<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-04-10 00:12:29"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12HBa0221M09-FEXPV/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-B9x9In/sgn_marker_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-B9x9In/sgn_marker_seqs" ref_id="SGN-M166-F" ref_strand="+" ref_description="SGN-M166-F TG180-F [rflp_markers_forward]">
      <seq>tggttgaaaatctcagtggactaaggggtcattatacttctttacaggaacagctcacttcttcaagagtaagtctttgattagttgtttcttctgcttttgttattaaagttgcttgcatcaccagtgatactttcatgaactttaagcttcattcaggaacatttaaacacctttgaatgtttgttttgttcatttctgcaaactgtccagagtagtattgttttacaactcttttcagatttttgaatgatggtttatgaatattatagatgttttttctctcattttctgcttgatgatggtgttccatgcattctaatcgggtgattaatttaatgattttatttggggctttcatgatatgtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0221M09-FEXPV/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C12HBa0221M09.1" temp_strand="+" temp_description="C12HBa0221M09.1  AC216293.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0221M09 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="93794" stop="94763"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94094" g_stop="94463" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="370" r_length="370" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0221M09.1" gen_strand="+" ref_id="SGN-M166-F" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>370</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0221M09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M166-F" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94094" e_stop="94463"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTGAAAATCTCAGTGGACTAAGGGGTCATTATACTTCTTTACAGGAACAGCTCACTTCTTCAAGAGTAAGTCTTTGATTAGTTGTTTCTTCTGCTTTTGTTATTAAAGTTGCTTGCATCACCAGTGATACTTTCATGAACTTTAAGCTTCATTCAGGAACATTTAAACACCTTTGAATGTTTGTTTTGTTCATTTCTGCAAACTGTCCAGAGTAGTATTGTTTTACAACTCTTTTCAGATTTTTGAATGATGGTTTATGAATATTATAGATGTTTTTTCTCTCATTTTCTGCTTGATGATGGTGTTCCATGCATTCTAATCGGGTGATTAATTTAATGATTTTATTTGGGGTTTTCATGATATGTAA</genome_strand>
        <mrna_strand>TGGTTGAAAATCTCAGTGGACTAAGGGGTCATTATACTTCTTTACAGGAACAGCTCACTTCTTCAAGAGTAAGTCTTTGATTAGTTGTTTCTTCTGCTTTTGTTATTAAAGTTGCTTGCATCACCAGTGATACTTTCATGAACTTTAAGCTTCATTCAGGAACATTTAAACACCTTTGAATGTTTGTTTTGTTCATTTCTGCAAACTGTCCAGAGTAGTATTGTTTTACAACTCTTTTCAGATTTTTGAATGATGGTTTATGAATATTATAGATGTTTTTTCTCTCATTTTCTGCTTGATGATGGTGTTCCATGCATTCTAATCGGGTGATTAATTTAATGATTTTATTTGGGGCTTTCATGATATGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-B9x9In/sgn_marker_seqs" ref_id="SGN-M166-R" ref_strand="+" ref_description="SGN-M166-R TG180-R [rflp_markers_reverse]">
      <seq>aaaactctaatgttgcctttcaattcctgcattggcagaagattcagaatgaacatctaaatttttaatccaaaagtcaatttaaggtagattcacattagtgatcataaagtaccagaatagtattgtgcagttttttacgcagtttctctccttcaacaattttagtttcggcataagcaagacggctctgcaagtcgaaaataacattcttctgctcttcatattcttcttttgtcctcacagcagacatgtcggacatctaacaaagtgattaaacatttgaaatatttgagaaatatatcttctaaaagctcgttggatattacacggtaaattcaaacaaacaagggtcatagaaatgctgtcacctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0221M09-FEXPV/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C12HBa0221M09.1" temp_strand="-" temp_description="C12HBa0221M09.1  AC216293.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0221M09 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="95644" stop="94670"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="95344" g_stop="94970" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="375" r_length="375" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0221M09.1" gen_strand="-" ref_id="SGN-M166-R" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>375</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0221M09.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M166-R" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="95344" e_stop="94970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACTCTAATGTTGCCTTTCAATTCCTGCATTGGCAGAAGATTCAGAATGAACATCTAAATTTTTAATCCAAAAGTCAATTTAAGGTAGATTCACATTAGTGATCATAAAGTACCAGAATAGTATTGTGCAGTTTTTTACGCAGTTTCTCTCCTTCAACAATTTTAGTTTCGGCATAAGCAAGACGGTTCTGCAAGTCGAAAATAACATTCTTCTGCTCTTCATATTCTTCTTTTGTCCTCACAGCAGACATGTCGGACATCTAACAAAGTGATTAAACATTTGAAATATTTGAGAAATATATCTTCTAAAAGCTCGTTGGATATTACACGGTAAATTCAAACAAACAAGGGTCATAGAAATGCTGTCACCTCA</genome_strand>
        <mrna_strand>AAAACTCTAATGTTGCCTTTCAATTCCTGCATTGGCAGAAGATTCAGAATGAACATCTAAATTTTTAATCCAAAAGTCAATTTAAGGTAGATTCACATTAGTGATCATAAAGTACCAGAATAGTATTGTGCAGTTTTTTACGCAGTTTCTCTCCTTCAACAATTTTAGTTTCGGCATAAGCAAGACGGCTCTGCAAGTCGAAAATAACATTCTTCTGCTCTTCATATTCTTCTTTTGTCCTCACAGCAGACATGTCGGACATCTAACAAAGTGATTAAACATTTGAAATATTTGAGAAATATATCTTCTAAAAGCTCGTTGGATATTACACGGTAAATTCAAACAAACAAGGGTCATAGAAATGCTGTCACCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-B9x9In/sgn_marker_seqs" ref_id="SGN-M7819-2" ref_strand="+" ref_description="SGN-M7819-2 C2_At3g20680-2 [cosii_markers]">
      <seq>gaaacttctctacagccttatccagatgaacacatatttccataattgtacctattttcttagcaaaaactctgttccttttgacaagaattgacttcaaatggcttccaatcttgtaaaatttcgtccttcattccagttcaagctgaacaaacttcataacacaacaagttccttaagctttttaggatcaaaacaacaacttaacaatctttatcactctgttttcttcacaaaacccaagtcagatttttcacctcttcaatgttcactatcttctcctactccacctacaaccaaagaagatgccatttctcaagcaaaattctctctttcaactactttagagaaaccccttaacaatcccaaactcattgggaaaatcaagaaactcaaacaaccaagatttcgtgtcgaaattccagttgttgatgactccccatctgcatttgcccaacttgcttttgacatttttggagaaatgcccatcaaaagaaaatccccaaaaatcaagattctacttttatggcctaaccaaaccttaacccaagctgcacaaacagaatttgagaagaagaaatcttccaaccccattattgaaaatttagatatttcatcaagaattgaaatttctgctgatgtggtagtgtttatggctccagaggcttcaagattgactgcaatgaaggagattctgatacattgtacccaaagcctgtggtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0221M09-FEXPV/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C12HBa0221M09.1" temp_strand="+" temp_description="C12HBa0221M09.1  AC216293.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0221M09 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="99240" stop="100554"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99540" g_stop="100254" g_length="715"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0221M09.1" gen_strand="+" ref_id="SGN-M7819-2" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0221M09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7819-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99540" e_stop="100254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTTCTCTATAGCCTTATCCAGATGAACACATGTGTTCCCAAAATTGCAAGTATTTTCTTTGCAAAAACTCTATTCCCTTGGACAAGAATTGACTTCAAATGGCTTCTAATCTTGTAAAATTTCATTCTTCATTCCAGTTCAAGCTG----------A-A-CACAACAAGTTCCTTAAGTTTTTTAGGATCAAAACAACAACTTAACAATCTTTATCACTCTATTTTCTTCACAAAACCCAAGTCAGATTTTTCACCTCTTCAATGTTCACTATCTTCTCCTACTCCACCTATAACTAAAGAAGATGCCGTTTCTCAAGCAAAATTCTCTCTGTCAACTACTTTAGAGAAACCCCTTAACAATCCCAAACTCATAGGGAAAATCAAGAAACTCAAACAACCAAGATTTCGTGTCGAAATTCCAGTTGTTGATGACTCCCCATCTGCATTAGCCCAACTTGCTTTTGACATTTTTGGAGAAATGCCCATCAAAAGAAAAGCCCCAAACATCAAGATTCTACTTTTATGGCCTAACCAAACCTTAACCCAAGCTGCACAAGCAGAATTTGAAAAGAAGAAATCTTCAAACCCCATCATTGAAAATTTAGATATTTCATCAAGAATTGAAATTTCTGCTGATGTGGTAGTGTTTATGGCTCCAGAGGCTTCAATATTGACTGTAATGAAGGAGATTTCTGATACATTGTACCCAATGCCTGTCGTGA</genome_strand>
