGATGTAGACAAAGGAGACGAAAGCTATGCCTCAATCTCAAATGTTACGCTGGGATTTAATGATAAGAGGGTAAAGACGTCCAAGAACGGATCATCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGCCATATTCTTGTAAAGGGCCGGATAGTAGTCAGCGGGGTTGGGAGTACCCAACAGGTCTACCAATATAAGGGCAATTCATTCTGCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E562229" ref_strand="+" ref_description="SGN-E562229 [669]">
      <seq>ctttaaactttgagctgacttagtagtgatatttcccataagatgacttttacccatcctgtcaaatgtgattggaatctgctagcatttgtgatgaaagatccatcaatgcctgtaaaatttgtcataagagaaaacgaaagagcagactactatacttcaataacttcccttctgtctttatactcttctcatccaaccaaagatgcaaatttgcatcaatgtaccacacattaagagcattcgtgacactgaatgaaatcttatgcgtatttccatctaaaatcttccctaaaaatggcgtaatttcaatatcatacgatggaagatcaaacgatccgatcccactgataggtctccacaagagaggattgacacccccagtataaatcacagtgaatggccaaactgcaccaaccacgacatcatccacactaactactacttccctaaaagctcccattcccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="117191" stop="118232"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="117472" g_stop="117934" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E562229" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E562229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="117472" e_stop="117934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAAAAC-TTGAGCTGACTTAGTAGTGATGT-TCCCGTAGGATGAC-TTAACCCATCCTGTC-AATGTGATT-G-ATCTACTAGCATTTGTGACGAAAGATCCATCAATGCCTGTAAAATTTGTCCTAAGAGAAAACGAAAGAGGCAGACTAGTATACTTCAATAACTTCCCTTCTGTCTTTATACTCTTATCATCCAACCAAAGATGCAAATTTGCATCAATGTACCACACATTAAGAGCATTAGTGACACTGAATGAAATCTTATGCATATTTCCGTCTAAAATCTTCCCTATAAATGGCGTTATTTCAATATCATATGATGGAAGATCAAACGATCCGATCCCGCTTATAGGTCTCCACAAGAGAGGATTGACACCCCCGGTATAGATCACCGTGAACGGCCAAACTACACCAACCACCACATCATCCACACTAACTACTACTTCCCTAAAAGCT-CCATTCCCTG</genome_strand>
        <mrna_strand>CTTTAAACTTTGAGCTGACTTAGTAGTGATATTTCCCATAAGATGACTTTTACCCATCCTGTCAAATGTGATTGGAATCTGCTAGCATTTGTGATGAAAGATCCATCAATGCCTGTAAAATTTGTCATAAGAGAAAACGAAAGA-GCAGACTACTATACTTCAATAACTTCCCTTCTGTCTTTATACTCTTCTCATCCAACCAAAGATGCAAATTTGCATCAATGTACCACACATTAAGAGCATTCGTGACACTGAATGAAATCTTATGCGTATTTCCATCTAAAATCTTCCCTAAAAATGGCGTAATTTCAATATCATACGATGGAAGATCAAACGATCCGATCCCACTGATAGGTCTCCACAAGAGAGGATTGACACCCCCAGTATAAATCACAGTGAATGGCCAAACTGCACCAACCACGACATCATCCACACTAACTACTACTTCCCTAAAAGCTCCCATTCCCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E230431" ref_strand="-" ref_description="SGN-E230431 [cLEL-35-O17]">
      <seq>gattctcgtcattgaatcagctcggaaacacaatctcccattataacctgacaggaacaagtactatatttgaagatggaaatgggaaaagacaagtcagggaaagcgcgataatccatttttatcgagtctgattcagtgagaatgccccgcggaagaagaatcctgagcatagtttcaggtttttttctaagattaaatagcggtgtaatgttcatgtataagtgtgtttttctgttgctaagttgttgttgttgttgttgttgtgtgcttattatcttcagttcattagaacaagtaattttctcttgaatgacaattattatcaacctgattgatttggtaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="121052" stop="102730"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120752" g_stop="120699" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120698" i_stop="120618" i_length="81">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120617" g_stop="120330" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="342" r_length="288" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="120329" i_stop="119833" i_length="497">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.841" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="119832" g_stop="119814" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="361" r_length="19" r_score="0.579"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E230431" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E230431" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="120752" e_stop="120699"/>
          <exon e_start="120617" e_stop="120330"/>
          <exon e_start="119832" e_stop="119814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAGGTAATTAAATCAATTCACCATTTCAAATTCCATTGTATTCTACCAGCATTAGTTTACTGTTACATTGACCTTAATTTTCAGGAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTGGTATATACATTGTGCCCTATTAAGTTTCAAAATATGAGATGCTTGTCGATGAATGGAATGACTATGTTGCTCAGACTCTATAAATCATGTCAGATCCTTTATAAGTCCGCAACTTTTAGAGGGGATTAGACACTCATTCATTGATATTTTTGAAGAGTCTGAGCAACGTAACATATCAGGAATTTCTTTCTTTTGATTGATTGATTGGTTGGTTGTTTTTTTACAACATTCTAACTTGAAATATTTCATGTTTGAATGACTTCTATAAGTCCTCTAAAAGGAAATGAAAGTTACCTTACATCCCTATCACTACATTGCATGGAGTTTTGGGAGATCATTAAAAGTGTAAAGTCATTTTCTATGAACAGTTAAAAAGTAATTAAGGTGTGGGTTTTAGAAGACTTGTCTTATGGCTTAGCTTCTTCTTTAAATTTCTTATTGAAGTAACTTAAATTCTCTTAACCATAAACTGAAATATTTTCCCTCTAATATCATAGGTCGAACAAATAGATACAC</genome_strand>
        <mrna_strand>GATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAG.................................................................................GAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCCCCGCGGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E540600" ref_strand="-" ref_description="SGN-E540600 [TUS-60-P10]">
      <seq>gagcaggtagttatctgtttaactctcagcctgccccgccgctattacaacaattgttcactcaaaatcagtttttgtctcagaggggaccccttcagtccagttactcaccttcgattcgtgcatggatagatccatcagcgattgctatcgccacagctgatccaattcaccaaaaccaaaaccatcatcaagctgtgtttcctatgtattcaacatcactttctggcatcggattcgcctcagaattaggcggattctctggctttcgcattcctacacgaatccaaggtgaaatagaggaggagcatgatggtgtttccgacaaaccatcctctgcttcctctgattctcgtcattgaatcagctcggaaacacaatctcccattataacctgacaggaacaagtactatatttgaagatggaaatgggaaaagacaagtcagggaaagcgcgataatccatttttatcgagtctgattcagtgagaatgcaccgcggaagaagaatcctgagcatagtttcaggttttttttctaagattaaatagcggtgtaatgttcatgtataagtgtgtttttctgttgctaagttgttgttgttgttgttgttgtgtgcttattatcttcagttcattagaacaagtaattttctcttgaatgacaattattatcaacctgattgatttggtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="121399" stop="120026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121099" g_stop="120699" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120698" i_stop="120618" i_length="81">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120617" g_stop="120326" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="402" r_stop="694" r_length="293" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E540600" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540600" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="121099" e_stop="120699"/>
          <exon e_start="120617" e_stop="120326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTATTCAACATCACTTTCTGGCATCGGATTCGCCTCAGAATTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGGAGCATGATGGTGTTTCCGACAAACCATCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAGGTAATTAAATCAATTCACCATTTCAAATTCCATTGTATTCTACCAGCATTAGTTTACTGTTACATTGACCTTAATTTTCAGGAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAGAAGAATCCTGAGCATAGTTTCAGG-TTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTGGTAT</genome_strand>
        <mrna_strand>GAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTATTCAACATCACTTTCTGGCATCGGATTCGCCTCAGAATTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGGAGCATGATGGTGTTTCCGACAAACCATCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAG.................................................................................GAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTGGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E218155" ref_strand="-" ref_description="SGN-E218155 [cLEL-23-J1]">
      <seq>cctctgattctcgtcattgaagcagctcggaaacgcaatctcccattataacctgacaggaccaagtactatatttgaagatggaagtggcaaaagtcaagtcagggacagcgcgataatcccttttgatcgagtctgattcagtgagaatgcaccgcggaaaaagaatcctgagcatagtctcaggtttttttctaggattaaataacggcgaaatgatcaagtacaagtgtgtttttctgtggctaagaccatgttgttgttgttgatgtgtgcttattagcatccgttcattagaacaagtaaagttctcttgaatgccaatggttatcagcctgattgatttggttacaacaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="121057" stop="120021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120757" g_stop="120699" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120698" i_stop="120618" i_length="81">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120617" g_stop="120328" g_length="290"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="349" r_length="290" r_score="0.893"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="356" polyA_stop="369"/>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E218155" ref_strand="-">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>349</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218155" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="120757" e_stop="120699"/>
          <exon e_start="120617" e_stop="120328"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAGGTAATTAAATCAATTCACCATTTCAAATTCCATTGTATTCTACCAGCATTAGTTTACTGTTACATTGACCTTAATTTTCAGGAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTGGT</genome_strand>
        <mrna_strand>CCTCTGATTCTCGTCATTGAAGCAGCTCGGAAACGCAATCTCCCATTATAACCTGACAG.................................................................................GACCAAGTACTATATTTGAAGATGGAAGTGGCAAAAGTCAAGTCAGGGACAGCGCGATAATCCCTTTTGATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAAAAGAATCCTGAGCATAGTCTCAGGTTTTTTTCTAGGATTAAATAACGGCGAAATGATCAAGTACAAGTGTGTTTTTCTGTGGCTAAGACCATGTTGTTGTTGTTGATGTGTGCTTATTAGCATCCGTTCATTAGAACAAGTAAAGTTCTCTTGAATGCCAATGGTTATCAGCCTGATTGATTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E230931" ref_strand="-" ref_description="SGN-E230931 [cLEL-35-O17]">
      <seq>agcatgatggtgtttccgacaaaccattcctctgcttcctctgattctcgtcattgaatcagctcggaaacacaactctcccattataacctgacaggaacaagtactatatttgaagatggaaatgggaaaagacaagtcagggaaagcgcgataatccatttttatcgagtctgattcagtgagaatgcaccgcggaagaagaatcctgagcatagtttcaggtttttttctaagattaaatagcggtgtaatgttcatgtataagtgtgtttttctgttgctaagttgttgttgttgttgttgttgtgtgcttattatcttcagttcattagaacaagtaattttctcttgaatgacaattattatcaacctgattgatttggcaaaccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="121093" stop="120022"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="120793" g_stop="120699" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="97" r_length="97" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120698" i_stop="120618" i_length="81">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120617" g_stop="120330" g_length="288"/>
          <reference_exon_boundary r_type="cDNA" r_start="98" r_stop="385" r_length="288" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="393" polyA_stop="404"/>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E230931" ref_strand="-">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E230931" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="120793" e_stop="120699"/>
          <exon e_start="120617" e_stop="120330"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCATGATGGTGTTTCCGACAAACCA-TCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAA-TCTCCCATTATAACCTGACAGGTAATTAAATCAATTCACCATTTCAAATTCCATTGTATTCTACCAGCATTAGTTTACTGTTACATTGACCTTAATTTTCAGGAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTG</genome_strand>
        <mrna_strand>AGCATGATGGTGTTTCCGACAAACCATTCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAACTCTCCCATTATAACCTGACAG.................................................................................GAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E540596" ref_strand="+" ref_description="SGN-E540596 [TUS-60-P6]">
      <seq>gttttatgcctcattctttagattctgatgcgatttctgataccatcaaatcatttttcccaatgggaggtagtggttcaaatgaaggtaattctttccagagttttcaacaacataatttgatgtcaagaagccaagatttgaagctttctttacaatcttttcaagatccacaagctcagtttgaagcatcaaatttctttactggatttgatgcttcagtgtggcctcagcaccagcagcagccggttgaacttggtcgactggcggctgctcgtggagacattggtggcggggcaattgctggagcaggtagttatctgtttaactctcagcctgccccgccgctattacaacaattgttcactcaaaatcagtttttgtctcagaggggaccccttcagtccagttactcaccttcgattcgtgcatggatagatccatcagcgattgctatcgccacagctgatccaattcaccaaaaccaaaaccatcatcaagctgtgtttcctatgtattcaacatcactttctggcatcggattcgcctcagaattaggcggattctctggctttcgcattcctacacgaatccaaggtgaaatagaggaggagcatgatggtgtttccgacaaaccatcctctgcttcctctgattctcgtcattgaatcagctcggaaacacaatctcccattataacctgacaggaacaagtactatatttgaagatggaaatgggaaaagancagtcagggaaagcgcgataatccatttttatcgagtctgattcagtgagaatgcaccgcgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="121705" stop="120216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121405" g_stop="120699" g_length="707"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="707" r_length="707" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="120698" i_stop="120618" i_length="81">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="120617" g_stop="120516" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="708" r_stop="809" r_length="102" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E540596" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>809</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540596" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121405" e_stop="120699"/>
          <exon e_start="120617" e_stop="120516"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTATGCCTCATTCTTTAGATTCTGATGCGATTTCTGATACCATCAAATCATTTTTCCCAATGGGAGGTAGTGGTTCAAATGAAGGTAATTCTTTCCAGAGTTTTCAACAACATAATTTGATGTCAAGAAGCCAAGATTTGAAGCTTTCTTTACAATCTTTTCAAGATCCACAAGCTCAGTTTGAAGCATCAAATTTCTTTACTGGATTTGATGCTTCAGTGTGGCCTCAGCACCAGCAGCAGCCGGTTGAACTTGGTCGACTGGCGGCTGCTCGTGGAGACATTGGTGGCGGGGCAATTGCTGGAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTATTCAACATCACTTTCTGGCATCGGATTCGCCTCAGAATTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGGAGCATGATGGTGTTTCCGACAAACCATCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAGGTAATTAAATCAATTCACCATTTCAAATTCCATTGTATTCTACCAGCATTAGTTTACTGTTACATTGACCTTAATTTTCAGGAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGA</genome_strand>
        <mrna_strand>GTTTTATGCCTCATTCTTTAGATTCTGATGCGATTTCTGATACCATCAAATCATTTTTCCCAATGGGAGGTAGTGGTTCAAATGAAGGTAATTCTTTCCAGAGTTTTCAACAACATAATTTGATGTCAAGAAGCCAAGATTTGAAGCTTTCTTTACAATCTTTTCAAGATCCACAAGCTCAGTTTGAAGCATCAAATTTCTTTACTGGATTTGATGCTTCAGTGTGGCCTCAGCACCAGCAGCAGCCGGTTGAACTTGGTCGACTGGCGGCTGCTCGTGGAGACATTGGTGGCGGGGCAATTGCTGGAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTATTCAACATCACTTTCTGGCATCGGATTCGCCTCAGAATTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGGAGCATGATGGTGTTTCCGACAAACCATCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAG.................................................................................GAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGANCAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E548412" ref_strand="+" ref_description="SGN-E548412 [TUS-60-P10]">
      <seq>gttttatgcctcattctttagattctgatgcgatttctgataccatcaaatcatttttcccaatgggaggtagtggttcaaatgaaggtaattctttccagagttttcaacaacataatttgatgtcaagaagccaagatttgaagctttctttacaatcttttcaagatccacaagctcagtttgaagcatcaaatttctttactggatttgatgcttcagtgtggcctcagcaccagcagcagccggttgaacttggtcgactggcggctgctcgtggagacattggtggcggggcaattgctggagcaggtagttatctgtttaactctcagcctgccccgccgctattacaacaattgttcactcaaaatcagtttttgtctcagaggggaccccttcagtccagttactcaccttcgattcgtgcatggatagatccatcagcgattgctatcgccacagctgatccaattcaccaaaaccaaaaccatcatcaagctgtgtttcctatgtattcaacatcactttctggcatcggattcgcctcagaattaggcggattctctggctttcgcattcctacacgaatccaaggtgaaatagaggaggagcatgatggtgtttccgacaaaccatcctctgcttcctctgattctcgtcattgaatcagctcggaaacacaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="121705" stop="120419"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121405" g_stop="120719" g_length="687"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="687" r_length="687" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E548412" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>687</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121405" e_stop="120719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTTATGCCTCATTCTTTAGATTCTGATGCGATTTCTGATACCATCAAATCATTTTTCCCAATGGGAGGTAGTGGTTCAAATGAAGGTAATTCTTTCCAGAGTTTTCAACAACATAATTTGATGTCAAGAAGCCAAGATTTGAAGCTTTCTTTACAATCTTTTCAAGATCCACAAGCTCAGTTTGAAGCATCAAATTTCTTTACTGGATTTGATGCTTCAGTGTGGCCTCAGCACCAGCAGCAGCCGGTTGAACTTGGTCGACTGGCGGCTGCTCGTGGAGACATTGGTGGCGGGGCAATTGCTGGAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTATTCAACATCACTTTCTGGCATCGGATTCGCCTCAGAATTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGGAGCATGATGGTGTTTCCGACAAACCATCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAAT</genome_strand>
        <mrna_strand>GTTTTATGCCTCATTCTTTAGATTCTGATGCGATTTCTGATACCATCAAATCATTTTTCCCAATGGGAGGTAGTGGTTCAAATGAAGGTAATTCTTTCCAGAGTTTTCAACAACATAATTTGATGTCAAGAAGCCAAGATTTGAAGCTTTCTTTACAATCTTTTCAAGATCCACAAGCTCAGTTTGAAGCATCAAATTTCTTTACTGGATTTGATGCTTCAGTGTGGCCTCAGCACCAGCAGCAGCCGGTTGAACTTGGTCGACTGGCGGCTGCTCGTGGAGACATTGGTGGCGGGGCAATTGCTGGAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTATTCAACATCACTTTCTGGCATCGGATTCGCCTCAGAATTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGGAGCATGATGGTGTTTCCGACAAACCATCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E289413" ref_strand="+" ref_description="SGN-E289413 [cLET-3-M23]">
      <seq>ttttatgcctcattctttagattctgatgcgatttctgataccatcaaatcatttttcccaatgggaggtagtggttcaaatgaaggtaattctttccagagttttcaacaacataatttgatgtcaagaagccaagatttgaagctttctttacaatcttttcaagatccacaagctcagtttgaagcatcaaatttctttactggatttgatgcttcagtgtggcctcagcaccagcagcagccggttgaacttggtcgactggcggctgctcgtggagacattggtggcggggcaattgctggagcacgtagttatctgtttaactctcagcctgccccgccgctattacaacaattgttcactcaaaatcagtttttgtctcagaggggaccccttcagtccagttactcaccttcgattcgtgcatggatagatccatcagcgattgctatcgccacagctgatccaattcaccaaaaccaaaaccatcatcaagctgtgtttcctatgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="121704" stop="120589"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121404" g_stop="120889" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="516" r_length="516" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E289413" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289413" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121404" e_stop="120889"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATGCCTCATTCTTTAGATTCTGATGCGATTTCTGATACCATCAAATCATTTTTCCCAATGGGAGGTAGTGGTTCAAATGAAGGTAATTCTTTCCAGAGTTTTCAACAACATAATTTGATGTCAAGAAGCCAAGATTTGAAGCTTTCTTTACAATCTTTTCAAGATCCACAAGCTCAGTTTGAAGCATCAAATTTCTTTACTGGATTTGATGCTTCAGTGTGGCCTCAGCACCAGCAGCAGCCGGTTGAACTTGGTCGACTGGCGGCTGCTCGTGGAGACATTGGTGGCGGGGCAATTGCTGGAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTA</genome_strand>
        <mrna_strand>TTTTATGCCTCATTCTTTAGATTCTGATGCGATTTCTGATACCATCAAATCATTTTTCCCAATGGGAGGTAGTGGTTCAAATGAAGGTAATTCTTTCCAGAGTTTTCAACAACATAATTTGATGTCAAGAAGCCAAGATTTGAAGCTTTCTTTACAATCTTTTCAAGATCCACAAGCTCAGTTTGAAGCATCAAATTTCTTTACTGGATTTGATGCTTCAGTGTGGCCTCAGCACCAGCAGCAGCCGGTTGAACTTGGTCGACTGGCGGCTGCTCGTGGAGACATTGGTGGCGGGGCAATTGCTGGAGCACGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E538064" ref_strand="+" ref_description="SGN-E538064 [TUS-56-P20]">
      <seq>attataattgcagacttaaaggagtataaaatcactaagatttttgtctccaccaaaaatacagatttaaataatttccttaagattgttgccaatctgtgttaagaaaatcagaaattactggttgtgataaatcattcagaaacacgaagtaactgagatttttagaaccactaaataagatgaacataaatttatttgtaaaaataatttaatctgtaaaacttaccagaatcttgaatactctttttgataatttaggaaaaaaatcaagtccactgaattcacagtgtccccttaaggaaattattcccctgtagtatccgaggtttgatttggaatataacctcccagggtaaaatgatcttaatcagtagagtatagataccaaaaactctactgtcagcgaatcaatccacaacaggaaagtacacgaagaaaaatgtgttttttaagaagtaggaagatcagaaaattcgttagtaaatattctgaagactgaatggtatttataggcaagaataatatattctgaaaggttgcaactctttcagaattgacacaaccattaatgaaaggttgcaaactttcaaatggtattgactgttcctgaaagttgcaacctttcagaacagtggcgggaatttttaaatataacggaatttaaaacgggtcacgcgcgcggatccgagtcgggtcgggttaactaaaaagttgaaaacaattcggttaatttctgttatcaactgattaattgaaaataatttttggccatttaannttattaataaataattaaaataatttgtccaaaaaatatctctcgatcatttgccaagtcgaagccgagcgagcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="+" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="130252" stop="131637"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="130252" g_stop="130255" g_length="4"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="84" r_length="3" r_score="0.750"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="130256" i_stop="130556" i_length="301">
            <donor d_prob="0.633" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="130557" g_stop="131324" g_length="768"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="848" r_length="764" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="+" ref_id="SGN-E538064" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538064" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="130252" e_stop="130255"/>
          <exon e_start="130557" e_stop="131324"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGGTCTTAGACAAGTCCTTAGCATTCATCATTGCATATTAGATAGAATAAAAGCGGAAAATTTAAAACTTTTCATTTTAAGTTCAACTTCACGACATATATCAAAATAAAAGCTAACTTGTCTCACATTGACATTTAGACATAAGAGTATGAAAATTGAGATTTAGACTTACATCATTGCAAGTCTTATAAAATAGACACAACGTAGTCCTTGAAATAGGAGAAGTGGAACAATGCCTTTCAATATAAGCAAAACAACTAAAGATAGAATTATAGGGTTTTGTCCTCGGACTTGAGGATTCACATGTTTGCCAATCTGTGTTATGAAAATCAGAAATTACTGGTTGTAATAAATTTTTCAGAAACATGAAATAACTGAGATTTATAGAACCAGTAAGTAAGATGAACATAAATTTATTTGTAAAAAATAATTGAATCTGTAAAAACTTACCAGAATCTGGAATACTCTTTTT--T-ATCTTGAAAGAAAATCAAGTCCACTGAATTCACAGTGTCCCCTTAAGGAAATTATTCCCCTCTAGTATCCGAGGTTTTATTTGGAATATAACCTCCCAGGGTAAAATGATCTTAATCAGTAGAGTGTAGATACCAAAAACTCTATTGTCAGCGAATCAAGCCACAGCAGGAAAGTACACGAAGAAATATGTG-TTTAGAAGAAGAAGGAAGATCAGAAAATTCGTAATAAAATATTCTGAAGACTGAATGGTATTTATAGGCAAGAAGAATATATTCTGAAAGGTTGCAACCCTTTCAGAATTGACACGACCATTAATGAAAGGTTGCAAACTTTCAAATGGTATTGACTGTTCCTGAAAGTTGCAACCTTTCAGAACAGTCATGGCGGGAA-TTTTAAATATAACGGAAATT-AAACGGGTCACGTGCGCGGATTCGAGTCGGGTCGGATTAACTAAAAAGTTGAAAACATTTCGGTTAACTTCTGTTATAAAATAATTAATTGAAAATAATTTTTTTGTCCATTTAATTAATTAAATAAATAAATAAAATAAATTTGTCTAAAAAATAATCTCTCGATCATTTGCCAAAGCTGTAGCCG</genome_strand>
        <mrna_strand>A-AG.............................................................................................................................................................................................................................................................................................................ATTGTTGCCAATCTGTGTTAAGAAAATCAGAAATTACTGGTTGTGATAAATCATTCAGAAACACGAAGTAACTGAGATTTTTAGAACCACTAAATAAGATGAACATAAATTTATTTGT-AAAAATAATTTAATCTGT-AAAACTTACCAGAATCTTGAATACTCTTTTTGATAATTTAGGAAAAAAATCAAGTCCACTGAATTCACAGTGTCCCCTTAAGGAAATTATTCCCCTGTAGTATCCGAGGTTTGATTTGGAATATAACCTCCCAGGGTAAAATGATCTTAATCAGTAGAGTATAGATACCAAAAACTCTACTGTCAGCGAATCAATCCACAACAGGAAAGTACACGAAGAAAAATGTGTTTTTTAAGAAGTAGGAAGATCAGAAAATTCGTTAGTAAATATTCTGAAGACTGAATGGTATTTATAGGCAAGAATAATATATTCTGAAAGGTTGCAACTCTTTCAGAATTGACACAACCATTAATGAAAGGTTGCAAACTTTCAAATGGTATTGACTGTTCCTGAAAGTTGCAACCTTTCAGAACAG---TGGCGGGAATTTTTAAATATAACGGAATTTAAAACGGGTCACGCGCGCGGATCCGAGTCGGGTCGGGTTAACTAAAAAGTTGAAAACAATTCGGTTAATTTCTGTTATCAACTGATTAATTGAAAATAA--TTTTTGGCCATTTAANNTTATTAATAAATAATTAAAAT-AATTTGTCCAAAAAAT-ATCTCTCGATCATTTGCC-AAGTCGAAGCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E242172" ref_strand="+" ref_description="SGN-E242172 [cLED-37-C23]">
      <seq>gatagtaaaactgttggatcacaagtgcaggaacttcaacttattctccatgatctgattgctgaagatatggtggtaaatgaagcttttcaagtggctgcaatgatcgagaagttgcctccttggtggaatgatttcaagaattatctaaagcacaagcgtaaagtaatgaagcttgaagatcttgtgattcatctcaagattgaggaagataacagaaatgccgaaaagaagtcgcgtaagagttcaacaatcattggagttaatattgttgaagaagctcttaccaaagacaaaaagtgaaagaagtccaacgggcagaagtcagaacaggccaagaagaaattcaaaggcaactcttataattgtggcaaggctggtcatagatcttctga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="133761" stop="132781"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133436" g_stop="133081" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="395" r_length="356" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E242172" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="0.901" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133436" e_stop="133081"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTCTCCATGATCTGATTGCTGAAGATATGGTAGTAAATGAAGCTTTTCAAGTGGCTGCAATGATCGAGAAGTTGCCTCCTTCGTGGAACGATTTCAAGAATTATCTAAAGCATAAGCGTAAAGAAATGAAGCTTGAAGATCTTGTGATTCGTCTCAAGATTGAGGAAGATAACAAAAATGCCAAAAAAAAGTTGCGTAAGAGTTCAACAATCATTGGAGTTAATATTGCTGAAGATGATCCTACCAAAGACAAAAAGAAAAAAAAGTCCAACGGGTAGAAGTCAGAATAGGCCAAGAAGAAATTCAAAGGCAACTGTTATAATTGTGGCAAGGCTGGTCATAGGTCTTCTGA</genome_strand>
        <mrna_strand>CTTATTCTCCATGATCTGATTGCTGAAGATATGGTGGTAAATGAAGCTTTTCAAGTGGCTGCAATGATCGAGAAGTTGCCTCCTTGGTGGAATGATTTCAAGAATTATCTAAAGCACAAGCGTAAAGTAATGAAGCTTGAAGATCTTGTGATTCATCTCAAGATTGAGGAAGATAACAGAAATGCCGAAAAGAAGTCGCGTAAGAGTTCAACAATCATTGGAGTTAATATTGTTGAAGAAGCTCTTACCAAAGACAAAAAGTGAAAGAAGTCCAACGGGCAGAAGTCAGAACAGGCCAAGAAGAAATTCAAAGGCAACTCTTATAATTGTGGCAAGGCTGGTCATAGATCTTCTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-zto5Gg/sgn_ests_tomato_potato" ref_id="SGN-E242208" ref_strand="+" ref_description="SGN-E242208 [cLED-37-E10]">
      <seq>gtaaaactgttggatcacaagtgcaggaacttcaacttattctccatgatctgattgctgaagatatggtggtaaatgaagcttttcaagtggctgcaatgatcgagaagttgcctccttggtggaatgatttcaagaattatctaaagcacaagcgtaaagtaatgaagcttgaagatcttgggattcatctcaagattgaggaagataacagaaatgccgaaaagaagtcccgtaagagttcaacaatcattggagttaatattgttgaagaagctcttaccaaagacaaaaagtgaaagaagtccaacgggcagaagtcagaacaggccaagaagaaattcaaaggcaactcttataatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12SLe0004H16-Wbau0/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12SLe0004H16.1" temp_strand="-" temp_description="C12SLe0004H16.1  AC216367.1 htgs_phase:1 submitted_to_sgn_as:C12SLe0004H16 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="133735" stop="132809"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133436" g_stop="133109" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="36" r_stop="363" r_length="328" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12SLe0004H16.1" gen_strand="-" ref_id="SGN-E242208" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>328</cumulative_length_of_scored_exons>
        <coverage percentage="0.904" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12SLe0004H16.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E242208" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133436" e_stop="133109"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTATTCTCCATGATCTGATTGCTGAAGATATGGTAGTAAATGAAGCTTTTCAAGTGGCTGCAATGATCGAGAAGTTGCCTCCTTCGTGGAACGATTTCAAGAATTATCTAAAGCATAAGCGTAAAGAAATGAAGCTTGAAGATCTTGTGATTCGTCTCAAGATTGAGGAAGATAACAAAAATGCCAAAAAAAAGTTGCGTAAGAGTTCAACAATCATTGGAGTTAATATTGCTGAAGATGATCCTACCAAAGACAAAAAGAAAAAAAAGTCCAACGGGTAGAAGTCAGAATAGGCCAAGAAGAAATTCAAAGGCAACTGTTATAATT</genome_strand>
        <mrna_strand>CTTATTCTCCATGATCTGATTGCTGAAGATATGGTGGTAAATGAAGCTTTTCAAGTGGCTGCAATGATCGAGAAGTTGCCTCCTTGGTGGAATGATTTCAAGAATTATCTAAAGCACAAGCGTAAAGTAATGAAGCTTGAAGATCTTGGGATTCATCTCAAGATTGAGGAAGATAACAGAAATGCCGAAAAGAAGTCCCGTAAGAGTTCAACAATCATTGGAGTTAATATTGTTGAAGAAGCTCTTACCAAAGACAAAAAGTGAAAGAAGTCCAACGGGCAGAAGTCAGAACAGGCCAAGAAGAAATTCAAAGGCAACTCTTATAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>117</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="2185" PGL_stop="4753"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2185" e_stop="2436"/>
            <exon e_start="2741" e_stop="2794"/>
            <exon e_start="3082" e_stop="3124"/>
            <exon e_start="3732" e_stop="3840"/>
            <exon e_start="4191" e_stop="4389"/>
            <exon e_start="4711" e_stop="4753"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="0.992"/>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.671" acc_prob="0.355" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.992" e_score="0.970"/>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="2185" e_stop="2436" e_length="252"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="2437" i_stop="2740" i_length="304"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2741" e_stop="2794" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="2795" i_stop="3081" i_length="287"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="3082" e_stop="3124" e_length="43"/>
          </exon>
          <intron i_serial="3" don_prob="0.941" acc_prob="0.974">
            <gDNA_intron_boundary i_start="3125" i_stop="3731" i_length="607"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="3732" e_stop="3840" e_length="109"/>
          </exon>
          <intron i_serial="4" don_prob="0.671" acc_prob="0.355">
            <gDNA_intron_boundary i_start="3841" i_stop="4190" i_length="350"/>
          </intron>
          <exon e_serial="5" e_score="0.970">
            <gDNA_exon_boundary e_start="4191" e_stop="4389" e_length="199"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.992">
            <gDNA_intron_boundary i_start="4390" i_stop="4710" i_length="321"/>
          </intron>
          <exon e_serial="6" e_score="0.930">
            <gDNA_exon_boundary e_start="4711" e_stop="4753" e_length="43"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2185" stop="2436"/>
              <exon start="2741" stop="2794"/>
              <exon start="3082" stop="3124"/>
              <exon start="3732" stop="3840"/>
              <exon start="4191" stop="4300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342451" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2203" stop="2436"/>
              <exon start="2741" stop="2794"/>
              <exon start="3082" stop="3124"/>
              <exon start="3732" stop="3840"/>
              <exon start="4191" stop="4389"/>
              <exon start="4711" stop="4752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412081" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2203" stop="2436"/>
              <exon start="2741" stop="2794"/>
              <exon start="3082" stop="3124"/>
              <exon start="3732" stop="3840"/>
              <exon start="4191" stop="4293"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E470027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2218" stop="2436"/>
              <exon start="2741" stop="2794"/>
              <exon start="3082" stop="3124"/>
              <exon start="3732" stop="3840"/>
              <exon start="4191" stop="4389"/>
              <exon start="4711" stop="4753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2218" stop="2436"/>
              <exon start="2741" stop="2794"/>
              <exon start="3082" stop="3124"/>
              <exon start="3732" stop="3840"/>
              <exon start="4191" stop="4389"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E448642" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCGGTCCAGTTGCTCCAGTCATGATAAGCACCGTCGGGACGGGTGGCGTTCGAATAAGCAGCTATCTCCGGCTTCCGTACACGGTGGAGACACTTCTCCGCCGCCGCCGTCTCTTCACCTCATGCTCTGCCTCCTCTACCAAAGAGAAAGTTATTGTCATTTCCGGACCTACCGGTGCCGGAAAAAGCAAGCTAGCATTAGAGCTCGCTAAGCGAATCAATGGCGAAATCATCAGTGCAGACTCTGTACAG : GTGTATCGAGGGCTTGATGTCGGTTCAGCAAAGCCTTCCTTTGATGAACGAAAG : GAAGTAGTACATCATCTGGTTGACATATTGCATCCATCCGAAG : ATTATTCTGTTGGACAATTTTTTGAGGATGCTAGGCAAACTACCAGAGATATCCTTGATAGGGGCCGTGTTCCAATAGTCGCGGGTGGTACTGGATTATATTTGCGATG : GTTTATTTATGGGAGGCCAGATGTTCCAAAAGCCTCTCGAGAGATTGCTGCTGAAGTCGACTCAGAGCTTGCAAGTTTACAGAATGATGAGGACTGGAATGCTGCTGTTCAGTTGTTGGTTAAAGCTGGTGATCCCGGTGCCCAGTCTTTACCGGCAAATGATTGGTATCGCTTGCGTCGCAGGCTTGAAATTGTTAAG : TCTACTGGGTCGCCTCCATCAGCTTTTGAAGTACCATATAATT</gDNA_template>
            <first_frame> I  G  P  V  A  P  V  M  I  S  T  V  G  T  G  G  V  R  I  S  S  Y  L  R  L  P  Y  T  V  E  T  L  L  R  R  R  R  L  F  T  S  C  S  A  S  S  T  K  E  K  V  I  V  I  S  G  P  T  G  A  G  K  S  K  L  A  L  E  L  A  K  R  I  N  G  E  I  I  S  A  D  S  V  Q  :  V  Y  R  G  L  D  V  G  S  A  K  P  S  F  D  E  R  K  :  E  V  V  H  H  L  V  D  I  L  H  P  S  E   : D  Y  S  V  G  Q  F  F  E  D  A  R  Q  T  T  R  D  I  L  D  R  G  R  V  P  I  V  A  G  G  T  G  L  Y  L  R  W :   F  I  Y  G  R  P  D  V  P  K  A  S  R  E  I  A  A  E  V  D  S  E  L  A  S  L  Q  N  D  E  D  W  N  A  A  V  Q  L  L  V  K  A  G  D  P  G  A  Q  S  L  P  A  N  D  W  Y  R  L  R  R  R  L  E  I  V  K  :  S  T  G  S  P  P  S  A  F  E  V  P  Y  N  </first_frame>
            <second_frame>  S  V  Q  L  L  Q  S  *  *  A  P  S  G  R  V  A  F  E  *  A  A  I  S  G  F  R  T  R  W  R  H  F  S  A  A  A  V  S  S  P  H  A  L  P  P  L  P  K  R  K  L  L  S  F  P  D  L  P  V  P  E  K  A  S  *  H  *  S  S  L  S  E  S  M  A  K  S  S  V  Q  T  L  Y  R :   C  I  E  G  L  M  S  V  Q  Q  S  L  P  L  M  N  E  R :   K  *  Y  I  I  W  L  T  Y  C  I  H  P  K  :  I  I  L  L  D  N  F  L  R  M  L  G  K  L  P  E  I  S  L  I  G  A  V  F  Q  *  S  R  V  V  L  D  Y  I  C  D   : G  L  F  M  G  G  Q  M  F  Q  K  P  L  E  R  L  L  L  K  S  T  Q  S  L  Q  V  Y  R  M  M  R  T  G  M  L  L  F  S  C  W  L  K  L  V  I  P  V  P  S  L  Y  R  Q  M  I  G  I  A  C  V  A  G  L  K  L  L  S :   L  L  G  R  L  H  Q  L  L  K  Y  H  I  I </second_frame>
            <third_frame>   R  S  S  C  S  S  H  D  K  H  R  R  D  G  W  R  S  N  K  Q  L  S  P  A  S  V  H  G  G  D  T  S  P  P  P  P  S  L  H  L  M  L  C  L  L  Y  Q  R  E  S  Y  C  H  F  R  T  Y  R  C  R  K  K  Q  A  S  I  R  A  R  *  A  N  Q  W  R  N  H  Q  C  R  L  C  T   : G  V  S  R  A  *  C  R  F  S  K  A  F  L  *  *  T  K   : G  S  S  T  S  S  G  *  H  I  A  S  I  R  R :   L  F  C  W  T  I  F  *  G  C  *  A  N  Y  Q  R  Y  P  *  *  G  P  C  S  N  S  R  G  W  Y  W  I  I  F  A  M  :  V  Y  L  W  E  A  R  C  S  K  S  L  S  R  D  C  C  *  S  R  L  R  A  C  K  F  T  E  *  *  G  L  E  C  C  C  S  V  V  G  *  S  W  *  S  R  C  P  V  F  T  G  K  *  L  V  S  L  A  S  Q  A  *  N  C  *   : V  Y  W  V  A  S  I  S  F  *  S  T  I  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2185" stop="2436"/>
                    <exon start="2741" stop="2794"/>
                    <exon start="3082" stop="3124"/>
                    <exon start="3732" stop="3840"/>
                    <exon start="4191" stop="4389"/>
                    <exon start="4711" stop="4752"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGPVAPVMISTVGTGGVRISSYLRLPYTVETLLRRRRLFTSCSASSTKEKVIVISGPTGAGKSKLALELAKRINGEIISADSVQVYRGLDVGSAKPSFDERKEVVHHLVDILHPSEDYSVGQFFEDARQTTRDILDRGRVPIVAGGTGLYLRWFIYGRPDVPKASREIAAEVDSELASLQNDEDWNAAVQLLVKAGDPGAQSLPANDWYRLRRRLEIVKSTGSPPSAFEVPYN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="4846" PGL_stop="8988"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4900" e_stop="4933"/>
            <exon e_start="5542" e_stop="5636"/>
            <exon e_start="5713" e_stop="5807"/>
            <exon e_start="7148" e_stop="7223"/>
            <exon e_start="7928" e_stop="8067"/>
            <exon e_start="8141" e_stop="8988"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.944" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.655" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.773" e_score="1.000"/>
