<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-02-20 12:17:02"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E318169" ref_strand="+" ref_description="SGN-E318169 [cTOA-29-C16]">
      <seq>aaaaatcatcaagaaaaaaaaaattctcttcttccttttttttctatgatttaatttcatattaattcagatcaagaaaaagattatcggaatatatcgaagatgaagaataagaagaatattgaaagaaataaaagggaaaaataccctttaatttcttatcaagaattaccagaatatatgaaggataatgagtttattttgaattattatagagctaattggcctctcaaacaagcatttttcagtattttcagttggcataatgaaactcttaatgtttggacgcatttaattggatttattctatttgtggtattaaccatagctaatgcagagcatttatctcaaattgctgattttatgactatgtttatccggaattttccaacaagtggagatgcgaatatatctcacaattttaaggtacttttaagtattgttagtagtaacttaatgaacttataagttatttaatatatcgatacaattcagtcgcttaaaagataattacaggtctaatatactcaataactaaaattagttacttaatataaaataagtaagaagtagacccttcggggtggtctagtggtttgagcttgggacttccatgttgggagtttaagttncaaaccccttgccagcgaaagcaaaaatttacctctcctgcggatttcccttgtcataaaaaaaagagagtaagaaaatacttattcatactgggatcgagtactaactggaaaataaataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="1" stop="2059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1" g_stop="237" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="287" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="238" i_stop="534" i_length="297">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="535" g_stop="627" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="380" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="628" i_stop="1414" i_length="787">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1415" g_stop="1790" g_length="376"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="755" r_length="375" r_score="0.963"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E318169" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="0.935" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1" e_stop="237"/>
          <exon e_start="535" e_stop="627"/>
          <exon e_start="1415" e_stop="1790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTTCATATTAATTCAGATCAAGAAAAAGATTATCGGAATATATCGAAGATGAAGAATAAGAAGAATATTGAAAGAAATAAAAGGGAAAAATACCCTTTAATTTCTTATCAAGAATTACCAGAATATATGAAGGATAATGAGTTTATTTTGAATTATTATAGAGCTAATTGGCCTCTCAAACAAGCATTTTTCAGTATTTTCAGTTGGCATAATGAAACTCTTAATGTTTGGACGTAAGTATCTCATTTTATTTTTATTTTATTTTGAGTTTTATAAATTCGCTACGAAATTCATCGCTCAATAATTAACTTGTAGTCAACAAAAAATAACAATTTGTTGTTAAATAGAATTAACGATGAATTTTGTTGTTTTACAAAATTTGATAGATAACTTGTCTTAATTTATATTATAATTTTTTTGAATGGCCCTTTTTAGAATAGTTGAAATAATTACTTTGTTTACAATTTATTTTGCTAAAATTTTGAATTTACTTTTCTAAATGGGATCTTGCTTGTTTTGTTTTTTTTCAGGCATTTAATTGGATTTATTCTATTTGTGGTATTAACCATAGCTAATGCAGAGCATTTATCTCAAATTGCTGATTTTATGACTATGTTTATCCGGTATGTAACTAATCAATTTAACGTTTTCGTTAGAAAATTATACTGTATATAAGTTGTATACATAATATTGCATATGAATTTTGAACCTTGTGCCTTTGTTAATTAAAAATCTCAAATTTAAGCTTAATAATTAAGTCGTATTTGATAAAAAAACATTTTAATTTATCCACTTAGAAGGACTTTCAATCGCCAATTAAAATAGTTATCAAACCTTAAAAACTGAATGCAATTTCATAAAAAGACTTTATTTGTATTTATAAATTTGAATTAGTCGAGTCTCGAAGCACAACCAAATTTCTTTGGGTTGGACTTTAGGGATTTAAATTTTCTTTTGATGTGGCAAACTTTAATACGTATACAATTAAAATTATACTAAACCAATGTAATAGAGACATACAGATGTGGTCCATTAATATTTGATGGATATTGAAATGTTAGGTTAAAAAGATACTTTATCAAACTCCCAACTACCATCTTTAAATGTTTGCACATTTATTTCTGTTGATATTCTTTTAGTGATATTTTTTTTTGATGTACGAAATATTTTACGTTAATAATATGGTATAATGTTTAGTGATTATTTTCACTATTTGAGAACTCGTAACCTATTAGATTACATAGAAATAATATAAATAACGTCTTAATTTTCTAAAACATCAAATAATCAATAAATGTGCAAATTTTCATTTAAACCTAGAATTTAAATTTGATTTTCATTTATTATAATTATTATTAATTTTCATAGATTGTCTAAGAAACAAATTTTGTGTTCTCGTTATTTTTACAGGAATTTTCCAACAAGTGGAGATGCGAATATATCTCACAATTTTAAGGTACTTTTAAGTATTGTTAGTAGTAACTTAATGAACTTATAAGTTATTTAATATATCGATACAATTCAGTCGCTTAAAAGATAATTACAGGTCTAATATACTCAATAACTAAAATTAGTTACTTAATATAAAATAAGTAAGAAGTAGACCCTTCGGGGTGGTCTAGTGGTTTGAGCTTGGGACTTCCATGTTGGAGGTTTAAGTTCAAAACCCCTTGCCAGCGAAAGCAAAAATTTACCTCTCCTGCGGATTTCCCTTGTCATAAAAAAAAGAGAGTAAGAAATAACTTATTCATACT--GATCGAGTTACTAAACTGAAAAATAAAATAAA</genome_strand>
        <mrna_strand>TTAATTTCATATTAATTCAGATCAAGAAAAAGATTATCGGAATATATCGAAGATGAAGAATAAGAAGAATATTGAAAGAAATAAAAGGGAAAAATACCCTTTAATTTCTTATCAAGAATTACCAGAATATATGAAGGATAATGAGTTTATTTTGAATTATTATAGAGCTAATTGGCCTCTCAAACAAGCATTTTTCAGTATTTTCAGTTGGCATAATGAAACTCTTAATGTTTGGAC.........................................................................................................................................................................................................................................................................................................GCATTTAATTGGATTTATTCTATTTGTGGTATTAACCATAGCTAATGCAGAGCATTTATCTCAAATTGCTGATTTTATGACTATGTTTATCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTTCCAACAAGTGGAGATGCGAATATATCTCACAATTTTAAGGTACTTTTAAGTATTGTTAGTAGTAACTTAATGAACTTATAAGTTATTTAATATATCGATACAATTCAGTCGCTTAAAAGATAATTACAGGTCTAATATACTCAATAACTAAAATTAGTTACTTAATATAAAATAAGTAAGAAGTAGACCCTTCGGGGTGGTCTAGTGGTTTGAGCTTGGGACTTCCATGTTGGGAGTTTAAGTTNCAAACCCCTTGCCAGCGAAAGCAAAAATTTACCTCTCCTGCGGATTTCCCTTGTCATAAAAAAAAGAGAGTAAGAAAATACTTATTCATACTGGGATCGAG-TACT-AACTGGAAAAT-AAATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E318207" ref_strand="+" ref_description="SGN-E318207 [cTOA-29-D20]">
      <seq>aaaaatcatcaagaaaaaaaaaattctcttcttccttttttttctatgatttaatttcatattaattcagatcaagaaaaagattatcggaatatatcgaagatgaagaataagaagaatattgaaagaaataaaagggaaaaataccctttaatttcttatcaagaattaccagaatatatgaaggataatgagtttattttgaattattatagagctaattggcctctcaaacaagcatttttcagtattttcagttggcataatgaaactcttaatgtttggacgcatttaattggatttattctatttgtggtattaaccatagctaatgcagagcatttatctcaaattgctgattttatgactatgtttatccggaattttccaacaagtggagatgcgaatatatctcacaattttaaggtacttttaagtattgttagtagtaacttaatgaacttataagttatttaatatatcgatacaattcagtcgcttaaaagataattacaggtctaatatactcaataactaaaattagttacttaatataaaataagtaagaagtagacccttcggggtggtctagtggtttgagcttgggacttccatgttggaggtttaagttcaaaaccccttgccagcgaaagcaaaaattacctctcctgcggatttcccttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="1" stop="2019"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1" g_stop="237" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="287" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="238" i_stop="534" i_length="297">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="535" g_stop="627" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="288" r_stop="380" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="628" i_stop="1414" i_length="787">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1415" g_stop="1719" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="684" r_length="304" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E318207" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>635</cumulative_length_of_scored_exons>
        <coverage percentage="0.928" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318207" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1" e_stop="237"/>
          <exon e_start="535" e_stop="627"/>
          <exon e_start="1415" e_stop="1719"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTTCATATTAATTCAGATCAAGAAAAAGATTATCGGAATATATCGAAGATGAAGAATAAGAAGAATATTGAAAGAAATAAAAGGGAAAAATACCCTTTAATTTCTTATCAAGAATTACCAGAATATATGAAGGATAATGAGTTTATTTTGAATTATTATAGAGCTAATTGGCCTCTCAAACAAGCATTTTTCAGTATTTTCAGTTGGCATAATGAAACTCTTAATGTTTGGACGTAAGTATCTCATTTTATTTTTATTTTATTTTGAGTTTTATAAATTCGCTACGAAATTCATCGCTCAATAATTAACTTGTAGTCAACAAAAAATAACAATTTGTTGTTAAATAGAATTAACGATGAATTTTGTTGTTTTACAAAATTTGATAGATAACTTGTCTTAATTTATATTATAATTTTTTTGAATGGCCCTTTTTAGAATAGTTGAAATAATTACTTTGTTTACAATTTATTTTGCTAAAATTTTGAATTTACTTTTCTAAATGGGATCTTGCTTGTTTTGTTTTTTTTCAGGCATTTAATTGGATTTATTCTATTTGTGGTATTAACCATAGCTAATGCAGAGCATTTATCTCAAATTGCTGATTTTATGACTATGTTTATCCGGTATGTAACTAATCAATTTAACGTTTTCGTTAGAAAATTATACTGTATATAAGTTGTATACATAATATTGCATATGAATTTTGAACCTTGTGCCTTTGTTAATTAAAAATCTCAAATTTAAGCTTAATAATTAAGTCGTATTTGATAAAAAAACATTTTAATTTATCCACTTAGAAGGACTTTCAATCGCCAATTAAAATAGTTATCAAACCTTAAAAACTGAATGCAATTTCATAAAAAGACTTTATTTGTATTTATAAATTTGAATTAGTCGAGTCTCGAAGCACAACCAAATTTCTTTGGGTTGGACTTTAGGGATTTAAATTTTCTTTTGATGTGGCAAACTTTAATACGTATACAATTAAAATTATACTAAACCAATGTAATAGAGACATACAGATGTGGTCCATTAATATTTGATGGATATTGAAATGTTAGGTTAAAAAGATACTTTATCAAACTCCCAACTACCATCTTTAAATGTTTGCACATTTATTTCTGTTGATATTCTTTTAGTGATATTTTTTTTTGATGTACGAAATATTTTACGTTAATAATATGGTATAATGTTTAGTGATTATTTTCACTATTTGAGAACTCGTAACCTATTAGATTACATAGAAATAATATAAATAACGTCTTAATTTTCTAAAACATCAAATAATCAATAAATGTGCAAATTTTCATTTAAACCTAGAATTTAAATTTGATTTTCATTTATTATAATTATTATTAATTTTCATAGATTGTCTAAGAAACAAATTTTGTGTTCTCGTTATTTTTACAGGAATTTTCCAACAAGTGGAGATGCGAATATATCTCACAATTTTAAGGTACTTTTAAGTATTGTTAGTAGTAACTTAATGAACTTATAAGTTATTTAATATATCGATACAATTCAGTCGCTTAAAAGATAATTACAGGTCTAATATACTCAATAACTAAAATTAGTTACTTAATATAAAATAAGTAAGAAGTAGACCCTTCGGGGTGGTCTAGTGGTTTGAGCTTGGGACTTCCATGTTGGAGGTTTAAGTTCAAAACCCCTTGCCAGCGAAAGCAAAAATTTACCTCTCCTGCGGATTTCCCTTG</genome_strand>
        <mrna_strand>TTAATTTCATATTAATTCAGATCAAGAAAAAGATTATCGGAATATATCGAAGATGAAGAATAAGAAGAATATTGAAAGAAATAAAAGGGAAAAATACCCTTTAATTTCTTATCAAGAATTACCAGAATATATGAAGGATAATGAGTTTATTTTGAATTATTATAGAGCTAATTGGCCTCTCAAACAAGCATTTTTCAGTATTTTCAGTTGGCATAATGAAACTCTTAATGTTTGGAC.........................................................................................................................................................................................................................................................................................................GCATTTAATTGGATTTATTCTATTTGTGGTATTAACCATAGCTAATGCAGAGCATTTATCTCAAATTGCTGATTTTATGACTATGTTTATCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTTCCAACAAGTGGAGATGCGAATATATCTCACAATTTTAAGGTACTTTTAAGTATTGTTAGTAGTAACTTAATGAACTTATAAGTTATTTAATATATCGATACAATTCAGTCGCTTAAAAGATAATTACAGGTCTAATATACTCAATAACTAAAATTAGTTACTTAATATAAAATAAGTAAGAAGTAGACCCTTCGGGGTGGTCTAGTGGTTTGAGCTTGGGACTTCCATGTTGGAGGTTTAAGTTCAAAACCCCTTGCCAGCGAAAGCAAAAA-TTACCTCTCCTGCGGATTTCCCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E318072" ref_strand="+" ref_description="SGN-E318072 [cTOA-29-C20]">
      <seq>aatcatcaagagaaaaaaaattctcttcttccttttttttctatgatttaatttcatattaattcagatcaagaaaaagattatcggaatatatcgaagatgaagaataagaagaatattgaaagaaataaaagggaaaaataccctttaatttcttatcaagaattaccagaatatatgaaggataatgagtttattttgaattattatagagctaattggcctctcaaacaagcatttttcagtattttcagttggcataatgaaactcttaatgtttggacgcatttaattggatttattctatttgtggtattaaccatagctaatgcagagcatttatctcaaattgctgattttatgactatgtttatccggaattttccaacaagtggagatgcgaatatatctcacaattttaaggtacttttaagtattgttagtagtaacttaatgaacttataagttatttaatatatcgatacgattcagtcgcttgaaagataattacaggtctaatatactcaataactaaaattagttacttaatgtaaaataagtaagaagtagacccttcggggtggtctagtggtttgagcttgggacttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="1" stop="1946"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="1" g_stop="237" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="284" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="238" i_stop="534" i_length="297">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="535" g_stop="627" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="377" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="628" i_stop="1414" i_length="787">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="1415" g_stop="1646" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="609" r_length="232" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E318072" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E318072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="1" e_stop="237"/>
          <exon e_start="535" e_stop="627"/>
          <exon e_start="1415" e_stop="1646"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTTCATATTAATTCAGATCAAGAAAAAGATTATCGGAATATATCGAAGATGAAGAATAAGAAGAATATTGAAAGAAATAAAAGGGAAAAATACCCTTTAATTTCTTATCAAGAATTACCAGAATATATGAAGGATAATGAGTTTATTTTGAATTATTATAGAGCTAATTGGCCTCTCAAACAAGCATTTTTCAGTATTTTCAGTTGGCATAATGAAACTCTTAATGTTTGGACGTAAGTATCTCATTTTATTTTTATTTTATTTTGAGTTTTATAAATTCGCTACGAAATTCATCGCTCAATAATTAACTTGTAGTCAACAAAAAATAACAATTTGTTGTTAAATAGAATTAACGATGAATTTTGTTGTTTTACAAAATTTGATAGATAACTTGTCTTAATTTATATTATAATTTTTTTGAATGGCCCTTTTTAGAATAGTTGAAATAATTACTTTGTTTACAATTTATTTTGCTAAAATTTTGAATTTACTTTTCTAAATGGGATCTTGCTTGTTTTGTTTTTTTTCAGGCATTTAATTGGATTTATTCTATTTGTGGTATTAACCATAGCTAATGCAGAGCATTTATCTCAAATTGCTGATTTTATGACTATGTTTATCCGGTATGTAACTAATCAATTTAACGTTTTCGTTAGAAAATTATACTGTATATAAGTTGTATACATAATATTGCATATGAATTTTGAACCTTGTGCCTTTGTTAATTAAAAATCTCAAATTTAAGCTTAATAATTAAGTCGTATTTGATAAAAAAACATTTTAATTTATCCACTTAGAAGGACTTTCAATCGCCAATTAAAATAGTTATCAAACCTTAAAAACTGAATGCAATTTCATAAAAAGACTTTATTTGTATTTATAAATTTGAATTAGTCGAGTCTCGAAGCACAACCAAATTTCTTTGGGTTGGACTTTAGGGATTTAAATTTTCTTTTGATGTGGCAAACTTTAATACGTATACAATTAAAATTATACTAAACCAATGTAATAGAGACATACAGATGTGGTCCATTAATATTTGATGGATATTGAAATGTTAGGTTAAAAAGATACTTTATCAAACTCCCAACTACCATCTTTAAATGTTTGCACATTTATTTCTGTTGATATTCTTTTAGTGATATTTTTTTTTGATGTACGAAATATTTTACGTTAATAATATGGTATAATGTTTAGTGATTATTTTCACTATTTGAGAACTCGTAACCTATTAGATTACATAGAAATAATATAAATAACGTCTTAATTTTCTAAAACATCAAATAATCAATAAATGTGCAAATTTTCATTTAAACCTAGAATTTAAATTTGATTTTCATTTATTATAATTATTATTAATTTTCATAGATTGTCTAAGAAACAAATTTTGTGTTCTCGTTATTTTTACAGGAATTTTCCAACAAGTGGAGATGCGAATATATCTCACAATTTTAAGGTACTTTTAAGTATTGTTAGTAGTAACTTAATGAACTTATAAGTTATTTAATATATCGATACAATTCAGTCGCTTAAAAGATAATTACAGGTCTAATATACTCAATAACTAAAATTAGTTACTTAATATAAAATAAGTAAGAAGTAGACCCTTCGGGGTGGTCTAGTGGTTTGAGCTTGGGACTTC</genome_strand>
        <mrna_strand>TTAATTTCATATTAATTCAGATCAAGAAAAAGATTATCGGAATATATCGAAGATGAAGAATAAGAAGAATATTGAAAGAAATAAAAGGGAAAAATACCCTTTAATTTCTTATCAAGAATTACCAGAATATATGAAGGATAATGAGTTTATTTTGAATTATTATAGAGCTAATTGGCCTCTCAAACAAGCATTTTTCAGTATTTTCAGTTGGCATAATGAAACTCTTAATGTTTGGAC.........................................................................................................................................................................................................................................................................................................GCATTTAATTGGATTTATTCTATTTGTGGTATTAACCATAGCTAATGCAGAGCATTTATCTCAAATTGCTGATTTTATGACTATGTTTATCCG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTTTCCAACAAGTGGAGATGCGAATATATCTCACAATTTTAAGGTACTTTTAAGTATTGTTAGTAGTAACTTAATGAACTTATAAGTTATTTAATATATCGATACGATTCAGTCGCTTGAAAGATAATTACAGGTCTAATATACTCAATAACTAAAATTAGTTACTTAATGTAAAATAAGTAAGAAGTAGACCCTTCGGGGTGGTCTAGTGGTTTGAGCTTGGGACTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E267142" ref_strand="+" ref_description="SGN-E267142 [cLEI-4-J24]">
      <seq>ttttctatctatataacaccacaatctttgtaccaaattatttaaccacaaaaaatggagggctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15139" stop="16260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15439" g_stop="15960" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E267142" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267142" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15439" e_stop="15960"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCTATCTATATAACACCACAATCTTTGTACCAAATTATTTAACCACAAAAAATGGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACA</genome_strand>
        <mrna_strand>TTTTCTATCTATATAACACCACAATCTTTGTACCAAATTATTTAACCACAAAAAATGGAGGGCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E724495" ref_strand="+" ref_description="SGN-E724495 [FC24BB03]">
      <seq>ccaaatcggccgaattgaaccacaaaaaatgcagttctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15178" stop="16540"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15478" g_stop="16240" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="776" r_length="763" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E724495" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E724495" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15478" e_stop="16240"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTAACCACAAAAAATGGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTT</genome_strand>
        <mrna_strand>ATTGAACCACAAAAAATGCAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E290301" ref_strand="+" ref_description="SGN-E290301 [cLET-5-N16]">
      <seq>aatggagttctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15192" stop="16305"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15492" g_stop="16005" g_length="514"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E290301" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290301" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15492" e_stop="16005"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGT</genome_strand>
        <mrna_strand>AATGGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E343062" ref_strand="+" ref_description="SGN-E343062 [cTOF-11-M18]">
      <seq>tggagttctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15194" stop="16517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15494" g_stop="16217" g_length="724"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="724" r_length="724" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E343062" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>724</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343062" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15494" e_stop="16217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCT</genome_strand>
        <mrna_strand>TGGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E295014" ref_strand="+" ref_description="SGN-E295014 [cLET-17-P24]">
      <seq>ggagttctctaagataacttcacttcttttcatttctatgctattcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttttcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgattagccccctatcggaattccaccaatctggaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtcaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtataaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgctgggattgcaccggtcacagcttcaccaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15195" stop="16210"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15495" g_stop="15910" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="416" r_length="416" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E295014" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>416</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295014" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15495" e_stop="15910"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAA</genome_strand>
        <mrna_strand>GGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTATTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTTTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTAGCCCCCTATCGGAATTCCACCAATCTGGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTCAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTATAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGCTGGGATTGCACCGGTCACAGCTTCACCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E725787" ref_strand="+" ref_description="SGN-E725787 [LA05CG05]">
      <seq>gagttctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaagggcacatgcccaattgacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15196" stop="16341"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15496" g_stop="16041" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="545" r_length="545" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E725787" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725787" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15496" e_stop="16041"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACA</genome_strand>
        <mrna_strand>GAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAGGGC-ACATGCCCAATTGACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E332884" ref_strand="+" ref_description="SGN-E332884 [cTOD-19-O13]">
      <seq>agttctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccctgttacttgtggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15197" stop="16546"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15497" g_stop="16246" g_length="750"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="750" r_length="750" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E332884" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332884" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15497" e_stop="16246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAA</genome_strand>
        <mrna_strand>AGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCCTGTTACTTGTGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E344463" ref_strand="+" ref_description="SGN-E344463 [cTOF-14-O2]">
      <seq>agttctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15197" stop="16514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15497" g_stop="16214" g_length="718"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="718" r_length="718" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E344463" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344463" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15497" e_stop="16214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACC</genome_strand>
        <mrna_strand>AGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E333160" ref_strand="+" ref_description="SGN-E333160 [cTOD-19-J8]">
      <seq>agttctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15197" stop="16353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15497" g_stop="16053" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E333160" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333160" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15497" e_stop="16053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGG</genome_strand>
        <mrna_strand>AGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E265477" ref_strand="+" ref_description="SGN-E265477 [cLEI-9-N4]">
      <seq>ttctctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15199" stop="16368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15499" g_stop="16068" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="570" r_length="570" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E265477" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265477" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15499" e_stop="16068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTT</genome_strand>
        <mrna_strand>TTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E279223" ref_strand="-" ref_description="SGN-E279223 [cLEL-4-G1]">
      <seq>gtaatttgactttaagtgttgtgcaaaggcaagcagcagcttcaagttcatcaagcccactaagtattggacaacattcattaacagctggatcaccaaggccaatatgaacaagcccacctaaaagatccacacaagccccaagtttcaatgtgtcaattgggcatgttgcctttgttgttggtggacaaggttttttccctttaggtgatggtttaattactggtggaactgtgactggtggaattccaataggtggcaaatcaactggaggttttacaattggtggaactgtgaccggtggaattccgatagggggcaaatcgacagggggtttgacaatgggagtgggaactttgggctttttgggcttgtgagaaggtttaccacaatagccgcatccaagaatgggagtgaatgcacaaaggaaaagcatagaaatgaaacgaagtgaagttatcctcgtgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16492" stop="15201"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16192" g_stop="15893" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="300" r_length="300" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15892" i_stop="15668" i_length="225">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15667" g_stop="15500" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="468" r_length="168" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E279223" ref_strand="-">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279223" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16192" e_stop="15893"/>
          <exon e_start="15667" e_stop="15500"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAATTTGACTTTAAGTGTTGTGCAAAGGCAAGCAGCAGCTTCAAGTTCAACAAGCCCACTAAGTATTGGACAACATTCATTAACAGCTGGATCACCAAGGCCAATATGAACAAGCCCACCTAAAAGATCCACACAAGCCCCAAGTTTCAATGTGTCAATTGGGCATGTTGCCTTTGTTGTTGGTGGACAAGGTTTTTTCCCTTTAGGTGATGGTTTAATTACTGGTGGAACTGTGACTGGTGGAATTCCAATAGGTGGCAAATCAACTGGAGGTTTTACAATTGGTGGAACTGTGACCGGTGGAATCCCAACAGGTGGCAAATCAACAGGTGGTTTTACGATTGGTGGAATTCCGACAGGTGGCAATTTGACAGGTGGTTTTACGATTGGTGGAATTCCGACAGGTGGCAATATGACGGGCGGTTTTACGATTGGTGGAATTCCGATAGGTGGCAATTTGACTGGTGGTTTTACGATCGGTGGAATTCCGATAGGGGGCAAATTAACAGGTGGTTTCACGATTGGTGGAATTCCGATAGGGGGCAAATCGACAGGGGGTTTGACAATGGGAGTGGGAACTTTGGGCTTTTTGGGCTTGTGAGAAGGTTTACCACAATAGCCACATCCAAGAATGGGAGTGAATGAAGAAAGGAAAAGCATAGAAATGAAAAGAAGTGAAGTTATCTTAGAGA</genome_strand>
        <mrna_strand>GTAATTTGACTTTAAGTGTTGTGCAAAGGCAAGCAGCAGCTTCAAGTTCATCAAGCCCACTAAGTATTGGACAACATTCATTAACAGCTGGATCACCAAGGCCAATATGAACAAGCCCACCTAAAAGATCCACACAAGCCCCAAGTTTCAATGTGTCAATTGGGCATGTTGCCTTTGTTGTTGGTGGACAAGGTTTTTTCCCTTTAGGTGATGGTTTAATTACTGGTGGAACTGTGACTGGTGGAATTCCAATAGGTGGCAAATCAACTGGAGGTTTTACAATTGGTGGAACTGTGACCG.................................................................................................................................................................................................................................GTGGAATTCCGATAGGGGGCAAATCGACAGGGGGTTTGACAATGGGAGTGGGAACTTTGGGCTTTTTGGGCTTGTGAGAAGGTTTACCACAATAGCCGCATCCAAGAATGGGAGTGAATGCACAAAGGAAAAGCATAGAAATGAAACGAAGTGAAGTTATCCTCGTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E279075" ref_strand="+" ref_description="SGN-E279075 [cLEL-4-C22]">
      <seq>gcacgaggataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtcgctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaaccttcagttgatttgccaccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15201" stop="16240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15500" g_stop="15940" g_length="441"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="441" r_length="441" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E279075" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>441</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279075" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15500" e_stop="15940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTA</genome_strand>
        <mrna_strand>GCACGAGGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTCGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTTCAGTTGATTTGCCACCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E311950" ref_strand="+" ref_description="SGN-E311950 [cTOA-16-M19]">
      <seq>gctaagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15203" stop="16211"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15502" g_stop="15911" g_length="410"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="410" r_length="410" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E311950" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>410</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E311950" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15502" e_stop="15911"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAAT</genome_strand>
        <mrna_strand>GCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E732699" ref_strand="+" ref_description="SGN-E732699 [LB02DE12]">
      <seq>ctatgataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15203" stop="17255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15503" g_stop="16281" g_length="779"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="779" r_length="779" r_score="0.999"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="16955" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="780" r_stop="862" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E732699" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>862</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732699" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15503" e_stop="16281"/>
          <exon e_start="16873" e_stop="16955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACC</genome_strand>
        <mrna_strand>CTATGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E327876" ref_strand="+" ref_description="SGN-E327876 [cTOC-22-K9]">
      <seq>taagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15204" stop="16533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15504" g_stop="16233" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="730" r_length="730" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E327876" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>730</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327876" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15504" e_stop="16233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTT</genome_strand>
        <mrna_strand>TAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E327875" ref_strand="+" ref_description="SGN-E327875 [cTOC-22-K7]">
      <seq>taagataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttgnggcttgtgtggatcttttangtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacnacactttaagtcaaattacttaacctcaaaatctatgtacctctagcacttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15204" stop="16526"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15504" g_stop="16226" g_length="723"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="723" r_length="723" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E327875" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>723</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327875" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15504" e_stop="16226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCA</genome_strand>
        <mrna_strand>TAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGNGGCTTGTGTGGATCTTTTANGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACNACACTTTAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E439686" ref_strand="-" ref_description="SGN-E439686 [cSTA-13-K15]">
      <seq>tggcaaatcaactggaggttttactggtggaactgtgacaggtggaattccaataggtggcaaatcaacgggcggttttacgattggtggaactgtgacaggtggaattccaataggtggcaaatcaacgggtggttttacgattggtggaacagtgacgggtggaattccgataggtggcaaatggatagggggtttgacaatgggagaaggaactttgggctttttgggcttgtgagaaggtttaccacaatagccccaaccaagaatgggagtgagggaagaaaggaaaagcatggaaatgaaaagaagtgaagttatctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16273" stop="15204"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15985" g_stop="15833" g_length="153"/>
          <reference_exon_boundary r_type="cDNA" r_start="12" r_stop="161" r_length="150" r_score="0.876"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15832" i_stop="15668" i_length="165">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15667" g_stop="15504" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="162" r_stop="325" r_length="164" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E439686" ref_strand="-">
        <total_alignment_score>0.902</total_alignment_score>
        <cumulative_length_of_scored_exons>317</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E439686" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15985" e_stop="15833"/>
          <exon e_start="15667" e_stop="15504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGATGGTTTAATTACTGGTGGAACTGTGACTGGTGGAATTCCAATAGGTGGCAAATCAACTGGAGGTTTTACAATTGGTGGAACTGTGACCGGTGGAATCCCAACAGGTGGCAAATCAACAGGTGGTTTTACGATTGGTGGAATTCCGACAGGTGGCAATTTGACAGGTGGTTTTACGATTGGTGGAATTCCGACAGGTGGCAATATGACGGGCGGTTTTACGATTGGTGGAATTCCGATAGGTGGCAATTTGACTGGTGGTTTTACGATCGGTGGAATTCCGATAGGGGGCAAATTAACAGGTGGTTTCACGATTGGTGGAATTCCGATAGGGGGCAAATCGACAGGGGGTTTGACAATGGGAGTGGGAACTTTGGGCTTTTTGGGCTTGTGAGAAGGTTTACCACAATAGCCACATCCAAGAATGGGAGTGAATGAAGAAAGGAAAAGCATAGAAATGAAAAGAAGTGAAGTTATCTTA</genome_strand>