        <mrna_strand>GAAACTTCTCTACAGCCTTATCCAGATGAACACATAT-TT-CCATAATTGTACCTATTTTCTTAGCAAAAACTCTGTTCCTTTTGACAAGAATTGACTTCAAATGGCTTCCAATCTTGTAAAATTTCGTCCTTCATTCCAGTTCAAGCTGAACAAACTTCATAACACAACAAGTTCCTTAAGCTTTTTAGGATCAAAACAACAACTTAACAATCTTTATCACTCTGTTTTCTTCACAAAACCCAAGTCAGATTTTTCACCTCTTCAATGTTCACTATCTTCTCCTACTCCACCTACAACCAAAGAAGATGCCATTTCTCAAGCAAAATTCTCTCTTTCAACTACTTTAGAGAAACCCCTTAACAATCCCAAACTCATTGGGAAAATCAAGAAACTCAAACAACCAAGATTTCGTGTCGAAATTCCAGTTGTTGATGACTCCCCATCTGCATTTGCCCAACTTGCTTTTGACATTTTTGGAGAAATGCCCATCAAAAGAAAATCCCCAAAAATCAAGATTCTACTTTTATGGCCTAACCAAACCTTAACCCAAGCTGCACAAACAGAATTTGAGAAGAAGAAATCTTCCAACCCCATTATTGAAAATTTAGATATTTCATCAAGAATTGAAATTTCTGCTGATGTGGTAGTGTTTATGGCTCCAGAGGCTTCAAGATTGACTGCAATGAAGGAGA-TTCTGATACATTGTACCCAAAGCCTGTGGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-B9x9In/sgn_marker_seqs" ref_id="SGN-M7819" ref_strand="+" ref_description="SGN-M7819 C2_At3g20680 [cosii_markers]">
      <seq>aaaattgcaagtattttctttgcaaaaactctattcccttggacaagaattgacttcaaatggcttctaatcttgtaaaatttcattcttcattccagttcaagctgaacacaacaagttccttaagttttttaggatcaaaacaacaacttaacaatctttatcactctattttcttcacaaaacccaagtcagatttttcacctcttcaatgttcactatcttctcctactccacctataactaaagaagatgccgtttctcaagcaaaattctctctgtcaactactttagagaaaccccttaacaatcccaaactcatagggaaaatcaagaaactcaaacaaccaagatttcgtgtcgaaattccagttgttgatgactccccatctgcattagcccaacttgcttttgacatttttggagaaatgcccatcaaaagaaaagccccaaacatcaagattctacttttatggcctaaccaaaccttaacccaagctgcacaagcagaatttgaaaagaagaaatcttcaaaccccatcattgaaaatttagatatttcatcaagaattgaaatttctgctgatgtggtagtgtttatggctccagaggcttcaatattgactgtaatgaaggagatttctgatacattgtacccaatgcctgtcgtgatttttaatcctaaatggggttttgatgaagagagtagttttggtgagttgagtggatttgtaggttcatttgaggttgtgtattcatttatgggattggaagttagagggatattgagtaatagaaaaggggtgatgtttaaatgtgttaaagatggtgttttgagtggtgagaaatggtatgtgttcgtcgaagaagatggagagttgaaagtggtttcaaggtttaaagcaaggccatcaattgttgaagttgagaatgttttgtataacttgatggccgtgaattcgccaatcacgaaatcagctaagttcttgaaagatttggtgtcaaatgttagggggaaaaagtaaagcacaagcaattcaaggtattacaactcacatcatttcaactttaggatagctatcctttgcaatgatattattgttttttcgagattttgttcttcctagaacagttacagtatgaagtccatgtactagctttgccaggttcaaaactttaacatggaagaacaaataataacctattggctgcatgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0221M09-FEXPV/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C12HBa0221M09.1" temp_strand="+" temp_description="C12HBa0221M09.1  AC216293.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0221M09 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="99283" stop="101103"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99583" g_stop="100808" g_length="1226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1226" r_length="1226" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0221M09.1" gen_strand="+" ref_id="SGN-M7819" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1226</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0221M09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7819" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99583" e_stop="100808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTGCAAGTATTTTCTTTGCAAAAACTCTATTCCCTTGGACAAGAATTGACTTCAAATGGCTTCTAATCTTGTAAAATTTCATTCTTCATTCCAGTTCAAGCTGAACACAACAAGTTCCTTAAGTTTTTTAGGATCAAAACAACAACTTAACAATCTTTATCACTCTATTTTCTTCACAAAACCCAAGTCAGATTTTTCACCTCTTCAATGTTCACTATCTTCTCCTACTCCACCTATAACTAAAGAAGATGCCGTTTCTCAAGCAAAATTCTCTCTGTCAACTACTTTAGAGAAACCCCTTAACAATCCCAAACTCATAGGGAAAATCAAGAAACTCAAACAACCAAGATTTCGTGTCGAAATTCCAGTTGTTGATGACTCCCCATCTGCATTAGCCCAACTTGCTTTTGACATTTTTGGAGAAATGCCCATCAAAAGAAAAGCCCCAAACATCAAGATTCTACTTTTATGGCCTAACCAAACCTTAACCCAAGCTGCACAAGCAGAATTTGAAAAGAAGAAATCTTCAAACCCCATCATTGAAAATTTAGATATTTCATCAAGAATTGAAATTTCTGCTGATGTGGTAGTGTTTATGGCTCCAGAGGCTTCAATATTGACTGTAATGAAGGAGATTTCTGATACATTGTACCCAATGCCTGTCGTGATTTTTAATCCTAAATGGGGTTTTGATGAAGAGAGTAGTTTTGGTGAGTTGAGTGGATTTGTAGGTTCATTTGAGGTTGTGTATTCATTTATGGGATTGGAAGTTAGAGGGATATTGAGTAATAGAAAAGGGGTGATGTTTAAATGTGTTAAAGATGGTGTTTTGAGTGGTGAGAAATGGTATGTGTTCGTCGAAGAAGATGGAGAGTTGAAAGTGGTTTCAAGGTTTAAAGCAAGGCCATCAATTGTTGAAGTTGAGAATGTTTTGTATAACTTGATGGCCGTGAATTCGCCAATCACGAAATCAGCTAAGTTCTTGAAAGATTTGGTGTCAAATGTTAGGGGGAAAAAGTAAAGCACAAGCAATTCAAGGTATTACAACTCACATCATTTCAACTTTAGGATAGCTATCCTTTGCAATGATATTATTGTTTTTTCGAGATTTTGTTCTTCCTAGAACAGTTACAGTATGAAGTCCATGTACTAGCTTTGCCAGGTTCAAAACTTTAACATGGAAGAACAAATAATAACCTATTGGCTGCATGAACTAAGCATC</genome_strand>
        <mrna_strand>AAAATTGCAAGTATTTTCTTTGCAAAAACTCTATTCCCTTGGACAAGAATTGACTTCAAATGGCTTCTAATCTTGTAAAATTTCATTCTTCATTCCAGTTCAAGCTGAACACAACAAGTTCCTTAAGTTTTTTAGGATCAAAACAACAACTTAACAATCTTTATCACTCTATTTTCTTCACAAAACCCAAGTCAGATTTTTCACCTCTTCAATGTTCACTATCTTCTCCTACTCCACCTATAACTAAAGAAGATGCCGTTTCTCAAGCAAAATTCTCTCTGTCAACTACTTTAGAGAAACCCCTTAACAATCCCAAACTCATAGGGAAAATCAAGAAACTCAAACAACCAAGATTTCGTGTCGAAATTCCAGTTGTTGATGACTCCCCATCTGCATTAGCCCAACTTGCTTTTGACATTTTTGGAGAAATGCCCATCAAAAGAAAAGCCCCAAACATCAAGATTCTACTTTTATGGCCTAACCAAACCTTAACCCAAGCTGCACAAGCAGAATTTGAAAAGAAGAAATCTTCAAACCCCATCATTGAAAATTTAGATATTTCATCAAGAATTGAAATTTCTGCTGATGTGGTAGTGTTTATGGCTCCAGAGGCTTCAATATTGACTGTAATGAAGGAGATTTCTGATACATTGTACCCAATGCCTGTCGTGATTTTTAATCCTAAATGGGGTTTTGATGAAGAGAGTAGTTTTGGTGAGTTGAGTGGATTTGTAGGTTCATTTGAGGTTGTGTATTCATTTATGGGATTGGAAGTTAGAGGGATATTGAGTAATAGAAAAGGGGTGATGTTTAAATGTGTTAAAGATGGTGTTTTGAGTGGTGAGAAATGGTATGTGTTCGTCGAAGAAGATGGAGAGTTGAAAGTGGTTTCAAGGTTTAAAGCAAGGCCATCAATTGTTGAAGTTGAGAATGTTTTGTATAACTTGATGGCCGTGAATTCGCCAATCACGAAATCAGCTAAGTTCTTGAAAGATTTGGTGTCAAATGTTAGGGGGAAAAAGTAAAGCACAAGCAATTCAAGGTATTACAACTCACATCATTTCAACTTTAGGATAGCTATCCTTTGCAATGATATTATTGTTTTTTCGAGATTTTGTTCTTCCTAGAACAGTTACAGTATGAAGTCCATGTACTAGCTTTGCCAGGTTCAAAACTTTAACATGGAAGAACAAATAATAACCTATTGGCTGCATGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-B9x9In/sgn_marker_seqs" ref_id="SGN-M7942" ref_strand="+" ref_description="SGN-M7942 C2_At3g47860 [cosii_markers]">