          <exon-only e_score="0.960"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="4900" e_stop="4933" e_length="34"/>
          </exon>
          <intron i_serial="1" don_prob="0.944" acc_prob="0.995">
            <gDNA_intron_boundary i_start="4934" i_stop="5541" i_length="608"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5542" e_stop="5636" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.987">
            <gDNA_intron_boundary i_start="5637" i_stop="5712" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="5713" e_stop="5807" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.998">
            <gDNA_intron_boundary i_start="5808" i_stop="7147" i_length="1340"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="7148" e_stop="7223" e_length="76"/>
          </exon>
          <intron i_serial="4" don_prob="0.936" acc_prob="0.655">
            <gDNA_intron_boundary i_start="7224" i_stop="7927" i_length="704"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="7928" e_stop="8067" e_length="140"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.773">
            <gDNA_intron_boundary i_start="8068" i_stop="8140" i_length="73"/>
          </intron>
          <exon e_serial="6" e_score="0.960">
            <gDNA_exon_boundary e_start="8141" e_stop="8988" e_length="848"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4900" stop="4933"/>
              <exon start="5542" stop="5636"/>
              <exon start="5713" stop="5807"/>
              <exon start="7148" stop="7223"/>
              <exon start="7928" stop="8067"/>
              <exon start="8141" stop="8313"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368381" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4900" stop="4933"/>
              <exon start="5542" stop="5636"/>
              <exon start="5713" stop="5807"/>
              <exon start="7148" stop="7223"/>
              <exon start="7928" stop="8067"/>
              <exon start="8141" stop="8276"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246333" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4900" stop="4933"/>
              <exon start="5542" stop="5636"/>
              <exon start="5713" stop="5807"/>
              <exon start="7148" stop="7223"/>
              <exon start="7928" stop="8067"/>
              <exon start="8141" stop="8263"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368597" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8189" stop="8719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="8370" stop="8988"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368380" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATTGATTTTCGGTGTGAAGATATGCTCTTAG : GAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAA : GCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACG : AAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTG : GAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACCGTCAAGCTGCAGTATTGAAGACCTATCGTACAATAAACAG : GCATTTCATTGGGCATGAAGATTGTGTGGATGTTCTGGACTGGATAAAGAAGATATATGGCCAACCTACTGACTCTCTTTGTTAACGAACATCTAAGGGACTTTGTCTTTCACTTCAAGTTGTCAAAATCAAAACATCCAAAAGTTGTTCTCGTTGTTATCGAGGTTAGCTTATGGAGATTATTACAACTATTATTAGTATTTTGATTTGGTTCCACTTCGAGCTGTGAAATTGCTTGCGCCTACATTAAACTCCCTTGGGATGTAGCACTTCCCTAATGTTTACTGAGCTTCCCTGTTTCAGATTTGATTGCTACTTTTCCCTTAAAATTTGGATCGTTTACTAGAGAGTTCTCTTTCTCTATCTCTATAGTATTGCGAAGGTTGAAGTTGTTACAATTGAAGAGGGTAATGAGGCCGTCAAGCTGTGGCTGGGGAATGTCAATCTGCATCTATGAAATTTTGTACATGTAGGAGTCTGTTCAAGAGCTTTATTTGCCAGAACATACATTTTCCGCGAGGATGTTGCTCGAATACTGTATATTCATTTCGAATGTCTCACTCCCATCAAACACATCGCTGGCATCACACTCCGATGCATTTCTTAGATGTATTTATATGCATTTTACATTTGTCTCGCATAATTGATACAAGTTGTGTGAGGTTCTCTTTTTGTTTCACAAATTGGTGGACTCAAAGTTTGTACCAAAAAAAGTGTAAAGAATTGGGTTCACTAACTTGTAAAACAAAAAGTATAACTTGTGTTTTGCTGTATGAGGCATAAAAATAAATGTTCTCGATATCATAAAGATGAGAACTTGGTCGCATGCGCAAAGATATTTGAAGATA</gDNA_template>
            <first_frame> S  I  D  F  R  C  E  D  M  L  L   : G  A  D  G  I  L  S  E  A  R  W  L  L  D  V  G  L  L  P  N  S  N  S  A  T  R  A  I  G  Y  R  Q  :  A  M  E  Y  L  L  R  C  R  E  D  G  G  W  S  S  A  G  D  F  H  D  F  L  S  E  F  Q  K  E  S  R :   N  F  A  K  R  Q  M  T  W  F  R  N  E  Q  I  Y  E  W  I  D  A  S  K  P  L  :  E  K  V  L  S  F  I  C  D  S  Y  N  S  Q  D  G  H  L  Q  M  P  E  S  L  R  M  R  K  D  I  R  N  H  R  Q  A  A  V  L  K  T  Y  R  T  I  N  R :   H  F  I  G  H  E  D  C  V  D  V  L  D  W  I  K  K  I  Y  G  Q  P  T  D  S  L  C  *  R  T  S  K  G  L  C  L  S  L  Q  V  V  K  I  K  T  S  K  S  C  S  R  C  Y  R  G  *  L  M  E  I  I  T  T  I  I  S  I  L  I  W  F  H  F  E  L  *  N  C  L  R  L  H  *  T  P  L  G  C  S  T  S  L  M  F  T  E  L  P  C  F  R  F  D  C  Y  F  S  L  K  I  W  I  V  Y  *  R  V  L  F  L  Y  L  Y  S  I  A  K  V  E  V  V  T  I  E  E  G  N  E  A  V  K  L  W  L  G  N  V  N  L  H  L  *  N  F  V  H  V  G  V  C  S  R  A  L  F  A  R  T  Y  I  F  R  E  D  V  A  R  I  L  Y  I  H  F  E  C  L  T  P  I  K  H  I  A  G  I  T  L  R  C  I  S  *  M  Y  L  Y  A  F  Y  I  C  L  A  *  L  I  Q  V  V  *  G  S  L  F  V  S  Q  I  G  G  L  K  V  C  T  K  K  S  V  K  N  W  V  H  *  L  V  K  Q  K  V  *  L  V  F  C  C  M  R  H  K  N  K  C  S  R  Y  H  K  D  E  N  L  V  A  C  A  K  I  F  E  D  </first_frame>
            <second_frame>  Q  L  I  F  G  V  K  I  C  S  *  :  E  Q  M  E  F  Y  L  R  P  G  G  F  L  M  W  V  F  C  R  T  R  I  L  L  L  G  Q  L  V  T  D  K :   Q  W  N  T  F  *  G  V  G  K  M  E  D  G  V  L  L  G  T  S  M  I  F  Y  L  N  F  R  K  N  H   : E  I  L  Q  K  G  R  *  H  G  F  A  M  N  R  F  M  S  G  *  M  L  L  N  L  W :   K  R  F  L  A  S  Y  V  I  H  I  T  V  R  M  A  I  S  R  C  P  S  H  F  V  C  G  K  I  *  E  I  T  V  K  L  Q  Y  *  R  P  I  V  Q  *  T   : G  I  S  L  G  M  K  I  V  W  M  F  W  T  G  *  R  R  Y  M  A  N  L  L  T  L  F  V  N  E  H  L  R  D  F  V  F  H  F  K  L  S  K  S  K  H  P  K  V  V  L  V  V  I  E  V  S  L  W  R  L  L  Q  L  L  L  V  F  *  F  G  S  T  S  S  C  E  I  A  C  A  Y  I  K  L  P  W  D  V  A  L  P  *  C  L  L  S  F  P  V  S  D  L  I  A  T  F  P  L  K  F  G  S  F  T  R  E  F  S  F  S  I  S  I  V  L  R  R  L  K  L  L  Q  L  K  R  V  M  R  P  S  S  C  G  W  G  M  S  I  C  I  Y  E  I  L  Y  M  *  E  S  V  Q  E  L  Y  L  P  E  H  T  F  S  A  R  M  L  L  E  Y  C  I  F  I  S  N  V  S  L  P  S  N  T  S  L  A  S  H  S  D  A  F  L  R  C  I  Y  M  H  F  T  F  V  S  H  N  *  Y  K  L  C  E  V  L  F  L  F  H  K  L  V  D  S  K  F  V  P  K  K  V  *  R  I  G  F  T  N  L  *  N  K  K  Y  N  L  C  F  A  V  *  G  I  K  I  N  V  L  D  I  I  K  M  R  T  W  S  H  A  Q  R  Y  L  K  I </second_frame>
            <third_frame>   N  *  F  S  V  *  R  Y  A  L  R :   S  R  W  N  S  I  *  G  Q  V  A  S  *  C  G  S  F  A  E  L  E  F  C  Y  S  G  N  W  L  P  T   : S  N  G  I  P  S  K  V  *  G  R  W  R  M  E  F  C  W  G  L  P  *  F  F  I  *  I  S  E  R  I  T  :  K  F  C  K  K  A  D  D  M  V  S  Q  *  T  D  L  *  V  D  R  C  F  *  T  F   : G  K  G  S  *  L  H  M  *  F  I  *  Q  S  G  W  P  S  P  D  A  R  V  T  S  Y  A  E  R  Y  K  K  S  P  S  S  C  S  I  E  D  L  S  Y  N  K  Q  :  A  F  H  W  A  *  R  L  C  G  C  S  G  L  D  K  E  D  I  W  P  T  Y  *  L  S  L  L  T  N  I  *  G  T  L  S  F  T  S  S  C  Q  N  Q  N  I  Q  K  L  F  S  L  L  S  R  L  A  Y  G  D  Y  Y  N  Y  Y  *  Y  F  D  L  V  P  L  R  A  V  K  L  L  A  P  T  L  N  S  L  G  M  *  H  F  P  N  V  Y  *  A  S  L  F  Q  I  *  L  L  L  F  P  *  N  L  D  R  L  L  E  S  S  L  S  L  S  L  *  Y  C  E  G  *  S  C  Y  N  *  R  G  *  *  G  R  Q  A  V  A  G  E  C  Q  S  A  S  M  K  F  C  T  C  R  S  L  F  K  S  F  I  C  Q  N  I  H  F  P  R  G  C  C  S  N  T  V  Y  S  F  R  M  S  H  S  H  Q  T  H  R  W  H  H  T  P  M  H  F  L  D  V  F  I  C  I  L  H  L  S  R  I  I  D  T  S  C  V  R  F  S  F  C  F  T  N  W  W  T  Q  S  L  Y  Q  K  K  C  K  E  L  G  S  L  T  C  K  T  K  S  I  T  C  V  L  L  Y  E  A  *  K  *  M  F  S  I  S  *  R  *  E  L  G  R  M  R  K  D  I  *  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4900" stop="4933"/>
                    <exon start="5542" stop="5636"/>
                    <exon start="5713" stop="5807"/>
                    <exon start="7148" stop="7223"/>
                    <exon start="7928" stop="8067"/>
                    <exon start="8141" stop="8225"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>522</number_coding_nucleotides>
                  <number_encoded_amino_acids>174</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIDFRCEDMLLGADGILSEARWLLDVGLLPNSNSATRAIGYRQAMEYLLRCREDGGWSSAGDFHDFLSEFQKESRNFAKRQMTWFRNEQIYEWIDASKPLEKVLSFICDSYNSQDGHLQMPESLRMRKDIRNHRQAAVLKTYRTINRHFIGHEDCVDVLDWIKKIYGQPTDSLC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="8555" stop="8923"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRQAVAGECQSASMKFCTCRSLFKSFICQNIHFPRGCCSNTVYSFRMSHSHQTHRWHHTPMHFLDVFICILHLSRIIDTSCVRFSFCFTNWWTQSLYQKKCKELGSLTCKTKSITCVLLYEA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="4846" e_stop="4933"/>
            <exon e_start="5542" e_stop="5636"/>
            <exon e_start="5713" e_stop="5807"/>
            <exon e_start="6653" e_stop="6781"/>
            <exon e_start="7148" e_stop="7223"/>
            <exon e_start="7928" e_stop="8027"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.944" acc_prob="0.995" e_score="0.989"/>
          <exon-intron don_prob="0.960" acc_prob="0.987" e_score="0.958"/>
          <exon-intron don_prob="0.956" acc_prob="0.175" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.655" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.989">
            <gDNA_exon_boundary e_start="4846" e_stop="4933" e_length="88"/>
          </exon>
          <intron i_serial="1" don_prob="0.944" acc_prob="0.995">
            <gDNA_intron_boundary i_start="4934" i_stop="5541" i_length="608"/>
          </intron>
          <exon e_serial="2" e_score="0.958">
            <gDNA_exon_boundary e_start="5542" e_stop="5636" e_length="95"/>
          </exon>
          <intron i_serial="2" don_prob="0.960" acc_prob="0.987">
            <gDNA_intron_boundary i_start="5637" i_stop="5712" i_length="76"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="5713" e_stop="5807" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.956" acc_prob="0.175">
            <gDNA_intron_boundary i_start="5808" i_stop="6652" i_length="845"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="6653" e_stop="6781" e_length="129"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="6782" i_stop="7147" i_length="366"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="7148" e_stop="7223" e_length="76"/>
          </exon>
          <intron i_serial="5" don_prob="0.936" acc_prob="0.655">
            <gDNA_intron_boundary i_start="7224" i_stop="7927" i_length="704"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="7928" e_stop="8027" e_length="100"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4846" stop="4933"/>
              <exon start="5542" stop="5636"/>
              <exon start="5713" stop="5807"/>
              <exon start="6653" stop="6781"/>
              <exon start="7148" stop="7223"/>
              <exon start="7928" stop="8027"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268816" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GATTATGATTTTCTTTGTTATTTCCTTTCCACCAGTAGGATAGATCTCTATAGATCAATTGATTTTCGGTGTGAAGATATGCTCTTAG : GAGCAGATGGAATTCTATCTGAGGCCAGGTGGCTTCTTGATGTGGGTCTTTTGCCGAACTCGAATTCTGCTACTCGGGCAATTGGTTACCGACAA : GCAATGGAATACCTTCTAAGGTGTAGGGAAGATGGAGGATGGAGTTCTGCTGGGGACTTCCATGATTTTTTATCTGAATTTCAGAAAGAATCACG : TTACTTTTCAAGATGAGAAAAGAGCAGTATGGATGATTGTGGATGCAAAAGTGAGGAACTTCTGATAGTGCTGCCTAAATTGGTCAACCCTTACTCCTGTCTGGGCTCTGGTCCCTTCCATACATTTGG : AAATTTTGCAAAAAGGCAGATGACATGGTTTCGCAATGAACAGATTTATGAGTGGATAGATGCTTCTAAACCTTTG : GAAAAGGTTCTTAGCTTCATATGTGATTCATATAACAGTCAGGATGGCCATCTCCAGATGCCCGAGTCACTTCGTATGCGGAAAGATATAAGAAATCACC</gDNA_template>
            <first_frame> D  Y  D  F  L  C  Y  F  L  S  T  S  R  I  D  L  Y  R  S  I  D  F  R  C  E  D  M  L  L   : G  A  D  G  I  L  S  E  A  R  W  L  L  D  V  G  L  L  P  N  S  N  S  A  T  R  A  I  G  Y  R  Q  :  A  M  E  Y  L  L  R  C  R  E  D  G  G  W  S  S  A  G  D  F  H  D  F  L  S  E  F  Q  K  E  S  R :   Y  F  S  R  *  E  K  S  S  M  D  D  C  G  C  K  S  E  E  L  L  I  V  L  P  K  L  V  N  P  Y  S  C  L  G  S  G  P  F  H  T  F  G :   N  F  A  K  R  Q  M  T  W  F  R  N  E  Q  I  Y  E  W  I  D  A  S  K  P  L  :  E  K  V  L  S  F  I  C  D  S  Y  N  S  Q  D  G  H  L  Q  M  P  E  S  L  R  M  R  K  D  I  R  N  H  </first_frame>
            <second_frame>  I  M  I  F  F  V  I  S  F  P  P  V  G  *  I  S  I  D  Q  L  I  F  G  V  K  I  C  S  *  :  E  Q  M  E  F  Y  L  R  P  G  G  F  L  M  W  V  F  C  R  T  R  I  L  L  L  G  Q  L  V  T  D  K :   Q  W  N  T  F  *  G  V  G  K  M  E  D  G  V  L  L  G  T  S  M  I  F  Y  L  N  F  R  K  N  H   : V  T  F  Q  D  E  K  R  A  V  W  M  I  V  D  A  K  V  R  N  F  *  *  C  C  L  N  W  S  T  L  T  P  V  W  A  L  V  P  S  I  H  L   : E  I  L  Q  K  G  R  *  H  G  F  A  M  N  R  F  M  S  G  *  M  L  L  N  L  W :   K  R  F  L  A  S  Y  V  I  H  I  T  V  R  M  A  I  S  R  C  P  S  H  F  V  C  G  K  I  *  E  I  T </second_frame>
            <third_frame>   L  *  F  S  L  L  F  P  F  H  Q  *  D  R  S  L  *  I  N  *  F  S  V  *  R  Y  A  L  R :   S  R  W  N  S  I  *  G  Q  V  A  S  *  C  G  S  F  A  E  L  E  F  C  Y  S  G  N  W  L  P  T   : S  N  G  I  P  S  K  V  *  G  R  W  R  M  E  F  C  W  G  L  P  *  F  F  I  *  I  S  E  R  I  T  :  L  L  F  K  M  R  K  E  Q  Y  G  *  L  W  M  Q  K  *  G  T  S  D  S  A  A  *  I  G  Q  P  L  L  L  S  G  L  W  S  L  P  Y  I  W  :  K  F  C  K  K  A  D  D  M  V  S  Q  *  T  D  L  *  V  D  R  C  F  *  T  F   : G  K  G  S  *  L  H  M  *  F  I  *  Q  S  G  W  P  S  P  D  A  R  V  T  S  Y  A  E  R  Y  K  K  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4846" stop="4933"/>
                    <exon start="5542" stop="5636"/>
                    <exon start="5713" stop="5807"/>
                    <exon start="6653" stop="6668"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DYDFLCYFLSTSRIDLYRSIDFRCEDMLLGADGILSEARWLLDVGLLPNSNSATRAIGYRQAMEYLLRCREDGGWSSAGDFHDFLSEFQKESRYFSR*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="6669" stop="6781"/>
                    <exon start="7148" stop="7223"/>
                    <exon start="7928" stop="8026"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKSSMDDCGCKSEELLIVLPKLVNPYSCLGSGPFHTFGNFAKRQMTWFRNEQIYEWIDASKPLEKVLSFICDSYNSQDGHLQMPESLRMRKDIRNH</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="10421" PGL_stop="15032"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="10421" e_stop="10721"/>
            <exon e_start="12603" e_stop="12776"/>
            <exon e_start="12876" e_stop="13044"/>
            <exon e_start="13155" e_stop="13216"/>
            <exon e_start="13349" e_stop="13470"/>
            <exon e_start="14201" e_stop="14318"/>
            <exon e_start="14591" e_stop="15032"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="10421" e_stop="10721" e_length="301"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="10722" i_stop="12602" i_length="1881"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12603" e_stop="12776" e_length="174"/>
          </exon>
          <intron i_serial="2" don_prob="0.961" acc_prob="0.000">
            <gDNA_intron_boundary i_start="12777" i_stop="12875" i_length="99"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12876" e_stop="13044" e_length="169"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="13045" i_stop="13154" i_length="110"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="13155" e_stop="13216" e_length="62"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.997">
            <gDNA_intron_boundary i_start="13217" i_stop="13348" i_length="132"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="13349" e_stop="13470" e_length="122"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="13471" i_stop="14200" i_length="730"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="14201" e_stop="14318" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="14319" i_stop="14590" i_length="272"/>
          </intron>
          <exon e_serial="7" e_score="0.986">
            <gDNA_exon_boundary e_start="14591" e_stop="15032" e_length="442"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10421" stop="10721"/>
              <exon start="12603" stop="12776"/>
              <exon start="12876" stop="13044"/>
              <exon start="13155" stop="13216"/>
              <exon start="13349" stop="13443"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10433" stop="10721"/>
              <exon start="12603" stop="12776"/>
              <exon start="12876" stop="13044"/>
              <exon start="13155" stop="13216"/>
              <exon start="13349" stop="13368"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603918" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10435" stop="10721"/>
              <exon start="12603" stop="12776"/>
              <exon start="12876" stop="13044"/>
              <exon start="13155" stop="13166"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10437" stop="10721"/>
              <exon start="12603" stop="12776"/>
              <exon start="12876" stop="12965"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339803" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10439" stop="10721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474324" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10444" stop="10721"/>
              <exon start="12603" stop="12776"/>
              <exon start="12876" stop="13044"/>
              <exon start="13155" stop="13216"/>
              <exon start="13349" stop="13470"/>
              <exon start="14201" stop="14318"/>
              <exon start="14591" stop="14728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10446" stop="10721"/>
              <exon start="12603" stop="12776"/>
              <exon start="12876" stop="13044"/>
              <exon start="13155" stop="13216"/>
              <exon start="13349" stop="13470"/>
              <exon start="14201" stop="14246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="10449" stop="10721"/>
              <exon start="12603" stop="12776"/>
              <exon start="12876" stop="12940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286644" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12918" stop="13044"/>
              <exon start="13155" stop="13216"/>
              <exon start="13349" stop="13470"/>
              <exon start="14201" stop="14318"/>
              <exon start="14591" stop="14694"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214620" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12969" stop="13044"/>
              <exon start="13155" stop="13216"/>
              <exon start="13349" stop="13470"/>
              <exon start="14201" stop="14318"/>
              <exon start="14591" stop="14902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346824" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14217" stop="14318"/>
              <exon start="14591" stop="15032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E357670" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAACTCAACACTCCCTTTTAACATTTTCGCTTCAGGTTTTTCTCCGACATAGCAATGAGGACATCCGTGGTGAGATTACTGGCTCGCAGAACCTCAACCGCCGGCCTCACACGCCGGGGATTTGCATCGGAATCTGCTCCGGACAGGAAAGTCGCTATTTTAGGTGCAGCTGGAGGGATCGGGCAGCCTCTGTCACTTCTCATGAAACTGAATCCTTTAGTTTCCAGACTTGCACTCTACGATATTGCCGGAACTCCTGGTGTTGCCGCTGATGTCAGCCATATCAACACCAGATCTGAG : ATTTTGGGTTATGCAGGAGAAGAACAGCTAGGGAAGGCTTTGGAGGGAGCTGATGTTGTCATTATTCCAGCTGGTGTGCCACGGAAACCTGGTATGACCCGTGATGATCTGTTCAACATTAATGCTGGTATTGTTAAGTCTCTTTGCACAGCTATTGCAAAGTATTGCCCTCAT : GCACTTGTCAATGTGATCAGCAACCCCGTGAATTCCACTGTCCCAATTGCATCTGAGGTGTTCAAGAAGGCTGGAACCTATGATGAGAAGAGACTCTTTGGAGTGACCACACTTGACGTTGTTAGGGCAAAGACTTTCTATGCTGGAAAAGCTAAAGTTAACGTTGCTG : ATGTCAATGTCCCTGTTGTTGGTGGTCATGCTGGCGTAACTATCCTCCCGTTATTTTCCCAA : GCCACTCCAAGTGCAAATTTGTCAAGTGAAGACATTCAGGCACTTACCAAGCGTACCCAAGATGGTGGCACTGAAGTTGTGGAGGCCAAGGCTGGAAAGGGTTCAGCCACCCTCTCGATGGC : CTATGCTGGTGCCATCTTCGCGGATGCTTGCTTGAAGGGACTGAATGGGGTTCCAGATGTTGTAGAGTGTTCATTCGTACAATCGACTGTGACAGACCTGCCATTCTTTGCATCCAAG : GTGAGACTTGGGAAAAATGGTGTGGAAGAAGTGTTAGGATTAGGCGCACTTTCAGACTACGAGAAAGAAGGACTTGAAGCTCTTAAACCAGAACTGAAATCGTCCATTGAGAAAGGAATCAAATTTGCCAACGCCTAAATTAATTAAACATAAAAAGAAAATGATACTTTGAAGTTTTGCCATCCCCATTTTCAGATACATTTGAGTTAATATTTTGCGAGCTCCTCACTGCCTGAGGCATTAGATTTATAGCTTTTATAGTCTAAGATAGTAGAGGTGTTAGATATATAGCCATATATTTTGGTAGAAAATAATCATTGGCAGACTTGTGATGGGTGCATTTTCTTTAAATAATCTACAAACGTTGAACCTTCTACTTCATTTATTACACATGCAGATATATTTGGTTAAAAGTAGTAAATTGGGTTTTCTTAATATTCTA</gDNA_template>
            <first_frame> A  T  Q  H  S  L  L  T  F  S  L  Q  V  F  L  R  H  S  N  E  D  I  R  G  E  I  T  G  S  Q  N  L  N  R  R  P  H  T  P  G  I  C  I  G  I  C  S  G  Q  E  S  R  Y  F  R  C  S  W  R  D  R  A  A  S  V  T  S  H  E  T  E  S  F  S  F  Q  T  C  T  L  R  Y  C  R  N  S  W  C  C  R  *  C  Q  P  Y  Q  H  Q  I  *   : D  F  G  L  C  R  R  R  T  A  R  E  G  F  G  G  S  *  C  C  H  Y  S  S  W  C  A  T  E  T  W  Y  D  P  *  *  S  V  Q  H  *  C  W  Y  C  *  V  S  L  H  S  Y  C  K  V  L  P  S   : C  T  C  Q  C  D  Q  Q  P  R  E  F  H  C  P  N  C  I  *  G  V  Q  E  G  W  N  L  *  *  E  E  T  L  W  S  D  H  T  *  R  C  *  G  K  D  F  L  C  W  K  S  *  S  *  R  C  * :   C  Q  C  P  C  C  W  W  S  C  W  R  N  Y  P  P  V  I  F  P   : S  H  S  K  C  K  F  V  K  *  R  H  S  G  T  Y  Q  A  Y  P  R  W  W  H  *  S  C  G  G  Q  G  W  K  G  F  S  H  P  L  D  G  :  L  C  W  C  H  L  R  G  C  L  L  E  G  T  E  W  G  S  R  C  C  R  V  F  I  R  T  I  D  C  D  R  P  A  I  L  C  I  Q   : G  E  T  W  E  K  W  C  G  R  S  V  R  I  R  R  T  F  R  L  R  E  R  R  T  *  S  S  *  T  R  T  E  I  V  H  *  E  R  N  Q  I  C  Q  R  L  N  *  L  N  I  K  R  K  *  Y  F  E  V  L  P  S  P  F  S  D  T  F  E  L  I  F  C  E  L  L  T  A  *  G  I  R  F  I  A  F  I  V  *  D  S  R  G  V  R  Y  I  A  I  Y  F  G  R  K  *  S  L  A  D  L  *  W  V  H  F  L  *  I  I  Y  K  R  *  T  F  Y  F  I  Y  Y  T  C  R  Y  I  W  L  K  V  V  N  W  V  F  L  I  F   </first_frame>
            <second_frame>  Q  L  N  T  P  F  *  H  F  R  F  R  F  F  S  D  I  A  M  R  T  S  V  V  R  L  L  A  R  R  T  S  T  A  G  L  T  R  R  G  F  A  S  E  S  A  P  D  R  K  V  A  I  L  G  A  A  G  G  I  G  Q  P  L  S  L  L  M  K  L  N  P  L  V  S  R  L  A  L  Y  D  I  A  G  T  P  G  V  A  A  D  V  S  H  I  N  T  R  S  E  :  I  L  G  Y  A  G  E  E  Q  L  G  K  A  L  E  G  A  D  V  V  I  I  P  A  G  V  P  R  K  P  G  M  T  R  D  D  L  F  N  I  N  A  G  I  V  K  S  L  C  T  A  I  A  K  Y  C  P  H  :  A  L  V  N  V  I  S  N  P  V  N  S  T  V  P  I  A  S  E  V  F  K  K  A  G  T  Y  D  E  K  R  L  F  G  V  T  T  L  D  V  V  R  A  K  T  F  Y  A  G  K  A  K  V  N  V  A   : D  V  N  V  P  V  V  G  G  H  A  G  V  T  I  L  P  L  F  S  Q  :  A  T  P  S  A  N  L  S  S  E  D  I  Q  A  L  T  K  R  T  Q  D  G  G  T  E  V  V  E  A  K  A  G  K  G  S  A  T  L  S  M  A :   Y  A  G  A  I  F  A  D  A  C  L  K  G  L  N  G  V  P  D  V  V  E  C  S  F  V  Q  S  T  V  T  D  L  P  F  F  A  S  K  :  V  R  L  G  K  N  G  V  E  E  V  L  G  L  G  A  L  S  D  Y  E  K  E  G  L  E  A  L  K  P  E  L  K  S  S  I  E  K  G  I  K  F  A  N  A  *  I  N  *  T  *  K  E  N  D  T  L  K  F  C  H  P  H  F  Q  I  H  L  S  *  Y  F  A  S  S  S  L  P  E  A  L  D  L  *  L  L  *  S  K  I  V  E  V  L  D  I  *  P  Y  I  L  V  E  N  N  H  W  Q  T  C  D  G  C  I  F  F  K  *  S  T  N  V  E  P  S  T  S  F  I  T  H  A  D  I  F  G  *  K  *  *  I  G  F  S  *  Y  S  </second_frame>
            <third_frame>   N  S  T  L  P  F  N  I  F  A  S  G  F  S  P  T  *  Q  *  G  H  P  W  *  D  Y  W  L  A  E  P  Q  P  P  A  S  H  A  G  D  L  H  R  N  L  L  R  T  G  K  S  L  F  *  V  Q  L  E  G  S  G  S  L  C  H  F  S  *  N  *  I  L  *  F  P  D  L  H  S  T  I  L  P  E  L  L  V  L  P  L  M  S  A  I  S  T  P  D  L  R :   F  W  V  M  Q  E  K  N  S  *  G  R  L  W  R  E  L  M  L  S  L  F  Q  L  V  C  H  G  N  L  V  *  P  V  M  I  C  S  T  L  M  L  V  L  L  S  L  F  A  Q  L  L  Q  S  I  A  L  M :   H  L  S  M  *  S  A  T  P  *  I  P  L  S  Q  L  H  L  R  C  S  R  R  L  E  P  M  M  R  R  D  S  L  E  *  P  H  L  T  L  L  G  Q  R  L  S  M  L  E  K  L  K  L  T  L  L  :  M  S  M  S  L  L  L  V  V  M  L  A  *  L  S  S  R  Y  F  P  K :   P  L  Q  V  Q  I  C  Q  V  K  T  F  R  H  L  P  S  V  P  K  M  V  A  L  K  L  W  R  P  R  L  E  R  V  Q  P  P  S  R  W   : P  M  L  V  P  S  S  R  M  L  A  *  R  D  *  M  G  F  Q  M  L  *  S  V  H  S  Y  N  R  L  *  Q  T  C  H  S  L  H  P  R :   *  D  L  G  K  M  V  W  K  K  C  *  D  *  A  H  F  Q  T  T  R  K  K  D  L  K  L  L  N  Q  N  *  N  R  P  L  R  K  E  S  N  L  P  T  P  K  L  I  K  H  K  K  K  M  I  L  *  S  F  A  I  P  I  F  R  Y  I  *  V  N  I  L  R  A  P  H  C  L  R  H  *  I  Y  S  F  Y  S  L  R  *  *  R  C  *  I  Y  S  H  I  F  W  *  K  I  I  I  G  R  L  V  M  G  A  F  S  L  N  N  L  Q  T  L  N  L  L  L  H  L  L  H  M  Q  I  Y  L  V  K  S  S  K  L  G  F  L  N  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="10443" stop="10721"/>
                    <exon start="12603" stop="12776"/>
                    <exon start="12876" stop="13044"/>
                    <exon start="13155" stop="13216"/>
                    <exon start="13349" stop="13470"/>
                    <exon start="14201" stop="14318"/>
                    <exon start="14591" stop="14728"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1059</number_coding_nucleotides>
                  <number_encoded_amino_acids>353</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HFRFRFFSDIAMRTSVVRLLARRTSTAGLTRRGFASESAPDRKVAILGAAGGIGQPLSLLMKLNPLVSRLALYDIAGTPGVAADVSHINTRSEILGYAGEEQLGKALEGADVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPHALVNVISNPVNSTVPIASEVFKKAGTYDEKRLFGVTTLDVVRAKTFYAGKAKVNVADVNVPVVGGHAGVTILPLFSQATPSANLSSEDIQALTKRTQDGGTEVVEAKAGKGSATLSMAYAGAIFADACLKGLNGVPDVVECSFVQSTVTDLPFFASKVRLGKNGVEEVLGLGALSDYEKEGLEALKPELKSSIEKGIKFANA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="21829" PGL_stop="22340"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21829" e_stop="22340"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="21829" e_stop="22340" e_length="512"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21829" stop="22340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276561" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGATCAAGAATCATCAAAGTGCTTTATCTCGATGATTATGAAAAAGAGTCAGACATCTCATTCTTAACATTATTTATGATGTTATTTCTATACAAGTGTTATTGGTTATGGTAGTCGTCATGTGAGAGATGTAGCACCTGTAAATTGCTCATCCAGTTTTGCTTATACATGTGCTGGGATTTTCAGTCATAGGGTTGTTCACAGTTAGAGAAGCAGGTAGGTTTGCTTTGTGCGATGTCGTGCAGCTGGTCTTGTAGAAACCAAGTATGATGGTAGGAATGCATACTGTAAAAATTATCAGGGAATCTTAAGTGGAAATGATAATGGGGGTGTGTACATATTAACCCATTCATCTTCCGGGCGACTTTTTACAAAGAATTTGTATGTATTTTCCCCTGAAGTAGTAGACACAACCATGTCCATCCCCTCTTGTATGTCCAAAAATGCTACTCTGTATGTTGCTCTTTTGACTTGGAATTAATAGAATATGAATCCTGAGGGATCTTGGTTG</gDNA_template>
            <first_frame> R  I  K  N  H  Q  S  A  L  S  R  *  L  *  K  R  V  R  H  L  I  L  N  I  I  Y  D  V  I  S  I  Q  V  L  L  V  M  V  V  V  M  *  E  M  *  H  L  *  I  A  H  P  V  L  L  I  H  V  L  G  F  S  V  I  G  L  F  T  V  R  E  A  G  R  F  A  L  C  D  V  V  Q  L  V  L  *  K  P  S  M  M  V  G  M  H  T  V  K  I  I  R  E  S  *  V  E  M  I  M  G  V  C  T  Y  *  P  I  H  L  P  G  D  F  L  Q  R  I  C  M  Y  F  P  L  K  *  *  T  Q  P  C  P  S  P  L  V  C  P  K  M  L  L  C  M  L  L  F  *  L  G  I  N  R  I  *  I  L  R  D  L  G   </first_frame>
            <second_frame>  G  S  R  I  I  K  V  L  Y  L  D  D  Y  E  K  E  S  D  I  S  F  L  T  L  F  M  M  L  F  L  Y  K  C  Y  W  L  W  *  S  S  C  E  R  C  S  T  C  K  L  L  I  Q  F  C  L  Y  M  C  W  D  F  Q  S  *  G  C  S  Q  L  E  K  Q  V  G  L  L  C  A  M  S  C  S  W  S  C  R  N  Q  V  *  W  *  E  C  I  L  *  K  L  S  G  N  L  K  W  K  *  *  W  G  C  V  H  I  N  P  F  I  F  R  A  T  F  Y  K  E  F  V  C  I  F  P  *  S  S  R  H  N  H  V  H  P  L  L  Y  V  Q  K  C  Y  S  V  C  C  S  F  D  L  E  L  I  E  Y  E  S  *  G  I  L  V  </second_frame>
            <third_frame>   D  Q  E  S  S  K  C  F  I  S  M  I  M  K  K  S  Q  T  S  H  S  *  H  Y  L  *  C  Y  F  Y  T  S  V  I  G  Y  G  S  R  H  V  R  D  V  A  P  V  N  C  S  S  S  F  A  Y  T  C  A  G  I  F  S  H  R  V  V  H  S  *  R  S  R  *  V  C  F  V  R  C  R  A  A  G  L  V  E  T  K  Y  D  G  R  N  A  Y  C  K  N  Y  Q  G  I  L  S  G  N  D  N  G  G  V  Y  I  L  T  H  S  S  S  G  R  L  F  T  K  N  L  Y  V  F  S  P  E  V  V  D  T  T  M  S  I  P  S  C  M  S  K  N  A  T  L  Y  V  A  L  L  T  W  N  *  *  N  M  N  P  E  G  S  W  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22050" stop="22310"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>258</number_coding_nucleotides>
                  <number_encoded_amino_acids>86</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VCFVRCRAAGLVETKYDGRNAYCKNYQGILSGNDNGGVYILTHSSSGRLFTKNLYVFSPEVVDTTMSIPSCMSKNATLYVALLTWN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="35304" PGL_stop="35952"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35304" e_stop="35952"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="35304" e_stop="35952" e_length="649"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35304" stop="35952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35305" stop="35689"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284788" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACGTCAGAAACTGGGAGTCTTGATAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTGAAAGAACCTGAAGAGAAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATTAGAGTATAGCTCAAGATCGGCCAAGGGGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTACGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGTCGTCTACTTACAAAGAAGCCACTTTAAGTCCTGATTCTGAAAAATGGTTTGCTGCTATGGGAGATGAGATGGAGCCCCTACACAAGAATCAGACATGGGATTTGGTCATACATCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGGAGAGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCTGAGTGTTACTAGCGATAGTTACACATCAGAATCTGGAGCTTGAACAGCTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</gDNA_template>
            <first_frame> Y  V  R  N  W  E  S  *  *  T  G  G  V  S  S  H  S  E  R  E  R  F  E  R  T  *  R  E  G  S  R  A  T  D  R  N  *  Y  S  R  I  Y  A  I  R  Y  P  L  E  Y  S  S  R  S  A  K  G  G  W  S  S  A  T  Y  E  V  W  F  *  G  H  G  G  L  R  T  A  G  C  *  R  G  R  Y  I  *  V  V  Y  L  Q  R  S  H  F  K  S  *  F  *  K  M  V  C  C  Y  G  R  *  D  G  A  P  T  Q  E  S  D  M  G  F  G  H  T  S  F  G  E  K  D  Y  Y  L  Q  M  G  F  Q  E  E  G  R  D  I  T  S  R  R  S  Q  V  *  S  Q  G  C  C  Q  R  F  Q  P  K  R  G  S  G  L  Q  *  D  L  L  T  S  G  Q  T  Y  F  H  L  S  V  T  S  D  S  Y  T  S  E  S  G  A  *  T  A  *  C  E  D  S  V  S  T  W  R  V  G  G  R  D  I  H  D  </first_frame>
            <second_frame>  T  S  E  T  G  S  L  D  K  Q  V  E  F  Q  V  I  Q  N  E  S  D  L  K  E  P  E  E  K  D  Q  E  P  Q  T  E  T  D  I  P  E  S  M  P  S  D  I  H  *  S  I  A  Q  D  R  P  R  G  V  G  V  R  P  P  T  R  Y  G  F  E  D  M  V  G  Y  A  L  Q  V  A  E  E  V  D  T  S  E  S  S  T  Y  K  E  A  T  L  S  P  D  S  E  K  W  F  A  A  M  G  D  E  M  E  P  L  H  K  N  Q  T  W  D  L  V  I  H  P  S  G  R  K  I  I  T  C  K  W  V  F  K  K  K  G  E  I  S  P  A  E  G  V  K  Y  K  A  R  V  V  A  R  G  F  N  Q  R  E  G  V  D  Y  N  E  I  F  S  P  V  V  R  H  T  S  I  *  V  L  L  A  I  V  T  H  Q  N  L  E  L  E  Q  L  D  V  K  T  A  F  L  H  G  E  L  E  E  E  I  Y  M  T </second_frame>
            <third_frame>   R  Q  K  L  G  V  L  I  N  R  W  S  F  K  S  F  R  T  R  A  I  *  K  N  L  K  R  R  I  K  S  H  R  Q  K  L  I  F  Q  N  L  C  H  Q  I  S  I  R  V  *  L  K  I  G  Q  G  G  L  E  F  G  H  L  R  G  M  V  L  R  T  W  W  V  T  H  C  R  L  L  K  R  *  I  H  L  S  R  L  L  T  K  K  P  L  *  V  L  I  L  K  N  G  L  L  L  W  E  M  R  W  S  P  Y  T  R  I  R  H  G  I  W  S  Y  I  L  R  G  E  R  L  L  L  A  N  G  F  S  R  R  R  E  R  Y  H  Q  Q  K  E  S  S  I  K  P  G  L  L  P  E  V  S  T  K  E  R  E  W  T  T  M  R  S  S  H  Q  W  S  D  I  L  P  S  E  C  Y  *  R  *  L  H  I  R  I  W  S  L  N  S  L  M  *  R  Q  R  F  Y  M  E  S  W  R  K  R  Y  T  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35449" stop="35850"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIAQDRPRGVGVRPPTRYGFEDMVGYALQVAEEVDTSESSTYKEATLSPDSEKWFAAMGDEMEPLHKNQTWDLVIHPSGRKIITCKWVFKKKGEISPAEGVKYKARVVARGFNQREGVDYNEIFSPVVRHTSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="35963" PGL_stop="36752"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35963" e_stop="36752"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.934"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="35963" e_stop="36752" e_length="790"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35963" stop="36752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343338" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTACAAAAGGTTTGACAACTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAAGGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGCTGATAGCTGCAAAGAAGAAGTATGCCATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGAAAGATTCTAGGGATGGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCTATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCATATTCATGGGACAACCAGGGAAAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTTAGTGCTTGGTTACTGGCTATTCTGATTCTGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTTAGTTGGAAGACAACTTT</gDNA_template>
            <first_frame> V  S  K  F  Q  G  R  K  I  T  S  A  S  *  R  S  P  Y  M  D  L  S  S  L  Q  G  S  G  T  K  G  L  T  T  I  W  *  S  W  A  I  L  G  A  H  M  I  V  V  S  T  T  I  G  S  R  M  I  H  S  S  I  W  C  F  M  *  M  I  C  *  *  L  Q  R  R  S  M  P  F  R  S  *  R  V  Y  L  V  L  S  L  R  *  R  I  W  E  P  L  E  R  F  *  G  W  R  E  G  N  F  S  C  H  R  E  A  T  F  R  R  S  W  R  G  L  A  C  L  H  L  S  L  L  I  P  P  V  L  P  I  S  I  S  L  P  C  S  L  H  S  Q  K  K  R  R  S  I  C  H  E  S  L  M  P  V  P  *  E  V  *  C  M  L  W  S  V  Q  G  Q  I  *  H  M  Q  S  V  *  *  A  Y  S  W  D  N  Q  G  K  N  I  G  R  L  *  R  E  F  S  G  T  L  E  V  H  L  T  L  V  S  F  M  E  V  I  L  S  A  W  L  L  A  I  L  I  L  T  M  L  E  M  L  T  Q  E  D  R  *  L  A  M  C  L  P  L  E  D  L  S  L  V  G  R  Q  L  </first_frame>