        <mrna_strand>CTGGAGGT-T--TTACTGGTGGAACTGTGACAGGTGGAATTCCAATAGGTGGCAAATCAACGGGCGGTTTTACGATTGGTGGAACTGTGACAGGTGGAATTCCAATAGGTGGCAAATCAACGGGTGGTTTTACGATTGGTGGAACAGTGACGG.....................................................................................................................................................................GTGGAATTCCGATAGGTGGCAAATGGATAGGGGGTTTGACAATGGGAGAAGGAACTTTGGGCTTTTTGGGCTTGTGAGAAGGTTTACCACAATAGCCCCAACCAAGAATGGGAGTGAGGGAAGAAAGGAAAAGCATGGAAATGAAAAGAAGTGAAGTTATCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E348761" ref_strand="+" ref_description="SGN-E348761 [cTOF-29-O7]">
      <seq>ataacttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttnggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtngggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15208" stop="16514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15508" g_stop="16214" g_length="707"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="709" r_length="709" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E348761" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15508" e_stop="16214"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTT-GGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGT-GGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACC</genome_strand>
        <mrna_strand>ATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTNGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTNGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E277846" ref_strand="+" ref_description="SGN-E277846 [cLEL-5-I22]">
      <seq>gcacgagcttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15217" stop="16187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15509" g_stop="15887" g_length="379"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E277846" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>379</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277846" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15509" e_stop="15887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGAT</genome_strand>
        <mrna_strand>GCAC-GAGCTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E285278" ref_strand="+" ref_description="SGN-E285278 [cLER-20-G1]">
      <seq>acttcacttattttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15211" stop="16510"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15511" g_stop="16210" g_length="700"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="700" r_length="700" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E285278" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>700</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E285278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15511" e_stop="16210"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATG</genome_strand>
        <mrna_strand>ACTTCACTTATTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E332118" ref_strand="+" ref_description="SGN-E332118 [cTOD-16-M8]">
      <seq>ttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttangtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15213" stop="16532"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15513" g_stop="16232" g_length="720"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="720" r_length="720" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E332118" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>720</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15513" e_stop="16232"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCT</genome_strand>
        <mrna_strand>TTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTANGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E284057" ref_strand="+" ref_description="SGN-E284057 [cLER-13-A14]">
      <seq>ttcacttcttttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccccgtcgatttgccccctatcggaatttcaccaatcgcgaaaccacctgctaatttgccccctatcgaaattccaccgatcgtaaaaccaccagtcaaaatgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaatagccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattgcaccggtcacagttccaccaattgtaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15213" stop="16217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15513" g_stop="15917" g_length="405"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="405" r_length="405" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E284057" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284057" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15513" e_stop="15917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAA</genome_strand>
        <mrna_strand>TTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCCGTCGATTTGCCCCCTATCGGAATTTCACCAATCGCGAAACCACCTGCTAATTTGCCCCCTATCGAAATTCCACCGATCGTAAAACCACCAGTCAAAATGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATAGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTGCACCGGTCACAGTTCCACCAATTGTAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E331526" ref_strand="+" ref_description="SGN-E331526 [cTOD-9-O20]">
      <seq>cttttcattcctatgcttggcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15220" stop="16353"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15520" g_stop="16053" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="534" r_length="534" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E331526" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15520" e_stop="16053"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGG</genome_strand>
        <mrna_strand>CTTTTCATTCCTATGCTTGGCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E269120" ref_strand="+" ref_description="SGN-E269120 [cLEI-16-I7]">
      <seq>ttcatttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15223" stop="16508"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15523" g_stop="16208" g_length="686"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="686" r_length="686" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E269120" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>686</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E269120" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15523" e_stop="16208"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTA</genome_strand>
        <mrna_strand>TTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E290507" ref_strand="+" ref_description="SGN-E290507 [cLES-20-K17]">
      <seq>tttctatgcttttcctttcttcattcactcccattcttggatgtggctattgtggtaaaccttctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaacccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15227" stop="16392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15527" g_stop="16092" g_length="566"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="564" r_length="564" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E290507" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15527" e_stop="16092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGC</genome_strand>
        <mrna_strand>TTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAA-C-CCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E295096" ref_strand="+" ref_description="SGN-E295096 [cLET-40-O3]">
      <seq>tctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15289" stop="16369"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15589" g_stop="16069" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="481" r_length="481" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E295096" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295096" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15589" e_stop="16069"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTT</genome_strand>
        <mrna_strand>TCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E289449" ref_strand="+" ref_description="SGN-E289449 [cLET-3-D4]">
      <seq>tctcacaagcccaaaaagcccaaagttcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaaatgccacctatcgggatttcaccaatcgtaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15289" stop="16069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15589" g_stop="15769" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="181" r_length="181" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E289449" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>181</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15589" e_stop="15769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAAC</genome_strand>
        <mrna_strand>TCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAAATGCCACCTATCGGGATTTCACCAATCGTAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E297915" ref_strand="+" ref_description="SGN-E297915 [cLET-38-M8]">
      <seq>tcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15315" stop="16533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15615" g_stop="16233" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="619" r_length="619" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E297915" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>619</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E297915" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15615" e_stop="16233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTT</genome_strand>
        <mrna_strand>TCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E296460" ref_strand="+" ref_description="SGN-E296460 [cLET-19-H3]">
      <seq>tcccactcccattgtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15315" stop="16517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15615" g_stop="16217" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="603" r_length="603" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E296460" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296460" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15615" e_stop="16217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCT</genome_strand>
        <mrna_strand>TCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E203265" ref_strand="+" ref_description="SGN-E203265 [cLEB-3-G22]">
      <seq>gcacgaggtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15328" stop="16481"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15621" g_stop="16181" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E203265" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15621" e_stop="16181"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAA</genome_strand>
        <mrna_strand>GCACGAGGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E277275" ref_strand="+" ref_description="SGN-E277275 [cLEL-3-O6]">
      <seq>gcacgaggtcaaaccccctgtcgatttgccccctatcggaattccaccaatcgtgaaaccacctgttaattcgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15328" stop="16245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15621" g_stop="15945" g_length="325"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="325" r_length="325" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E277275" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>325</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E277275" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15621" e_stop="15945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGA</genome_strand>
        <mrna_strand>GCACGAGGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTCGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E732772" ref_strand="+" ref_description="SGN-E732772 [LB03AD08]">
      <seq>accccctgacgatttgccctctatcggaattccaccaatcgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcggaaaaccgcccgtcatattgccacctgtcggaattccacaattcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgtatgatttgccacctgttgggattccaccggtcacagttcctccaattgtaaaacctcaagttgatttgccacctattggaattccaccagtcacagttccacgagtaattaatccatcacttaaagggtaaaaaccttgtccaccaacatcaaaggcaacatgcccacttgacacattgaaacttggggcttgtgtggatcttttatgagggcttgatcatattggcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15333" stop="16394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15633" g_stop="16094" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="463" r_length="463" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E732772" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>462</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E732772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15633" e_stop="16094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGT-TGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCT</genome_strand>
        <mrna_strand>ACCCCCTGACGATTTGCCCTCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGGAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACAATTCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTATGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCTCCAATTGTAAAACCTCAAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACGAGTAATTAATCCATCACTTAAAGGGTAAAAACCTTGTCCACCAACATCAAAGGCAACATGCCCACTTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTATGAGGGCTTGATCATATTGGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E284985" ref_strand="+" ref_description="SGN-E284985 [cLER-19-M3]">
      <seq>ggaattccaccattcgtgaaactcacctgttaatttgccccctaggcggaattgcaccgatcgtaaaaccaccactcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaaccaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15358" stop="16394"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15658" g_stop="16094" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E284985" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15658" e_stop="16094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTCCACCAATCGTGAAAC-CACCTGTTAATTTGCCCCCTA-TCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAA-CAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCT</genome_strand>
        <mrna_strand>GGAATTCCACCATTCGTGAAACTCACCTGTTAATTTGCCCCCTAGGCGGAATTGCACCGATCGTAAAACCACCACTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACCAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E733593" ref_strand="+" ref_description="SGN-E733593 [LB10BG03]">
      <seq>cgtgaaaccacctgttaatttgccccctatcggaattccaccgatcgtaaaaccaccagtcaaattgccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15372" stop="17368"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15672" g_stop="16281" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="610" r_length="610" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17070" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="808" r_length="198" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E733593" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15672" e_stop="16281"/>
          <exon e_start="16873" e_stop="17070"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGT</genome_strand>
        <mrna_strand>CGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E347830" ref_strand="+" ref_description="SGN-E347830 [cTOF-26-J4]">
      <seq>gccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttgaggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaattgcatggattgccatgaaacgatgtccaatttatgattta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15438" stop="17238"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15738" g_stop="16281" g_length="544"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="544" r_length="544" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="16938" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="609" r_length="65" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E347830" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E347830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15738" e_stop="16281"/>
          <exon e_start="16873" e_stop="16938"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTA</genome_strand>
        <mrna_strand>GCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGAGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAG-AATTGCATGGATTGCCATGAAACGATGTCCAATTTATGATTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E747154" ref_strand="+" ref_description="SGN-E747154 [GI|11139237]">
      <seq>gccacctatcggaattccaccaatcgtaaaaccgcccgtcatattgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctacaaaatctatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15438" stop="16511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15738" g_stop="16211" g_length="474"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="475" r_length="475" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E747154" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15738" e_stop="16211"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCT-CAAAATCTATGT</genome_strand>
        <mrna_strand>GCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTACAAAATCTATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E291143" ref_strand="+" ref_description="SGN-E291143 [cLET-8-P19]">
      <seq>ttgccacctgtcggaattccaccaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15481" stop="17186"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15781" g_stop="16281" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="501" r_length="501" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="16886" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="502" r_stop="515" r_length="14" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E291143" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>515</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E291143" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15781" e_stop="16281"/>
          <exon e_start="16873" e_stop="16886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAA</genome_strand>
        <mrna_strand>TTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E737860" ref_strand="+" ref_description="SGN-E737860 [LC11CA05]">
      <seq>cactaatcgtaaaaccacctgtcaaattgccacctgtcggaattccaccaatcgtaaaaccacctgtaggatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15500" stop="17345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15800" g_stop="16281" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="483" r_length="483" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17060" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="671" r_length="188" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E737860" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E737860" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15800" e_stop="16281"/>
          <exon e_start="16873" e_stop="17060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGT-TGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTA</genome_strand>
        <mrna_strand>CACTAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTAGGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E737722" ref_strand="+" ref_description="SGN-E737722 [LC11AA05]">
      <seq>tcggaattccaccaatcgtaaaaccacctgttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgcattttatgcattgttttatcttggctttgtggaattgttatttaatggaattattattattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15536" stop="17340"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15836" g_stop="16281" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="446" r_length="446" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17040" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="447" r_stop="614" r_length="168" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E737722" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>614</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E737722" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15836" e_stop="16281"/>
          <exon e_start="16873" e_stop="17040"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTAT</genome_strand>
        <mrna_strand>TCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGCATTTTATGCATTGTTTTATCTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E344006" ref_strand="+" ref_description="SGN-E344006 [cTOF-12-M24]">
      <seq>ttgatttgccacctgttgggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaacttcttggtac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15566" stop="16538"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15866" g_stop="16238" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="373" r_length="373" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E344006" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E344006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15866" e_stop="16238"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTAC</genome_strand>
        <mrna_strand>TTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTTCTTGGTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E278879" ref_strand="+" ref_description="SGN-E278879 [cLER-2-C9]">
      <seq>gggattccaccggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaattttcttccaccccaccccacccctcaaaaatggnatttatgtattggtttattttggctttgtggaattgttatttaatggaaatattattattattatcattattactattattattaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15583" stop="17363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15883" g_stop="16281" g_length="399"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="399" r_length="399" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17068" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="400" r_stop="595" r_length="196" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E278879" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278879" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15883" e_stop="16281"/>
          <exon e_start="16873" e_stop="17068"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCA</genome_strand>
        <mrna_strand>GGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTTCTTCCACCCCACCCCACCCCTCAAAAATGGNATTTATGTATTGGTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAAATATTATTATTATTATCATTATTACTATTATTATTAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E323211" ref_strand="+" ref_description="SGN-E323211 [cTOB-28-O3]">
      <seq>accggtcacagttccaccaattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15591" stop="17261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15891" g_stop="16281" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="391" r_length="391" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="16961" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="392" r_stop="480" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E323211" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>480</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E323211" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15891" e_stop="16281"/>
          <exon e_start="16873" e_stop="16961"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCC</genome_strand>
        <mrna_strand>ACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E295172" ref_strand="+" ref_description="SGN-E295172 [cLET-20-J7]">
      <seq>caattgtaaaaccttcagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15608" stop="17202"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15908" g_stop="16281" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="16902" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="404" r_length="30" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E295172" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15908" e_stop="16281"/>
          <exon e_start="16873" e_stop="16902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCA</genome_strand>
        <mrna_strand>CAATTGTAAAACCTTCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E296947" ref_strand="+" ref_description="SGN-E296947 [cLET-26-J15]">
      <seq>aattgtaaaacctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtgcaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15609" stop="17206"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15909" g_stop="16281" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="373" r_length="373" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="16906" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="407" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E296947" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E296947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15909" e_stop="16281"/>
          <exon e_start="16873" e_stop="16906"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGA</genome_strand>
        <mrna_strand>AATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTGCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E300603" ref_strand="+" ref_description="SGN-E300603 [cLET-45-O8]">
      <seq>acctccagttgatttgccacctattgtaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctttncaccccaccccacccctcaaaaatggattttatgtattggattattttggctttgtggaattgttatttaatgcgaatattattattattatcattattactattattattatttcaatggatcgtttgaatgtcatgtttcaatgaattgggaaaaaaaaaacaagtattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15618" stop="17425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15918" g_stop="16281" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17125" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="617" r_length="253" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E300603" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E300603" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15918" e_stop="16281"/>
          <exon e_start="16873" e_stop="17125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAACAAGTATTTTT</genome_strand>
        <mrna_strand>ACCTCCAGTTGATTTGCCACCTATTGTAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTTTNCACCCCACCCCACCCCTCAAAAATGGATTTTATGTATTGGATTATTTTGGCTTTGTGGAATTGTTATTTAATGCGAATATTATTATTATTATCATTATTACTATTATTATTATTTCAATGGATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAACAAGTATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E293072" ref_strand="+" ref_description="SGN-E293072 [cLET-12-E24]">
      <seq>acctccagttgatttgccacctattggaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattgggaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15618" stop="17413"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15918" g_stop="16281" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="364" r_length="364" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17113" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="365" r_stop="605" r_length="241" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E293072" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E293072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15918" e_stop="16281"/>
          <exon e_start="16873" e_stop="17113"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAA</genome_strand>
        <mrna_strand>ACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E292771" ref_strand="+" ref_description="SGN-E292771 [cLET-11-L12]">
      <seq>gaattccaccagtcacagttccaccagtaattaaaccatcacctaaagggaaaaaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15644" stop="17245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15944" g_stop="16281" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="16945" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="411" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E292771" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>411</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E292771" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15944" e_stop="16281"/>
          <exon e_start="16873" e_stop="16945"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATT</genome_strand>
        <mrna_strand>GAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E287492" ref_strand="+" ref_description="SGN-E287492 [cLES-9-E8]">
      <seq>aaaccttgtccaccaacaacaaaggcaacatgcccaattgacacattgaaacttggggcttgtgtggatcttttaggtgggcttgttcatattggccttggtgatccagctgttaatgaatgttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattatttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15697" stop="17284"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15997" g_stop="16281" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="285" r_length="285" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="16984" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="286" r_stop="397" r_length="112" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E287492" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>397</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E287492" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15997" e_stop="16281"/>
          <exon e_start="16873" e_stop="16984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTAT</genome_strand>
        <mrna_strand>AAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTATTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E440118" ref_strand="+" ref_description="SGN-E440118 [cSTA-15-I1]">
      <seq>agtgtagccaggtggtggactctttcccaagtaacaaggagttgaagtgcaagaggtacatagattttaaggttaagtagtttgactttaagtgttgtgcaaaggcaagcagcagcttcaagttcaacaagcccactaagtattggacaacattcattaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16569" stop="15808"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16269" g_stop="16108" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="161" r_length="161" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E440118" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>162</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E440118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16269" e_stop="16108"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGTAGCCAGGTGGTGGACTCTTTCCACAAGTAACAAGGAGTTGAAGTGCTAGAGGTACATAGATTTTGAGGTTAAGTAATTTGACTTTAAGTGTTGTGCAAAGGCAAGCAGCAGCTTCAAGTTCAACAAGCCCACTAAGTATTGGACAACATTCATTAAC</genome_strand>
        <mrna_strand>AGTGTAGCCAGGTGGTGGACTCTTTCC-CAAGTAACAAGGAGTTGAAGTGCAAGAGGTACATAGATTTTAAGGTTAAGTAGTTTGACTTTAAGTGTTGTGCAAAGGCAAGCAGCAGCTTCAAGTTCAACAAGCCCACTAAGTATTGGACAACATTCATTAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E289937" ref_strand="+" ref_description="SGN-E289937 [cLET-9-F23]">
      <seq>ttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15819" stop="17345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16119" g_stop="16281" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17054" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="345" r_length="182" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E289937" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>345</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E289937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16119" e_stop="16281"/>
          <exon e_start="16873" e_stop="17054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTA</genome_strand>
        <mrna_strand>TTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E294599" ref_strand="+" ref_description="SGN-E294599 [cLET-22-L21]">
      <seq>ttgtccaatacttagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15819" stop="17345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16119" g_stop="16281" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17054" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="345" r_length="182" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E294599" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>345</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16119" e_stop="16281"/>
          <exon e_start="16873" e_stop="17054"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTA</genome_strand>
        <mrna_strand>TTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E225419" ref_strand="-" ref_description="SGN-E225419 [cLEL-17-I9]">