      <seq>aaaagtgttttaataattggcttacagctgatgtgaagtaagaacacaatggtttgctacaatttggtggcccaacaatcacctccaattttggttcaatcacaatatccgtcaaaacccagggggttgtctgtgaaagtggtgtcttcctgctgcactgaatgtccaatatttggtaaggttgaggttaaacatgtcatttctggtcttgcggcatcaatcctatttctctctcaaagtagcatggcttttgcagcagacctccctcattacaacagtgtatttcaacttgcaaatgtcgcggacagcatgccaacacttcctttggagaagggaaatgatggtggaaagctgatgatgatgcgaggcatgacagcgaaagactttgatccaatcaggtattctggaagatggttcgaagtagcttcccttaaacgtggatttgctggacaaggtcaagaagattgtcattgcacacagggcatttacactgttgatatgaatgcacctgctatccaagtagacacattttgcgttcatggaggacctgatggctacatcacaggcataaggggaagggttcaatgccttaatgaggaggataaggagaaagacgagactgatctagaaaggcaagaaatgattagggagaagtgttaccttaggtttcctacactgccgttcatccctaaggagccttatgatgtaattgcaactgattatgataacttcgcactggtttctggagctaaagataaaagcttcgttcagatatactcgaggacgcctaatccaggaccagaatttatcgacaggtacaagaactacttagcaagtttcggatatgatccaagcaaaatcaatgacactccacaagactgtgaggtaaagactaccagtcagctatcagcaatgatgtccatgtccggaatgcaacaagctctaaacaaccaatttcctgatttagagttgagacgccctgttcaattcaacccattcacaagcgttttcgaaactctcaagaaacttgctgaactatatttcaagtagtaaatccacttgatatattacttgtatagtgcatagttcttatgactagtggctgtaacacattgaactaaagttcaactatgaatgacatacactccagaaaaatttgtgtgttactattgggaaaatggtacacatatgtgaatgacatgcttatatatggtatgagttttaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0221M09-FEXPV/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C12HBa0221M09.1" temp_strand="+" temp_description="C12HBa0221M09.1  AC216293.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0221M09 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="127550" stop="132053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127850" g_stop="127971" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127972" i_stop="129362" i_length="1391">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129363" g_stop="129486" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="246" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129487" i_stop="129700" i_length="214">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="129701" g_stop="129934" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="480" r_length="234" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="129935" i_stop="130080" i_length="146">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130081" g_stop="130371" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="771" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="130372" i_stop="131298" i_length="927">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131299" g_stop="131755" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="772" r_stop="1228" r_length="457" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0221M09.1" gen_strand="+" ref_id="SGN-M7942" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1228</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0221M09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7942" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="127850" e_stop="127971"/>
          <exon e_start="129363" e_stop="129486"/>
          <exon e_start="129701" e_stop="129934"/>
          <exon e_start="130081" e_stop="130371"/>
          <exon e_start="131299" e_stop="131755"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTGTTTTAATAATTGGCTTACAGCTGATGTGAAGTAAGAACACAATGGTTTGCTACAATTTGGTGGCCCAACAATCACCTCCAATTTTGGTTCAATCACAATATCCGTCAAAACCCAGGTATAATCTCACTCTTTTTTTTTTGCTTATATTCTCAAATCTCAACAATTATATTCTCTAAATTGTACTGCTGTGATCTGTTAAAAATAGTACCCTTTATGGTTGTGATTGTTCAGAATTAAATAAAAATTGTACTAAAACCAGACCAATGAAAATGAAAGCTGCAATTCCAAATCTTTAAGCTAAAATGCCATAACCAAGGGAAGAATGTCAGATTTTAGTGAGTCAGTTTGAACTTTTTTATTTAGGTTTACAATAATTAATAGTCTTTTTGACCAAGTATATAAAATGTTCTTGTTTGGAGAAGTGCTTTCCCAAAAAAAGTATAGCAATTTGTGTTTGATTAATCAGTTTTGCTTGATGTTTGAATAGTTGTTTGTGTAAGCTACTACTCAAACACTTATTTTTGCCTAAAGTCGATATCAAATACCTAACTTTGATAAAATAAGCACTTTTAGCTACCCATATAAGCCTCAGTCTCAACCAAGTTGGAGTCGATTATATAAATCCCAAACCTGATCATGTTTCTCCATTTAAACTCTGATACTAAACAACAACCTTTTATTTTTATTAGTTTCTCAAAGTATAAATTTTGTTGTTTCTTTTGATACCATTTTGTGGACATCGGGATGCATACGAAATGAGTGAATAGCTCATCTGCTAATCAATGTTAATACTTGGAAAAATGCATATTCTTCTTAACGAACAATCTAAGTCTTCCTATATCAGCCACTTTCTAAGTAAATATTATTTGTCCATTTAGTCAATCCCATTATCTGATTGGCTAACTAGTAAGGATGACACGAGAATGGCCATTAGATTACATTCTCAAATCTCAAGTGTATTAATAGCAATAATTTATCATAATGAGGTCTTCTTAGAGTCAAAAGGAATATTGAAAGTTGCTTGATCATCATACAAGTACCCATGGTCATGTGCCTACTGGTCAATGAAGTGGGTTGAGAACCATGAGGTCTCAAGTTCAAATTCATCTTAGACAAATATACTAGCTGATTCTTCCCTAGTGGAAAGAGCTATCCGGTACCTGTCCTGGTGGAGGAGTAGGTACCCGTGGAAATTAGTCCTATTTCAGTACACGAAAATTCCTCCTTTAATTGGAATTACACCTCTGAATAGGAAGTACATCCAATAGGATATTTCCTTGTCTGATACCTTTTGGTGTGTTTGAGGTGTAGTCTGACAAAAGACATTGCTTGTTTACTTTTCTTTCCTGCAGCAATAGATAACCTAAACTGTCCAAGCAGTGTAATGCATCCAGCTTAGTTTTACGTATTATATTTTATGTGGCTGATGTTTTCTCAAAGATTCTTTTTTCCTTCCAAAACATTCCCATTCTTCATGTAATGAGGATTTTTCGTCGGTCCTTGTAGGGGGTTGTCTGTGAAAGTGGTGTCTTCCTGCTGCACTGAATGTCCAATATTTGGTAAGGTTGAGGTTAAACATGTCATTTCTGGTCTTGCGGCATCAATCCTATTTCTCTCTCAAAGTAGCATGGTTAGTATCCTTACTATATTTTCTCTCCTAATTCCAGAGGCAAAAGTGGTACTGCACATATGTATTTGGTTGATTTGATAGAATAGTTGTGAAAGCTGAAGGTCCGGAATGATGCTTTCATGACTTTTGGGAATGCATTCTGTACGAATTAACTTAAAGAAAAAATTTCAGAAATTTTGTTAAACTTTCAAGCGTATCTTCTTTCTATTGGTAGGCTTTTGCAGCAGACCTCCCTCATTACAACAGTGTATTTCAACTTGCAAATGTCGCGGACAGCATGCCAACACTTCCTTTGGAGAAGGGAAATGATGGTGGAAAGCTGATGATGATGCGAGGCATGACAGCGAAAGACTTTGATCCAATCAGGTATTCTGGAAGATGGTTCGAAGTAGCTTCCCTTAAACGTGGATTTGCTGGACAAGGTCAAGAAGATTGTCATTGCACACAGGTTGAATGTTGAGAATGTTAACACCTGAAAAATCACGCCTTCTGTTTTCTGTCTTTTGAAGATATTTTGGGTTACTTGACTCTCGGACACATATACTTGAAGATGTCTTTTTTGGCATAATCTGTCTTTATTCCAAATTATTTCAGGGCATTTACACTGTTGATATGAATGCACCTGCTATCCAAGTAGACACATTTTGCGTTCATGGAGGACCTGATGGCTACATCACAGGCATAAGGGGAAGGGTTCAATGCCTTAATGAGGAGGATAAGGAGAAAGACGAGACTGATCTAGAAAGGCAAGAAATGATTAGGGAGAAGTGTTACCTTAGGTTTCCTACACTGCCGTTCATCCCTAAGGAGCCTTATGATGTAATTGCAACTGATTATGATAACTTCGCACTGGTTTCTGGAGCTAAAGATAAAAGCTTCGTTCAGGTAATTAATTCTTTCAGTTTAAACCAGTGTGACTTTTAGTACTGTACAAAATGTGGGTGGGTTTCTTACATATCAAATGTTTATTGCTGTCACACCTTTAAATTAATGAAATATCCCAACTAAGCAATACCATAATAGGGAGCTGTTAAAGAAGTCCCACATCCGTCAATTATGGGATACATGGTCTCTTTATATGGCCCGGGCAATCCTCACCTCTTGAGCTAGTTTTTGTCGTTGAGTTAGGCTCGAGATCCATTTCTTTACTTGAGCAAATTAGAAAAAAAAACTTTTCCTTTGTACGAAGGCATGGATACAGACACTCCCCTCAGACCTAATATCGGGTCCATTTTCTAAGTATCAAGACTTAGTATGTGAGGATGTTTTAGATAGCATTAGCATAGCCTACAGCTTAAGTAAAAGGGGTACATTGTAGATACATTTTGTAATTACGGATATATGATGTGAACTAGGATTGTTGAATACTTTTGTTGATGTTAGTGCTTGCAGGAGCGGATCTAGTGTACTGTTCATATATGGGTTCATCCAAACCCAGTAGATTTGGCTCGTACCCTGTATATATGTTAAGATGTGCACTAAATAAGTACAGATGATAGATATCAGATCCAACAAATCAAATATTTATGGTATGATCCCAAACTCGAACCTGTAATGTTCAAATCCTGGTTCCGCCTTTGAGTGTTTGAATGTCTAGTATTGTTGTAAGAATGCTGGAAGAGGCATTTGTGATTATAAAAGAAACTTGGCATGATATAGGTTATAACACAGCATAAATCTATATCTAATTCACTTGAACATTACACAAGAAGAAACATCAATTACAACTCTCAAAATTGCTGGAATTTACTTATAGTACATGATTTATCCGACTGACTAACTGATTATGCCTTTTTTCTCTCCTCAAATCAGATATACTCGAGGACGCCTAATCCAGGACCAGAATTTATCGACAGGTACAAGAACTACTTAGCAAGTTTCGGATATGATCCAAGCAAAATCAATGACACTCCACAAGACTGTGAGGTAAAGACTACCAGTCAGCTATCAGCAATGATGTCCATGTCCGGAATGCAACAAGCTCTAAACAACCAATTTCCTGATTTAGAGTTGAGACGCCCTGTTCAATTCAACCCATTCACAAGCGTTTTCGAAACTCTCAAGAAACTTGCTGAACTATATTTCAAGTAGTAAATCCACTTGATATATTACTTGTATAGTGCATAGTTCTTATGACTAGTGGCTGTAACACATTGAACTAAAGTTCAACTATGAATGACATACACTCCAGAAAAATTTGTGTGTTACTATTGGGAAAATGGTAGACATATGTGAATGACATGCTTATATTTGGTATGAGTTTAAAATA</genome_strand>
        <mrna_strand>AAAAGTGTTTTAATAATTGGCTTACAGCTGATGTGAAGTAAGAACACAATGGTTTGCTACAATTTGGTGGCCCAACAATCACCTCCAATTTTGGTTCAATCACAATATCCGTCAAAACCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGTTGTCTGTGAAAGTGGTGTCTTCCTGCTGCACTGAATGTCCAATATTTGGTAAGGTTGAGGTTAAACATGTCATTTCTGGTCTTGCGGCATCAATCCTATTTCTCTCTCAAAGTAGCATG......................................................................................................................................................................................................................GCTTTTGCAGCAGACCTCCCTCATTACAACAGTGTATTTCAACTTGCAAATGTCGCGGACAGCATGCCAACACTTCCTTTGGAGAAGGGAAATGATGGTGGAAAGCTGATGATGATGCGAGGCATGACAGCGAAAGACTTTGATCCAATCAGGTATTCTGGAAGATGGTTCGAAGTAGCTTCCCTTAAACGTGGATTTGCTGGACAAGGTCAAGAAGATTGTCATTGCACACAG..................................................................................................................................................GGCATTTACACTGTTGATATGAATGCACCTGCTATCCAAGTAGACACATTTTGCGTTCATGGAGGACCTGATGGCTACATCACAGGCATAAGGGGAAGGGTTCAATGCCTTAATGAGGAGGATAAGGAGAAAGACGAGACTGATCTAGAAAGGCAAGAAATGATTAGGGAGAAGTGTTACCTTAGGTTTCCTACACTGCCGTTCATCCCTAAGGAGCCTTATGATGTAATTGCAACTGATTATGATAACTTCGCACTGGTTTCTGGAGCTAAAGATAAAAGCTTCGTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACTCGAGGACGCCTAATCCAGGACCAGAATTTATCGACAGGTACAAGAACTACTTAGCAAGTTTCGGATATGATCCAAGCAAAATCAATGACACTCCACAAGACTGTGAGGTAAAGACTACCAGTCAGCTATCAGCAATGATGTCCATGTCCGGAATGCAACAAGCTCTAAACAACCAATTTCCTGATTTAGAGTTGAGACGCCCTGTTCAATTCAACCCATTCACAAGCGTTTTCGAAACTCTCAAGAAACTTGCTGAACTATATTTCAAGTAGTAAATCCACTTGATATATTACTTGTATAGTGCATAGTTCTTATGACTAGTGGCTGTAACACATTGAACTAAAGTTCAACTATGAATGACATACACTCCAGAAAAATTTGTGTGTTACTATTGGGAAAATGGTACACATATGTGAATGACATGCTTATATATGGTATGAGTTTTAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-B9x9In/sgn_marker_seqs" ref_id="SGN-M7942-2" ref_strand="+" ref_description="SGN-M7942-2 C2_At3g47860-2 [cosii_markers]">
      <seq>acaagtgttttaataattggcttacagctcaagtgaagttgctgaataatcaagaacacaatgttttgctataatttagtggcccaacaatcacctccaattttggttcaatcacaatatccatcaaaacccagggggttgcctgtgaaagtggtgtctgcctgctgcactgaatgtcctatatttcgtaaggttgaggttaaacatgtcatttcaggtcttgcgacatcaatcctatgtctctctccaagtaacatggcttttgcagcagaccttcctcattacaacagtgtgttccaacttgcaaatgtcgcggacagcatgccaacacttcctttggagaaggaaaatgatggtggaaagctgatgatgatgcgaggcatgacagcgaaagactttgatccaatcaggtattctggaagatggttcgaagtagcttcccttaaacgtggatttgctggacaaggtcaagaagattgccactgcacacagggcatttacactgttgatatgaatgcacctgctatccaagtagacacattttgcgttcatggaggacccgatggctacattacaggcataagaggaagggttcaatgccttaatgaggaggataaggagaaagatgagactgatctagaaaggcaagaaatgattagggaaaagtgttaccttaggtttcctacactgccgttcatccccaaggagccttatgatgtgattgcaactgattatgataacttcgcactggtttctggagctaaagataaaagcttcgttcagatatactcgaggacgcctaatccaggaccagaatttattgagaagtacaaaaactacttggctagtttcggatatgatccgagcaaaatcaaagacactccacaagactgtgaggtaaagactaccagtcagctatcagcaatgatgtccatgtccggaatgcaacaagctctaaacaaccaatttcctgatttagagttgagacgccctgttcaattcaacccattcacaagcgttttcgaaactctcaagaaacttgctgagctttatttcaagtagtgaatccacttgaattttatgacagatatatatgtattacttgtatagtgctagttcttatgactagtgggtgtaacacattgaactaaagttcaattatgaatgacatacactccagaaaaatatatatgtatgtgtatgttacaattggatatttggaaggaaaattgcccttaatattctaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0221M09-FEXPV/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C12HBa0221M09.1" temp_strand="+" temp_description="C12HBa0221M09.1  AC216293.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0221M09 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="127552" stop="132010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="127877" g_stop="127971" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="134" r_length="93" r_score="0.905"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="127972" i_stop="129362" i_length="1391">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.945" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="129363" g_stop="129486" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="258" r_length="124" r_score="0.927"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="129487" i_stop="129700" i_length="214">
            <donor d_prob="0.991" d_score="0.90"/>
            <acceptor a_prob="0.993" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="129701" g_stop="129934" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="492" r_length="234" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="129935" i_stop="130080" i_length="146">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="130081" g_stop="130371" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="783" r_length="291" r_score="0.976"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="130372" i_stop="131298" i_length="927">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="131299" g_stop="131685" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="784" r_stop="1188" r_length="405" r_score="0.863"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0221M09.1" gen_strand="+" ref_id="SGN-M7942-2" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>1131</cumulative_length_of_scored_exons>
        <coverage percentage="0.905" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0221M09.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-M7942-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="127877" e_stop="127971"/>