            <second_frame>  F  P  S  S  R  E  G  K  S  R  L  Q  V  E  E  V  L  I  W  T  *  A  V  S  K  A  V  V  Q  K  V  *  Q  L  Y  G  E  V  G  L  Y  S  E  L  I  *  L  L  C  L  L  Q  *  A  Q  G  *  F  I  H  L  S  G  A  L  C  R  *  Y  A  D  S  C  K  E  E  V  C  H  S  E  A  E  G  F  T  *  C  *  V  *  D  E  G  S  G  S  R  S  K  D  S  R  D  G  E  K  E  T  F  L  V  T  E  K  L  H  S  E  G  L  G  E  V  W  H  V  F  I  *  A  Y  *  Y  P  Q  C  C  Q  Y  P  S  H  C  H  V  R  S  T  V  R  R  R  E  G  V  Y  V  T  S  P  L  C  Q  C  R  R  K  F  D  V  C  Y  G  L  Y  K  A  R  F  S  T  C  S  Q  C  S  E  H  I  H  G  T  T  R  E  R  T  L  A  G  C  E  E  N  F  P  V  P  *  R  Y  I  *  R  W  S  H  L  W  R  *  Y  L  V  L  G  Y  W  L  F  *  F  *  L  C  W  R  C  *  H  K  K  I  D  D  W  L  C  V  Y  P  W  R  I  C  R  *  L  E  D  N  F </second_frame>
            <third_frame>   F  Q  V  P  G  K  E  N  H  V  C  K  L  K  K  S  L  Y  G  L  K  Q  S  P  R  Q  W  Y  K  R  F  D  N  Y  M  V  K  L  G  Y  T  R  S  S  Y  D  C  C  V  Y  Y  N  R  L  K  D  D  S  F  I  Y  L  V  L  Y  V  D  D  M  L  I  A  A  K  K  K  Y  A  I  Q  K  L  K  G  L  L  S  A  E  F  E  M  K  D  L  G  A  A  R  K  I  L  G  M  E  R  R  K  L  F  L  S  Q  R  S  Y  I  Q  K  V  L  A  R  F  G  M  S  S  S  K  P  I  D  T  P  S  A  A  N  I  H  L  T  A  M  F  A  P  Q  S  E  E  E  K  E  Y  M  S  R  V  P  Y  A  S  A  V  G  S  L  M  Y  A  M  V  C  T  R  P  D  L  A  H  A  V  S  V  V  S  I  F  M  G  Q  P  G  K  E  H  W  Q  A  V  K  R  I  F  R  Y  L  R  G  T  S  D  V  G  L  I  Y  G  G  D  T  *  C  L  V  T  G  Y  S  D  S  D  Y  A  G  D  V  D  T  R  R  S  M  T  G  Y  V  F  T  L  G  G  S  V  V  S  W  K  T  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35965" stop="36636"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>669</number_coding_nucleotides>
                  <number_encoded_amino_acids>223</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDNYMVKLGYTRSSYDCCVYYNRLKDDSFIYLVLYVDDMLIAAKKKYAIQKLKGLLSAEFEMKDLGAARKILGMERRKLFLSQRSYIQKVLARFGMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRPDLAHAVSVVSIFMGQPGKEHWQAVKRIFRYLRGTSDVGLIYGGDT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="61418" PGL_stop="41907"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="61418" e_stop="61013"/>
            <exon e_start="59497" e_stop="59283"/>
            <exon e_start="56087" e_stop="55937"/>
            <exon e_start="55653" e_stop="55632"/>
            <exon e_start="42305" e_stop="41907"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.896" acc_prob="0.934" e_score="0.967"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="0.974"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="61418" e_stop="61013" e_length="406"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="1.000">
            <gDNA_intron_boundary i_start="61012" i_stop="59498" i_length="1515"/>
          </intron>
          <exon e_serial="2" e_score="0.967">
            <gDNA_exon_boundary e_start="59497" e_stop="59283" e_length="215"/>
          </exon>
          <intron i_serial="2" don_prob="0.896" acc_prob="0.934">
            <gDNA_intron_boundary i_start="59282" i_stop="56088" i_length="3195"/>
          </intron>
          <exon e_serial="3" e_score="0.974">
            <gDNA_exon_boundary e_start="56087" e_stop="55937" e_length="151"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="55936" i_stop="55654" i_length="283"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="55653" e_stop="55632" e_length="22"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="55631" i_stop="42306" i_length="13326"/>
          </intron>
          <exon e_serial="5" e_score="0.912">
            <gDNA_exon_boundary e_start="42305" e_stop="41907" e_length="399"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61418" stop="61013"/>
              <exon start="59497" stop="59353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206134" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="61093" stop="61013"/>
              <exon start="59497" stop="59283"/>
              <exon start="56087" stop="56010"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59415" stop="59283"/>
              <exon start="56087" stop="55937"/>
              <exon start="55653" stop="55632"/>
              <exon start="42305" stop="41907"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E423521" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCAATGCTCTCTTTCGCTTTAGTCCATCTTCATCCTTCTTCTTCCCCAAACCCACAGTTCCATTTTCCCCACAAAAATCAAATTCTGCCAATTCAATCACTCAACTTTTCACCATTTACTGTAATACCCACAAAATTGCTGAGTAAACCCTCCTTCTCCCGCTTATTATCTTCGGTATCGTCGTCTTCTTTGGTTGCTGATGACTTTCAAGTGGAATTGGGTCGGTTATTGTCTTTGTTGCCGGAGGAAATGCGGCGAGGAGTTAGCGAACACCCGGAATATTCCAATTTAATTGAGGTGGTTATGGACTTAGGTCGTAAGCCACTTGCTCGCTTCCCTTCTGGAGATTTCATCTTATCCGATCAACCGATTACTTTGGGTGATCTTCAACAAGCTACCTCGCAG : GTTGGTGACTTTGCAGTTGACAATAGAGCTGGCATTAGCAGAACTTTACACCGAATTAGTGCTATTAGAAATCGGAAAGGTGCAATTATTGGTTTAACTTGTCGAGTTGGTCGTGCAATATCTGGAAGTGCAAACTCATTGCGAGATCTAGTTAAAGATGGTGCGTCTTTGTTGCTCATTGGTCCTCCTGGAGTAGGAAAAACAACTATTATCAG : GGACATAGCCAGGATGCTTGCAAATGATTATAGGAAGCGCGTAATGATTGTGGACACCTCTAATGAAATTGGTGGGGATGGTGATATACCTCATGCAGGAATTGGTAATGCTCGGCGGATGCAGGTTCCACATAATGATATGCAACACAAG : GTGCTGATAGAAGCAGTGGAAA : ATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATCATTCATAAGCTATTTAACACACTCTGAAGCCATTGAGCATATATACAAATGGTAAACTAGAAATTGCTGGGTTTTTTTTATATCAAATTATGGCCCATAATCAATTGTACTTGTTCAAATTCTCAGCCTTTTACTGCTACATAAT</gDNA_template>
            <first_frame> S  N  A  L  F  R  F  S  P  S  S  S  F  F  F  P  K  P  T  V  P  F  S  P  Q  K  S  N  S  A  N  S  I  T  Q  L  F  T  I  Y  C  N  T  H  K  I  A  E  *  T  L  L  L  P  L  I  I  F  G  I  V  V  F  F  G  C  *  *  L  S  S  G  I  G  S  V  I  V  F  V  A  G  G  N  A  A  R  S  *  R  T  P  G  I  F  Q  F  N  *  G  G  Y  G  L  R  S  *  A  T  C  S  L  P  F  W  R  F  H  L  I  R  S  T  D  Y  F  G  *  S  S  T  S  Y  L  A   : G  W  *  L  C  S  *  Q  *  S  W  H  *  Q  N  F  T  P  N  *  C  Y  *  K  S  E  R  C  N  Y  W  F  N  L  S  S  W  S  C  N  I  W  K  C  K  L  I  A  R  S  S  *  R  W  C  V  F  V  A  H  W  S  S  W  S  R  K  N  N  Y  Y  Q  :  G  H  S  Q  D  A  C  K  *  L  *  E  A  R  N  D  C  G  H  L  *  *  N  W  W  G  W  *  Y  T  S  C  R  N  W  *  C  S  A  D  A  G  S  T  *  *  Y  A  T  Q   : G  A  D  R  S  S  G  K :   S  E  R  I  G  T  G  M  D  L  R  L  R  I  L  P  F  T  S  A  S  D  E  D  G  H  D  S  E  G  V  D  D  E  S  E  V  D  E  L  L  F  R  P  N  A  E  S  N  G  S  A  Y  T  V  N  R  L  P  L  L  P  E  *  E  S  K  L  L  V  L  T  P  I  A  S  I  R  V  H  H  L  L  H  H  S  *  A  I  *  H  T  L  K  P  L  S  I  Y  T  N  G  K  L  E  I  A  G  F  F  L  Y  Q  I  M  A  H  N  Q  L  Y  L  F  K  F  S  A  F  Y  C  Y  I   </first_frame>
            <second_frame>  A  M  L  S  F  A  L  V  H  L  H  P  S  S  S  P  N  P  Q  F  H  F  P  H  K  N  Q  I  L  P  I  Q  S  L  N  F  S  P  F  T  V  I  P  T  K  L  L  S  K  P  S  F  S  R  L  L  S  S  V  S  S  S  S  L  V  A  D  D  F  Q  V  E  L  G  R  L  L  S  L  L  P  E  E  M  R  R  G  V  S  E  H  P  E  Y  S  N  L  I  E  V  V  M  D  L  G  R  K  P  L  A  R  F  P  S  G  D  F  I  L  S  D  Q  P  I  T  L  G  D  L  Q  Q  A  T  S  Q  :  V  G  D  F  A  V  D  N  R  A  G  I  S  R  T  L  H  R  I  S  A  I  R  N  R  K  G  A  I  I  G  L  T  C  R  V  G  R  A  I  S  G  S  A  N  S  L  R  D  L  V  K  D  G  A  S  L  L  L  I  G  P  P  G  V  G  K  T  T  I  I  R :   D  I  A  R  M  L  A  N  D  Y  R  K  R  V  M  I  V  D  T  S  N  E  I  G  G  D  G  D  I  P  H  A  G  I  G  N  A  R  R  M  Q  V  P  H  N  D  M  Q  H  K  :  V  L  I  E  A  V  E   : N  Q  S  E  L  E  Q  E  W  I  Y  G  F  G  F  S  L  S  P  V  H  P  M  K  T  V  T  I  V  K  E  L  M  M  R  V  K  L  M  N  Y  Y  S  G  R  M  L  N  Q  M  D  L  P  T  L  *  I  D  Y  L  Y  Y  L  N  K  K  V  N  C  W  F  *  H  Q  L  P  L  S  E  C  I  I  F  C  I  I  H  K  L  F  N  T  L  *  S  H  *  A  Y  I  Q  M  V  N  *  K  L  L  G  F  F  Y  I  K  L  W  P  I  I  N  C  T  C  S  N  S  Q  P  F  T  A  T  *  </second_frame>
            <third_frame>   Q  C  S  L  S  L  *  S  I  F  I  L  L  L  P  Q  T  H  S  S  I  F  P  T  K  I  K  F  C  Q  F  N  H  S  T  F  H  H  L  L  *  Y  P  Q  N  C  *  V  N  P  P  S  P  A  Y  Y  L  R  Y  R  R  L  L  W  L  L  M  T  F  K  W  N  W  V  G  Y  C  L  C  C  R  R  K  C  G  E  E  L  A  N  T  R  N  I  P  I  *  L  R  W  L  W  T  *  V  V  S  H  L  L  A  S  L  L  E  I  S  S  Y  P  I  N  R  L  L  W  V  I  F  N  K  L  P  R  R :   L  V  T  L  Q  L  T  I  E  L  A  L  A  E  L  Y  T  E  L  V  L  L  E  I  G  K  V  Q  L  L  V  *  L  V  E  L  V  V  Q  Y  L  E  V  Q  T  H  C  E  I  *  L  K  M  V  R  L  C  C  S  L  V  L  L  E  *  E  K  Q  L  L  S   : G  T  *  P  G  C  L  Q  M  I  I  G  S  A  *  *  L  W  T  P  L  M  K  L  V  G  M  V  I  Y  L  M  Q  E  L  V  M  L  G  G  C  R  F  H  I  M  I  C  N  T  R :   C  *  *  K  Q  W  K  :  I  R  A  N  W  N  R  N  G  F  T  A  S  D  S  P  F  H  Q  C  I  R  *  R  R  S  R  *  *  R  S  *  *  *  E  *  S  *  *  I  I  I  Q  A  E  C  *  I  K  W  I  C  L  H  C  K  *  I  T  S  T  T  *  I  R  K  *  I  V  G  F  N  T  N  C  L  Y  Q  S  A  S  S  F  A  S  F  I  S  Y  L  T  H  S  E  A  I  E  H  I  Y  K  W  *  T  R  N  C  W  V  F  F  I  S  N  Y  G  P  *  S  I  V  L  V  Q  I  L  S  L  L  L  L  H  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="61417" stop="61013"/>
                    <exon start="59497" stop="59283"/>
                    <exon start="56087" stop="55937"/>
                    <exon start="55653" stop="55632"/>
                    <exon start="42305" stop="42139"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>957</number_coding_nucleotides>
                  <number_encoded_amino_acids>319</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AMLSFALVHLHPSSSPNPQFHFPHKNQILPIQSLNFSPFTVIPTKLLSKPSFSRLLSSVSSSSLVADDFQVELGRLLSLLPEEMRRGVSEHPEYSNLIEVVMDLGRKPLARFPSGDFILSDQPITLGDLQQATSQVGDFAVDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSANSLRDLVKDGASLLLIGPPGVGKTTIIRDIARMLANDYRKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPHNDMQHKVLIEAVENQSELEQEWIYGFGFSLSPVHPMKTVTIVKELMMRVKLMNYYSGRMLNQMDLPTL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="55629" e_stop="55462"/>
            <exon e_start="54742" e_stop="54580"/>
            <exon e_start="54446" e_stop="54214"/>
            <exon e_start="53361" e_stop="53185"/>
            <exon e_start="53026" e_stop="52904"/>
            <exon e_start="42424" e_stop="41946"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.916" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.754" acc_prob="0.489" e_score="0.988"/>
          <exon-intron don_prob="0.987" acc_prob="0.294" e_score="0.986"/>
          <exon-intron don_prob="0.999" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="55629" e_stop="55462" e_length="168"/>
          </exon>
          <intron i_serial="1" don_prob="0.916" acc_prob="0.993">
            <gDNA_intron_boundary i_start="55461" i_stop="54743" i_length="719"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="54742" e_stop="54580" e_length="163"/>
          </exon>
          <intron i_serial="2" don_prob="0.754" acc_prob="0.489">
            <gDNA_intron_boundary i_start="54579" i_stop="54447" i_length="133"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="54446" e_stop="54214" e_length="233"/>
          </exon>
          <intron i_serial="3" don_prob="0.987" acc_prob="0.294">
            <gDNA_intron_boundary i_start="54213" i_stop="53362" i_length="852"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="53361" e_stop="53185" e_length="177"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.977">
            <gDNA_intron_boundary i_start="53184" i_stop="53027" i_length="158"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="53026" e_stop="52904" e_length="123"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="52903" i_stop="42425" i_length="10479"/>
          </intron>
          <exon e_serial="6" e_score="0.927">
            <gDNA_exon_boundary e_start="42424" e_stop="41946" e_length="479"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55629" stop="55462"/>
              <exon start="54742" stop="54580"/>
              <exon start="54446" stop="54294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54361" stop="54214"/>
              <exon start="53361" stop="53185"/>
              <exon start="53026" stop="52904"/>
              <exon start="42424" stop="42052"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53306" stop="53185"/>
              <exon start="53026" stop="52904"/>
              <exon start="42424" stop="41946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425036" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATATGCCACAAGTGATTGTAATCGATGAGATTGGTACTAAGCTTGAGGCAATGGCTGCAAGCACCATTGCACAACGAGGAATTCAGTTAGTTGCAACTGCTCATGGAGTAACAATAGAGAATTTAGTAATGAATCCTGCTTTAGAGATGCTGGTTGGAGGAGTACAG : AGTGTGACACTTGGGGATGAAGAGGCTAGCAGGCGACGCGTTCAGAAATCTGTTCTGGAGAGGAAAGGTCCATCATCTTTTAGCTGTGGGGTTGAGATAATCTCCAAGGCAGAATTGAGAGTTCACCCTGATTTAGAAGCAACAGTAGATGCAATTCTTGCAG : GACGTTACCCAAAATATGAAATTCGCAAGATAAATCCAGGATCGCAAGATGGAATTATGGAAATTTCATCCATCCAAGCACCATTAGATGAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTGAGCTCATCTCAGCAACAGGTCCGAGCATGGAAGGAGGTTCTGGTGAAAGTGAGGATGCCCTTTGCATTTTTCTATATGGG : ATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAG : ACTAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGCTTTGAGTTTCTCGAATCTGAAGCTAAAACTAATGAGTCTGAAAAGATTGATGCCTTAGAG : GAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATCATTCATAAGCTATTTAACACACTCTGAAGCCATTGAGCATATATACAAATGGTAAACTAGAAATTGCTGGGTTTTTTTTATATCAAATTATGGCCCATAATCAATT</gDNA_template>
            <first_frame> H  M  P  Q  V  I  V  I  D  E  I  G  T  K  L  E  A  M  A  A  S  T  I  A  Q  R  G  I  Q  L  V  A  T  A  H  G  V  T  I  E  N  L  V  M  N  P  A  L  E  M  L  V  G  G  V  Q  :  S  V  T  L  G  D  E  E  A  S  R  R  R  V  Q  K  S  V  L  E  R  K  G  P  S  S  F  S  C  G  V  E  I  I  S  K  A  E  L  R  V  H  P  D  L  E  A  T  V  D  A  I  L  A   : G  R  Y  P  K  Y  E  I  R  K  I  N  P  G  S  Q  D  G  I  M  E  I  S  S  I  Q  A  P  L  D  E  I  N  E  V  L  I  E  D  I  I  Q  I  N  G  G  I  P  D  S  T  E  L  I  S  A  T  G  P  S  M  E  G  G  S  G  E  S  E  D  A  L  C  I  F  L  Y  G  :  I  S  E  A  S  V  M  Q  G  I  K  Q  L  N  I  D  D  T  F  E  F  T  D  N  I  S  E  A  D  V  L  L  A  L  Q  S  K  L  K  K  N  S  R  I  Q  A  A  A  R  S  H  G  I  P  I  Y  V  T  K  :  T  S  S  S  T  Q  L  T  K  A  M  Q  A  L  I  S  D  F  A  D  G  F  E  F  L  E  S  E  A  K  T  N  E  S  E  K  I  D  A  L  E  :  E  A  R  I  A  M  E  R  V  V  I  P  K  G  E  P  V  E  L  L  P  R  P  S  N  I  I  L  L  Q  K  D  L  V  R  K  Y  K  L  K  S  E  R  I  G  T  G  M  D  L  R  L  R  I  L  P  F  T  S  A  S  D  E  D  G  H  D  S  E  G  V  D  D  E  S  E  V  D  E  L  L  F  R  P  N  A  E  S  N  G  S  A  Y  T  V  N  R  L  P  L  L  P  E  *  E  S  K  L  L  V  L  T  P  I  A  S  I  R  V  H  H  L  L  H  H  S  *  A  I  *  H  T  L  K  P  L  S  I  Y  T  N  G  K  L  E  I  A  G  F  F  L  Y  Q  I  M  A  H  N  Q   </first_frame>
            <second_frame>  I  C  H  K  *  L  *  S  M  R  L  V  L  S  L  R  Q  W  L  Q  A  P  L  H  N  E  E  F  S  *  L  Q  L  L  M  E  *  Q  *  R  I  *  *  *  I  L  L  *  R  C  W  L  E  E  Y  R :   V  *  H  L  G  M  K  R  L  A  G  D  A  F  R  N  L  F  W  R  G  K  V  H  H  L  L  A  V  G  L  R  *  S  P  R  Q  N  *  E  F  T  L  I  *  K  Q  Q  *  M  Q  F  L  Q  :  D  V  T  Q  N  M  K  F  A  R  *  I  Q  D  R  K  M  E  L  W  K  F  H  P  S  K  H  H  *  M  K  *  M  K  F  *  L  K  I  *  S  R  L  M  E  V  Y  L  I  Q  L  S  S  S  Q  Q  Q  V  R  A  W  K  E  V  L  V  K  V  R  M  P  F  A  F  F  Y  M  G :   S  Q  R  Q  V  *  C  K  G  *  N  S  L  T  L  T  I  R  L  S  L  L  I  I  S  V  K  Q  M  C  Y  L  L  C  S  P  S  L  R  K  I  L  G  F  K  Q  L  Q  D  L  T  A  F  L  F  M  *  Q  R :   L  A  P  Q  H  S  *  Q  R  L  C  R  H  *  S  V  I  L  L  M  A  L  S  F  S  N  L  K  L  K  L  M  S  L  K  R  L  M  P  *  R :   R  L  E  *  P  W  S  E  W  *  F  R  K  G  N  L  L  S  Y  S  L  G  H  Q  I  L  Y  C  F  R  R  I  L  L  E  S  T  S  *  N  Q  S  E  L  E  Q  E  W  I  Y  G  F  G  F  S  L  S  P  V  H  P  M  K  T  V  T  I  V  K  E  L  M  M  R  V  K  L  M  N  Y  Y  S  G  R  M  L  N  Q  M  D  L  P  T  L  *  I  D  Y  L  Y  Y  L  N  K  K  V  N  C  W  F  *  H  Q  L  P  L  S  E  C  I  I  F  C  I  I  H  K  L  F  N  T  L  *  S  H  *  A  Y  I  Q  M  V  N  *  K  L  L  G  F  F  Y  I  K  L  W  P  I  I  N  </second_frame>
            <third_frame>   Y  A  T  S  D  C  N  R  *  D  W  Y  *  A  *  G  N  G  C  K  H  H  C  T  T  R  N  S  V  S  C  N  C  S  W  S  N  N  R  E  F  S  N  E  S  C  F  R  D  A  G  W  R  S  T   : E  C  D  T  W  G  *  R  G  *  Q  A  T  R  S  E  I  C  S  G  E  E  R  S  I  I  F  *  L  W  G  *  D  N  L  Q  G  R  I  E  S  S  P  *  F  R  S  N  S  R  C  N  S  C  R :   T  L  P  K  I  *  N  S  Q  D  K  S  R  I  A  R  W  N  Y  G  N  F  I  H  P  S  T  I  R  *  N  K  *  S  F  D  *  R  Y  N  P  D  *  W  R  Y  T  *  F  N  *  A  H  L  S  N  R  S  E  H  G  R  R  F  W  *  K  *  G  C  P  L  H  F  S  I  W   : D  L  R  G  K  C  D  A  R  D  K  T  A  *  H  *  R  Y  V  *  V  Y  *  *  Y  Q  *  S  R  C  A  T  C  S  A  V  Q  A  *  E  K  F  S  D  S  S  S  C  K  I  S  R  H  S  Y  L  C  D  K   : D  *  L  L  N  T  A  D  K  G  Y  A  G  I  N  Q  *  F  C  *  W  L  *  V  S  R  I  *  S  *  N  *  *  V  *  K  D  *  C  L  R   : G  G  S  N  S  H  G  A  S  G  N  S  E  R  G  T  C  *  A  T  P  *  A  I  K  Y  Y  T  A  S  E  G  S  C  *  K  V  Q  A  K  I  R  A  N  W  N  R  N  G  F  T  A  S  D  S  P  F  H  Q  C  I  R  *  R  R  S  R  *  *  R  S  *  *  *  E  *  S  *  *  I  I  I  Q  A  E  C  *  I  K  W  I  C  L  H  C  K  *  I  T  S  T  T  *  I  R  K  *  I  V  G  F  N  T  N  C  L  Y  Q  S  A  S  S  F  A  S  F  I  S  Y  L  T  H  S  E  A  I  E  H  I  Y  K  W  *  T  R  N  C  W  V  F  F  I  S  N  Y  G  P  *  S  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55629" stop="55462"/>
                    <exon start="54742" stop="54580"/>
                    <exon start="54446" stop="54214"/>
                    <exon start="53361" stop="53185"/>
                    <exon start="53026" stop="52904"/>
                    <exon start="42424" stop="42113"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1173</number_coding_nucleotides>
                  <number_encoded_amino_acids>391</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLVMNPALEMLVGGVQSVTLGDEEASRRRVQKSVLERKGPSSFSCGVEIISKAELRVHPDLEATVDAILAGRYPKYEIRKINPGSQDGIMEISSIQAPLDEINEVLIEDIIQINGGIPDSTELISATGPSMEGGSGESEDALCIFLYGISEASVMQGIKQLNIDDTFEFTDNISEADVLLALQSKLKKNSRIQAAARSHGIPIYVTKTSSSTQLTKAMQALISDFADGFEFLESEAKTNESEKIDALEEARIAMERVVIPKGEPVELLPRPSNIILLQKDLVRKYKLKSERIGTGMDLRLRILPFTSASDEDGHDSEGVDDESEVDELLFRPNAESNGSAYTVNRLPLLPE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="54052" e_stop="53185"/>
            <exon e_start="53026" e_stop="52904"/>
            <exon e_start="42424" e_stop="41946"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.977" e_score="0.991"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.967"/>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="54052" e_stop="53185" e_length="868"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.977">
            <gDNA_intron_boundary i_start="53184" i_stop="53027" i_length="158"/>
          </intron>
          <exon e_serial="2" e_score="0.967">
            <gDNA_exon_boundary e_start="53026" e_stop="52904" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="52903" i_stop="42425" i_length="10479"/>
          </intron>
          <exon e_serial="3" e_score="0.927">
            <gDNA_exon_boundary e_start="42424" e_stop="41946" e_length="479"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54052" stop="53247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53306" stop="53185"/>
              <exon start="53026" stop="52904"/>
              <exon start="42424" stop="41946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425036" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAAAGAGAATCAATTTCCAAAAAGTGAAATACCTCCTAGTACATGATGGTTCTGCATTCGTATACTATTGTTACTTAATTTGCTGCAAAGTTAGTCTCTTTCAATTTGTGGATCTAATAAACCTGATTTGATGCTTCTCCAGTATCCTAATAGTCTCCTTGTTTTCCTATCTTTTCATGTTAAGGTCCCACATACCCCCTTCCTCTGCTGGAAGTGCTTGGTGGCCCCAAACATGAAGTGTAGAAGTATCGAGCAGGAATGATTTTTTTCTTTTGGCTGACTATTCAAATTCAAGCCCCAGCAATTTTTTTTTTTTAAAAAATATTCCTGGAAGAAAAGATCACATGCTTGAATTTTGTCACTCCTTGTATAGGCGGAAAAAGAGTAGATGTTCTTCTATGCTTTAGCTCATTAAGATTTCACCCATTAAAATACTTGTCAAAGACACATTTTAGAATTACAGAGCCTCCTCTTCAAACTTTATATCATCTAATGAAGCATTTGAGTTAATCCACTCTCTTTTCCTTTTAGTTCTCTAAATTTTTTAACTTCTATGAGGGAAAGTGTAGCATAGAATAAGAGATTCTTATGAAGAAAACGTAATAGAAGAGAGGAAAAAACACGATAAAGCTCCATCAGCTTCTATATGGAAACATCTACGTGGAACTCATATTTGAGCAGGTATTGTAGATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAG : ACTAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGCTTTGAGTTTCTCGAATCTGAAGCTAAAACTAATGAGTCTGAAAAGATTGATGCCTTAGAG : GAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATCATTCATAAGCTATTTAACACACTCTGAAGCCATTGAGCATATATACAAATGGTAAACTAGAAATTGCTGGGTTTTTTTTATATCAAATTATGGCCCATAATCAATT</gDNA_template>
            <first_frame> R  K  R  I  N  F  Q  K  V  K  Y  L  L  V  H  D  G  S  A  F  V  Y  Y  C  Y  L  I  C  C  K  V  S  L  F  Q  F  V  D  L  I  N  L  I  *  C  F  S  S  I  L  I  V  S  L  F  S  Y  L  F  M  L  R  S  H  I  P  P  S  S  A  G  S  A  W  W  P  Q  T  *  S  V  E  V  S  S  R  N  D  F  F  L  L  A  D  Y  S  N  S  S  P  S  N  F  F  F  L  K  N  I  P  G  R  K  D  H  M  L  E  F  C  H  S  L  Y  R  R  K  K  S  R  C  S  S  M  L  *  L  I  K  I  S  P  I  K  I  L  V  K  D  T  F  *  N  Y  R  A  S  S  S  N  F  I  S  S  N  E  A  F  E  L  I  H  S  L  F  L  L  V  L  *  I  F  *  L  L  *  G  K  V  *  H  R  I  R  D  S  Y  E  E  N  V  I  E  E  R  K  K  H  D  K  A  P  S  A  S  I  W  K  H  L  R  G  T  H  I  *  A  G  I  V  D  L  R  G  K  C  D  A  R  D  K  T  A  *  H  *  R  Y  V  *  V  Y  *  *  Y  Q  *  S  R  C  A  T  C  S  A  V  Q  A  *  E  K  F  S  D  S  S  S  C  K  I  S  R  H  S  Y  L  C  D  K   : D  *  L  L  N  T  A  D  K  G  Y  A  G  I  N  Q  *  F  C  *  W  L  *  V  S  R  I  *  S  *  N  *  *  V  *  K  D  *  C  L  R   : G  G  S  N  S  H  G  A  S  G  N  S  E  R  G  T  C  *  A  T  P  *  A  I  K  Y  Y  T  A  S  E  G  S  C  *  K  V  Q  A  K  I  R  A  N  W  N  R  N  G  F  T  A  S  D  S  P  F  H  Q  C  I  R  *  R  R  S  R  *  *  R  S  *  *  *  E  *  S  *  *  I  I  I  Q  A  E  C  *  I  K  W  I  C  L  H  C  K  *  I  T  S  T  T  *  I  R  K  *  I  V  G  F  N  T  N  C  L  Y  Q  S  A  S  S  F  A  S  F  I  S  Y  L  T  H  S  E  A  I  E  H  I  Y  K  W  *  T  R  N  C  W  V  F  F  I  S  N  Y  G  P  *  S  I </first_frame>
            <second_frame>  E  R  E  S  I  S  K  K  *  N  T  S  *  Y  M  M  V  L  H  S  Y  T  I  V  T  *  F  A  A  K  L  V  S  F  N  L  W  I  *  *  T  *  F  D  A  S  P  V  S  *  *  S  P  C  F  P  I  F  S  C  *  G  P  T  Y  P  L  P  L  L  E  V  L  G  G  P  K  H  E  V  *  K  Y  R  A  G  M  I  F  F  F  W  L  T  I  Q  I  Q  A  P  A  I  F  F  F  *  K  I  F  L  E  E  K  I  T  C  L  N  F  V  T  P  C  I  G  G  K  R  V  D  V  L  L  C  F  S  S  L  R  F  H  P  L  K  Y  L  S  K  T  H  F  R  I  T  E  P  P  L  Q  T  L  Y  H  L  M  K  H  L  S  *  S  T  L  F  S  F  *  F  S  K  F  F  N  F  Y  E  G  K  C  S  I  E  *  E  I  L  M  K  K  T  *  *  K  R  G  K  N  T  I  K  L  H  Q  L  L  Y  G  N  I  Y  V  E  L  I  F  E  Q  V  L  *  I  S  E  A  S  V  M  Q  G  I  K  Q  L  N  I  D  D  T  F  E  F  T  D  N  I  S  E  A  D  V  L  L  A  L  Q  S  K  L  K  K  N  S  R  I  Q  A  A  A  R  S  H  G  I  P  I  Y  V  T  K  :  T  S  S  S  T  Q  L  T  K  A  M  Q  A  L  I  S  D  F  A  D  G  F  E  F  L  E  S  E  A  K  T  N  E  S  E  K  I  D  A  L  E  :  E  A  R  I  A  M  E  R  V  V  I  P  K  G  E  P  V  E  L  L  P  R  P  S  N  I  I  L  L  Q  K  D  L  V  R  K  Y  K  L  K  S  E  R  I  G  T  G  M  D  L  R  L  R  I  L  P  F  T  S  A  S  D  E  D  G  H  D  S  E  G  V  D  D  E  S  E  V  D  E  L  L  F  R  P  N  A  E  S  N  G  S  A  Y  T  V  N  R  L  P  L  L  P  E  *  E  S  K  L  L  V  L  T  P  I  A  S  I  R  V  H  H  L  L  H  H  S  *  A  I  *  H  T  L  K  P  L  S  I  Y  T  N  G  K  L  E  I  A  G  F  F  L  Y  Q  I  M  A  H  N  Q   </second_frame>
            <third_frame>   K  E  N  Q  F  P  K  S  E  I  P  P  S  T  *  W  F  C  I  R  I  L  L  L  L  N  L  L  Q  S  *  S  L  S  I  C  G  S  N  K  P  D  L  M  L  L  Q  Y  P  N  S  L  L  V  F  L  S  F  H  V  K  V  P  H  T  P  F  L  C  W  K  C  L  V  A  P  N  M  K  C  R  S  I  E  Q  E  *  F  F  S  F  G  *  L  F  K  F  K  P  Q  Q  F  F  F  F  K  K  Y  S  W  K  K  R  S  H  A  *  I  L  S  L  L  V  *  A  E  K  E  *  M  F  F  Y  A  L  A  H  *  D  F  T  H  *  N  T  C  Q  R  H  I  L  E  L  Q  S  L  L  F  K  L  Y  I  I  *  *  S  I  *  V  N  P  L  S  F  P  F  S  S  L  N  F  L  T  S  M  R  E  S  V  A  *  N  K  R  F  L  *  R  K  R  N  R  R  E  E  K  T  R  *  S  S  I  S  F  Y  M  E  T  S  T  W  N  S  Y  L  S  R  Y  C  R  S  Q  R  Q  V  *  C  K  G  *  N  S  L  T  L  T  I  R  L  S  L  L  I  I  S  V  K  Q  M  C  Y  L  L  C  S  P  S  L  R  K  I  L  G  F  K  Q  L  Q  D  L  T  A  F  L  F  M  *  Q  R :   L  A  P  Q  H  S  *  Q  R  L  C  R  H  *  S  V  I  L  L  M  A  L  S  F  S  N  L  K  L  K  L  M  S  L  K  R  L  M  P  *  R :   R  L  E  *  P  W  S  E  W  *  F  R  K  G  N  L  L  S  Y  S  L  G  H  Q  I  L  Y  C  F  R  R  I  L  L  E  S  T  S  *  N  Q  S  E  L  E  Q  E  W  I  Y  G  F  G  F  S  L  S  P  V  H  P  M  K  T  V  T  I  V  K  E  L  M  M  R  V  K  L  M  N  Y  Y  S  G  R  M  L  N  Q  M  D  L  P  T  L  *  I  D  Y  L  Y  Y  L  N  K  K  V  N  C  W  F  *  H  Q  L  P  L  S  E  C  I  I  F  C  I  I  H  K  L  F  N  T  L  *  S  H  *  A  Y  I  Q  M  V  N  *  K  L  L  G  F  F  Y  I  K  L  W  P  I  I  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53361" stop="53185"/>
                    <exon start="53026" stop="52904"/>
                    <exon start="42424" stop="42113"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISEASVMQGIKQLNIDDTFEFTDNISEADVLLALQSKLKKNSRIQAAARSHGIPIYVTKTSSSTQLTKAMQALISDFADGFEFLESEAKTNESEKIDALEEARIAMERVVIPKGEPVELLPRPSNIILLQKDLVRKYKLKSERIGTGMDLRLRILPFTSASDEDGHDSEGVDDESEVDELLFRPNAESNGSAYTVNRLPLLPE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="54822" e_stop="54580"/>
            <exon e_start="54446" e_stop="54214"/>
            <exon e_start="53370" e_stop="53185"/>
            <exon e_start="53026" e_stop="52904"/>
            <exon e_start="42424" e_stop="41946"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.754" acc_prob="0.489" e_score="0.967"/>
          <exon-intron don_prob="0.987" acc_prob="0.788" e_score="0.987"/>
          <exon-intron don_prob="0.999" acc_prob="0.977" e_score="0.978"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.967"/>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="54822" e_stop="54580" e_length="243"/>
          </exon>
          <intron i_serial="1" don_prob="0.754" acc_prob="0.489">
            <gDNA_intron_boundary i_start="54579" i_stop="54447" i_length="133"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="54446" e_stop="54214" e_length="233"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.788">
            <gDNA_intron_boundary i_start="54213" i_stop="53371" i_length="843"/>
          </intron>
          <exon e_serial="3" e_score="0.978">
            <gDNA_exon_boundary e_start="53370" e_stop="53185" e_length="186"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.977">
            <gDNA_intron_boundary i_start="53184" i_stop="53027" i_length="158"/>
          </intron>
          <exon e_serial="4" e_score="0.967">
            <gDNA_exon_boundary e_start="53026" e_stop="52904" e_length="123"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="52903" i_stop="42425" i_length="10479"/>
          </intron>
          <exon e_serial="5" e_score="0.927">
            <gDNA_exon_boundary e_start="42424" e_stop="41946" e_length="479"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54822" stop="54580"/>
              <exon start="54446" stop="54214"/>
              <exon start="53370" stop="53185"/>
              <exon start="53026" stop="52940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E453747" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53306" stop="53185"/>
              <exon start="53026" stop="52904"/>
              <exon start="42424" stop="41946"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425036" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTTACTCTCATGCACTATTGGATGACTGGAAGCTGTTTGAGGTTTATAGTATAGTTGCATAACTTATTTCTTTGTCAGAGTGTGACACTTGGGGATGAAGAGGCTAGCAGGCGACGCGTTCAGAAATCTGTTCTGGAGAGGAAAGGTCCATCATCTTTTAGCTGTGGGGTTGAGATAATCTCCAAGGCAGAATTGAGAGTTCACCCTGATTTAGAAGCAACAGTAGATGCAATTCTTGCAG : GACGTTACCCAAAATATGAAATTCGCAAGATAAATCCAGGATCGCAAGATGGAATTATGGAAATTTCATCCATCCAAGCACCATTAGATGAAATAAATGAAGTTTTGATTGAAGATATAATCCAGATTAATGGAGGTATACCTGATTCAACTGAGCTCATCTCAGCAACAGGTCCGAGCATGGAAGGAGGTTCTGGTGAAAGTGAGGATGCCCTTTGCATTTTTCTATATGGG : GTATTGTAGATCTCAGAGGCAAGTGTGATGCAAGGGATAAAACAGCTTAACATTGACGATACGTTTGAGTTTACTGATAATATCAGTGAAGCAGATGTGCTACTTGCTCTGCAGTCCAAGCTTAAGAAAAATTCTCGGATTCAAGCAGCTGCAAGATCTCACGGCATTCCTATTTATGTGACAAAG : ACTAGCTCCTCAACACAGCTGACAAAGGCTATGCAGGCATTAATCAGTGATTTTGCTGATGGCTTTGAGTTTCTCGAATCTGAAGCTAAAACTAATGAGTCTGAAAAGATTGATGCCTTAGAG : GAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATCATTCATAAGCTATTTAACACACTCTGAAGCCATTGAGCATATATACAAATGGTAAACTAGAAATTGCTGGGTTTTTTTTATATCAAATTATGGCCCATAATCAATT</gDNA_template>
            <first_frame> V  L  L  S  C  T  I  G  *  L  E  A  V  *  G  L  *  Y  S  C  I  T  Y  F  F  V  R  V  *  H  L  G  M  K  R  L  A  G  D  A  F  R  N  L  F  W  R  G  K  V  H  H  L  L  A  V  G  L  R  *  S  P  R  Q  N  *  E  F  T  L  I  *  K  Q  Q  *  M  Q  F  L  Q  :  D  V  T  Q  N  M  K  F  A  R  *  I  Q  D  R  K  M  E  L  W  K  F  H  P  S  K  H  H  *  M  K  *  M  K  F  *  L  K  I  *  S  R  L  M  E  V  Y  L  I  Q  L  S  S  S  Q  Q  Q  V  R  A  W  K  E  V  L  V  K  V  R  M  P  F  A  F  F  Y  M  G :   Y  C  R  S  Q  R  Q  V  *  C  K  G  *  N  S  L  T  L  T  I  R  L  S  L  L  I  I  S  V  K  Q  M  C  Y  L  L  C  S  P  S  L  R  K  I  L  G  F  K  Q  L  Q  D  L  T  A  F  L  F  M  *  Q  R :   L  A  P  Q  H  S  *  Q  R  L  C  R  H  *  S  V  I  L  L  M  A  L  S  F  S  N  L  K  L  K  L  M  S  L  K  R  L  M  P  *  R :   R  L  E  *  P  W  S  E  W  *  F  R  K  G  N  L  L  S  Y  S  L  G  H  Q  I  L  Y  C  F  R  R  I  L  L  E  S  T  S  *  N  Q  S  E  L  E  Q  E  W  I  Y  G  F  G  F  S  L  S  P  V  H  P  M  K  T  V  T  I  V  K  E  L  M  M  R  V  K  L  M  N  Y  Y  S  G  R  M  L  N  Q  M  D  L  P  T  L  *  I  D  Y  L  Y  Y  L  N  K  K  V  N  C  W  F  *  H  Q  L  P  L  S  E  C  I  I  F  C  I  I  H  K  L  F  N  T  L  *  S  H  *  A  Y  I  Q  M  V  N  *  K  L  L  G  F  F  Y  I  K  L  W  P  I  I  N  </first_frame>
            <second_frame>  F  Y  S  H  A  L  L  D  D  W  K  L  F  E  V  Y  S  I  V  A  *  L  I  S  L  S  E  C  D  T  W  G  *  R  G  *  Q  A  T  R  S  E  I  C  S  G  E  E  R  S  I  I  F  *  L  W  G  *  D  N  L  Q  G  R  I  E  S  S  P  *  F  R  S  N  S  R  C  N  S  C  R :   T  L  P  K  I  *  N  S  Q  D  K  S  R  I  A  R  W  N  Y  G  N  F  I  H  P  S  T  I  R  *  N  K  *  S  F  D  *  R  Y  N  P  D  *  W  R  Y  T  *  F  N  *  A  H  L  S  N  R  S  E  H  G  R  R  F  W  *  K  *  G  C  P  L  H  F  S  I  W   : G  I  V  D  L  R  G  K  C  D  A  R  D  K  T  A  *  H  *  R  Y  V  *  V  Y  *  *  Y  Q  *  S  R  C  A  T  C  S  A  V  Q  A  *  E  K  F  S  D  S  S  S  C  K  I  S  R  H  S  Y  L  C  D  K   : D  *  L  L  N  T  A  D  K  G  Y  A  G  I  N  Q  *  F  C  *  W  L  *  V  S  R  I  *  S  *  N  *  *  V  *  K  D  *  C  L  R   : G  G  S  N  S  H  G  A  S  G  N  S  E  R  G  T  C  *  A  T  P  *  A  I  K  Y  Y  T  A  S  E  G  S  C  *  K  V  Q  A  K  I  R  A  N  W  N  R  N  G  F  T  A  S  D  S  P  F  H  Q  C  I  R  *  R  R  S  R  *  *  R  S  *  *  *  E  *  S  *  *  I  I  I  Q  A  E  C  *  I  K  W  I  C  L  H  C  K  *  I  T  S  T  T  *  I  R  K  *  I  V  G  F  N  T  N  C  L  Y  Q  S  A  S  S  F  A  S  F  I  S  Y  L  T  H  S  E  A  I  E  H  I  Y  K  W  *  T  R  N  C  W  V  F  F  I  S  N  Y  G  P  *  S  I </second_frame>
            <third_frame>   F  T  L  M  H  Y  W  M  T  G  S  C  L  R  F  I  V  *  L  H  N  L  F  L  C  Q  S  V  T  L  G  D  E  E  A  S  R  R  R  V  Q  K  S  V  L  E  R  K  G  P  S  S  F  S  C  G  V  E  I  I  S  K  A  E  L  R  V  H  P  D  L  E  A  T  V  D  A  I  L  A   : G  R  Y  P  K  Y  E  I  R  K  I  N  P  G  S  Q  D  G  I  M  E  I  S  S  I  Q  A  P  L  D  E  I  N  E  V  L  I  E  D  I  I  Q  I  N  G  G  I  P  D  S  T  E  L  I  S  A  T  G  P  S  M  E  G  G  S  G  E  S  E  D  A  L  C  I  F  L  Y  G  :  V  L  *  I  S  E  A  S  V  M  Q  G  I  K  Q  L  N  I  D  D  T  F  E  F  T  D  N  I  S  E  A  D  V  L  L  A  L  Q  S  K  L  K  K  N  S  R  I  Q  A  A  A  R  S  H  G  I  P  I  Y  V  T  K  :  T  S  S  S  T  Q  L  T  K  A  M  Q  A  L  I  S  D  F  A  D  G  F  E  F  L  E  S  E  A  K  T  N  E  S  E  K  I  D  A  L  E  :  E  A  R  I  A  M  E  R  V  V  I  P  K  G  E  P  V  E  L  L  P  R  P  S  N  I  I  L  L  Q  K  D  L  V  R  K  Y  K  L  K  S  E  R  I  G  T  G  M  D  L  R  L  R  I  L  P  F  T  S  A  S  D  E  D  G  H  D  S  E  G  V  D  D  E  S  E  V  D  E  L  L  F  R  P  N  A  E  S  N  G  S  A  Y  T  V  N  R  L  P  L  L  P  E  *  E  S  K  L  L  V  L  T  P  I  A  S  I  R  V  H  H  L  L  H  H  S  *  A  I  *  H  T  L  K  P  L  S  I  Y  T  N  G  K  L  E  I  A  G  F  F  L  Y  Q  I  M  A  H  N  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53361" stop="53185"/>
                    <exon start="53026" stop="52904"/>
                    <exon start="42424" stop="42113"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISEASVMQGIKQLNIDDTFEFTDNISEADVLLALQSKLKKNSRIQAAARSHGIPIYVTKTSSSTQLTKAMQALISDFADGFEFLESEAKTNESEKIDALEEARIAMERVVIPKGEPVELLPRPSNIILLQKDLVRKYKLKSERIGTGMDLRLRILPFTSASDEDGHDSEGVDDESEVDELLFRPNAESNGSAYTVNRLPLLPE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54766" stop="54580"/>
                    <exon start="54446" stop="54214"/>
                    <exon start="53370" stop="53362"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>426</number_coding_nucleotides>