      <seq>tagtgggcttgttgaacttgaagctgctgcttgcctttgcacaacacttaaagtcgaattacttaccctcaaaatctatgtacctcaagcccttcaactccttgttacttgtggaaagagtcccccccctggctacacttgttccatcaaggtttccaatttgaaatttgaagaaattgcattcattgccatgaaaggatgtcccatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgaaatgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattggaaaaaaaaaaaacaagtatttttttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15831" stop="17430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16131" g_stop="16281" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17129" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="409" r_length="258" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="410" polyA_stop="437"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E225419" ref_strand="-">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.934" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225419" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16131" e_stop="16281"/>
          <exon e_start="16873" e_stop="17129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGG-GAAAAAAAAAACAAGTATTTTTTTCA</genome_strand>
        <mrna_strand>TAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCGAATTACTTACCCTCAAAATCTATGTACCTCAAGCCCTTCAACTCCTTGTTACTTGTGGAAAGAGTCCCCCCCCTGGCTACACTTGTTCCATCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATTTGAAATTTGAAGAAATTGCATTCATTGCCATGAAAGGATGTCCCATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGAAATGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGAAAAAAAAAAAACAAGTATTTTTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E218176" ref_strand="-" ref_description="SGN-E218176 [cLEL-23-N14]">
      <seq>aacacttaaagtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattgggaaaaaaaaaacaagtatttttttcaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15873" stop="17430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16173" g_stop="16281" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17129" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="366" r_length="257" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="367" polyA_stop="384"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E218176" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>366</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E218176" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16173" e_stop="16281"/>
          <exon e_start="16873" e_stop="17129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAACAAGTATTTTTTTCA</genome_strand>
        <mrna_strand>AACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAACAAGTATTTTTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E232348" ref_strand="-" ref_description="SGN-E232348 [cLEL-5-B22]">
      <seq>tcggtcaaattacttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15883" stop="17345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16180" g_stop="16281" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17044" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="274" r_length="172" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="275" polyA_stop="291"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E232348" ref_strand="-">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>274</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E232348" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16180" e_stop="16281"/>
          <exon e_start="16873" e_stop="17044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATC</genome_strand>
        <mrna_strand>TCGGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E238764" ref_strand="-" ref_description="SGN-E238764 [cLEL-9-N3]">
      <seq>aagtcaaattacttaacctcaaaatctatgtacctttagcacttcaactccttgttacttgtggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtcccatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattggaaaaaaaaaaaccaagtatttttttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15881" stop="17430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16181" g_stop="16281" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17129" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="359" r_length="258" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="360" polyA_stop="387"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E238764" ref_strand="-">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238764" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16181" e_stop="16281"/>
          <exon e_start="16873" e_stop="17129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAA-CAAGTATTTTTTTCA</genome_strand>
        <mrna_strand>AAGTCAAATTACTTAACCTCAAAATCTATGTACCTTTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCCATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGAAAAAAAAAAACCAAGTATTTTTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E226545" ref_strand="-" ref_description="SGN-E226545 [cLEL-26-I14]">
      <seq>cttaacctcaaaatctatgtacctctagcacttcaactccttgttacttgtggaaaaagtcccccacctggctacacttgttccatataggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattggaaaaaaaaaaaacaagtatttttttcaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15892" stop="17430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16192" g_stop="16281" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="90" r_length="90" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17129" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="91" r_stop="348" r_length="258" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="349" polyA_stop="375"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E226545" ref_strand="-">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>347</cumulative_length_of_scored_exons>
        <coverage percentage="0.925" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226545" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16192" e_stop="16281"/>
          <exon e_start="16873" e_stop="17129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGG-GAAAAAAAAAACAAGTATTTTTTTCA</genome_strand>
        <mrna_strand>CTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAAAGTCCCCCACCTGGCTACACTTGTTCCATATAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGAAAAAAAAAAAACAAGTATTTTTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E238995" ref_strand="-" ref_description="SGN-E238995 [cLEL-9-N3]">
      <seq>ttcaactccttgtacttgtggaaagagtcccccccctggctacacttgttccatctaggtttcccatctgaaatttgaagaaattgcatggattgccatgaaaggatgtcccatttatgatttatttaattttctctccacccccccccccccccaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatccttattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattggaaaaaaaaaaaacaagtatttttttccaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15923" stop="17430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16223" g_stop="16281" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.949"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17129" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="316" r_length="258" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="317" polyA_stop="344"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E238995" ref_strand="-">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="0.919" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238995" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16223" e_stop="16281"/>
          <exon e_start="16873" e_stop="17129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAA-TTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGG-GAAAAAAAAAACAAGTATTTTTTTCA</genome_strand>
        <mrna_strand>TTCAACTCCTTG-TACTTGTGGAAAGAGTCCCCCCCCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCCATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCCATTTATGATTTATTTAATTTTCTCTCCACCCC-CCCCCCCCCCCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCCTTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGAAAAAAAAAAAACAAGTATTTTTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E225273" ref_strand="-" ref_description="SGN-E225273 [cLEL-17-I9]">
      <seq>tcaactccatgttacttgtggaaaaagtcccccccctggctacacttgttccatctaggtttcccatctgaaatttgaaaaaaatgcatggattgccatgaaaggatgtcccaattatgatttatttaatttctttccaccccaccccacccctcaaaaatggattttatggattgttttaatttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtggatcgtttgaatgtcatgtttcaatgaattggaaaaaaaaaaaacaagtatttttttccaaaaaaccaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15924" stop="27918"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16224" g_stop="16281" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17131" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="318" r_length="260" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17132" i_stop="18605" i_length="1474">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.517" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="18606" g_stop="18631" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="344" r_length="26" r_score="0.615"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E225273" ref_strand="-">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>343</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E225273" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16224" e_stop="16281"/>
          <exon e_start="16873" e_stop="17131"/>
          <exon e_start="18606" e_stop="18631"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGG-GAAAAAAAAAACAAGTATTTTTTTCAATGTTTTAGTGGTCTTATTTGAAAATTTTAATTTTGTTTAATTTTAAAAGTTTATTGTATTAATCATTGGTTTGGTTTGTATTTTTAGGGAAATTATATGGACAAATTGTTCATAGAGTTGTTTATGAGTCATCTACCCCGTATCGATCTACATAAACCTAAACAAATCTCATCTTGTTCCCGTCCTGTTGCCATTTCTACTGATGACACAAAATTTAATTGATTATTATTGTACAATTTTTTATTTTTTATTTTATTTAAGTCAAATACACGTAAAATAACAAAATCATCTTTTTTAAGAACTGATATGAAATTTAGGGCAACTATATGGTCTTATTGTTTATAAAGTTGCTAAAAATATTTTGACTCATCCAAGCCTAAACTCATCTTGCTCCGGAAAAAATTTTAATGTATTTTTTATTTATTTTAATAAAAGAATTAACTTTAAATTAAGTTAAGGTGTCGAGAAGTTATAATATTAAAGGATAAAATATGAATGCCAAGATTAATTTTTAAAAAAAAAGTATCAATATTCTTTGGGAATAAATTAAAAGAAAAACATATCGCATAAAATGAGATATTTTTTATTTATTTTTTTAAAAAAAAAGATATTAATGATTTGAAAATCGTAACTTCATTATAACAAACTTGGATTTTTTTTTAAAAAAAAAAAAGATAAATTGGACCATAACATTTTGAAGATATTATTGACTGAACCAAACAATATAGTCCATATAATATTTCCAAATACTCGAATAAGGAATCACTAAGTAAAACTGTAGAAACCTTGAGTATCGAATATTTATATTGAGGTCTGATGAGTAAAATTATAGAAATCTTGAGTATCGAATATTTATATTGAAGTCTGATGAAATTCATATTTATGGTACGAAATTTGATATTAGGATAAAGTTCTCACAACAAAAGCAATTTTATACTCGAAACTCAAATCTATGATCATTTAATTAATAATGAAGAAGTATTTATCATTCTGCTTTTAATCGTTATTAGTTTGATGAGCACTTCCAGTTTCCATATCATGTCACTTCATATTGCAATTGACAAGAATGTTAACTTTTATCTTGTTTAAATCCTAAAAGAGTTCAACTTTTGTAGACATTATAAAAGAAAATTTACTAAAATTATTGATACGATACTAGTATCAATGGTTGATTCCACAGCCTCGAGCCTCAATGACCCAAGCACAAAACTAAAATGACCCTAGATGGGAAAATATTAACAGCATGTTATCATATCGCAAAAGTAAAAATTCCTATGTTGAACCCAGACATGTTTTGAATTGAGGCATAGTTATCGTTAAAAAACATAACATAAAAAATGCAGCTAAAATAACAATTTTATACCAAGAAAATAAACTCTATAATGCAAGGCAATATAGAACATAGATAGGCAATACAACTGTATAAACATATACTCATATCATGCACCAGATTAAAACTGCTTTCATGCATTCAGACATCAACGAAAAAAGACATCGAAAA</genome_strand>
        <mrna_strand>TCAACTCCATGTTACTTGTGGAAAAAGTCCCCCCCCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCCATCTGAAATTTGAAAAAAATGCATGGATTGCCATGAAAGGATGTCCCAATTATGATTTATTTAATTTCTTTCCACCCCACCCCACCCCTCAAAAATGGATTTTATGGATTGTTTTAATTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGGATCGTTTGAATGTCATGTTTCAATGAATTGGAAAAAAAAAAAACAAGTATTTTTTTCCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAACCAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E226409" ref_strand="-" ref_description="SGN-E226409 [cLEL-26-I14]">
      <seq>cttgttacttgtggaaaaagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaaaaaattgcatggattgccataaaagaatgtcccaattatgatttatttaatttctntccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattggaaaaaaaaaaaacaagtatttttttccaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15931" stop="17430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16231" g_stop="16281" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="51" r_length="51" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17129" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="52" r_stop="309" r_length="258" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="310" polyA_stop="336"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E226409" ref_strand="-">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E226409" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16231" e_stop="16281"/>
          <exon e_start="16873" e_stop="17129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGG-GAAAAAAAAAACAAGTATTTTTTTCA</genome_strand>
        <mrna_strand>CTTGTTACTTGTGGAAAAAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAAAAATTGCATGGATTGCCATAAAAGAATGTCCCAATTATGATTTATTTAATTTCTNTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGAAAAAAAAAAAACAAGTATTTTTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E538689" ref_strand="-" ref_description="SGN-E538689 [TUS-58-A24]">
      <seq>tggaaagagtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctctccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattgggaaaaaaaaacacaagtatttttttcaatgttttagtggtcttatttgaaaattttaattttgtttaattttaaaaaaaaaaaaaaaaaaactcgagacctgcagcccggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15942" stop="27919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16242" g_stop="16281" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17178" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="347" r_length="307" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17179" i_stop="17794" i_length="616">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17795" g_stop="17831" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="348" r_stop="384" r_length="37" r_score="0.541"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E538689" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E538689" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16242" e_stop="16281"/>
          <exon e_start="16873" e_stop="17178"/>
          <exon e_start="17795" e_stop="17831"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAA-ACAAGTATTTTTTTCAATGTTTTAGTGGTCTTATTTGAAAATTTTAATTTTGTTTAATTTTAAAAGTTTATTGTATTAATCATTGGTTTGGTTTGTATTTTTAGGGAAATTATATGGACAAATTGTTCATAGAGTTGTTTATGAGTCATCTACCCCGTATCGATCTACATAAACCTAAACAAATCTCATCTTGTTCCCGTCCTGTTGCCATTTCTACTGATGACACAAAATTTAATTGATTATTATTGTACAATTTTTTATTTTTTATTTTATTTAAGTCAAATACACGTAAAATAACAAAATCATCTTTTTTAAGAACTGATATGAAATTTAGGGCAACTATATGGTCTTATTGTTTATAAAGTTGCTAAAAATATTTTGACTCATCCAAGCCTAAACTCATCTTGCTCCGGAAAAAATTTTAATGTATTTTTTATTTATTTTAATAAAAGAATTAACTTTAAATTAAGTTAAGGTGTCGAGAAGTTATAATATTAAAGGATAAAATATGAATGCCAAGATTAATTTTTAAAAAAAAAGTATCAATATTCTTTGGGAATAAATTAAAAGAAAAACATATCGCATAAAATGAGATATTTTTTATTTATTTTTTTAAAAAAAAAGATATTAATGATTTGAAAATCGTAACTTCATTATAACAAACTTGGATTTTTTTTTAAAAAAAAAAAAGATAAATTGGACCATAACATTTTGAAGA</genome_strand>
        <mrna_strand>TGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAACACAAGTATTTTTTTCAATGTTTTAGTGGTCTTATTTGAAAATTTTAATTTTGTTTAATTTTAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAACTCGAGACCTGCAGCCCGGGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E279633" ref_strand="-" ref_description="SGN-E279633 [cLER-5-M11]">
      <seq>gtccaccacctggctacacttgttccatctaggtttccaatctgaaatttgaagaaattgcatggattgccatgaaaggatgtccaatttatgatttatttaatttctgtccaccccaccccacccctcaaaattgtattttatgtattgttttattttggctttgtggaattgttatttaatggaattattattattattatcattattactattattattatttcagtgtatcgtttgaatgtcatgtttcaatgaattgggaaaaaaaaaacaagtatttttttcaatgttttagtggtcttatttgaaaattttaattttgtttaattttaaaaaaaaaaaaaaaaaaactcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15950" stop="27919"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16250" g_stop="16281" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="32" r_length="32" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16873" g_stop="17178" g_length="306"/>
          <reference_exon_boundary r_type="cDNA" r_start="33" r_stop="338" r_length="306" r_score="0.997"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="17179" i_stop="17794" i_length="616">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="17795" g_stop="17815" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="359" r_length="21" r_score="0.762"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E279633" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>359</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279633" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16250" e_stop="16281"/>
          <exon e_start="16873" e_stop="17178"/>
          <exon e_start="17795" e_stop="17815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCCACCACCTGGCTACACTTGTTCCATCTAGGTAATTATAACTTTTCCTCCTCTATTTTTTCACTCGGTATCTGGTACTCGCTTTGCTACCCAACCAATGATCGATAAAGCCTCAAAAAAACGAAGGGTGCTTAGTTATTAAACACCCGTCGTACTACTGTTTAAACATGCTTAGTAAAATTTATGATTTTCACCATCTGACCTGACTAATTTAAATTAGAGGTGAGGTAACGCGACTTCATTTTTAGTGTCGAATATGAAGTCTATAGTTACTTAGGTCCCCATCTTTATTGGTTATTAAGTAAATTTATGTATAGATATTAATTGATAACCTGATAAAAATGATATATATAATTAGTTACTTGTTATTACATATTAACAAATATAGATAATATAGAAATATATTAAACCTGATTTTACCTTGAATTTTAAATCTAAACTTGCGTTGTTATTCATTTGGTCTCTCAGAAAGGGAAAAAAAAGAATAAGATACGAAATTTGCTGCTAATCTATCGCGAAATGAAACATATATTTTTTAATAATTCGTTAGTAACTAGGATTAGCTACGTATTTTTATTGTTAATTAAACTTATTATTAATTTAAATTCTGATTAAATTGCAGGTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAACAAGTATTTTTTTCAATGTTTTAGTGGTCTTATTTGAAAATTTTAATTTTGTTTAATTTTAAAAGTTTATTGTATTAATCATTGGTTTGGTTTGTATTTTTAGGGAAATTATATGGACAAATTGTTCATAGAGTTGTTTATGAGTCATCTACCCCGTATCGATCTACATAAACCTAAACAAATCTCATCTTGTTCCCGTCCTGTTGCCATTTCTACTGATGACACAAAATTTAATTGATTATTATTGTACAATTTTTTATTTTTTATTTTATTTAAGTCAAATACACGTAAAATAACAAAATCATCTTTTTTAAGAACTGATATGAAATTTAGGGCAACTATATGGTCTTATTGTTTATAAAGTTGCTAAAAATATTTTGACTCATCCAAGCCTAAACTCATCTTGCTCCGGAAAAAATTTTAATGTATTTTTTATTTATTTTAATAAAAGAATTAACTTTAAATTAAGTTAAGGTGTCGAGAAGTTATAATATTAAAGGATAAAATATGAATGCCAAGATTAATTTTTAAAAAAAAAGTATCAATATTCTTTGGGAATAAATTAAAAGAAAAACATATCGCATAAAATGAGATATTTTTTATTTATTTTTTTAAAAAAAAAGATATTAATGATTTGAAAATCGTAACTTCATTATAACAAACTTGGATTTTTTTTTAAAAAAAAAAAAGATAAATTGGAC</genome_strand>
        <mrna_strand>GTCCACCACCTGGCTACACTTGTTCCATCTAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTGTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAACAAGTATTTTTTTCAATGTTTTAGTGGTCTTATTTGAAAATTTTAATTTTGTTTAATTTTAAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAACTCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E200186" ref_strand="+" ref_description="SGN-E200186 [cLEB-7-H16]">
      <seq>gcacgagattgaaacatgacattcaaacgatacactgaaataataataatagtaataatgataataataataataattccattaaataacaattccacaaagccaaaataaaacaatacataaaatacaattttgaggggtggggtggggtggagagaaattaaataaatcataaattggacatcctttcatggcaatccatgcaatttcttcaaatttcagattggaaacctgcaatttaatcagaatttaaattaataataagtttaattaacaataaaaatacgtagctaatcctagttactaacgaattattaaaaaatatatgtttcatttcgcgatagataagcagcaaatatcgtatctaattctttattttccctttctgagagaaccaaatgaataacaacgcaagtttagatttaaaattcaaggtaaaatcaagttcaatatatatctatattaatctatattagttaatatgtaataacaagtaactaaattatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="17396" stop="16299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17103" g_stop="16599" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="508" r_length="508" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E200186" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200186" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17103" e_stop="16599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAATTCATTGAAACATGACATTCAAACGATACACTGAAATAATAATAATAGTAATAATGATAATAATAATAATAATTCCATTAAATAACAATTCCACAAAGCCAAAATAAAACAATACATAAAATACAATTTTGAGGGGTGGGGTGGGGTGGAGAGAAATTAAATAAATCATAAATTGGACATCCTTTCATGGCAATCCATGCAATTTCTTCAAATTTCAGATTGGAAACCTGCAATTTAATCAGAATTTAAATTAATAATAAGTTTAATTAACAATAAAAATACGTAGCTAATCCTAGTTACTAACGAATTATTAAAAAATATATGTTTCATTTCGCGATAGATTAGCAGCAAATTTCGTATCTTATTCTTTTTTTTCCCTTTCTGAGAG-ACCAAATGAATAACAACGCAAGTTTAGATTTAAAATTCAAGGTAAAATCAGGTTTAATATATTTCTATATT-ATCTATATTTGTTAATATGTAATAACAAGTAACT-AATTATAT</genome_strand>
        <mrna_strand>GCACGAGATTGAAACATGACATTCAAACGATACACTGAAATAATAATAATAGTAATAATGATAATAATAATAATAATTCCATTAAATAACAATTCCACAAAGCCAAAATAAAACAATACATAAAATACAATTTTGAGGGGTGGGGTGGGGTGGAGAGAAATTAAATAAATCATAAATTGGACATCCTTTCATGGCAATCCATGCAATTTCTTCAAATTTCAGATTGGAAACCTGCAATTTAATCAGAATTTAAATTAATAATAAGTTTAATTAACAATAAAAATACGTAGCTAATCCTAGTTACTAACGAATTATTAAAAAATATATGTTTCATTTCGCGATAGATAAGCAGCAAATATCGTATCTAATTCTTTATTTTCCCTTTCTGAGAGAACCAAATGAATAACAACGCAAGTTTAGATTTAAAATTCAAGGTAAAATCAAGTTCAATATATATCTATATTAATCTATATTAGTTAATATGTAATAACAAGTAACTAAATTATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E349037" ref_strand="+" ref_description="SGN-E349037 [cTOF-29-L10]">
      <seq>gtaaataccttacatgcaccaataaaaatggaagtccccatttaggttttttctgtgatgttaaatacttgtctagaatagcctttgtagctgatttctgttttctttgagactgttataacatttgtctcctccgtgtcacccgagattcgactttcttgtatcataatttggtatcagtagagacttactggagagtttagttgcgattttcgatgtcttttttcgttgatgtctgaatgcatgaaagcagttttaatctggtgcatgatatgagtatatgtttatacagttgtattgcctatctatgttctatattgccttgcattatagagtttattttcttggtataaaattgttattttagctgcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19140" stop="18169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18840" g_stop="18459" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E349037" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E349037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18840" e_stop="18459"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAATACCTTACATGCACCAATAAAAATGGAAGTCCCCATTTAGGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTGTCTCCTCCGTGTCACCCGAGATTCGACTTTCTTGTATCATAATTTGGTATCAGTAGAGACTTACTGGAGAGTTTAGTTGCGATTTTCGATGTCTTTTTTCGTTGATGTCTGAATGCATGAAAGCAGTTTTAATCTGGTGCATGATATGAGTATATGTTTATACAGTTGTATTGCCTATCTATGTTCTATATTGCCTTGCATTATAGAGTTTATTTTCTTGGTATAAAATTGTTATTTTAGCTGCATTTTTTATGT</genome_strand>
        <mrna_strand>GTAAATACCTTACATGCACCAATAAAAATGGAAGTCCCCATTTAGGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTGTCTCCTCCGTGTCACCCGAGATTCGACTTTCTTGTATCATAATTTGGTATCAGTAGAGACTTACTGGAGAGTTTAGTTGCGATTTTCGATGTCTTTTTTCGTTGATGTCTGAATGCATGAAAGCAGTTTTAATCTGGTGCATGATATGAGTATATGTTTATACAGTTGTATTGCCTATCTATGTTCTATATTGCCTTGCATTATAGAGTTTATTTTCTTGGTATAAAATTGTTATTTTAGCTGCAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E734660" ref_strand="+" ref_description="SGN-E734660 [LB13BA08]">
      <seq>ccttgttgcctcgtgttcatgagtttgacgttgttgggtggtggaaactgaacagaatgaagtacccaactctgtcaaaaatggctcgtgacatcttgtctgttccagtttctactgtaacagctgattctgtgtttagcacggtaggcaaagagatggatcgctacaggtgttccttgcgacctgagaccgtggaggccctcatttgcgccaaggattggcttcaaaatgcatcagtaaataccttacatgcaccaataaaaatggaagtccccatttaggttttttctgtgatgttaaatacttgtctagaatagcctttgtagctgatttctgttttctttgagactgttataacatttgtctcctccgtgtcacccgagattcgactttcttgtatcataatttggtatcagtagagacttactggagagtttagttgcgattttcgatgtcttttttcgttgatgtctgaatgcatgaaagcagttttaatctggtgaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19376" stop="18260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19076" g_stop="18576" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="501" r_length="501" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="503" polyA_stop="530"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E734660" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734660" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19076" e_stop="18576"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATTTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACCTTACATGCACCAATAAAAATGGAAGTCCCCATTTAGGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTGTCTCCTCCGTGTCACCCGAGATTCGACTTTCTTGTATCATAATTTGGTATCAGTAGAGACTTACTGGAGAGTTTAGTTGCGATTTTCGATGTCTTTTTTCGTTGATGTCTGAATGCATGAAAGCAGTTTTAATCTGGT</genome_strand>
        <mrna_strand>CCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATTTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACCTTACATGCACCAATAAAAATGGAAGTCCCCATTTAGGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTGTCTCCTCCGTGTCACCCGAGATTCGACTTTCTTGTATCATAATTTGGTATCAGTAGAGACTTACTGGAGAGTTTAGTTGCGATTTTCGATGTCTTTTTTCGTTGATGTCTGAATGCATGAAAGCAGTTTTAATCTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E371973" ref_strand="+" ref_description="SGN-E371973 [TUS-30-G2]">
      <seq>tttttttttaaaactgctttcatgcattcagacatcaacgaaaaaagacatcgaaaatcgcaactaaactctccagtaagtctctactgataccaaattatgatacaagaaagtcgaatctcgggtgacacggaggagacaaatgttataacagtctcaaagaaaacagaaatcagctacaaaggctattctagacaagtatttaacatcacagaaaaaacctaaatggggacttccatttttattggtgcatgtaaggtatttactgatgcattttgaagccaatccttggcgcaaatgagggcctccacggtctcaggtcgcaaggaacacctgtagcgatccatctctttgcctaccgtgctaaacacagaatcagctgttacagtagaaactggaacagacaagatgtcacgagccatttttgacagagttgggtacttcattctgttcagtttccaccacccaacaacgtcaaactcatgaacacgaggcaacaaggactcatccaaatattgatcaagttctgaccttgactgctggcttgttgtctccataatataggcatcaaaatctgtaagtccgcccccaccattctcctgcttcaaagctccatcatctacctcttcagcataagctggggtcagaggcagaggaagtgccacgtattcaaggaagagctcgtggattccctcctcaacgaacttcacaaaggtggcagcttcttcaccatatatttttgtaaagctgaattctac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="18282" stop="19632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18581" g_stop="19332" g_length="752"/>
          <reference_exon_boundary r_type="cDNA" r_start="7" r_stop="758" r_length="752" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E371973" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>752</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18581" e_stop="19332"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAAACTGCTTTCATGCATTCAGACATCAACGAAAAAAGACATCGAAAATCGCAACTAAACTCTCCAGTAAGTCTCTACTGATACCAAATTATGATACAAGAAAGTCGAATCTCGGGTGACACGGAGGAGACAAATGTTATAACAGTCTCAAAGAAAACAGAAATCAGCTACAAAGGCTATTCTAGACAAGTATTTAACATCACAGAAAAAACCTAAATGGGGACTTCCATTTTTATTGGTGCATGTAAGGTATTTACTGATGCATTTTGAAGCCAATCCTTGGCGCAAATGAGGGCCTCCACGGTCTCAGGTCGCAAGGAACACCTGTAGCGATCCATCTCTTTGCCTACCGTGCTAAACACAGAATCAGCTGTTACAGTAGAAACTGGAACAGACAAGATGTCACGAGCCATTTTTGACAGAGTTGGGTACTTCATTCTGTTCAGTTTCCACCACCCAACAACGTCAAACTCATGAACACGAGGCAACAAGGACTCATCCAAATATTGATCAAGTTCTGACCTTGACTGCTGGCTTGTTGTCTCCATAATATAGGCATCAAAATCTGTAAGTCCGCCCCCACCATTCTCCTGCTTCAAAGCTCCATCATCTACCTCTTCAGCATAAGCTGGGGTCAGAGGCAGAGGAAGTGCCACGTATTCAAGGAAGAGCTCGTGGATTCCCTCCTCAACGAACTTCACAAAGGTGGCAGCTTCTTCACCATATATTTTTGTAAAGCTGAATTCTAC</genome_strand>
        <mrna_strand>TTTAAAACTGCTTTCATGCATTCAGACATCAACGAAAAAAGACATCGAAAATCGCAACTAAACTCTCCAGTAAGTCTCTACTGATACCAAATTATGATACAAGAAAGTCGAATCTCGGGTGACACGGAGGAGACAAATGTTATAACAGTCTCAAAGAAAACAGAAATCAGCTACAAAGGCTATTCTAGACAAGTATTTAACATCACAGAAAAAACCTAAATGGGGACTTCCATTTTTATTGGTGCATGTAAGGTATTTACTGATGCATTTTGAAGCCAATCCTTGGCGCAAATGAGGGCCTCCACGGTCTCAGGTCGCAAGGAACACCTGTAGCGATCCATCTCTTTGCCTACCGTGCTAAACACAGAATCAGCTGTTACAGTAGAAACTGGAACAGACAAGATGTCACGAGCCATTTTTGACAGAGTTGGGTACTTCATTCTGTTCAGTTTCCACCACCCAACAACGTCAAACTCATGAACACGAGGCAACAAGGACTCATCCAAATATTGATCAAGTTCTGACCTTGACTGCTGGCTTGTTGTCTCCATAATATAGGCATCAAAATCTGTAAGTCCGCCCCCACCATTCTCCTGCTTCAAAGCTCCATCATCTACCTCTTCAGCATAAGCTGGGGTCAGAGGCAGAGGAAGTGCCACGTATTCAAGGAAGAGCTCGTGGATTCCCTCCTCAACGAACTTCACAAAGGTGGCAGCTTCTTCACCATATATTTTTGTAAAGCTGAATTCTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E460849" ref_strand="+" ref_description="SGN-E460849 [cPRO-33-H9]">
      <seq>agacaacaagccagcagtcaaggtcagaacttgatcaatatttggatgagtccttgttgcctcgtgttcacgagtttgacgttgttgggtggtggaaactgaacagaatgaagtacccaactctgtcaaaaatggctcgtgacatcttgtccgttccagtttctactgtaacagccgattctgtgtttagcacggtaggcaaagagatggatcgctacaggtgttccttgcgacctgagaccgtggaggccctcatctgcgccaaggattggcttcaaaatgcatcagtaaatactttacatgcaccaataaaaatggaagtcccgatttgagttttttctgtgatgttaaatacttgtctagaatagcctttgtagctgatttctgttttctttgagactgttataacatttgtctcctcctccgtgtcatccgagaatcgactttcttgtatcataatttggtatcactagagacttactggagagtttagttgcgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19427" stop="18332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19127" g_stop="18622" g_length="506"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E460849" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>506</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E460849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19127" e_stop="18622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACAACAAGCCAGCAGTCAAGGTCAGAACTTGATCAATATTTGGATGAGTCCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATTTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACCTTACATGCACCAATAAAAATGGAAGTCCCCATTTAGGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTG--T-CTCCTCCGTGTCACCCGAGATTCGACTTTCTTGTATCATAATTTGGTATCAGTAGAGACTTACTGGAGAGTTTAGTTGCGATTTTCGATGT</genome_strand>
        <mrna_strand>AGACAACAAGCCAGCAGTCAAGGTCAGAACTTGATCAATATTTGGATGAGTCCTTGTTGCCTCGTGTTCACGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCCGTTCCAGTTTCTACTGTAACAGCCGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATCTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACTTTACATGCACCAATAAAAATGGAAGTCCCGATTTGAGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTGTCTCCTCCTCCGTGTCATCCGAGAATCGACTTTCTTGTATCATAATTTGGTATCACTAGAGACTTACTGGAGAGTTTAGTTGCGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E419100" ref_strand="-" ref_description="SGN-E419100 [STM-28-P10]">
      <seq>agtccttgttgcctcgtgttcacgagtttgacgttgttgggtggtggaaactgaccagaatgaagtacccaactctgtcaaaaatggctcgtgacatcttgtccgttccagtttctactgtaacagccgattctgtgtttagcacggtaggcaaagagatggatcgctacaggtgttccttgcgacctgagaccgtggaggccctcatctgcgccaaggattggcttcaaaatgcatcagtaaatactttacatgcaccaataaaaatggaagtcccgatttgagttttttctgtgatgttaaatacttgtctagaatagcctttgtagctgatttctgttttctttgagactgttataacatttgtctcctcctccgtgtcatccgagaatcgactttcttgtatcataatttggtatcactagagacttaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19379" stop="18351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19079" g_stop="18651" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="433" polyA_stop="446"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E419100" ref_strand="-">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419100" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="19079" e_stop="18651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATTTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACCTTACATGCACCAATAAAAATGGAAGTCCCCATTTAGGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTG--T-CTCCTCCGTGTCACCCGAGATTCGACTTTCTTGTATCATAATTTGGTATCAGTAGAGACTTA</genome_strand>
        <mrna_strand>AGTCCTTGTTGCCTCGTGTTCACGAGTTTGACGTTGTTGGGTGGTGGAAACTGACCAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCCGTTCCAGTTTCTACTGTAACAGCCGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATCTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACTTTACATGCACCAATAAAAATGGAAGTCCCGATTTGAGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTGTCTCCTCCTCCGTGTCATCCGAGAATCGACTTTCTTGTATCATAATTTGGTATCACTAGAGACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E588243" ref_strand="+" ref_description="SGN-E588243 [41791]">