          <exon e_start="129363" e_stop="129486"/>
          <exon e_start="129701" e_stop="129934"/>
          <exon e_start="130081" e_stop="130371"/>
          <exon e_start="131299" e_stop="131685"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGATGTGAAGTAAGAACACAATGGTTTGCTACAATTTGGTGGCCCAACAATCACCTCCAATTTTGGTTCAATCACAATATCCGTCAAAACCCAGGTATAATCTCACTCTTTTTTTTTTGCTTATATTCTCAAATCTCAACAATTATATTCTCTAAATTGTACTGCTGTGATCTGTTAAAAATAGTACCCTTTATGGTTGTGATTGTTCAGAATTAAATAAAAATTGTACTAAAACCAGACCAATGAAAATGAAAGCTGCAATTCCAAATCTTTAAGCTAAAATGCCATAACCAAGGGAAGAATGTCAGATTTTAGTGAGTCAGTTTGAACTTTTTTATTTAGGTTTACAATAATTAATAGTCTTTTTGACCAAGTATATAAAATGTTCTTGTTTGGAGAAGTGCTTTCCCAAAAAAAGTATAGCAATTTGTGTTTGATTAATCAGTTTTGCTTGATGTTTGAATAGTTGTTTGTGTAAGCTACTACTCAAACACTTATTTTTGCCTAAAGTCGATATCAAATACCTAACTTTGATAAAATAAGCACTTTTAGCTACCCATATAAGCCTCAGTCTCAACCAAGTTGGAGTCGATTATATAAATCCCAAACCTGATCATGTTTCTCCATTTAAACTCTGATACTAAACAACAACCTTTTATTTTTATTAGTTTCTCAAAGTATAAATTTTGTTGTTTCTTTTGATACCATTTTGTGGACATCGGGATGCATACGAAATGAGTGAATAGCTCATCTGCTAATCAATGTTAATACTTGGAAAAATGCATATTCTTCTTAACGAACAATCTAAGTCTTCCTATATCAGCCACTTTCTAAGTAAATATTATTTGTCCATTTAGTCAATCCCATTATCTGATTGGCTAACTAGTAAGGATGACACGAGAATGGCCATTAGATTACATTCTCAAATCTCAAGTGTATTAATAGCAATAATTTATCATAATGAGGTCTTCTTAGAGTCAAAAGGAATATTGAAAGTTGCTTGATCATCATACAAGTACCCATGGTCATGTGCCTACTGGTCAATGAAGTGGGTTGAGAACCATGAGGTCTCAAGTTCAAATTCATCTTAGACAAATATACTAGCTGATTCTTCCCTAGTGGAAAGAGCTATCCGGTACCTGTCCTGGTGGAGGAGTAGGTACCCGTGGAAATTAGTCCTATTTCAGTACACGAAAATTCCTCCTTTAATTGGAATTACACCTCTGAATAGGAAGTACATCCAATAGGATATTTCCTTGTCTGATACCTTTTGGTGTGTTTGAGGTGTAGTCTGACAAAAGACATTGCTTGTTTACTTTTCTTTCCTGCAGCAATAGATAACCTAAACTGTCCAAGCAGTGTAATGCATCCAGCTTAGTTTTACGTATTATATTTTATGTGGCTGATGTTTTCTCAAAGATTCTTTTTTCCTTCCAAAACATTCCCATTCTTCATGTAATGAGGATTTTTCGTCGGTCCTTGTAGGGGGTTGTCTGTGAAAGTGGTGTCTTCCTGCTGCACTGAATGTCCAATATTTGGTAAGGTTGAGGTTAAACATGTCATTTCTGGTCTTGCGGCATCAATCCTATTTCTCTCTCAAAGTAGCATGGTTAGTATCCTTACTATATTTTCTCTCCTAATTCCAGAGGCAAAAGTGGTACTGCACATATGTATTTGGTTGATTTGATAGAATAGTTGTGAAAGCTGAAGGTCCGGAATGATGCTTTCATGACTTTTGGGAATGCATTCTGTACGAATTAACTTAAAGAAAAAATTTCAGAAATTTTGTTAAACTTTCAAGCGTATCTTCTTTCTATTGGTAGGCTTTTGCAGCAGACCTCCCTCATTACAACAGTGTATTTCAACTTGCAAATGTCGCGGACAGCATGCCAACACTTCCTTTGGAGAAGGGAAATGATGGTGGAAAGCTGATGATGATGCGAGGCATGACAGCGAAAGACTTTGATCCAATCAGGTATTCTGGAAGATGGTTCGAAGTAGCTTCCCTTAAACGTGGATTTGCTGGACAAGGTCAAGAAGATTGTCATTGCACACAGGTTGAATGTTGAGAATGTTAACACCTGAAAAATCACGCCTTCTGTTTTCTGTCTTTTGAAGATATTTTGGGTTACTTGACTCTCGGACACATATACTTGAAGATGTCTTTTTTGGCATAATCTGTCTTTATTCCAAATTATTTCAGGGCATTTACACTGTTGATATGAATGCACCTGCTATCCAAGTAGACACATTTTGCGTTCATGGAGGACCTGATGGCTACATCACAGGCATAAGGGGAAGGGTTCAATGCCTTAATGAGGAGGATAAGGAGAAAGACGAGACTGATCTAGAAAGGCAAGAAATGATTAGGGAGAAGTGTTACCTTAGGTTTCCTACACTGCCGTTCATCCCTAAGGAGCCTTATGATGTAATTGCAACTGATTATGATAACTTCGCACTGGTTTCTGGAGCTAAAGATAAAAGCTTCGTTCAGGTAATTAATTCTTTCAGTTTAAACCAGTGTGACTTTTAGTACTGTACAAAATGTGGGTGGGTTTCTTACATATCAAATGTTTATTGCTGTCACACCTTTAAATTAATGAAATATCCCAACTAAGCAATACCATAATAGGGAGCTGTTAAAGAAGTCCCACATCCGTCAATTATGGGATACATGGTCTCTTTATATGGCCCGGGCAATCCTCACCTCTTGAGCTAGTTTTTGTCGTTGAGTTAGGCTCGAGATCCATTTCTTTACTTGAGCAAATTAGAAAAAAAAACTTTTCCTTTGTACGAAGGCATGGATACAGACACTCCCCTCAGACCTAATATCGGGTCCATTTTCTAAGTATCAAGACTTAGTATGTGAGGATGTTTTAGATAGCATTAGCATAGCCTACAGCTTAAGTAAAAGGGGTACATTGTAGATACATTTTGTAATTACGGATATATGATGTGAACTAGGATTGTTGAATACTTTTGTTGATGTTAGTGCTTGCAGGAGCGGATCTAGTGTACTGTTCATATATGGGTTCATCCAAACCCAGTAGATTTGGCTCGTACCCTGTATATATGTTAAGATGTGCACTAAATAAGTACAGATGATAGATATCAGATCCAACAAATCAAATATTTATGGTATGATCCCAAACTCGAACCTGTAATGTTCAAATCCTGGTTCCGCCTTTGAGTGTTTGAATGTCTAGTATTGTTGTAAGAATGCTGGAAGAGGCATTTGTGATTATAAAAGAAACTTGGCATGATATAGGTTATAACACAGCATAAATCTATATCTAATTCACTTGAACATTACACAAGAAGAAACATCAATTACAACTCTCAAAATTGCTGGAATTTACTTATAGTACATGATTTATCCGACTGACTAACTGATTATGCCTTTTTTCTCTCCTCAAATCAGATATACTCGAGGACGCCTAATCCAGGACCAGAATTTATCGACAGGTACAAGAACTACTTAGCAAGTTTCGGATATGATCCAAGCAAAATCAATGACACTCCACAAGACTGTGAGGTAAAGACTACCAGTCAGCTATCAGCAATGATGTCCATGTCCGGAATGCAACAAGCTCTAAACAACCAATTTCCTGATTTAGAGTTGAGACGCCCTGTTCAATTCAACCCATTCACAAGCGTTTTCGAAACTCTCAAGAAACTTGCTGAACTATATTTCAAGTAGTAAATCCAC--------T-T----G----ATA--TATTACTTGTATAGTGCATAGTTCTTATGACTAGTGGCTGTAACACATTGAACTAAAGTTCAACTATGAATGACATACACTCCAGAAAAATTT</genome_strand>
        <mrna_strand>CTGA-AT-AATCAAGAACACAATGTTTTGCTATAATTTAGTGGCCCAACAATCACCTCCAATTTTGGTTCAATCACAATATCCATCAAAACCCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGTTGCCTGTGAAAGTGGTGTCTGCCTGCTGCACTGAATGTCCTATATTTCGTAAGGTTGAGGTTAAACATGTCATTTCAGGTCTTGCGACATCAATCCTATGTCTCTCTCCAAGTAACATG......................................................................................................................................................................................................................GCTTTTGCAGCAGACCTTCCTCATTACAACAGTGTGTTCCAACTTGCAAATGTCGCGGACAGCATGCCAACACTTCCTTTGGAGAAGGAAAATGATGGTGGAAAGCTGATGATGATGCGAGGCATGACAGCGAAAGACTTTGATCCAATCAGGTATTCTGGAAGATGGTTCGAAGTAGCTTCCCTTAAACGTGGATTTGCTGGACAAGGTCAAGAAGATTGCCACTGCACACAG..................................................................................................................................................GGCATTTACACTGTTGATATGAATGCACCTGCTATCCAAGTAGACACATTTTGCGTTCATGGAGGACCCGATGGCTACATTACAGGCATAAGAGGAAGGGTTCAATGCCTTAATGAGGAGGATAAGGAGAAAGATGAGACTGATCTAGAAAGGCAAGAAATGATTAGGGAAAAGTGTTACCTTAGGTTTCCTACACTGCCGTTCATCCCCAAGGAGCCTTATGATGTGATTGCAACTGATTATGATAACTTCGCACTGGTTTCTGGAGCTAAAGATAAAAGCTTCGTTCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATACTCGAGGACGCCTAATCCAGGACCAGAATTTATTGAGAAGTACAAAAACTACTTGGCTAGTTTCGGATATGATCCGAGCAAAATCAAAGACACTCCACAAGACTGTGAGGTAAAGACTACCAGTCAGCTATCAGCAATGATGTCCATGTCCGGAATGCAACAAGCTCTAAACAACCAATTTCCTGATTTAGAGTTGAGACGCCCTGTTCAATTCAACCCATTCACAAGCGTTTTCGAAACTCTCAAGAAACTTGCTGAGCTTTATTTCAAGTAGTGAATCCACTTGAATTTTATGACAGATATATATGTATTACTTGTATAGTGC-TAGTTCTTATGACTAGTGGGTGTAACACATTGAACTAAAGTTCAATTATGAATGACATACACTCCAGAAAAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>6</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="94094" PGL_stop="94463"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94094" e_stop="94463"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="94094" e_stop="94463" e_length="370"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94094" stop="94463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M166-F" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGTTGAAAATCTCAGTGGACTAAGGGGTCATTATACTTCTTTACAGGAACAGCTCACTTCTTCAAGAGTAAGTCTTTGATTAGTTGTTTCTTCTGCTTTTGTTATTAAAGTTGCTTGCATCACCAGTGATACTTTCATGAACTTTAAGCTTCATTCAGGAACATTTAAACACCTTTGAATGTTTGTTTTGTTCATTTCTGCAAACTGTCCAGAGTAGTATTGTTTTACAACTCTTTTCAGATTTTTGAATGATGGTTTATGAATATTATAGATGTTTTTTCTCTCATTTTCTGCTTGATGATGGTGTTCCATGCATTCTAATCGGGTGATTAATTTAATGATTTTATTTGGGGTTTTCATGATATGTAA</gDNA_template>