                  <number_encoded_amino_acids>142</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LHNLFLCQSVTLGDEEASRRRVQKSVLERKGPSSFSCGVEIISKAELRVHPDLEATVDAILAGRYPKYEIRKINPGSQDGIMEISSIQAPLDEINEVLIEDIIQINGGIPDSTELISATGPSMEGGSGESEDALCIFLYGVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="44900" e_stop="44851"/>
            <exon e_start="42424" e_stop="41996"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="0.920"/>
          <exon-only e_score="0.937"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.920">
            <gDNA_exon_boundary e_start="44900" e_stop="44851" e_length="50"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="44850" i_stop="42425" i_length="2426"/>
          </intron>
          <exon e_serial="2" e_score="0.937">
            <gDNA_exon_boundary e_start="42424" e_stop="41996" e_length="429"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44900" stop="44851"/>
              <exon start="42424" stop="41996"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E428384" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGTAGAACTTTGGCCTTGTTCAGTCTTCTGCTCATTAGTATGAACTTGAG : GAGGCTCGAATAGCCATGGAGCGAGTGGTAATTCCGAAAGGGGAACCTGTTGAGCTACTCCCTAGGCCATCAAATATTATACTGCTTCAGAAGGATCTTGTTAGAAAGTACAAGCTAAAATCAGAGCGAATTGGAACAGGAATGGATTTACGGCTTCGGATTCTCCCTTTCACCAGTGCATCCGATGAAGACGGTCACGATAGTGAAGGAGTTGATGATGAGAGTGAAGTTGATGAATTATTATTCAGGCCGAATGCTGAATCAAATGGATCTGCCTACACTGTAAATAGATTACCTCTACTACCTGAATAAGAAAGTAAATTGTTGGTTTTAACACCAATTGCCTCTATCAGAGTGCATCATCTTTTGCATCATTCATAAGCTATTTAACACACTCTGAAGCCATTGAGCATATATACAAATGGTAAA</gDNA_template>
            <first_frame> R  R  T  L  A  L  F  S  L  L  L  I  S  M  N  L  R :   R  L  E  *  P  W  S  E  W  *  F  R  K  G  N  L  L  S  Y  S  L  G  H  Q  I  L  Y  C  F  R  R  I  L  L  E  S  T  S  *  N  Q  S  E  L  E  Q  E  W  I  Y  G  F  G  F  S  L  S  P  V  H  P  M  K  T  V  T  I  V  K  E  L  M  M  R  V  K  L  M  N  Y  Y  S  G  R  M  L  N  Q  M  D  L  P  T  L  *  I  D  Y  L  Y  Y  L  N  K  K  V  N  C  W  F  *  H  Q  L  P  L  S  E  C  I  I  F  C  I  I  H  K  L  F  N  T  L  *  S  H  *  A  Y  I  Q  M  V   </first_frame>
            <second_frame>  V  E  L  W  P  C  S  V  F  C  S  L  V  *  T  *   : G  G  S  N  S  H  G  A  S  G  N  S  E  R  G  T  C  *  A  T  P  *  A  I  K  Y  Y  T  A  S  E  G  S  C  *  K  V  Q  A  K  I  R  A  N  W  N  R  N  G  F  T  A  S  D  S  P  F  H  Q  C  I  R  *  R  R  S  R  *  *  R  S  *  *  *  E  *  S  *  *  I  I  I  Q  A  E  C  *  I  K  W  I  C  L  H  C  K  *  I  T  S  T  T  *  I  R  K  *  I  V  G  F  N  T  N  C  L  Y  Q  S  A  S  S  F  A  S  F  I  S  Y  L  T  H  S  E  A  I  E  H  I  Y  K  W  *  </second_frame>
            <third_frame>   *  N  F  G  L  V  Q  S  S  A  H  *  Y  E  L  E  :  E  A  R  I  A  M  E  R  V  V  I  P  K  G  E  P  V  E  L  L  P  R  P  S  N  I  I  L  L  Q  K  D  L  V  R  K  Y  K  L  K  S  E  R  I  G  T  G  M  D  L  R  L  R  I  L  P  F  T  S  A  S  D  E  D  G  H  D  S  E  G  V  D  D  E  S  E  V  D  E  L  L  F  R  P  N  A  E  S  N  G  S  A  Y  T  V  N  R  L  P  L  L  P  E  *  E  S  K  L  L  V  L  T  P  I  A  S  I  R  V  H  H  L  L  H  H  S  *  A  I  *  H  T  L  K  P  L  S  I  Y  T  N  G  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44862" stop="44851"/>
                    <exon start="42424" stop="42113"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YELEEARIAMERVVIPKGEPVELLPRPSNIILLQKDLVRKYKLKSERIGTGMDLRLRILPFTSASDEDGHDSEGVDDESEVDELLFRPNAESNGSAYTVNRLPLLPE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="66857" PGL_stop="67600"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66857" e_stop="66911"/>
            <exon e_start="67037" e_stop="67600"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.559" acc_prob="0.996" e_score="0.764"/>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.764">
            <gDNA_exon_boundary e_start="66857" e_stop="66911" e_length="55"/>
          </exon>
          <intron i_serial="1" don_prob="0.559" acc_prob="0.996">
            <gDNA_intron_boundary i_start="66912" i_stop="67036" i_length="125"/>
          </intron>
          <exon e_serial="2" e_score="0.927">
            <gDNA_exon_boundary e_start="67037" e_stop="67600" e_length="564"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66857" stop="66911"/>
              <exon start="67037" stop="67600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273357" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGCCTTTCTGTTTTTCTAATTTTTTAAAGTTTTTAAAAGTCTTTTCTTCGTAAG : ATATGCATCCGTCAAATGTATACGTACATCCTGATTTAGTAGAGCATGATGTACTAAAAACTCAAGTTCATCATTGTTCCGAAGGAATTTGGAATGGTAGCATAAAAGAAGAGAGGTCTTGCTTATATACGCATCGTGGTGATATTGAATTTTGGCAACATATAAAATATCATCCATTACATTCTCGCATCCGTCAATATTTTGCAAATTGTAGATTTAAAGGATTTCTTGATGTAGGATGTGTGTCGTATGACTCCGGATTAATTTCTACTTTAATTGAAAGGTGGCGTCCAGAAACACATACTTTTCATGCGAACTGGCGAGGCTACCATAACTTTACAAGATGTTGAAATTTTATTCGGAATGGTAGTAGATGGTAGTCCTATAATTTTAAATGGGGCTGATTCTTTAGAGATTATAGGTAGACAAGAAATGATATTTGAATTAACAGGATGGTTACCCGATACTAGTTGTTTTACTGGTGTTAGTAGATTGTTAACATATAAATTGATTGATTATATTGAAGGTTTGGACGGTATTAATGATCACTCAACTGAGCATGAA</gDNA_template>
            <first_frame> K  P  F  C  F  S  N  F  L  K  F  L  K  V  F  S  S  *   : D  M  H  P  S  N  V  Y  V  H  P  D  L  V  E  H  D  V  L  K  T  Q  V  H  H  C  S  E  G  I  W  N  G  S  I  K  E  E  R  S  C  L  Y  T  H  R  G  D  I  E  F  W  Q  H  I  K  Y  H  P  L  H  S  R  I  R  Q  Y  F  A  N  C  R  F  K  G  F  L  D  V  G  C  V  S  Y  D  S  G  L  I  S  T  L  I  E  R  W  R  P  E  T  H  T  F  H  A  N  W  R  G  Y  H  N  F  T  R  C  *  N  F  I  R  N  G  S  R  W  *  S  Y  N  F  K  W  G  *  F  F  R  D  Y  R  *  T  R  N  D  I  *  I  N  R  M  V  T  R  Y  *  L  F  Y  W  C  *  *  I  V  N  I  *  I  D  *  L  Y  *  R  F  G  R  Y  *  *  S  L  N  *  A  *  </first_frame>
            <second_frame>  S  L  S  V  F  L  I  F  *  S  F  *  K  S  F  L  R  K  :  I  C  I  R  Q  M  Y  T  Y  I  L  I  *  *  S  M  M  Y  *  K  L  K  F  I  I  V  P  K  E  F  G  M  V  A  *  K  K  R  G  L  A  Y  I  R  I  V  V  I  L  N  F  G  N  I  *  N  I  I  H  Y  I  L  A  S  V  N  I  L  Q  I  V  D  L  K  D  F  L  M  *  D  V  C  R  M  T  P  D  *  F  L  L  *  L  K  G  G  V  Q  K  H  I  L  F  M  R  T  G  E  A  T  I  T  L  Q  D  V  E  I  L  F  G  M  V  V  D  G  S  P  I  I  L  N  G  A  D  S  L  E  I  I  G  R  Q  E  M  I  F  E  L  T  G  W  L  P  D  T  S  C  F  T  G  V  S  R  L  L  T  Y  K  L  I  D  Y  I  E  G  L  D  G  I  N  D  H  S  T  E  H  E </second_frame>
            <third_frame>   A  F  L  F  F  *  F  F  K  V  F  K  S  L  F  F  V  R :   Y  A  S  V  K  C  I  R  T  S  *  F  S  R  A  *  C  T  K  N  S  S  S  S  L  F  R  R  N  L  E  W  *  H  K  R  R  E  V  L  L  I  Y  A  S  W  *  Y  *  I  L  A  T  Y  K  I  S  S  I  T  F  S  H  P  S  I  F  C  K  L  *  I  *  R  I  S  *  C  R  M  C  V  V  *  L  R  I  N  F  Y  F  N  *  K  V  A  S  R  N  T  Y  F  S  C  E  L  A  R  L  P  *  L  Y  K  M  L  K  F  Y  S  E  W  *  *  M  V  V  L  *  F  *  M  G  L  I  L  *  R  L  *  V  D  K  K  *  Y  L  N  *  Q  D  G  Y  P  I  L  V  V  L  L  V  L  V  D  C  *  H  I  N  *  L  I  I  L  K  V  W  T  V  L  M  I  T  Q  L  S  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66911" stop="67386"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>348</number_coding_nucleotides>
                  <number_encoded_amino_acids>116</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DMHPSNVYVHPDLVEHDVLKTQVHHCSEGIWNGSIKEERSCLYTHRGDIEFWQHIKYHPLHSRIRQYFANCRFKGFLDVGCVSYDSGLISTLIERWRPETHTFHANWRGYHNFTRC*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67313" stop="67600"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LKGGVQKHILFMRTGEATITLQDVEILFGMVVDGSPIILNGADSLEIIGRQEMIFELTGWLPDTSCFTGVSRLLTYKLIDYIEGLDGINDHSTEHE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="72854" PGL_stop="73586"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72854" e_stop="73586"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="72854" e_stop="73586" e_length="733"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72854" stop="73586"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375693" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72854" stop="73499"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392599" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTATTAACAAAACAAGCAAAAAACAATAGAATTGAAATGAGATAAAACTATAATTTACAAATATCTTAGTACATCAAAGTTCCATGTAAGCTTAAGTGGGTTACACGACTCTTAGCTACTACTATCATTCGATATACAATTATGGAGAACATGATGTCCAATGATCAGAGCAATCAATTTTCGATTGATCCGTCTTTCTTCCAGTTTCTGATGCATAATAGTCTTGCAGTTGAGCTACTTACTGCGTCAAATCAATGCCGCGATAGGAGAAACTCGCGCACTGAAAAACTACACATCATAGAAACAAACGGCTCCAAAACAAGAAGAGGATTTCAAGGAAAAGCTTTCAAGAACGTGTAGCATTGTTTCGTTGAACAAAACTAATACCTACTGACATATAGTAGATTAAAAAAAAATCACCAACAGGTCTGACCACTTTCGACTTGCAAAATGTGGGTGTGGTAGGAACAAAACCAGAAAAATGATCAATACCCAGTGCAGTCGACAGAAAGAATATCCACTGCCGAGTACTGAAAACGTCGAGATTACTCACCCAATACAAGATTTTCCTTCACATACACGAGTCAATGACCCTTTGAATGAGAAGACTACAGTGATGAATATAATTAGCAAATGATGCACTGTATCTACGGACATCCTAAACCACACACCACAGCAATTAAAATCCCATACAACTCTTGATGATATAAACCAAAACATTGACAAGGCTAGG</gDNA_template>
            <first_frame> L  L  T  K  Q  A  K  N  N  R  I  E  M  R  *  N  Y  N  L  Q  I  S  *  Y  I  K  V  P  C  K  L  K  W  V  T  R  L  L  A  T  T  I  I  R  Y  T  I  M  E  N  M  M  S  N  D  Q  S  N  Q  F  S  I  D  P  S  F  F  Q  F  L  M  H  N  S  L  A  V  E  L  L  T  A  S  N  Q  C  R  D  R  R  N  S  R  T  E  K  L  H  I  I  E  T  N  G  S  K  T  R  R  G  F  Q  G  K  A  F  K  N  V  *  H  C  F  V  E  Q  N  *  Y  L  L  T  Y  S  R  L  K  K  N  H  Q  Q  V  *  P  L  S  T  C  K  M  W  V  W  *  E  Q  N  Q  K  N  D  Q  Y  P  V  Q  S  T  E  R  I  S  T  A  E  Y  *  K  R  R  D  Y  S  P  N  T  R  F  S  F  T  Y  T  S  Q  *  P  F  E  *  E  D  Y  S  D  E  Y  N  *  Q  M  M  H  C  I  Y  G  H  P  K  P  H  T  T  A  I  K  I  P  Y  N  S  *  *  Y  K  P  K  H  *  Q  G  *  </first_frame>
            <second_frame>  Y  *  Q  N  K  Q  K  T  I  E  L  K  *  D  K  T  I  I  Y  K  Y  L  S  T  S  K  F  H  V  S  L  S  G  L  H  D  S  *  L  L  L  S  F  D  I  Q  L  W  R  T  *  C  P  M  I  R  A  I  N  F  R  L  I  R  L  S  S  S  F  *  C  I  I  V  L  Q  L  S  Y  L  L  R  Q  I  N  A  A  I  G  E  T  R  A  L  K  N  Y  T  S  *  K  Q  T  A  P  K  Q  E  E  D  F  K  E  K  L  S  R  T  C  S  I  V  S  L  N  K  T  N  T  Y  *  H  I  V  D  *  K  K  I  T  N  R  S  D  H  F  R  L  A  K  C  G  C  G  R  N  K  T  R  K  M  I  N  T  Q  C  S  R  Q  K  E  Y  P  L  P  S  T  E  N  V  E  I  T  H  P  I  Q  D  F  P  S  H  T  R  V  N  D  P  L  N  E  K  T  T  V  M  N  I  I  S  K  *  C  T  V  S  T  D  I  L  N  H  T  P  Q  Q  L  K  S  H  T  T  L  D  D  I  N  Q  N  I  D  K  A  R </second_frame>
            <third_frame>   I  N  K  T  S  K  K  Q  *  N  *  N  E  I  K  L  *  F  T  N  I  L  V  H  Q  S  S  M  *  A  *  V  G  Y  T  T  L  S  Y  Y  Y  H  S  I  Y  N  Y  G  E  H  D  V  Q  *  S  E  Q  S  I  F  D  *  S  V  F  L  P  V  S  D  A  *  *  S  C  S  *  A  T  Y  C  V  K  S  M  P  R  *  E  K  L  A  H  *  K  T  T  H  H  R  N  K  R  L  Q  N  K  K  R  I  S  R  K  S  F  Q  E  R  V  A  L  F  R  *  T  K  L  I  P  T  D  I  *  *  I  K  K  K  S  P  T  G  L  T  T  F  D  L  Q  N  V  G  V  V  G  T  K  P  E  K  *  S  I  P  S  A  V  D  R  K  N  I  H  C  R  V  L  K  T  S  R  L  L  T  Q  Y  K  I  F  L  H  I  H  E  S  M  T  L  *  M  R  R  L  Q  *  *  I  *  L  A  N  D  A  L  Y  L  R  T  S  *  T  T  H  H  S  N  *  N  P  I  Q  L  L  M  I  *  T  K  T  L  T  R  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72923" stop="73213"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YIKVPCKLKWVTRLLATTIIRYTIMENMMSNDQSNQFSIDPSFFQFLMHNSLAVELLTASNQCRDRRNSRTEKLHIIETNGSKTRRGFQGKAFKNV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73263" stop="73490"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKITNRSDHFRLAKCGCGRNKTRKMINTQCSRQKEYPLPSTENVEITHPIQDFPSHTRVNDPLNEKTTVMNIISK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="74168" PGL_stop="73247"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74168" e_stop="73247"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="74168" e_stop="73247" e_length="922"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74168" stop="73322"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700667" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73920" stop="73509"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392340" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73919" stop="73247"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253742" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73919" stop="73248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73909" stop="73469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256812" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTGTAGGTGTGAGAAATGGTGATATTTGATTAAAAATCTGCATATTGGGATATTGAGTGTTTCTAAATAATTTTGAATTTCAATTTTTATATGAATGGACCCAACTTGTTTGCGAGTAAGTTATTGTCCACGCTGGATTGGTATAAATTTGCACTGAGACGTGCCACTACTAAAGATTTTACATTGTCATGAGTTTGTCTCAAGTTGCCATTATAACTTGTTTTAGATCGTCTTTCATAATTCTCCCTTTTTTAGGTGAAAATTATTATTGTCAGATGCATCTATTGTGTGCAGTTATAACTATAGGTGTTCCCTAACATTGAAAATGTGGATGCTATGCTACAACTGATTGTTTGTCGAGTACCTAAATTTCATAAGTTTGTTTGCGGTTTCTGGGTAAGTTGTGCGTACGCTCTACCCTTCCCAGACTTCACTTGGTATGTTGTTTTTAGCGATTTCGGTTTATATAAGGTGAAATAATCAGACCTTATCTCAAAGTCCATCCAGCTTTTGTTGCAAACTTTTTATGTGTGTTTCCCGAAATTGAGCCAGTTATGAGCTTGGCTGTCTCTGGCTTTCACCTAGCCTTGTCAATGTTTTGGTTTATATCATCAAGAGTTGTATGGGATTTTAATTGCTGTGGTGTGTGGTTTAGGATGTCCGTAGATACAGTGCATCATTTGCTAATTATATTCATCACTGTAGTCTTCTCATTCAAAGGGTCATTGACTCGTGTATGTGAAGGAAAATCTTGTATTGGGTGAGTAATCTCGACGTTTTCAGTACTCGGCAGTGGATATTCTTTCTGTCGACTGCACTGGGTATTGATCATTTTTCTGGTTTTGTTCCTACCACACCCACATTTTGCAAGTCGAAAGTGGTCAGACCTGTTGGTGATTTTTTTTTAATCTACTATATGT</gDNA_template>
            <first_frame> I  C  R  C  E  K  W  *  Y  L  I  K  N  L  H  I  G  I  L  S  V  S  K  *  F  *  I  S  I  F  I  *  M  D  P  T  C  L  R  V  S  Y  C  P  R  W  I  G  I  N  L  H  *  D  V  P  L  L  K  I  L  H  C  H  E  F  V  S  S  C  H  Y  N  L  F  *  I  V  F  H  N  S  P  F  F  R  *  K  L  L  L  S  D  A  S  I  V  C  S  Y  N  Y  R  C  S  L  T  L  K  M  W  M  L  C  Y  N  *  L  F  V  E  Y  L  N  F  I  S  L  F  A  V  S  G  *  V  V  R  T  L  Y  P  S  Q  T  S  L  G  M  L  F  L  A  I  S  V  Y  I  R  *  N  N  Q  T  L  S  Q  S  P  S  S  F  C  C  K  L  F  M  C  V  S  R  N  *  A  S  Y  E  L  G  C  L  W  L  S  P  S  L  V  N  V  L  V  Y  I  I  K  S  C  M  G  F  *  L  L  W  C  V  V  *  D  V  R  R  Y  S  A  S  F  A  N  Y  I  H  H  C  S  L  L  I  Q  R  V  I  D  S  C  M  *  R  K  I  L  Y  W  V  S  N  L  D  V  F  S  T  R  Q  W  I  F  F  L  S  T  A  L  G  I  D  H  F  S  G  F  V  P  T  T  P  T  F  C  K  S  K  V  V  R  P  V  G  D  F  F  L  I  Y  Y  M  </first_frame>
            <second_frame>  F  V  G  V  R  N  G  D  I  *  L  K  I  C  I  L  G  Y  *  V  F  L  N  N  F  E  F  Q  F  L  Y  E  W  T  Q  L  V  C  E  *  V  I  V  H  A  G  L  V  *  I  C  T  E  T  C  H  Y  *  R  F  Y  I  V  M  S  L  S  Q  V  A  I  I  T  C  F  R  S  S  F  I  I  L  P  F  L  G  E  N  Y  Y  C  Q  M  H  L  L  C  A  V  I  T  I  G  V  P  *  H  *  K  C  G  C  Y  A  T  T  D  C  L  S  S  T  *  I  S  *  V  C  L  R  F  L  G  K  L  C  V  R  S  T  L  P  R  L  H  L  V  C  C  F  *  R  F  R  F  I  *  G  E  I  I  R  P  Y  L  K  V  H  P  A  F  V  A  N  F  L  C  V  F  P  E  I  E  P  V  M  S  L  A  V  S  G  F  H  L  A  L  S  M  F  W  F  I  S  S  R  V  V  W  D  F  N  C  C  G  V  W  F  R  M  S  V  D  T  V  H  H  L  L  I  I  F  I  T  V  V  F  S  F  K  G  S  L  T  R  V  C  E  G  K  S  C  I  G  *  V  I  S  T  F  S  V  L  G  S  G  Y  S  F  C  R  L  H  W  V  L  I  I  F  L  V  L  F  L  P  H  P  H  F  A  S  R  K  W  S  D  L  L  V  I  F  F  *  S  T  I  C </second_frame>
            <third_frame>   L  *  V  *  E  M  V  I  F  D  *  K  S  A  Y  W  D  I  E  C  F  *  I  I  L  N  F  N  F  Y  M  N  G  P  N  L  F  A  S  K  L  L  S  T  L  D  W  Y  K  F  A  L  R  R  A  T  T  K  D  F  T  L  S  *  V  C  L  K  L  P  L  *  L  V  L  D  R  L  S  *  F  S  L  F  *  V  K  I  I  I  V  R  C  I  Y  C  V  Q  L  *  L  *  V  F  P  N  I  E  N  V  D  A  M  L  Q  L  I  V  C  R  V  P  K  F  H  K  F  V  C  G  F  W  V  S  C  A  Y  A  L  P  F  P  D  F  T  W  Y  V  V  F  S  D  F  G  L  Y  K  V  K  *  S  D  L  I  S  K  S  I  Q  L  L  L  Q  T  F  Y  V  C  F  P  K  L  S  Q  L  *  A  W  L  S  L  A  F  T  *  P  C  Q  C  F  G  L  Y  H  Q  E  L  Y  G  I  L  I  A  V  V  C  G  L  G  C  P  *  I  Q  C  I  I  C  *  L  Y  S  S  L  *  S  S  H  S  K  G  H  *  L  V  Y  V  K  E  N  L  V  L  G  E  *  S  R  R  F  Q  Y  S  A  V  D  I  L  S  V  D  C  T  G  Y  *  S  F  F  W  F  C  S  Y  H  T  H  I  L  Q  V  E  S  G  Q  T  C  W  *  F  F  F  N  L  L  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73696" stop="73403"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>291</number_coding_nucleotides>
                  <number_encoded_amino_acids>97</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GEIIRPYLKVHPAFVANFLCVFPEIEPVMSLAVSGFHLALSMFWFISSRVVWDFNCCGVWFRMSVDTVHHLLIIFITVVFSFKGSLTRVCEGKSCIG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="78853" PGL_stop="76041"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="78853" e_stop="78304"/>
            <exon e_start="77223" e_stop="76874"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78853" e_stop="78304" e_length="550"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="78303" i_stop="77224" i_length="1080"/>
          </intron>
          <exon e_serial="2" e_score="0.980">
            <gDNA_exon_boundary e_start="77223" e_stop="76874" e_length="350"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78853" stop="78304"/>
              <exon start="77223" stop="77041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541592" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78852" stop="78507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78778" stop="78304"/>
              <exon start="77223" stop="76874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541589" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCAAACAGATGGACATGGTGATCCGATGGGTCCTGGGCAATATGGTGCGCCTAGTGGTTATGGTGGATTTTCAGGTCATTCTTCATATGGCGGGCATGGACATGGTCCCAATTCGGCATTGGGTAGTGGAAATGGTATCGGTGTGGGTGGTCCTGGTGGTTCATCTTATGGGAACCAATCTGTGGGTGGTGGGTACGGTTCAGGGATTGGTGGTCCATATGGTGGGGGGTCTCATTATGGTGGAGCTGGTTCAGCTGGATATGGCGGGTTGACCGGTAGTGGTTATGGCGGTGCTGGGGCAGTGGGAGGTGCTGCTGGTGGATTACCTGGCGCTGGTAGTACATTAGGTGGTGCTGGCCGTGGATCTTCAATGTATGGGTTACCCCCAAGCTCAGCCGGGATGCCCTCGGGAGATTATCCACCACAGGGTTCTCATTACGGTCCTTTACATCAACCTCACGGGCTACAAAACCAAGGCCCTGGGGCATCAGCTGCACCTAGAGTTGCACCTGGGGGTATGTACCAGGGGATGCATTCATATTACTGAG : GTGTTTTGACAGCTTGGTGCAGCTGCTTTTAGTGGTTCTGGATGAATGCAGATGTTTTTAAGTCTGGTTTGATGATTTTGATTGCTATCTACTTTGGCTTCTGCATTTGCACCCTTTACTGATGTCCTTCTACATTGTGGTAGTCAAGCGGTTACTTTCTTCAAGAGACCTTGTGCTTTTTGGAGTTCTAGTTGGAGTTTGTGTTTGGATATAAATATAGTAATGTTTCGTACGCTTTTGAGCCTTAGAAACGATCTGCTGTATTGGAACAACTTTTAGATTGCTGTTGAAGTTGCTGAAATTAGTTTCTTATGGTATTTGGAAGACCTCCGTTTCTTTACATTTAAATT</gDNA_template>
            <first_frame> V  Q  T  D  G  H  G  D  P  M  G  P  G  Q  Y  G  A  P  S  G  Y  G  G  F  S  G  H  S  S  Y  G  G  H  G  H  G  P  N  S  A  L  G  S  G  N  G  I  G  V  G  G  P  G  G  S  S  Y  G  N  Q  S  V  G  G  G  Y  G  S  G  I  G  G  P  Y  G  G  G  S  H  Y  G  G  A  G  S  A  G  Y  G  G  L  T  G  S  G  Y  G  G  A  G  A  V  G  G  A  A  G  G  L  P  G  A  G  S  T  L  G  G  A  G  R  G  S  S  M  Y  G  L  P  P  S  S  A  G  M  P  S  G  D  Y  P  P  Q  G  S  H  Y  G  P  L  H  Q  P  H  G  L  Q  N  Q  G  P  G  A  S  A  A  P  R  V  A  P  G  G  M  Y  Q  G  M  H  S  Y  Y  *   : G  V  L  T  A  W  C  S  C  F  *  W  F  W  M  N  A  D  V  F  K  S  G  L  M  I  L  I  A  I  Y  F  G  F  C  I  C  T  L  Y  *  C  P  S  T  L  W  *  S  S  G  Y  F  L  Q  E  T  L  C  F  L  E  F  *  L  E  F  V  F  G  Y  K  Y  S  N  V  S  Y  A  F  E  P  *  K  R  S  A  V  L  E  Q  L  L  D  C  C  *  S  C  *  N  *  F  L  M  V  F  G  R  P  P  F  L  Y  I  *  I </first_frame>
            <second_frame>  F  K  Q  M  D  M  V  I  R  W  V  L  G  N  M  V  R  L  V  V  M  V  D  F  Q  V  I  L  H  M  A  G  M  D  M  V  P  I  R  H  W  V  V  E  M  V  S  V  W  V  V  L  V  V  H  L  M  G  T  N  L  W  V  V  G  T  V  Q  G  L  V  V  H  M  V  G  G  L  I  M  V  E  L  V  Q  L  D  M  A  G  *  P  V  V  V  M  A  V  L  G  Q  W  E  V  L  L  V  D  Y  L  A  L  V  V  H  *  V  V  L  A  V  D  L  Q  C  M  G  Y  P  Q  A  Q  P  G  C  P  R  E  I  I  H  H  R  V  L  I  T  V  L  Y  I  N  L  T  G  Y  K  T  K  A  L  G  H  Q  L  H  L  E  L  H  L  G  V  C  T  R  G  C  I  H  I  T  E  :  V  F  *  Q  L  G  A  A  A  F  S  G  S  G  *  M  Q  M  F  L  S  L  V  *  *  F  *  L  L  S  T  L  A  S  A  F  A  P  F  T  D  V  L  L  H  C  G  S  Q  A  V  T  F  F  K  R  P  C  A  F  W  S  S  S  W  S  L  C  L  D  I  N  I  V  M  F  R  T  L  L  S  L  R  N  D  L  L  Y  W  N  N  F  *  I  A  V  E  V  A  E  I  S  F  L  W  Y  L  E  D  L  R  F  F  T  F  K   </second_frame>
            <third_frame>   S  N  R  W  T  W  *  S  D  G  S  W  A  I  W  C  A  *  W  L  W  W  I  F  R  S  F  F  I  W  R  A  W  T  W  S  Q  F  G  I  G  *  W  K  W  Y  R  C  G  W  S  W  W  F  I  L  W  E  P  I  C  G  W  W  V  R  F  R  D  W  W  S  I  W  W  G  V  S  L  W  W  S  W  F  S  W  I  W  R  V  D  R  *  W  L  W  R  C  W  G  S  G  R  C  C  W  W  I  T  W  R  W  *  Y  I  R  W  C  W  P  W  I  F  N  V  W  V  T  P  K  L  S  R  D  A  L  G  R  L  S  T  T  G  F  S  L  R  S  F  T  S  T  S  R  A  T  K  P  R  P  W  G  I  S  C  T  *  S  C  T  W  G  Y  V  P  G  D  A  F  I  L  L  R :   C  F  D  S  L  V  Q  L  L  L  V  V  L  D  E  C  R  C  F  *  V  W  F  D  D  F  D  C  Y  L  L  W  L  L  H  L  H  P  L  L  M  S  F  Y  I  V  V  V  K  R  L  L  S  S  R  D  L  V  L  F  G  V  L  V  G  V  C  V  W  I  *  I  *  *  C  F  V  R  F  *  A  L  E  T  I  C  C  I  G  T  T  F  R  L  L  L  K  L  L  K  L  V  S  Y  G  I  W  K  T  S  V  S  L  H  L  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78853" stop="78305"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VQTDGHGDPMGPGQYGAPSGYGGFSGHSSYGGHGHGPNSALGSGNGIGVGGPGGSSYGNQSVGGGYGSGIGGPYGGGSHYGGAGSAGYGGLTGSGYGGAGAVGGAAGGLPGAGSTLGGAGRGSSMYGLPPSSAGMPSGDYPPQGSHYGPLHQPHGLQNQGPGASAAPRVAPGGMYQGMHSYY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77142" stop="76945"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSTLASAFAPFTDVLLHCGSQAVTFFKRPCAFWSSSWSLCLDINIVMFRTLLSLRNDLLYWNNF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="78853" e_stop="78304"/>
            <exon e_start="77223" e_stop="76877"/>
            <exon e_start="76055" e_stop="76041"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.762" e_score="0.988"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="78853" e_stop="78304" e_length="550"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.997">
            <gDNA_intron_boundary i_start="78303" i_stop="77224" i_length="1080"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="77223" e_stop="76877" e_length="347"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.762">
            <gDNA_intron_boundary i_start="76876" i_stop="76056" i_length="821"/>
          </intron>
          <exon e_serial="3" e_score="0.667">
            <gDNA_exon_boundary e_start="76055" e_stop="76041" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78853" stop="78304"/>
              <exon start="77223" stop="77041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541592" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78852" stop="78507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78342" stop="78304"/>
              <exon start="77223" stop="76877"/>
              <exon start="76055" stop="76041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E221431" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTCAAACAGATGGACATGGTGATCCGATGGGTCCTGGGCAATATGGTGCGCCTAGTGGTTATGGTGGATTTTCAGGTCATTCTTCATATGGCGGGCATGGACATGGTCCCAATTCGGCATTGGGTAGTGGAAATGGTATCGGTGTGGGTGGTCCTGGTGGTTCATCTTATGGGAACCAATCTGTGGGTGGTGGGTACGGTTCAGGGATTGGTGGTCCATATGGTGGGGGGTCTCATTATGGTGGAGCTGGTTCAGCTGGATATGGCGGGTTGACCGGTAGTGGTTATGGCGGTGCTGGGGCAGTGGGAGGTGCTGCTGGTGGATTACCTGGCGCTGGTAGTACATTAGGTGGTGCTGGCCGTGGATCTTCAATGTATGGGTTACCCCCAAGCTCAGCCGGGATGCCCTCGGGAGATTATCCACCACAGGGTTCTCATTACGGTCCTTTACATCAACCTCACGGGCTACAAAACCAAGGCCCTGGGGCATCAGCTGCACCTAGAGTTGCACCTGGGGGTATGTACCAGGGGATGCATTCATATTACTGAG : GTGTTTTGACAGCTTGGTGCAGCTGCTTTTAGTGGTTCTGGATGAATGCAGATGTTTTTAAGTCTGGTTTGATGATTTTGATTGCTATCTACTTTGGCTTCTGCATTTGCACCCTTTACTGATGTCCTTCTACATTGTGGTAGTCAAGCGGTTACTTTCTTCAAGAGACCTTGTGCTTTTTGGAGTTCTAGTTGGAGTTTGTGTTTGGATATAAATATAGTAATGTTTCGTACGCTTTTGAGCCTTAGAAACGATCTGCTGTATTGGAACAACTTTTAGATTGCTGTTGAAGTTGCTGAAATTAGTTTCTTATGGTATTTGGAAGACCTCCGTTTCTTTACATTTAA : TACAACAACAACAAA</gDNA_template>
            <first_frame> V  Q  T  D  G  H  G  D  P  M  G  P  G  Q  Y  G  A  P  S  G  Y  G  G  F  S  G  H  S  S  Y  G  G  H  G  H  G  P  N  S  A  L  G  S  G  N  G  I  G  V  G  G  P  G  G  S  S  Y  G  N  Q  S  V  G  G  G  Y  G  S  G  I  G  G  P  Y  G  G  G  S  H  Y  G  G  A  G  S  A  G  Y  G  G  L  T  G  S  G  Y  G  G  A  G  A  V  G  G  A  A  G  G  L  P  G  A  G  S  T  L  G  G  A  G  R  G  S  S  M  Y  G  L  P  P  S  S  A  G  M  P  S  G  D  Y  P  P  Q  G  S  H  Y  G  P  L  H  Q  P  H  G  L  Q  N  Q  G  P  G  A  S  A  A  P  R  V  A  P  G  G  M  Y  Q  G  M  H  S  Y  Y  *   : G  V  L  T  A  W  C  S  C  F  *  W  F  W  M  N  A  D  V  F  K  S  G  L  M  I  L  I  A  I  Y  F  G  F  C  I  C  T  L  Y  *  C  P  S  T  L  W  *  S  S  G  Y  F  L  Q  E  T  L  C  F  L  E  F  *  L  E  F  V  F  G  Y  K  Y  S  N  V  S  Y  A  F  E  P  *  K  R  S  A  V  L  E  Q  L  L  D  C  C  *  S  C  *  N  *  F  L  M  V  F  G  R  P  P  F  L  Y  I  *  :  Y  N  N  N  K </first_frame>
            <second_frame>  F  K  Q  M  D  M  V  I  R  W  V  L  G  N  M  V  R  L  V  V  M  V  D  F  Q  V  I  L  H  M  A  G  M  D  M  V  P  I  R  H  W  V  V  E  M  V  S  V  W  V  V  L  V  V  H  L  M  G  T  N  L  W  V  V  G  T  V  Q  G  L  V  V  H  M  V  G  G  L  I  M  V  E  L  V  Q  L  D  M  A  G  *  P  V  V  V  M  A  V  L  G  Q  W  E  V  L  L  V  D  Y  L  A  L  V  V  H  *  V  V  L  A  V  D  L  Q  C  M  G  Y  P  Q  A  Q  P  G  C  P  R  E  I  I  H  H  R  V  L  I  T  V  L  Y  I  N  L  T  G  Y  K  T  K  A  L  G  H  Q  L  H  L  E  L  H  L  G  V  C  T  R  G  C  I  H  I  T  E  :  V  F  *  Q  L  G  A  A  A  F  S  G  S  G  *  M  Q  M  F  L  S  L  V  *  *  F  *  L  L  S  T  L  A  S  A  F  A  P  F  T  D  V  L  L  H  C  G  S  Q  A  V  T  F  F  K  R  P  C  A  F  W  S  S  S  W  S  L  C  L  D  I  N  I  V  M  F  R  T  L  L  S  L  R  N  D  L  L  Y  W  N  N  F  *  I  A  V  E  V  A  E  I  S  F  L  W  Y  L  E  D  L  R  F  F  T  F  N :   T  T  T  T   </second_frame>
            <third_frame>   S  N  R  W  T  W  *  S  D  G  S  W  A  I  W  C  A  *  W  L  W  W  I  F  R  S  F  F  I  W  R  A  W  T  W  S  Q  F  G  I  G  *  W  K  W  Y  R  C  G  W  S  W  W  F  I  L  W  E  P  I  C  G  W  W  V  R  F  R  D  W  W  S  I  W  W  G  V  S  L  W  W  S  W  F  S  W  I  W  R  V  D  R  *  W  L  W  R  C  W  G  S  G  R  C  C  W  W  I  T  W  R  W  *  Y  I  R  W  C  W  P  W  I  F  N  V  W  V  T  P  K  L  S  R  D  A  L  G  R  L  S  T  T  G  F  S  L  R  S  F  T  S  T  S  R  A  T  K  P  R  P  W  G  I  S  C  T  *  S  C  T  W  G  Y  V  P  G  D  A  F  I  L  L  R :   C  F  D  S  L  V  Q  L  L  L  V  V  L  D  E  C  R  C  F  *  V  W  F  D  D  F  D  C  Y  L  L  W  L  L  H  L  H  P  L  L  M  S  F  Y  I  V  V  V  K  R  L  L  S  S  R  D  L  V  L  F  G  V  L  V  G  V  C  V  W  I  *  I  *  *  C  F  V  R  F  *  A  L  E  T  I  C  C  I  G  T  T  F  R  L  L  L  K  L  L  K  L  V  S  Y  G  I  W  K  T  S  V  S  L  H  L   : I  Q  Q  Q  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="78853" stop="78305"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VQTDGHGDPMGPGQYGAPSGYGGFSGHSSYGGHGHGPNSALGSGNGIGVGGPGGSSYGNQSVGGGYGSGIGGPYGGGSHYGGAGSAGYGGLTGSGYGGAGAVGGAAGGLPGAGSTLGGAGRGSSMYGLPPSSAGMPSGDYPPQGSHYGPLHQPHGLQNQGPGASAAPRVAPGGMYQGMHSYY*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77142" stop="76945"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLSTLASAFAPFTDVLLHCGSQAVTFFKRPCAFWSSSWSLCLDINIVMFRTLLSLRNDLLYWNNF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="76862" PGL_stop="77171"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76862" e_stop="77171"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.932"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.932">
            <gDNA_exon_boundary e_start="76862" e_stop="77171" e_length="310"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76862" stop="77171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E222007" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTAGATTCAGACAATTTAAATGTAAAGAAACGGAGGTCTTCCAAATACCATAAGAAACTAATTTCAGCAACTTCAACAGCAATCTAAAAGTTGTTCCAATACAGCAGATCGTTTCTAAGGCTCAAAAGCGTACGAAACATTACTATATTTATATCCAAACACAAACTCCAACTAGAACTCCAAAAAGCACAAGGTCTCTTGAAGAAAGTAACCGCTTGACTACCACAATGTAGAAGGACATCAGTAAAGGGTGCAAATGCAGAAGCCAAAGTAGATAGCAATCAAAATCATCAAACCAGACTTAAAAACA</gDNA_template>
            <first_frame> L  D  S  D  N  L  N  V  K  K  R  R  S  S  K  Y  H  K  K  L  I  S  A  T  S  T  A  I  *  K  L  F  Q  Y  S  R  S  F  L  R  L  K  S  V  R  N  I  T  I  F  I  S  K  H  K  L  Q  L  E  L  Q  K  A  Q  G  L  L  K  K  V  T  A  *  L  P  Q  C  R  R  T  S  V  K  G  A  N  A  E  A  K  V  D  S  N  Q  N  H  Q  T  R  L  K  N  </first_frame>
            <second_frame>  *  I  Q  T  I  *  M  *  R  N  G  G  L  P  N  T  I  R  N  *  F  Q  Q  L  Q  Q  Q  S  K  S  C  S  N  T  A  D  R  F  *  G  S  K  A  Y  E  T  L  L  Y  L  Y  P  N  T  N  S  N  *  N  S  K  K  H  K  V  S  *  R  K  *  P  L  D  Y  H  N  V  E  G  H  Q  *  R  V  Q  M  Q  K  P  K  *  I  A  I  K  I  I  K  P  D  L  K  T </second_frame>
            <third_frame>   R  F  R  Q  F  K  C  K  E  T  E  V  F  Q  I  P  *  E  T  N  F  S  N  F  N  S  N  L  K  V  V  P  I  Q  Q  I  V  S  K  A  Q  K  R  T  K  H  Y  Y  I  Y  I  Q  T  Q  T  P  T  R  T  P  K  S  T  R  S  L  E  E  S  N  R  L  T  T  T  M  *  K  D  I  S  K  G  C  K  C  R  S  Q  S  R  *  Q  S  K  S  S  N  Q  T  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12SLe0004H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="79669" PGL_stop="78893"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79669" e_stop="78893"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="79669" e_stop="78893" e_length="777"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79669" stop="78893"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79659" stop="79084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573416" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTTAAACTCCATTGTTCGGTAGAGTTTTTGAGCTCCAGAAAATGGACCAGATGAAGAAGAGGAAGCTTGAGGACAACGGCGTCGGCACTGACGTTCCTGTTGCGAATAGGCTTTCGATCGAAGATGGTCGGAAGATTCTTGAATCTGTTACACCTGAACAAATGGTAGAAATCTTACAAAATGCTGTCGTTCGTCATCCCGACGTGCTTGATCAAGTTCGAGAAATCGTCGATCGTGACCCTACTAAAAGAAAGCTTTTTGTTCGTGGGCTTGGCTGGGAAACTACGACTGAAAAAATCAGGTCAATTTTTGGGACATTCGGTGAGTTAGAAGAAGCTGTTGTTATTCTTGATAAAAATACTGGGAAGAGCAAAGGTTATGGATTTGTTACGTTTAAGCATGTTGATGGAGCTTTACTTGCGTTAAAGCAACCGAGTAAACACGTTGATGGCCGAGTTACGGTTACTCAGCTTGCTTCAGCTGGGATTCAAGGTGGCCCTGGTGGTGGGAGTTCGAATAATCCAGTGGATGTGTCGTTGAGGAAGATTTATGTATCTAATGTGCCGTATGATATGCAATCCGAGAGGATTTTACAGCATTTTTTGATGTATGGGGAGATAGAGGAAGGACCGTTAGGGTTTGATAAGGCCACTGGGAAGTCAAAAGGGTATGCTTTGTTTGTGTACAAGACGGCGGAGGCAGCACAGTCTTCGTTGGTGGATCCTGTTAAGAATATTGATGGGCATCAATTGAACTGTAAGCTGGCTATTGATGGG</gDNA_template>
            <first_frame> F  *  T  P  L  F  G  R  V  F  E  L  Q  K  M  D  Q  M  K  K  R  K  L  E  D  N  G  V  G  T  D  V  P  V  A  N  R  L  S  I  E  D  G  R  K  I  L  E  S  V  T  P  E  Q  M  V  E  I  L  Q  N  A  V  V  R  H  P  D  V  L  D  Q  V  R  E  I  V  D  R  D  P  T  K  R  K  L  F  V  R  G  L  G  W  E  T  T  T  E  K  I  R  S  I  F  G  T  F  G  E  L  E  E  A  V  V  I  L  D  K  N  T  G  K  S  K  G  Y  G  F  V  T  F  K  H  V  D  G  A  L  L  A  L  K  Q  P  S  K  H  V  D  G  R  V  T  V  T  Q  L  A  S  A  G  I  Q  G  G  P  G  G  G  S  S  N  N  P  V  D  V  S  L  R  K  I  Y  V  S  N  V  P  Y  D  M  Q  S  E  R  I  L  Q  H  F  L  M  Y  G  E  I  E  E  G  P  L  G  F  D  K  A  T  G  K  S  K  G  Y  A  L  F  V  Y  K  T  A  E  A  A  Q  S  S  L  V  D  P  V  K  N  I  D  G  H  Q  L  N  C  K  L  A  I  D  G </first_frame>
            <second_frame>  F  K  L  H  C  S  V  E  F  L  S  S  R  K  W  T  R  *  R  R  G  S  L  R  T  T  A  S  A  L  T  F  L  L  R  I  G  F  R  S  K  M  V  G  R  F  L  N  L  L  H  L  N  K  W  *  K  S  Y  K  M  L  S  F  V  I  P  T  C  L  I  K  F  E  K  S  S  I  V  T  L  L  K  E  S  F  L  F  V  G  L  A  G  K  L  R  L  K  K  S  G  Q  F  L  G  H  S  V  S  *  K  K  L  L  L  F  L  I  K  I  L  G  R  A  K  V  M  D  L  L  R  L  S  M  L  M  E  L  Y  L  R  *  S  N  R  V  N  T  L  M  A  E  L  R  L  L  S  L  L  Q  L  G  F  K  V  A  L  V  V  G  V  R  I  I  Q  W  M  C  R  *  G  R  F  M  Y  L  M  C  R  M  I  C  N  P  R  G  F  Y  S  I  F  *  C  M  G  R  *  R  K  D  R  *  G  L  I  R  P  L  G  S  Q  K  G  M  L  C  L  C  T  R  R  R  R  Q  H  S  L  R  W  W  I  L  L  R  I  L  M  G  I  N  *  T  V  S  W  L  L  M   </second_frame>
            <third_frame>   L  N  S  I  V  R  *  S  F  *  A  P  E  N  G  P  D  E  E  E  E  A  *  G  Q  R  R  R  H  *  R  S  C  C  E  *  A  F  D  R  R  W  S  E  D  S  *  I  C  Y  T  *  T  N  G  R  N  L  T  K  C  C  R  S  S  S  R  R  A  *  S  S  S  R  N  R  R  S  *  P  Y  *  K  K  A  F  C  S  W  A  W  L  G  N  Y  D  *  K  N  Q  V  N  F  W  D  I  R  *  V  R  R  S  C  C  Y  S  *  *  K  Y  W  E  E  Q  R  L  W  I  C  Y  V  *  A  C  *  W  S  F  T  C  V  K  A  T  E  *  T  R  *  W  P  S  Y  G  Y  S  A  C  F  S  W  D  S  R  W  P  W  W  W  E  F  E  *  S  S  G  C  V  V  E  E  D  L  C  I  *  C  A  V  *  Y  A  I  R  E  D  F  T  A  F  F  D  V  W  G  D  R  G  R  T  V  R  V  *  *  G  H  W  E  V  K  R  V  C  F  V  C  V  Q  D  G  G  G  S  T  V  F  V  G  G  S  C  *  E  Y  *  W  A  S  I  E  L  *  A  G  Y  *  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79663" stop="78893"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TPLFGRVFELQKMDQMKKRKLEDNGVGTDVPVANRLSIEDGRKILESVTPEQMVEILQNAVVRHPDVLDQVREIVDRDPTKRKLFVRGLGWETTTEKIRSIFGTFGELEEAVVILDKNTGKSKGYGFVTFKHVDGALLALKQPSKHVDGRVTVTQLASAGIQGGPGGGSSNNPVDVSLRKIYVSNVPYDMQSERILQHFLMYGEIEEGPLGFDKATGKSKGYALFVYKTAEAAQSSLVDPVKNIDGHQLNCKLAIDG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="81464" PGL_stop="89154"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81464" e_stop="81542"/>
            <exon e_start="84268" e_stop="84704"/>
            <exon e_start="84783" e_stop="84845"/>
            <exon e_start="85164" e_stop="85201"/>
            <exon e_start="86612" e_stop="87041"/>
            <exon e_start="87466" e_stop="87938"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.930" e_score="1.000"/>