      <seq>gtcgattctcggatgacacggaggaggagacaaatgttataacagtctcaaagaaaacagaaatcagctacaaaggctattctaaacaagtatttaacatcacagaaaaaacttaaatcgggacttccatttttattggtgcatgtaaagtatttactgatgcattttgaagccaatccttggcgcagatgagggcctccacggtctcaggtcgcaaggaacacctgtagcgatccatctctttgcctatagtgctaaacacagaatcagctgttacagtagaaactggaacggacaagatgtcacgagccatttttgacagagttgggtacttcattctgttcagtttccaccaccccacaacgtcaaactcgtgaacacgaggcaacaaggactcatccaaatattgatcaagctctgaccttgactgctggcttgttgtctccataatgtaggcatcaaaatctgtaagtccgcccccaccattctcctgcttcaaagtcccatcatttacctcttcagcataagctggggtcagaggcagaggaagtgccacgtattcaaggaagagctcgtggattccctcctcaacgaacttcacataggtggcagcttcttcaccatatattttcgtaaaactgaattcgacaagtttcattttgaagcgtggatccattactacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="18406" stop="19666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18687" g_stop="19366" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E588243" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E588243" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18687" e_stop="19366"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAATCTCGGGTGACACGGAG---GAGACAAATGTTATAACAGTCTCAAAGAAAACAGAAATCAGCTACAAAGGCTATTCTAGACAAGTATTTAACATCACAGAAAAAACCTAAATGGGGACTTCCATTTTTATTGGTGCATGTAAGGTATTTACTGATGCATTTTGAAGCCAATCCTTGGCGCAAATGAGGGCCTCCACGGTCTCAGGTCGCAAGGAACACCTGTAGCGATCCATCTCTTTGCCTACCGTGCTAAACACAGAATCAGCTGTTACAGTAGAAACTGGAACAGACAAGATGTCACGAGCCATTTTTGACAGAGTTGGGTACTTCATTCTGTTCAGTTTCCACCACCCAACAACGTCAAACTCATGAACACGAGGCAACAAGGACTCATCCAAATATTGATCAAGTTCTGACCTTGACTGCTGGCTTGTTGTCTCCATAATATAGGCATCAAAATCTGTAAGTCCGCCCCCACCATTCTCCTGCTTCAAAGCTCCATCATCTACCTCTTCAGCATAAGCTGGGGTCAGAGGCAGAGGAAGTGCCACGTATTCAAGGAAGAGCTCGTGGATTCCCTCCTCAACGAACTTCACAAAGGTGGCAGCTTCTTCACCATATATTTTTGTAAAGCTGAATTCTACAAGTTTCATTTTGAAGCGTGGATCCATTACAACG</genome_strand>
        <mrna_strand>GTCGATTCTCGGATGACACGGAGGAGGAGACAAATGTTATAACAGTCTCAAAGAAAACAGAAATCAGCTACAAAGGCTATTCTAAACAAGTATTTAACATCACAGAAAAAACTTAAATCGGGACTTCCATTTTTATTGGTGCATGTAAAGTATTTACTGATGCATTTTGAAGCCAATCCTTGGCGCAGATGAGGGCCTCCACGGTCTCAGGTCGCAAGGAACACCTGTAGCGATCCATCTCTTTGCCTATAGTGCTAAACACAGAATCAGCTGTTACAGTAGAAACTGGAACGGACAAGATGTCACGAGCCATTTTTGACAGAGTTGGGTACTTCATTCTGTTCAGTTTCCACCACCCCACAACGTCAAACTCGTGAACACGAGGCAACAAGGACTCATCCAAATATTGATCAAGCTCTGACCTTGACTGCTGGCTTGTTGTCTCCATAATGTAGGCATCAAAATCTGTAAGTCCGCCCCCACCATTCTCCTGCTTCAAAGTCCCATCATTTACCTCTTCAGCATAAGCTGGGGTCAGAGGCAGAGGAAGTGCCACGTATTCAAGGAAGAGCTCGTGGATTCCCTCCTCAACGAACTTCACATAGGTGGCAGCTTCTTCACCATATATTTTCGTAAAACTGAATTCGACAAGTTTCATTTTGAAGCGTGGATCCATTACTACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E343349" ref_strand="+" ref_description="SGN-E343349 [cTOF-19-A19]">
      <seq>ctctttgacactgccaatcttctgactgcaccaacaattccaacaaccaacacattcttccatgaagcatggaagattcaattggaactggctcgtgctgcagcaagtgaagatccatccataagcggtcttaccaaaacaatgcaagaggagtttgataaatactggaagagttgttgtctaatattagctattgccgttgtaatggatccacgcttcaaaatgaaacttgtagaattcagctttacaaaaatatatggtgaagaagctgccacctttgtgaagttcgttgaggagggaatccacgagctcttccttgaatacgtggcacttcctctgcctctgaccccagcttatgctgaagaggtagatgatggagctttgaagcaggagaatggtgggggcggacttacagattttgatgcctatattatggagacaacaagccagcagtcaaggtcagaacttgatcaatatttggatgagtccttgttgcctcgtgttcatgagtttgacgttgttgggtggtggaaactgaacagaatgaagtacccaactctgtcaaaaatgggctcgtgacatcttgtctgttccagtttctactgtaacagctgnattctgtgtttagcacggtaggcaaagaaatggatcngctacangtgttccttgcgacctgagaccgtggaggccctcatttgcgcccaggattggcttcaaatgcatcagtaaataccttacatgcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19863" stop="18521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19563" g_stop="18821" g_length="743"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="745" r_length="745" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E343349" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>743</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E343349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19563" e_stop="18821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTTGACACTGCCAATCTTCTGACTGCACCAACAATTCCAACAACCAACACATTCTTCCATGAAGCATGGAAGATTCAATTGGAACTGGCTCGTGCTGCAGCAAGTGAAGATCCATCCATAAGCGGTCTTACCAAAACAATGCAAGAGGAGTTTGATAAATACTGGAAGAGTTGTTGTCTAATATTAGCTATTGCCGTTGTAATGGATCCACGCTTCAAAATGAAACTTGTAGAATTCAGCTTTACAAAAATATATGGTGAAGAAGCTGCCACCTTTGTGAAGTTCGTTGAGGAGGGAATCCACGAGCTCTTCCTTGAATACGTGGCACTTCCTCTGCCTCTGACCCCAGCTTATGCTGAAGAGGTAGATGATGGAGCTTTGAAGCAGGAGAATGGTGGGGGCGGACTTACAGATTTTGATGCCTATATTATGGAGACAACAAGCCAGCAGTCAAGGTCAGAACTTGATCAATATTTGGATGAGTCCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAAT-GGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTG-ATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATC-GCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATTTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACCTTACATGCACC</genome_strand>
        <mrna_strand>CTCTTTGACACTGCCAATCTTCTGACTGCACCAACAATTCCAACAACCAACACATTCTTCCATGAAGCATGGAAGATTCAATTGGAACTGGCTCGTGCTGCAGCAAGTGAAGATCCATCCATAAGCGGTCTTACCAAAACAATGCAAGAGGAGTTTGATAAATACTGGAAGAGTTGTTGTCTAATATTAGCTATTGCCGTTGTAATGGATCCACGCTTCAAAATGAAACTTGTAGAATTCAGCTTTACAAAAATATATGGTGAAGAAGCTGCCACCTTTGTGAAGTTCGTTGAGGAGGGAATCCACGAGCTCTTCCTTGAATACGTGGCACTTCCTCTGCCTCTGACCCCAGCTTATGCTGAAGAGGTAGATGATGGAGCTTTGAAGCAGGAGAATGGTGGGGGCGGACTTACAGATTTTGATGCCTATATTATGGAGACAACAAGCCAGCAGTCAAGGTCAGAACTTGATCAATATTTGGATGAGTCCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTGNATTCTGTGTTTAGCACGGTAGGCAAAGAAATGGATCNGCTACANGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATTTGCGCCCAGGATTGGCTTC-AAATGCATCAGTAAATACCTTACATGCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E297077" ref_strand="+" ref_description="SGN-E297077 [cLEW-2-A22]">
      <seq>cgagctctttcttgaatacgtggcacttcctctgcctttgaccccagcttatgctgaagaggtagatgatggagctttgaagcaggagaatggtgggggcggacttacagattttgatgcctatattatggagacaacaagccaacagtcaaggtcagaacttgatcaatatttggatgagtccttgttgcctcgtgttcatgagtttgacgttgttgggtggtggaaactgaacagaatgaaggacccaactctgtcaaaaatggctcgtgacatattgtctgtaccagtttctactgtaacacctgattctgtgtttagcacggtgggcaaagagatggatcgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19558" stop="18613"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19258" g_stop="18913" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="346" r_length="346" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E297077" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>346</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E297077" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19258" e_stop="18913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGCTCTTCCTTGAATACGTGGCACTTCCTCTGCCTCTGACCCCAGCTTATGCTGAAGAGGTAGATGATGGAGCTTTGAAGCAGGAGAATGGTGGGGGCGGACTTACAGATTTTGATGCCTATATTATGGAGACAACAAGCCAGCAGTCAAGGTCAGAACTTGATCAATATTTGGATGAGTCCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGC</genome_strand>
        <mrna_strand>CGAGCTCTTTCTTGAATACGTGGCACTTCCTCTGCCTTTGACCCCAGCTTATGCTGAAGAGGTAGATGATGGAGCTTTGAAGCAGGAGAATGGTGGGGGCGGACTTACAGATTTTGATGCCTATATTATGGAGACAACAAGCCAACAGTCAAGGTCAGAACTTGATCAATATTTGGATGAGTCCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGGACCCAACTCTGTCAAAAATGGCTCGTGACATATTGTCTGTACCAGTTTCTACTGTAACACCTGATTCTGTGTTTAGCACGGTGGGCAAAGAGATGGATCGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E293815" ref_strand="+" ref_description="SGN-E293815 [cLET-37-K8]">
      <seq>tcaattggaactggctcgtgctgcagcaagtgaagatccatccataagcggtcttaccaaaacaatgcaagaggagtttgataaatactggaagagttgttgtctaatattagctattgccgttgtaatggatccacgcttcaaaatgaaacttgtagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19786" stop="19027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19486" g_stop="19327" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E293815" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>160</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19486" e_stop="19327"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTGGAACTGGCTCGTGCTGCAGCAAGTGAAGATCCATCCATAAGCGGTCTTACCAAAACAATGCAAGAGGAGTTTGATAAATACTGGAAGAGTTGTTGTCTAATATTAGCTATTGCCGTTGTAATGGATCCACGCTTCAAAATGAAACTTGTAGAA</genome_strand>
        <mrna_strand>TCAATTGGAACTGGCTCGTGCTGCAGCAAGTGAAGATCCATCCATAAGCGGTCTTACCAAAACAATGCAAGAGGAGTTTGATAAATACTGGAAGAGTTGTTGTCTAATATTAGCTATTGCCGTTGTAATGGATCCACGCTTCAAAATGAAACTTGTAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E266707" ref_strand="+" ref_description="SGN-E266707 [cLEI-5-H8]">
      <seq>cagattctgacacggctttcagccatgctgttgctgcttgcctttctgactggagtatggaaggtaagttgttttctgtcactattaatcaaccgttgggtgatgcttctgttgataatcttagagctttactatctgtgaagaaccctcttgtgctcaacggtcagttgttggtcggaagttgtcttgctcgaactttaagcagcattgcccaaggtgcatttaattttttgcatgaaactgttaagaaagtaagagatagcgtcaagtacgtgaaaacatcagaatttcacgaggaaaagtttattgagctcaaacagcagcttcaagtgccaagcacaaagactttggctcttgatgaccagactcaatggaacaccacatatgagatgttgttagctgcatcagagttaaaggaagtgttttcatgcttggatacatctgatcccgattacaaggatgccctgtcaatggatgattggaagcaagttgaggttctttgtacttacttgaagatcctctttgacactgccaatcttctgactgcaccaacaattccaacaaccaacacattcttccatgaagcatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="20381" stop="19191"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20081" g_stop="19491" g_length="591"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E266707" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>591</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266707" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20081" e_stop="19491"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATTCTGACACGGCTTTCAGCCATGCTGTTGCTGCTTGCCTTTCTGACTGGAGTATGGAAGGTAAGTTGTTTTCTGTCACTATTAATCAACCGTTGGGTGATGCTTCTGTTGATAATCTTAGAGCTTTACTATCTGTGAAGAACCCTCTTGTGCTCAACGGTCAGTTGTTGGTCGGAAGTTGTCTTGCTCGAACTTTAAGCAGCATTGCCCAAGGTGCATTTAATTTTTTGCATGAAACTGTTAAGAAAGTAAGAGATAGCGTCAAGTACGTGAAAACATCAGAATTTCACGAGGAAAAGTTTATTGAGCTCAAACAGCAGCTTCAAGTGCCAAGCACAAAGACTTTGGCTCTTGATGACCAGACTCAATGGAACACCACATATGAGATGTTGTTAGCTGCATCAGAGTTAAAGGAAGTGTTTTCATGCTTGGATACATCTGATCCCGATTACAAGGATGCCCTGTCAATGGATGATTGGAAGCAAGTTGAGGTTCTTTGTACTTACTTGAAGATCCTCTTTGACACTGCCAATCTTCTGACTGCACCAACAATTCCAACAACCAACACATTCTTCCATGAAGCATGGA</genome_strand>
        <mrna_strand>CAGATTCTGACACGGCTTTCAGCCATGCTGTTGCTGCTTGCCTTTCTGACTGGAGTATGGAAGGTAAGTTGTTTTCTGTCACTATTAATCAACCGTTGGGTGATGCTTCTGTTGATAATCTTAGAGCTTTACTATCTGTGAAGAACCCTCTTGTGCTCAACGGTCAGTTGTTGGTCGGAAGTTGTCTTGCTCGAACTTTAAGCAGCATTGCCCAAGGTGCATTTAATTTTTTGCATGAAACTGTTAAGAAAGTAAGAGATAGCGTCAAGTACGTGAAAACATCAGAATTTCACGAGGAAAAGTTTATTGAGCTCAAACAGCAGCTTCAAGTGCCAAGCACAAAGACTTTGGCTCTTGATGACCAGACTCAATGGAACACCACATATGAGATGTTGTTAGCTGCATCAGAGTTAAAGGAAGTGTTTTCATGCTTGGATACATCTGATCCCGATTACAAGGATGCCCTGTCAATGGATGATTGGAAGCAAGTTGAGGTTCTTTGTACTTACTTGAAGATCCTCTTTGACACTGCCAATCTTCTGACTGCACCAACAATTCCAACAACCAACACATTCTTCCATGAAGCATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E248601" ref_strand="+" ref_description="SGN-E248601 [cLEF-58-I1]">
      <seq>agtatattgacagtgagtggaaaattcacaggaaaatactcaatatcattatggaaccatatccagattctgacacggctttcagccatgctgttgctgcttgcctttctgactggagtatggaaggtaagttgttttctgtcactattaatcaaccgttgggtgatgcttctgttgataatcttagagctttactatctgtgaagaaccctcttgtgctcaacggtcagttgttggtcggaagttgtcttgctcgaactttaagcagcattgcccaaggtgcatttaattttttgcatgaaactgttaagaaagtaagagatagcgtcaagtacgtgaaaacatcagaatttcacgaggaaaagtttattgagctcaaacagcagcttcaagtgccaagcacaaagactttggctcttgatgaccagactcaatggaacaccacatatgagatgttgttagctgcatcagagttaaaggaagtgttttcatgcttggatacatctgatcccgattacaaggatgccctgtcaatggatgattggaagcaagttgaggttctttgtacttacttgaagatcctctttgacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="20444" stop="19253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20144" g_stop="19553" g_length="592"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="592" r_length="592" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E248601" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20144" e_stop="19553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATATTGACAGTGAGTGGAAAATTCACAGGAAAATACTCAATATCATTATGGAACCATATCCAGATTCTGACACGGCTTTCAGCCATGCTGTTGCTGCTTGCCTTTCTGACTGGAGTATGGAAGGTAAGTTGTTTTCTGTCACTATTAATCAACCGTTGGGTGATGCTTCTGTTGATAATCTTAGAGCTTTACTATCTGTGAAGAACCCTCTTGTGCTCAACGGTCAGTTGTTGGTCGGAAGTTGTCTTGCTCGAACTTTAAGCAGCATTGCCCAAGGTGCATTTAATTTTTTGCATGAAACTGTTAAGAAAGTAAGAGATAGCGTCAAGTACGTGAAAACATCAGAATTTCACGAGGAAAAGTTTATTGAGCTCAAACAGCAGCTTCAAGTGCCAAGCACAAAGACTTTGGCTCTTGATGACCAGACTCAATGGAACACCACATATGAGATGTTGTTAGCTGCATCAGAGTTAAAGGAAGTGTTTTCATGCTTGGATACATCTGATCCCGATTACAAGGATGCCCTGTCAATGGATGATTGGAAGCAAGTTGAGGTTCTTTGTACTTACTTGAAGATCCTCTTTGACAC</genome_strand>
        <mrna_strand>AGTATATTGACAGTGAGTGGAAAATTCACAGGAAAATACTCAATATCATTATGGAACCATATCCAGATTCTGACACGGCTTTCAGCCATGCTGTTGCTGCTTGCCTTTCTGACTGGAGTATGGAAGGTAAGTTGTTTTCTGTCACTATTAATCAACCGTTGGGTGATGCTTCTGTTGATAATCTTAGAGCTTTACTATCTGTGAAGAACCCTCTTGTGCTCAACGGTCAGTTGTTGGTCGGAAGTTGTCTTGCTCGAACTTTAAGCAGCATTGCCCAAGGTGCATTTAATTTTTTGCATGAAACTGTTAAGAAAGTAAGAGATAGCGTCAAGTACGTGAAAACATCAGAATTTCACGAGGAAAAGTTTATTGAGCTCAAACAGCAGCTTCAAGTGCCAAGCACAAAGACTTTGGCTCTTGATGACCAGACTCAATGGAACACCACATATGAGATGTTGTTAGCTGCATCAGAGTTAAAGGAAGTGTTTTCATGCTTGGATACATCTGATCCCGATTACAAGGATGCCCTGTCAATGGATGATTGGAAGCAAGTTGAGGTTCTTTGTACTTACTTGAAGATCCTCTTTGACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E727379" ref_strand="+" ref_description="SGN-E727379 [LA14CB05]">
      <seq>atgagatgatgcatgaacatagtcatgagatgatgccggaacatgagatgatgcatgaacatcatatggtgcttgggcatgagatagtccctagcaatgagatggtcccggatgatgagatgatcccactaaatgagatggtccttgctgaaccacaacccaactatatagaaacacctccaaacaatccagaaacacagcccagcaagcgtaggaagaagaagtcaatagtttgggaacacttcaccattgaaaatgtcggcggtggaactagaagggcacaatgtaagcagtgcaagcaatcatttgcatatagtacaggttcaaaagtagctggcactagtcacctgaaacgccatattgcaaaaggaacctgtccagttgtcctacgtaaccaacagaataatcaattgagcccatatagtacacctcctaagatgagtggatatggtggtagtactgatgcaccaaaacggcgttataggactgcatcttctccttaccttgcttttgatcctgaccggtgccgtcaagagatctctaagatgatcatcatgcacgactatccccttcacatggttgagcatccaggctttcttgcttttgtgcagaatcttcaacctcgttttgatatggtgagcttcaacactgtgcaaggagattgtgtggcaacttatcttagagagaagcaagccattcagaaggtcattgagggagtgcctgggcgtatctgcttaacgctagatatgtggtcctcctgctacactgtgggctatgtgttcataaccgggcagtatattgacagtgagtggaaaattcacaggaaaatactcaatatcattatggaaccatatccagattctgacacggctttcagccatgctgttgctgcttgcctttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="21236" stop="19736"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20936" g_stop="20036" g_length="901"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="901" r_length="901" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E727379" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>901</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E727379" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20936" e_stop="20036"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAGATGATGCATGAACATAGTCATGAGATGATGCCGGAACATGAGATGATGCATGAACATCATATGGTGCTTGGGCATGAGATAGTCCCTAGCAATGAGATGGTCCCGGATGATGAGATGATCCCACTAAATGAGATGGTCCTTGCTGAACCACAACCCAACTATATAGAAACACCTCCAAACAATCCAGAAACACAGCCCAGCAAGCGTAGGAAGAAGAAGTCAATAGTTTGGGAACACTTCACCATTGAAAATGTCGGCGGTGGAACTAGAAGGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATATAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCAAAAGGAACCTGTCCAGTTGTCCTACGTAACCAACAGAATAATCAATTGAGCCCATATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTTCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTGCAGAATCTTCAACCTCGTTTTGATATGGTGAGCTTCAACACTGTGCAAGGAGATTGTGTGGCAACTTATCTTAGAGAGAAGCAAGCCATTCAGAAGGTCATTGAGGGAGTGCCTGGGCGTATCTGCTTAACGCTAGATATGTGGTCCTCCTGCTACACTGTGGGCTATGTGTTCATAACCGGGCAGTATATTGACAGTGAGTGGAAAATTCACAGGAAAATACTCAATATCATTATGGAACCATATCCAGATTCTGACACGGCTTTCAGCCATGCTGTTGCTGCTTGCCTTTC</genome_strand>
        <mrna_strand>ATGAGATGATGCATGAACATAGTCATGAGATGATGCCGGAACATGAGATGATGCATGAACATCATATGGTGCTTGGGCATGAGATAGTCCCTAGCAATGAGATGGTCCCGGATGATGAGATGATCCCACTAAATGAGATGGTCCTTGCTGAACCACAACCCAACTATATAGAAACACCTCCAAACAATCCAGAAACACAGCCCAGCAAGCGTAGGAAGAAGAAGTCAATAGTTTGGGAACACTTCACCATTGAAAATGTCGGCGGTGGAACTAGAAGGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATATAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCAAAAGGAACCTGTCCAGTTGTCCTACGTAACCAACAGAATAATCAATTGAGCCCATATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTTCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTGCAGAATCTTCAACCTCGTTTTGATATGGTGAGCTTCAACACTGTGCAAGGAGATTGTGTGGCAACTTATCTTAGAGAGAAGCAAGCCATTCAGAAGGTCATTGAGGGAGTGCCTGGGCGTATCTGCTTAACGCTAGATATGTGGTCCTCCTGCTACACTGTGGGCTATGTGTTCATAACCGGGCAGTATATTGACAGTGAGTGGAAAATTCACAGGAAAATACTCAATATCATTATGGAACCATATCCAGATTCTGACACGGCTTTCAGCCATGCTGTTGCTGCTTGCCTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E442296" ref_strand="+" ref_description="SGN-E442296 [cSTA-32-L17]">
      <seq>gggcacaatgtaagcagtgcaagcaatcatttgcatacagtacaggttcaaaagtagctggcactagtcacctgaaacgccatattgccaaaggaacctgtccagtagtcctacgtaaccaacagaacaatcaattgagcccgtatagtacacctcctaagatgagtggatatggtggtagtactgatgcaccaaaacggcgttataggactgcatctgctccttaccttgcttttgatcctgaccggtgccgtcaagagatctctaagatgatcatcatgcacgactatccccttcacatggttgagcatccaggctttcttgcttttgttcagaatctgcaacctcgttttgatatggtgagcttcaacactgtgcaaggagattgtgtggcaacttatcttagagagaagcaagcaattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="20960" stop="19937"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="20660" g_stop="20237" g_length="424"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="424" r_length="424" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E442296" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E442296" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="20660" e_stop="20237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATATAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCAAAAGGAACCTGTCCAGTTGTCCTACGTAACCAACAGAATAATCAATTGAGCCCATATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTTCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTGCAGAATCTTCAACCTCGTTTTGATATGGTGAGCTTCAACACTGTGCAAGGAGATTGTGTGGCAACTTATCTTAGAGAGAAGCAAGCCATTCA</genome_strand>
        <mrna_strand>GGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATACAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCCAAAGGAACCTGTCCAGTAGTCCTACGTAACCAACAGAACAATCAATTGAGCCCGTATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTGCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTTCAGAATCTGCAACCTCGTTTTGATATGGTGAGCTTCAACACTGTGCAAGGAGATTGTGTGGCAACTTATCTTAGAGAGAAGCAAGCAATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E738046" ref_strand="+" ref_description="SGN-E738046 [LC12AF10]">
      <seq>ccctattctcttttcctctctctctcttctttctctctcctccagctacggccgaaaacctagatctgattcactaccggagcctgaaaaactcgtcggcttcgaaattcctatctgggttttgctcagaattgaatttcggtaattgggttcttctcaaaattcaaaatttccaacagccttgagcttctggatattgatggcaaccccagaaaccgcagctcctccagcaacccctactgagaataatgagatggtgccgaaaaatgagatgatacatgagcatggtgatgagatggtgccgcaacatgagatgatgcatgaacatcatatggtgcttgggcatgagatagtccctagcaatgagatggtcccggatgatgagatgatcccactaaatgagatggtccttgctgaaccacaacccaactatatagaaacacctccaaacaatccagaaacacagcccagcaagcgtaggaagaagaagtcaatagtttgggaacacttcaccattgaaaatgtcggcggtggaactagaagggcacaatgtaagcagtgcaagcaatcatttgcatatagtacaggttcaaaagtagctggcactagtcacctgaaacgccatattgcaaaaggaacctgtccagttgtcctacgtaaccaacagaataatcaattgagcccatatagtacacctcctaagatgagtggatatggtggtagtactgatgcaccaaaacggcgttataggactgcatcttctccttaccttgcttttgatcctgaccggtgccgtcaagagatctctaagatgatcatcatgcacgactatccccttcacatggttgagcatccaggctttcttgcttttgtgcagaatcttcaacctcgttttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23993" stop="20007"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23693" g_stop="23515" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21623" g_stop="21490" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="313" r_length="134" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21489" i_stop="20890" i_length="600">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="20889" g_stop="20307" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="896" r_length="583" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E738046" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>896</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23693" e_stop="23515"/>
          <exon e_start="21623" e_stop="21490"/>
          <exon e_start="20889" e_stop="20307"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATTCTCTTTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAGGTATGGTAGTAGTACTACCCCCTTTTGTTCAATTCAGATTTGATTTAGTTTTTCATTTTTTTAAATCGATTTTTAGCTATGGATTTACTGTGTTAGTGTGAAGATTTGTGTAAAATGTGTGCTGAATAAGATTTTAAAGGTTTATGTTCTTAGATTTTGATATTTCAGTATCTGTTGTGAGGTATTTGAAGCTTCTTAGGCTCATTTCAAAGTTTAGCTGATGTGTTTTGTTAAAAAAGTTGGGATTTTTTTATCTTTTTATTGATGTTCTGGGCTGGAAGTTTGCAGGTTTAATGAAATTCAAGGCTGTATGTGAAATATTGATGAAGTTTTTGGTTGAATTTTTTGTCTGGGTAGTGTAATAGATCCATTGTTAGTAAAAAAGAGGATTTTGATCTGGGCTTTGTTTAGATTTATCTATAAGCCCATGTTTGATCCATTTTCGGAGTTAGATTTTTGTAAGTTGATGTTTCTATCTTGTTAGCCCATGTGTTGTAAAATGTCCATTTTAGCCCTGACTTCCATTGAAAATAGAGTTTTACTCTCCTTGTTGCCTTAGGAGGACTAGTAGTATTTAGCTTTGGGTTAGGTGTGGGTTCGGGCCGGGCCGGGCCGGTGGAGGTAACACCGGGCTTTCCGAGATGCTCCACGGGCTATATTGTTCTGCTACGAGGAACTAATTTGGTGTAGTTTGTTGGCTAAAGCTTTGAGTCTCATGTACTATTTGTCCGAAGAGTGAGTTTAGGGAGCTGTTTGTCCATTGATTTTGTTTTGAACATTTGAAATAATATATGGAGATTATTTCAAGTAAGTATTTGCTTATCATACTGACCCATTGTTTCAACTTCAAACTTGAAATATGGAATTTGAAGTTTAAATTGTCATTCGTGCACCTGTCCTCAATGGAAGAATGAGTGATTTGTCAACCCTGGACAGGTGGCGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGGGAATTTCCGGTGGAGCAGTGAAATGCGTAGTGAGCGGAGAGTTTTTCAAGTTTAACTCACCAAAACTTCCAACTATGTTTTCATATCTAAATACAATTTCAACTTCAACTTCCAAGTACCATTTGGTTAACTTAACGTCTGATTTTTTCTCCAAATATCAACCAATTCATGCACAAATGCCTACTAAGTATGGTTGAAGCAATGGAGTTGCAGCCTAAGGTTTGCAACTTCATGCGACATTCATTAGGTGCAGGGTTCAATACCTACTGATAGCCATTGGCTGCAACTCAATACTGAATCTCTATGGTGCAAGGTTCAATTCCTACATATGGCTCTCCCTTAATCCAGAAACAGTATAAAACACCGTGTTTACTTTGCAGCTTCATGACAAATCCAAGGAACCACCTTTATTCTGCTTGATAGAAGCTAAGGTGCAACATTAACATTTGTTGTGGACCTAAGCTTACAAAGGATGCAAAGCCCTTACCAGAAATGGATGATGCATTCAGCTCCGCTGTAGCCATTTCTTTCTTTTCAAGGAAAGATCTTGGACTGATAGCCACGGAGGGTTTTCTCTAAAACTGACTGAGGAGTGAATGAGGTGTGATTTTAGACTTATCAAAGATATAATACGTCGAGCTGTGAAGTATATCAAAACAGACACTAGTTTACAGAGGGAGGAGGAAGAAAGAGAATTCGTATTGATTTTTTTAACACAAAAGAATCTTAGTTTCCTGAGAGTCATTACAGAAAATGCACACACACGCACGCATCCATGATGGTGTTCTTTTCGGGCATGTGTTTTGTGTGGTCGCTCTTCTTTTCTTCTGTTCACAATATATACGATTTTTGTTTTCTTTCTCCTTATTTATTGTTATATTATACAGATAATTGATAAGTGTTGTGCTTCTAACAGCCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAAAATGAGATGACACATGAGCATAATCACGAGATGGTGCCGGAAAATGAGATGATGCATGAACATGGTCATGAGATGGTGCCGGAACATGAGATGATGCATGAACATAGTCATGAGATGATGCCGGAACATGAGATGATGCATGAACATCATATGGTGCTTGGGCATGAGATAGTCCCTAGCAATGAGATGGTCCCGGATGATGAGATGATCCCACTAAATGAGATGGTCCTTGCTGAACCACAACCCAACTATATAGAAACACCTCCAAACAATCCAGAAACACAGCCCAGCAAGCGTAGGAAGAAGAAGTCAATAGTTTGGGAACACTTCACCATTGAAAATGTCGGCGGTGGAACTAGAAGGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATATAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCAAAAGGAACCTGTCCAGTTGTCCTACGTAACCAACAGAATAATCAATTGAGCCCATATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTTCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTGCAGAATCTTCAACCTCGTTTTG</genome_strand>
        <mrna_strand>CCCTATTCTCTTTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAACATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGATGCATGAACATCATATGGTGCTTGGGCATGAGATAGTCCCTAGCAATGAGATGGTCCCGGATGATGAGATGATCCCACTAAATGAGATGGTCCTTGCTGAACCACAACCCAACTATATAGAAACACCTCCAAACAATCCAGAAACACAGCCCAGCAAGCGTAGGAAGAAGAAGTCAATAGTTTGGGAACACTTCACCATTGAAAATGTCGGCGGTGGAACTAGAAGGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATATAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCAAAAGGAACCTGTCCAGTTGTCCTACGTAACCAACAGAATAATCAATTGAGCCCATATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTTCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTGCAGAATCTTCAACCTCGTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E738139" ref_strand="+" ref_description="SGN-E738139 [LC12CB06]">
      <seq>ccctattctcttttcctctctctctcttctttctctctcctccagctacggccgaaaacctagatctgattcactaccggagcctgaaaaactcgtcggcttcgaaattcctatctgggttttgctcagaattgaatttcggtaattgggttcttctcaaaattcaaaatttccaacagccttgagcttctggatattgatggcaaccccagaaaccgcagctcctccagcaacccctactgagaataatgagatggtgccgaaaaatgagatgatacatgagcatggtgatgagatggtgccgcaaaatgagatgatacatgagcatggtgatgagatggtgccgcaaaatgagatgatacatgagcaaagccatgagattgtgccggaaaatgagatgcaaaatgagatgatacatgagattgtgccggaaaatgagatgcaaaatgagatgatacatgagcacagccatgacattgtgcctgaaaatgagatgcaaaatgagcacagccatgagattatgccggaaaatgagatgatacgtgagcacagccatgagattgtgcgggaaaatgagatgatacctgagcacaatcatgagatagtgccggaaaatgagatgatacatgagtgcagtcacgagacagtgccacaaaatgagatggtacatgagcatagtcatgaaatggtgccagataatgagatgacacatgagcacactcacgagatggtgccggaaaatgagatgacacatgatcataatcacgagatggtgcangaaaatgagatgacacatgagcataatcacgagatggtgccggaaaatgagatgatgcatgaacatggtcatgagatggtgccggaacatgagatgatgcatgaacatagtcatgagatgatgccggaacatgagatgatgcatgaacatcatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23993" stop="20570"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23693" g_stop="23515" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21623" g_stop="20870" g_length="754"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="933" r_length="754" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E738139" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>933</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E738139" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23693" e_stop="23515"/>
          <exon e_start="21623" e_stop="20870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATTCTCTTTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAGGTATGGTAGTAGTACTACCCCCTTTTGTTCAATTCAGATTTGATTTAGTTTTTCATTTTTTTAAATCGATTTTTAGCTATGGATTTACTGTGTTAGTGTGAAGATTTGTGTAAAATGTGTGCTGAATAAGATTTTAAAGGTTTATGTTCTTAGATTTTGATATTTCAGTATCTGTTGTGAGGTATTTGAAGCTTCTTAGGCTCATTTCAAAGTTTAGCTGATGTGTTTTGTTAAAAAAGTTGGGATTTTTTTATCTTTTTATTGATGTTCTGGGCTGGAAGTTTGCAGGTTTAATGAAATTCAAGGCTGTATGTGAAATATTGATGAAGTTTTTGGTTGAATTTTTTGTCTGGGTAGTGTAATAGATCCATTGTTAGTAAAAAAGAGGATTTTGATCTGGGCTTTGTTTAGATTTATCTATAAGCCCATGTTTGATCCATTTTCGGAGTTAGATTTTTGTAAGTTGATGTTTCTATCTTGTTAGCCCATGTGTTGTAAAATGTCCATTTTAGCCCTGACTTCCATTGAAAATAGAGTTTTACTCTCCTTGTTGCCTTAGGAGGACTAGTAGTATTTAGCTTTGGGTTAGGTGTGGGTTCGGGCCGGGCCGGGCCGGTGGAGGTAACACCGGGCTTTCCGAGATGCTCCACGGGCTATATTGTTCTGCTACGAGGAACTAATTTGGTGTAGTTTGTTGGCTAAAGCTTTGAGTCTCATGTACTATTTGTCCGAAGAGTGAGTTTAGGGAGCTGTTTGTCCATTGATTTTGTTTTGAACATTTGAAATAATATATGGAGATTATTTCAAGTAAGTATTTGCTTATCATACTGACCCATTGTTTCAACTTCAAACTTGAAATATGGAATTTGAAGTTTAAATTGTCATTCGTGCACCTGTCCTCAATGGAAGAATGAGTGATTTGTCAACCCTGGACAGGTGGCGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGGGAATTTCCGGTGGAGCAGTGAAATGCGTAGTGAGCGGAGAGTTTTTCAAGTTTAACTCACCAAAACTTCCAACTATGTTTTCATATCTAAATACAATTTCAACTTCAACTTCCAAGTACCATTTGGTTAACTTAACGTCTGATTTTTTCTCCAAATATCAACCAATTCATGCACAAATGCCTACTAAGTATGGTTGAAGCAATGGAGTTGCAGCCTAAGGTTTGCAACTTCATGCGACATTCATTAGGTGCAGGGTTCAATACCTACTGATAGCCATTGGCTGCAACTCAATACTGAATCTCTATGGTGCAAGGTTCAATTCCTACATATGGCTCTCCCTTAATCCAGAAACAGTATAAAACACCGTGTTTACTTTGCAGCTTCATGACAAATCCAAGGAACCACCTTTATTCTGCTTGATAGAAGCTAAGGTGCAACATTAACATTTGTTGTGGACCTAAGCTTACAAAGGATGCAAAGCCCTTACCAGAAATGGATGATGCATTCAGCTCCGCTGTAGCCATTTCTTTCTTTTCAAGGAAAGATCTTGGACTGATAGCCACGGAGGGTTTTCTCTAAAACTGACTGAGGAGTGAATGAGGTGTGATTTTAGACTTATCAAAGATATAATACGTCGAGCTGTGAAGTATATCAAAACAGACACTAGTTTACAGAGGGAGGAGGAAGAAAGAGAATTCGTATTGATTTTTTTAACACAAAAGAATCTTAGTTTCCTGAGAGTCATTACAGAAAATGCACACACACGCACGCATCCATGATGGTGTTCTTTTCGGGCATGTGTTTTGTGTGGTCGCTCTTCTTTTCTTCTGTTCACAATATATACGATTTTTGTTTTCTTTCTCCTTATTTATTGTTATATTATACAGATAATTGATAAGTGTTGTGCTTCTAACAGCCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAAAATGAGATGACACATGAGCATAATCACGAGATGGTGCCGGAAAATGAGATGATGCATGAACATGGTCATGAGATGGTGCCGGAACATGAGATGATGCATGAACATAGTCATGAGATGATGCCGGAACATGAGATGATGCATGAACATCATAT</genome_strand>
        <mrna_strand>CCCTATTCTCTTTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCANGAAAATGAGATGACACATGAGCATAATCACGAGATGGTGCCGGAAAATGAGATGATGCATGAACATGGTCATGAGATGGTGCCGGAACATGAGATGATGCATGAACATAGTCATGAGATGATGCCGGAACATGAGATGATGCATGAACATCATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E578684" ref_strand="+" ref_description="SGN-E578684 [85804]">
      <seq>aaagcccaattctctttctctctcatccagctacggccgaaaacctagatctgattcactaccggagcctgaaaaactcgtcggcttcgaaattcctatctgggttttgctcagaattgaatttcggtaattgggttattctgaaaattcaaatttcctacagccttgagcttctggatattgatggcgaccccagaaaccacagctactccagcaacccccactgagaataatgagatagtgccgaaaaatgagatgattcatgagcatggtgatgaaatggtgccgcaaaatgagatgatacatgagcacagccatgagattgtgccggaaaatgagatgatacatgagcacagccatgagattgtgccggaaaatgagatgatacacgagcacagccatgagattgtgccggaaaaggagatgatacatgagcatagtcatgagattgtgccggaaaatgagatgatacatgagcacagtcacgagacagtgccgcaaaatgagatgatacatgagcatagtcatgagatggtgccagaaaatgagatgacacatgagcacagtcatgcgatggtgcgggaaaatgagatgacacatgagcacagtcacgagatggtgcgggaaaatgagatgaccatgagcattatcacgagatggtgcgggaaaatgagatgacacatgagcattatcacgagatggtggccagaacctgagatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23976" stop="20626"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23666" g_stop="23515" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="163" r_length="151" r_score="0.967"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21623" g_stop="21490" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="297" r_length="134" r_score="0.948"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21489" i_stop="21352" i_length="138">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21351" g_stop="20926" g_length="426"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="723" r_length="426" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E578684" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E578684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23666" e_stop="23515"/>
          <exon e_start="21623" e_stop="21490"/>
          <exon e_start="21351" e_stop="20926"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAGGTATGGTAGTAGTACTACCCCCTTTTGTTCAATTCAGATTTGATTTAGTTTTTCATTTTTTTAAATCGATTTTTAGCTATGGATTTACTGTGTTAGTGTGAAGATTTGTGTAAAATGTGTGCTGAATAAGATTTTAAAGGTTTATGTTCTTAGATTTTGATATTTCAGTATCTGTTGTGAGGTATTTGAAGCTTCTTAGGCTCATTTCAAAGTTTAGCTGATGTGTTTTGTTAAAAAAGTTGGGATTTTTTTATCTTTTTATTGATGTTCTGGGCTGGAAGTTTGCAGGTTTAATGAAATTCAAGGCTGTATGTGAAATATTGATGAAGTTTTTGGTTGAATTTTTTGTCTGGGTAGTGTAATAGATCCATTGTTAGTAAAAAAGAGGATTTTGATCTGGGCTTTGTTTAGATTTATCTATAAGCCCATGTTTGATCCATTTTCGGAGTTAGATTTTTGTAAGTTGATGTTTCTATCTTGTTAGCCCATGTGTTGTAAAATGTCCATTTTAGCCCTGACTTCCATTGAAAATAGAGTTTTACTCTCCTTGTTGCCTTAGGAGGACTAGTAGTATTTAGCTTTGGGTTAGGTGTGGGTTCGGGCCGGGCCGGGCCGGTGGAGGTAACACCGGGCTTTCCGAGATGCTCCACGGGCTATATTGTTCTGCTACGAGGAACTAATTTGGTGTAGTTTGTTGGCTAAAGCTTTGAGTCTCATGTACTATTTGTCCGAAGAGTGAGTTTAGGGAGCTGTTTGTCCATTGATTTTGTTTTGAACATTTGAAATAATATATGGAGATTATTTCAAGTAAGTATTTGCTTATCATACTGACCCATTGTTTCAACTTCAAACTTGAAATATGGAATTTGAAGTTTAAATTGTCATTCGTGCACCTGTCCTCAATGGAAGAATGAGTGATTTGTCAACCCTGGACAGGTGGCGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGGGAATTTCCGGTGGAGCAGTGAAATGCGTAGTGAGCGGAGAGTTTTTCAAGTTTAACTCACCAAAACTTCCAACTATGTTTTCATATCTAAATACAATTTCAACTTCAACTTCCAAGTACCATTTGGTTAACTTAACGTCTGATTTTTTCTCCAAATATCAACCAATTCATGCACAAATGCCTACTAAGTATGGTTGAAGCAATGGAGTTGCAGCCTAAGGTTTGCAACTTCATGCGACATTCATTAGGTGCAGGGTTCAATACCTACTGATAGCCATTGGCTGCAACTCAATACTGAATCTCTATGGTGCAAGGTTCAATTCCTACATATGGCTCTCCCTTAATCCAGAAACAGTATAAAACACCGTGTTTACTTTGCAGCTTCATGACAAATCCAAGGAACCACCTTTATTCTGCTTGATAGAAGCTAAGGTGCAACATTAACATTTGTTGTGGACCTAAGCTTACAAAGGATGCAAAGCCCTTACCAGAAATGGATGATGCATTCAGCTCCGCTGTAGCCATTTCTTTCTTTTCAAGGAAAGATCTTGGACTGATAGCCACGGAGGGTTTTCTCTAAAACTGACTGAGGAGTGAATGAGGTGTGATTTTAGACTTATCAAAGATATAATACGTCGAGCTGTGAAGTATATCAAAACAGACACTAGTTTACAGAGGGAGGAGGAAGAAAGAGAATTCGTATTGATTTTTTTAACACAAAAGAATCTTAGTTTCCTGAGAGTCATTACAGAAAATGCACACACACGCACGCATCCATGATGGTGTTCTTTTCGGGCATGTGTTTTGTGTGGTCGCTCTTCTTTTCTTCTGTTCACAATATATACGATTTTTGTTTTCTTTCTCCTTATTTATTGTTATATTATACAGATAATTGATAAGTGTTGTGCTTCTAACAGCCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAAAATGAGATGACACATGAGCATAATCACGAGATGGTGCCGGAAAATGAGATGATGCATGAACATGGTCATGAGATGGT-GCCGGAACATGAGATGATG</genome_strand>