            <first_frame> W  L  K  I  S  V  D  *  G  V  I  I  L  L  Y  R  N  S  S  L  L  Q  E  *  V  F  D  *  L  F  L  L  L  L  L  L  K  L  L  A  S  P  V  I  L  S  *  T  L  S  F  I  Q  E  H  L  N  T  F  E  C  L  F  C  S  F  L  Q  T  V  Q  S  S  I  V  L  Q  L  F  S  D  F  *  M  M  V  Y  E  Y  Y  R  C  F  F  S  H  F  L  L  D  D  G  V  P  C  I  L  I  G  *  L  I  *  *  F  Y  L  G  F  S  *  Y  V  </first_frame>
            <second_frame>  G  *  K  S  Q  W  T  K  G  S  L  Y  F  F  T  G  T  A  H  F  F  K  S  K  S  L  I  S  C  F  F  C  F  C  Y  *  S  C  L  H  H  Q  *  Y  F  H  E  L  *  A  S  F  R  N  I  *  T  P  L  N  V  C  F  V  H  F  C  K  L  S  R  V  V  L  F  Y  N  S  F  Q  I  F  E  *  W  F  M  N  I  I  D  V  F  S  L  I  F  C  L  M  M  V  F  H  A  F  *  S  G  D  *  F  N  D  F  I  W  G  F  H  D  M  * </second_frame>
            <third_frame>   V  E  N  L  S  G  L  R  G  H  Y  T  S  L  Q  E  Q  L  T  S  S  R  V  S  L  *  L  V  V  S  S  A  F  V  I  K  V  A  C  I  T  S  D  T  F  M  N  F  K  L  H  S  G  T  F  K  H  L  *  M  F  V  L  F  I  S  A  N  C  P  E  *  Y  C  F  T  T  L  F  R  F  L  N  D  G  L  *  I  L  *  M  F  F  L  S  F  S  A  *  *  W  C  S  M  H  S  N  R  V  I  N  L  M  I  L  F  G  V  F  M  I  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0221M09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="95344" PGL_stop="94970"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="95344" e_stop="94970"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="95344" e_stop="94970" e_length="375"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="95344" stop="94970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M166-R" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAACTCTAATGTTGCCTTTCAATTCCTGCATTGGCAGAAGATTCAGAATGAACATCTAAATTTTTAATCCAAAAGTCAATTTAAGGTAGATTCACATTAGTGATCATAAAGTACCAGAATAGTATTGTGCAGTTTTTTACGCAGTTTCTCTCCTTCAACAATTTTAGTTTCGGCATAAGCAAGACGGTTCTGCAAGTCGAAAATAACATTCTTCTGCTCTTCATATTCTTCTTTTGTCCTCACAGCAGACATGTCGGACATCTAACAAAGTGATTAAACATTTGAAATATTTGAGAAATATATCTTCTAAAAGCTCGTTGGATATTACACGGTAAATTCAAACAAACAAGGGTCATAGAAATGCTGTCACCTCA</gDNA_template>
            <first_frame> K  T  L  M  L  P  F  N  S  C  I  G  R  R  F  R  M  N  I  *  I  F  N  P  K  V  N  L  R  *  I  H  I  S  D  H  K  V  P  E  *  Y  C  A  V  F  Y  A  V  S  L  L  Q  Q  F  *  F  R  H  K  Q  D  G  S  A  S  R  K  *  H  S  S  A  L  H  I  L  L  L  S  S  Q  Q  T  C  R  T  S  N  K  V  I  K  H  L  K  Y  L  R  N  I  S  S  K  S  S  L  D  I  T  R  *  I  Q  T  N  K  G  H  R  N  A  V  T  S </first_frame>
            <second_frame>  K  L  *  C  C  L  S  I  P  A  L  A  E  D  S  E  *  T  S  K  F  L  I  Q  K  S  I  *  G  R  F  T  L  V  I  I  K  Y  Q  N  S  I  V  Q  F  F  T  Q  F  L  S  F  N  N  F  S  F  G  I  S  K  T  V  L  Q  V  E  N  N  I  L  L  L  F  I  F  F  F  C  P  H  S  R  H  V  G  H  L  T  K  *  L  N  I  *  N  I  *  E  I  Y  L  L  K  A  R  W  I  L  H  G  K  F  K  Q  T  R  V  I  E  M  L  S  P   </second_frame>
            <third_frame>   N  S  N  V  A  F  Q  F  L  H  W  Q  K  I  Q  N  E  H  L  N  F  *  S  K  S  Q  F  K  V  D  S  H  *  *  S  *  S  T  R  I  V  L  C  S  F  L  R  S  F  S  P  S  T  I  L  V  S  A  *  A  R  R  F  C  K  S  K  I  T  F  F  C  S  S  Y  S  S  F  V  L  T  A  D  M  S  D  I  *  Q  S  D  *  T  F  E  I  F  E  K  Y  I  F  *  K  L  V  G  Y  Y  T  V  N  S  N  K  Q  G  S  *  K  C  C  H  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0221M09.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="99540" PGL_stop="100808"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="99540" e_stop="100808"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="99540" e_stop="100808" e_length="1269"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99540" stop="100254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7819-2" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99583" stop="100808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7819" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGCTTCTCTATAGCCTTATCCAGATGAACACATGTGTTCCCAAAATTGCAAGTATTTTCTTTGCAAAAACTCTATTCCCTTGGACAAGAATTGACTTCAAATGGCTTCTAATCTTGTAAAATTTCATTCTTCATTCCAGTTCAAGCTGAACACAACAAGTTCCTTAAGTTTTTTAGGATCAAAACAACAACTTAACAATCTTTATCACTCTATTTTCTTCACAAAACCCAAGTCAGATTTTTCACCTCTTCAATGTTCACTATCTTCTCCTACTCCACCTATAACTAAAGAAGATGCCGTTTCTCAAGCAAAATTCTCTCTGTCAACTACTTTAGAGAAACCCCTTAACAATCCCAAACTCATAGGGAAAATCAAGAAACTCAAACAACCAAGATTTCGTGTCGAAATTCCAGTTGTTGATGACTCCCCATCTGCATTAGCCCAACTTGCTTTTGACATTTTTGGAGAAATGCCCATCAAAAGAAAAGCCCCAAACATCAAGATTCTACTTTTATGGCCTAACCAAACCTTAACCCAAGCTGCACAAGCAGAATTTGAAAAGAAGAAATCTTCAAACCCCATCATTGAAAATTTAGATATTTCATCAAGAATTGAAATTTCTGCTGATGTGGTAGTGTTTATGGCTCCAGAGGCTTCAATATTGACTGTAATGAAGGAGATTTCTGATACATTGTACCCAATGCCTGTCGTGATTTTTAATCCTAAATGGGGTTTTGATGAAGAGAGTAGTTTTGGTGAGTTGAGTGGATTTGTAGGTTCATTTGAGGTTGTGTATTCATTTATGGGATTGGAAGTTAGAGGGATATTGAGTAATAGAAAAGGGGTGATGTTTAAATGTGTTAAAGATGGTGTTTTGAGTGGTGAGAAATGGTATGTGTTCGTCGAAGAAGATGGAGAGTTGAAAGTGGTTTCAAGGTTTAAAGCAAGGCCATCAATTGTTGAAGTTGAGAATGTTTTGTATAACTTGATGGCCGTGAATTCGCCAATCACGAAATCAGCTAAGTTCTTGAAAGATTTGGTGTCAAATGTTAGGGGGAAAAAGTAAAGCACAAGCAATTCAAGGTATTACAACTCACATCATTTCAACTTTAGGATAGCTATCCTTTGCAATGATATTATTGTTTTTTCGAGATTTTGTTCTTCCTAGAACAGTTACAGTATGAAGTCCATGTACTAGCTTTGCCAGGTTCAAAACTTTAACATGGAAGAACAAATAATAACCTATTGGCTGCATGAACTAAGCATC</gDNA_template>
            <first_frame> E  A  S  L  *  P  Y  P  D  E  H  M  C  S  Q  N  C  K  Y  F  L  C  K  N  S  I  P  L  D  K  N  *  L  Q  M  A  S  N  L  V  K  F  H  S  S  F  Q  F  K  L  N  T  T  S  S  L  S  F  L  G  S  K  Q  Q  L  N  N  L  Y  H  S  I  F  F  T  K  P  K  S  D  F  S  P  L  Q  C  S  L  S  S  P  T  P  P  I  T  K  E  D  A  V  S  Q  A  K  F  S  L  S  T  T  L  E  K  P  L  N  N  P  K  L  I  G  K  I  K  K  L  K  Q  P  R  F  R  V  E  I  P  V  V  D  D  S  P  S  A  L  A  Q  L  A  F  D  I  F  G  E  M  P  I  K  R  K  A  P  N  I  K  I  L  L  L  W  P  N  Q  T  L  T  Q  A  A  Q  A  E  F  E  K  K  K  S  S  N  P  I  I  E  N  L  D  I  S  S  R  I  E  I  S  A  D  V  V  V  F  M  A  P  E  A  S  I  L  T  V  M  K  E  I  S  D  T  L  Y  P  M  P  V  V  I  F  N  P  K  W  G  F  D  E  E  S  S  F  G  E  L  S  G  F  V  G  S  F  E  V  V  Y  S  F  M  G  L  E  V  R  G  I  L  S  N  R  K  G  V  M  F  K  C  V  K  D  G  V  L  S  G  E  K  W  Y  V  F  V  E  E  D  G  E  L  K  V  V  S  R  F  K  A  R  P  S  I  V  E  V  E  N  V  L  Y  N  L  M  A  V  N  S  P  I  T  K  S  A  K  F  L  K  D  L  V  S  N  V  R  G  K  K  *  S  T  S  N  S  R  Y  Y  N  S  H  H  F  N  F  R  I  A  I  L  C  N  D  I  I  V  F  S  R  F  C  S  S  *  N  S  Y  S  M  K  S  M  Y  *  L  C  Q  V  Q  N  F  N  M  E  E  Q  I  I  T  Y  W  L  H  E  L  S  I </first_frame>