          <exon-intron don_prob="0.907" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.767" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.927" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.993" e_score="0.997"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81464" e_stop="81542" e_length="79"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.930">
            <gDNA_intron_boundary i_start="81543" i_stop="84267" i_length="2725"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="84268" e_stop="84704" e_length="437"/>
          </exon>
          <intron i_serial="2" don_prob="0.907" acc_prob="0.970">
            <gDNA_intron_boundary i_start="84705" i_stop="84782" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="84783" e_stop="84845" e_length="63"/>
          </exon>
          <intron i_serial="3" don_prob="0.767" acc_prob="0.998">
            <gDNA_intron_boundary i_start="84846" i_stop="85163" i_length="318"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="85164" e_stop="85201" e_length="38"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.927">
            <gDNA_intron_boundary i_start="85202" i_stop="86611" i_length="1410"/>
          </intron>
          <exon e_serial="5" e_score="0.997">
            <gDNA_exon_boundary e_start="86612" e_stop="87041" e_length="430"/>
          </exon>
          <intron i_serial="5" don_prob="0.960" acc_prob="0.993">
            <gDNA_intron_boundary i_start="87042" i_stop="87465" i_length="424"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="87466" e_stop="87938" e_length="473"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81464" stop="81542"/>
              <exon start="84268" stop="84678"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317675" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81473" stop="81542"/>
              <exon start="84268" stop="84704"/>
              <exon start="84783" stop="84845"/>
              <exon start="85164" stop="85201"/>
              <exon start="86612" stop="86732"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412841" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81473" stop="81542"/>
              <exon start="84268" stop="84607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E471259" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81497" stop="81542"/>
              <exon start="84268" stop="84704"/>
              <exon start="84783" stop="84845"/>
              <exon start="85164" stop="85201"/>
              <exon start="86612" stop="86731"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322400" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81497" stop="81542"/>
              <exon start="84268" stop="84704"/>
              <exon start="84783" stop="84845"/>
              <exon start="85164" stop="85201"/>
              <exon start="86612" stop="86730"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E322167" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81502" stop="81542"/>
              <exon start="84268" stop="84704"/>
              <exon start="84783" stop="84845"/>
              <exon start="85164" stop="85197"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86675" stop="87041"/>
              <exon start="87466" stop="87938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734109" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTGTGGGAAACAAAATAATAAAGAGAAGCAGTTATCTGAAACGTATGGTTGATGCGTCTCTCAATCTTCTTCTCCAT : GAAATTATCTCCTTCTCACCTTCCTATCAATACCACACATAGCACTTTTCTCTCCCCAACTTCAGTCTGTGCGGCTGAGTATACACGAAGCAGGCTGAGCATATTAAAGTTAATCTGTCATGCATCTATGGTTCAGAAATATTCCCTATCAGGCTTTGCTGTTTCATCCGAAAGAGAAGGCTCATATAAACTGGTGTATGCCAGAAATGGCTCGGCAGAGATGTTGCAGCTAATGAGATGTAATGCAAGAAGCCAAAGTGATAATGTGTCCAAGGGGCAAGTTTTAACTAATGACTTTCAAGAAGAGGACTATTCCAACAAGGACAAGGGTTTTAACAGCAAGGATGGTAAGGAAAAGGAAGTAGACAGAAGAAGAAAGATTGGATTAGCAAACAGAGGAAAAGTGCCATGGAACAAAGGCAGAAAACATAGTCCAG : AGACTCGTGAGAAGATCAGACAGAGAACCAAAGAAGCTTTGCGTGATCCCAAGGTGAAGTCAT : GTAAGACAAAAGATGTCTGAATGTCCACGCTCTCTTAG : CAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATTAAAATGGAAAAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGCTAAGGTAGGTGGGAGCGACCAAGAAGAATTAGAATGGGACAGCTACGACAAGATCAAAAGAGAGATAGCTCTCGAACGACTTCAGTTGGCTGCAGAAAAGGCCAAGGCAAAAGAAATCACACGCATACGAGCTGAGAGAGCAGCACAGAGAAAGACGGAAAGGATGCAGAGACTTGTTCAAAGGAGAAAAGAACGAGAAGAAAAGCAAAAAGTTGAAGGAAAAACGAAGAGACCAAGAAGACGGTCAAAGCAAGAGAAAGAAGAGTTAGCTGTTGCTGAAGAATTGAAACTCAAGGCGAAATTAGTGAAG : ATTCAGAAGAAAAAGTCCACACTTAGCCATGTTTGTAGAGAACATCGACAAGCTTGGGAGAAACTCGATGTAGCATTCATAAAGAGACCTCAAGTACAAAAAACAGTTTCTCTTGCAGATCAGATTCGTGCTGCCAAGAAGAGAACAATGGATGTGAATGAAAAAGCCTTTGGTATTACATCCTCCAACTCTCAATCTATTGAAGTATCTGCAGAGGCTAAATTCATCACAGTGGAAACAAAATGACAGAAGTATTTTCTCCAATCATTTAGCTACTTGCATTGGCATATGAGAATGTCTGGACAACTTAGCCTCCGTCTTCGTTGGGAGCTTTTTGTCCTTGGACATCACTCATATGATGGAGAAACCGCATGTTAGAATTTTCAATTTCAGGAATACCATAAGCTACCTGTAGAAAAAGAAATGGGAAAAGGAAAAAAGCAGCTTGTGATATTCAAGTTATGCAAAAAAAA</gDNA_template>
            <first_frame> N  C  G  K  Q  N  N  K  E  K  Q  L  S  E  T  Y  G  *  C  V  S  Q  S  S  S  P   : *  N  Y  L  L  L  T  F  L  S  I  P  H  I  A  L  F  S  P  Q  L  Q  S  V  R  L  S  I  H  E  A  G  *  A  Y  *  S  *  S  V  M  H  L  W  F  R  N  I  P  Y  Q  A  L  L  F  H  P  K  E  K  A  H  I  N  W  C  M  P  E  M  A  R  Q  R  C  C  S  *  *  D  V  M  Q  E  A  K  V  I  M  C  P  R  G  K  F  *  L  M  T  F  K  K  R  T  I  P  T  R  T  R  V  L  T  A  R  M  V  R  K  R  K  *  T  E  E  E  R  L  D  *  Q  T  E  E  K  C  H  G  T  K  A  E  N  I  V  Q  :  R  L  V  R  R  S  D  R  E  P  K  K  L  C  V  I  P  R  *  S  H  :  V  R  Q  K  M  S  E  C  P  R  S  L  S :   N  Q  T  K  L  R  I  R  A  S  L  R  K  L  W  G  E  R  L  K  W  K  R  S  R  E  K  F  F  Q  S  W  A  E  S  I  A  N  A  A  K  V  G  G  S  D  Q  E  E  L  E  W  D  S  Y  D  K  I  K  R  E  I  A  L  E  R  L  Q  L  A  A  E  K  A  K  A  K  E  I  T  R  I  R  A  E  R  A  A  Q  R  K  T  E  R  M  Q  R  L  V  Q  R  R  K  E  R  E  E  K  Q  K  V  E  G  K  T  K  R  P  R  R  R  S  K  Q  E  K  E  E  L  A  V  A  E  E  L  K  L  K  A  K  L  V  K  :  I  Q  K  K  K  S  T  L  S  H  V  C  R  E  H  R  Q  A  W  E  K  L  D  V  A  F  I  K  R  P  Q  V  Q  K  T  V  S  L  A  D  Q  I  R  A  A  K  K  R  T  M  D  V  N  E  K  A  F  G  I  T  S  S  N  S  Q  S  I  E  V  S  A  E  A  K  F  I  T  V  E  T  K  *  Q  K  Y  F  L  Q  S  F  S  Y  L  H  W  H  M  R  M  S  G  Q  L  S  L  R  L  R  W  E  L  F  V  L  G  H  H  S  Y  D  G  E  T  A  C  *  N  F  Q  F  Q  E  Y  H  K  L  P  V  E  K  E  M  G  K  G  K  K  Q  L  V  I  F  K  L  C  K  K   </first_frame>
            <second_frame>  I  V  G  N  K  I  I  K  R  S  S  Y  L  K  R  M  V  D  A  S  L  N  L  L  L  H  :  E  I  I  S  F  S  P  S  Y  Q  Y  H  T  *  H  F  S  L  P  N  F  S  L  C  G  *  V  Y  T  K  Q  A  E  H  I  K  V  N  L  S  C  I  Y  G  S  E  I  F  P  I  R  L  C  C  F  I  R  K  R  R  L  I  *  T  G  V  C  Q  K  W  L  G  R  D  V  A  A  N  E  M  *  C  K  K  P  K  *  *  C  V  Q  G  A  S  F  N  *  *  L  S  R  R  G  L  F  Q  Q  G  Q  G  F  *  Q  Q  G  W  *  G  K  G  S  R  Q  K  K  K  D  W  I  S  K  Q  R  K  S  A  M  E  Q  R  Q  K  T  *  S  R :   D  S  *  E  D  Q  T  E  N  Q  R  S  F  A  *  S  Q  G  E  V  M :   *  D  K  R  C  L  N  V  H  A  L  L   : A  I  R  P  S  Y  E  Y  A  H  L  S  E  N  S  G  V  N  D  *  N  G  K  G  H  G  R  N  F  F  S  H  G  L  K  A  L  Q  M  L  L  R  *  V  G  A  T  K  K  N  *  N  G  T  A  T  T  R  S  K  E  R  *  L  S  N  D  F  S  W  L  Q  K  R  P  R  Q  K  K  S  H  A  Y  E  L  R  E  Q  H  R  E  R  R  K  G  C  R  D  L  F  K  G  E  K  N  E  K  K  S  K  K  L  K  E  K  R  R  D  Q  E  D  G  Q  S  K  R  K  K  S  *  L  L  L  K  N  *  N  S  R  R  N  *  *  R :   F  R  R  K  S  P  H  L  A  M  F  V  E  N  I  D  K  L  G  R  N  S  M  *  H  S  *  R  D  L  K  Y  K  K  Q  F  L  L  Q  I  R  F  V  L  P  R  R  E  Q  W  M  *  M  K  K  P  L  V  L  H  P  P  T  L  N  L  L  K  Y  L  Q  R  L  N  S  S  Q  W  K  Q  N  D  R  S  I  F  S  N  H  L  A  T  C  I  G  I  *  E  C  L  D  N  L  A  S  V  F  V  G  S  F  L  S  L  D  I  T  H  M  M  E  K  P  H  V  R  I  F  N  F  R  N  T  I  S  Y  L  *  K  K  K  W  E  K  E  K  S  S  L  *  Y  S  S  Y  A  K  K  </second_frame>
            <third_frame>   L  W  E  T  K  *  *  R  E  A  V  I  *  N  V  W  L  M  R  L  S  I  F  F  S  M :   K  L  S  P  S  H  L  P  I  N  T  T  H  S  T  F  L  S  P  T  S  V  C  A  A  E  Y  T  R  S  R  L  S  I  L  K  L  I  C  H  A  S  M  V  Q  K  Y  S  L  S  G  F  A  V  S  S  E  R  E  G  S  Y  K  L  V  Y  A  R  N  G  S  A  E  M  L  Q  L  M  R  C  N  A  R  S  Q  S  D  N  V  S  K  G  Q  V  L  T  N  D  F  Q  E  E  D  Y  S  N  K  D  K  G  F  N  S  K  D  G  K  E  K  E  V  D  R  R  R  K  I  G  L  A  N  R  G  K  V  P  W  N  K  G  R  K  H  S  P   : E  T  R  E  K  I  R  Q  R  T  K  E  A  L  R  D  P  K  V  K  S   : C  K  T  K  D  V  *  M  S  T  L  S  *  :  Q  S  D  Q  V  T  N  T  R  I  S  Q  K  T  L  G  *  T  I  K  M  E  K  V  T  G  E  I  F  S  V  M  G  *  K  H  C  K  C  C  *  G  R  W  E  R  P  R  R  I  R  M  G  Q  L  R  Q  D  Q  K  R  D  S  S  R  T  T  S  V  G  C  R  K  G  Q  G  K  R  N  H  T  H  T  S  *  E  S  S  T  E  K  D  G  K  D  A  E  T  C  S  K  E  K  R  T  R  R  K  A  K  S  *  R  K  N  E  E  T  K  K  T  V  K  A  R  E  R  R  V  S  C  C  *  R  I  E  T  Q  G  E  I  S  E   : D  S  E  E  K  V  H  T  *  P  C  L  *  R  T  S  T  S  L  G  E  T  R  C  S  I  H  K  E  T  S  S  T  K  N  S  F  S  C  R  S  D  S  C  C  Q  E  E  N  N  G  C  E  *  K  S  L  W  Y  Y  I  L  Q  L  S  I  Y  *  S  I  C  R  G  *  I  H  H  S  G  N  K  M  T  E  V  F  S  P  I  I  *  L  L  A  L  A  Y  E  N  V  W  T  T  *  P  P  S  S  L  G  A  F  C  P  W  T  S  L  I  *  W  R  N  R  M  L  E  F  S  I  S  G  I  P  *  A  T  C  R  K  R  N  G  K  R  K  K  A  A  C  D  I  Q  V  M  Q  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84840" stop="84845"/>
                    <exon start="85164" stop="85201"/>
                    <exon start="86612" stop="87041"/>
                    <exon start="87466" stop="87711"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>717</number_coding_nucleotides>
                  <number_encoded_amino_acids>239</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SHVRQKMSECPRSLSNQTKLRIRASLRKLWGERLKWKRSREKFFQSWAESIANAAKVGGSDQEELEWDSYDKIKREIALERLQLAAEKAKAKEITRIRAERAAQRKTERMQRLVQRRKEREEKQKVEGKTKRPRRRSKQEKEELAVAEELKLKAKLVKIQKKKSTLSHVCREHRQAWEKLDVAFIKRPQVQKTVSLADQIRAAKKRTMDVNEKAFGITSSNSQSIEVSAEAKFITVETK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81505" stop="81542"/>
                    <exon start="84268" stop="84704"/>
                    <exon start="84783" stop="84845"/>
                    <exon start="85164" stop="85183"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NVWLMRLSIFFSMKLSPSHLPINTTHSTFLSPTSVCAAEYTRSRLSILKLICHASMVQKYSLSGFAVSSEREGSYKLVYARNGSAEMLQLMRCNARSQSDNVSKGQVLTNDFQEEDYSNKDKGFNSKDGKEKEVDRRRKIGLANRGKVPWNKGRKHSPETREKIRQRTKEALRDPKVKSCKTKDV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88501" e_stop="89154"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="88501" e_stop="89154" e_length="654"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88501" stop="88899"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280153" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88522" stop="89154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E549096" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTAATATGATGATGAACACTGGAAAAAAATAAAAGGAAATCCCAATAATTTTTGGCACTGCATAACTCAATATGTAAAATTCGTACTTCCAACTATTATGAGGACAACGTGCTATCAAAACTCCATTAAGACATTACTTTGTGAAGATAAACCATCTAGCATTGACAACTAAACACGTATCTACAGCTGCTCATCGGTAATTAGAATTGGACATATCTCTACCAGCCATGTTTGGATTCTGATAGGAGTTCCCATCAGATGTATTAGGAGCGTAGCTCTGGTTTGGCCCTGGACCTGTTTGGTAAGGCGTGTCTCCATTGTTCTGTCCACCACCATTGTATTGGAAATTACGTGCGTTGTTTGGCATTCCGTAGTTATTGGGAGGCACTCCACCCATGTTTGGTGGCATATTCGGCTGCTGCATCCCACCTCCACGGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCTGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCAGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTGGTCCTCTCATGTCCGGCTGCTGCATACCGCCTGCATGAGGTGGTGGCCCTCCATAGCCTTGCT</gDNA_template>
            <first_frame> V  I  *  *  *  T  L  E  K  N  K  R  K  S  Q  *  F  L  A  L  H  N  S  I  C  K  I  R  T  S  N  Y  Y  E  D  N  V  L  S  K  L  H  *  D  I  T  L  *  R  *  T  I  *  H  *  Q  L  N  T  Y  L  Q  L  L  I  G  N  *  N  W  T  Y  L  Y  Q  P  C  L  D  S  D  R  S  S  H  Q  M  Y  *  E  R  S  S  G  L  A  L  D  L  F  G  K  A  C  L  H  C  S  V  H  H  H  C  I  G  N  Y  V  R  C  L  A  F  R  S  Y  W  E  A  L  H  P  C  L  V  A  Y  S  A  A  A  S  H  L  H  G  V  A  L  S  C  P  A  A  A  S  R  L  H  E  V  V  A  L  H  S  L  A  A  A  W  V  A  L  S  C  P  A  A  A  S  R  Q  H  E  V  V  A  L  H  S  L  A  A  A  W  V  V  L  S  C  P  A  A  A  Y  R  L  H  E  V  V  A  L  H  S  L  A </first_frame>
            <second_frame>  *  Y  D  D  E  H  W  K  K  I  K  G  N  P  N  N  F  W  H  C  I  T  Q  Y  V  K  F  V  L  P  T  I  M  R  T  T  C  Y  Q  N  S  I  K  T  L  L  C  E  D  K  P  S  S  I  D  N  *  T  R  I  Y  S  C  S  S  V  I  R  I  G  H  I  S  T  S  H  V  W  I  L  I  G  V  P  I  R  C  I  R  S  V  A  L  V  W  P  W  T  C  L  V  R  R  V  S  I  V  L  S  T  T  I  V  L  E  I  T  C  V  V  W  H  S  V  V  I  G  R  H  S  T  H  V  W  W  H  I  R  L  L  H  P  T  S  T  G  W  P  S  H  V  R  L  L  H  P  A  C  M  R  W  W  P  S  I  A  L  L  L  H  G  W  P  S  H  V  R  L  L  H  P  A  S  M  R  W  W  P  S  I  A  L  L  L  H  G  W  S  S  H  V  R  L  L  H  T  A  C  M  R  W  W  P  S  I  A  L   </second_frame>
            <third_frame>   N  M  M  M  N  T  G  K  K  *  K  E  I  P  I  I  F  G  T  A  *  L  N  M  *  N  S  Y  F  Q  L  L  *  G  Q  R  A  I  K  T  P  L  R  H  Y  F  V  K  I  N  H  L  A  L  T  T  K  H  V  S  T  A  A  H  R  *  L  E  L  D  I  S  L  P  A  M  F  G  F  *  *  E  F  P  S  D  V  L  G  A  *  L  W  F  G  P  G  P  V  W  *  G  V  S  P  L  F  C  P  P  P  L  Y  W  K  L  R  A  L  F  G  I  P  *  L  L  G  G  T  P  P  M  F  G  G  I  F  G  C  C  I  P  P  P  R  G  G  P  L  M  S  G  C  C  I  P  P  A  *  G  G  G  P  P  *  P  C  C  C  M  G  G  P  L  M  S  G  C  C  I  P  P  A  *  G  G  G  P  P  *  P  C  C  C  M  G  G  P  L  M  S  G  C  C  I  P  P  A  *  G  G  G  P  P  *  P  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88673" stop="89152"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRIYSCSSVIRIGHISTSHVWILIGVPIRCIRSVALVWPWTCLVRRVSIVLSTTIVLEITCVVWHSVVIGRHSTHVWWHIRLLHPTSTGWPSHVRLLHPACMRWWPSIALLLHGWPSHVRLLHPASMRWWPSIALLLHGWSSHVRLLHTACMRWWPSIAL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="85928" e_stop="86227"/>
            <exon e_start="86281" e_stop="86285"/>
            <exon e_start="86612" e_stop="87041"/>
            <exon e_start="87466" e_stop="87938"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.873" acc_prob="0.988" e_score="0.967"/>
          <exon-intron don_prob="0.000" acc_prob="0.927" e_score="0.800"/>
          <exon-intron don_prob="0.960" acc_prob="0.993" e_score="0.997"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="85928" e_stop="86227" e_length="300"/>
          </exon>
          <intron i_serial="1" don_prob="0.873" acc_prob="0.988">
            <gDNA_intron_boundary i_start="86228" i_stop="86280" i_length="53"/>
          </intron>
          <exon e_serial="2" e_score="0.800">
            <gDNA_exon_boundary e_start="86281" e_stop="86285" e_length="5"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.927">
            <gDNA_intron_boundary i_start="86286" i_stop="86611" i_length="326"/>
          </intron>
          <exon e_serial="3" e_score="0.997">
            <gDNA_exon_boundary e_start="86612" e_stop="87041" e_length="430"/>
          </exon>
          <intron i_serial="3" don_prob="0.960" acc_prob="0.993">
            <gDNA_intron_boundary i_start="87042" i_stop="87465" i_length="424"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="87466" e_stop="87938" e_length="473"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85928" stop="86227"/>
              <exon start="86281" stop="86285"/>
              <exon start="86612" stop="86950"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413380" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86675" stop="87041"/>
              <exon start="87466" stop="87938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734109" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGAAAGTTTAGTTTCCTCATTGTGAAACGTTAATTTACTAGAATGTATCAACAAAATCATTGCCACCATAAGTTATCTTCCAAAGGAAAGAGGGGTCACAAGGAACAAATCAGGCTGAAATGTTGTCCACATGATTTTGCAAAGAGGAATATCAAGATATAAGAGCTTTAAAAGCTCCCTCTAAGTCAAGAGGCAAATTTTCAGCAGACCTGCACCCTGTTTCAAACTGTGCGCACAACCAGTCATAGTTGACCAGCAAGAAGAACCTGCTCCTGCTAAGCCGCACATAAACTGCTAA : GTTGT : CAATCAGACCAAGTTACGAATACGCGCATCTCTCAGAAAACTCTGGGGTGAACGATTAAAATGGAAAAGGTCACGGGAGAAATTTTTTCAGTCATGGGCTGAAAGCATTGCAAATGCTGCTAAGGTAGGTGGGAGCGACCAAGAAGAATTAGAATGGGACAGCTACGACAAGATCAAAAGAGAGATAGCTCTCGAACGACTTCAGTTGGCTGCAGAAAAGGCCAAGGCAAAAGAAATCACACGCATACGAGCTGAGAGAGCAGCACAGAGAAAGACGGAAAGGATGCAGAGACTTGTTCAAAGGAGAAAAGAACGAGAAGAAAAGCAAAAAGTTGAAGGAAAAACGAAGAGACCAAGAAGACGGTCAAAGCAAGAGAAAGAAGAGTTAGCTGTTGCTGAAGAATTGAAACTCAAGGCGAAATTAGTGAAG : ATTCAGAAGAAAAAGTCCACACTTAGCCATGTTTGTAGAGAACATCGACAAGCTTGGGAGAAACTCGATGTAGCATTCATAAAGAGACCTCAAGTACAAAAAACAGTTTCTCTTGCAGATCAGATTCGTGCTGCCAAGAAGAGAACAATGGATGTGAATGAAAAAGCCTTTGGTATTACATCCTCCAACTCTCAATCTATTGAAGTATCTGCAGAGGCTAAATTCATCACAGTGGAAACAAAATGACAGAAGTATTTTCTCCAATCATTTAGCTACTTGCATTGGCATATGAGAATGTCTGGACAACTTAGCCTCCGTCTTCGTTGGGAGCTTTTTGTCCTTGGACATCACTCATATGATGGAGAAACCGCATGTTAGAATTTTCAATTTCAGGAATACCATAAGCTACCTGTAGAAAAAGAAATGGGAAAAGGAAAAAAGCAGCTTGTGATATTCAAGTTATGCAAAAAAAA</gDNA_template>
            <first_frame> K  E  S  L  V  S  S  L  *  N  V  N  L  L  E  C  I  N  K  I  I  A  T  I  S  Y  L  P  K  E  R  G  V  T  R  N  K  S  G  *  N  V  V  H  M  I  L  Q  R  G  I  S  R  Y  K  S  F  K  S  S  L  *  V  K  R  Q  I  F  S  R  P  A  P  C  F  K  L  C  A  Q  P  V  I  V  D  Q  Q  E  E  P  A  P  A  K  P  H  I  N  C  *  :  V  V :   N  Q  T  K  L  R  I  R  A  S  L  R  K  L  W  G  E  R  L  K  W  K  R  S  R  E  K  F  F  Q  S  W  A  E  S  I  A  N  A  A  K  V  G  G  S  D  Q  E  E  L  E  W  D  S  Y  D  K  I  K  R  E  I  A  L  E  R  L  Q  L  A  A  E  K  A  K  A  K  E  I  T  R  I  R  A  E  R  A  A  Q  R  K  T  E  R  M  Q  R  L  V  Q  R  R  K  E  R  E  E  K  Q  K  V  E  G  K  T  K  R  P  R  R  R  S  K  Q  E  K  E  E  L  A  V  A  E  E  L  K  L  K  A  K  L  V  K  :  I  Q  K  K  K  S  T  L  S  H  V  C  R  E  H  R  Q  A  W  E  K  L  D  V  A  F  I  K  R  P  Q  V  Q  K  T  V  S  L  A  D  Q  I  R  A  A  K  K  R  T  M  D  V  N  E  K  A  F  G  I  T  S  S  N  S  Q  S  I  E  V  S  A  E  A  K  F  I  T  V  E  T  K  *  Q  K  Y  F  L  Q  S  F  S  Y  L  H  W  H  M  R  M  S  G  Q  L  S  L  R  L  R  W  E  L  F  V  L  G  H  H  S  Y  D  G  E  T  A  C  *  N  F  Q  F  Q  E  Y  H  K  L  P  V  E  K  E  M  G  K  G  K  K  Q  L  V  I  F  K  L  C  K  K   </first_frame>
            <second_frame>  K  K  V  *  F  P  H  C  E  T  L  I  Y  *  N  V  S  T  K  S  L  P  P  *  V  I  F  Q  R  K  E  G  S  Q  G  T  N  Q  A  E  M  L  S  T  *  F  C  K  E  E  Y  Q  D  I  R  A  L  K  A  P  S  K  S  R  G  K  F  S  A  D  L  H  P  V  S  N  C  A  H  N  Q  S  *  L  T  S  K  K  N  L  L  L  L  S  R  T  *  T  A  K :   L   : S  I  R  P  S  Y  E  Y  A  H  L  S  E  N  S  G  V  N  D  *  N  G  K  G  H  G  R  N  F  F  S  H  G  L  K  A  L  Q  M  L  L  R  *  V  G  A  T  K  K  N  *  N  G  T  A  T  T  R  S  K  E  R  *  L  S  N  D  F  S  W  L  Q  K  R  P  R  Q  K  K  S  H  A  Y  E  L  R  E  Q  H  R  E  R  R  K  G  C  R  D  L  F  K  G  E  K  N  E  K  K  S  K  K  L  K  E  K  R  R  D  Q  E  D  G  Q  S  K  R  K  K  S  *  L  L  L  K  N  *  N  S  R  R  N  *  *  R :   F  R  R  K  S  P  H  L  A  M  F  V  E  N  I  D  K  L  G  R  N  S  M  *  H  S  *  R  D  L  K  Y  K  K  Q  F  L  L  Q  I  R  F  V  L  P  R  R  E  Q  W  M  *  M  K  K  P  L  V  L  H  P  P  T  L  N  L  L  K  Y  L  Q  R  L  N  S  S  Q  W  K  Q  N  D  R  S  I  F  S  N  H  L  A  T  C  I  G  I  *  E  C  L  D  N  L  A  S  V  F  V  G  S  F  L  S  L  D  I  T  H  M  M  E  K  P  H  V  R  I  F  N  F  R  N  T  I  S  Y  L  *  K  K  K  W  E  K  E  K  S  S  L  *  Y  S  S  Y  A  K  K  </second_frame>
            <third_frame>   R  K  F  S  F  L  I  V  K  R  *  F  T  R  M  Y  Q  Q  N  H  C  H  H  K  L  S  S  K  G  K  R  G  H  K  E  Q  I  R  L  K  C  C  P  H  D  F  A  K  R  N  I  K  I  *  E  L  *  K  L  P  L  S  Q  E  A  N  F  Q  Q  T  C  T  L  F  Q  T  V  R  T  T  S  H  S  *  P  A  R  R  T  C  S  C  *  A  A  H  K  L  L   : S  C  :  Q  S  D  Q  V  T  N  T  R  I  S  Q  K  T  L  G  *  T  I  K  M  E  K  V  T  G  E  I  F  S  V  M  G  *  K  H  C  K  C  C  *  G  R  W  E  R  P  R  R  I  R  M  G  Q  L  R  Q  D  Q  K  R  D  S  S  R  T  T  S  V  G  C  R  K  G  Q  G  K  R  N  H  T  H  T  S  *  E  S  S  T  E  K  D  G  K  D  A  E  T  C  S  K  E  K  R  T  R  R  K  A  K  S  *  R  K  N  E  E  T  K  K  T  V  K  A  R  E  R  R  V  S  C  C  *  R  I  E  T  Q  G  E  I  S  E   : D  S  E  E  K  V  H  T  *  P  C  L  *  R  T  S  T  S  L  G  E  T  R  C  S  I  H  K  E  T  S  S  T  K  N  S  F  S  C  R  S  D  S  C  C  Q  E  E  N  N  G  C  E  *  K  S  L  W  Y  Y  I  L  Q  L  S  I  Y  *  S  I  C  R  G  *  I  H  H  S  G  N  K  M  T  E  V  F  S  P  I  I  *  L  L  A  L  A  Y  E  N  V  W  T  T  *  P  P  S  S  L  G  A  F  C  P  W  T  S  L  I  *  W  R  N  R  M  L  E  F  S  I  S  G  I  P  *  A  T  C  R  K  R  N  G  K  R  K  K  A  A  C  D  I  Q  V  M  Q  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86281" stop="86285"/>
                    <exon start="86612" stop="87041"/>
                    <exon start="87466" stop="87711"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>678</number_coding_nucleotides>
                  <number_encoded_amino_acids>226</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVNQTKLRIRASLRKLWGERLKWKRSREKFFQSWAESIANAAKVGGSDQEELEWDSYDKIKREIALERLQLAAEKAKAKEITRIRAERAAQRKTERMQRLVQRRKEREEKQKVEGKTKRPRRRSKQEKEELAVAEELKLKAKLVKIQKKKSTLSHVCREHRQAWEKLDVAFIKRPQVQKTVSLADQIRAAKKRTMDVNEKAFGITSSNSQSIEVSAEAKFITVETK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="85656" e_stop="85681"/>
            <exon e_start="86281" e_stop="86300"/>
            <exon e_start="86447" e_stop="86456"/>
            <exon e_start="87360" e_stop="87446"/>
            <exon e_start="88532" e_stop="89091"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.954" acc_prob="0.988" e_score="0.577"/>
          <exon-intron don_prob="0.000" acc_prob="0.133" e_score="0.550"/>
          <exon-intron don_prob="0.936" acc_prob="0.000" e_score="0.600"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.460"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.577">
            <gDNA_exon_boundary e_start="85656" e_stop="85681" e_length="26"/>
          </exon>
          <intron i_serial="1" don_prob="0.954" acc_prob="0.988">
            <gDNA_intron_boundary i_start="85682" i_stop="86280" i_length="599"/>
          </intron>
          <exon e_serial="2" e_score="0.550">
            <gDNA_exon_boundary e_start="86281" e_stop="86300" e_length="20"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.133">
            <gDNA_intron_boundary i_start="86301" i_stop="86446" i_length="146"/>
          </intron>
          <exon e_serial="3" e_score="0.600">
            <gDNA_exon_boundary e_start="86447" e_stop="86456" e_length="10"/>
          </exon>
          <intron i_serial="3" don_prob="0.936" acc_prob="0.000">
            <gDNA_intron_boundary i_start="86457" i_stop="87359" i_length="903"/>
          </intron>
          <exon e_serial="4" e_score="0.460">
            <gDNA_exon_boundary e_start="87360" e_stop="87446" e_length="87"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="87447" i_stop="88531" i_length="1085"/>
          </intron>
          <exon e_serial="5" e_score="0.998">
            <gDNA_exon_boundary e_start="88532" e_stop="89091" e_length="560"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85656" stop="85681"/>
              <exon start="86281" stop="86300"/>
              <exon start="86447" stop="86456"/>
              <exon start="87360" stop="87446"/>
              <exon start="88532" stop="89091"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E723643" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAATATTTTGCTTAAAGTTCCAACT : GTTGTGTGATGACGTCTAAA : GAAGTTGCAA : TGATGCCATATCCTCTATGTTCACAGTTCTTCTGTAATTAAAATGTTGTCATCTTGGTGCCTTCTTTTTTGTGTTATTACTGATGCG : AAAGGAAATCCCAATAATTTTTGGCACTGCATAACTCAATATGTAAAATTCGTACTTCCAACTATTATGAGGACAACGTGCTATCAAAACTCCATTAAGACATTACTTTGTGAAGATAAACCATCTAGCATTGACAACTAAACACGTATCTACAGCTGCTCATCGGTAATTAGAATTGGACATATCTCTACCAGCCATGTTTGGATTCTGATAGGAGTTCCCATCAGATGTATTAGGAGCGTAGCTCTGGTTTGGCCCTGGACCTGTTTGGTAAGGCGTGTCTCCATTGTTCTGTCCACCACCATTGTATTGGAAATTACGTGCGTTGTTTGGCATTCCGTAGTTATTGGGAGGCACTCCACCCATGTTTGGTGGCATATTCGGCTGCTGCATCCCACCTCCACGGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCTGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTGGCCCTCTCATGTCCGGCTGCTGCATCCCGCCAGCATGAGGTGGTGGCCCTCCATAGCCTTGCTGCTGCATGGGTG</gDNA_template>
            <first_frame> K  I  F  C  L  K  F  Q  L :   L  C  D  D  V  *   : R  S  C  N :   D  A  I  S  S  M  F  T  V  L  L  *  L  K  C  C  H  L  G  A  F  F  F  V  L  L  L  M  R :   K  E  I  P  I  I  F  G  T  A  *  L  N  M  *  N  S  Y  F  Q  L  L  *  G  Q  R  A  I  K  T  P  L  R  H  Y  F  V  K  I  N  H  L  A  L  T  T  K  H  V  S  T  A  A  H  R  *  L  E  L  D  I  S  L  P  A  M  F  G  F  *  *  E  F  P  S  D  V  L  G  A  *  L  W  F  G  P  G  P  V  W  *  G  V  S  P  L  F  C  P  P  P  L  Y  W  K  L  R  A  L  F  G  I  P  *  L  L  G  G  T  P  P  M  F  G  G  I  F  G  C  C  I  P  P  P  R  G  G  P  L  M  S  G  C  C  I  P  P  A  *  G  G  G  P  P  *  P  C  C  C  M  G  G  P  L  M  S  G  C  C  I  P  P  A  *  G  G  G  P  P  *  P  C  C  C  M  G  </first_frame>
            <second_frame>  K  Y  F  A  *  S  S  N   : C  C  V  M  T  S  K  :  E  V  A   : M  M  P  Y  P  L  C  S  Q  F  F  C  N  *  N  V  V  I  L  V  P  S  F  L  C  Y  Y  *  C   : E  R  K  S  Q  *  F  L  A  L  H  N  S  I  C  K  I  R  T  S  N  Y  Y  E  D  N  V  L  S  K  L  H  *  D  I  T  L  *  R  *  T  I  *  H  *  Q  L  N  T  Y  L  Q  L  L  I  G  N  *  N  W  T  Y  L  Y  Q  P  C  L  D  S  D  R  S  S  H  Q  M  Y  *  E  R  S  S  G  L  A  L  D  L  F  G  K  A  C  L  H  C  S  V  H  H  H  C  I  G  N  Y  V  R  C  L  A  F  R  S  Y  W  E  A  L  H  P  C  L  V  A  Y  S  A  A  A  S  H  L  H  G  V  A  L  S  C  P  A  A  A  S  R  L  H  E  V  V  A  L  H  S  L  A  A  A  W  V  A  L  S  C  P  A  A  A  S  R  Q  H  E  V  V  A  L  H  S  L  A  A  A  W  V </second_frame>
            <third_frame>   N  I  L  L  K  V  P  T  :  V  V  *  *  R  L  K :   K  L  Q  :  *  C  H  I  L  Y  V  H  S  S  S  V  I  K  M  L  S  S  W  C  L  L  F  C  V  I  T  D  A  :  K  G  N  P  N  N  F  W  H  C  I  T  Q  Y  V  K  F  V  L  P  T  I  M  R  T  T  C  Y  Q  N  S  I  K  T  L  L  C  E  D  K  P  S  S  I  D  N  *  T  R  I  Y  S  C  S  S  V  I  R  I  G  H  I  S  T  S  H  V  W  I  L  I  G  V  P  I  R  C  I  R  S  V  A  L  V  W  P  W  T  C  L  V  R  R  V  S  I  V  L  S  T  T  I  V  L  E  I  T  C  V  V  W  H  S  V  V  I  G  R  H  S  T  H  V  W  W  H  I  R  L  L  H  P  T  S  T  G  W  P  S  H  V  R  L  L  H  P  A  C  M  R  W  W  P  S  I  A  L  L  L  H  G  W  P  S  H  V  R  L  L  H  P  A  S  M  R  W  W  P  S  I  A  L  L  L  H  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88673" stop="89089"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>417</number_coding_nucleotides>
                  <number_encoded_amino_acids>139</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TRIYSCSSVIRIGHISTSHVWILIGVPIRCIRSVALVWPWTCLVRRVSIVLSTTIVLEITCVVWHSVVIGRHSTHVWWHIRLLHPTSTGWPSHVRLLHPACMRWWPSIALLLHGWPSHVRLLHPASMRWWPSIALLLHG</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87363" stop="87446"/>
                    <exon start="88532" stop="88672"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CHILYVHSSSVIKMLSSWCLLFCVITDAKGNPNNFWHCITQYVKFVLPTIMRTTCYQNSIKTLLCEDKPSSIDN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="87948" PGL_stop="87697"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87948" e_stop="87697"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="87948" e_stop="87697" e_length="252"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87948" stop="87697"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232554" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87947" stop="87703"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232334" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCCTTTTTTTTTTTTTTTGCATAACTTGAATATCACAAGCTGCTTTTTTCCTTTTCCCATTTCTTTTTCTACAGGTAGCTTATGGTATTCCTGAAATTGAAAATTCTAACATGCGGTTTCTCCATCATATGAGTGATGTCCAAGGACAAAAAGCTCCCAACGAAGACGGAGGCTAAGTTGTCCAGACATTCTCATATGCCAATGCAAGTAGCTAAATGATTGGAGAAAATACTTCTGTCATTTTGTTTCCAC</gDNA_template>
            <first_frame> S  F  F  F  F  F  A  *  L  E  Y  H  K  L  L  F  S  F  S  H  F  F  F  Y  R  *  L  M  V  F  L  K  L  K  I  L  T  C  G  F  S  I  I  *  V  M  S  K  D  K  K  L  P  T  K  T  E  A  K  L  S  R  H  S  H  M  P  M  Q  V  A  K  *  L  E  K  I  L  L  S  F  C  F  H </first_frame>
            <second_frame>  P  F  F  F  F  L  H  N  L  N  I  T  S  C  F  F  P  F  P  I  S  F  S  T  G  S  L  W  Y  S  *  N  *  K  F  *  H  A  V  S  P  S  Y  E  *  C  P  R  T  K  S  S  Q  R  R  R  R  L  S  C  P  D  I  L  I  C  Q  C  K  *  L  N  D  W  R  K  Y  F  C  H  F  V  S   </second_frame>
            <third_frame>   L  F  F  F  F  C  I  T  *  I  S  Q  A  A  F  F  L  F  P  F  L  F  L  Q  V  A  Y  G  I  P  E  I  E  N  S  N  M  R  F  L  H  H  M  S  D  V  Q  G  Q  K  A  P  N  E  D  G  G  *  V  V  Q  T  F  S  Y  A  N  A  S  S  *  M  I  G  E  N  T  S  V  I  L  F  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12SLe0004H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="90745" PGL_stop="88016"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90745" e_stop="90360"/>
            <exon e_start="89885" e_stop="89788"/>
            <exon e_start="89681" e_stop="89616"/>
            <exon e_start="89457" e_stop="88541"/>
            <exon e_start="88058" e_stop="88016"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.875" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.929" e_score="1.000"/>
          <exon-intron don_prob="0.892" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.989"/>
          <exon-only e_score="0.558"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90745" e_stop="90360" e_length="386"/>
          </exon>
          <intron i_serial="1" don_prob="0.875" acc_prob="0.961">
            <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89885" e_stop="89788" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.929">
            <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89681" e_stop="89616" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.892" acc_prob="1.000">
            <gDNA_intron_boundary i_start="89615" i_stop="89458" i_length="158"/>
          </intron>
          <exon e_serial="4" e_score="0.989">
            <gDNA_exon_boundary e_start="89457" e_stop="88541" e_length="917"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88540" i_stop="88059" i_length="482"/>
          </intron>
          <exon e_serial="5" e_score="0.558">
            <gDNA_exon_boundary e_start="88058" e_stop="88016" e_length="43"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90745" stop="90360"/>
              <exon start="89885" stop="89788"/>
              <exon start="89681" stop="89616"/>
              <exon start="89457" stop="89339"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451180" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90730" stop="90360"/>
              <exon start="89885" stop="89788"/>
              <exon start="89681" stop="89616"/>
              <exon start="89457" stop="89242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729839" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90723" stop="90360"/>
              <exon start="89885" stop="89788"/>
              <exon start="89681" stop="89616"/>
              <exon start="89457" stop="89447"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90723" stop="90360"/>
              <exon start="89885" stop="89829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90715" stop="90360"/>
              <exon start="89885" stop="89788"/>
              <exon start="89681" stop="89616"/>
              <exon start="89457" stop="89171"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90712" stop="90360"/>
              <exon start="89885" stop="89788"/>
              <exon start="89681" stop="89616"/>
              <exon start="89457" stop="89343"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328021" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90712" stop="90360"/>
              <exon start="89885" stop="89788"/>
              <exon start="89681" stop="89616"/>
              <exon start="89457" stop="89374"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327982" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90434" stop="90360"/>
              <exon start="89885" stop="89788"/>
              <exon start="89681" stop="89616"/>
              <exon start="89457" stop="89054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E567592" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89863" stop="89788"/>
              <exon start="89681" stop="89616"/>
              <exon start="89457" stop="88756"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704331" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89364" stop="88616"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540328" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89363" stop="88832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88994" stop="88541"/>