        <mrna_strand>TCTTTCTCTCTCATCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTATTCTGAAAATTC-AAATTTCCTACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAGCTTCTGGATATTGATGGCGACCCCAGAAACCACAGCTACTCCAGCAACCCCCACTGAGAATAATGAGATAGTGCCGAAAAATGAGATGATTCATGAGCATGGTGATGAAATGGTGCCGCAAAATGAG..........................................................................................................................................ATGATACATGAGCACAGCCATGAGATTGTGCCGGAAAATGAGATGATACATGAGCACAGCCATGAGATTGTGCCGGAAAATGAGATGATACACGAGCACAGCCATGAGATTGTGCCGGAAAAGGAGATGATACATGAGCATAGTCATGAGATTGTGCCGGAAAATGAGATGATACATGAGCACAGTCACGAGACAGTGCCGCAAAATGAGATGATACATGAGCATAGTCATGAGATGGTGCCAGAAAATGAGATGACACATGAGCACAGTCATGCGATGGTGCGGGAAAATGAGATGACACATGAGCACAGTCACGAGATGGTGCGGGAAAATGAGATGAC-CATGAGCATTATCACGAGATGGTGCGGGAAAATGAGATGACACATGAGCATTATCACGAGATGGTGGCCAGAACCTGAGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E419099" ref_strand="+" ref_description="SGN-E419099 [STM-28-P10]">
      <seq>gttcaaagcccaattctctttctctctcatccagctacggccgaaaacctagatctgattcactaccggagcctgaaaaactcgtcggcttcgaaattcctatctgggttttgctcagaattgaatttcggtaattgggttattctgaaaattcaaaatttcctacagccttgagcttctggatattgatggcgaccccagaaaccacagctactccagcaacccccactgagaataatgagatagtgccgaaaaatgagatgattcatgagcatggtgatgaaatggtgccgcaaaatgagatgatacatgagcacagccatgagattgtgctggaaaatgagatgatacatgagcacagccatgagattgtgccggaaaatgagatgatacacgagcacagccatgagattgtgccggaaaaggagatgatacatgagcatagtcatgagattgtgccggaaaatgagatgatacatgagcacagtcacgagacagtgccgcaaaatgagatgatacatgagcatagtcatgagatggtgccagaaaatgagatgacacatgagcacagtcatgcgatggtgcgggaaaatgagatgacacatgagcacagtcacgagatggtgcgggaaaatgagatgacacatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23976" stop="20704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23682" g_stop="23515" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="0.917"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21623" g_stop="21490" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="302" r_length="134" r_score="0.948"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21489" i_stop="21352" i_length="138">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21351" g_stop="21004" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="650" r_length="348" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E419099" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>650</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419099" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23682" e_stop="23515"/>
          <exon e_start="21623" e_stop="21490"/>
          <exon e_start="21351" e_stop="21004"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAGGTATGGTAGTAGTACTACCCCCTTTTGTTCAATTCAGATTTGATTTAGTTTTTCATTTTTTTAAATCGATTTTTAGCTATGGATTTACTGTGTTAGTGTGAAGATTTGTGTAAAATGTGTGCTGAATAAGATTTTAAAGGTTTATGTTCTTAGATTTTGATATTTCAGTATCTGTTGTGAGGTATTTGAAGCTTCTTAGGCTCATTTCAAAGTTTAGCTGATGTGTTTTGTTAAAAAAGTTGGGATTTTTTTATCTTTTTATTGATGTTCTGGGCTGGAAGTTTGCAGGTTTAATGAAATTCAAGGCTGTATGTGAAATATTGATGAAGTTTTTGGTTGAATTTTTTGTCTGGGTAGTGTAATAGATCCATTGTTAGTAAAAAAGAGGATTTTGATCTGGGCTTTGTTTAGATTTATCTATAAGCCCATGTTTGATCCATTTTCGGAGTTAGATTTTTGTAAGTTGATGTTTCTATCTTGTTAGCCCATGTGTTGTAAAATGTCCATTTTAGCCCTGACTTCCATTGAAAATAGAGTTTTACTCTCCTTGTTGCCTTAGGAGGACTAGTAGTATTTAGCTTTGGGTTAGGTGTGGGTTCGGGCCGGGCCGGGCCGGTGGAGGTAACACCGGGCTTTCCGAGATGCTCCACGGGCTATATTGTTCTGCTACGAGGAACTAATTTGGTGTAGTTTGTTGGCTAAAGCTTTGAGTCTCATGTACTATTTGTCCGAAGAGTGAGTTTAGGGAGCTGTTTGTCCATTGATTTTGTTTTGAACATTTGAAATAATATATGGAGATTATTTCAAGTAAGTATTTGCTTATCATACTGACCCATTGTTTCAACTTCAAACTTGAAATATGGAATTTGAAGTTTAAATTGTCATTCGTGCACCTGTCCTCAATGGAAGAATGAGTGATTTGTCAACCCTGGACAGGTGGCGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGGGAATTTCCGGTGGAGCAGTGAAATGCGTAGTGAGCGGAGAGTTTTTCAAGTTTAACTCACCAAAACTTCCAACTATGTTTTCATATCTAAATACAATTTCAACTTCAACTTCCAAGTACCATTTGGTTAACTTAACGTCTGATTTTTTCTCCAAATATCAACCAATTCATGCACAAATGCCTACTAAGTATGGTTGAAGCAATGGAGTTGCAGCCTAAGGTTTGCAACTTCATGCGACATTCATTAGGTGCAGGGTTCAATACCTACTGATAGCCATTGGCTGCAACTCAATACTGAATCTCTATGGTGCAAGGTTCAATTCCTACATATGGCTCTCCCTTAATCCAGAAACAGTATAAAACACCGTGTTTACTTTGCAGCTTCATGACAAATCCAAGGAACCACCTTTATTCTGCTTGATAGAAGCTAAGGTGCAACATTAACATTTGTTGTGGACCTAAGCTTACAAAGGATGCAAAGCCCTTACCAGAAATGGATGATGCATTCAGCTCCGCTGTAGCCATTTCTTTCTTTTCAAGGAAAGATCTTGGACTGATAGCCACGGAGGGTTTTCTCTAAAACTGACTGAGGAGTGAATGAGGTGTGATTTTAGACTTATCAAAGATATAATACGTCGAGCTGTGAAGTATATCAAAACAGACACTAGTTTACAGAGGGAGGAGGAAGAAAGAGAATTCGTATTGATTTTTTTAACACAAAAGAATCTTAGTTTCCTGAGAGTCATTACAGAAAATGCACACACACGCACGCATCCATGATGGTGTTCTTTTCGGGCATGTGTTTTGTGTGGTCGCTCTTCTTTTCTTCTGTTCACAATATATACGATTTTTGTTTTCTTTCTCCTTATTTATTGTTATATTATACAGATAATTGATAAGTGTTGTGCTTCTAACAGCCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAAAATGAGATGACACATGAG</genome_strand>
        <mrna_strand>GTTCAAAGCCCAATTCTCTTTCTCTCTCATCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTATTCTGAAAATTCAAAATTTCCTACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAGCTTCTGGATATTGATGGCGACCCCAGAAACCACAGCTACTCCAGCAACCCCCACTGAGAATAATGAGATAGTGCCGAAAAATGAGATGATTCATGAGCATGGTGATGAAATGGTGCCGCAAAATGAG..........................................................................................................................................ATGATACATGAGCACAGCCATGAGATTGTGCTGGAAAATGAGATGATACATGAGCACAGCCATGAGATTGTGCCGGAAAATGAGATGATACACGAGCACAGCCATGAGATTGTGCCGGAAAAGGAGATGATACATGAGCATAGTCATGAGATTGTGCCGGAAAATGAGATGATACATGAGCACAGTCACGAGACAGTGCCGCAAAATGAGATGATACATGAGCATAGTCATGAGATGGTGCCAGAAAATGAGATGACACATGAGCACAGTCATGCGATGGTGCGGGAAAATGAGATGACACATGAGCACAGTCACGAGATGGTGCGGGAAAATGAGATGACACATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E736023" ref_strand="+" ref_description="SGN-E736023 [LC04AC02]">
      <seq>ccctattctcttttcctctctctctcttctttctctctcctccagctacggccgaaaacctagatctgattcactaccggagcctgaaaaactcgtcggcttcgaaattcctatctgggttttgctcagaattgaatttcggtaattgggttcttctcaaaattcaaaatttccaacagccttgagcttctggatattgatggcaaccccagaaaccgcagctcctccagcaacccctactgagaataatgagatggtgccgaaaaatgagatgatacatgagcatggtgatgagatggtgccgcaaaatgagatgatacatgagcatggtgatgagatggtgccgcaaaatgagatgatacatgagcaaagccatgagattgtgccggaaaatgagatgcaaaatgagatgatacatgagattgtgccggaaaatgagatgcaaaatgagatgatacatgagcacagccatgacattgtgcctgaaaatgagatgcaaaatgagcacagccatgagattatgccggaaaatgagatgatacgtgagcacagccatgagattgtgcgggaaaatgagatgatacctgagcacaatcatgagatagtgccggaaaatgagatgatacatgagtgcagtcacgagacagtgccacaaaatgagatggtacatgagcatagtcatgaaatggtgccagataatgagatgacacatgagcacactcacgagatggtgccggaaaatgagatgacacatgatcataatcacgagatggtgcaggaaaatgagatgacaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23993" stop="20708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23693" g_stop="23515" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21623" g_stop="21008" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="795" r_length="616" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E736023" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>795</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736023" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23693" e_stop="23515"/>
          <exon e_start="21623" e_stop="21008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCAATTCTCTTTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAGGTATGGTAGTAGTACTACCCCCTTTTGTTCAATTCAGATTTGATTTAGTTTTTCATTTTTTTAAATCGATTTTTAGCTATGGATTTACTGTGTTAGTGTGAAGATTTGTGTAAAATGTGTGCTGAATAAGATTTTAAAGGTTTATGTTCTTAGATTTTGATATTTCAGTATCTGTTGTGAGGTATTTGAAGCTTCTTAGGCTCATTTCAAAGTTTAGCTGATGTGTTTTGTTAAAAAAGTTGGGATTTTTTTATCTTTTTATTGATGTTCTGGGCTGGAAGTTTGCAGGTTTAATGAAATTCAAGGCTGTATGTGAAATATTGATGAAGTTTTTGGTTGAATTTTTTGTCTGGGTAGTGTAATAGATCCATTGTTAGTAAAAAAGAGGATTTTGATCTGGGCTTTGTTTAGATTTATCTATAAGCCCATGTTTGATCCATTTTCGGAGTTAGATTTTTGTAAGTTGATGTTTCTATCTTGTTAGCCCATGTGTTGTAAAATGTCCATTTTAGCCCTGACTTCCATTGAAAATAGAGTTTTACTCTCCTTGTTGCCTTAGGAGGACTAGTAGTATTTAGCTTTGGGTTAGGTGTGGGTTCGGGCCGGGCCGGGCCGGTGGAGGTAACACCGGGCTTTCCGAGATGCTCCACGGGCTATATTGTTCTGCTACGAGGAACTAATTTGGTGTAGTTTGTTGGCTAAAGCTTTGAGTCTCATGTACTATTTGTCCGAAGAGTGAGTTTAGGGAGCTGTTTGTCCATTGATTTTGTTTTGAACATTTGAAATAATATATGGAGATTATTTCAAGTAAGTATTTGCTTATCATACTGACCCATTGTTTCAACTTCAAACTTGAAATATGGAATTTGAAGTTTAAATTGTCATTCGTGCACCTGTCCTCAATGGAAGAATGAGTGATTTGTCAACCCTGGACAGGTGGCGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGGGAATTTCCGGTGGAGCAGTGAAATGCGTAGTGAGCGGAGAGTTTTTCAAGTTTAACTCACCAAAACTTCCAACTATGTTTTCATATCTAAATACAATTTCAACTTCAACTTCCAAGTACCATTTGGTTAACTTAACGTCTGATTTTTTCTCCAAATATCAACCAATTCATGCACAAATGCCTACTAAGTATGGTTGAAGCAATGGAGTTGCAGCCTAAGGTTTGCAACTTCATGCGACATTCATTAGGTGCAGGGTTCAATACCTACTGATAGCCATTGGCTGCAACTCAATACTGAATCTCTATGGTGCAAGGTTCAATTCCTACATATGGCTCTCCCTTAATCCAGAAACAGTATAAAACACCGTGTTTACTTTGCAGCTTCATGACAAATCCAAGGAACCACCTTTATTCTGCTTGATAGAAGCTAAGGTGCAACATTAACATTTGTTGTGGACCTAAGCTTACAAAGGATGCAAAGCCCTTACCAGAAATGGATGATGCATTCAGCTCCGCTGTAGCCATTTCTTTCTTTTCAAGGAAAGATCTTGGACTGATAGCCACGGAGGGTTTTCTCTAAAACTGACTGAGGAGTGAATGAGGTGTGATTTTAGACTTATCAAAGATATAATACGTCGAGCTGTGAAGTATATCAAAACAGACACTAGTTTACAGAGGGAGGAGGAAGAAAGAGAATTCGTATTGATTTTTTTAACACAAAAGAATCTTAGTTTCCTGAGAGTCATTACAGAAAATGCACACACACGCACGCATCCATGATGGTGTTCTTTTCGGGCATGTGTTTTGTGTGGTCGCTCTTCTTTTCTTCTGTTCACAATATATACGATTTTTGTTTTCTTTCTCCTTATTTATTGTTATATTATACAGATAATTGATAAGTGTTGTGCTTCTAACAGCCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAAAATGAGATGACACA</genome_strand>
        <mrna_strand>CCCTATTCTCTTTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAAAATGAGATGACACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E371974" ref_strand="+" ref_description="SGN-E371974 [TUS-30-G2]">
      <seq>aaaaactcgtcggcttcgaaattcctatctgggttttgctcagaattgaatttcggtaattgggttcttctcaaaattcaaaatttccaacagccttgagcttctggatattgatggcaaccccagaaaccgcagctcctccagcaacccctactgagaataatgagatggtgccgaaaaatgagatgatacatgagcatggtgatgagatggtgccgcaaaatgagatgatacatgagcatggtgatgagatggtgccgcaaaatgagatgatacatgagcaaagccatgagattgtgccggaaaatgagatgcaaaatgagatgatacatgagattgtgccggaaaatgagatgcaaaatgagatgatacatgagcacagccatgacattgtgcctgaaaatgagatgcaaaatgagcacagccatgagattatgccggaaaatgagatgatacgtgagcacagccatgagattgtgcgggaaaatgagatgatacctgagcacaatcatgagatagtgccggaaaatgagatgatacatgagtgcagtcacgagacagtgccacaaaatgagatggtacatgagcatagtcatgaaatggtgccagataatgagatgacacatgagcacactcacgagatggtngccgaaaatgagatgacacatgatcataatcacgagatggtgcaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23907" stop="20722"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23607" g_stop="23515" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21623" g_stop="21022" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="695" r_length="602" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E371974" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E371974" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23607" e_stop="23515"/>
          <exon e_start="21623" e_stop="21022"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAGGTATGGTAGTAGTACTACCCCCTTTTGTTCAATTCAGATTTGATTTAGTTTTTCATTTTTTTAAATCGATTTTTAGCTATGGATTTACTGTGTTAGTGTGAAGATTTGTGTAAAATGTGTGCTGAATAAGATTTTAAAGGTTTATGTTCTTAGATTTTGATATTTCAGTATCTGTTGTGAGGTATTTGAAGCTTCTTAGGCTCATTTCAAAGTTTAGCTGATGTGTTTTGTTAAAAAAGTTGGGATTTTTTTATCTTTTTATTGATGTTCTGGGCTGGAAGTTTGCAGGTTTAATGAAATTCAAGGCTGTATGTGAAATATTGATGAAGTTTTTGGTTGAATTTTTTGTCTGGGTAGTGTAATAGATCCATTGTTAGTAAAAAAGAGGATTTTGATCTGGGCTTTGTTTAGATTTATCTATAAGCCCATGTTTGATCCATTTTCGGAGTTAGATTTTTGTAAGTTGATGTTTCTATCTTGTTAGCCCATGTGTTGTAAAATGTCCATTTTAGCCCTGACTTCCATTGAAAATAGAGTTTTACTCTCCTTGTTGCCTTAGGAGGACTAGTAGTATTTAGCTTTGGGTTAGGTGTGGGTTCGGGCCGGGCCGGGCCGGTGGAGGTAACACCGGGCTTTCCGAGATGCTCCACGGGCTATATTGTTCTGCTACGAGGAACTAATTTGGTGTAGTTTGTTGGCTAAAGCTTTGAGTCTCATGTACTATTTGTCCGAAGAGTGAGTTTAGGGAGCTGTTTGTCCATTGATTTTGTTTTGAACATTTGAAATAATATATGGAGATTATTTCAAGTAAGTATTTGCTTATCATACTGACCCATTGTTTCAACTTCAAACTTGAAATATGGAATTTGAAGTTTAAATTGTCATTCGTGCACCTGTCCTCAATGGAAGAATGAGTGATTTGTCAACCCTGGACAGGTGGCGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGGGAATTTCCGGTGGAGCAGTGAAATGCGTAGTGAGCGGAGAGTTTTTCAAGTTTAACTCACCAAAACTTCCAACTATGTTTTCATATCTAAATACAATTTCAACTTCAACTTCCAAGTACCATTTGGTTAACTTAACGTCTGATTTTTTCTCCAAATATCAACCAATTCATGCACAAATGCCTACTAAGTATGGTTGAAGCAATGGAGTTGCAGCCTAAGGTTTGCAACTTCATGCGACATTCATTAGGTGCAGGGTTCAATACCTACTGATAGCCATTGGCTGCAACTCAATACTGAATCTCTATGGTGCAAGGTTCAATTCCTACATATGGCTCTCCCTTAATCCAGAAACAGTATAAAACACCGTGTTTACTTTGCAGCTTCATGACAAATCCAAGGAACCACCTTTATTCTGCTTGATAGAAGCTAAGGTGCAACATTAACATTTGTTGTGGACCTAAGCTTACAAAGGATGCAAAGCCCTTACCAGAAATGGATGATGCATTCAGCTCCGCTGTAGCCATTTCTTTCTTTTCAAGGAAAGATCTTGGACTGATAGCCACGGAGGGTTTTCTCTAAAACTGACTGAGGAGTGAATGAGGTGTGATTTTAGACTTATCAAAGATATAATACGTCGAGCTGTGAAGTATATCAAAACAGACACTAGTTTACAGAGGGAGGAGGAAGAAAGAGAATTCGTATTGATTTTTTTAACACAAAAGAATCTTAGTTTCCTGAGAGTCATTACAGAAAATGCACACACACGCACGCATCCATGATGGTGTTCTTTTCGGGCATGTGTTTTGTGTGGTCGCTCTTCTTTTCTTCTGTTCACAATATATACGATTTTTGTTTTCTTTCTCCTTATTTATTGTTATATTATACAGATAATTGATAAGTGTTGTGCTTCTAACAGCCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAA</genome_strand>
        <mrna_strand>AAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTNGCCGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E443439" ref_strand="+" ref_description="SGN-E443439 [cSTA-37-L16]">
      <seq>tcgagggttccaaagcccaattctctttctctctcatccagctaccggccgaaaaccctagatctgattcacctacccgagccctgaaaaactcgtcggcttcgaaattcctatctgggttccgctcacaattgaatttccgtaattgggttcttctgaaaattcaaaatttcctacagccttgagcttctggatattgatggcgaccccagaaaccacagctactccagcaacccccactgagaataatgagacagtgccgaccaatgagatgattcatgagcatggtgatgaaatggtgccgcctaatgagatgatacatgagcacagccatgagattgtgctggaaaatgagatgatacatgagcacagccatgagattgtgccggaaaatgagatgatacacgagcacagccatgagattgtgccgcaaaacgagatgatacatgagcatagtcatgagattgtgccggaaaatgagatgatacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23976" stop="20958"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23666" g_stop="23515" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="179" r_length="156" r_score="0.895"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21623" g_stop="21490" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="313" r_length="134" r_score="0.910"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="21489" i_stop="21352" i_length="138">
            <donor d_prob="0.000" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="21351" g_stop="21174" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="314" r_stop="491" r_length="178" r_score="0.910"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E443439" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.945" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E443439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23666" e_stop="23515"/>
          <exon e_start="21623" e_stop="21490"/>
          <exon e_start="21351" e_stop="21174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTCTCTCTCCTCCAGCTA-CGGCCGAAAA-CCTAGATCTGATTCA-CTACCGGAGCC-TGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAGGTATGGTAGTAGTACTACCCCCTTTTGTTCAATTCAGATTTGATTTAGTTTTTCATTTTTTTAAATCGATTTTTAGCTATGGATTTACTGTGTTAGTGTGAAGATTTGTGTAAAATGTGTGCTGAATAAGATTTTAAAGGTTTATGTTCTTAGATTTTGATATTTCAGTATCTGTTGTGAGGTATTTGAAGCTTCTTAGGCTCATTTCAAAGTTTAGCTGATGTGTTTTGTTAAAAAAGTTGGGATTTTTTTATCTTTTTATTGATGTTCTGGGCTGGAAGTTTGCAGGTTTAATGAAATTCAAGGCTGTATGTGAAATATTGATGAAGTTTTTGGTTGAATTTTTTGTCTGGGTAGTGTAATAGATCCATTGTTAGTAAAAAAGAGGATTTTGATCTGGGCTTTGTTTAGATTTATCTATAAGCCCATGTTTGATCCATTTTCGGAGTTAGATTTTTGTAAGTTGATGTTTCTATCTTGTTAGCCCATGTGTTGTAAAATGTCCATTTTAGCCCTGACTTCCATTGAAAATAGAGTTTTACTCTCCTTGTTGCCTTAGGAGGACTAGTAGTATTTAGCTTTGGGTTAGGTGTGGGTTCGGGCCGGGCCGGGCCGGTGGAGGTAACACCGGGCTTTCCGAGATGCTCCACGGGCTATATTGTTCTGCTACGAGGAACTAATTTGGTGTAGTTTGTTGGCTAAAGCTTTGAGTCTCATGTACTATTTGTCCGAAGAGTGAGTTTAGGGAGCTGTTTGTCCATTGATTTTGTTTTGAACATTTGAAATAATATATGGAGATTATTTCAAGTAAGTATTTGCTTATCATACTGACCCATTGTTTCAACTTCAAACTTGAAATATGGAATTTGAAGTTTAAATTGTCATTCGTGCACCTGTCCTCAATGGAAGAATGAGTGATTTGTCAACCCTGGACAGGTGGCGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGGGAATTTCCGGTGGAGCAGTGAAATGCGTAGTGAGCGGAGAGTTTTTCAAGTTTAACTCACCAAAACTTCCAACTATGTTTTCATATCTAAATACAATTTCAACTTCAACTTCCAAGTACCATTTGGTTAACTTAACGTCTGATTTTTTCTCCAAATATCAACCAATTCATGCACAAATGCCTACTAAGTATGGTTGAAGCAATGGAGTTGCAGCCTAAGGTTTGCAACTTCATGCGACATTCATTAGGTGCAGGGTTCAATACCTACTGATAGCCATTGGCTGCAACTCAATACTGAATCTCTATGGTGCAAGGTTCAATTCCTACATATGGCTCTCCCTTAATCCAGAAACAGTATAAAACACCGTGTTTACTTTGCAGCTTCATGACAAATCCAAGGAACCACCTTTATTCTGCTTGATAGAAGCTAAGGTGCAACATTAACATTTGTTGTGGACCTAAGCTTACAAAGGATGCAAAGCCCTTACCAGAAATGGATGATGCATTCAGCTCCGCTGTAGCCATTTCTTTCTTTTCAAGGAAAGATCTTGGACTGATAGCCACGGAGGGTTTTCTCTAAAACTGACTGAGGAGTGAATGAGGTGTGATTTTAGACTTATCAAAGATATAATACGTCGAGCTGTGAAGTATATCAAAACAGACACTAGTTTACAGAGGGAGGAGGAAGAAAGAGAATTCGTATTGATTTTTTTAACACAAAAGAATCTTAGTTTCCTGAGAGTCATTACAGAAAATGCACACACACGCACGCATCCATGATGGTGTTCTTTTCGGGCATGTGTTTTGTGTGGTCGCTCTTCTTTTCTTCTGTTCACAATATATACGATTTTTGTTTTCTTTCTCCTTATTTATTGTTATATTATACAGATAATTGATAAGTGTTGTGCTTCTAACAGCCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATG</genome_strand>
        <mrna_strand>TCTTTCTCTCTCATCCAGCTACCGGCCGAAAACCCTAGATCTGATTCACCTACCCGAGCCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTCCGCTCACAATTGAATTTCCGTAATTGGGTTCTTCTGAAAATTCAAAATTTCCTACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAGCTTCTGGATATTGATGGCGACCCCAGAAACCACAGCTACTCCAGCAACCCCCACTGAGAATAATGAGACAGTGCCGACCAATGAGATGATTCATGAGCATGGTGATGAAATGGTGCCGCCTAATGAG..........................................................................................................................................ATGATACATGAGCACAGCCATGAGATTGTGCTGGAAAATGAGATGATACATGAGCACAGCCATGAGATTGTGCCGGAAAATGAGATGATACACGAGCACAGCCATGAGATTGTGCCGCAAAACGAGATGATACATGAGCATAGTCATGAGATTGTGCCGGAAAATGAGATGATACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E283043" ref_strand="+" ref_description="SGN-E283043 [cLER-17-L9]">
      <seq>aaaaactcgtcggcttcgaaattcctatctgggttttgctcagaattgaatttcggtaattgggttcttctcaaaattcaaaatttccaacagccttgagcttctggatattgatggcaaccccagaaaccgcagctcctccagcaacccctactgagaataatgagatggtgccgaaaaatgagatgatacatgagcatggtgatgagatggtgccgcaaaatgagatgatacatgagcatggtgatgagatggtgccgcaaaatgagatgatacatgagcaaagccatgagattgtgccggaaaatgagatgcaaaatgagatgatacatgagattgtgccggaaaatgagatgcaaaatgagatgatacatgagcacagccatgacattgtgcctgaaaatgagatgcaaaatgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23907" stop="20998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23607" g_stop="23515" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21623" g_stop="21298" g_length="326"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="419" r_length="326" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E283043" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E283043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23607" e_stop="23515"/>
          <exon e_start="21623" e_stop="21298"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAGGTATGGTAGTAGTACTACCCCCTTTTGTTCAATTCAGATTTGATTTAGTTTTTCATTTTTTTAAATCGATTTTTAGCTATGGATTTACTGTGTTAGTGTGAAGATTTGTGTAAAATGTGTGCTGAATAAGATTTTAAAGGTTTATGTTCTTAGATTTTGATATTTCAGTATCTGTTGTGAGGTATTTGAAGCTTCTTAGGCTCATTTCAAAGTTTAGCTGATGTGTTTTGTTAAAAAAGTTGGGATTTTTTTATCTTTTTATTGATGTTCTGGGCTGGAAGTTTGCAGGTTTAATGAAATTCAAGGCTGTATGTGAAATATTGATGAAGTTTTTGGTTGAATTTTTTGTCTGGGTAGTGTAATAGATCCATTGTTAGTAAAAAAGAGGATTTTGATCTGGGCTTTGTTTAGATTTATCTATAAGCCCATGTTTGATCCATTTTCGGAGTTAGATTTTTGTAAGTTGATGTTTCTATCTTGTTAGCCCATGTGTTGTAAAATGTCCATTTTAGCCCTGACTTCCATTGAAAATAGAGTTTTACTCTCCTTGTTGCCTTAGGAGGACTAGTAGTATTTAGCTTTGGGTTAGGTGTGGGTTCGGGCCGGGCCGGGCCGGTGGAGGTAACACCGGGCTTTCCGAGATGCTCCACGGGCTATATTGTTCTGCTACGAGGAACTAATTTGGTGTAGTTTGTTGGCTAAAGCTTTGAGTCTCATGTACTATTTGTCCGAAGAGTGAGTTTAGGGAGCTGTTTGTCCATTGATTTTGTTTTGAACATTTGAAATAATATATGGAGATTATTTCAAGTAAGTATTTGCTTATCATACTGACCCATTGTTTCAACTTCAAACTTGAAATATGGAATTTGAAGTTTAAATTGTCATTCGTGCACCTGTCCTCAATGGAAGAATGAGTGATTTGTCAACCCTGGACAGGTGGCGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGGGAATTTCCGGTGGAGCAGTGAAATGCGTAGTGAGCGGAGAGTTTTTCAAGTTTAACTCACCAAAACTTCCAACTATGTTTTCATATCTAAATACAATTTCAACTTCAACTTCCAAGTACCATTTGGTTAACTTAACGTCTGATTTTTTCTCCAAATATCAACCAATTCATGCACAAATGCCTACTAAGTATGGTTGAAGCAATGGAGTTGCAGCCTAAGGTTTGCAACTTCATGCGACATTCATTAGGTGCAGGGTTCAATACCTACTGATAGCCATTGGCTGCAACTCAATACTGAATCTCTATGGTGCAAGGTTCAATTCCTACATATGGCTCTCCCTTAATCCAGAAACAGTATAAAACACCGTGTTTACTTTGCAGCTTCATGACAAATCCAAGGAACCACCTTTATTCTGCTTGATAGAAGCTAAGGTGCAACATTAACATTTGTTGTGGACCTAAGCTTACAAAGGATGCAAAGCCCTTACCAGAAATGGATGATGCATTCAGCTCCGCTGTAGCCATTTCTTTCTTTTCAAGGAAAGATCTTGGACTGATAGCCACGGAGGGTTTTCTCTAAAACTGACTGAGGAGTGAATGAGGTGTGATTTTAGACTTATCAAAGATATAATACGTCGAGCTGTGAAGTATATCAAAACAGACACTAGTTTACAGAGGGAGGAGGAAGAAAGAGAATTCGTATTGATTTTTTTAACACAAAAGAATCTTAGTTTCCTGAGAGTCATTACAGAAAATGCACACACACGCACGCATCCATGATGGTGTTCTTTTCGGGCATGTGTTTTGTGTGGTCGCTCTTCTTTTCTTCTGTTCACAATATATACGATTTTTGTTTTCTTTCTCCTTATTTATTGTTATATTATACAGATAATTGATAAGTGTTGTGCTTCTAACAGCCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAG</genome_strand>
        <mrna_strand>AAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E205772" ref_strand="+" ref_description="SGN-E205772 [cLEC-20-A1]">
      <seq>aacaatttgttaatttaaatccattagccactcttgctcatcttttaagtatcttgttggattttatttgccctgatttcttaccataaataggttttccttttaggaaaaggttttgaattgactaatccttttcttgtaggaaaaggtttaggactctataaatagatgaatattccttttaacttaatcagcattcacaatgtactcttacaggctttgagagttttggttagagggagaatctgtgggtcacaagcttgatatgttatcacttgtgtgaacctcccatgtattctgagtgaattggttgaggttgattctctctgtattttgtactcttatatttatagtggattgctcatctcctttgtggacgtaggttgattgaccgaaccacgttaaatctttgtgtcttttgatatatttctcgttgtcttcttactcgtggtctttcgaggtttgtattgctagcttccgcgtttacacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="29086" stop="28047"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28793" g_stop="28347" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="490" r_length="447" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E205772" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28793" e_stop="28347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAGTGTTCGTGTTGGATTTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTCTTAGGAAAAGATTTTGAATTGACTAATCCTTTTTTGGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGGGCTTTGAGAGTTTTGGTTAG-GGGAGAATTTATGGGTCACAAGCTTGATACGTTATTGCTTGTGTGAACCTCCCATGTATTCTGAGTGAATTGGTTGAGGTTGTTTCCCTCTGTATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTTTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCATGGTCTTTCGAGATTTGCGTTGCTAGCTTTCGCGTTTACACC</genome_strand>
        <mrna_strand>TTTAAGT-ATCTTGTTGGATTTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTTTTAGGAAAAGGTTTTGAATTGACTAATCCTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGATGAATATTCCTTTTAACTTAATCAGCATTCACAATGTACTCTTACAGGCTTTGAGAGTTTTGGTTAGAGGGAGAATCTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTCCCATGTATTCTGAGTGAATTGGTTGAGGTTGATTCTCTCTGTATTTTGTACTCTTATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTTGATTGACCGAACCACGTTAAATCTTTGTGTCTTTTGATATATTTCTCGTTGTCTTCTTACTCGTGGTCTTTCGAGGTTTGTATTGCTAGCTTCCGCGTTTACACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E205773" ref_strand="+" ref_description="SGN-E205773 [cLEC-20-A3]">
      <seq>aacaattagttaatttaaatccattagccactcttgctcatcttttaagtatcttgttggattttatttgccctgatttcttaccataaataggttttccttttaggaaaaggttttgaattgactaatccttttcttgtaggaaaaggtttaggactctataaatagatgaatattccttttaacttaatcagcattcacaatgtagtcttacaggctttgagagttttggttagagggagaatctgtgggtcacaagcttgatatgttatcacttgtgtgaacctaccatgtattctgagtgaattggttgaagctgtttctctctgtattttgtactcttatatttatagtggattgctcatctactttgtggacgtaggttgattgaccgaaccacgttaaatctttgtgtcttttgatatatttctcgatggcttcttactcgtggtcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="29086" stop="28081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28793" g_stop="28381" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="456" r_length="413" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E205773" ref_strand="+">
        <total_alignment_score>0.923</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="0.906" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205773" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28793" e_stop="28381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAGTGTTCGTGTTGGATTTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTCTTAGGAAAAGATTTTGAATTGACTAATCCTTTTTTGGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGGGCTTTGAGAGTTTTGGTTAG-GGGAGAATTTATGGGTCACAAGCTTGATACGTTATTGCTTGTGTGAACCTCCCATGTATTCTGAGTGAATTGGTTGAGGTTGTTTCCCTCTGTATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTTTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCATGGTCTTT</genome_strand>
        <mrna_strand>TTTAAGT-ATCTTGTTGGATTTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTTTTAGGAAAAGGTTTTGAATTGACTAATCCTTTTCTTGTAGGAAAAGGTTTAGGACTCTATAAATAGATGAATATTCCTTTTAACTTAATCAGCATTCACAATGTAGTCTTACAGGCTTTGAGAGTTTTGGTTAGAGGGAGAATCTGTGGGTCACAAGCTTGATATGTTATCACTTGTGTGAACCTACCATGTATTCTGAGTGAATTGGTTGAAGCTGTTTCTCTCTGTATTTTGTACTCTTATATTTATAGTGGATTGCTCATCTACTTTGTGGACGTAGGTTGATTGACCGAACCACGTTAAATCTTTGTGTCTTTTGATATATTTCTCGATGGCTTCTTACTCGTGGTCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E262800" ref_strand="+" ref_description="SGN-E262800 [cLEG-63-P6]">
      <seq>cttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="40539" stop="39562"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40239" g_stop="39845" g_length="395"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E262800" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>395</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40239" e_stop="39845"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCTGAAAATGGCTAT-AAAGGAAGTCAATTTTTGATTTTTTAATAACTGAAAAAAAAAATTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAACAAGTACATTCATTGTT</genome_strand>
        <mrna_strand>CTTGCTGAAAATGGCTATAAAAGGAAGTCAAATTTTGATTTTTTAAACACTGAAAATTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E258205" ref_strand="+" ref_description="SGN-E258205 [cLEG-49-B23]">
      <seq>aatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctggttctgtttattaactttataaataaaaggtattataagagtaacaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="40478" stop="39562"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40186" g_stop="39859" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E258205" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>328</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258205" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40186" e_stop="39859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAATTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAACAA</genome_strand>
        <mrna_strand>AATTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGGTTCTGTTTATTAACTTTATAAATAAAAGGTATTATAAGAGTAACAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E419244" ref_strand="+" ref_description="SGN-E419244 [STM-29-A12]">
      <seq>ttttttttttgattttgtgggatcttcttcacaatatttactcctgatattgctgaattaccacgcgacctcttttctgcggccttgttatcctcttcgattctcagccttaccatgagatcttcaacagtcatctccttgcgtttatgtttcaagtagtttttgaagtccttccacaatggaggtaacttctctataatggcagccacttgaaaagcatcattcacaaccaatccttcagcaaggagatcatggattatgacctgcaattcttgaacttgggtgacgacggtcttactgtctatcatcttatagtccagaaactttgccacaataaatttcttcattccggcatcctctgttttgtacttcttttctaaagcatcccagagttcttttgaggttttcacattactgtacacattgtatagatcatcctgcaggccactcagaatataatttttacacaaaaaatcagaatgtgtccatgcttctgttaccaagaatcgttcttcaggcggagtttcatccgacataacaggaacgttctcattaatgaacctctgcagactcaatgtagtcagatagaaagacatcttttgctgccatctcttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="43312" stop="44529"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43613" g_stop="44229" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="616" r_length="616" r_score="0.908"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E419244" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419244" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="43613" e_stop="44229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTTTCTTTAATTTTGTGGAATCTTCTTCCACAAAATTTACTCCAGATATTGCTGAATTATCACGTGACCTCTTTTCTGCAGCCTTATTATCCTCTTCGATTCTCAACCTTAGTATGAGATCTTCAACAGTCATCTCATTGCGTTTGTGTTTCAAGTAGTTTTTAAAGTCCTTCCACAATGGAGGTAACTTTTCAATAATTGCAGCCACTTGAAAAGCATCATTCATAATTAATCCTTCAGCAAGGAGATCATGTATTATGACCTGCAATTCTTGAACTTGGGTGACGACAGTCTTACTGTCTATCATCTTAAAGTCCAGAAATTTTGCCACAATGAATTTCTTCATTCCGGCATCTTCTGTTTTGTACTTCTTTTCTAAAGCATCCCAGAGTTCTTTTGAGGTTTTTGCATTGTTGTACACATTGTACAGATCATCTTGTAGACCACTCAAAATATAATTTTTACACAAAAAATCTGAGTGTGTCCATGCTTCTGTTACCAATAATCGTTCATCAGCCAAAGTTTCATCTGACATAACAGGAACATTCTCTTTGATGAACTTCTGCAGACTCAACATAGTGAGATAGAAGAACATCTTTTGCTACCATCTCTTAA</genome_strand>
        <mrna_strand>TTTTTTTTTTGATTTTGTGGGATCTTCTT-CACAATATTTACTCCTGATATTGCTGAATTACCACGCGACCTCTTTTCTGCGGCCTTGTTATCCTCTTCGATTCTCAGCCTTACCATGAGATCTTCAACAGTCATCTCCTTGCGTTTATGTTTCAAGTAGTTTTTGAAGTCCTTCCACAATGGAGGTAACTTCTCTATAATGGCAGCCACTTGAAAAGCATCATTCACAACCAATCCTTCAGCAAGGAGATCATGGATTATGACCTGCAATTCTTGAACTTGGGTGACGACGGTCTTACTGTCTATCATCTTATAGTCCAGAAACTTTGCCACAATAAATTTCTTCATTCCGGCATCCTCTGTTTTGTACTTCTTTTCTAAAGCATCCCAGAGTTCTTTTGAGGTTTTCACATTACTGTACACATTGTATAGATCATCCTGCAGGCCACTCAGAATATAATTTTTACACAAAAAATCAGAATGTGTCCATGCTTCTGTTACCAAGAATCGTTCTTCAGGCGGAGTTTCATCCGACATAACAGGAACGTTCTCATTAATGAACCTCTGCAGACTCAATGTAGTCAGATAGAAAGACATCTTTTGCTGCCATCTCTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E251204" ref_strand="+" ref_description="SGN-E251204 [cLEG-10-L14]">
      <seq>tcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagtggtctgcaagatgatctgtacaatgtgtacagcaatgcaaaaacctcaaaagaactctgggatgctttagaaaagaagtacaaaacagaagatgccggaatgaagaaattcattgtggcaaaatttctagactttaagatgatagacagtaagactgtcgtcacccaagttcaagaattgcaggttataatccatgatctccttgctgaaggattgattgtgaatgatgcttttcaagtggctgcaattattgaaaagttacctctattgtggaaggactttaaaaactacttgaaacacaaacgcaaggagatgattgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44644" stop="43437"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44344" g_stop="43737" g_length="608"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="608" r_length="608" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E251204" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44344" e_stop="43737"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTACAAGATGATCTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATACATGATCTCCTTGCTGAAGGATTAATTATGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAATGAGATGACTGTTGA</genome_strand>
        <mrna_strand>TCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTACAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTAGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTTATAATCCATGATCTCCTTGCTGAAGGATTGATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCTATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAAGGAGATGATTGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E261540" ref_strand="+" ref_description="SGN-E261540 [cLEG-57-K8]">
      <seq>taaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagtggtctgcaagatgatctgtacaatgtgtacagcaatgcaaaaacctcaaaagaactctgggatgctttagaaaagaagtacaaaacagaagatgccggaatgaagaaattcattgtggcaaaatttctagactttaagatgatagacagtaagactgtcgtcacccaagttcaagaattgcaggttataatccatgatctccttgctgaaggattgattgtgaatgatgcttttcaagtggctgcaattattgaaaagttacctcctattgtggaaggactttaaaaactacttgaaacacaaacgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44824" stop="43452"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44524" g_stop="43752" g_length="773"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="772" r_length="772" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E261540" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44524" e_stop="43752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTACAAGATGATCTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATACATGATCTCCTTGCTGAAGGATTAATTATGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCC-ATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAA</genome_strand>