            <second_frame>  K  L  L  Y  S  L  I  Q  M  N  T  C  V  P  K  I  A  S  I  F  F  A  K  T  L  F  P  W  T  R  I  D  F  K  W  L  L  I  L  *  N  F  I  L  H  S  S  S  S  *  T  Q  Q  V  P  *  V  F  *  D  Q  N  N  N  L  T  I  F  I  T  L  F  S  S  Q  N  P  S  Q  I  F  H  L  F  N  V  H  Y  L  L  L  L  H  L  *  L  K  K  M  P  F  L  K  Q  N  S  L  C  Q  L  L  *  R  N  P  L  T  I  P  N  S  *  G  K  S  R  N  S  N  N  Q  D  F  V  S  K  F  Q  L  L  M  T  P  H  L  H  *  P  N  L  L  L  T  F  L  E  K  C  P  S  K  E  K  P  Q  T  S  R  F  Y  F  Y  G  L  T  K  P  *  P  K  L  H  K  Q  N  L  K  R  R  N  L  Q  T  P  S  L  K  I  *  I  F  H  Q  E  L  K  F  L  L  M  W  *  C  L  W  L  Q  R  L  Q  Y  *  L  *  *  R  R  F  L  I  H  C  T  Q  C  L  S  *  F  L  I  L  N  G  V  L  M  K  R  V  V  L  V  S  *  V  D  L  *  V  H  L  R  L  C  I  H  L  W  D  W  K  L  E  G  Y  *  V  I  E  K  G  *  C  L  N  V  L  K  M  V  F  *  V  V  R  N  G  M  C  S  S  K  K  M  E  S  *  K  W  F  Q  G  L  K  Q  G  H  Q  L  L  K  L  R  M  F  C  I  T  *  W  P  *  I  R  Q  S  R  N  Q  L  S  S  *  K  I  W  C  Q  M  L  G  G  K  S  K  A  Q  A  I  Q  G  I  T  T  H  I  I  S  T  L  G  *  L  S  F  A  M  I  L  L  F  F  R  D  F  V  L  P  R  T  V  T  V  *  S  P  C  T  S  F  A  R  F  K  T  L  T  W  K  N  K  *  *  P  I  G  C  M  N  *  A   </second_frame>
            <third_frame>   S  F  S  I  A  L  S  R  *  T  H  V  F  P  K  L  Q  V  F  S  L  Q  K  L  Y  S  L  G  Q  E  L  T  S  N  G  F  *  S  C  K  I  S  F  F  I  P  V  Q  A  E  H  N  K  F  L  K  F  F  R  I  K  T  T  T  *  Q  S  L  S  L  Y  F  L  H  K  T  Q  V  R  F  F  T  S  S  M  F  T  I  F  S  Y  S  T  Y  N  *  R  R  C  R  F  S  S  K  I  L  S  V  N  Y  F  R  E  T  P  *  Q  S  Q  T  H  R  E  N  Q  E  T  Q  T  T  K  I  S  C  R  N  S  S  C  *  *  L  P  I  C  I  S  P  T  C  F  *  H  F  W  R  N  A  H  Q  K  K  S  P  K  H  Q  D  S  T  F  M  A  *  P  N  L  N  P  S  C  T  S  R  I  *  K  E  E  I  F  K  P  H  H  *  K  F  R  Y  F  I  K  N  *  N  F  C  *  C  G  S  V  Y  G  S  R  G  F  N  I  D  C  N  E  G  D  F  *  Y  I  V  P  N  A  C  R  D  F  *  S  *  M  G  F  *  *  R  E  *  F  W  *  V  E  W  I  C  R  F  I  *  G  C  V  F  I  Y  G  I  G  S  *  R  D  I  E  *  *  K  R  G  D  V  *  M  C  *  R  W  C  F  E  W  *  E  M  V  C  V  R  R  R  R  W  R  V  E  S  G  F  K  V  *  S  K  A  I  N  C  *  S  *  E  C  F  V  *  L  D  G  R  E  F  A  N  H  E  I  S  *  V  L  E  R  F  G  V  K  C  *  G  E  K  V  K  H  K  Q  F  K  V  L  Q  L  T  S  F  Q  L  *  D  S  Y  P  L  Q  *  Y  Y  C  F  F  E  I  L  F  F  L  E  Q  L  Q  Y  E  V  H  V  L  A  L  P  G  S  K  L  *  H  G  R  T  N  N  N  L  L  A  A  *  T  K  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0221M09.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99636" stop="100607"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>969</number_coding_nucleotides>
                  <number_encoded_amino_acids>323</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQMASNLVKFHSSFQFKLNTTSSLSFLGSKQQLNNLYHSIFFTKPKSDFSPLQCSLSSPTPPITKEDAVSQAKFSLSTTLEKPLNNPKLIGKIKKLKQPRFRVEIPVVDDSPSALAQLAFDIFGEMPIKRKAPNIKILLLWPNQTLTQAAQAEFEKKKSSNPIIENLDISSRIEISADVVVFMAPEASILTVMKEISDTLYPMPVVIFNPKWGFDEESSFGELSGFVGSFEVVYSFMGLEVRGILSNRKGVMFKCVKDGVLSGEKWYVFVEEDGELKVVSRFKARPSIVEVENVLYNLMAVNSPITKSAKFLKDLVSNVRGKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="127850" PGL_stop="131755"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="127850" e_stop="127971"/>
            <exon e_start="129363" e_stop="129486"/>
            <exon e_start="129701" e_stop="129934"/>
            <exon e_start="130081" e_stop="130371"/>
            <exon e_start="131299" e_stop="131755"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.945" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.926" e_score="1.000"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="127850" e_stop="127971" e_length="122"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.945">
            <gDNA_intron_boundary i_start="127972" i_stop="129362" i_length="1391"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="129363" e_stop="129486" e_length="124"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.993">
            <gDNA_intron_boundary i_start="129487" i_stop="129700" i_length="214"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="129701" e_stop="129934" e_length="234"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.997">
            <gDNA_intron_boundary i_start="129935" i_stop="130080" i_length="146"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="130081" e_stop="130371" e_length="291"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.926">
            <gDNA_intron_boundary i_start="130372" i_stop="131298" i_length="927"/>
          </intron>
          <exon e_serial="5" e_score="0.991">
            <gDNA_exon_boundary e_start="131299" e_stop="131755" e_length="457"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127850" stop="127971"/>
              <exon start="129363" stop="129486"/>
              <exon start="129701" stop="129934"/>
              <exon start="130081" stop="130371"/>
              <exon start="131299" stop="131755"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7942" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="127877" stop="127971"/>
              <exon start="129363" stop="129486"/>
              <exon start="129701" stop="129934"/>
              <exon start="130081" stop="130371"/>