              <exon start="88058" stop="88016"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544758" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTAGCTAGGGTTTTGTTGAAACGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG : TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG : AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAG : GGGAACCTTTTATCAATGGACAGGCTGTACCATATGACCCGAAATACCATGAGGAATGGGTGAGAAACAATGCTCGTGCTAATGAGAGAAACAGGCGCAATGACCGACCTCGTAATTTTGATAGGTCCAGAAACTTTGAGAGAAGAAGAGAGATGCAGAATCAACCCAGTCAGAACCCTGGATCTAACATGGCAGCAGGGGGGCCTCCCAACATGGGCGGCATGCAGCAACCTAACATGGGTGGAATGCACCAGCAGCAAGGCATGGGAGGGCCACCACCTCATGCAGGCGGGATGCACCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGTATGCAGCAGCCGGACATGAGAGGACCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCTGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCATGCAGCAGCAAGGCTATGGAGGGCCACCACCTCATGCAGGCGGGATGCAGCAGCCGGACATGAGAGGGCCACCCCGTGGAGGTGGGATGCAGCAGCCGAATATGCCACCAAACATGGGTGGAGTGCCTCCCAATAACTACGGAATGCCAAACAACGCACGTAATTTCCAATACAATGGTGGTGGACAGAACAATGGAGACACGCCTTACCAAACAGGTCCAGGGCCAAACCAGAGCTACGCTCCTAATACATCTGATGGGAACTCCTATCAGAATCCAAACATGGCTGGTAGAGATATGTCCAATTCTAATTACCGATGAGCAGCTGTAGATACGTGTTTAGTTGTCAATGCTAGATGGTTTATCTTCACAAAGTAATGTCTTAATGGAGTTTTGATAGCACGTTGTCCTCATAATAGTTGGAAGTACGAATTTTACATATTGAGTTATGCAGTGCCAAAAATTATTGGG : TTTTTCATGTTGATAAACAACGAAAAACTGCTGAATGTAACAC</gDNA_template>
            <first_frame> A  S  *  G  F  V  E  T  K  M  A  S  R  S  L  L  N  A  F  K  R  S  C  N  S  F  S  L  S  T  T  P  S  T  Y  S  L  H  L  L  R  P  L  H  A  V  A  A  N  L  R  N  V  S  P  A  P  T  P  F  S  R  G  F  A  T  R  Q  T  S  S  S  L  N  D  P  N  P  N  W  S  N  R  P  P  K  E  T  I  L  L  D  G  C  D  F  E  H  W  L  V  V  M  E  K  P  E  G  D  P  T  R  D  E  I  I  D  S  Y  I  K  T  L  A  T  I  V  G  S :   E  E  E  A  R  M  K  I  Y  S  V  S  T  R  H  Y  F  A  F  G  A  L  V  S  E  E  L  S  Y  K  L  K   : E  L  P  K  V  R  W  V  L  P  D  S  Y  L  D  V  R  N  K  D  Y  G   : G  E  P  F  I  N  G  Q  A  V  P  Y  D  P  K  Y  H  E  E  W  V  R  N  N  A  R  A  N  E  R  N  R  R  N  D  R  P  R  N  F  D  R  S  R  N  F  E  R  R  R  E  M  Q  N  Q  P  S  Q  N  P  G  S  N  M  A  A  G  G  P  P  N  M  G  G  M  Q  Q  P  N  M  G  G  M  H  Q  Q  Q  G  M  G  G  P  P  P  H  A  G  G  M  H  Q  Q  Q  G  Y  G  G  P  P  P  H  A  G  G  M  Q  Q  P  D  M  R  G  P  P  M  Q  Q  Q  G  Y  G  G  P  P  P  H  A  G  G  M  Q  Q  P  D  M  R  G  P  P  M  Q  Q  Q  G  Y  G  G  P  P  P  H  A  G  G  M  Q  Q  P  D  M  R  G  P  P  R  G  G  G  M  Q  Q  P  N  M  P  P  N  M  G  G  V  P  P  N  N  Y  G  M  P  N  N  A  R  N  F  Q  Y  N  G  G  G  Q  N  N  G  D  T  P  Y  Q  T  G  P  G  P  N  Q  S  Y  A  P  N  T  S  D  G  N  S  Y  Q  N  P  N  M  A  G  R  D  M  S  N  S  N  Y  R  *  A  A  V  D  T  C  L  V  V  N  A  R  W  F  I  F  T  K  *  C  L  N  G  V  L  I  A  R  C  P  H  N  S  W  K  Y  E  F  Y  I  L  S  Y  A  V  P  K  I  I  G  :  F  F  M  L  I  N  N  E  K  L  L  N  V  T  </first_frame>
            <second_frame>  L  A  R  V  L  L  K  R  K  W  R  L  A  L  C  S  M  H  S  N  A  P  A  T  H  F  L  S  L  Q  L  R  A  L  T  H  S  T  F  S  D  H  F  M  P  L  R  P  T  Y  E  M  S  L  R  H  R  R  R  F  L  E  V  L  P  L  V  K  R  R  R  H  *  M  I  Q  I  L  T  G  P  I  D  L  R  R  K  R  F  C  L  T  A  V  I  L  S  T  G  L  L  *  W  R  S  L  K  V  I  L  P  E  M  K  L  L  I  A  T  S  K  H  L  L  R  L  L  E   : V  R  R  K  H  G  *  R  F  I  P  S  Q  L  D  I  T  L  L  L  V  P  L  Y  L  K  S  F  L  I  N  *  K  :  S  C  L  R  F  V  G  C  F  L  I  L  I  S  M  L  E  I  K  I  M  E  :  G  N  L  L  S  M  D  R  L  Y  H  M  T  R  N  T  M  R  N  G  *  E  T  M  L  V  L  M  R  E  T  G  A  M  T  D  L  V  I  L  I  G  P  E  T  L  R  E  E  E  R  C  R  I  N  P  V  R  T  L  D  L  T  W  Q  Q  G  G  L  P  T  W  A  A  C  S  N  L  T  W  V  E  C  T  S  S  K  A  W  E  G  H  H  L  M  Q  A  G  C  T  S  S  K  A  M  E  G  H  H  L  M  Q  A  V  C  S  S  R  T  *  E  D  H  P  C  S  S  K  A  M  E  G  H  H  L  M  L  A  G  C  S  S  R  T  *  E  G  H  P  C  S  S  K  A  M  E  G  H  H  L  M  Q  A  G  C  S  S  R  T  *  E  G  H  P  V  E  V  G  C  S  S  R  I  C  H  Q  T  W  V  E  C  L  P  I  T  T  E  C  Q  T  T  H  V  I  S  N  T  M  V  V  D  R  T  M  E  T  R  L  T  K  Q  V  Q  G  Q  T  R  A  T  L  L  I  H  L  M  G  T  P  I  R  I  Q  T  W  L  V  E  I  C  P  I  L  I  T  D  E  Q  L  *  I  R  V  *  L  S  M  L  D  G  L  S  S  Q  S  N  V  L  M  E  F  *  *  H  V  V  L  I  I  V  G  S  T  N  F  T  Y  *  V  M  Q  C  Q  K  L  L  G :   F  S  C  *  *  T  T  K  N  C  *  M  *  H </second_frame>
            <third_frame>   *  L  G  F  C  *  N  E  N  G  V  S  L  F  A  Q  C  I  Q  T  L  L  Q  L  I  F  S  L  Y  N  S  E  H  L  L  T  P  P  S  P  T  T  S  C  R  C  G  Q  P  T  K  C  L  S  G  T  D  A  V  F  S  R  F  C  H  S  S  N  V  V  V  T  E  *  S  K  S  *  L  V  Q  S  T  S  E  G  N  D  F  A  *  R  L  *  F  *  A  L  A  C  C  D  G  E  A  *  R  *  S  Y  Q  R  *  N  Y  *  *  L  H  Q  N  T  C  Y  D  C  W  K  :  *  G  G  S  T  D  E  D  L  F  R  L  N  *  T  L  L  C  F  W  C  P  C  I  *  R  A  F  L  *  T  K  R :   A  A  *  G  S  L  G  A  S  *  F  L  S  R  C  *  K  *  R  L  W  R :   G  T  F  Y  Q  W  T  G  C  T  I  *  P  E  I  P  *  G  M  G  E  K  Q  C  S  C  *  *  E  K  Q  A  Q  *  P  T  S  *  F  *  *  V  Q  K  L  *  E  K  K  R  D  A  E  S  T  Q  S  E  P  W  I  *  H  G  S  R  G  A  S  Q  H  G  R  H  A  A  T  *  H  G  W  N  A  P  A  A  R  H  G  R  A  T  T  S  C  R  R  D  A  P  A  A  R  L  W  R  A  T  T  S  C  R  R  Y  A  A  A  G  H  E  R  T  T  H  A  A  A  R  L  W  R  A  T  T  S  C  W  R  D  A  A  A  G  H  E  R  A  T  H  A  A  A  R  L  W  R  A  T  T  S  C  R  R  D  A  A  A  G  H  E  R  A  T  P  W  R  W  D  A  A  A  E  Y  A  T  K  H  G  W  S  A  S  Q  *  L  R  N  A  K  Q  R  T  *  F  P  I  Q  W  W  W  T  E  Q  W  R  H  A  L  P  N  R  S  R  A  K  P  E  L  R  S  *  Y  I  *  W  E  L  L  S  E  S  K  H  G  W  *  R  Y  V  Q  F  *  L  P  M  S  S  C  R  Y  V  F  S  C  Q  C  *  M  V  Y  L  H  K  V  M  S  *  W  S  F  D  S  T  L  S  S  *  *  L  E  V  R  I  L  H  I  E  L  C  S  A  K  N  Y  W   : V  F  H  V  D  K  Q  R  K  T  A  E  C  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90736" stop="90360"/>
                    <exon start="89885" stop="89788"/>
                    <exon start="89681" stop="89616"/>
                    <exon start="89457" stop="88691"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1305</number_coding_nucleotides>
                  <number_encoded_amino_acids>435</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GFVETKMASRSLLNAFKRSCNSFSLSTTPSTYSLHLLRPLHAVAANLRNVSPAPTPFSRGFATRQTSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLATIVGSEEEARMKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGEPFINGQAVPYDPKYHEEWVRNNARANERNRRNDRPRNFDRSRNFERRREMQNQPSQNPGSNMAAGGPPNMGGMQQPNMGGMHQQQGMGGPPPHAGGMHQQQGYGGPPPHAGGMQQPDMRGPPMQQQGYGGPPPHAGGMQQPDMRGPPMQQQGYGGPPPHAGGMQQPDMRGPPRGGGMQQPNMPPNMGGVPPNNYGMPNNARNFQYNGGGQNNGDTPYQTGPGPNQSYAPNTSDGNSYQNPNMAGRDMSNSNYR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="90723" e_stop="90360"/>
            <exon e_start="89885" e_stop="89788"/>
            <exon e_start="89681" e_stop="89485"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.875" acc_prob="0.961" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.929" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90723" e_stop="90360" e_length="364"/>
          </exon>
          <intron i_serial="1" don_prob="0.875" acc_prob="0.961">
            <gDNA_intron_boundary i_start="90359" i_stop="89886" i_length="474"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="89885" e_stop="89788" e_length="98"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.929">
            <gDNA_intron_boundary i_start="89787" i_stop="89682" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="89681" e_stop="89485" e_length="197"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90723" stop="90360"/>
              <exon start="89885" stop="89829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90688" stop="90360"/>
              <exon start="89885" stop="89788"/>
              <exon start="89681" stop="89485"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544765" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CGAAAATGGCGTCTCGCTCTTTGCTCAATGCATTCAAACGCTCCTGCAACTCATTTTCTCTCTCTACAACTCCGAGCACTTACTCACTCCACCTTCTCCGACCACTTCATGCCGTTGCGGCCAACCTACGAAATGTCTCTCCGGCACCGACGCCGTTTTCTCGAGGTTTTGCCACTCGTCAAACGTCGTCGTCACTGAATGATCCAAATCCTAACTGGTCCAATCGACCTCCGAAGGAAACGATTTTGCTTGACGGCTGTGATTTTGAGCACTGGCTTGTTGTGATGGAGAAGCCTGAAGGTGATCCTACCAGAGATGAAATTATTGATAGCTACATCAAAACACTTGCTACGATTGTTGGAAG : TGAGGAGGAAGCACGGATGAAGATTTATTCCGTCTCAACTAGACATTACTTTGCTTTTGGTGCCCTTGTATCTGAAGAGCTTTCTTATAAACTAAAAG : AGCTGCCTAAGGTTCGTTGGGTGCTTCCTGATTCTTATCTCGATGTTAGAAATAAAGATTATGGAGGTAAGCGATTCCATGTTTTGTAGTCCTATCAGGTTGCTGTGTCAGCACTAGTTAAGCATTTTTGGACAGTTTATCTTGGATTATAAACTTGTCATGTGTGTCAAGTTAATATGTGGTGCATCAGCTAATCT</gDNA_template>
            <first_frame> R  K  W  R  L  A  L  C  S  M  H  S  N  A  P  A  T  H  F  L  S  L  Q  L  R  A  L  T  H  S  T  F  S  D  H  F  M  P  L  R  P  T  Y  E  M  S  L  R  H  R  R  R  F  L  E  V  L  P  L  V  K  R  R  R  H  *  M  I  Q  I  L  T  G  P  I  D  L  R  R  K  R  F  C  L  T  A  V  I  L  S  T  G  L  L  *  W  R  S  L  K  V  I  L  P  E  M  K  L  L  I  A  T  S  K  H  L  L  R  L  L  E   : V  R  R  K  H  G  *  R  F  I  P  S  Q  L  D  I  T  L  L  L  V  P  L  Y  L  K  S  F  L  I  N  *  K  :  S  C  L  R  F  V  G  C  F  L  I  L  I  S  M  L  E  I  K  I  M  E  V  S  D  S  M  F  C  S  P  I  R  L  L  C  Q  H  *  L  S  I  F  G  Q  F  I  L  D  Y  K  L  V  M  C  V  K  L  I  C  G  A  S  A  N   </first_frame>
            <second_frame>  E  N  G  V  S  L  F  A  Q  C  I  Q  T  L  L  Q  L  I  F  S  L  Y  N  S  E  H  L  L  T  P  P  S  P  T  T  S  C  R  C  G  Q  P  T  K  C  L  S  G  T  D  A  V  F  S  R  F  C  H  S  S  N  V  V  V  T  E  *  S  K  S  *  L  V  Q  S  T  S  E  G  N  D  F  A  *  R  L  *  F  *  A  L  A  C  C  D  G  E  A  *  R  *  S  Y  Q  R  *  N  Y  *  *  L  H  Q  N  T  C  Y  D  C  W  K  :  *  G  G  S  T  D  E  D  L  F  R  L  N  *  T  L  L  C  F  W  C  P  C  I  *  R  A  F  L  *  T  K  R :   A  A  *  G  S  L  G  A  S  *  F  L  S  R  C  *  K  *  R  L  W  R  *  A  I  P  C  F  V  V  L  S  G  C  C  V  S  T  S  *  A  F  L  D  S  L  S  W  I  I  N  L  S  C  V  S  S  *  Y  V  V  H  Q  L  I  </second_frame>
            <third_frame>   K  M  A  S  R  S  L  L  N  A  F  K  R  S  C  N  S  F  S  L  S  T  T  P  S  T  Y  S  L  H  L  L  R  P  L  H  A  V  A  A  N  L  R  N  V  S  P  A  P  T  P  F  S  R  G  F  A  T  R  Q  T  S  S  S  L  N  D  P  N  P  N  W  S  N  R  P  P  K  E  T  I  L  L  D  G  C  D  F  E  H  W  L  V  V  M  E  K  P  E  G  D  P  T  R  D  E  I  I  D  S  Y  I  K  T  L  A  T  I  V  G  S :   E  E  E  A  R  M  K  I  Y  S  V  S  T  R  H  Y  F  A  F  G  A  L  V  S  E  E  L  S  Y  K  L  K   : E  L  P  K  V  R  W  V  L  P  D  S  Y  L  D  V  R  N  K  D  Y  G  G  K  R  F  H  V  L  *  S  Y  Q  V  A  V  S  A  L  V  K  H  F  W  T  V  Y  L  G  L  *  T  C  H  V  C  Q  V  N  M  W  C  I  S  *  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90721" stop="90360"/>
                    <exon start="89885" stop="89788"/>
                    <exon start="89681" stop="89593"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>546</number_coding_nucleotides>
                  <number_encoded_amino_acids>182</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMASRSLLNAFKRSCNSFSLSTTPSTYSLHLLRPLHAVAANLRNVSPAPTPFSRGFATRQTSSSLNDPNPNWSNRPPKETILLDGCDFEHWLVVMEKPEGDPTRDEIIDSYIKTLATIVGSEEEARMKIYSVSTRHYFAFGALVSEELSYKLKELPKVRWVLPDSYLDVRNKDYGGKRFHVL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="100213" PGL_stop="91949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="100213" e_stop="100030"/>
            <exon e_start="99182" e_stop="98788"/>
            <exon e_start="98611" e_stop="98527"/>
            <exon e_start="98092" e_stop="97870"/>
            <exon e_start="97673" e_stop="97570"/>
            <exon e_start="97466" e_stop="97379"/>
            <exon e_start="97225" e_stop="97071"/>
            <exon e_start="96792" e_stop="95794"/>
            <exon e_start="95694" e_stop="95308"/>
            <exon e_start="95191" e_stop="94903"/>
            <exon e_start="94852" e_stop="94472"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.913" e_score="0.946"/>
          <exon-intron don_prob="0.923" acc_prob="0.911" e_score="0.967"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="0.976"/>
          <exon-intron don_prob="0.944" acc_prob="0.890" e_score="0.987"/>
          <exon-intron don_prob="0.970" acc_prob="0.995" e_score="0.990"/>
          <exon-intron don_prob="0.956" acc_prob="0.863" e_score="0.966"/>
          <exon-intron don_prob="0.994" acc_prob="0.760" e_score="0.994"/>
          <exon-intron don_prob="0.975" acc_prob="1.000" e_score="0.980"/>
          <exon-intron don_prob="0.959" acc_prob="0.983" e_score="0.974"/>
          <exon-intron don_prob="0.920" acc_prob="0.000" e_score="0.986"/>
          <exon-only e_score="0.914"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.946">
            <gDNA_exon_boundary e_start="100213" e_stop="100030" e_length="184"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.913">
            <gDNA_intron_boundary i_start="100029" i_stop="99183" i_length="847"/>
          </intron>
          <exon e_serial="2" e_score="0.967">
            <gDNA_exon_boundary e_start="99182" e_stop="98788" e_length="395"/>
          </exon>
          <intron i_serial="2" don_prob="0.923" acc_prob="0.911">
            <gDNA_intron_boundary i_start="98787" i_stop="98612" i_length="176"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="98611" e_stop="98527" e_length="85"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="98526" i_stop="98093" i_length="434"/>
          </intron>
          <exon e_serial="4" e_score="0.987">
            <gDNA_exon_boundary e_start="98092" e_stop="97870" e_length="223"/>
          </exon>
          <intron i_serial="4" don_prob="0.944" acc_prob="0.890">
            <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196"/>
          </intron>
          <exon e_serial="5" e_score="0.990">
            <gDNA_exon_boundary e_start="97673" e_stop="97570" e_length="104"/>
          </exon>
          <intron i_serial="5" don_prob="0.970" acc_prob="0.995">
            <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103"/>
          </intron>
          <exon e_serial="6" e_score="0.966">
            <gDNA_exon_boundary e_start="97466" e_stop="97379" e_length="88"/>
          </exon>
          <intron i_serial="6" don_prob="0.956" acc_prob="0.863">
            <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="97225" e_stop="97071" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.760">
            <gDNA_intron_boundary i_start="97070" i_stop="96793" i_length="278"/>
          </intron>
          <exon e_serial="8" e_score="0.980">
            <gDNA_exon_boundary e_start="96792" e_stop="95794" e_length="999"/>
          </exon>
          <intron i_serial="8" don_prob="0.975" acc_prob="1.000">
            <gDNA_intron_boundary i_start="95793" i_stop="95695" i_length="99"/>
          </intron>
          <exon e_serial="9" e_score="0.974">
            <gDNA_exon_boundary e_start="95694" e_stop="95308" e_length="387"/>
          </exon>
          <intron i_serial="9" don_prob="0.959" acc_prob="0.983">
            <gDNA_intron_boundary i_start="95307" i_stop="95192" i_length="116"/>
          </intron>
          <exon e_serial="10" e_score="0.986">
            <gDNA_exon_boundary e_start="95191" e_stop="94903" e_length="289"/>
          </exon>
          <intron i_serial="10" don_prob="0.920" acc_prob="0.000">
            <gDNA_intron_boundary i_start="94902" i_stop="94853" i_length="50"/>
          </intron>
          <exon e_serial="11" e_score="0.914">
            <gDNA_exon_boundary e_start="94852" e_stop="94472" e_length="381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100213" stop="100030"/>
              <exon start="99182" stop="98788"/>
              <exon start="98611" stop="98527"/>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97071"/>
              <exon start="96792" stop="95794"/>
              <exon start="95694" stop="95308"/>
              <exon start="95191" stop="94903"/>
              <exon start="94852" stop="94621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99082" stop="98788"/>
              <exon start="98611" stop="98527"/>
              <exon start="98092" stop="97934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569328" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98855" stop="98788"/>
              <exon start="98611" stop="98527"/>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98576" stop="98527"/>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562115" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98569" stop="98527"/>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97071"/>
              <exon start="96792" stop="96607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585567" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97890" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97071"/>
              <exon start="96792" stop="96656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97412" stop="97379"/>
              <exon start="97225" stop="97071"/>
              <exon start="96792" stop="96252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97110" stop="97071"/>
              <exon start="96792" stop="96269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96197" stop="95794"/>
              <exon start="95694" stop="95446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95613" stop="95308"/>
              <exon start="95191" stop="94903"/>
              <exon start="94852" stop="94788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E587989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94773" stop="94602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94773" stop="94602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94685" stop="94472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572727" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACTGTTGAGTGAGATATGGCTACTAAGAATTTGGAGAAACTTGCTTCAATTGATGCACAGTTGAGGCAACTGGTGCCTGCTAAAGTTTCTGAAGATGATAAACTTGTTGAGTATGATGCTTTGCTTTTGGATAGGTTTCTTGATATTCTTCAAGATTTGCATGGAGAGGATCTCAAAGGAACA : GTCCAAGATTGTTATGAGCTTTCTGCCGAGTATGAAGCCAAGCATGATCCGAAGAAGCTGGAGGAACTTGGCAATGTGTTGACAAGTTTGGATCCAGGGGATTCAATTGTTATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCAGATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAAGGAGATTTCGGGGATGAGAGTAATGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAACTGGTGGGGGACTTAAAGAAGTCCCCCCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATTTGGTCCTAACAGCTCATCCTACTCAATCTGTACGAAGATCATTGCTTCAAAAGCATGGCAG : GATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAG : ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATG : GTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAG : TTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCAGATAAACTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAG : AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAG : TTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTGGAAATTGGTTCATATCGAGAATGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACGGGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAGCGTGAATGCCGAGTTAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCCGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTGGTACAGAAACCGGATTAATGGCAAGCAAGAAGTGATGATTGGATACTCCGACTCTGGCAAGGATGCAGGTCGGCTCTCAGCAGCCTGGCAGTTATATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTCGACGTGAAGCTAACCATGTTCCATGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCACTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAACGTTATACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCTACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTCGAGTATTTCCGCCTG : GCCACACCTGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATCGAAAAGGATATCAAGAACCTCCGCATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGTGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAG : ATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTG : AACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTATCTAGTGACTCCTTTGTAATTTCAGTCTTGCATAGGCATTATGTTAATACATTAGTGTATTATACTATTCCGTTTCAATTTATTTGTCATATTTTGACTTGGAAAATAGTTTAGGAAAATAAATAAACTTTTGAATCTT</gDNA_template>
            <first_frame> D  C  *  V  R  Y  G  Y  *  E  F  G  E  T  C  F  N  *  C  T  V  E  A  T  G  A  C  *  S  F  *  R  *  *  T  C  *  V  *  C  F  A  F  G  *  V  S  *  Y  S  S  R  F  A  W  R  G  S  Q  R  N   : S  P  R  L  L  *  A  F  C  R  V  *  S  Q  A  *  S  E  E  A  G  G  T  W  Q  C  V  D  K  F  G  S  R  G  F  N  C  Y  C  *  S  F  L  S  H  A  *  L  G  Q  F  G  *  G  G  S  D  C  L  P  *  A  P  K  I  E  E  K  R  R  F  R  G  *  E  *  C  N  N  *  V  R  Y  *  R  N  F  Q  E  T  G  G  G  L  K  E  V  P  P  R  S  F  *  C  Y  Q  E  S  D  C  G  F  G  P  N  S  S  S  Y  S  I  C  T  K  I  I  A  S  K  A  W  Q  :  D  P  *  L  L  G  S  V  V  C  *  R  H  Y  T  R  *  *  T  R  T  *  R  S  F  T  E  G   : D  P  S  C  V  P  N  *  *  D  P  K  N  S  S  Y  S  T  R  *  N  E  S  W  N  E  L  F  P  *  N  N  L  E  G  C  A  K  V  S  A  S  C  *  Y  S  S  *  K  H  R  D  *  *  T  S  S  L  *  C  S  S  Y  S  I  L  L  L  D  G  R  *  S  *  W :   *  S  K  S  D  S  R  G  H  K  R  C  L  L  I  G  K  N  D  G  S  *  L  V  L  F  A  N  R  G  P  H  V  *   : V  I  Y  V  A  L  Q  *  R  A  S  C  A  S  R  *  T  P  K  V  F  K  E  R  *  K  T  L  H  R :   I  L  E  A  S  S  S  K  *  T  L  S  C  N  S  W  *  C  E  R  *  V  V  S  D  T  R  A  C  S  P  T  V  R  P  W  I  L  *  N  S  R  G  S  N  L  Y  *  Y  *  A   : V  L  G  A  S  *  A  L  L  Q  I  S  L  C  L  W  *  S  L  H  S  G  W  *  P  S  G  F  P  *  T  S  F  Y  V  W  T  F  T  S  E  T  *  H  K  T  R  V  G  P  P  Y  *  C  A  *  C  Y  Y  A  A  F  G  N  W  F  I  S  R  M  V  *  R  T  *  T  R  V  A  S  V  *  T  Q  W  Q  E  T  F  I  W  T  G  S  S  K  N  *  R  N  C  *  C  F  G  Y  V  P  C  H  S  R  T  P  S  R  L  L  W  G  I  H  H  L  N  G  H  C  T  I  *  C  A  C  S  *  A  S  T  A  *  M  P  S  *  A  T  F  T  S  C  S  T  F  *  E  V  G  R  S  G  C  C  S  C  S  R  C  T  S  F  L  N  *  V  V  Q  K  P  D  *  W  Q  A  R  S  D  D  W  I  L  R  L  W  Q  G  C  R  S  A  L  S  S  L  A  V  I  *  G  S  R  G  A  Y  T  S  R  Q  G  V  R  R  E  A  N  H  V  P  W  *  R  W  Y  S  G  K  R  R  W  P  R  P  S  C  H  I  V  S  T  T  R  N  N  S  R  I  S  P  C  Y  S  S  G  *  G  Y  *  A  L  F  W  G  R  T  L  V  F  *  D  T  P  T  L  Y  C  C  Y  T  *  T  W  D  A  S  T  S  L  S  K  T  R  M  A  C  T  Y  G  R  N  C  S  C  C  Y  R  K  V  S  I  N  S  F  *  G  T  P  I  C  R  V  F  P  P   : G  H  T  *  V  R  V  W  S  N  E  H  W  Q  P  S  I  K  A  *  T  Q  R  R  H  R  I  T  *  S  Y  S  L  D  L  C  L  D  S  N  *  I  P  S  S  S  L  A  R  L  W  S  S  I  *  V  C  H  R  K  G  Y  Q  E  P  P  H  A  A  G  N  V  Q  C  M  A  I  L  *  G  N  Y  *  F  G  *  D  G  V  R  Q  R  R  P  R  H  C  C  I  V  R  Q  A  S  G  I  *  R  F  V  V  F  R  *  T  F  E  V  K  L  *  G  D  K  E  P  P  P  A   : D  C  W  T  Q  G  S  S  G  G  *  S  V  L  K  T  T  T  Q  A  A  *  L  L  H  H  N  I  E  R  V  S  S  L  H  P  K  A  Y  S  *  P  R  L  Q  C  H  T  K  A  S  H  F  Q  G  I  H  G  S  K  T  S  Y  R  T  C  E  P  E  P  D  *  R  I  C  T  W  L  G  G  H  T  H  L  D  H  E  R  Y  C  C  W  N  A  E  Y  * :   T  R  H  L  E  Y  G  R  M  L  V  V  K  D  V  D  D  *  H  H  D  Y  A  L  D  A  K  S  R  I  G  D  H  H  *  A  N  L  H  K  Q  *  T  R  I  L  C  P  Y  C  N  C  S  N  S  *  T  L  R  I  R  L  V  *  C  V  I  R  *  N  I  Y  G  I  K  F  G  I  C  F  I  *  *  L  L  C  N  F  S  L  A  *  A  L  C  *  Y  I  S  V  L  Y  Y  S  V  S  I  Y  L  S  Y  F  D  L  E  N  S  L  G  K  *  I  N  F  *  I   </first_frame>
            <second_frame>  T  V  E  *  D  M  A  T  K  N  L  E  K  L  A  S  I  D  A  Q  L  R  Q  L  V  P  A  K  V  S  E  D  D  K  L  V  E  Y  D  A  L  L  L  D  R  F  L  D  I  L  Q  D  L  H  G  E  D  L  K  G  T  :  V  Q  D  C  Y  E  L  S  A  E  Y  E  A  K  H  D  P  K  K  L  E  E  L  G  N  V  L  T  S  L  D  P  G  D  S  I  V  I  A  K  A  F  S  H  M  L  N  L  A  N  L  A  E  E  V  Q  I  A  Y  R  R  R  Q  K  L  K  K  K  G  D  F  G  D  E  S  N  A  T  T  E  S  D  I  E  E  T  F  K  K  L  V  G  D  L  K  K  S  P  Q  E  V  F  D  A  I  K  N  Q  T  V  D  L  V  L  T  A  H  P  T  Q  S  V  R  R  S  L  L  Q  K  H  G  R :   I  R  D  C  L  A  Q  L  Y  A  K  D  I  T  P  D  D  K  Q  E  L  D  E  A  L  Q  R  E  :  I  Q  A  A  F  R  T  D  E  I  R  R  T  P  P  T  P  Q  D  E  M  R  A  G  M  S  Y  F  H  E  T  I  W  K  G  V  P  K  F  L  R  R  V  D  T  A  L  K  N  I  G  I  D  E  R  V  P  Y  N  A  P  L  I  Q  F  S  S  W  M  G  G  D  R  D   : G  N  P  R  V  T  P  E  V  T  R  D  V  C  L  L  A  R  M  M  A  A  N  L  Y  Y  S  Q  I  E  D  L  M  F  E  :  L  S  M  W  R  C  S  E  E  L  R  V  R  A  D  K  L  Q  R  S  S  R  R  D  E  K  H  Y  I   : E  F  W  K  Q  V  P  P  N  E  P  Y  R  V  I  L  G  D  V  R  D  K  L  Y  Q  T  R  E  R  A  R  Q  L  L  G  H  G  Y  S  E  I  P  E  E  A  T  Y  T  N  I  E  Q  :  F  L  E  P  L  E  L  C  Y  R  S  L  C  A  C  G  D  L  S  I  A  D  G  S  L  L  D  F  L  R  Q  V  S  T  F  G  L  S  L  V  R  L  D  I  R  Q  E  S  D  R  H  T  D  V  L  D  A  I  T  Q  H  L  E  I  G  S  Y  R  E  W  S  E  E  R  R  Q  E  W  L  L  S  E  L  S  G  K  R  P  L  F  G  R  D  L  P  K  T  E  E  I  A  D  V  L  D  T  F  H  V  I  A  E  L  P  A  D  C  F  G  A  Y  I  I  S  M  A  T  A  P  S  D  V  L  A  V  E  L  L  Q  R  E  C  R  V  R  Q  P  L  R  V  V  P  L  F  E  K  L  A  D  L  D  A  A  P  A  A  V  A  R  L  F  S  I  E  W  Y  R  N  R  I  N  G  K  Q  E  V  M  I  G  Y  S  D  S  G  K  D  A  G  R  L  S  A  A  W  Q  L  Y  K  A  Q  E  E  L  I  Q  V  A  K  E  F  D  V  K  L  T  M  F  H  G  R  G  G  T  V  G  R  G  G  G  P  A  H  L  A  I  L  S  Q  P  P  E  T  I  H  G  S  L  R  V  T  V  Q  G  E  V  I  E  H  S  F  G  E  E  H  L  C  F  R  T  L  Q  R  Y  T  A  A  T  L  E  H  G  M  H  P  P  V  S  P  K  P  E  W  R  A  L  M  D  E  I  A  V  V  A  T  E  K  Y  R  S  I  V  F  K  E  P  R  F  V  E  Y  F  R  L  :  A  T  P  E  L  E  Y  G  R  M  N  I  G  S  R  P  S  K  R  K  P  S  G  G  I  E  S  L  R  A  I  P  W  I  F  A  W  T  Q  T  R  F  H  L  P  V  W  L  G  F  G  A  A  F  K  Y  A  I  E  K  D  I  K  N  L  R  M  L  Q  E  M  Y  N  A  W  P  F  F  R  V  T  I  D  L  V  E  M  V  F  A  K  G  D  P  G  I  A  A  L  F  D  K  L  L  V  S  E  D  L  L  S  F  G  E  L  L  R  S  N  Y  E  E  T  K  S  L  L  L  Q  :  I  A  G  H  K  D  L  L  E  G  D  P  Y  L  K  Q  R  L  R  L  R  D  S  Y  I  T  T  L  N  V  C  Q  A  Y  T  L  K  R  I  R  D  P  D  Y  S  V  T  P  R  P  H  I  S  K  E  Y  M  E  A  K  P  A  T  E  L  V  N  L  N  P  T  S  E  Y  A  P  G  L  E  D  T  L  I  L  T  M  K  G  I  A  A  G  M  Q  N  T   : E  R  V  T  W  N  M  E  G  C  *  S  S  K  M  L  T  T  N  I  M  I  M  L  L  T  R  S  P  E  *  G  T  I  T  E  Q  T  C  T  N  S  E  L  E  S  Y  V  P  I  A  I  V  A  T  L  E  H  *  G  S  V  W  F  D  V  L  L  D  E  I  F  M  V  *  N  L  V  F  A  L  S  S  D  S  F  V  I  S  V  L  H  R  H  Y  V  N  T  L  V  Y  Y  T  I  P  F  Q  F  I  C  H  I  L  T  W  K  I  V  *  E  N  K  *  T  F  E  S  </second_frame>
            <third_frame>   L  L  S  E  I  W  L  L  R  I  W  R  N  L  L  Q  L  M  H  S  *  G  N  W  C  L  L  K  F  L  K  M  I  N  L  L  S  M  M  L  C  F  W  I  G  F  L  I  F  F  K  I  C  M  E  R  I  S  K  E  Q :   S  K  I  V  M  S  F  L  P  S  M  K  P  S  M  I  R  R  S  W  R  N  L  A  M  C  *  Q  V  W  I  Q  G  I  Q  L  L  L  L  K  L  S  L  T  C  L  T  W  P  I  W  L  R  R  F  R  L  P  T  V  G  A  K  N  *  R  K  K  E  I  S  G  M  R  V  M  Q  Q  L  S  Q  I  L  K  K  L  S  R  N  W  W  G  T  *  R  S  P  P  K  K  F  L  M  L  S  R  I  R  L  W  I  W  S  *  Q  L  I  L  L  N  L  Y  E  D  H  C  F  K  S  M  A   : G  S  V  T  A  W  L  S  C  M  L  K  T  L  H  P  M  I  N  K  N  L  T  K  L  Y  R  G  R :   S  K  L  R  S  E  L  M  R  S  E  E  L  L  L  L  H  K  M  K  *  E  L  E  *  A  I  S  M  K  Q  F  G  R  V  C  Q  S  F  C  V  V  L  I  Q  L  L  K  T  *  G  L  M  N  E  F  L  I  M  L  L  L  F  N  S  P  L  G  W  A  V  I  V  M  :  V  I  Q  E  *  L  P  R  S  Q  E  M  F  A  Y  W  Q  E  *  W  Q  L  T  C  T  I  R  K  *  R  T  S  C  L  S :   Y  L  C  G  A  A  V  K  S  F  V  C  E  Q  I  N  S  K  G  L  Q  G  E  M  K  N  T  T  *  :  N  F  G  S  K  F  L  Q  M  N  P  I  V  *  F  L  V  M  *  E  I  S  C  I  R  H  A  S  V  L  A  N  C  *  A  M  D  T  L  K  F  Q  R  K  Q  L  I  L  I  L  S  S :   S  W  S  L  L  S  S  A  T  D  L  F  V  L  V  V  I  S  P  *  R  M  V  A  F  W  I  S  L  D  K  F  L  R  L  D  F  H  *  *  D  L  T  *  D  K  S  R  T  A  I  L  M  C  L  M  L  L  R  S  I  W  K  L  V  H  I  E  N  G  L  K  N  V  D  K  S  G  F  C  L  N  S  V  A  R  D  L  Y  L  D  G  I  F  Q  K  L  K  K  L  L  M  F  W  I  R  S  M  S  *  P  N  S  Q  Q  T  A  L  G  H  T  S  S  Q  W  P  L  H  H  L  M  C  L  Q  L  S  F  Y  S  V  N  A  E  L  G  N  L  Y  E  L  F  H  F  L  R  S  W  P  I  W  M  L  L  L  Q  P  L  H  V  F  S  Q  L  S  G  T  E  T  G  L  M  A  S  K  K  *  *  L  D  T  P  T  L  A  R  M  Q  V  G  S  Q  Q  P  G  S  Y  I  R  L  K  R  S  L  Y  K  S  P  R  S  S  T  *  S  *  P  C  S  M  V  E  V  V  Q  W  E  E  E  V  A  P  P  I  L  P  Y  C  L  N  H  P  K  Q  F  T  D  L  S  V  L  Q  F  R  V  R  L  L  S  T  L  L  G  K  N  T  C  V  L  G  H  S  N  V  I  L  L  L  H  L  N  M  G  C  I  H  Q  S  L  Q  N  Q  N  G  V  H  L  W  T  K  L  Q  L  L  L  Q  K  S  I  D  Q  *  F  L  R  N  P  D  L  S  S  I  S  A  W :   P  H  L  S  *  S  M  V  E  *  T  L  A  A  V  H  Q  S  V  N  P  A  E  A  *  N  H  L  E  L  F  L  G  S  L  L  G  L  K  L  D  S  I  F  Q  S  G  S  A  L  E  Q  H  L  S  M  P  S  K  R  I  S  R  T  S  A  C  C  R  K  C  T  M  H  G  H  S  L  G  *  L  L  I  W  L  R  W  C  S  P  K  E  T  Q  A  L  L  H  C  S  T  S  F  W  Y  L  K  I  C  C  L  S  V  N  F  *  G  Q  T  M  R  R  Q  R  A  S  S  C  R :   L  L  D  T  R  I  F  W  R  V  I  R  T  *  N  N  D  S  G  C  V  T  P  T  S  Q  H  *  T  C  V  K  P  T  P  *  S  V  F  V  T  Q  T  T  V  S  H  Q  G  L  T  F  P  R  N  T  W  K  Q  N  Q  L  Q  N  L  *  T  *  T  R  L  A  N  M  H  L  A  W  R  T  H  S  S  *  P  *  K  V  L  L  L  E  C  R  I  L  :  N  A  S  P  G  I  W  K  D  V  S  R  Q  R  C  *  R  L  T  S  *  L  C  S  *  R  E  V  P  N  R  G  P  S  L  S  K  L  A  Q  T  V  N  *  N  L  M  S  L  L  Q  L  *  Q  L  L  N  T  K  D  P  F  G  L  M  C  Y  *  M  K  Y  L  W  Y  K  I  W  Y  L  L  Y  L  V  T  P  L  *  F  Q  S  C  I  G  I  M  L  I  H  *  C  I  I  L  F  R  F  N  L  F  V  I  F  *  L  G  K  *  F  R  K  I  N  K  L  L  N  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100200" stop="100030"/>
                    <exon start="99182" stop="98788"/>
                    <exon start="98611" stop="98527"/>
                    <exon start="98092" stop="97870"/>
                    <exon start="97673" stop="97570"/>
                    <exon start="97466" stop="97379"/>
                    <exon start="97225" stop="97071"/>
                    <exon start="96792" stop="95794"/>
                    <exon start="95694" stop="95308"/>
                    <exon start="95191" stop="94903"/>
                    <exon start="94852" stop="94821"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2925</number_coding_nucleotides>
                  <number_encoded_amino_acids>975</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DMATKNLEKLASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKGTVQDCYELSAEYEAKHDPKKLEELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRQKLKKKGDFGDESNATTESDIEETFKKLVGDLKKSPQEVFDAIKNQTVDLVLTAHPTQSVRRSLLQKHGRIRDCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGIDERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCSEELRVRADKLQRSSRRDEKHYIEFWKQVPPNEPYRVILGDVRDKLYQTRERARQLLGHGYSEIPEEATYTNIEQFLEPLELCYRSLCACGDLSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITQHLEIGSYREWSEERRQEWLLSELSGKRPLFGRDLPKTEEIADVLDTFHVIAELPADCFGAYIISMATAPSDVLAVELLQRECRVRQPLRVVPLFEKLADLDAAPAAVARLFSIEWYRNRINGKQEVMIGYSDSGKDAGRLSAAWQLYKAQEELIQVAKEFDVKLTMFHGRGGTVGRGGGPAHLAILSQPPETIHGSLRVTVQGEVIEHSFGEEHLCFRTLQRYTAATLEHGMHPPVSPKPEWRALMDEIAVVATEKYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKYAIEKDIKNLRMLQEMYNAWPFFRVTIDLVEMVFAKGDPGIAALFDKLLVSEDLLSFGELLRSNYEETKSLLLQIAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPDYSVTPRPHISKEYMEAKPATELVNLNPTSEYAPGLEDTLILTMKGIAAGMQNTERVTWNMEGC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="100213" e_stop="100030"/>
            <exon e_start="99182" e_stop="98788"/>
            <exon e_start="98611" e_stop="98527"/>
            <exon e_start="98092" e_stop="97870"/>
            <exon e_start="97673" e_stop="97570"/>
            <exon e_start="97466" e_stop="97379"/>
            <exon e_start="97225" e_stop="97071"/>
            <exon e_start="96792" e_stop="95794"/>
            <exon e_start="95694" e_stop="95308"/>
            <exon e_start="95191" e_stop="94472"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.913" e_score="0.967"/>
          <exon-intron don_prob="0.923" acc_prob="0.911" e_score="0.985"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.944" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.863" e_score="0.966"/>
          <exon-intron don_prob="0.994" acc_prob="0.760" e_score="0.994"/>
          <exon-intron don_prob="0.975" acc_prob="1.000" e_score="0.994"/>
          <exon-intron don_prob="0.959" acc_prob="0.983" e_score="0.982"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="100213" e_stop="100030" e_length="184"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.913">
            <gDNA_intron_boundary i_start="100029" i_stop="99183" i_length="847"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="99182" e_stop="98788" e_length="395"/>
          </exon>
          <intron i_serial="2" don_prob="0.923" acc_prob="0.911">
            <gDNA_intron_boundary i_start="98787" i_stop="98612" i_length="176"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="98611" e_stop="98527" e_length="85"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="98526" i_stop="98093" i_length="434"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98092" e_stop="97870" e_length="223"/>
          </exon>
          <intron i_serial="4" don_prob="0.944" acc_prob="0.890">
            <gDNA_intron_boundary i_start="97869" i_stop="97674" i_length="196"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="97673" e_stop="97570" e_length="104"/>
          </exon>
          <intron i_serial="5" don_prob="0.970" acc_prob="0.995">
            <gDNA_intron_boundary i_start="97569" i_stop="97467" i_length="103"/>
          </intron>
          <exon e_serial="6" e_score="0.966">
            <gDNA_exon_boundary e_start="97466" e_stop="97379" e_length="88"/>
          </exon>