        <mrna_strand>TAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTACAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTAGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTTATAATCCATGATCTCCTTGCTGAAGGATTGATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCTATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E262550" ref_strand="+" ref_description="SGN-E262550 [cLEG-63-C22]">
      <seq>ttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctgggacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaactgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaattatattttgagtggtctgcaagatgatctgtancatgtgtacagcaatgcaaaaacctcaaaagaactctgggatgctttagaaaagaagtacaaacagaagatgccggaaatgagaaaatcattgtgggcaaatttctagacttttagatgatagacagtaagactgtcgtcacccaagtttcagaattgcaggttataatccatgatctccttgctgaaaggatgattgtgaatgatgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44857" stop="43527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44558" g_stop="43827" g_length="732"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="727" r_length="727" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E262550" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44558" e_stop="43827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTACAAGATGATCTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATACATGATCTCCTTGCTGAAGGATTAATTATGAATGATGCTTT</genome_strand>
        <mrna_strand>TTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGGACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAA-CTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGT-AAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTANCATGTGTACAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTAC-AAACAGAAGATGCCGGAAATGAGAAAATCATTGTGGGCAAATTTCTAGACTTTTAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTTCAGAATTGCAGGTTATAATCCATGATCTCCTTGCTGAAAGGATGATTGTGAATGATGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E542858" ref_strand="-" ref_description="SGN-E542858 [TUS-64-G1]">
      <seq>gaacagatttcacagaacagacacgttccttgctgaaaattgctataaaggaagtcaattttgattttcaaacactgaaaattttccttctcngtattatttttctctaaaaaaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgctgttctgaagtttgctgaagttaaagaagtttgagaaaaaaaaagactaactcaagtcaaacaaatgctggaatagtaagtgctgcaacaacatcggctgcacataatcattcagatgctatcttagcggcggctgagaaacctgcagagttttctggagtcgactttgagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcattaatgagaatgttcctgtttatcagatgaaactccggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagtggtctgcaagatgaacaacaatgccaaaacctcaaagaactcttggatgctttagaaaagaagtacaaaacagaagatgccggaatgaagaaattcattgtggtaaaatttttggactataagatgatagacaataagactgtcgtcacccaagttcaagaattgcaggtcataatccatgatctgtgctgaatgtataaatttatttaatgcctatgttagaaatattaagttttcccttaataaatttatttaattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45282" stop="43560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44982" g_stop="44788" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.903"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44787" i_stop="44361" i_length="427">
            <donor d_prob="0.759" d_score="0.94"/>
            <acceptor a_prob="0.970" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="44360" g_stop="43864" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="670" r_length="481" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="748" polyA_stop="757"/>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E542858" ref_strand="-">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542858" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="44982" e_stop="44788"/>
          <exon e_start="44360" e_stop="43864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAGATTTCACTGAACAGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAGAAATTTAACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTACAAGATGATCTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATACATG</genome_strand>
        <mrna_strand>GAACAGATTTCACAGAACAGACACGTTCCTTGCTGAAAATTGCTAT-AAAGGAAGTCAA-TTTTGA-TTTTCAAACACTGAAAA-TTTTCCTTCTCNGTATT-ATTTTTCTCT-AAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTGAAGTTTGCTGAAGTTAAAGAAGTTTGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAGACTAACTCAAGTCAAACAAATGCTGGAATAGTAAGTGCTGCAACAACATCGGCTGCACATAATCATTCAGATGCTATCTTAGCGGCGGCTGAGAAACCTGCAGAGTTTTCTGGAGTCGACTTTGAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATTAATGAGAATGTTCCTGTT-TATCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGC-A-A-GA--TG----A-----ACAACAATGCCAAAACCTC-AAAGAACTCTTGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGTAAAATTTTTGGACTATAAGATGATAGACAATAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATCCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E253427" ref_strand="+" ref_description="SGN-E253427 [cLEG-24-L5]">
      <seq>tggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctggttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44976" stop="43760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44676" g_stop="44060" g_length="617"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="611" r_length="611" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E253427" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44676" e_stop="44060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGT</genome_strand>
        <mrna_strand>TGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTG-----G-TTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E261066" ref_strand="+" ref_description="SGN-E261066 [cLEG-65-C11]">
      <seq>tttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcataaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagatttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagatttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45093" stop="43782"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44793" g_stop="44082" g_length="712"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E261066" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>712</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44793" e_stop="44082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTGGTAACAGAAGCATGGACACACTCAGATTTTTT</genome_strand>
        <mrna_strand>TTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCATAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGATTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E258047" ref_strand="+" ref_description="SGN-E258047 [cLEG-48-K15]">
      <seq>ttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44857" stop="43814"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44558" g_stop="44114" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="443" r_length="443" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E258047" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44558" e_stop="44114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTG</genome_strand>
        <mrna_strand>TTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E263584" ref_strand="+" ref_description="SGN-E263584 [cLEG-60-L13]">
      <seq>tgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45133" stop="43821"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44833" g_stop="44121" g_length="713"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="707" r_length="707" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E263584" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>713</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E263584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44833" e_stop="44121"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACG</genome_strand>
        <mrna_strand>TGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E276669" ref_strand="+" ref_description="SGN-E276669 [cLEN-14-A16]">
      <seq>ttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45092" stop="43852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44792" g_stop="44152" g_length="641"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E276669" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44792" e_stop="44152"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTG</genome_strand>
        <mrna_strand>TTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E273518" ref_strand="+" ref_description="SGN-E273518 [cLEN-6-E15]">
      <seq>ggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45232" stop="43974"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44932" g_stop="44274" g_length="659"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E273518" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44932" e_stop="44274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGC</genome_strand>
        <mrna_strand>GGAAGTCAAATTTTGATTTTTTAAACACTGAAAATTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E254845" ref_strand="+" ref_description="SGN-E254845 [cLEG-33-L11]">
      <seq>aggaagtcaaattttgattttttaaacactgaaaatttggctttcggtgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtaccagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagaataaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagaattgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45233" stop="44038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44933" g_stop="44338" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E254845" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44933" e_stop="44338"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTA-CAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTC</genome_strand>
        <mrna_strand>AGGAAGTCAAATTTTGATTTTTTAAACACTGAAAATTTGGCTTTCGGTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACCAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGAATAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGAATTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAG-AAAAAAAAGACTAATTCAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E262710" ref_strand="+" ref_description="SGN-E262710 [cLEG-63-E14]">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45263" stop="44054"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44964" g_stop="44354" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E262710" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44964" e_stop="44354"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAA</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAATTTTGATTTTTTAAACACTGAAAATTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E369760" ref_strand="+" ref_description="SGN-E369760 [TUS-25-O3]">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatactta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45263" stop="44083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44964" g_stop="44383" g_length="582"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="577" r_length="577" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E369760" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>582</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44964" e_stop="44383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTA</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAATTTTGATTTTTTAAACACTGAAAATTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E255327" ref_strand="+" ref_description="SGN-E255327 [cLEG-30-E2]">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgatttttgaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaacttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45263" stop="44146"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44964" g_stop="44446" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E255327" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44964" e_stop="44446"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAG-AAATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTA</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAATTTTGATTTTTGAAACACTGAAAATTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E375521" ref_strand="+" ref_description="SGN-E375521 [TUS-34-B10]">
      <seq>tggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44976" stop="44183"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44676" g_stop="44482" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E375521" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>195</cumulative_length_of_scored_exons>
        <coverage percentage="1.021" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44676" e_stop="44482"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAGAA-ATTTA-ACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATT</genome_strand>
        <mrna_strand>TGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTC------TGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E261310" ref_strand="+" ref_description="SGN-E261310 [cLEG-68-F10]">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45263" stop="44438"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44964" g_stop="44738" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E261310" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>227</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44964" e_stop="44738"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATT</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAATTTTGATTTTTTAAACACTGAAAATTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E412642" ref_strand="+" ref_description="SGN-E412642 [STM-16-J3]">
      <seq>gtcgagtaactccctatctggcccactgcctagcaacccaagcatgcttcaaaagctaacttctgtggatttgtcatacaactcactgaatggtaccataccatcttgggtgtttagcctaccttttctatcttcagtgttgctccaacataaccgattcagaggactagccgatgaagtgatcaaaataaacccaacattaaaagaactgcatttaagcaataatcaactcagtggttcttttcctcaatcacttgtgaatctcacaaatctttttacccttgacatttcatcaaataacatcaccattgatgagggaatgaatatcacctttcttagcctatcatctttattcttatcatcttgtgaactgaagcattttccatacttcttgagaaatgtaaagacacttgtctacttggatatttctaacaataagattcgtggtcaaatccctaactggtttagcggcatgagatgggactcattacaattcctaaacctttctcataattcattgacaggccacctaccacaatttcattactataacgtacagtgtcttgatctgaaatttaactcccttcaggntccactaccttcatccatttgtaacatgagttcgcttagctttatagatttatcacgcaacaacttcagtgactcagttccacattgcttggggaagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45828" stop="53465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46128" g_stop="46816" g_length="689"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="690" r_length="690" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E412642" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>689</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E412642" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46128" e_stop="46816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCGAGTAATTCCCTATCTGGCCCACTGCCTAGCAACACAAGCATGCTTCCAAAACTAATCCATCTAAATTTGTCATACAACTCACTGAATGGTACCATACCATCTTGGGTGTTTAGCCTACCTTTGCTATATTCAGTGTCCCTCCAACATAACCGATTCAGAGGACTAGCCGATGAAGTGATCAAAACAAACCCAACATTAAAAGAACTGCATTTAAGCAATAATCAACTCAGTGGTTCTTTTCCTCAATCACTTGCGAATCTCACAAACCTTGAAACCCTTGGAATTTCATCAAATAACATCACCGTTGATGAGGGAATGAATATCACCTTTCTTAGCCTATCATCTTTATTCTTATCATCTTGTCAACTGAAGCATTTTCCATACTTCTTGAGAAATGTAAACACACTTGTGTACTTGGATATTTCTAACAATAAGATTTCTGGTCAAATCCCTAACTGGTTTAGCGGCATGAGGTGGGACTCGTTGATTTTCTTAAACCTTTCTCATAATTCATTAACAGGCAACCTACCACAATTTCGTTACGATAACCTAGGGTATCTTGATCTGAAATTTAACTCCCTTCAGGGTCCACTACCTTCATCCATTTGTAACATGAGCAAACTTATGTTATTAGATTTATCACACAACTACTTAAGCAACTCAGTTCCACATTGCTT-GGGAAGCA</genome_strand>
        <mrna_strand>GTCGAGTAACTCCCTATCTGGCCCACTGCCTAGCAACCCAAGCATGCTTCAAAAGCTAACTTCTGTGGATTTGTCATACAACTCACTGAATGGTACCATACCATCTTGGGTGTTTAGCCTACCTTTTCTATCTTCAGTGTTGCTCCAACATAACCGATTCAGAGGACTAGCCGATGAAGTGATCAAAATAAACCCAACATTAAAAGAACTGCATTTAAGCAATAATCAACTCAGTGGTTCTTTTCCTCAATCACTTGTGAATCTCACAAATCTTTTTACCCTTGACATTTCATCAAATAACATCACCATTGATGAGGGAATGAATATCACCTTTCTTAGCCTATCATCTTTATTCTTATCATCTTGTGAACTGAAGCATTTTCCATACTTCTTGAGAAATGTAAAGACACTTGTCTACTTGGATATTTCTAACAATAAGATTCGTGGTCAAATCCCTAACTGGTTTAGCGGCATGAGATGGGACTCATTACAATTCCTAAACCTTTCTCATAATTCATTGACAGGCCACCTACCACAATTTCATTACTATAACGTACAGTGTCTTGATCTGAAATTTAACTCCCTTCAGGNTCCACTACCTTCATCCATTTGTAACATGAGTTCGCTTAGCTTTATAGATTTATCACGCAACAACTTCAGTGACTCAGTTCCACATTGCTTGGGGAAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E465444" ref_strand="+" ref_description="SGN-E465444 [cPRO-21-K1]">
      <seq>gacaggtttccattttggctcggaactcttgaatacctacaggtccttatattaaagtcgaacaagttccatggacctataagtacgtgtcagactaagttttgctttcccaagttgcgaatttttgatctttctcgtaatgatttcagtggctcatttcctgcaaaagtttttggaaacttcaaggcaatgatcaaattagatggtgaagacgcaggaaatatcatgtacatggaatctatgtcgaattcgcaatttgtcacagcctatgaggattcagtgagtttggtaatcaaagggcaggatattgagctacaaagaatcagcacaattacgacaaccatagatctctcaagcaaccattttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="46720" stop="47672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47005" g_stop="47372" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="368" r_length="368" r_score="0.918"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E465444" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>368</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E465444" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47005" e_stop="47372"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACACGTTTCCAGCGTGGCTCGGAATTCTTCAAGAGCTGCAGGTCCTTATATTAAAGTCAAACAAGTTCCATGGACCTATAAGTACGTGTCATACTGAGTTTTGCTTTACCAAGTTGCGAATTTTTGATCTTTCTCGTAATGATTTCAGTGGCTCACTTCCTGCAAAAGTTTTTGGAAACTTCAAGGCAATGATCAAATTAGATGGTGAAGACATAGGAAATATCAAGTACATGACATCTCTGTTGAATTCGCCATTTGTCACATCGTATGAGAATTCAGTGAGTTTGGTTATCAAAGGGCAGGATTTGTAGCTACAAAGAATCAGCACAATTACGACAACCATAGATCTTTCAAGCAACCATTTTGA</genome_strand>
        <mrna_strand>GACAGGTTTCCATTTTGGCTCGGAACTCTTGAATACCTACAGGTCCTTATATTAAAGTCGAACAAGTTCCATGGACCTATAAGTACGTGTCAGACTAAGTTTTGCTTTCCCAAGTTGCGAATTTTTGATCTTTCTCGTAATGATTTCAGTGGCTCATTTCCTGCAAAAGTTTTTGGAAACTTCAAGGCAATGATCAAATTAGATGGTGAAGACGCAGGAAATATCATGTACATGGAATCTATGTCGAATTCGCAATTTGTCACAGCCTATGAGGATTCAGTGAGTTTGGTAATCAAAGGGCAGGATATTGAGCTACAAAGAATCAGCACAATTACGACAACCATAGATCTCTCAAGCAACCATTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E431910" ref_strand="+" ref_description="SGN-E431910 [STM-56-O7]">
      <seq>gaaacttcaaggcaatgatcaaattagatggcgaagacacaggaaatatcaagtacatggaatctatgttgaatttgctatttgtcacatcgtatgaggattcagtgagtttggtaatcaaagggcaggatattgagctacaaagaatcagcacaattatgacaaccatagatatctcacgcaaccattttgaaggtgtcattccggaaacactaaaggatctcagctcactttggctactcaatttatcccataacaacctcataggtggtattccaatgcaattggggaaattgaataagcttgaagctttagatctctcctggaatcggctcactggaaagattccacaggaattgacacgaatgaactttctggccttcttaaacgtctctcaaaatcatctcgtcggtccaattcctcatggtctacaattcaacacatttgaaaatgactcgtatggtggcaaccttgatttatgtggtcttcctttaacaaagaaatgtggaacgagtgattcatcgcatgttcctcaacaattggagtccgaagaagaaagcgagtcatatttttttagtggatttacgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="46880" stop="48075"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47180" g_stop="47775" g_length="596"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="0.901"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E431910" ref_strand="+">
        <total_alignment_score>0.901</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E431910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47180" e_stop="47775"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTTCAAGGCAATGATCAAATTAGATGGTGAAGACATAGGAAATATCAAGTACATGACATCTCTGTTGAATTCGCCATTTGTCACATCGTATGAGAATTCAGTGAGTTTGGTTATCAAAGGGCAGGATTTGTAGCTACAAAGAATCAGCACAATTACGACAACCATAGATCTTTCAAGCAACCATTTTGAAGGTGTCATTCCGGAAACACTAAAAGATCTCAGCTCGCTTTGGCTACTCAATTTATCTCATAACAATCTTATAGGTCATATTCCAATGGAATTGGGGCAATTGATTACACTTGAAGCTTTAGATCTCTCCTGGAATCGGCTCACTGGAAAGATTCCGCAGGAATTGACAAGAATGAACTTTCTGTCCGTATTAAACCTCTCTCAAAATCATCTCATTGGACCAATTCCTCAAGGTCTACAGTTCAACACATTTGGAAATGACTCGTACGGCGGCAACCTTGATTTATGTGGTCCTCCTTTATCAAAACAATGTGGAACGAGTGATCCATCGCATGCTCCTCAACCATTGGAGGAAGAAGAAAAAGATGAAAGTGAGTCATATTTTTTTAGTGGATTTACGTGG</genome_strand>
        <mrna_strand>GAAACTTCAAGGCAATGATCAAATTAGATGGCGAAGACACAGGAAATATCAAGTACATGGAATCTATGTTGAATTTGCTATTTGTCACATCGTATGAGGATTCAGTGAGTTTGGTAATCAAAGGGCAGGATATTGAGCTACAAAGAATCAGCACAATTATGACAACCATAGATATCTCACGCAACCATTTTGAAGGTGTCATTCCGGAAACACTAAAGGATCTCAGCTCACTTTGGCTACTCAATTTATCCCATAACAACCTCATAGGTGGTATTCCAATGCAATTGGGGAAATTGAATAAGCTTGAAGCTTTAGATCTCTCCTGGAATCGGCTCACTGGAAAGATTCCACAGGAATTGACACGAATGAACTTTCTGGCCTTCTTAAACGTCTCTCAAAATCATCTCGTCGGTCCAATTCCTCATGGTCTACAATTCAACACATTTGAAAATGACTCGTATGGTGGCAACCTTGATTTATGTGGTCTTCCTTTAACAAAGAAATGTGGAACGAGTGATTCATCGCATGTTCCTCAACAATTGGAGTCCGAAG----A-A-GAAAGCGAGTCATATTTTTTTAGTGGATTTACGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E400577" ref_strand="+" ref_description="SGN-E400577 [PPC-1-D1]">
      <seq>gaaacttcaaggcaatgatcaaattagatggcgaagacacaggaaatatcaagtacatggaatctatgttgaatttgctatttgtcacatcgtatgaggattcagtgagtttggtaatcaaagggcaggatattgagctacaaagaatcagcacaattatgacaaccatagatatctcacgcaaccattttgaaggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="+" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="46880" stop="47677"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="47180" g_stop="47377" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="+" ref_id="SGN-E400577" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>198</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E400577" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="47180" e_stop="47377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTTCAAGGCAATGATCAAATTAGATGGTGAAGACATAGGAAATATCAAGTACATGACATCTCTGTTGAATTCGCCATTTGTCACATCGTATGAGAATTCAGTGAGTTTGGTTATCAAAGGGCAGGATTTGTAGCTACAAAGAATCAGCACAATTACGACAACCATAGATCTTTCAAGCAACCATTTTGAAGGTG</genome_strand>
        <mrna_strand>GAAACTTCAAGGCAATGATCAAATTAGATGGCGAAGACACAGGAAATATCAAGTACATGGAATCTATGTTGAATTTGCTATTTGTCACATCGTATGAGGATTCAGTGAGTTTGGTAATCAAAGGGCAGGATATTGAGCTACAAAGAATCAGCACAATTATGACAACCATAGATATCTCACGCAACCATTTTGAAGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E623131" ref_strand="+" ref_description="SGN-E623131 [88220]">
      <seq>cttcttcccaatcccattgaacttcaaccatcacaaagcaaaataaaagatgttgacactattaaccattcttttcttagcaattctcttcattattggccttatcacaacaattttcaatttcccaactaacaagttccactttttgattcaatcaatctcactaaaatctcaacctctccaagagaagaccataataacaccctcatcatcatcagcaacaacatccatggctgatcaaaagaaggtaaaaagctttaacaattacaacaaggttgaactaaggggtattttttcaacttttgacaagaacaatgatggttacataacaaagcaagaattgaagctatctctcaagaatattgggatttttatggaggataaagatattgttgatatggttgagaaagttgattcaaacaaagatggtttaattgatcttgatgagttttatgaactttgtcatactttcttgggaatagagggagtggaacaagaaggtgaaatgaatgaagaagaagtggctaatagagagcaaggtcttaaggaagcttttgatgtgtttgatcatgataaagatggattaatatcagaagaagaattgagtaagattctttcatctttaggaatgaaagagggtaagaaattggataattgtaaagaaatgataaagaaagttgatgtggatggagatggaatggtgaattttgatgagttcaagaagatgatgaaagcttgtggaactcttgttccatttttcataagcaaccatataccaattgaagaaaatagcctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54976" stop="53632"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54676" g_stop="53875" g_length="802"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="798" r_length="798" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E623131" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E623131" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54676" e_stop="53875"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTTCCTATTCCCATTGAACTTCAACCATCACAAAGCAAAACAAAAGATGTTGACACTATTAACCATTCTTTTCTTAGCATTTCTCTTCATTATTGGCCTTATCACAACAATTTTCAATTTCCCAACTAACAAGTTCCACTCTTTAATTCAATCAATCTCACTAGAATCTCAACCTCTCCAAGAAAGGACCATAACAACACCCCCATCATCATCATCAACAACAACATCCATGGTTGATCAAAAGAAGGCAAAAAGCTTTAACAATTACAACAAAGTTGAACTAAGGGGTATATTTGCAACTTTTGACAAGAACAATGATGGTTACATAACAAAGCAAGAATTGAAGCTATCTCTAAAGAATATTGGGATATTAATGGAGGATAAAGATATTGTTGATATGGTTGAGAAAGTTGATACAAACAAAGATGGTTTAATTGATCTTGATGAGTTTTGTGAACTTTGTCATACTTTCTTGGGAATAGATGGAGTGGAACAAGAAGGTGAAATGAATGAAGAAGAAGTTGCTAATAAAGAGAGAGATCTTAAAGAAGCTTTTGATGTGTTTGATCATGATAAAGATGGATTAATATCAGAAGAAGAATTGAGTAAGATACTTTCATCTTTAGGAATGAAAGAAGGTAAGAAATTGGATCATTGTAAAGAAATGATAAAGAAAGTTGATGTTGATGGTGATGGAATGGTGAACTTTGATGAGTTCAAGAAGATGATGAAAGCTTGAGTATTCTATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</genome_strand>
        <mrna_strand>CTTCTTCCCAATCCCATTGAACTTCAACCATCACAAAGCAAAATAAAAGATGTTGACACTATTAACCATTCTTTTCTTAGCAATTCTCTTCATTATTGGCCTTATCACAACAATTTTCAATTTCCCAACTAACAAGTTCCACTTTTTGATTCAATCAATCTCACTAAAATCTCAACCTCTCCAAGAGAAGACCATAATAACA--CCC-TCATCATCATCAGCAACAACATCCATGGCTGATCAAAAGAAGGTAAAAAGCTTTAACAATTACAACAAGGTTGAACTAAGGGGTATTTTTTCAACTTTTGACAAGAACAATGATGGTTACATAACAAAGCAAGAATTGAAGCTATCTCTCAAGAATATTGGGATTTTTATGGAGGATAAAGATATTGTTGATATGGTTGAGAAAGTTGATTCAAACAAAGATGGTTTAATTGATCTTGATGAGTTTTATGAACTTTGTCATACTTTCTTGGGAATAGAGGGAGTGGAACAAGAAGGTGAAATGAATGAAGAAGAAGTGGCTAATAGAGAGCAAGGTCTTAAGGAAGCTTTTGATGTGTTTGATCATGATAAAGATGGATTAATATCAGAAGAAGAATTGAGTAAGATTCTTTCATCTTTAGGAATGAAAGAGGGTAAGAAATTGGATAATTGTAAAGAAATGATAAAGAAAGTTGATGTGGATGGAGATGGAATGGTGAATTTTGATGAGTTCAAGAAGATGATGAAAGCTTGTGGA-ACTCTTGTTCCATTTTTCATAAGCAACCATATACCAATTGAAGAAAATAGCCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-QQ7dXf/sgn_ests_tomato_potato" ref_id="SGN-E267354" ref_strand="+" ref_description="SGN-E267354 [cLEI-17-K13]">
      <seq>ttgacactattaaccattcttttcttagcatttctcttcattattggccttatcacaacaattttcaatttcccaactaacaagttccactctttaattcaatcaatctcactagaatctcaacctctccaagaaaggaccataacaacacccccatcatcatcatcaacaacaacatccatggttgatcaaaagaaggcaaaaagctttaacaattacaacaaagttgaactaaggggtatatttgcaacttttgacaagaacaatgatggttacataacaaagcaagaattgaagctatctctaaagaatattgggatattaatggaggataaagatattgttgatatggttgagaaagttgatacaaacaaagatggtttaattgatcttgatgagttttgtgaactttgtcatactttcttgggaatagatggagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0211M21-cjaUT/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0211M21.1" temp_strand="-" temp_description="C12HBa0211M21.1  AC217247.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0211M21 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54924" stop="53885"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54624" g_stop="54185" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="440" r_length="440" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0211M21.1" gen_strand="-" ref_id="SGN-E267354" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0211M21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E267354" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54624" e_stop="54185"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGACACTATTAACCATTCTTTTCTTAGCATTTCTCTTCATTATTGGCCTTATCACAACAATTTTCAATTTCCCAACTAACAAGTTCCACTCTTTAATTCAATCAATCTCACTAGAATCTCAACCTCTCCAAGAAAGGACCATAACAACACCCCCATCATCATCATCAACAACAACATCCATGGTTGATCAAAAGAAGGCAAAAAGCTTTAACAATTACAACAAAGTTGAACTAAGGGGTATATTTGCAACTTTTGACAAGAACAATGATGGTTACATAACAAAGCAAGAATTGAAGCTATCTCTAAAGAATATTGGGATATTAATGGAGGATAAAGATATTGTTGATATGGTTGAGAAAGTTGATACAAACAAAGATGGTTTAATTGATCTTGATGAGTTTTGTGAACTTTGTCATACTTTCTTGGGAATAGATGGAGT</genome_strand>
        <mrna_strand>TTGACACTATTAACCATTCTTTTCTTAGCATTTCTCTTCATTATTGGCCTTATCACAACAATTTTCAATTTCCCAACTAACAAGTTCCACTCTTTAATTCAATCAATCTCACTAGAATCTCAACCTCTCCAAGAAAGGACCATAACAACACCCCCATCATCATCATCAACAACAACATCCATGGTTGATCAAAAGAAGGCAAAAAGCTTTAACAATTACAACAAAGTTGAACTAAGGGGTATATTTGCAACTTTTGACAAGAACAATGATGGTTACATAACAAAGCAAGAATTGAAGCTATCTCTAAAGAATATTGGGATATTAATGGAGGATAAAGATATTGTTGATATGGTTGAGAAAGTTGATACAAACAAAGATGGTTTAATTGATCTTGATGAGTTTTGTGAACTTTGTCATACTTTCTTGGGAATAGATGGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>113</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="1" PGL_stop="1790"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="1" e_stop="237"/>
            <exon e_start="535" e_stop="627"/>
            <exon e_start="1415" e_stop="1790"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.963"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="1" e_stop="237" e_length="237"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.996">
            <gDNA_intron_boundary i_start="238" i_stop="534" i_length="297"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="535" e_stop="627" e_length="93"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="1.000">
            <gDNA_intron_boundary i_start="628" i_stop="1414" i_length="787"/>
          </intron>
          <exon e_serial="3" e_score="0.963">
            <gDNA_exon_boundary e_start="1415" e_stop="1790" e_length="376"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1" stop="237"/>
              <exon start="535" stop="627"/>
              <exon start="1415" stop="1790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318169" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1" stop="237"/>
              <exon start="535" stop="627"/>
              <exon start="1415" stop="1719"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318207" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="1" stop="237"/>
              <exon start="535" stop="627"/>
              <exon start="1415" stop="1646"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E318072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAATTTCATATTAATTCAGATCAAGAAAAAGATTATCGGAATATATCGAAGATGAAGAATAAGAAGAATATTGAAAGAAATAAAAGGGAAAAATACCCTTTAATTTCTTATCAAGAATTACCAGAATATATGAAGGATAATGAGTTTATTTTGAATTATTATAGAGCTAATTGGCCTCTCAAACAAGCATTTTTCAGTATTTTCAGTTGGCATAATGAAACTCTTAATGTTTGGAC : GCATTTAATTGGATTTATTCTATTTGTGGTATTAACCATAGCTAATGCAGAGCATTTATCTCAAATTGCTGATTTTATGACTATGTTTATCCG : GAATTTTCCAACAAGTGGAGATGCGAATATATCTCACAATTTTAAGGTACTTTTAAGTATTGTTAGTAGTAACTTAATGAACTTATAAGTTATTTAATATATCGATACAATTCAGTCGCTTAAAAGATAATTACAGGTCTAATATACTCAATAACTAAAATTAGTTACTTAATATAAAATAAGTAAGAAGTAGACCCTTCGGGGTGGTCTAGTGGTTTGAGCTTGGGACTTCCATGTTGGAGGTTTAAGTTCAAAACCCCTTGCCAGCGAAAGCAAAAATTTACCTCTCCTGCGGATTTCCCTTGTCATAAAAAAAAGAGAGTAAGAAATAACTTATTCATACTGATCGAGTTACTAAACTGAAAAATAAAATAAA</gDNA_template>
            <first_frame> L  I  S  Y  *  F  R  S  R  K  R  L  S  E  Y  I  E  D  E  E  *  E  E  Y  *  K  K  *  K  G  K  I  P  F  N  F  L  S  R  I  T  R  I  Y  E  G  *  *  V  Y  F  E  L  L  *  S  *  L  A  S  Q  T  S  I  F  Q  Y  F  Q  L  A  *  *  N  S  *  C  L  D  :  A  F  N  W  I  Y  S  I  C  G  I  N  H  S  *  C  R  A  F  I  S  N  C  *  F  Y  D  Y  V  Y  P  :  E  F  S  N  K  W  R  C  E  Y  I  S  Q  F  *  G  T  F  K  Y  C  *  *  *  L  N  E  L  I  S  Y  L  I  Y  R  Y  N  S  V  A  *  K  I  I  T  G  L  I  Y  S  I  T  K  I  S  Y  L  I  *  N  K  *  E  V  D  P  S  G  W  S  S  G  L  S  L  G  L  P  C  W  R  F  K  F  K  T  P  C  Q  R  K  Q  K  F  T  S  P  A  D  F  P  C  H  K  K  K  R  V  R  N  N  L  F  I  L  I  E  L  L  N  *  K  I  K  *  </first_frame>
            <second_frame>  *  F  H  I  N  S  D  Q  E  K  D  Y  R  N  I  S  K  M  K  N  K  K  N  I  E  R  N  K  R  E  K  Y  P  L  I  S  Y  Q  E  L  P  E  Y  M  K  D  N  E  F  I  L  N  Y  Y  R  A  N  W  P  L  K  Q  A  F  F  S  I  F  S  W  H  N  E  T  L  N  V  W  T :   H  L  I  G  F  I  L  F  V  V  L  T  I  A  N  A  E  H  L  S  Q  I  A  D  F  M  T  M  F  I  R :   N  F  P  T  S  G  D  A  N  I  S  H  N  F  K  V  L  L  S  I  V  S  S  N  L  M  N  L  *  V  I  *  Y  I  D  T  I  Q  S  L  K  R  *  L  Q  V  *  Y  T  Q  *  L  K  L  V  T  *  Y  K  I  S  K  K  *  T  L  R  G  G  L  V  V  *  A  W  D  F  H  V  G  G  L  S  S  K  P  L  A  S  E  S  K  N  L  P  L  L  R  I  S  L  V  I  K  K  R  E  *  E  I  T  Y  S  Y  *  S  S  Y  *  T  E  K  *  N  K </second_frame>