              <exon start="131299" stop="131685"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7942-2" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGTGTTTTAATAATTGGCTTACAGCTGATGTGAAGTAAGAACACAATGGTTTGCTACAATTTGGTGGCCCAACAATCACCTCCAATTTTGGTTCAATCACAATATCCGTCAAAACCCAG : GGGGTTGTCTGTGAAAGTGGTGTCTTCCTGCTGCACTGAATGTCCAATATTTGGTAAGGTTGAGGTTAAACATGTCATTTCTGGTCTTGCGGCATCAATCCTATTTCTCTCTCAAAGTAGCATG : GCTTTTGCAGCAGACCTCCCTCATTACAACAGTGTATTTCAACTTGCAAATGTCGCGGACAGCATGCCAACACTTCCTTTGGAGAAGGGAAATGATGGTGGAAAGCTGATGATGATGCGAGGCATGACAGCGAAAGACTTTGATCCAATCAGGTATTCTGGAAGATGGTTCGAAGTAGCTTCCCTTAAACGTGGATTTGCTGGACAAGGTCAAGAAGATTGTCATTGCACACAG : GGCATTTACACTGTTGATATGAATGCACCTGCTATCCAAGTAGACACATTTTGCGTTCATGGAGGACCTGATGGCTACATCACAGGCATAAGGGGAAGGGTTCAATGCCTTAATGAGGAGGATAAGGAGAAAGACGAGACTGATCTAGAAAGGCAAGAAATGATTAGGGAGAAGTGTTACCTTAGGTTTCCTACACTGCCGTTCATCCCTAAGGAGCCTTATGATGTAATTGCAACTGATTATGATAACTTCGCACTGGTTTCTGGAGCTAAAGATAAAAGCTTCGTTCAG : ATATACTCGAGGACGCCTAATCCAGGACCAGAATTTATCGACAGGTACAAGAACTACTTAGCAAGTTTCGGATATGATCCAAGCAAAATCAATGACACTCCACAAGACTGTGAGGTAAAGACTACCAGTCAGCTATCAGCAATGATGTCCATGTCCGGAATGCAACAAGCTCTAAACAACCAATTTCCTGATTTAGAGTTGAGACGCCCTGTTCAATTCAACCCATTCACAAGCGTTTTCGAAACTCTCAAGAAACTTGCTGAACTATATTTCAAGTAGTAAATCCACTTGATATATTACTTGTATAGTGCATAGTTCTTATGACTAGTGGCTGTAACACATTGAACTAAAGTTCAACTATGAATGACATACACTCCAGAAAAATTTGTGTGTTACTATTGGGAAAATGGTAGACATATGTGAATGACATGCTTATATTTGGTATGAGTTTAAAATA</gDNA_template>
            <first_frame> K  S  V  L  I  I  G  L  Q  L  M  *  S  K  N  T  M  V  C  Y  N  L  V  A  Q  Q  S  P  P  I  L  V  Q  S  Q  Y  P  S  K  P  R :   G  L  S  V  K  V  V  S  S  C  C  T  E  C  P  I  F  G  K  V  E  V  K  H  V  I  S  G  L  A  A  S  I  L  F  L  S  Q  S  S  M  :  A  F  A  A  D  L  P  H  Y  N  S  V  F  Q  L  A  N  V  A  D  S  M  P  T  L  P  L  E  K  G  N  D  G  G  K  L  M  M  M  R  G  M  T  A  K  D  F  D  P  I  R  Y  S  G  R  W  F  E  V  A  S  L  K  R  G  F  A  G  Q  G  Q  E  D  C  H  C  T  Q  :  G  I  Y  T  V  D  M  N  A  P  A  I  Q  V  D  T  F  C  V  H  G  G  P  D  G  Y  I  T  G  I  R  G  R  V  Q  C  L  N  E  E  D  K  E  K  D  E  T  D  L  E  R  Q  E  M  I  R  E  K  C  Y  L  R  F  P  T  L  P  F  I  P  K  E  P  Y  D  V  I  A  T  D  Y  D  N  F  A  L  V  S  G  A  K  D  K  S  F  V  Q  :  I  Y  S  R  T  P  N  P  G  P  E  F  I  D  R  Y  K  N  Y  L  A  S  F  G  Y  D  P  S  K  I  N  D  T  P  Q  D  C  E  V  K  T  T  S  Q  L  S  A  M  M  S  M  S  G  M  Q  Q  A  L  N  N  Q  F  P  D  L  E  L  R  R  P  V  Q  F  N  P  F  T  S  V  F  E  T  L  K  K  L  A  E  L  Y  F  K  *  *  I  H  L  I  Y  Y  L  Y  S  A  *  F  L  *  L  V  A  V  T  H  *  T  K  V  Q  L  *  M  T  Y  T  P  E  K  F  V  C  Y  Y  W  E  N  G  R  H  M  *  M  T  C  L  Y  L  V  *  V  *  N  </first_frame>
            <second_frame>  K  V  F  *  *  L  A  Y  S  *  C  E  V  R  T  Q  W  F  A  T  I  W  W  P  N  N  H  L  Q  F  W  F  N  H  N  I  R  Q  N  P   : G  G  C  L  *  K  W  C  L  P  A  A  L  N  V  Q  Y  L  V  R  L  R  L  N  M  S  F  L  V  L  R  H  Q  S  Y  F  S  L  K  V  A  W :   L  L  Q  Q  T  S  L  I  T  T  V  Y  F  N  L  Q  M  S  R  T  A  C  Q  H  F  L  W  R  R  E  M  M  V  E  S  *  *  *  C  E  A  *  Q  R  K  T  L  I  Q  S  G  I  L  E  D  G  S  K  *  L  P  L  N  V  D  L  L  D  K  V  K  K  I  V  I  A  H  R :   A  F  T  L  L  I  *  M  H  L  L  S  K  *  T  H  F  A  F  M  E  D  L  M  A  T  S  Q  A  *  G  E  G  F  N  A  L  M  R  R  I  R  R  K  T  R  L  I  *  K  G  K  K  *  L  G  R  S  V  T  L  G  F  L  H  C  R  S  S  L  R  S  L  M  M  *  L  Q  L  I  M  I  T  S  H  W  F  L  E  L  K  I  K  A  S  F  R :   Y  T  R  G  R  L  I  Q  D  Q  N  L  S  T  G  T  R  T  T  *  Q  V  S  D  M  I  Q  A  K  S  M  T  L  H  K  T  V  R  *  R  L  P  V  S  Y  Q  Q  *  C  P  C  P  E  C  N  K  L  *  T  T  N  F  L  I  *  S  *  D  A  L  F  N  S  T  H  S  Q  A  F  S  K  L  S  R  N  L  L  N  Y  I  S  S  S  K  S  T  *  Y  I  T  C  I  V  H  S  S  Y  D  *  W  L  *  H  I  E  L  K  F  N  Y  E  *  H  T  L  Q  K  N  L  C  V  T  I  G  K  M  V  D  I  C  E  *  H  A  Y  I  W  Y  E  F  K  I </second_frame>
            <third_frame>   K  C  F  N  N  W  L  T  A  D  V  K  *  E  H  N  G  L  L  Q  F  G  G  P  T  I  T  S  N  F  G  S  I  T  I  S  V  K  T  Q  :  G  V  V  C  E  S  G  V  F  L  L  H  *  M  S  N  I  W  *  G  *  G  *  T  C  H  F  W  S  C  G  I  N  P  I  S  L  S  K  *  H   : G  F  C  S  R  P  P  S  L  Q  Q  C  I  S  T  C  K  C  R  G  Q  H  A  N  T  S  F  G  E  G  K  *  W  W  K  A  D  D  D  A  R  H  D  S  E  R  L  *  S  N  Q  V  F  W  K  M  V  R  S  S  F  P  *  T  W  I  C  W  T  R  S  R  R  L  S  L  H  T   : G  H  L  H  C  *  Y  E  C  T  C  Y  P  S  R  H  I  L  R  S  W  R  T  *  W  L  H  H  R  H  K  G  K  G  S  M  P  *  *  G  G  *  G  E  R  R  D  *  S  R  K  A  R  N  D  *  G  E  V  L  P  *  V  S  Y  T  A  V  H  P  *  G  A  L  *  C  N  C  N  *  L  *  *  L  R  T  G  F  W  S  *  R  *  K  L  R  S   : D  I  L  E  D  A  *  S  R  T  R  I  Y  R  Q  V  Q  E  L  L  S  K  F  R  I  *  S  K  Q  N  Q  *  H  S  T  R  L  *  G  K  D  Y  Q  S  A  I  S  N  D  V  H  V  R  N  A  T  S  S  K  Q  P  I  S  *  F  R  V  E  T  P  C  S  I  Q  P  I  H  K  R  F  R  N  S  Q  E  T  C  *  T  I  F  Q  V  V  N  P  L  D  I  L  L  V  *  C  I  V  L  M  T  S  G  C  N  T  L  N  *  S  S  T  M  N  D  I  H  S  R  K  I  C  V  L  L  L  G  K  W  *  T  Y  V  N  D  M  L  I  F  G  M  S  L  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0221M09.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="127886" stop="127971"/>
                    <exon start="129363" stop="129486"/>
                    <exon start="129701" stop="129934"/>
                    <exon start="130081" stop="130371"/>
                    <exon start="131299" stop="131577"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1011</number_coding_nucleotides>
                  <number_encoded_amino_acids>337</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKNTMVCYNLVAQQSPPILVQSQYPSKPRGLSVKVVSSCCTECPIFGKVEVKHVISGLAASILFLSQSSMAFAADLPHYNSVFQLANVADSMPTLPLEKGNDGGKLMMMRGMTAKDFDPIRYSGRWFEVASLKRGFAGQGQEDCHCTQGIYTVDMNAPAIQVDTFCVHGGPDGYITGIRGRVQCLNEEDKEKDETDLERQEMIREKCYLRFPTLPFIPKEPYDVIATDYDNFALVSGAKDKSFVQIYSRTPNPGPEFIDRYKNYLASFGYDPSKINDTPQDCEVKTTSQLSAMMSMSGMQQALNNQFPDLELRRPVQFNPFTSVFETLKKLAELYFK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 16 chains have been computed
$ 
$ memory statistics:
$ 12208 bytes spliced alignments in total
$ 6 spliced alignments have been stored
$ 2034 bytes was the average size of a spliced alignment
$ 9184 bytes predicted gene locations in total
$ 4 predicted gene locations have been stored
$ 2296 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 16 backtrace matrices have been allocated
$ 
$ date finished: 2008-04-10 00:12:34
-->