          <intron i_serial="6" don_prob="0.956" acc_prob="0.863">
            <gDNA_intron_boundary i_start="97378" i_stop="97226" i_length="153"/>
          </intron>
          <exon e_serial="7" e_score="0.994">
            <gDNA_exon_boundary e_start="97225" e_stop="97071" e_length="155"/>
          </exon>
          <intron i_serial="7" don_prob="0.994" acc_prob="0.760">
            <gDNA_intron_boundary i_start="97070" i_stop="96793" i_length="278"/>
          </intron>
          <exon e_serial="8" e_score="0.994">
            <gDNA_exon_boundary e_start="96792" e_stop="95794" e_length="999"/>
          </exon>
          <intron i_serial="8" don_prob="0.975" acc_prob="1.000">
            <gDNA_intron_boundary i_start="95793" i_stop="95695" i_length="99"/>
          </intron>
          <exon e_serial="9" e_score="0.982">
            <gDNA_exon_boundary e_start="95694" e_stop="95308" e_length="387"/>
          </exon>
          <intron i_serial="9" don_prob="0.959" acc_prob="0.983">
            <gDNA_intron_boundary i_start="95307" i_stop="95192" i_length="116"/>
          </intron>
          <exon e_serial="10" e_score="0.981">
            <gDNA_exon_boundary e_start="95191" e_stop="94472" e_length="720"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="100213" stop="100030"/>
              <exon start="99182" stop="98788"/>
              <exon start="98611" stop="98527"/>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97071"/>
              <exon start="96792" stop="95794"/>
              <exon start="95694" stop="95308"/>
              <exon start="95191" stop="94613"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E744783" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99082" stop="98788"/>
              <exon start="98611" stop="98527"/>
              <exon start="98092" stop="97934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569328" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98855" stop="98788"/>
              <exon start="98611" stop="98527"/>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97169"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E557529" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98576" stop="98527"/>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97071"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562115" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98569" stop="98527"/>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E591085" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98092" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97071"/>
              <exon start="96792" stop="96607"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E585567" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97890" stop="97870"/>
              <exon start="97673" stop="97570"/>
              <exon start="97466" stop="97379"/>
              <exon start="97225" stop="97071"/>
              <exon start="96792" stop="96656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288272" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97412" stop="97379"/>
              <exon start="97225" stop="97071"/>
              <exon start="96792" stop="96252"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E603877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97110" stop="97071"/>
              <exon start="96792" stop="96269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246856" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96197" stop="95794"/>
              <exon start="95694" stop="95446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95575" stop="95308"/>
              <exon start="95191" stop="94839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94773" stop="94602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94773" stop="94602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94685" stop="94472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572727" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GACTGTTGAGTGAGATATGGCTACTAAGAATTTGGAGAAACTTGCTTCAATTGATGCACAGTTGAGGCAACTGGTGCCTGCTAAAGTTTCTGAAGATGATAAACTTGTTGAGTATGATGCTTTGCTTTTGGATAGGTTTCTTGATATTCTTCAAGATTTGCATGGAGAGGATCTCAAAGGAACA : GTCCAAGATTGTTATGAGCTTTCTGCCGAGTATGAAGCCAAGCATGATCCGAAGAAGCTGGAGGAACTTGGCAATGTGTTGACAAGTTTGGATCCAGGGGATTCAATTGTTATTGCTAAAGCTTTCTCTCACATGCTTAACTTGGCCAATTTGGCTGAGGAGGTTCAGATTGCCTACCGTAGGCGCCAAAAATTGAAGAAAAAAGGAGATTTCGGGGATGAGAGTAATGCAACAACTGAGTCAGATATTGAAGAAACTTTCAAGAAACTGGTGGGGGACTTAAAGAAGTCCCCCCAAGAAGTTTTTGATGCTATCAAGAATCAGACTGTGGATTTGGTCCTAACAGCTCATCCTACTCAATCTGTACGAAGATCATTGCTTCAAAAGCATGGCAG : GATCCGTGACTGCTTGGCTCAGTTGTATGCTAAAGACATTACACCCGATGATAAACAAGAACTTGACGAAGCTTTACAGAGGGAG : ATCCAAGCTGCGTTCCGAACTGATGAGATCCGAAGAACTCCTCCTACTCCACAAGATGAAATGAGAGCTGGAATGAGCTATTTCCATGAAACAATTTGGAAGGGTGTGCCAAAGTTTCTGCGTCGTGTTGATACAGCTCTTAAAAACATAGGGATTGATGAACGAGTTCCTTATAATGCTCCTCTTATTCAATTCTCCTCTTGGATGGGCGGTGATCGTGATG : GTAATCCAAGAGTGACTCCCGAGGTCACAAGAGATGTTTGCTTATTGGCAAGAATGATGGCAGCTAACTTGTACTATTCGCAAATAGAGGACCTCATGTTTGAG : TTATCTATGTGGCGCTGCAGTGAAGAGCTTCGTGTGCGAGCAGATAAACTCCAAAGGTCTTCAAGGAGAGATGAAAAACACTACATAG : AATTTTGGAAGCAAGTTCCTCCAAATGAACCCTATCGTGTAATTCTTGGTGATGTGAGAGATAAGTTGTATCAGACACGCGAGCGTGCTCGCCAACTGTTAGGCCATGGATACTCTGAAATTCCAGAGGAAGCAACTTATACTAATATTGAGCAG : TTCTTGGAGCCTCTTGAGCTCTGCTACAGATCTCTTTGTGCTTGTGGTGATCTCTCCATAGCGGATGGTAGCCTTCTGGATTTCCTTAGACAAGTTTCTACGTTTGGACTTTCACTAGTGAGACTTGACATAAGACAAGAGTCGGACCGCCATACTGATGTGCTTGATGCTATTACGCAGCATTTGGAAATTGGTTCATATCGAGAATGGTCTGAAGAACGTAGACAAGAGTGGCTTCTGTCTGAACTCAGTGGCAAGAGACCTTTATTTGGACGGGATCTTCCAAAAACTGAAGAAATTGCTGATGTTTTGGATACGTTCCATGTCATAGCCGAACTCCCAGCAGACTGCTTTGGGGCATACATCATCTCAATGGCCACTGCACCATCTGATGTGCTTGCAGTTGAGCTTCTACAGCGTGAATGCCGAGTTAGGCAACCTTTACGAGTTGTTCCACTTTTTGAGAAGTTGGCCGATCTGGATGCTGCTCCTGCAGCCGTTGCACGTCTTTTCTCAATTGAGTGGTACAGAAACCGGATTAATGGCAAGCAAGAAGTGATGATTGGATACTCCGACTCTGGCAAGGATGCAGGTCGGCTCTCAGCAGCCTGGCAGTTATATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTCGACGTGAAGCTAACCATGTTCCATGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCACTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAACGTTATACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCTACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTCGAGTATTTCCGCCTG : GCCACACCTGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATCGAAAAGGATATCAAGAACCTCCGCATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGTGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAG : ATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAAAACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAAATTTGGTATTTGCTTTATCTAGTGACTCCTTTGTAATTTCAGTCTTGCATAGGCATTATGTTAATACATTAGTGTATTATACTATTCCGTTTCAATTTATTTGTCATATTTTGACTTGGAAAATAGTTTAGGAAAATAAATAAACTTTTGAATCTT</gDNA_template>
            <first_frame> D  C  *  V  R  Y  G  Y  *  E  F  G  E  T  C  F  N  *  C  T  V  E  A  T  G  A  C  *  S  F  *  R  *  *  T  C  *  V  *  C  F  A  F  G  *  V  S  *  Y  S  S  R  F  A  W  R  G  S  Q  R  N   : S  P  R  L  L  *  A  F  C  R  V  *  S  Q  A  *  S  E  E  A  G  G  T  W  Q  C  V  D  K  F  G  S  R  G  F  N  C  Y  C  *  S  F  L  S  H  A  *  L  G  Q  F  G  *  G  G  S  D  C  L  P  *  A  P  K  I  E  E  K  R  R  F  R  G  *  E  *  C  N  N  *  V  R  Y  *  R  N  F  Q  E  T  G  G  G  L  K  E  V  P  P  R  S  F  *  C  Y  Q  E  S  D  C  G  F  G  P  N  S  S  S  Y  S  I  C  T  K  I  I  A  S  K  A  W  Q  :  D  P  *  L  L  G  S  V  V  C  *  R  H  Y  T  R  *  *  T  R  T  *  R  S  F  T  E  G   : D  P  S  C  V  P  N  *  *  D  P  K  N  S  S  Y  S  T  R  *  N  E  S  W  N  E  L  F  P  *  N  N  L  E  G  C  A  K  V  S  A  S  C  *  Y  S  S  *  K  H  R  D  *  *  T  S  S  L  *  C  S  S  Y  S  I  L  L  L  D  G  R  *  S  *  W :   *  S  K  S  D  S  R  G  H  K  R  C  L  L  I  G  K  N  D  G  S  *  L  V  L  F  A  N  R  G  P  H  V  *   : V  I  Y  V  A  L  Q  *  R  A  S  C  A  S  R  *  T  P  K  V  F  K  E  R  *  K  T  L  H  R :   I  L  E  A  S  S  S  K  *  T  L  S  C  N  S  W  *  C  E  R  *  V  V  S  D  T  R  A  C  S  P  T  V  R  P  W  I  L  *  N  S  R  G  S  N  L  Y  *  Y  *  A   : V  L  G  A  S  *  A  L  L  Q  I  S  L  C  L  W  *  S  L  H  S  G  W  *  P  S  G  F  P  *  T  S  F  Y  V  W  T  F  T  S  E  T  *  H  K  T  R  V  G  P  P  Y  *  C  A  *  C  Y  Y  A  A  F  G  N  W  F  I  S  R  M  V  *  R  T  *  T  R  V  A  S  V  *  T  Q  W  Q  E  T  F  I  W  T  G  S  S  K  N  *  R  N  C  *  C  F  G  Y  V  P  C  H  S  R  T  P  S  R  L  L  W  G  I  H  H  L  N  G  H  C  T  I  *  C  A  C  S  *  A  S  T  A  *  M  P  S  *  A  T  F  T  S  C  S  T  F  *  E  V  G  R  S  G  C  C  S  C  S  R  C  T  S  F  L  N  *  V  V  Q  K  P  D  *  W  Q  A  R  S  D  D  W  I  L  R  L  W  Q  G  C  R  S  A  L  S  S  L  A  V  I  *  G  S  R  G  A  Y  T  S  R  Q  G  V  R  R  E  A  N  H  V  P  W  *  R  W  Y  S  G  K  R  R  W  P  R  P  S  C  H  I  V  S  T  T  R  N  N  S  R  I  S  P  C  Y  S  S  G  *  G  Y  *  A  L  F  W  G  R  T  L  V  F  *  D  T  P  T  L  Y  C  C  Y  T  *  T  W  D  A  S  T  S  L  S  K  T  R  M  A  C  T  Y  G  R  N  C  S  C  C  Y  R  K  V  S  I  N  S  F  *  G  T  P  I  C  R  V  F  P  P   : G  H  T  *  V  R  V  W  S  N  E  H  W  Q  P  S  I  K  A  *  T  Q  R  R  H  R  I  T  *  S  Y  S  L  D  L  C  L  D  S  N  *  I  P  S  S  S  L  A  R  L  W  S  S  I  *  V  C  H  R  K  G  Y  Q  E  P  P  H  A  A  G  N  V  Q  C  M  A  I  L  *  G  N  Y  *  F  G  *  D  G  V  R  Q  R  R  P  R  H  C  C  I  V  R  Q  A  S  G  I  *  R  F  V  V  F  R  *  T  F  E  V  K  L  *  G  D  K  E  P  P  P  A   : D  C  W  T  Q  G  S  S  G  G  *  S  V  L  K  T  T  T  Q  A  A  *  L  L  H  H  N  I  E  R  V  S  S  L  H  P  K  A  Y  S  *  P  R  L  Q  C  H  T  K  A  S  H  F  Q  G  I  H  G  S  K  T  S  Y  R  T  C  E  P  E  P  D  *  R  I  C  T  W  L  G  G  H  T  H  L  D  H  E  R  Y  C  C  W  N  A  E  Y  W  L  S  *  S  Y  F  M  S  V  F  H  S  *  Y  L  R  K  R  V  T  W  N  M  E  G  C  *  S  S  K  M  L  T  T  N  I  M  I  M  L  L  T  R  S  P  E  *  G  T  I  T  E  Q  T  C  T  N  S  E  L  E  S  Y  V  P  I  A  I  V  A  T  L  E  H  *  G  S  V  W  F  D  V  L  L  D  E  I  F  M  V  *  N  L  V  F  A  L  S  S  D  S  F  V  I  S  V  L  H  R  H  Y  V  N  T  L  V  Y  Y  T  I  P  F  Q  F  I  C  H  I  L  T  W  K  I  V  *  E  N  K  *  T  F  E  S  </first_frame>
            <second_frame>  T  V  E  *  D  M  A  T  K  N  L  E  K  L  A  S  I  D  A  Q  L  R  Q  L  V  P  A  K  V  S  E  D  D  K  L  V  E  Y  D  A  L  L  L  D  R  F  L  D  I  L  Q  D  L  H  G  E  D  L  K  G  T  :  V  Q  D  C  Y  E  L  S  A  E  Y  E  A  K  H  D  P  K  K  L  E  E  L  G  N  V  L  T  S  L  D  P  G  D  S  I  V  I  A  K  A  F  S  H  M  L  N  L  A  N  L  A  E  E  V  Q  I  A  Y  R  R  R  Q  K  L  K  K  K  G  D  F  G  D  E  S  N  A  T  T  E  S  D  I  E  E  T  F  K  K  L  V  G  D  L  K  K  S  P  Q  E  V  F  D  A  I  K  N  Q  T  V  D  L  V  L  T  A  H  P  T  Q  S  V  R  R  S  L  L  Q  K  H  G  R :   I  R  D  C  L  A  Q  L  Y  A  K  D  I  T  P  D  D  K  Q  E  L  D  E  A  L  Q  R  E  :  I  Q  A  A  F  R  T  D  E  I  R  R  T  P  P  T  P  Q  D  E  M  R  A  G  M  S  Y  F  H  E  T  I  W  K  G  V  P  K  F  L  R  R  V  D  T  A  L  K  N  I  G  I  D  E  R  V  P  Y  N  A  P  L  I  Q  F  S  S  W  M  G  G  D  R  D   : G  N  P  R  V  T  P  E  V  T  R  D  V  C  L  L  A  R  M  M  A  A  N  L  Y  Y  S  Q  I  E  D  L  M  F  E  :  L  S  M  W  R  C  S  E  E  L  R  V  R  A  D  K  L  Q  R  S  S  R  R  D  E  K  H  Y  I   : E  F  W  K  Q  V  P  P  N  E  P  Y  R  V  I  L  G  D  V  R  D  K  L  Y  Q  T  R  E  R  A  R  Q  L  L  G  H  G  Y  S  E  I  P  E  E  A  T  Y  T  N  I  E  Q  :  F  L  E  P  L  E  L  C  Y  R  S  L  C  A  C  G  D  L  S  I  A  D  G  S  L  L  D  F  L  R  Q  V  S  T  F  G  L  S  L  V  R  L  D  I  R  Q  E  S  D  R  H  T  D  V  L  D  A  I  T  Q  H  L  E  I  G  S  Y  R  E  W  S  E  E  R  R  Q  E  W  L  L  S  E  L  S  G  K  R  P  L  F  G  R  D  L  P  K  T  E  E  I  A  D  V  L  D  T  F  H  V  I  A  E  L  P  A  D  C  F  G  A  Y  I  I  S  M  A  T  A  P  S  D  V  L  A  V  E  L  L  Q  R  E  C  R  V  R  Q  P  L  R  V  V  P  L  F  E  K  L  A  D  L  D  A  A  P  A  A  V  A  R  L  F  S  I  E  W  Y  R  N  R  I  N  G  K  Q  E  V  M  I  G  Y  S  D  S  G  K  D  A  G  R  L  S  A  A  W  Q  L  Y  K  A  Q  E  E  L  I  Q  V  A  K  E  F  D  V  K  L  T  M  F  H  G  R  G  G  T  V  G  R  G  G  G  P  A  H  L  A  I  L  S  Q  P  P  E  T  I  H  G  S  L  R  V  T  V  Q  G  E  V  I  E  H  S  F  G  E  E  H  L  C  F  R  T  L  Q  R  Y  T  A  A  T  L  E  H  G  M  H  P  P  V  S  P  K  P  E  W  R  A  L  M  D  E  I  A  V  V  A  T  E  K  Y  R  S  I  V  F  K  E  P  R  F  V  E  Y  F  R  L  :  A  T  P  E  L  E  Y  G  R  M  N  I  G  S  R  P  S  K  R  K  P  S  G  G  I  E  S  L  R  A  I  P  W  I  F  A  W  T  Q  T  R  F  H  L  P  V  W  L  G  F  G  A  A  F  K  Y  A  I  E  K  D  I  K  N  L  R  M  L  Q  E  M  Y  N  A  W  P  F  F  R  V  T  I  D  L  V  E  M  V  F  A  K  G  D  P  G  I  A  A  L  F  D  K  L  L  V  S  E  D  L  L  S  F  G  E  L  L  R  S  N  Y  E  E  T  K  S  L  L  L  Q  :  I  A  G  H  K  D  L  L  E  G  D  P  Y  L  K  Q  R  L  R  L  R  D  S  Y  I  T  T  L  N  V  C  Q  A  Y  T  L  K  R  I  R  D  P  D  Y  S  V  T  P  R  P  H  I  S  K  E  Y  M  E  A  K  P  A  T  E  L  V  N  L  N  P  T  S  E  Y  A  P  G  L  E  D  T  L  I  L  T  M  K  G  I  A  A  G  M  Q  N  T  G  *  A  N  P  I  S  C  L  S  F  I  V  D  T  *  E  N  A  S  P  G  I  W  K  D  V  S  R  Q  R  C  *  R  L  T  S  *  L  C  S  *  R  E  V  P  N  R  G  P  S  L  S  K  L  A  Q  T  V  N  *  N  L  M  S  L  L  Q  L  *  Q  L  L  N  T  K  D  P  F  G  L  M  C  Y  *  M  K  Y  L  W  Y  K  I  W  Y  L  L  Y  L  V  T  P  L  *  F  Q  S  C  I  G  I  M  L  I  H  *  C  I  I  L  F  R  F  N  L  F  V  I  F  *  L  G  K  *  F  R  K  I  N  K  L  L  N  L </second_frame>
            <third_frame>   L  L  S  E  I  W  L  L  R  I  W  R  N  L  L  Q  L  M  H  S  *  G  N  W  C  L  L  K  F  L  K  M  I  N  L  L  S  M  M  L  C  F  W  I  G  F  L  I  F  F  K  I  C  M  E  R  I  S  K  E  Q :   S  K  I  V  M  S  F  L  P  S  M  K  P  S  M  I  R  R  S  W  R  N  L  A  M  C  *  Q  V  W  I  Q  G  I  Q  L  L  L  L  K  L  S  L  T  C  L  T  W  P  I  W  L  R  R  F  R  L  P  T  V  G  A  K  N  *  R  K  K  E  I  S  G  M  R  V  M  Q  Q  L  S  Q  I  L  K  K  L  S  R  N  W  W  G  T  *  R  S  P  P  K  K  F  L  M  L  S  R  I  R  L  W  I  W  S  *  Q  L  I  L  L  N  L  Y  E  D  H  C  F  K  S  M  A   : G  S  V  T  A  W  L  S  C  M  L  K  T  L  H  P  M  I  N  K  N  L  T  K  L  Y  R  G  R :   S  K  L  R  S  E  L  M  R  S  E  E  L  L  L  L  H  K  M  K  *  E  L  E  *  A  I  S  M  K  Q  F  G  R  V  C  Q  S  F  C  V  V  L  I  Q  L  L  K  T  *  G  L  M  N  E  F  L  I  M  L  L  L  F  N  S  P  L  G  W  A  V  I  V  M  :  V  I  Q  E  *  L  P  R  S  Q  E  M  F  A  Y  W  Q  E  *  W  Q  L  T  C  T  I  R  K  *  R  T  S  C  L  S :   Y  L  C  G  A  A  V  K  S  F  V  C  E  Q  I  N  S  K  G  L  Q  G  E  M  K  N  T  T  *  :  N  F  G  S  K  F  L  Q  M  N  P  I  V  *  F  L  V  M  *  E  I  S  C  I  R  H  A  S  V  L  A  N  C  *  A  M  D  T  L  K  F  Q  R  K  Q  L  I  L  I  L  S  S :   S  W  S  L  L  S  S  A  T  D  L  F  V  L  V  V  I  S  P  *  R  M  V  A  F  W  I  S  L  D  K  F  L  R  L  D  F  H  *  *  D  L  T  *  D  K  S  R  T  A  I  L  M  C  L  M  L  L  R  S  I  W  K  L  V  H  I  E  N  G  L  K  N  V  D  K  S  G  F  C  L  N  S  V  A  R  D  L  Y  L  D  G  I  F  Q  K  L  K  K  L  L  M  F  W  I  R  S  M  S  *  P  N  S  Q  Q  T  A  L  G  H  T  S  S  Q  W  P  L  H  H  L  M  C  L  Q  L  S  F  Y  S  V  N  A  E  L  G  N  L  Y  E  L  F  H  F  L  R  S  W  P  I  W  M  L  L  L  Q  P  L  H  V  F  S  Q  L  S  G  T  E  T  G  L  M  A  S  K  K  *  *  L  D  T  P  T  L  A  R  M  Q  V  G  S  Q  Q  P  G  S  Y  I  R  L  K  R  S  L  Y  K  S  P  R  S  S  T  *  S  *  P  C  S  M  V  E  V  V  Q  W  E  E  E  V  A  P  P  I  L  P  Y  C  L  N  H  P  K  Q  F  T  D  L  S  V  L  Q  F  R  V  R  L  L  S  T  L  L  G  K  N  T  C  V  L  G  H  S  N  V  I  L  L  L  H  L  N  M  G  C  I  H  Q  S  L  Q  N  Q  N  G  V  H  L  W  T  K  L  Q  L  L  L  Q  K  S  I  D  Q  *  F  L  R  N  P  D  L  S  S  I  S  A  W :   P  H  L  S  *  S  M  V  E  *  T  L  A  A  V  H  Q  S  V  N  P  A  E  A  *  N  H  L  E  L  F  L  G  S  L  L  G  L  K  L  D  S  I  F  Q  S  G  S  A  L  E  Q  H  L  S  M  P  S  K  R  I  S  R  T  S  A  C  C  R  K  C  T  M  H  G  H  S  L  G  *  L  L  I  W  L  R  W  C  S  P  K  E  T  Q  A  L  L  H  C  S  T  S  F  W  Y  L  K  I  C  C  L  S  V  N  F  *  G  Q  T  M  R  R  Q  R  A  S  S  C  R :   L  L  D  T  R  I  F  W  R  V  I  R  T  *  N  N  D  S  G  C  V  T  P  T  S  Q  H  *  T  C  V  K  P  T  P  *  S  V  F  V  T  Q  T  T  V  S  H  Q  G  L  T  F  P  R  N  T  W  K  Q  N  Q  L  Q  N  L  *  T  *  T  R  L  A  N  M  H  L  A  W  R  T  H  S  S  *  P  *  K  V  L  L  L  E  C  R  I  L  V  K  L  I  L  F  H  V  C  L  S  *  L  I  L  E  K  T  R  H  L  E  Y  G  R  M  L  V  V  K  D  V  D  D  *  H  H  D  Y  A  L  D  A  K  S  R  I  G  D  H  H  *  A  N  L  H  K  Q  *  T  R  I  L  C  P  Y  C  N  C  S  N  S  *  T  L  R  I  R  L  V  *  C  V  I  R  *  N  I  Y  G  I  K  F  G  I  C  F  I  *  *  L  L  C  N  F  S  L  A  *  A  L  C  *  Y  I  S  V  L  Y  Y  S  V  S  I  Y  L  S  Y  F  D  L  E  N  S  L  G  K  *  I  N  F  *  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="100200" stop="100030"/>
                    <exon start="99182" stop="98788"/>
                    <exon start="98611" stop="98527"/>
                    <exon start="98092" stop="97870"/>
                    <exon start="97673" stop="97570"/>
                    <exon start="97466" stop="97379"/>
                    <exon start="97225" stop="97071"/>
                    <exon start="96792" stop="95794"/>
                    <exon start="95694" stop="95308"/>
                    <exon start="95191" stop="94898"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2898</number_coding_nucleotides>
                  <number_encoded_amino_acids>966</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DMATKNLEKLASIDAQLRQLVPAKVSEDDKLVEYDALLLDRFLDILQDLHGEDLKGTVQDCYELSAEYEAKHDPKKLEELGNVLTSLDPGDSIVIAKAFSHMLNLANLAEEVQIAYRRRQKLKKKGDFGDESNATTESDIEETFKKLVGDLKKSPQEVFDAIKNQTVDLVLTAHPTQSVRRSLLQKHGRIRDCLAQLYAKDITPDDKQELDEALQREIQAAFRTDEIRRTPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDTALKNIGIDERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYSQIEDLMFELSMWRCSEELRVRADKLQRSSRRDEKHYIEFWKQVPPNEPYRVILGDVRDKLYQTRERARQLLGHGYSEIPEEATYTNIEQFLEPLELCYRSLCACGDLSIADGSLLDFLRQVSTFGLSLVRLDIRQESDRHTDVLDAITQHLEIGSYREWSEERRQEWLLSELSGKRPLFGRDLPKTEEIADVLDTFHVIAELPADCFGAYIISMATAPSDVLAVELLQRECRVRQPLRVVPLFEKLADLDAAPAAVARLFSIEWYRNRINGKQEVMIGYSDSGKDAGRLSAAWQLYKAQEELIQVAKEFDVKLTMFHGRGGTVGRGGGPAHLAILSQPPETIHGSLRVTVQGEVIEHSFGEEHLCFRTLQRYTAATLEHGMHPPVSPKPEWRALMDEIAVVATEKYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKYAIEKDIKNLRMLQEMYNAWPFFRVTIDLVEMVFAKGDPGIAALFDKLLVSEDLLSFGELLRSNYEETKSLLLQIAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPDYSVTPRPHISKEYMEAKPATELVNLNPTSEYAPGLEDTLILTMKGIAAGMQNTG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="96197" e_stop="95794"/>
            <exon e_start="95694" e_stop="95308"/>
            <exon e_start="95191" e_stop="94628"/>
            <exon e_start="93503" e_stop="93477"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="1.000" e_score="0.978"/>
          <exon-intron don_prob="0.959" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.993"/>
          <exon-only e_score="0.852"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="96197" e_stop="95794" e_length="404"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="1.000">
            <gDNA_intron_boundary i_start="95793" i_stop="95695" i_length="99"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="95694" e_stop="95308" e_length="387"/>
          </exon>
          <intron i_serial="2" don_prob="0.959" acc_prob="0.983">
            <gDNA_intron_boundary i_start="95307" i_stop="95192" i_length="116"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="95191" e_stop="94628" e_length="564"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="94627" i_stop="93504" i_length="1124"/>
          </intron>
          <exon e_serial="4" e_score="0.852">
            <gDNA_exon_boundary e_start="93503" e_stop="93477" e_length="27"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96197" stop="95794"/>
              <exon start="95694" stop="95446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574182" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95575" stop="95308"/>
              <exon start="95191" stop="94839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95038" stop="94628"/>
              <exon start="93503" stop="93477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220266" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94934" stop="94628"/>
              <exon start="93503" stop="93477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E220169" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGCTCTCAGCAGCCTGGCAGTTATATAAGGCTCAAGAGGAGCTTATACAAGTCGCCAAGGAGTTCGACGTGAAGCTAACCATGTTCCATGGTAGAGGTGGTACAGTGGGAAGAGGAGGTGGCCCCGCCCATCTTGCCATATTGTCTCAACCACCCGAAACAATTCACGGATCTCTCCGTGTTACAGTTCAGGGTGAGGTTATTGAGCACTCTTTTGGGGAAGAACACTTGTGTTTTAGGACACTCCAACGTTATACTGCTGCTACACTTGAACATGGGATGCATCCACCAGTCTCTCCAAAACCAGAATGGCGTGCACTTATGGACGAAATTGCAGTTGTTGCTACAGAAAAGTATCGATCAATAGTTTTTAAGGAACCCCGATTTGTCGAGTATTTCCGCCTG : GCCACACCTGAGTTAGAGTATGGTCGAATGAACATTGGCAGCCGTCCATCAAAGCGTAAACCCAGCGGAGGCATAGAATCACTTAGAGCTATTCCTTGGATCTTTGCTTGGACTCAAACTAGATTCCATCTTCCAGTCTGGCTCGGCTTTGGAGCAGCATTTAAGTATGCCATCGAAAAGGATATCAAGAACCTCCGCATGCTGCAGGAAATGTACAATGCATGGCCATTCTTTAGGGTAACTATTGATTTGGTTGAGATGGTGTTCGCCAAAGGAGACCCAGGCATTGCTGCATTGTTCGACAAGCTTCTGGTATCTGAAGATTTGTTGTCTTTCGGTGAACTTTTGAGGTCAAACTATGAGGAGACAAAGAGCCTCCTCCTGCAG : ATTGCTGGACACAAGGATCTTCTGGAGGGTGATCCGTACTTAAAACAACGACTCAGGCTGCGTGACTCCTACATCACAACATTGAACGTGTGTCAAGCCTACACCCTAAAGCGTATTCGTGACCCAGACTACAGTGTCACACCAAGGCCTCACATTTCCAAGGAATACATGGAAGCAAAACCAGCTACAGAACTTGTGAACCTGAACCCGACTAGCGAATATGCACCTGGCTTGGAGGACACACTCATCTTGACCATGAAAGGTATTGCTGCTGGAATGCAGAATACTGGTTAAGCTAATCCTATTTCATGTCTGTCTTTCATAGTTGATACTTGAGAAAACGCGTCACCTGGAATATGGAAGGATGTTAGTCGTCAAAGATGTTGACGACTAACATCATGATTATGCTCTTGACGCGAAGTCCCGAATAGGGGACCATCACTGAGCAAACTTGCACAAACAGTGAACTAGAATCTTATGTCCCTATTGCAATTGTAGCAACTCTTGAACACTAAGGATCCGTTTGGTTTGATGTGTTATTAGATGAAATATTTATGGTATAAA : AAAAACCAAAAAAATAAAAAATAAAAA</gDNA_template>
            <first_frame> G  S  Q  Q  P  G  S  Y  I  R  L  K  R  S  L  Y  K  S  P  R  S  S  T  *  S  *  P  C  S  M  V  E  V  V  Q  W  E  E  E  V  A  P  P  I  L  P  Y  C  L  N  H  P  K  Q  F  T  D  L  S  V  L  Q  F  R  V  R  L  L  S  T  L  L  G  K  N  T  C  V  L  G  H  S  N  V  I  L  L  L  H  L  N  M  G  C  I  H  Q  S  L  Q  N  Q  N  G  V  H  L  W  T  K  L  Q  L  L  L  Q  K  S  I  D  Q  *  F  L  R  N  P  D  L  S  S  I  S  A  W :   P  H  L  S  *  S  M  V  E  *  T  L  A  A  V  H  Q  S  V  N  P  A  E  A  *  N  H  L  E  L  F  L  G  S  L  L  G  L  K  L  D  S  I  F  Q  S  G  S  A  L  E  Q  H  L  S  M  P  S  K  R  I  S  R  T  S  A  C  C  R  K  C  T  M  H  G  H  S  L  G  *  L  L  I  W  L  R  W  C  S  P  K  E  T  Q  A  L  L  H  C  S  T  S  F  W  Y  L  K  I  C  C  L  S  V  N  F  *  G  Q  T  M  R  R  Q  R  A  S  S  C  R :   L  L  D  T  R  I  F  W  R  V  I  R  T  *  N  N  D  S  G  C  V  T  P  T  S  Q  H  *  T  C  V  K  P  T  P  *  S  V  F  V  T  Q  T  T  V  S  H  Q  G  L  T  F  P  R  N  T  W  K  Q  N  Q  L  Q  N  L  *  T  *  T  R  L  A  N  M  H  L  A  W  R  T  H  S  S  *  P  *  K  V  L  L  L  E  C  R  I  L  V  K  L  I  L  F  H  V  C  L  S  *  L  I  L  E  K  T  R  H  L  E  Y  G  R  M  L  V  V  K  D  V  D  D  *  H  H  D  Y  A  L  D  A  K  S  R  I  G  D  H  H  *  A  N  L  H  K  Q  *  T  R  I  L  C  P  Y  C  N  C  S  N  S  *  T  L  R  I  R  L  V  *  C  V  I  R  *  N  I  Y  G  I  K :   K  T  K  K  I  K  N  K   </first_frame>
            <second_frame>  A  L  S  S  L  A  V  I  *  G  S  R  G  A  Y  T  S  R  Q  G  V  R  R  E  A  N  H  V  P  W  *  R  W  Y  S  G  K  R  R  W  P  R  P  S  C  H  I  V  S  T  T  R  N  N  S  R  I  S  P  C  Y  S  S  G  *  G  Y  *  A  L  F  W  G  R  T  L  V  F  *  D  T  P  T  L  Y  C  C  Y  T  *  T  W  D  A  S  T  S  L  S  K  T  R  M  A  C  T  Y  G  R  N  C  S  C  C  Y  R  K  V  S  I  N  S  F  *  G  T  P  I  C  R  V  F  P  P   : G  H  T  *  V  R  V  W  S  N  E  H  W  Q  P  S  I  K  A  *  T  Q  R  R  H  R  I  T  *  S  Y  S  L  D  L  C  L  D  S  N  *  I  P  S  S  S  L  A  R  L  W  S  S  I  *  V  C  H  R  K  G  Y  Q  E  P  P  H  A  A  G  N  V  Q  C  M  A  I  L  *  G  N  Y  *  F  G  *  D  G  V  R  Q  R  R  P  R  H  C  C  I  V  R  Q  A  S  G  I  *  R  F  V  V  F  R  *  T  F  E  V  K  L  *  G  D  K  E  P  P  P  A   : D  C  W  T  Q  G  S  S  G  G  *  S  V  L  K  T  T  T  Q  A  A  *  L  L  H  H  N  I  E  R  V  S  S  L  H  P  K  A  Y  S  *  P  R  L  Q  C  H  T  K  A  S  H  F  Q  G  I  H  G  S  K  T  S  Y  R  T  C  E  P  E  P  D  *  R  I  C  T  W  L  G  G  H  T  H  L  D  H  E  R  Y  C  C  W  N  A  E  Y  W  L  S  *  S  Y  F  M  S  V  F  H  S  *  Y  L  R  K  R  V  T  W  N  M  E  G  C  *  S  S  K  M  L  T  T  N  I  M  I  M  L  L  T  R  S  P  E  *  G  T  I  T  E  Q  T  C  T  N  S  E  L  E  S  Y  V  P  I  A  I  V  A  T  L  E  H  *  G  S  V  W  F  D  V  L  L  D  E  I  F  M  V  *   : K  K  P  K  K  *  K  I  K  </second_frame>
            <third_frame>   L  S  A  A  W  Q  L  Y  K  A  Q  E  E  L  I  Q  V  A  K  E  F  D  V  K  L  T  M  F  H  G  R  G  G  T  V  G  R  G  G  G  P  A  H  L  A  I  L  S  Q  P  P  E  T  I  H  G  S  L  R  V  T  V  Q  G  E  V  I  E  H  S  F  G  E  E  H  L  C  F  R  T  L  Q  R  Y  T  A  A  T  L  E  H  G  M  H  P  P  V  S  P  K  P  E  W  R  A  L  M  D  E  I  A  V  V  A  T  E  K  Y  R  S  I  V  F  K  E  P  R  F  V  E  Y  F  R  L  :  A  T  P  E  L  E  Y  G  R  M  N  I  G  S  R  P  S  K  R  K  P  S  G  G  I  E  S  L  R  A  I  P  W  I  F  A  W  T  Q  T  R  F  H  L  P  V  W  L  G  F  G  A  A  F  K  Y  A  I  E  K  D  I  K  N  L  R  M  L  Q  E  M  Y  N  A  W  P  F  F  R  V  T  I  D  L  V  E  M  V  F  A  K  G  D  P  G  I  A  A  L  F  D  K  L  L  V  S  E  D  L  L  S  F  G  E  L  L  R  S  N  Y  E  E  T  K  S  L  L  L  Q  :  I  A  G  H  K  D  L  L  E  G  D  P  Y  L  K  Q  R  L  R  L  R  D  S  Y  I  T  T  L  N  V  C  Q  A  Y  T  L  K  R  I  R  D  P  D  Y  S  V  T  P  R  P  H  I  S  K  E  Y  M  E  A  K  P  A  T  E  L  V  N  L  N  P  T  S  E  Y  A  P  G  L  E  D  T  L  I  L  T  M  K  G  I  A  A  G  M  Q  N  T  G  *  A  N  P  I  S  C  L  S  F  I  V  D  T  *  E  N  A  S  P  G  I  W  K  D  V  S  R  Q  R  C  *  R  L  T  S  *  L  C  S  *  R  E  V  P  N  R  G  P  S  L  S  K  L  A  Q  T  V  N  *  N  L  M  S  L  L  Q  L  *  Q  L  L  N  T  K  D  P  F  G  L  M  C  Y  *  M  K  Y  L  W  Y  K  :  K  N  Q  K  N  K  K  *  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96195" stop="95794"/>
                    <exon start="95694" stop="95308"/>
                    <exon start="95191" stop="94898"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1080</number_coding_nucleotides>
                  <number_encoded_amino_acids>360</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSAAWQLYKAQEELIQVAKEFDVKLTMFHGRGGTVGRGGGPAHLAILSQPPETIHGSLRVTVQGEVIEHSFGEEHLCFRTLQRYTAATLEHGMHPPVSPKPEWRALMDEIAVVATEKYRSIVFKEPRFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFHLPVWLGFGAAFKYAIEKDIKNLRMLQEMYNAWPFFRVTIDLVEMVFAKGDPGIAALFDKLLVSEDLLSFGELLRSNYEETKSLLLQIAGHKDLLEGDPYLKQRLRLRDSYITTLNVCQAYTLKRIRDPDYSVTPRPHISKEYMEAKPATELVNLNPTSEYAPGLEDTLILTMKGIAAGMQNTG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="93505" e_stop="93313"/>
            <exon e_start="92385" e_stop="91949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.797" e_score="0.990"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="93505" e_stop="93313" e_length="193"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.797">
            <gDNA_intron_boundary i_start="93312" i_stop="92386" i_length="927"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="92385" e_stop="91949" e_length="437"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93505" stop="93313"/>
              <exon start="92385" stop="91949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E547730" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAAAAACCAAAAAAATAAAAAATAAAAAATAAAAAAAAATGGCAAAGGCTATTTTGGTCCTTTCTGCACTCTGCAGCATATTGGCCTTTGCCAACTTTGCTCAATGCCAAGAAGCCTTCAAAGTTGAAGGCACTGTCTATTGTGACACTTGCCGTGTGCAATTTCAGACCAGAATCAGTGAATACATTGAAG : GAGCAAAAGTGAAGTTGACATGCAGAGACATGGAGACAGAAAAGGTGACATATACAGCAGAAGCATTGACAGACAAGAATGGAAAATACACAATAGAAGCATCAGGTGACCATGAGAAAGAACTTTGTGATGTAGGTGTTGTGCAAAGCCCAAGAGAGGATTGCAAGGACCCTGCAATTGGATTTGAGAACTCAAGAGTTGTGTGCAGTAACAATGTTGGTATGCATAATCCAACTCGCTACGCGAATCCACTATTCTTCATGAAGAAAGAGACTTTGCCTGATTGCAAGGATGTTCTTGATGAGCTTGGTTTATTCCCACTTGAGTTTTAAATTACAAAGTTTTTTAGACCAAAACACACATTACTATTAGCTTTTGCCCTTTTTGTTGAATCGAATTCTCCTGTATGTGTAACTCACCATGCATGAACAACAAAG</gDNA_template>
            <first_frame> R  K  T  K  K  I  K  N  K  K  *  K  K  M  A  K  A  I  L  V  L  S  A  L  C  S  I  L  A  F  A  N  F  A  Q  C  Q  E  A  F  K  V  E  G  T  V  Y  C  D  T  C  R  V  Q  F  Q  T  R  I  S  E  Y  I  E   : G  A  K  V  K  L  T  C  R  D  M  E  T  E  K  V  T  Y  T  A  E  A  L  T  D  K  N  G  K  Y  T  I  E  A  S  G  D  H  E  K  E  L  C  D  V  G  V  V  Q  S  P  R  E  D  C  K  D  P  A  I  G  F  E  N  S  R  V  V  C  S  N  N  V  G  M  H  N  P  T  R  Y  A  N  P  L  F  F  M  K  K  E  T  L  P  D  C  K  D  V  L  D  E  L  G  L  F  P  L  E  F  *  I  T  K  F  F  R  P  K  H  T  L  L  L  A  F  A  L  F  V  E  S  N  S  P  V  C  V  T  H  H  A  *  T  T  K </first_frame>
            <second_frame>  E  K  P  K  K  *  K  I  K  N  K  K  K  W  Q  R  L  F  W  S  F  L  H  S  A  A  Y  W  P  L  P  T  L  L  N  A  K  K  P  S  K  L  K  A  L  S  I  V  T  L  A  V  C  N  F  R  P  E  S  V  N  T  L  K  :  E  Q  K  *  S  *  H  A  E  T  W  R  Q  K  R  *  H  I  Q  Q  K  H  *  Q  T  R  M  E  N  T  Q  *  K  H  Q  V  T  M  R  K  N  F  V  M  *  V  L  C  K  A  Q  E  R  I  A  R  T  L  Q  L  D  L  R  T  Q  E  L  C  A  V  T  M  L  V  C  I  I  Q  L  A  T  R  I  H  Y  S  S  *  R  K  R  L  C  L  I  A  R  M  F  L  M  S  L  V  Y  S  H  L  S  F  K  L  Q  S  F  L  D  Q  N  T  H  Y  Y  *  L  L  P  F  L  L  N  R  I  L  L  Y  V  *  L  T  M  H  E  Q  Q   </second_frame>
            <third_frame>   K  N  Q  K  N  K  K  *  K  I  K  K  N  G  K  G  Y  F  G  P  F  C  T  L  Q  H  I  G  L  C  Q  L  C  S  M  P  R  S  L  Q  S  *  R  H  C  L  L  *  H  L  P  C  A  I  S  D  Q  N  Q  *  I  H  *  R :   S  K  S  E  V  D  M  Q  R  H  G  D  R  K  G  D  I  Y  S  R  S  I  D  R  Q  E  W  K  I  H  N  R  S  I  R  *  P  *  E  R  T  L  *  C  R  C  C  A  K  P  K  R  G  L  Q  G  P  C  N  W  I  *  E  L  K  S  C  V  Q  *  Q  C  W  Y  A  *  S  N  S  L  R  E  S  T  I  L  H  E  E  R  D  F  A  *  L  Q  G  C  S  *  *  A  W  F  I  P  T  *  V  L  N  Y  K  V  F  *  T  K  T  H  I  T  I  S  F  C  P  F  C  *  I  E  F  S  C  M  C  N  S  P  C  M  N  N  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93472" stop="93313"/>
                    <exon start="92385" stop="92054"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>489</number_coding_nucleotides>
                  <number_encoded_amino_acids>163</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKMAKAILVLSALCSILAFANFAQCQEAFKVEGTVYCDTCRVQFQTRISEYIEGAKVKLTCRDMETEKVTYTAEALTDKNGKYTIEASGDHEKELCDVGVVQSPREDCKDPAIGFENSRVVCSNNVGMHNPTRYANPLFFMKKETLPDCKDVLDELGLFPLEF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="101942" PGL_stop="101621"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101942" e_stop="101621"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.910"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.910">
            <gDNA_exon_boundary e_start="101942" e_stop="101621" e_length="322"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101942" stop="101621"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393076" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101942" stop="101638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393075" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAAATTTATGTATATTGCATAATTATAAGTGTATAGCAAGAAAATATATGTTTTTCTCGCTTTATTCAAAAACAGAAACACAATATATACACTTCTGTTGTATAAAGCTAGAAAAATTGTATTTCACTGCAATTGTATAATTCACAATCGTATAATTCTTTGGCCTTTTTCTCTGCAATATTTGAAGTAAAATGTTTGTAAATTATATAATTAAGTGTATAACACGAAGATATACATTTTTGCATGTGTATATACAATTTTCTCTCGCTTTATACAAAACAGAAACAGAAATTATACACTTCTGTGTATAAAGCGAGAGAG</gDNA_template>
            <first_frame> *  N  L  C  I  L  H  N  Y  K  C  I  A  R  K  Y  M  F  F  S  L  Y  S  K  T  E  T  Q  Y  I  H  F  C  C  I  K  L  E  K  L  Y  F  T  A  I  V  *  F  T  I  V  *  F  F  G  L  F  L  C  N  I  *  S  K  M  F  V  N  Y  I  I  K  C  I  T  R  R  Y  T  F  L  H  V  Y  I  Q  F  S  L  A  L  Y  K  T  E  T  E  I  I  H  F  C  V  *  S  E  R  </first_frame>
            <second_frame>  K  I  Y  V  Y  C  I  I  I  S  V  *  Q  E  N  I  C  F  S  R  F  I  Q  K  Q  K  H  N  I  Y  T  S  V  V  *  S  *  K  N  C  I  S  L  Q  L  Y  N  S  Q  S  Y  N  S  L  A  F  F  S  A  I  F  E  V  K  C  L  *  I  I  *  L  S  V  *  H  E  D  I  H  F  C  M  C  I  Y  N  F  L  S  L  Y  T  K  Q  K  Q  K  L  Y  T  S  V  Y  K  A  R  E </second_frame>
            <third_frame>   K  F  M  Y  I  A  *  L  *  V  Y  S  K  K  I  Y  V  F  L  A  L  F  K  N  R  N  T  I  Y  T  L  L  L  Y  K  A  R  K  I  V  F  H  C  N  C  I  I  H  N  R  I  I  L  W  P  F  S  L  Q  Y  L  K  *  N  V  C  K  L  Y  N  *  V  Y  N  T  K  I  Y  I  F  A  C  V  Y  T  I  F  S  R  F  I  Q  N  R  N  R  N  Y  T  L  L  C  I  K  R  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12SLe0004H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="111503" PGL_stop="110628"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111503" e_stop="110628"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111503" e_stop="110628" e_length="876"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111503" stop="110659"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722354" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111452" stop="110628"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E553991" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111393" stop="110739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E608700" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAATTCTACTCACTTTTTCTTCTTTCTTTCATAATAAATCAACAATATTTAATTAAATCTCAAGCTTGAAATGATCATAACTTGCTATTTATAATTTCTTTACCAAGCATATTATATATTGTCAACCTAGGTTGCACAATTAAAATATTTTGATACCTTACTATGATGTCAAATGATCAAATAATAATCGAAGGCGAAGGAGGAGGAGGAGGAGGAGAAGGATCATCATCGAGATCCAAAACCACTATACTTATAGCACCATCTGACGATCATCATCATCATCATCAGCTACCACCAGTACCACCTCAACTGAGTAGATATGAGTCTCAGAAACGTCGCGATTGGAATACTTTTGGACAATACTTGAAAAATCAAAGGCCACCTGTTCCTTTATCCCAGTGTAACTATAACCACGTGCTAGAGTTTCTCCGATACCTAGATCAATTTGGAAAAACTAAGGTACATTTACATGGTTGCCCTTTTTTTGGTCAACCAGAGCCTCCAGGGCCTTGTACTTGTCCTCTTAGACAAGCATGGGGAAGTCTTGATGCACTTATTGGTAGGCTTAGAGCTGCCTATGAAGAAAATGGTGGCTTACCTGAGAATAATCCATTCGCGAGTGGAGCTATACGCGTTTATCTTAGAGAGGTAAGAGATTTTCAAGCTAAAGCAAGAGGAATTTGTTATAAGAAGAAGAAGAAGAAGAGGAAAATGCAAAACAAACCTACTTCTAGTAATGCTCATGAGCCAACTACAACTACCTTTCAATTCCAATCTTCTTGAATTTCTATGAAGGAACAAAGCAAAAGGTAAAAAAAATAAAAAAAATAAAAATTGCTATGTTTTTTTAATAATAAGAGGATTATTTGCTTTGT</gDNA_template>