            <third_frame>   N  F  I  L  I  Q  I  K  K  K  I  I  G  I  Y  R  R  *  R  I  R  R  I  L  K  E  I  K  G  K  N  T  L  *  F  L  I  K  N  Y  Q  N  I  *  R  I  M  S  L  F  *  I  I  I  E  L  I  G  L  S  N  K  H  F  S  V  F  S  V  G  I  M  K  L  L  M  F  G   : R  I  *  L  D  L  F  Y  L  W  Y  *  P  *  L  M  Q  S  I  Y  L  K  L  L  I  L  *  L  C  L  S   : G  I  F  Q  Q  V  E  M  R  I  Y  L  T  I  L  R  Y  F  *  V  L  L  V  V  T  *  *  T  Y  K  L  F  N  I  S  I  Q  F  S  R  L  K  D  N  Y  R  S  N  I  L  N  N  *  N  *  L  L  N  I  K  *  V  R  S  R  P  F  G  V  V  *  W  F  E  L  G  T  S  M  L  E  V  *  V  Q  N  P  L  P  A  K  A  K  I  Y  L  S  C  G  F  P  L  S  *  K  K  E  S  K  K  *  L  I  H  T  D  R  V  T  K  L  K  N  K  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5" stop="237"/>
                    <exon start="535" stop="627"/>
                    <exon start="1415" stop="1502"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>411</number_coding_nucleotides>
                  <number_encoded_amino_acids>137</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FHINSDQEKDYRNISKMKNKKNIERNKREKYPLISYQELPEYMKDNEFILNYYRANWPLKQAFFSIFSWHNETLNVWTHLIGFILFVVLTIANAEHLSQIADFMTMFIRNFPTSGDANISHNFKVLLSIVSSNLMNL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="15439" PGL_stop="19366"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="15439" e_stop="16281"/>
            <exon e_start="16873" e_stop="17178"/>
            <exon e_start="17795" e_stop="17831"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="0.999"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.997"/>
          <exon-only e_score="0.762"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="15439" e_stop="16281" e_length="843"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="16873" e_stop="17178" e_length="306"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17179" i_stop="17794" i_length="616"/>
          </intron>
          <exon e_serial="3" e_score="0.762">
            <gDNA_exon_boundary e_start="17795" e_stop="17831" e_length="37"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15439" stop="15960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15478" stop="16240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724495" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15492" stop="16005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290301" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15494" stop="16217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15495" stop="15910"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15496" stop="16041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15497" stop="16246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332884" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15497" stop="16214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344463" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15497" stop="16053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15499" stop="16068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15500" stop="15940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15502" stop="15911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15503" stop="16281"/>
              <exon start="16873" stop="16955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="16233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="16226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15508" stop="16214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15509" stop="15887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15511" stop="16210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285278" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15513" stop="16232"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15513" stop="15917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284057" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15520" stop="16053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15523" stop="16208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15527" stop="16092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15589" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15589" stop="15769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15615" stop="16233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15615" stop="16217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15621" stop="16181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15621" stop="15945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15633" stop="16094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15658" stop="16094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15672" stop="16281"/>
              <exon start="16873" stop="17070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15738" stop="16281"/>
              <exon start="16873" stop="16938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15738" stop="16211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15781" stop="16281"/>
              <exon start="16873" stop="16886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15800" stop="16281"/>
              <exon start="16873" stop="17060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15836" stop="16281"/>
              <exon start="16873" stop="17040"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15866" stop="16238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15883" stop="16281"/>
              <exon start="16873" stop="17068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278879" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15891" stop="16281"/>
              <exon start="16873" stop="16961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323211" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15908" stop="16281"/>
              <exon start="16873" stop="16902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15909" stop="16281"/>
              <exon start="16873" stop="16906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15918" stop="16281"/>
              <exon start="16873" stop="17125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15918" stop="16281"/>
              <exon start="16873" stop="17113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293072" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15944" stop="16281"/>
              <exon start="16873" stop="16945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15997" stop="16281"/>
              <exon start="16873" stop="16984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16119" stop="16281"/>
              <exon start="16873" stop="17054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16119" stop="16281"/>
              <exon start="16873" stop="17054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16131" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225419" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16173" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218176" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16180" stop="16281"/>
              <exon start="16873" stop="17044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232348" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16181" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238764" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16192" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226545" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16223" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238995" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16231" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226409" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16242" stop="16281"/>
              <exon start="16873" stop="17178"/>
              <exon start="17795" stop="17831"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538689" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16250" stop="16281"/>
              <exon start="16873" stop="17178"/>
              <exon start="17795" stop="17815"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279633" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTCTATCTATATAACACCACAATCTTTGTACCAAATTATTTAACCACAAAAAATGGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG : GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAACAAGTATTTTTTTCAATGTTTTAGTGGTCTTATTTGAAAATTTTAATTTTGTTTAATTTTAAAA : AAAAAAAAAGATAAATTGGACCATAACATTTTGAAGA</gDNA_template>
            <first_frame> F  S  I  Y  I  T  P  Q  S  L  Y  Q  I  I  *  P  Q  K  M  E  F  S  K  I  T  S  L  L  F  I  S  M  L  F  L  S  S  F  T  P  I  L  G  C  G  Y  C  G  K  P  S  H  K  P  K  K  P  K  V  P  T  P  I  V  K  P  P  V  D  L  P  P  I  G  I  P  P  I  V  K  P  P  V  N  L  P  P  I  G  I  P  P  I  V  K  P  P  V  K  L  P  P  I  G  I  P  P  I  V  K  P  P  V  I  L  P  P  V  G  I  P  P  I  V  K  P  P  V  K  L  P  P  V  G  I  P  P  I  V  K  P  P  V  D  L  P  P  V  G  I  P  P  V  T  V  P  P  I  V  K  P  P  V  D  L  P  P  I  G  I  P  P  V  T  V  P  P  V  I  K  P  S  P  K  G  K  K  P  C  P  P  T  T  K  A  T  C  P  I  D  T  L  K  L  G  A  C  V  D  L  L  G  G  L  V  H  I  G  L  G  D  P  A  V  N  E  C  C  P  I  L  S  G  L  V  E  L  E  A  A  A  C  L  C  T  T  L  K  V  K  L  L  N  L  K  I  Y  V  P  L  A  L  Q  L  L  V  T  C  G  K  S  P  P  P  G  Y  T  C  S  I  *  :  V  S  N  L  K  F  E  E  I  A  W  I  A  M  K  G  C  P  I  Y  D  L  F  N  F  S  P  P  H  P  T  P  Q  N  C  I  L  C  I  V  L  F  W  L  C  G  I  V  I  *  W  N  Y  Y  Y  Y  Y  H  Y  Y  Y  Y  Y  Y  F  S  V  S  F  E  C  H  V  S  M  N  W  E  K  K  N  K  Y  F  F  Q  C  F  S  G  L  I  *  K  F  *  F  C  L  I  L  K  :  K  K  K  D  K  L  D  H  N  I  L  K  </first_frame>
            <second_frame>  F  L  S  I  *  H  H  N  L  C  T  K  L  F  N  H  K  K  W  S  S  L  R  *  L  H  F  F  S  F  L  C  F  S  F  L  H  S  L  P  F  L  D  V  A  I  V  V  N  L  L  T  S  P  K  S  P  K  F  P  L  P  L  S  N  P  L  S  I  C  P  L  S  E  F  H  Q  S  *  N  H  L  L  I  C  P  L  S  E  F  H  R  S  *  N  H  Q  S  N  C  H  L  S  E  F  H  Q  S  *  N  R  P  S  Y  C  H  L  S  E  F  H  Q  S  *  N  H  L  S  N  C  H  L  S  E  F  H  Q  S  *  N  H  L  L  I  C  H  L  L  G  F  H  R  S  Q  F  H  Q  L  *  N  L  Q  L  I  C  H  L  L  E  F  H  Q  S  Q  F  H  Q  *  L  N  H  H  L  K  G  K  N  L  V  H  Q  Q  Q  R  Q  H  A  Q  L  T  H  *  N  L  G  L  V  W  I  F  *  V  G  L  F  I  L  A  L  V  I  Q  L  L  M  N  V  V  Q  Y  L  V  G  L  L  N  L  K  L  L  L  A  F  A  Q  H  L  K  S  N  Y  L  T  S  K  S  M  Y  L  *  H  F  N  S  L  L  L  V  E  R  V  H  H  L  A  T  L  V  P  S  R :   F  P  I  *  N  L  K  K  L  H  G  L  P  *  K  D  V  Q  F  M  I  Y  L  I  S  L  H  P  T  P  P  L  K  I  V  F  Y  V  L  F  Y  F  G  F  V  E  L  L  F  N  G  I  I  I  I  I  I  I  I  T  I  I  I  I  S  V  Y  R  L  N  V  M  F  Q  *  I  G  K  K  K  T  S  I  F  F  N  V  L  V  V  L  F  E  N  F  N  F  V  *  F  *  K :   K  K  K  I  N  W  T  I  T  F  *  R </second_frame>
            <third_frame>   F  Y  L  Y  N  T  T  I  F  V  P  N  Y  L  T  T  K  N  G  V  L  *  D  N  F  T  S  F  H  F  Y  A  F  P  F  F  I  H  S  H  S  W  M  W  L  L  W  *  T  F  S  Q  A  Q  K  A  Q  S  S  H  S  H  C  Q  T  P  C  R  F  A  P  Y  R  N  S  T  N  R  E  T  T  C  *  F  A  P  Y  R  N  S  T  D  R  K  T  T  S  Q  I  A  T  Y  R  N  S  T  N  R  K  T  A  R  H  I  A  T  C  R  N  S  T  N  R  K  T  T  C  Q  I  A  T  C  R  N  S  T  N  R  K  T  T  C  *  F  A  T  C  W  D  S  T  G  H  S  S  T  N  C  K  T  S  S  *  F  A  T  Y  W  N  S  T  S  H  S  S  T  S  N  *  T  I  T  *  R  E  K  T  L  S  T  N  N  K  G  N  M  P  N  *  H  I  E  T  W  G  L  C  G  S  F  R  W  A  C  S  Y  W  P  W  *  S  S  C  *  *  M  L  S  N  T  *  W  A  C  *  T  *  S  C  C  L  P  L  H  N  T  *  S  Q  I  T  *  P  Q  N  L  C  T  S  S  T  S  T  P  C  Y  L  W  K  E  S  T  T  W  L  H  L  F  H  L   : G  F  Q  S  E  I  *  R  N  C  M  D  C  H  E  R  M  S  N  L  *  F  I  *  F  L  S  T  P  P  H  P  S  K  L  Y  F  M  Y  C  F  I  L  A  L  W  N  C  Y  L  M  E  L  L  L  L  L  S  L  L  L  L  L  L  F  Q  C  I  V  *  M  S  C  F  N  E  L  G  K  K  K  Q  V  F  F  S  M  F  *  W  S  Y  L  K  I  L  I  L  F  N  F  K   : K  K  K  R  *  I  G  P  *  H  F  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15484" stop="16281"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>795</number_coding_nucleotides>
                  <number_encoded_amino_acids>265</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PQKMEFSKITSLLFISMLFLSSFTPILGCGYCGKPSHKPKKPKVPTPIVKPPVDLPPIGIPPIVKPPVNLPPIGIPPIVKPPVKLPPIGIPPIVKPPVILPPVGIPPIVKPPVKLPPVGIPPIVKPPVDLPPVGIPPVTVPPIVKPPVDLPPIGIPPVTVPPVIKPSPKGKKPCPPTTKATCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPILSGLVELEAAACLCTTLKVKLLNLKIYVPLALQLLVTCGKSPPPGYTCSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15439" e_stop="16281"/>
            <exon e_start="16873" e_stop="17131"/>
            <exon e_start="18606" e_stop="18631"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="0.999"/>
          <exon-intron don_prob="0.000" acc_prob="0.517" e_score="1.000"/>
          <exon-only e_score="0.615"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="15439" e_stop="16281" e_length="843"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="16282" i_stop="16872" i_length="591"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="16873" e_stop="17131" e_length="259"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.517">
            <gDNA_intron_boundary i_start="17132" i_stop="18605" i_length="1474"/>
          </intron>
          <exon e_serial="3" e_score="0.615">
            <gDNA_exon_boundary e_start="18606" e_stop="18631" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15439" stop="15960"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267142" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15478" stop="16240"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E724495" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15492" stop="16005"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290301" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15494" stop="16217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343062" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15495" stop="15910"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295014" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15496" stop="16041"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725787" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15497" stop="16246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332884" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15497" stop="16214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344463" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15497" stop="16053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333160" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15499" stop="16068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265477" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15500" stop="15940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279075" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15502" stop="15911"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E311950" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15503" stop="16281"/>
              <exon start="16873" stop="16955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732699" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="16233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327876" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15504" stop="16226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327875" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15508" stop="16214"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15509" stop="15887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277846" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15511" stop="16210"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E285278" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15513" stop="16232"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15513" stop="15917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284057" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15520" stop="16053"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15523" stop="16208"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E269120" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15527" stop="16092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290507" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15589" stop="16069"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295096" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15589" stop="15769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15615" stop="16233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297915" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15615" stop="16217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296460" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15621" stop="16181"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15621" stop="15945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E277275" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15633" stop="16094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E732772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15658" stop="16094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15672" stop="16281"/>
              <exon start="16873" stop="17070"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15738" stop="16281"/>
              <exon start="16873" stop="16938"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E347830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15738" stop="16211"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15781" stop="16281"/>
              <exon start="16873" stop="16886"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291143" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15800" stop="16281"/>
              <exon start="16873" stop="17060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737860" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15836" stop="16281"/>
              <exon start="16873" stop="17040"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737722" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15866" stop="16238"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344006" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15883" stop="16281"/>
              <exon start="16873" stop="17068"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278879" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15891" stop="16281"/>
              <exon start="16873" stop="16961"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E323211" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15908" stop="16281"/>
              <exon start="16873" stop="16902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15909" stop="16281"/>
              <exon start="16873" stop="16906"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15918" stop="16281"/>
              <exon start="16873" stop="17125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300603" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15918" stop="16281"/>
              <exon start="16873" stop="17113"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293072" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15944" stop="16281"/>
              <exon start="16873" stop="16945"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E292771" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15997" stop="16281"/>
              <exon start="16873" stop="16984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E287492" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16119" stop="16281"/>
              <exon start="16873" stop="17054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16119" stop="16281"/>
              <exon start="16873" stop="17054"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294599" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16131" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225419" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16173" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218176" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16180" stop="16281"/>
              <exon start="16873" stop="17044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E232348" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16181" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238764" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16192" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226545" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16223" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238995" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16224" stop="16281"/>
              <exon start="16873" stop="17131"/>
              <exon start="18606" stop="18631"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E225273" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16231" stop="16281"/>
              <exon start="16873" stop="17129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E226409" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTCTATCTATATAACACCACAATCTTTGTACCAAATTATTTAACCACAAAAAATGGAGTTCTCTAAGATAACTTCACTTCTTTTCATTTCTATGCTTTTCCTTTCTTCATTCACTCCCATTCTTGGATGTGGCTATTGTGGTAAACCTTCTCACAAGCCCAAAAAGCCCAAAGTTCCCACTCCCATTGTCAAACCCCCTGTCGATTTGCCCCCTATCGGAATTCCACCAATCGTGAAACCACCTGTTAATTTGCCCCCTATCGGAATTCCACCGATCGTAAAACCACCAGTCAAATTGCCACCTATCGGAATTCCACCAATCGTAAAACCGCCCGTCATATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTCAAATTGCCACCTGTCGGAATTCCACCAATCGTAAAACCACCTGTTGATTTGCCACCTGTTGGGATTCCACCGGTCACAGTTCCACCAATTGTAAAACCTCCAGTTGATTTGCCACCTATTGGAATTCCACCAGTCACAGTTCCACCAGTAATTAAACCATCACCTAAAGGGAAAAAACCTTGTCCACCAACAACAAAGGCAACATGCCCAATTGACACATTGAAACTTGGGGCTTGTGTGGATCTTTTAGGTGGGCTTGTTCATATTGGCCTTGGTGATCCAGCTGTTAATGAATGTTGTCCAATACTTAGTGGGCTTGTTGAACTTGAAGCTGCTGCTTGCCTTTGCACAACACTTAAAGTCAAATTACTTAACCTCAAAATCTATGTACCTCTAGCACTTCAACTCCTTGTTACTTGTGGAAAGAGTCCACCACCTGGCTACACTTGTTCCATCTAG : GTTTCCAATCTGAAATTTGAAGAAATTGCATGGATTGCCATGAAAGGATGTCCAATTTATGATTTATTTAATTTCTCTCCACCCCACCCCACCCCTCAAAATTGTATTTTATGTATTGTTTTATTTTGGCTTTGTGGAATTGTTATTTAATGGAATTATTATTATTATTATCATTATTACTATTATTATTATTTCAGTGTATCGTTTGAATGTCATGTTTCAATGAATTGGGAAAAAAAAAACAAGTATTTTTTTCAAT : ACATCAACGAAAAAAGACATCGAAAA</gDNA_template>
            <first_frame> F  S  I  Y  I  T  P  Q  S  L  Y  Q  I  I  *  P  Q  K  M  E  F  S  K  I  T  S  L  L  F  I  S  M  L  F  L  S  S  F  T  P  I  L  G  C  G  Y  C  G  K  P  S  H  K  P  K  K  P  K  V  P  T  P  I  V  K  P  P  V  D  L  P  P  I  G  I  P  P  I  V  K  P  P  V  N  L  P  P  I  G  I  P  P  I  V  K  P  P  V  K  L  P  P  I  G  I  P  P  I  V  K  P  P  V  I  L  P  P  V  G  I  P  P  I  V  K  P  P  V  K  L  P  P  V  G  I  P  P  I  V  K  P  P  V  D  L  P  P  V  G  I  P  P  V  T  V  P  P  I  V  K  P  P  V  D  L  P  P  I  G  I  P  P  V  T  V  P  P  V  I  K  P  S  P  K  G  K  K  P  C  P  P  T  T  K  A  T  C  P  I  D  T  L  K  L  G  A  C  V  D  L  L  G  G  L  V  H  I  G  L  G  D  P  A  V  N  E  C  C  P  I  L  S  G  L  V  E  L  E  A  A  A  C  L  C  T  T  L  K  V  K  L  L  N  L  K  I  Y  V  P  L  A  L  Q  L  L  V  T  C  G  K  S  P  P  P  G  Y  T  C  S  I  *  :  V  S  N  L  K  F  E  E  I  A  W  I  A  M  K  G  C  P  I  Y  D  L  F  N  F  S  P  P  H  P  T  P  Q  N  C  I  L  C  I  V  L  F  W  L  C  G  I  V  I  *  W  N  Y  Y  Y  Y  Y  H  Y  Y  Y  Y  Y  Y  F  S  V  S  F  E  C  H  V  S  M  N  W  E  K  K  N  K  Y  F  F  Q   : Y  I  N  E  K  R  H  R  K </first_frame>
            <second_frame>  F  L  S  I  *  H  H  N  L  C  T  K  L  F  N  H  K  K  W  S  S  L  R  *  L  H  F  F  S  F  L  C  F  S  F  L  H  S  L  P  F  L  D  V  A  I  V  V  N  L  L  T  S  P  K  S  P  K  F  P  L  P  L  S  N  P  L  S  I  C  P  L  S  E  F  H  Q  S  *  N  H  L  L  I  C  P  L  S  E  F  H  R  S  *  N  H  Q  S  N  C  H  L  S  E  F  H  Q  S  *  N  R  P  S  Y  C  H  L  S  E  F  H  Q  S  *  N  H  L  S  N  C  H  L  S  E  F  H  Q  S  *  N  H  L  L  I  C  H  L  L  G  F  H  R  S  Q  F  H  Q  L  *  N  L  Q  L  I  C  H  L  L  E  F  H  Q  S  Q  F  H  Q  *  L  N  H  H  L  K  G  K  N  L  V  H  Q  Q  Q  R  Q  H  A  Q  L  T  H  *  N  L  G  L  V  W  I  F  *  V  G  L  F  I  L  A  L  V  I  Q  L  L  M  N  V  V  Q  Y  L  V  G  L  L  N  L  K  L  L  L  A  F  A  Q  H  L  K  S  N  Y  L  T  S  K  S  M  Y  L  *  H  F  N  S  L  L  L  V  E  R  V  H  H  L  A  T  L  V  P  S  R :   F  P  I  *  N  L  K  K  L  H  G  L  P  *  K  D  V  Q  F  M  I  Y  L  I  S  L  H  P  T  P  P  L  K  I  V  F  Y  V  L  F  Y  F  G  F  V  E  L  L  F  N  G  I  I  I  I  I  I  I  I  T  I  I  I  I  S  V  Y  R  L  N  V  M  F  Q  *  I  G  K  K  K  T  S  I  F  F  N  :  T  S  T  K  K  D  I  E   </second_frame>
            <third_frame>   F  Y  L  Y  N  T  T  I  F  V  P  N  Y  L  T  T  K  N  G  V  L  *  D  N  F  T  S  F  H  F  Y  A  F  P  F  F  I  H  S  H  S  W  M  W  L  L  W  *  T  F  S  Q  A  Q  K  A  Q  S  S  H  S  H  C  Q  T  P  C  R  F  A  P  Y  R  N  S  T  N  R  E  T  T  C  *  F  A  P  Y  R  N  S  T  D  R  K  T  T  S  Q  I  A  T  Y  R  N  S  T  N  R  K  T  A  R  H  I  A  T  C  R  N  S  T  N  R  K  T  T  C  Q  I  A  T  C  R  N  S  T  N  R  K  T  T  C  *  F  A  T  C  W  D  S  T  G  H  S  S  T  N  C  K  T  S  S  *  F  A  T  Y  W  N  S  T  S  H  S  S  T  S  N  *  T  I  T  *  R  E  K  T  L  S  T  N  N  K  G  N  M  P  N  *  H  I  E  T  W  G  L  C  G  S  F  R  W  A  C  S  Y  W  P  W  *  S  S  C  *  *  M  L  S  N  T  *  W  A  C  *  T  *  S  C  C  L  P  L  H  N  T  *  S  Q  I  T  *  P  Q  N  L  C  T  S  S  T  S  T  P  C  Y  L  W  K  E  S  T  T  W  L  H  L  F  H  L   : G  F  Q  S  E  I  *  R  N  C  M  D  C  H  E  R  M  S  N  L  *  F  I  *  F  L  S  T  P  P  H  P  S  K  L  Y  F  M  Y  C  F  I  L  A  L  W  N  C  Y  L  M  E  L  L  L  L  L  S  L  L  L  L  L  L  F  Q  C  I  V  *  M  S  C  F  N  E  L  G  K  K  K  Q  V  F  F  S  I :   H  Q  R  K  K  T  S  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15484" stop="16281"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>795</number_coding_nucleotides>
                  <number_encoded_amino_acids>265</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PQKMEFSKITSLLFISMLFLSSFTPILGCGYCGKPSHKPKKPKVPTPIVKPPVDLPPIGIPPIVKPPVNLPPIGIPPIVKPPVKLPPIGIPPIVKPPVILPPVGIPPIVKPPVKLPPVGIPPIVKPPVDLPPVGIPPVTVPPIVKPPVDLPPIGIPPVTVPPVIKPSPKGKKPCPPTTKATCPIDTLKLGACVDLLGGLVHIGLGDPAVNECCPILSGLVELEAAACLCTTLKVKLLNLKIYVPLALQLLVTCGKSPPPGYTCSI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="18581" e_stop="19366"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="18581" e_stop="19366" e_length="786"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18581" stop="19332"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371973" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18687" stop="19366"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588243" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTAAAACTGCTTTCATGCATTCAGACATCAACGAAAAAAGACATCGAAAATCGCAACTAAACTCTCCAGTAAGTCTCTACTGATACCAAATTATGATACAAGAAAGTCGAATCTCGGGTGACACGGAGGAGACAAATGTTATAACAGTCTCAAAGAAAACAGAAATCAGCTACAAAGGCTATTCTAGACAAGTATTTAACATCACAGAAAAAACCTAAATGGGGACTTCCATTTTTATTGGTGCATGTAAGGTATTTACTGATGCATTTTGAAGCCAATCCTTGGCGCAAATGAGGGCCTCCACGGTCTCAGGTCGCAAGGAACACCTGTAGCGATCCATCTCTTTGCCTACCGTGCTAAACACAGAATCAGCTGTTACAGTAGAAACTGGAACAGACAAGATGTCACGAGCCATTTTTGACAGAGTTGGGTACTTCATTCTGTTCAGTTTCCACCACCCAACAACGTCAAACTCATGAACACGAGGCAACAAGGACTCATCCAAATATTGATCAAGTTCTGACCTTGACTGCTGGCTTGTTGTCTCCATAATATAGGCATCAAAATCTGTAAGTCCGCCCCCACCATTCTCCTGCTTCAAAGCTCCATCATCTACCTCTTCAGCATAAGCTGGGGTCAGAGGCAGAGGAAGTGCCACGTATTCAAGGAAGAGCTCGTGGATTCCCTCCTCAACGAACTTCACAAAGGTGGCAGCTTCTTCACCATATATTTTTGTAAAGCTGAATTCTACAAGTTTCATTTTGAAGCGTGGATCCATTACAACG</gDNA_template>
            <first_frame> I  K  T  A  F  M  H  S  D  I  N  E  K  R  H  R  K  S  Q  L  N  S  P  V  S  L  Y  *  Y  Q  I  M  I  Q  E  S  R  I  S  G  D  T  E  E  T  N  V  I  T  V  S  K  K  T  E  I  S  Y  K  G  Y  S  R  Q  V  F  N  I  T  E  K  T  *  M  G  T  S  I  F  I  G  A  C  K  V  F  T  D  A  F  *  S  Q  S  L  A  Q  M  R  A  S  T  V  S  G  R  K  E  H  L  *  R  S  I  S  L  P  T  V  L  N  T  E  S  A  V  T  V  E  T  G  T  D  K  M  S  R  A  I  F  D  R  V  G  Y  F  I  L  F  S  F  H  H  P  T  T  S  N  S  *  T  R  G  N  K  D  S  S  K  Y  *  S  S  S  D  L  D  C  W  L  V  V  S  I  I  *  A  S  K  S  V  S  P  P  P  P  F  S  C  F  K  A  P  S  S  T  S  S  A  *  A  G  V  R  G  R  G  S  A  T  Y  S  R  K  S  S  W  I  P  S  S  T  N  F  T  K  V  A  A  S  S  P  Y  I  F  V  K  L  N  S  T  S  F  I  L  K  R  G  S  I  T  T </first_frame>
            <second_frame>  L  K  L  L  S  C  I  Q  T  S  T  K  K  D  I  E  N  R  N  *  T  L  Q  *  V  S  T  D  T  K  L  *  Y  K  K  V  E  S  R  V  T  R  R  R  Q  M  L  *  Q  S  Q  R  K  Q  K  S  A  T  K  A  I  L  D  K  Y  L  T  S  Q  K  K  P  K  W  G  L  P  F  L  L  V  H  V  R  Y  L  L  M  H  F  E  A  N  P  W  R  K  *  G  P  P  R  S  Q  V  A  R  N  T  C  S  D  P  S  L  C  L  P  C  *  T  Q  N  Q  L  L  Q  *  K  L  E  Q  T  R  C  H  E  P  F  L  T  E  L  G  T  S  F  C  S  V  S  T  T  Q  Q  R  Q  T  H  E  H  E  A  T  R  T  H  P  N  I  D  Q  V  L  T  L  T  A  G  L  L  S  P  *  Y  R  H  Q  N  L  *  V  R  P  H  H  S  P  A  S  K  L  H  H  L  P  L  Q  H  K  L  G  S  E  A  E  E  V  P  R  I  Q  G  R  A  R  G  F  P  P  Q  R  T  S  Q  R  W  Q  L  L  H  H  I  F  L  *  S  *  I  L  Q  V  S  F  *  S  V  D  P  L  Q   </second_frame>
            <third_frame>   *  N  C  F  H  A  F  R  H  Q  R  K  K  T  S  K  I  A  T  K  L  S  S  K  S  L  L  I  P  N  Y  D  T  R  K  S  N  L  G  *  H  G  G  D  K  C  Y  N  S  L  K  E  N  R  N  Q  L  Q  R  L  F  *  T  S  I  *  H  H  R  K  N  L  N  G  D  F  H  F  Y  W  C  M  *  G  I  Y  *  C  I  L  K  P  I  L  G  A  N  E  G  L  H  G  L  R  S  Q  G  T  P  V  A  I  H  L  F  A  Y  R  A  K  H  R  I  S  C  Y  S  R  N  W  N  R  Q  D  V  T  S  H  F  *  Q  S  W  V  L  H  S  V  Q  F  P  P  P  N  N  V  K  L  M  N  T  R  Q  Q  G  L  I  Q  I  L  I  K  F  *  P  *  L  L  A  C  C  L  H  N  I  G  I  K  I  C  K  S  A  P  T  I  L  L  L  Q  S  S  I  I  Y  L  F  S  I  S  W  G  Q  R  Q  R  K  C  H  V  F  K  E  E  L  V  D  S  L  L  N  E  L  H  K  G  G  S  F  F  T  I  Y  F  C  K  A  E  F  Y  K  F  H  F  E  A  W  I  H  Y  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19111" stop="19365"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>255</number_coding_nucleotides>
                  <number_encoded_amino_acids>85</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLACCLHNIGIKICKSAPTILLLQSSIIYLFSISWGQRQRKCHVFKEELVDSLLNELHKGGSFFTIYFCKAEFYKFHFEAWIHYN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="16269" PGL_stop="15500"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16269" e_stop="15893"/>
            <exon e_start="15667" e_stop="15500"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.997"/>
          <exon-only e_score="0.952"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="16269" e_stop="15893" e_length="377"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="15892" i_stop="15668" i_length="225"/>
          </intron>
          <exon e_serial="2" e_score="0.952">
            <gDNA_exon_boundary e_start="15667" e_stop="15500" e_length="168"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16269" stop="16108"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E440118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16192" stop="15893"/>