            <first_frame> I  I  L  L  T  F  S  S  F  F  H  N  K  S  T  I  F  N  *  I  S  S  L  K  *  S  *  L  A  I  Y  N  F  F  T  K  H  I  I  Y  C  Q  P  R  L  H  N  *  N  I  L  I  P  Y  Y  D  V  K  *  S  N  N  N  R  R  R  R  R  R  R  R  R  R  R  I  I  I  E  I  Q  N  H  Y  T  Y  S  T  I  *  R  S  S  S  S  S  S  A  T  T  S  T  T  S  T  E  *  I  *  V  S  E  T  S  R  L  E  Y  F  W  T  I  L  E  K  S  K  A  T  C  S  F  I  P  V  *  L  *  P  R  A  R  V  S  P  I  P  R  S  I  W  K  N  *  G  T  F  T  W  L  P  F  F  W  S  T  R  A  S  R  A  L  Y  L  S  S  *  T  S  M  G  K  S  *  C  T  Y  W  *  A  *  S  C  L  *  R  K  W  W  L  T  *  E  *  S  I  R  E  W  S  Y  T  R  L  S  *  R  G  K  R  F  S  S  *  S  K  R  N  L  L  *  E  E  E  E  E  E  E  N  A  K  Q  T  Y  F  *  *  C  S  *  A  N  Y  N  Y  L  S  I  P  I  F  L  N  F  Y  E  G  T  K  Q  K  V  K  K  I  K  K  I  K  I  A  M  F  F  *  *  *  E  D  Y  L  L  C </first_frame>
            <second_frame>  *  F  Y  S  L  F  L  L  S  F  I  I  N  Q  Q  Y  L  I  K  S  Q  A  *  N  D  H  N  L  L  F  I  I  S  L  P  S  I  L  Y  I  V  N  L  G  C  T  I  K  I  F  *  Y  L  T  M  M  S  N  D  Q  I  I  I  E  G  E  G  G  G  G  G  G  E  G  S  S  S  R  S  K  T  T  I  L  I  A  P  S  D  D  H  H  H  H  H  Q  L  P  P  V  P  P  Q  L  S  R  Y  E  S  Q  K  R  R  D  W  N  T  F  G  Q  Y  L  K  N  Q  R  P  P  V  P  L  S  Q  C  N  Y  N  H  V  L  E  F  L  R  Y  L  D  Q  F  G  K  T  K  V  H  L  H  G  C  P  F  F  G  Q  P  E  P  P  G  P  C  T  C  P  L  R  Q  A  W  G  S  L  D  A  L  I  G  R  L  R  A  A  Y  E  E  N  G  G  L  P  E  N  N  P  F  A  S  G  A  I  R  V  Y  L  R  E  V  R  D  F  Q  A  K  A  R  G  I  C  Y  K  K  K  K  K  K  R  K  M  Q  N  K  P  T  S  S  N  A  H  E  P  T  T  T  T  F  Q  F  Q  S  S  *  I  S  M  K  E  Q  S  K  R  *  K  K  *  K  K  *  K  L  L  C  F  F  N  N  K  R  I  I  C  F   </second_frame>
            <third_frame>   N  S  T  H  F  F  F  F  L  S  *  *  I  N  N  I  *  L  N  L  K  L  E  M  I  I  T  C  Y  L  *  F  L  Y  Q  A  Y  Y  I  L  S  T  *  V  A  Q  L  K  Y  F  D  T  L  L  *  C  Q  M  I  K  *  *  S  K  A  K  E  E  E  E  E  E  K  D  H  H  R  D  P  K  P  L  Y  L  *  H  H  L  T  I  I  I  I  I  I  S  Y  H  Q  Y  H  L  N  *  V  D  M  S  L  R  N  V  A  I  G  I  L  L  D  N  T  *  K  I  K  G  H  L  F  L  Y  P  S  V  T  I  T  T  C  *  S  F  S  D  T  *  I  N  L  E  K  L  R  Y  I  Y  M  V  A  L  F  L  V  N  Q  S  L  Q  G  L  V  L  V  L  L  D  K  H  G  E  V  L  M  H  L  L  V  G  L  E  L  P  M  K  K  M  V  A  Y  L  R  I  I  H  S  R  V  E  L  Y  A  F  I  L  E  R  *  E  I  F  K  L  K  Q  E  E  F  V  I  R  R  R  R  R  R  G  K  C  K  T  N  L  L  L  V  M  L  M  S  Q  L  Q  L  P  F  N  S  N  L  L  E  F  L  *  R  N  K  A  K  G  K  K  N  K  K  N  K  N  C  Y  V  F  L  I  I  R  G  L  F  A  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111349" stop="110720"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>627</number_coding_nucleotides>
                  <number_encoded_amino_acids>209</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YLTMMSNDQIIIEGEGGGGGGEGSSSRSKTTILIAPSDDHHHHHQLPPVPPQLSRYESQKRRDWNTFGQYLKNQRPPVPLSQCNYNHVLEFLRYLDQFGKTKVHLHGCPFFGQPEPPGPCTCPLRQAWGSLDALIGRLRAAYEENGGLPENNPFASGAIRVYLREVRDFQAKARGICYKKKKKKRKMQNKPTSSNAHEPTTTTFQFQSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="116615" PGL_stop="117292"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116615" e_stop="117292"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="116615" e_stop="117292" e_length="678"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116615" stop="117292"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372441" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAGTGATTCAGGTAAATTGTAATATCACTTTAAGTATAATTCTCCCAGGGAAAACCACTGGTGACAATTTTAGTGAAGTTTAATCTTGGAATATCCAGCAACACAAATGCAAGGTGATGCTATTGTTTGAAACTTGTCTCTTATTGCACAAAGTGAAAACCCGAACAAACGCAAGAAACAAAAGAGGCAATGCAGAAGTATTGCCTTACAATCATAATTGGAAGGCCGTGACAGTTGACAACTTCTTTGACAGCAGTAAACATAGAGGAACTGTTATGTTGAAGGAGTGGAAGACAATAAAATGGAGCAATGTCAGACACCATCTTTAACATCACCAAGATGAGATGCCAAAGAGACCCTTCGAGCAGGAACAGATTGAAATTTGCCAAAGCTGAAAGGCAAACGAGACAAAGTGATTCTGGGGCAATTATCGCTAACTTTATCATAATGTATTGTGTAATTTGAGCTGCTTATGTTCCTGGAGTAGCAGAATGAATCATCCTTATATTTATAGACTTGTTGGGTACTCCCGATCCCACTGACAACCAATTGCCCCTTTACAAGAATATGTCCCTGTGCTTTTTGCATGTTTTCAGTAGAGCTGGCTGACGATACGTTCTTGGAAGTCTTTATCCTATTATCATCAAATCCCAACGTAACATTTGAGATTGAGGCAT</gDNA_template>
            <first_frame> K  V  I  Q  V  N  C  N  I  T  L  S  I  I  L  P  G  K  T  T  G  D  N  F  S  E  V  *  S  W  N  I  Q  Q  H  K  C  K  V  M  L  L  F  E  T  C  L  L  L  H  K  V  K  T  R  T  N  A  R  N  K  R  G  N  A  E  V  L  P  Y  N  H  N  W  K  A  V  T  V  D  N  F  F  D  S  S  K  H  R  G  T  V  M  L  K  E  W  K  T  I  K  W  S  N  V  R  H  H  L  *  H  H  Q  D  E  M  P  K  R  P  F  E  Q  E  Q  I  E  I  C  Q  S  *  K  A  N  E  T  K  *  F  W  G  N  Y  R  *  L  Y  H  N  V  L  C  N  L  S  C  L  C  S  W  S  S  R  M  N  H  P  Y  I  Y  R  L  V  G  Y  S  R  S  H  *  Q  P  I  A  P  L  Q  E  Y  V  P  V  L  F  A  C  F  Q  *  S  W  L  T  I  R  S  W  K  S  L  S  Y  Y  H  Q  I  P  T  *  H  L  R  L  R  H </first_frame>
            <second_frame>  K  *  F  R  *  I  V  I  S  L  *  V  *  F  S  Q  G  K  P  L  V  T  I  L  V  K  F  N  L  G  I  S  S  N  T  N  A  R  *  C  Y  C  L  K  L  V  S  Y  C  T  K  *  K  P  E  Q  T  Q  E  T  K  E  A  M  Q  K  Y  C  L  T  I  I  I  G  R  P  *  Q  L  T  T  S  L  T  A  V  N  I  E  E  L  L  C  *  R  S  G  R  Q  *  N  G  A  M  S  D  T  I  F  N  I  T  K  M  R  C  Q  R  D  P  S  S  R  N  R  L  K  F  A  K  A  E  R  Q  T  R  Q  S  D  S  G  A  I  I  A  N  F  I  I  M  Y  C  V  I  *  A  A  Y  V  P  G  V  A  E  *  I  I  L  I  F  I  D  L  L  G  T  P  D  P  T  D  N  Q  L  P  L  Y  K  N  M  S  L  C  F  L  H  V  F  S  R  A  G  *  R  Y  V  L  G  S  L  Y  P  I  I  I  K  S  Q  R  N  I  *  D  *  G   </second_frame>
            <third_frame>   S  D  S  G  K  L  *  Y  H  F  K  Y  N  S  P  R  E  N  H  W  *  Q  F  *  *  S  L  I  L  E  Y  P  A  T  Q  M  Q  G  D  A  I  V  *  N  L  S  L  I  A  Q  S  E  N  P  N  K  R  K  K  Q  K  R  Q  C  R  S  I  A  L  Q  S  *  L  E  G  R  D  S  *  Q  L  L  *  Q  Q  *  T  *  R  N  C  Y  V  E  G  V  E  D  N  K  M  E  Q  C  Q  T  P  S  L  T  S  P  R  *  D  A  K  E  T  L  R  A  G  T  D  *  N  L  P  K  L  K  G  K  R  D  K  V  I  L  G  Q  L  S  L  T  L  S  *  C  I  V  *  F  E  L  L  M  F  L  E  *  Q  N  E  S  S  L  Y  L  *  T  C  W  V  L  P  I  P  L  T  T  N  C  P  F  T  R  I  C  P  C  A  F  C  M  F  S  V  E  L  A  D  D  T  F  L  E  V  F  I  L  L  S  S  N  P  N  V  T  F  E  I  E  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116699" stop="116944"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SWNIQQHKCKVMLLFETCLLLHKVKTRTNARNKRGNAEVLPYNHNWKAVTVDNFFDSSKHRGTVMLKEWKTIKWSNVRHHL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="117606" PGL_stop="116787"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117606" e_stop="116787"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="117606" e_stop="116787" e_length="820"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117606" stop="116867"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117606" stop="117021"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E430543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117606" stop="117098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117401" stop="116787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117401" stop="116913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294173" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCGTTTTCTCTTAGGACAAATTTTACAGGCATTGATGGATCTTTCGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTTAAGTCATCCTACGGGAACATCACTACTAAGTCAGCTCAAGTTTTAAGTTATAGTAATTATATGGTGGAGGGTAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTATTGTCTTCCACTCCTTCAACATAACAGTTCCTCTATGTTTACTGCTGTCAAAGAAGTTGTCAACTGTCACGGCCTTCCAATTATGATTGTAAGGCAATACTTCTGCATTGCCTCTTTTGTTTCTTG</gDNA_template>
            <first_frame> F  V  F  S  *  D  K  F  Y  R  H  *  W  I  F  R  H  K  C  *  *  I  N  H  I  D  R  M  G  *  V  I  L  R  E  H  H  Y  *  V  S  S  S  F  K  L  *  *  L  Y  G  G  G  *  R  R  K  F  A  K  C  G  S  D  Y  L  F  Q  *  N  C  *  C  R  E  A  N  F  I  C  S  V  S  *  V  L  Q  K  V  S  A  S  L  A  F  *  Q  C  R  Q  R  R  *  K  L  C  L  N  L  K  C  Y  V  G  I  *  *  *  *  D  K  D  F  Q  E  R  I  V  S  Q  L  Y  *  K  H  A  K  S  T  G  T  Y  S  C  K  G  A  I  G  C  Q  W  D  R  E  Y  P  T  S  L  *  I  *  G  *  F  I  L  L  L  Q  E  H  K  Q  L  K  L  H  N  T  L  *  *  S  *  R  *  L  P  Q  N  H  F  V  S  F  A  F  Q  L  W  Q  I  S  I  C  S  C  S  K  G  L  F  G  I  S  S  W  *  C  *  R  W  C  L  T  L  L  H  F  I  V  F  H  S  F  N  I  T  V  P  L  C  L  L  L  S  K  K  L  S  T  V  T  A  F  Q  L  *  L  *  G  N  T  S  A  L  P  L  L  F  L  </first_frame>
            <second_frame>  S  F  S  L  R  T  N  F  T  G  I  D  G  S  F  V  T  N  A  S  R  S  I  T  L  T  G  W  V  K  S  S  Y  G  N  I  T  T  K  S  A  Q  V  L  S  Y  S  N  Y  M  V  E  G  N  G  G  N  L  Q  N  V  D  Q  I  I  Y  F  N  E  T  V  D  V  V  R  P  T  S  Y  V  Q  S  R  K  S  F  K  K  F  L  L  L  L  H  S  D  N  V  D  K  G  D  E  S  Y  A  S  I  S  N  V  T  L  G  F  D  D  N  R  I  K  T  S  K  N  V  S  S  A  S  S  T  E  N  M  Q  K  A  Q  G  H  I  L  V  K  G  Q  L  V  V  S  G  I  G  S  T  Q  Q  V  Y  K  Y  K  D  D  S  F  C  Y  S  R  N  I  S  S  S  N  Y  T  I  H  Y  D  K  V  S  D  N  C  P  R  I  T  L  S  R  L  P  F  S  F  G  K  F  Q  S  V  P  A  R  R  V  S  L  A  S  H  L  G  D  V  K  D  G  V  *  H  C  S  I  L  L  S  S  T  P  S  T  *  Q  F  L  Y  V  Y  C  C  Q  R  S  C  Q  L  S  R  P  S  N  Y  D  C  K  A  I  L  L  H  C  L  F  C  F  L </second_frame>
            <third_frame>   R  F  L  L  G  Q  I  L  Q  A  L  M  D  L  S  S  Q  M  L  V  D  Q  S  H  *  Q  D  G  L  S  H  P  T  G  T  S  L  L  S  Q  L  K  F  *  V  I  V  I  I  W  W  R  V  T  E  E  I  C  K  M  W  I  R  L  F  I  S  M  K  L  L  M  S  *  G  Q  L  H  M  F  S  L  V  S  P  S  K  S  F  C  F  S  C  I  L  T  M  *  T  K  E  M  K  A  M  P  Q  S  Q  M  L  R  W  D  L  M  I  I  G  *  R  L  P  R  T  Y  R  Q  P  A  L  L  K  T  C  K  K  H  R  D  I  F  L  *  R  G  N  W  L  S  V  G  S  G  V  P  N  K  S  I  N  I  R  M  I  H  S  A  T  P  G  T  *  A  A  Q  I  T  Q  Y  I  M  I  K  L  A  I  I  A  P  E  S  L  C  L  V  C  L  S  A  L  A  N  F  N  L  F  L  L  E  G  S  L  W  H  L  I  L  V  M  L  K  M  V  S  D  I  A  P  F  Y  C  L  P  L  L  Q  H  N  S  S  S  M  F  T  A  V  K  E  V  V  N  C  H  G  L  P  I  M  I  V  R  Q  Y  F  C  I  A  S  F  V  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117605" stop="116928"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFSLRTNFTGIDGSFVTNASRSITLTGWVKSSYGNITTKSAQVLSYSNYMVEGNGGNLQNVDQIIYFNETVDVVRPTSYVQSRKSFKKFLLLLHSDNVDKGDESYASISNVTLGFDDNRIKTSKNVSSASSTENMQKAQGHILVKGQLVVSGIGSTQQVYKYKDDSFCYSRNISSSNYTIHYDKVSDNCPRITLSRLPFSFGKFQSVPARRVSLASHLGDVKDGV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="117472" PGL_stop="117934"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="117472" e_stop="117934"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.911"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.911">
            <gDNA_exon_boundary e_start="117472" e_stop="117934" e_length="463"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="117472" stop="117934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E562229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTAAAACTTGAGCTGACTTAGTAGTGATGTTCCCGTAGGATGACTTAACCCATCCTGTCAATGTGATTGATCTACTAGCATTTGTGACGAAAGATCCATCAATGCCTGTAAAATTTGTCCTAAGAGAAAACGAAAGAGGCAGACTAGTATACTTCAATAACTTCCCTTCTGTCTTTATACTCTTATCATCCAACCAAAGATGCAAATTTGCATCAATGTACCACACATTAAGAGCATTAGTGACACTGAATGAAATCTTATGCATATTTCCGTCTAAAATCTTCCCTATAAATGGCGTTATTTCAATATCATATGATGGAAGATCAAACGATCCGATCCCGCTTATAGGTCTCCACAAGAGAGGATTGACACCCCCGGTATAGATCACCGTGAACGGCCAAACTACACCAACCACCACATCATCCACACTAACTACTACTTCCCTAAAAGCTCCATTCCCTG</gDNA_template>
            <first_frame> L  K  T  *  A  D  L  V  V  M  F  P  *  D  D  L  T  H  P  V  N  V  I  D  L  L  A  F  V  T  K  D  P  S  M  P  V  K  F  V  L  R  E  N  E  R  G  R  L  V  Y  F  N  N  F  P  S  V  F  I  L  L  S  S  N  Q  R  C  K  F  A  S  M  Y  H  T  L  R  A  L  V  T  L  N  E  I  L  C  I  F  P  S  K  I  F  P  I  N  G  V  I  S  I  S  Y  D  G  R  S  N  D  P  I  P  L  I  G  L  H  K  R  G  L  T  P  P  V  *  I  T  V  N  G  Q  T  T  P  T  T  T  S  S  T  L  T  T  T  S  L  K  A  P  F  P  </first_frame>
            <second_frame>  L  K  L  E  L  T  *  *  *  C  S  R  R  M  T  *  P  I  L  S  M  *  L  I  Y  *  H  L  *  R  K  I  H  Q  C  L  *  N  L  S  *  E  K  T  K  E  A  D  *  Y  T  S  I  T  S  L  L  S  L  Y  S  Y  H  P  T  K  D  A  N  L  H  Q  C  T  T  H  *  E  H  *  *  H  *  M  K  S  Y  A  Y  F  R  L  K  S  S  L  *  M  A  L  F  Q  Y  H  M  M  E  D  Q  T  I  R  S  R  L  *  V  S  T  R  E  D  *  H  P  R  Y  R  S  P  *  T  A  K  L  H  Q  P  P  H  H  P  H  *  L  L  L  P  *  K  L  H  S  L </second_frame>
            <third_frame>   *  N  L  S  *  L  S  S  D  V  P  V  G  *  L  N  P  S  C  Q  C  D  *  S  T  S  I  C  D  E  R  S  I  N  A  C  K  I  C  P  K  R  K  R  K  R  Q  T  S  I  L  Q  *  L  P  F  C  L  Y  T  L  I  I  Q  P  K  M  Q  I  C  I  N  V  P  H  I  K  S  I  S  D  T  E  *  N  L  M  H  I  S  V  *  N  L  P  Y  K  W  R  Y  F  N  I  I  *  W  K  I  K  R  S  D  P  A  Y  R  S  P  Q  E  R  I  D  T  P  G  I  D  H  R  E  R  P  N  Y  T  N  H  H  I  I  H  T  N  Y  Y  F  P  K  S  S  I  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="117511" stop="117855"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DDLTHPVNVIDLLAFVTKDPSMPVKFVLRENERGRLVYFNNFPSVFILLSSNQRCKFASMYHTLRALVTLNEILCIFPSKIFPINGVISISYDGRSNDPIPLIGLHKRGLTPPV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="121405" PGL_stop="119814"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121405" e_stop="120699"/>
            <exon e_start="120617" e_stop="120326"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="121405" e_stop="120699" e_length="707"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="120698" i_stop="120618" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="120617" e_stop="120326" e_length="292"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121405" stop="120699"/>
              <exon start="120617" stop="120516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540596" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121405" stop="120719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121404" stop="120889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289413" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121099" stop="120699"/>
              <exon start="120617" stop="120326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540600" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120793" stop="120699"/>
              <exon start="120617" stop="120330"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230931" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120757" stop="120699"/>
              <exon start="120617" stop="120328"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218155" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTTATGCCTCATTCTTTAGATTCTGATGCGATTTCTGATACCATCAAATCATTTTTCCCAATGGGAGGTAGTGGTTCAAATGAAGGTAATTCTTTCCAGAGTTTTCAACAACATAATTTGATGTCAAGAAGCCAAGATTTGAAGCTTTCTTTACAATCTTTTCAAGATCCACAAGCTCAGTTTGAAGCATCAAATTTCTTTACTGGATTTGATGCTTCAGTGTGGCCTCAGCACCAGCAGCAGCCGGTTGAACTTGGTCGACTGGCGGCTGCTCGTGGAGACATTGGTGGCGGGGCAATTGCTGGAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTATTCAACATCACTTTCTGGCATCGGATTCGCCTCAGAATTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGGAGCATGATGGTGTTTCCGACAAACCATCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAG : GAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTGGTAT</gDNA_template>
            <first_frame> V  L  C  L  I  L  *  I  L  M  R  F  L  I  P  S  N  H  F  S  Q  W  E  V  V  V  Q  M  K  V  I  L  S  R  V  F  N  N  I  I  *  C  Q  E  A  K  I  *  S  F  L  Y  N  L  F  K  I  H  K  L  S  L  K  H  Q  I  S  L  L  D  L  M  L  Q  C  G  L  S  T  S  S  S  R  L  N  L  V  D  W  R  L  L  V  E  T  L  V  A  G  Q  L  L  E  Q  V  V  I  C  L  T  L  S  L  P  R  R  Y  Y  N  N  C  S  L  K  I  S  F  C  L  R  G  D  P  F  S  P  V  T  H  L  R  F  V  H  G  *  I  H  Q  R  L  L  S  P  Q  L  I  Q  F  T  K  T  K  T  I  I  K  L  C  F  L  C  I  Q  H  H  F  L  A  S  D  S  P  Q  N  *  A  D  S  L  A  F  A  F  L  H  E  S  K  V  K  *  R  R  S  M  M  V  F  P  T  N  H  P  L  L  P  L  I  L  V  I  E  S  A  R  K  H  N  L  P  L  *  P  D  R :   N  K  Y  Y  I  *  R  W  K  W  E  K  T  S  Q  G  K  R  D  N  P  F  L  S  S  L  I  Q  *  E  C  T  A  E  E  E  S  *  A  *  F  Q  V  F  F  *  D  *  I  A  V  *  C  S  C  I  S  V  F  F  C  C  *  V  V  V  V  V  V  V  V  C  L  L  S  S  V  H  *  N  K  *  F  S  L  E  *  Q  L  L  S  T  *  L  I  W  Y </first_frame>
            <second_frame>  F  Y  A  S  F  F  R  F  *  C  D  F  *  Y  H  Q  I  I  F  P  N  G  R  *  W  F  K  *  R  *  F  F  P  E  F  S  T  T  *  F  D  V  K  K  P  R  F  E  A  F  F  T  I  F  S  R  S  T  S  S  V  *  S  I  K  F  L  Y  W  I  *  C  F  S  V  A  S  A  P  A  A  A  G  *  T  W  S  T  G  G  C  S  W  R  H  W  W  R  G  N  C  W  S  R  *  L  S  V  *  L  S  A  C  P  A  A  I  T  T  I  V  H  S  K  S  V  F  V  S  E  G  T  P  S  V  Q  L  L  T  F  D  S  C  M  D  R  S  I  S  D  C  Y  R  H  S  *  S  N  S  P  K  P  K  P  S  S  S  C  V  S  Y  V  F  N  I  T  F  W  H  R  I  R  L  R  I  R  R  I  L  W  L  S  H  S  Y  T  N  P  R  *  N  R  G  G  A  *  W  C  F  R  Q  T  I  L  C  F  L  *  F  S  S  L  N  Q  L  G  N  T  I  S  H  Y  N  L  T   : G  T  S  T  I  F  E  D  G  N  G  K  R  Q  V  R  E  S  A  I  I  H  F  Y  R  V  *  F  S  E  N  A  P  R  K  K  N  P  E  H  S  F  R  F  F  S  K  I  K  *  R  C  N  V  H  V  *  V  C  F  S  V  A  K  L  L  L  L  L  L  L  C  A  Y  Y  L  Q  F  I  R  T  S  N  F  L  L  N  D  N  Y  Y  Q  P  D  *  F  G   </second_frame>
            <third_frame>   F  M  P  H  S  L  D  S  D  A  I  S  D  T  I  K  S  F  F  P  M  G  G  S  G  S  N  E  G  N  S  F  Q  S  F  Q  Q  H  N  L  M  S  R  S  Q  D  L  K  L  S  L  Q  S  F  Q  D  P  Q  A  Q  F  E  A  S  N  F  F  T  G  F  D  A  S  V  W  P  Q  H  Q  Q  Q  P  V  E  L  G  R  L  A  A  A  R  G  D  I  G  G  G  A  I  A  G  A  G  S  Y  L  F  N  S  Q  P  A  P  P  L  L  Q  Q  L  F  T  Q  N  Q  F  L  S  Q  R  G  P  L  Q  S  S  Y  S  P  S  I  R  A  W  I  D  P  S  A  I  A  I  A  T  A  D  P  I  H  Q  N  Q  N  H  H  Q  A  V  F  P  M  Y  S  T  S  L  S  G  I  G  F  A  S  E  L  G  G  F  S  G  F  R  I  P  T  R  I  Q  G  E  I  E  E  E  H  D  G  V  S  D  K  P  S  S  A  S  S  D  S  R  H  *  I  S  S  E  T  Q  S  P  I  I  T  *  Q  :  E  Q  V  L  Y  L  K  M  E  M  G  K  D  K  S  G  K  A  R  *  S  I  F  I  E  S  D  S  V  R  M  H  R  G  R  R  I  L  S  I  V  S  G  F  F  L  R  L  N  S  G  V  M  F  M  Y  K  C  V  F  L  L  L  S  C  C  C  C  C  C  C  V  L  I  I  F  S  S  L  E  Q  V  I  F  S  *  M  T  I  I  I  N  L  I  D  L  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121403" stop="120738"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FMPHSLDSDAISDTIKSFFPMGGSGSNEGNSFQSFQQHNLMSRSQDLKLSLQSFQDPQAQFEASNFFTGFDASVWPQHQQQPVELGRLAAARGDIGGGAIAGAGSYLFNSQPAPPLLQQLFTQNQFLSQRGPLQSSYSPSIRAWIDPSAIAIATADPIHQNQNHHQAVFPMYSTSLSGIGFASELGGFSGFRIPTRIQGEIEEEHDGVSDKPSSASSDSRH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120557" stop="120360"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFIESDSVRMHRGRRILSIVSGFFLRLNSGVMFMYKCVFLLLSCCCCCCCVLIIFSSLEQVIFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="121405" e_stop="120699"/>
            <exon e_start="120617" e_stop="120330"/>
            <exon e_start="119832" e_stop="119814"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.841" e_score="1.000"/>
          <exon-only e_score="0.579"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="121405" e_stop="120699" e_length="707"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="120698" i_stop="120618" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="120617" e_stop="120330" e_length="288"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.841">
            <gDNA_intron_boundary i_start="120329" i_stop="119833" i_length="497"/>
          </intron>
          <exon e_serial="3" e_score="0.579">
            <gDNA_exon_boundary e_start="119832" e_stop="119814" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121405" stop="120699"/>
              <exon start="120617" stop="120516"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540596" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121405" stop="120719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121404" stop="120889"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289413" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120793" stop="120699"/>
              <exon start="120617" stop="120330"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230931" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="120752" stop="120699"/>
              <exon start="120617" stop="120330"/>
              <exon start="119832" stop="119814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E230431" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTTTTATGCCTCATTCTTTAGATTCTGATGCGATTTCTGATACCATCAAATCATTTTTCCCAATGGGAGGTAGTGGTTCAAATGAAGGTAATTCTTTCCAGAGTTTTCAACAACATAATTTGATGTCAAGAAGCCAAGATTTGAAGCTTTCTTTACAATCTTTTCAAGATCCACAAGCTCAGTTTGAAGCATCAAATTTCTTTACTGGATTTGATGCTTCAGTGTGGCCTCAGCACCAGCAGCAGCCGGTTGAACTTGGTCGACTGGCGGCTGCTCGTGGAGACATTGGTGGCGGGGCAATTGCTGGAGCAGGTAGTTATCTGTTTAACTCTCAGCCTGCCCCGCCGCTATTACAACAATTGTTCACTCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGATTCGTGCATGGATAGATCCATCAGCGATTGCTATCGCCACAGCTGATCCAATTCACCAAAACCAAAACCATCATCAAGCTGTGTTTCCTATGTATTCAACATCACTTTCTGGCATCGGATTCGCCTCAGAATTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGGAGCATGATGGTGTTTCCGACAAACCATCCTCTGCTTCCTCTGATTCTCGTCATTGAATCAGCTCGGAAACACAATCTCCCATTATAACCTGACAG : GAACAAGTACTATATTTGAAGATGGAAATGGGAAAAGACAAGTCAGGGAAAGCGCGATAATCCATTTTTATCGAGTCTGATTCAGTGAGAATGCACCGCGGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTCTAAGATTAAATAGCGGTGTAATGTTCATGTATAAGTGTGTTTTTCTGTTGCTAAGTTGTTGTTGTTGTTGTTGTTGTGTGCTTATTATCTTCAGTTCATTAGAACAAGTAATTTTCTCTTGAATGACAATTATTATCAACCTGATTGATTTG : GTCGAACAAATAGATACAC</gDNA_template>
            <first_frame> V  L  C  L  I  L  *  I  L  M  R  F  L  I  P  S  N  H  F  S  Q  W  E  V  V  V  Q  M  K  V  I  L  S  R  V  F  N  N  I  I  *  C  Q  E  A  K  I  *  S  F  L  Y  N  L  F  K  I  H  K  L  S  L  K  H  Q  I  S  L  L  D  L  M  L  Q  C  G  L  S  T  S  S  S  R  L  N  L  V  D  W  R  L  L  V  E  T  L  V  A  G  Q  L  L  E  Q  V  V  I  C  L  T  L  S  L  P  R  R  Y  Y  N  N  C  S  L  K  I  S  F  C  L  R  G  D  P  F  S  P  V  T  H  L  R  F  V  H  G  *  I  H  Q  R  L  L  S  P  Q  L  I  Q  F  T  K  T  K  T  I  I  K  L  C  F  L  C  I  Q  H  H  F  L  A  S  D  S  P  Q  N  *  A  D  S  L  A  F  A  F  L  H  E  S  K  V  K  *  R  R  S  M  M  V  F  P  T  N  H  P  L  L  P  L  I  L  V  I  E  S  A  R  K  H  N  L  P  L  *  P  D  R :   N  K  Y  Y  I  *  R  W  K  W  E  K  T  S  Q  G  K  R  D  N  P  F  L  S  S  L  I  Q  *  E  C  T  A  E  E  E  S  *  A  *  F  Q  V  F  F  *  D  *  I  A  V  *  C  S  C  I  S  V  F  F  C  C  *  V  V  V  V  V  V  V  V  C  L  L  S  S  V  H  *  N  K  *  F  S  L  E  *  Q  L  L  S  T  *  L  I  W :   S  N  K  *  I  H </first_frame>
            <second_frame>  F  Y  A  S  F  F  R  F  *  C  D  F  *  Y  H  Q  I  I  F  P  N  G  R  *  W  F  K  *  R  *  F  F  P  E  F  S  T  T  *  F  D  V  K  K  P  R  F  E  A  F  F  T  I  F  S  R  S  T  S  S  V  *  S  I  K  F  L  Y  W  I  *  C  F  S  V  A  S  A  P  A  A  A  G  *  T  W  S  T  G  G  C  S  W  R  H  W  W  R  G  N  C  W  S  R  *  L  S  V  *  L  S  A  C  P  A  A  I  T  T  I  V  H  S  K  S  V  F  V  S  E  G  T  P  S  V  Q  L  L  T  F  D  S  C  M  D  R  S  I  S  D  C  Y  R  H  S  *  S  N  S  P  K  P  K  P  S  S  S  C  V  S  Y  V  F  N  I  T  F  W  H  R  I  R  L  R  I  R  R  I  L  W  L  S  H  S  Y  T  N  P  R  *  N  R  G  G  A  *  W  C  F  R  Q  T  I  L  C  F  L  *  F  S  S  L  N  Q  L  G  N  T  I  S  H  Y  N  L  T   : G  T  S  T  I  F  E  D  G  N  G  K  R  Q  V  R  E  S  A  I  I  H  F  Y  R  V  *  F  S  E  N  A  P  R  K  K  N  P  E  H  S  F  R  F  F  S  K  I  K  *  R  C  N  V  H  V  *  V  C  F  S  V  A  K  L  L  L  L  L  L  L  C  A  Y  Y  L  Q  F  I  R  T  S  N  F  L  L  N  D  N  Y  Y  Q  P  D  *  F   : G  R  T  N  R  Y   </second_frame>
            <third_frame>   F  M  P  H  S  L  D  S  D  A  I  S  D  T  I  K  S  F  F  P  M  G  G  S  G  S  N  E  G  N  S  F  Q  S  F  Q  Q  H  N  L  M  S  R  S  Q  D  L  K  L  S  L  Q  S  F  Q  D  P  Q  A  Q  F  E  A  S  N  F  F  T  G  F  D  A  S  V  W  P  Q  H  Q  Q  Q  P  V  E  L  G  R  L  A  A  A  R  G  D  I  G  G  G  A  I  A  G  A  G  S  Y  L  F  N  S  Q  P  A  P  P  L  L  Q  Q  L  F  T  Q  N  Q  F  L  S  Q  R  G  P  L  Q  S  S  Y  S  P  S  I  R  A  W  I  D  P  S  A  I  A  I  A  T  A  D  P  I  H  Q  N  Q  N  H  H  Q  A  V  F  P  M  Y  S  T  S  L  S  G  I  G  F  A  S  E  L  G  G  F  S  G  F  R  I  P  T  R  I  Q  G  E  I  E  E  E  H  D  G  V  S  D  K  P  S  S  A  S  S  D  S  R  H  *  I  S  S  E  T  Q  S  P  I  I  T  *  Q  :  E  Q  V  L  Y  L  K  M  E  M  G  K  D  K  S  G  K  A  R  *  S  I  F  I  E  S  D  S  V  R  M  H  R  G  R  R  I  L  S  I  V  S  G  F  F  L  R  L  N  S  G  V  M  F  M  Y  K  C  V  F  L  L  L  S  C  C  C  C  C  C  C  V  L  I  I  F  S  S  L  E  Q  V  I  F  S  *  M  T  I  I  I  N  L  I  D  L  :  V  E  Q  I  D  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="121403" stop="120738"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>663</number_coding_nucleotides>
                  <number_encoded_amino_acids>221</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FMPHSLDSDAISDTIKSFFPMGGSGSNEGNSFQSFQQHNLMSRSQDLKLSLQSFQDPQAQFEASNFFTGFDASVWPQHQQQPVELGRLAAARGDIGGGAIAGAGSYLFNSQPAPPLLQQLFTQNQFLSQRGPLQSSYSPSIRAWIDPSAIAIATADPIHQNQNHHQAVFPMYSTSLSGIGFASELGGFSGFRIPTRIQGEIEEEHDGVSDKPSSASSDSRH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="120557" stop="120360"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SIFIESDSVRMHRGRRILSIVSGFFLRLNSGVMFMYKCVFLLLSCCCCCCCVLIIFSSLEQVIFS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="+" PGL_start="130252" PGL_stop="131324"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="130252" e_stop="130255"/>
            <exon e_start="130557" e_stop="131324"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.633" acc_prob="0.000" e_score="0.750"/>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.750">
            <gDNA_exon_boundary e_start="130252" e_stop="130255" e_length="4"/>
          </exon>
          <intron i_serial="1" don_prob="0.633" acc_prob="0.000">
            <gDNA_intron_boundary i_start="130256" i_stop="130556" i_length="301"/>
          </intron>
          <exon e_serial="2" e_score="0.901">
            <gDNA_exon_boundary e_start="130557" e_stop="131324" e_length="768"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="130252" stop="130255"/>
              <exon start="130557" stop="131324"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538064" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAG : ATGTTTGCCAATCTGTGTTATGAAAATCAGAAATTACTGGTTGTAATAAATTTTTCAGAAACATGAAATAACTGAGATTTATAGAACCAGTAAGTAAGATGAACATAAATTTATTTGTAAAAAATAATTGAATCTGTAAAAACTTACCAGAATCTGGAATACTCTTTTTTATCTTGAAAGAAAATCAAGTCCACTGAATTCACAGTGTCCCCTTAAGGAAATTATTCCCCTCTAGTATCCGAGGTTTTATTTGGAATATAACCTCCCAGGGTAAAATGATCTTAATCAGTAGAGTGTAGATACCAAAAACTCTATTGTCAGCGAATCAAGCCACAGCAGGAAAGTACACGAAGAAATATGTGTTTAGAAGAAGAAGGAAGATCAGAAAATTCGTAATAAAATATTCTGAAGACTGAATGGTATTTATAGGCAAGAAGAATATATTCTGAAAGGTTGCAACCCTTTCAGAATTGACACGACCATTAATGAAAGGTTGCAAACTTTCAAATGGTATTGACTGTTCCTGAAAGTTGCAACCTTTCAGAACAGTCATGGCGGGAATTTTAAATATAACGGAAATTAAACGGGTCACGTGCGCGGATTCGAGTCGGGTCGGATTAACTAAAAAGTTGAAAACATTTCGGTTAACTTCTGTTATAAAATAATTAATTGAAAATAATTTTTTTGTCCATTTAATTAATTAAATAAATAAATAAAATAAATTTGTCTAAAAAATAATCTCTCGATCATTTGCCAAAGCTGTAGCCG</gDNA_template>
            <first_frame> R   : D  V  C  Q  S  V  L  *  K  S  E  I  T  G  C  N  K  F  F  R  N  M  K  *  L  R  F  I  E  P  V  S  K  M  N  I  N  L  F  V  K  N  N  *  I  C  K  N  L  P  E  S  G  I  L  F  F  I  L  K  E  N  Q  V  H  *  I  H  S  V  P  L  R  K  L  F  P  S  S  I  R  G  F  I  W  N  I  T  S  Q  G  K  M  I  L  I  S  R  V  *  I  P  K  T  L  L  S  A  N  Q  A  T  A  G  K  Y  T  K  K  Y  V  F  R  R  R  R  K  I  R  K  F  V  I  K  Y  S  E  D  *  M  V  F  I  G  K  K  N  I  F  *  K  V  A  T  L  S  E  L  T  R  P  L  M  K  G  C  K  L  S  N  G  I  D  C  S  *  K  L  Q  P  F  R  T  V  M  A  G  I  L  N  I  T  E  I  K  R  V  T  C  A  D  S  S  R  V  G  L  T  K  K  L  K  T  F  R  L  T  S  V  I  K  *  L  I  E  N  N  F  F  V  H  L  I  N  *  I  N  K  *  N  K  F  V  *  K  I  I  S  R  S  F  A  K  A  V  A  </first_frame>
            <second_frame>  E  :  M  F  A  N  L  C  Y  E  N  Q  K  L  L  V  V  I  N  F  S  E  T  *  N  N  *  D  L  *  N  Q  *  V  R  *  T  *  I  Y  L  *  K  I  I  E  S  V  K  T  Y  Q  N  L  E  Y  S  F  L  S  *  K  K  I  K  S  T  E  F  T  V  S  P  *  G  N  Y  S  P  L  V  S  E  V  L  F  G  I  *  P  P  R  V  K  *  S  *  S  V  E  C  R  Y  Q  K  L  Y  C  Q  R  I  K  P  Q  Q  E  S  T  R  R  N  M  C  L  E  E  E  G  R  S  E  N  S  *  *  N  I  L  K  T  E  W  Y  L  *  A  R  R  I  Y  S  E  R  L  Q  P  F  Q  N  *  H  D  H  *  *  K  V  A  N  F  Q  M  V  L  T  V  P  E  S  C  N  L  S  E  Q  S  W  R  E  F  *  I  *  R  K  L  N  G  S  R  A  R  I  R  V  G  S  D  *  L  K  S  *  K  H  F  G  *  L  L  L  *  N  N  *  L  K  I  I  F  L  S  I  *  L  I  K  *  I  N  K  I  N  L  S  K  K  *  S  L  D  H  L  P  K  L  *  P </second_frame>
            <third_frame>   R :   C  L  P  I  C  V  M  K  I  R  N  Y  W  L  *  *  I  F  Q  K  H  E  I  T  E  I  Y  R  T  S  K  *  D  E  H  K  F  I  C  K  K  *  L  N  L  *  K  L  T  R  I  W  N  T  L  F  Y  L  E  R  K  S  S  P  L  N  S  Q  C  P  L  K  E  I  I  P  L  *  Y  P  R  F  Y  L  E  Y  N  L  P  G  *  N  D  L  N  Q  *  S  V  D  T  K  N  S  I  V  S  E  S  S  H  S  R  K  V  H  E  E  I  C  V  *  K  K  K  E  D  Q  K  I  R  N  K  I  F  *  R  L  N  G  I  Y  R  Q  E  E  Y  I  L  K  G  C  N  P  F  R  I  D  T  T  I  N  E  R  L  Q  T  F  K  W  Y  *  L  F  L  K  V  A  T  F  Q  N  S  H  G  G  N  F  K  Y  N  G  N  *  T  G  H  V  R  G  F  E  S  G  R  I  N  *  K  V  E  N  I  S  V  N  F  C  Y  K  I  I  N  *  K  *  F  F  C  P  F  N  *  L  N  K  *  I  K  *  I  C  L  K  N  N  L  S  I  I  C  Q  S  C  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12SLe0004H16.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="-" PGL_start="133436" PGL_stop="133081"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133436" e_stop="133081"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.938"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.938">
            <gDNA_exon_boundary e_start="133436" e_stop="133081" e_length="356"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133436" stop="133081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133436" stop="133109"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E242208" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTATTCTCCATGATCTGATTGCTGAAGATATGGTAGTAAATGAAGCTTTTCAAGTGGCTGCAATGATCGAGAAGTTGCCTCCTTCGTGGAACGATTTCAAGAATTATCTAAAGCATAAGCGTAAAGAAATGAAGCTTGAAGATCTTGTGATTCGTCTCAAGATTGAGGAAGATAACAAAAATGCCAAAAAAAAGTTGCGTAAGAGTTCAACAATCATTGGAGTTAATATTGCTGAAGATGATCCTACCAAAGACAAAAAGAAAAAAAAGTCCAACGGGTAGAAGTCAGAATAGGCCAAGAAGAAATTCAAAGGCAACTGTTATAATTGTGGCAAGGCTGGTCATAGGTCTTCTGA</gDNA_template>
            <first_frame> F  I  L  H  D  L  I  A  E  D  M  V  V  N  E  A  F  Q  V  A  A  M  I  E  K  L  P  P  S  W  N  D  F  K  N  Y  L  K  H  K  R  K  E  M  K  L  E  D  L  V  I  R  L  K  I  E  E  D  N  K  N  A  K  K  K  L  R  K  S  S  T  I  I  G  V  N  I  A  E  D  D  P  T  K  D  K  K  K  K  K  S  N  G  *  K  S  E  *  A  K  K  K  F  K  G  N  C  Y  N  C  G  K  A  G  H  R  S  S   </first_frame>
            <second_frame>  L  F  S  M  I  *  L  L  K  I  W  *  *  M  K  L  F  K  W  L  Q  *  S  R  S  C  L  L  R  G  T  I  S  R  I  I  *  S  I  S  V  K  K  *  S  L  K  I  L  *  F  V  S  R  L  R  K  I  T  K  M  P  K  K  S  C  V  R  V  Q  Q  S  L  E  L  I  L  L  K  M  I  L  P  K  T  K  R  K  K  S  P  T  G  R  S  Q  N  R  P  R  R  N  S  K  A  T  V  I  I  V  A  R  L  V  I  G  L  L  </second_frame>
            <third_frame>   Y  S  P  *  S  D  C  *  R  Y  G  S  K  *  S  F  S  S  G  C  N  D  R  E  V  A  S  F  V  E  R  F  Q  E  L  S  K  A  *  A  *  R  N  E  A  *  R  S  C  D  S  S  Q  D  *  G  R  *  Q  K  C  Q  K  K  V  A  *  E  F  N  N  H  W  S  *  Y  C  *  R  *  S  Y  Q  R  Q  K  E  K  K  V  Q  R  V  E  V  R  I  G  Q  E  E  I  Q  R  Q  L  L  *  L  W  Q  G  W  S  *  V  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133436" stop="133155"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FILHDLIAEDMVVNEAFQVAAMIEKLPPSWNDFKNYLKHKRKEMKLEDLVIRLKIEEDNKNAKKKLRKSSTIIGVNIAEDDPTKDKKKKKSNG*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12SLe0004H16.1" strand="-"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133285" stop="133082"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>204</number_coding_nucleotides>
                  <number_encoded_amino_acids>68</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FVSRLRKITKMPKKSCVRVQQSLELILLKMILPKTKRKKSPTGRSQNRPRRNSKATVIIVARLVIGLL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 411 chains have been computed
$ 
$ memory statistics:
$ 719960 bytes spliced alignments in total
$ 117 spliced alignments have been stored
$ 6153 bytes was the average size of a spliced alignment
$ 37992 bytes predicted gene locations in total
$ 25 predicted gene locations have been stored
$ 1519 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 469 backtrace matrices have been allocated
$ 
$ date finished: 2008-04-07 19:57:27
-->