              <exon start="15667" stop="15500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279223" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGTGTAGCCAGGTGGTGGACTCTTTCCACAAGTAACAAGGAGTTGAAGTGCTAGAGGTACATAGATTTTGAGGTTAAGTAATTTGACTTTAAGTGTTGTGCAAAGGCAAGCAGCAGCTTCAAGTTCAACAAGCCCACTAAGTATTGGACAACATTCATTAACAGCTGGATCACCAAGGCCAATATGAACAAGCCCACCTAAAAGATCCACACAAGCCCCAAGTTTCAATGTGTCAATTGGGCATGTTGCCTTTGTTGTTGGTGGACAAGGTTTTTTCCCTTTAGGTGATGGTTTAATTACTGGTGGAACTGTGACTGGTGGAATTCCAATAGGTGGCAAATCAACTGGAGGTTTTACAATTGGTGGAACTGTGACCG : GTGGAATTCCGATAGGGGGCAAATCGACAGGGGGTTTGACAATGGGAGTGGGAACTTTGGGCTTTTTGGGCTTGTGAGAAGGTTTACCACAATAGCCACATCCAAGAATGGGAGTGAATGAAGAAAGGAAAAGCATAGAAATGAAAAGAAGTGAAGTTATCTTAGAGA</gDNA_template>
            <first_frame> S  V  A  R  W  W  T  L  S  T  S  N  K  E  L  K  C  *  R  Y  I  D  F  E  V  K  *  F  D  F  K  C  C  A  K  A  S  S  S  F  K  F  N  K  P  T  K  Y  W  T  T  F  I  N  S  W  I  T  K  A  N  M  N  K  P  T  *  K  I  H  T  S  P  K  F  Q  C  V  N  W  A  C  C  L  C  C  W  W  T  R  F  F  P  F  R  *  W  F  N  Y  W  W  N  C  D  W  W  N  S  N  R  W  Q  I  N  W  R  F  Y  N  W  W  N  C  D  R :   W  N  S  D  R  G  Q  I  D  R  G  F  D  N  G  S  G  N  F  G  L  F  G  L  V  R  R  F  T  T  I  A  T  S  K  N  G  S  E  *  R  K  E  K  H  R  N  E  K  K  *  S  Y  L  R   </first_frame>
            <second_frame>  V  *  P  G  G  G  L  F  P  Q  V  T  R  S  *  S  A  R  G  T  *  I  L  R  L  S  N  L  T  L  S  V  V  Q  R  Q  A  A  A  S  S  S  T  S  P  L  S  I  G  Q  H  S  L  T  A  G  S  P  R  P  I  *  T  S  P  P  K  R  S  T  Q  A  P  S  F  N  V  S  I  G  H  V  A  F  V  V  G  G  Q  G  F  F  P  L  G  D  G  L  I  T  G  G  T  V  T  G  G  I  P  I  G  G  K  S  T  G  G  F  T  I  G  G  T  V  T   : G  G  I  P  I  G  G  K  S  T  G  G  L  T  M  G  V  G  T  L  G  F  L  G  L  *  E  G  L  P  Q  *  P  H  P  R  M  G  V  N  E  E  R  K  S  I  E  M  K  R  S  E  V  I  L  E  </second_frame>
            <third_frame>   C  S  Q  V  V  D  S  F  H  K  *  Q  G  V  E  V  L  E  V  H  R  F  *  G  *  V  I  *  L  *  V  L  C  K  G  K  Q  Q  L  Q  V  Q  Q  A  H  *  V  L  D  N  I  H  *  Q  L  D  H  Q  G  Q  Y  E  Q  A  H  L  K  D  P  H  K  P  Q  V  S  M  C  Q  L  G  M  L  P  L  L  L  V  D  K  V  F  S  L  *  V  M  V  *  L  L  V  E  L  *  L  V  E  F  Q  *  V  A  N  Q  L  E  V  L  Q  L  V  E  L  *  P  :  V  E  F  R  *  G  A  N  R  Q  G  V  *  Q  W  E  W  E  L  W  A  F  W  A  C  E  K  V  Y  H  N  S  H  I  Q  E  W  E  *  M  K  K  G  K  A  *  K  *  K  E  V  K  L  S  *  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16082" stop="15893"/>
                    <exon start="15667" stop="15591"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>264</number_coding_nucleotides>
                  <number_encoded_amino_acids>88</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSPPKRSTQAPSFNVSIGHVAFVVGGQGFFPLGDGLITGGTVTGGIPIGGKSTGGFTIGGTVTGGIPIGGKSTGGLTMGVGTLGFLGL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15981" stop="15893"/>
                    <exon start="15667" stop="15547"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WFNYWWNCDWWNSNRWQINWRFYNWWNCDRWNSDRGQIDRGFDNGSGNFGLFGLVRRFTTIATSKNGSE*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15985" e_stop="15833"/>
            <exon e_start="15667" e_stop="15504"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.876"/>
          <exon-only e_score="0.927"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.876">
            <gDNA_exon_boundary e_start="15985" e_stop="15833" e_length="153"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="15832" i_stop="15668" i_length="165"/>
          </intron>
          <exon e_serial="2" e_score="0.927">
            <gDNA_exon_boundary e_start="15667" e_stop="15504" e_length="164"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15985" stop="15833"/>
              <exon start="15667" stop="15504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439686" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGATGGTTTAATTACTGGTGGAACTGTGACTGGTGGAATTCCAATAGGTGGCAAATCAACTGGAGGTTTTACAATTGGTGGAACTGTGACCGGTGGAATCCCAACAGGTGGCAAATCAACAGGTGGTTTTACGATTGGTGGAATTCCGACAG : GTGGAATTCCGATAGGGGGCAAATCGACAGGGGGTTTGACAATGGGAGTGGGAACTTTGGGCTTTTTGGGCTTGTGAGAAGGTTTACCACAATAGCCACATCCAAGAATGGGAGTGAATGAAGAAAGGAAAAGCATAGAAATGAAAAGAAGTGAAGTTATCTTA</gDNA_template>
            <first_frame> V  M  V  *  L  L  V  E  L  *  L  V  E  F  Q  *  V  A  N  Q  L  E  V  L  Q  L  V  E  L  *  P  V  E  S  Q  Q  V  A  N  Q  Q  V  V  L  R  L  V  E  F  R  Q  :  V  E  F  R  *  G  A  N  R  Q  G  V  *  Q  W  E  W  E  L  W  A  F  W  A  C  E  K  V  Y  H  N  S  H  I  Q  E  W  E  *  M  K  K  G  K  A  *  K  *  K  E  V  K  L  S   </first_frame>
            <second_frame>  *  W  F  N  Y  W  W  N  C  D  W  W  N  S  N  R  W  Q  I  N  W  R  F  Y  N  W  W  N  C  D  R  W  N  P  N  R  W  Q  I  N  R  W  F  Y  D  W  W  N  S  D  R :   W  N  S  D  R  G  Q  I  D  R  G  F  D  N  G  S  G  N  F  G  L  F  G  L  V  R  R  F  T  T  I  A  T  S  K  N  G  S  E  *  R  K  E  K  H  R  N  E  K  K  *  S  Y  L  </second_frame>
            <third_frame>   D  G  L  I  T  G  G  T  V  T  G  G  I  P  I  G  G  K  S  T  G  G  F  T  I  G  G  T  V  T  G  G  I  P  T  G  G  K  S  T  G  G  F  T  I  G  G  I  P  T   : G  G  I  P  I  G  G  K  S  T  G  G  L  T  M  G  V  G  T  L  G  F  L  G  L  *  E  G  L  P  Q  *  P  H  P  R  M  G  V  N  E  E  R  K  S  I  E  M  K  R  S  E  V  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15981" stop="15833"/>
                    <exon start="15667" stop="15547"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WFNYWWNCDWWNSNRWQINWRFYNWWNCDRWNPNRWQINRWFYDWWNSDRWNSDRGQIDRGFDNGSGNFGLFGLVRRFTTIATSKNGSE*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15983" stop="15833"/>
                    <exon start="15667" stop="15591"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DGLITGGTVTGGIPIGGKSTGGFTIGGTVTGGIPTGGKSTGGFTIGGIPTGGIPIGGKSTGGLTMGVGTLGFLGL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="17103" PGL_stop="16599"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17103" e_stop="16599"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="17103" e_stop="16599" e_length="505"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17103" stop="16599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200186" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCAATTCATTGAAACATGACATTCAAACGATACACTGAAATAATAATAATAGTAATAATGATAATAATAATAATAATTCCATTAAATAACAATTCCACAAAGCCAAAATAAAACAATACATAAAATACAATTTTGAGGGGTGGGGTGGGGTGGAGAGAAATTAAATAAATCATAAATTGGACATCCTTTCATGGCAATCCATGCAATTTCTTCAAATTTCAGATTGGAAACCTGCAATTTAATCAGAATTTAAATTAATAATAAGTTTAATTAACAATAAAAATACGTAGCTAATCCTAGTTACTAACGAATTATTAAAAAATATATGTTTCATTTCGCGATAGATTAGCAGCAAATTTCGTATCTTATTCTTTTTTTTCCCTTTCTGAGAGACCAAATGAATAACAACGCAAGTTTAGATTTAAAATTCAAGGTAAAATCAGGTTTAATATATTTCTATATTATCTATATTTGTTAATATGTAATAACAAGTAACTAATTATAT</gDNA_template>
            <first_frame> P  I  H  *  N  M  T  F  K  R  Y  T  E  I  I  I  I  V  I  M  I  I  I  I  I  I  P  L  N  N  N  S  T  K  P  K  *  N  N  T  *  N  T  I  L  R  G  G  V  G  W  R  E  I  K  *  I  I  N  W  T  S  F  H  G  N  P  C  N  F  F  K  F  Q  I  G  N  L  Q  F  N  Q  N  L  N  *  *  *  V  *  L  T  I  K  I  R  S  *  S  *  L  L  T  N  Y  *  K  I  Y  V  S  F  R  D  R  L  A  A  N  F  V  S  Y  S  F  F  S  L  S  E  R  P  N  E  *  Q  R  K  F  R  F  K  I  Q  G  K  I  R  F  N  I  F  L  Y  Y  L  Y  L  L  I  C  N  N  K  *  L  I  I  </first_frame>
            <second_frame>  Q  F  I  E  T  *  H  S  N  D  T  L  K  *  *  *  *  *  *  *  *  *  *  *  *  F  H  *  I  T  I  P  Q  S  Q  N  K  T  I  H  K  I  Q  F  *  G  V  G  W  G  G  E  K  L  N  K  S  *  I  G  H  P  F  M  A  I  H  A  I  S  S  N  F  R  L  E  T  C  N  L  I  R  I  *  I  N  N  K  F  N  *  Q  *  K  Y  V  A  N  P  S  Y  *  R  I  I  K  K  Y  M  F  H  F  A  I  D  *  Q  Q  I  S  Y  L  I  L  F  F  P  F  L  R  D  Q  M  N  N  N  A  S  L  D  L  K  F  K  V  K  S  G  L  I  Y  F  Y  I  I  Y  I  C  *  Y  V  I  T  S  N  *  L  Y </second_frame>
            <third_frame>   N  S  L  K  H  D  I  Q  T  I  H  *  N  N  N  N  S  N  N  D  N  N  N  N  N  S  I  K  *  Q  F  H  K  A  K  I  K  Q  Y  I  K  Y  N  F  E  G  W  G  G  V  E  R  N  *  I  N  H  K  L  D  I  L  S  W  Q  S  M  Q  F  L  Q  I  S  D  W  K  P  A  I  *  S  E  F  K  L  I  I  S  L  I  N  N  K  N  T  *  L  I  L  V  T  N  E  L  L  K  N  I  C  F  I  S  R  *  I  S  S  K  F  R  I  L  F  F  F  F  P  F  *  E  T  K  *  I  T  T  Q  V  *  I  *  N  S  R  *  N  Q  V  *  Y  I  S  I  L  S  I  F  V  N  M  *  *  Q  V  T  N  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0211M21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="23693" PGL_stop="18459"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23693" e_stop="23515"/>
            <exon e_start="21623" e_stop="18459"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="0.994"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="23693" e_stop="23515" e_length="179"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="21623" e_stop="18459" e_length="3165"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23693" stop="23515"/>
              <exon start="21623" stop="20870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738139" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23693" stop="23515"/>
              <exon start="21623" stop="21008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736023" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23607" stop="23515"/>
              <exon start="21623" stop="21022"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371974" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23607" stop="23515"/>
              <exon start="21623" stop="21298"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E283043" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20936" stop="20036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20660" stop="20237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20144" stop="19553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20081" stop="19491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19563" stop="18821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19486" stop="19327"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19258" stop="18913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19127" stop="18622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19079" stop="18651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419100" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19076" stop="18576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18840" stop="18459"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349037" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCAATTCTCTTTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAG : CCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAGATGATACATGAGCAAAGCCATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGATTGTGCCGGAAAATGAGATGCAAAATGAGATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAAAATGAGATGACACATGAGCATAATCACGAGATGGTGCCGGAAAATGAGATGATGCATGAACATGGTCATGAGATGGTGCCGGAACATGAGATGATGCATGAACATAGTCATGAGATGATGCCGGAACATGAGATGATGCATGAACATCATATGGTGCTTGGGCATGAGATAGTCCCTAGCAATGAGATGGTCCCGGATGATGAGATGATCCCACTAAATGAGATGGTCCTTGCTGAACCACAACCCAACTATATAGAAACACCTCCAAACAATCCAGAAACACAGCCCAGCAAGCGTAGGAAGAAGAAGTCAATAGTTTGGGAACACTTCACCATTGAAAATGTCGGCGGTGGAACTAGAAGGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATATAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCAAAAGGAACCTGTCCAGTTGTCCTACGTAACCAACAGAATAATCAATTGAGCCCATATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTTCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTGCAGAATCTTCAACCTCGTTTTGATATGGTGAGCTTCAACACTGTGCAAGGAGATTGTGTGGCAACTTATCTTAGAGAGAAGCAAGCCATTCAGAAGGTCATTGAGGGAGTGCCTGGGCGTATCTGCTTAACGCTAGATATGTGGTCCTCCTGCTACACTGTGGGCTATGTGTTCATAACCGGGCAGTATATTGACAGTGAGTGGAAAATTCACAGGAAAATACTCAATATCATTATGGAACCATATCCAGATTCTGACACGGCTTTCAGCCATGCTGTTGCTGCTTGCCTTTCTGACTGGAGTATGGAAGGTAAGTTGTTTTCTGTCACTATTAATCAACCGTTGGGTGATGCTTCTGTTGATAATCTTAGAGCTTTACTATCTGTGAAGAACCCTCTTGTGCTCAACGGTCAGTTGTTGGTCGGAAGTTGTCTTGCTCGAACTTTAAGCAGCATTGCCCAAGGTGCATTTAATTTTTTGCATGAAACTGTTAAGAAAGTAAGAGATAGCGTCAAGTACGTGAAAACATCAGAATTTCACGAGGAAAAGTTTATTGAGCTCAAACAGCAGCTTCAAGTGCCAAGCACAAAGACTTTGGCTCTTGATGACCAGACTCAATGGAACACCACATATGAGATGTTGTTAGCTGCATCAGAGTTAAAGGAAGTGTTTTCATGCTTGGATACATCTGATCCCGATTACAAGGATGCCCTGTCAATGGATGATTGGAAGCAAGTTGAGGTTCTTTGTACTTACTTGAAGATCCTCTTTGACACTGCCAATCTTCTGACTGCACCAACAATTCCAACAACCAACACATTCTTCCATGAAGCATGGAAGATTCAATTGGAACTGGCTCGTGCTGCAGCAAGTGAAGATCCATCCATAAGCGGTCTTACCAAAACAATGCAAGAGGAGTTTGATAAATACTGGAAGAGTTGTTGTCTAATATTAGCTATTGCCGTTGTAATGGATCCACGCTTCAAAATGAAACTTGTAGAATTCAGCTTTACAAAAATATATGGTGAAGAAGCTGCCACCTTTGTGAAGTTCGTTGAGGAGGGAATCCACGAGCTCTTCCTTGAATACGTGGCACTTCCTCTGCCTCTGACCCCAGCTTATGCTGAAGAGGTAGATGATGGAGCTTTGAAGCAGGAGAATGGTGGGGGCGGACTTACAGATTTTGATGCCTATATTATGGAGACAACAAGCCAGCAGTCAAGGTCAGAACTTGATCAATATTTGGATGAGTCCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATTTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACCTTACATGCACCAATAAAAATGGAAGTCCCCATTTAGGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTGTCTCCTCCGTGTCACCCGAGATTCGACTTTCTTGTATCATAATTTGGTATCAGTAGAGACTTACTGGAGAGTTTAGTTGCGATTTTCGATGTCTTTTTTCGTTGATGTCTGAATGCATGAAAGCAGTTTTAATCTGGTGCATGATATGAGTATATGTTTATACAGTTGTATTGCCTATCTATGTTCTATATTGCCTTGCATTATAGAGTTTATTTTCTTGGTATAAAATTGTTATTTTAGCTGCATTTTTTATGT</gDNA_template>
            <first_frame> P  N  S  L  F  L  S  L  S  S  F  S  L  L  Q  L  R  P  K  T  *  I  *  F  T  T  G  A  *  K  T  R  R  L  R  N  S  Y  L  G  F  A  Q  N  *  I  S  V  I  G  F  F  S  K  F  K  I  S  N  S :   L  E  L  L  D  I  D  G  N  P  R  N  R  S  S  S  S  N  P  Y  *  E  *  *  D  G  A  E  K  *  D  D  T  *  A  W  *  *  D  G  A  A  K  *  D  D  T  *  A  W  *  *  D  G  A  A  K  *  D  D  T  *  A  K  P  *  D  C  A  G  K  *  D  A  K  *  D  D  T  *  D  C  A  G  K  *  D  A  K  *  D  D  T  *  A  Q  P  *  H  C  A  *  K  *  D  A  K  *  A  Q  P  *  D  Y  A  G  K  *  D  D  T  *  A  Q  P  *  D  C  A  G  K  *  D  D  T  *  A  Q  S  *  D  S  A  G  K  *  D  D  T  *  V  Q  S  R  D  S  A  T  K  *  D  G  T  *  A  *  S  *  N  G  A  R  *  *  D  D  T  *  A  H  S  R  D  G  A  G  K  *  D  D  T  *  S  *  S  R  D  G  A  G  K  *  D  D  T  *  A  *  S  R  D  G  A  G  K  *  D  D  A  *  T  W  S  *  D  G  A  G  T  *  D  D  A  *  T  *  S  *  D  D  A  G  T  *  D  D  A  *  T  S  Y  G  A  W  A  *  D  S  P  *  Q  *  D  G  P  G  *  *  D  D  P  T  K  *  D  G  P  C  *  T  T  T  Q  L  Y  R  N  T  S  K  Q  S  R  N  T  A  Q  Q  A  *  E  E  E  V  N  S  L  G  T  L  H  H  *  K  C  R  R  W  N  *  K  G  T  M  *  A  V  Q  A  I  I  C  I  *  Y  R  F  K  S  S  W  H  *  S  P  E  T  P  Y  C  K  R  N  L  S  S  C  P  T  *  P  T  E  *  S  I  E  P  I  *  Y  T  S  *  D  E  W  I  W  W  *  Y  *  C  T  K  T  A  L  *  D  C  I  F  S  L  P  C  F  *  S  *  P  V  P  S  R  D  L  *  D  D  H  H  A  R  L  S  P  S  H  G  *  A  S  R  L  S  C  F  C  A  E  S  S  T  S  F  *  Y  G  E  L  Q  H  C  A  R  R  L  C  G  N  L  S  *  R  E  A  S  H  S  E  G  H  *  G  S  A  W  A  Y  L  L  N  A  R  Y  V  V  L  L  L  H  C  G  L  C  V  H  N  R  A  V  Y  *  Q  *  V  E  N  S  Q  E  N  T  Q  Y  H  Y  G  T  I  S  R  F  *  H  G  F  Q  P  C  C  C  C  L  P  F  *  L  E  Y  G  R  *  V  V  F  C  H  Y  *  S  T  V  G  *  C  F  C  *  *  S  *  S  F  T  I  C  E  E  P  S  C  A  Q  R  S  V  V  G  R  K  L  S  C  S  N  F  K  Q  H  C  P  R  C  I  *  F  F  A  *  N  C  *  E  S  K  R  *  R  Q  V  R  E  N  I  R  I  S  R  G  K  V  Y  *  A  Q  T  A  A  S  S  A  K  H  K  D  F  G  S  *  *  P  D  S  M  E  H  H  I  *  D  V  V  S  C  I  R  V  K  G  S  V  F  M  L  G  Y  I  *  S  R  L  Q  G  C  P  V  N  G  *  L  E  A  S  *  G  S  L  Y  L  L  E  D  P  L  *  H  C  Q  S  S  D  C  T  N  N  S  N  N  Q  H  I  L  P  *  S  M  E  D  S  I  G  T  G  S  C  C  S  K  *  R  S  I  H  K  R  S  Y  Q  N  N  A  R  G  V  *  *  I  L  E  E  L  L  S  N  I  S  Y  C  R  C  N  G  S  T  L  Q  N  E  T  C  R  I  Q  L  Y  K  N  I  W  *  R  S  C  H  L  C  E  V  R  *  G  G  N  P  R  A  L  P  *  I  R  G  T  S  S  A  S  D  P  S  L  C  *  R  G  R  *  W  S  F  E  A  G  E  W  W  G  R  T  Y  R  F  *  C  L  Y  Y  G  D  N  K  P  A  V  K  V  R  T  *  S  I  F  G  *  V  L  V  A  S  C  S  *  V  *  R  C  W  V  V  E  T  E  Q  N  E  V  P  N  S  V  K  N  G  S  *  H  L  V  C  S  S  F  Y  C  N  S  *  F  C  V  *  H  G  R  Q  R  D  G  S  L  Q  V  F  L  A  T  *  D  R  G  G  P  H  L  R  Q  G  L  A  S  K  C  I  S  K  Y  L  T  C  T  N  K  N  G  S  P  H  L  G  F  F  C  D  V  K  Y  L  S  R  I  A  F  V  A  D  F  C  F  L  *  D  C  Y  N  I  C  L  L  R  V  T  R  D  S  T  F  L  Y  H  N  L  V  S  V  E  T  Y  W  R  V  *  L  R  F  S  M  S  F  F  V  D  V  *  M  H  E  S  S  F  N  L  V  H  D  M  S  I  C  L  Y  S  C  I  A  Y  L  C  S  I  L  P  C  I  I  E  F  I  F  L  V  *  N  C  Y  F  S  C  I  F  Y   </first_frame>
            <second_frame>  P  I  L  F  S  S  L  S  L  L  S  L  S  S  S  Y  G  R  K  P  R  S  D  S  L  P  E  P  E  K  L  V  G  F  E  I  P  I  W  V  L  L  R  I  E  F  R  *  L  G  S  S  Q  N  S  K  F  P  T   : A  L  S  F  W  I  L  M  A  T  P  E  T  A  A  P  P  A  T  P  T  E  N  N  E  M  V  P  K  N  E  M  I  H  E  H  G  D  E  M  V  P  Q  N  E  M  I  H  E  H  G  D  E  M  V  P  Q  N  E  M  I  H  E  Q  S  H  E  I  V  P  E  N  E  M  Q  N  E  M  I  H  E  I  V  P  E  N  E  M  Q  N  E  M  I  H  E  H  S  H  D  I  V  P  E  N  E  M  Q  N  E  H  S  H  E  I  M  P  E  N  E  M  I  R  E  H  S  H  E  I  V  R  E  N  E  M  I  P  E  H  N  H  E  I  V  P  E  N  E  M  I  H  E  C  S  H  E  T  V  P  Q  N  E  M  V  H  E  H  S  H  E  M  V  P  D  N  E  M  T  H  E  H  T  H  E  M  V  P  E  N  E  M  T  H  D  H  N  H  E  M  V  Q  E  N  E  M  T  H  E  H  N  H  E  M  V  P  E  N  E  M  M  H  E  H  G  H  E  M  V  P  E  H  E  M  M  H  E  H  S  H  E  M  M  P  E  H  E  M  M  H  E  H  H  M  V  L  G  H  E  I  V  P  S  N  E  M  V  P  D  D  E  M  I  P  L  N  E  M  V  L  A  E  P  Q  P  N  Y  I  E  T  P  P  N  N  P  E  T  Q  P  S  K  R  R  K  K  K  S  I  V  W  E  H  F  T  I  E  N  V  G  G  G  T  R  R  A  Q  C  K  Q  C  K  Q  S  F  A  Y  S  T  G  S  K  V  A  G  T  S  H  L  K  R  H  I  A  K  G  T  C  P  V  V  L  R  N  Q  Q  N  N  Q  L  S  P  Y  S  T  P  P  K  M  S  G  Y  G  G  S  T  D  A  P  K  R  R  Y  R  T  A  S  S  P  Y  L  A  F  D  P  D  R  C  R  Q  E  I  S  K  M  I  I  M  H  D  Y  P  L  H  M  V  E  H  P  G  F  L  A  F  V  Q  N  L  Q  P  R  F  D  M  V  S  F  N  T  V  Q  G  D  C  V  A  T  Y  L  R  E  K  Q  A  I  Q  K  V  I  E  G  V  P  G  R  I  C  L  T  L  D  M  W  S  S  C  Y  T  V  G  Y  V  F  I  T  G  Q  Y  I  D  S  E  W  K  I  H  R  K  I  L  N  I  I  M  E  P  Y  P  D  S  D  T  A  F  S  H  A  V  A  A  C  L  S  D  W  S  M  E  G  K  L  F  S  V  T  I  N  Q  P  L  G  D  A  S  V  D  N  L  R  A  L  L  S  V  K  N  P  L  V  L  N  G  Q  L  L  V  G  S  C  L  A  R  T  L  S  S  I  A  Q  G  A  F  N  F  L  H  E  T  V  K  K  V  R  D  S  V  K  Y  V  K  T  S  E  F  H  E  E  K  F  I  E  L  K  Q  Q  L  Q  V  P  S  T  K  T  L  A  L  D  D  Q  T  Q  W  N  T  T  Y  E  M  L  L  A  A  S  E  L  K  E  V  F  S  C  L  D  T  S  D  P  D  Y  K  D  A  L  S  M  D  D  W  K  Q  V  E  V  L  C  T  Y  L  K  I  L  F  D  T  A  N  L  L  T  A  P  T  I  P  T  T  N  T  F  F  H  E  A  W  K  I  Q  L  E  L  A  R  A  A  A  S  E  D  P  S  I  S  G  L  T  K  T  M  Q  E  E  F  D  K  Y  W  K  S  C  C  L  I  L  A  I  A  V  V  M  D  P  R  F  K  M  K  L  V  E  F  S  F  T  K  I  Y  G  E  E  A  A  T  F  V  K  F  V  E  E  G  I  H  E  L  F  L  E  Y  V  A  L  P  L  P  L  T  P  A  Y  A  E  E  V  D  D  G  A  L  K  Q  E  N  G  G  G  G  L  T  D  F  D  A  Y  I  M  E  T  T  S  Q  Q  S  R  S  E  L  D  Q  Y  L  D  E  S  L  L  P  R  V  H  E  F  D  V  V  G  W  W  K  L  N  R  M  K  Y  P  T  L  S  K  M  A  R  D  I  L  S  V  P  V  S  T  V  T  A  D  S  V  F  S  T  V  G  K  E  M  D  R  Y  R  C  S  L  R  P  E  T  V  E  A  L  I  C  A  K  D  W  L  Q  N  A  S  V  N  T  L  H  A  P  I  K  M  E  V  P  I  *  V  F  S  V  M  L  N  T  C  L  E  *  P  L  *  L  I  S  V  F  F  E  T  V  I  T  F  V  S  S  V  S  P  E  I  R  L  S  C  I  I  I  W  Y  Q  *  R  L  T  G  E  F  S  C  D  F  R  C  L  F  S  L  M  S  E  C  M  K  A  V  L  I  W  C  M  I  *  V  Y  V  Y  T  V  V  L  P  I  Y  V  L  Y  C  L  A  L  *  S  L  F  S  W  Y  K  I  V  I  L  A  A  F  F  M  </second_frame>
            <third_frame>   Q  F  S  F  P  L  S  L  F  F  L  S  P  P  A  T  A  E  N  L  D  L  I  H  Y  R  S  L  K  N  S  S  A  S  K  F  L  S  G  F  C  S  E  L  N  F  G  N  W  V  L  L  K  I  Q  N  F  Q  Q  :  P  *  A  S  G  Y  *  W  Q  P  Q  K  P  Q  L  L  Q  Q  P  L  L  R  I  M  R  W  C  R  K  M  R  *  Y  M  S  M  V  M  R  W  C  R  K  M  R  *  Y  M  S  M  V  M  R  W  C  R  K  M  R  *  Y  M  S  K  A  M  R  L  C  R  K  M  R  C  K  M  R  *  Y  M  R  L  C  R  K  M  R  C  K  M  R  *  Y  M  S  T  A  M  T  L  C  L  K  M  R  C  K  M  S  T  A  M  R  L  C  R  K  M  R  *  Y  V  S  T  A  M  R  L  C  G  K  M  R  *  Y  L  S  T  I  M  R  *  C  R  K  M  R  *  Y  M  S  A  V  T  R  Q  C  H  K  M  R  W  Y  M  S  I  V  M  K  W  C  Q  I  M  R  *  H  M  S  T  L  T  R  W  C  R  K  M  R  *  H  M  I  I  I  T  R  W  C  R  K  M  R  *  H  M  S  I  I  T  R  W  C  R  K  M  R  *  C  M  N  M  V  M  R  W  C  R  N  M  R  *  C  M  N  I  V  M  R  *  C  R  N  M  R  *  C  M  N  I  I  W  C  L  G  M  R  *  S  L  A  M  R  W  S  R  M  M  R  *  S  H  *  M  R  W  S  L  L  N  H  N  P  T  I  *  K  H  L  Q  T  I  Q  K  H  S  P  A  S  V  G  R  R  S  Q  *  F  G  N  T  S  P  L  K  M  S  A  V  E  L  E  G  H  N  V  S  S  A  S  N  H  L  H  I  V  Q  V  Q  K  *  L  A  L  V  T  *  N  A  I  L  Q  K  E  P  V  Q  L  S  Y  V  T  N  R  I  I  N  *  A  H  I  V  H  L  L  R  *  V  D  M  V  V  V  L  M  H  Q  N  G  V  I  G  L  H  L  L  L  T  L  L  L  I  L  T  G  A  V  K  R  S  L  R  *  S  S  C  T  T  I  P  F  T  W  L  S  I  Q  A  F  L  L  L  C  R  I  F  N  L  V  L  I  W  *  A  S  T  L  C  K  E  I  V  W  Q  L  I  L  E  R  S  K  P  F  R  R  S  L  R  E  C  L  G  V  S  A  *  R  *  I  C  G  P  P  A  T  L  W  A  M  C  S  *  P  G  S  I  L  T  V  S  G  K  F  T  G  K  Y  S  I  S  L  W  N  H  I  Q  I  L  T  R  L  S  A  M  L  L  L  L  A  F  L  T  G  V  W  K  V  S  C  F  L  S  L  L  I  N  R  W  V  M  L  L  L  I  I  L  E  L  Y  Y  L  *  R  T  L  L  C  S  T  V  S  C  W  S  E  V  V  L  L  E  L  *  A  A  L  P  K  V  H  L  I  F  C  M  K  L  L  R  K  *  E  I  A  S  S  T  *  K  H  Q  N  F  T  R  K  S  L  L  S  S  N  S  S  F  K  C  Q  A  Q  R  L  W  L  L  M  T  R  L  N  G  T  P  H  M  R  C  C  *  L  H  Q  S  *  R  K  C  F  H  A  W  I  H  L  I  P  I  T  R  M  P  C  Q  W  M  I  G  S  K  L  R  F  F  V  L  T  *  R  S  S  L  T  L  P  I  F  *  L  H  Q  Q  F  Q  Q  P  T  H  S  S  M  K  H  G  R  F  N  W  N  W  L  V  L  Q  Q  V  K  I  H  P  *  A  V  L  P  K  Q  C  K  R  S  L  I  N  T  G  R  V  V  V  *  Y  *  L  L  P  L  *  W  I  H  A  S  K  *  N  L  *  N  S  A  L  Q  K  Y  M  V  K  K  L  P  P  L  *  S  S  L  R  R  E  S  T  S  S  S  L  N  T  W  H  F  L  C  L  *  P  Q  L  M  L  K  R  *  M  M  E  L  *  S  R  R  M  V  G  A  D  L  Q  I  L  M  P  I  L  W  R  Q  Q  A  S  S  Q  G  Q  N  L  I  N  I  W  M  S  P  C  C  L  V  F  M  S  L  T  L  L  G  G  G  N  *  T  E  *  S  T  Q  L  C  Q  K  W  L  V  T  S  C  L  F  Q  F  L  L  *  Q  L  I  L  C  L  A  R  *  A  K  R  W  I  A  T  G  V  P  C  D  L  R  P  W  R  P  S  F  A  P  R  I  G  F  K  M  H  Q  *  I  P  Y  M  H  Q  *  K  W  K  S  P  F  R  F  F  L  *  C  *  I  L  V  *  N  S  L  C  S  *  F  L  F  S  L  R  L  L  *  H  L  S  P  P  C  H  P  R  F  D  F  L  V  S  *  F  G  I  S  R  D  L  L  E  S  L  V  A  I  F  D  V  F  F  R  *  C  L  N  A  *  K  Q  F  *  S  G  A  *  Y  E  Y  M  F  I  Q  L  Y  C  L  S  M  F  Y  I  A  L  H  Y  R  V  Y  F  L  G  I  K  L  L  F  *  L  H  F  L  C </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23548" stop="23515"/>
                    <exon start="21623" stop="18796"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>2859</number_coding_nucleotides>
                  <number_encoded_amino_acids>953</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGSSQNSKFPTALSFWILMATPETAAPPATPTENNEMVPKNEMIHEHGDEMVPQNEMIHEHGDEMVPQNEMIHEQSHEIVPENEMQNEMIHEIVPENEMQNEMIHEHSHDIVPENEMQNEHSHEIMPENEMIREHSHEIVRENEMIPEHNHEIVPENEMIHECSHETVPQNEMVHEHSHEMVPDNEMTHEHTHEMVPENEMTHDHNHEMVQENEMTHEHNHEMVPENEMMHEHGHEMVPEHEMMHEHSHEMMPEHEMMHEHHMVLGHEIVPSNEMVPDDEMIPLNEMVLAEPQPNYIETPPNNPETQPSKRRKKKSIVWEHFTIENVGGGTRRAQCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPVVLRNQQNNQLSPYSTPPKMSGYGGSTDAPKRRYRTASSPYLAFDPDRCRQEISKMIIMHDYPLHMVEHPGFLAFVQNLQPRFDMVSFNTVQGDCVATYLREKQAIQKVIEGVPGRICLTLDMWSSCYTVGYVFITGQYIDSEWKIHRKILNIIMEPYPDSDTAFSHAVAACLSDWSMEGKLFSVTINQPLGDASVDNLRALLSVKNPLVLNGQLLVGSCLARTLSSIAQGAFNFLHETVKKVRDSVKYVKTSEFHEEKFIELKQQLQVPSTKTLALDDQTQWNTTYEMLLAASELKEVFSCLDTSDPDYKDALSMDDWKQVEVLCTYLKILFDTANLLTAPTIPTTNTFFHEAWKIQLELARAAASEDPSISGLTKTMQEEFDKYWKSCCLILAIAVVMDPRFKMKLVEFSFTKIYGEEAATFVKFVEEGIHELFLEYVALPLPLTPAYAEEVDDGALKQENGGGGLTDFDAYIMETTSQQSRSELDQYLDESLLPRVHEFDVVGWWKLNRMKYPTLSKMARDILSVPVSTVTADSVFSTVGKEMDRYRCSLRPETVEALICAKDWLQNASVNTLHAPIKMEVPI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="23682" e_stop="23515"/>
            <exon e_start="21623" e_stop="21490"/>
            <exon e_start="21351" e_stop="18459"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="0.967"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.948"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.967">
            <gDNA_exon_boundary e_start="23682" e_stop="23515" e_length="168"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891"/>
          </intron>
          <exon e_serial="2" e_score="0.948">
            <gDNA_exon_boundary e_start="21623" e_stop="21490" e_length="134"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21489" i_stop="21352" i_length="138"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="21351" e_stop="18459" e_length="2893"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23682" stop="23515"/>
              <exon start="21623" stop="21490"/>
              <exon start="21351" stop="21004"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419099" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23666" stop="23515"/>
              <exon start="21623" stop="21490"/>
              <exon start="21351" stop="20926"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E578684" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23666" stop="23515"/>
              <exon start="21623" stop="21490"/>
              <exon start="21351" stop="21174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443439" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20936" stop="20036"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727379" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20660" stop="20237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442296" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20144" stop="19553"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248601" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20081" stop="19491"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266707" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19563" stop="18821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19486" stop="19327"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19258" stop="18913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E297077" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19127" stop="18622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19079" stop="18651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419100" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19076" stop="18576"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734660" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18840" stop="18459"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E349037" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAG : CCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAG : ATGATACATGAGCACAGCCATGACATTGTGCCTGAAAATGAGATGCAAAATGAGCACAGCCATGAGATTATGCCGGAAAATGAGATGATACGTGAGCACAGCCATGAGATTGTGCGGGAAAATGAGATGATACCTGAGCACAATCATGAGATAGTGCCGGAAAATGAGATGATACATGAGTGCAGTCACGAGACAGTGCCACAAAATGAGATGGTACATGAGCATAGTCATGAAATGGTGCCAGATAATGAGATGACACATGAGCACACTCACGAGATGGTGCCGGAAAATGAGATGACACATGATCATAATCACGAGATGGTGCAGGAAAATGAGATGACACATGAGCATAATCACGAGATGGTGCCGGAAAATGAGATGATGCATGAACATGGTCATGAGATGGTGCCGGAACATGAGATGATGCATGAACATAGTCATGAGATGATGCCGGAACATGAGATGATGCATGAACATCATATGGTGCTTGGGCATGAGATAGTCCCTAGCAATGAGATGGTCCCGGATGATGAGATGATCCCACTAAATGAGATGGTCCTTGCTGAACCACAACCCAACTATATAGAAACACCTCCAAACAATCCAGAAACACAGCCCAGCAAGCGTAGGAAGAAGAAGTCAATAGTTTGGGAACACTTCACCATTGAAAATGTCGGCGGTGGAACTAGAAGGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATATAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCAAAAGGAACCTGTCCAGTTGTCCTACGTAACCAACAGAATAATCAATTGAGCCCATATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTTCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTGCAGAATCTTCAACCTCGTTTTGATATGGTGAGCTTCAACACTGTGCAAGGAGATTGTGTGGCAACTTATCTTAGAGAGAAGCAAGCCATTCAGAAGGTCATTGAGGGAGTGCCTGGGCGTATCTGCTTAACGCTAGATATGTGGTCCTCCTGCTACACTGTGGGCTATGTGTTCATAACCGGGCAGTATATTGACAGTGAGTGGAAAATTCACAGGAAAATACTCAATATCATTATGGAACCATATCCAGATTCTGACACGGCTTTCAGCCATGCTGTTGCTGCTTGCCTTTCTGACTGGAGTATGGAAGGTAAGTTGTTTTCTGTCACTATTAATCAACCGTTGGGTGATGCTTCTGTTGATAATCTTAGAGCTTTACTATCTGTGAAGAACCCTCTTGTGCTCAACGGTCAGTTGTTGGTCGGAAGTTGTCTTGCTCGAACTTTAAGCAGCATTGCCCAAGGTGCATTTAATTTTTTGCATGAAACTGTTAAGAAAGTAAGAGATAGCGTCAAGTACGTGAAAACATCAGAATTTCACGAGGAAAAGTTTATTGAGCTCAAACAGCAGCTTCAAGTGCCAAGCACAAAGACTTTGGCTCTTGATGACCAGACTCAATGGAACACCACATATGAGATGTTGTTAGCTGCATCAGAGTTAAAGGAAGTGTTTTCATGCTTGGATACATCTGATCCCGATTACAAGGATGCCCTGTCAATGGATGATTGGAAGCAAGTTGAGGTTCTTTGTACTTACTTGAAGATCCTCTTTGACACTGCCAATCTTCTGACTGCACCAACAATTCCAACAACCAACACATTCTTCCATGAAGCATGGAAGATTCAATTGGAACTGGCTCGTGCTGCAGCAAGTGAAGATCCATCCATAAGCGGTCTTACCAAAACAATGCAAGAGGAGTTTGATAAATACTGGAAGAGTTGTTGTCTAATATTAGCTATTGCCGTTGTAATGGATCCACGCTTCAAAATGAAACTTGTAGAATTCAGCTTTACAAAAATATATGGTGAAGAAGCTGCCACCTTTGTGAAGTTCGTTGAGGAGGGAATCCACGAGCTCTTCCTTGAATACGTGGCACTTCCTCTGCCTCTGACCCCAGCTTATGCTGAAGAGGTAGATGATGGAGCTTTGAAGCAGGAGAATGGTGGGGGCGGACTTACAGATTTTGATGCCTATATTATGGAGACAACAAGCCAGCAGTCAAGGTCAGAACTTGATCAATATTTGGATGAGTCCTTGTTGCCTCGTGTTCATGAGTTTGACGTTGTTGGGTGGTGGAAACTGAACAGAATGAAGTACCCAACTCTGTCAAAAATGGCTCGTGACATCTTGTCTGTTCCAGTTTCTACTGTAACAGCTGATTCTGTGTTTAGCACGGTAGGCAAAGAGATGGATCGCTACAGGTGTTCCTTGCGACCTGAGACCGTGGAGGCCCTCATTTGCGCCAAGGATTGGCTTCAAAATGCATCAGTAAATACCTTACATGCACCAATAAAAATGGAAGTCCCCATTTAGGTTTTTTCTGTGATGTTAAATACTTGTCTAGAATAGCCTTTGTAGCTGATTTCTGTTTTCTTTGAGACTGTTATAACATTTGTCTCCTCCGTGTCACCCGAGATTCGACTTTCTTGTATCATAATTTGGTATCAGTAGAGACTTACTGGAGAGTTTAGTTGCGATTTTCGATGTCTTTTTTCGTTGATGTCTGAATGCATGAAAGCAGTTTTAATCTGGTGCATGATATGAGTATATGTTTATACAGTTGTATTGCCTATCTATGTTCTATATTGCCTTGCATTATAGAGTTTATTTTCTTGGTATAAAATTGTTATTTTAGCTGCATTTTTTATGT</gDNA_template>
            <first_frame> F  P  L  S  L  F  F  L  S  P  P  A  T  A  E  N  L  D  L  I  H  Y  R  S  L  K  N  S  S  A  S  K  F  L  S  G  F  C  S  E  L  N  F  G  N  W  V  L  L  K  I  Q  N  F  Q  Q  :  P  *  A  S  G  Y  *  W  Q  P  Q  K  P  Q  L  L  Q  Q  P  L  L  R  I  M  R  W  C  R  K  M  R  *  Y  M  S  M  V  M  R  W  C  R  K  M  R :   *  Y  M  S  T  A  M  T  L  C  L  K  M  R  C  K  M  S  T  A  M  R  L  C  R  K  M  R  *  Y  V  S  T  A  M  R  L  C  G  K  M  R  *  Y  L  S  T  I  M  R  *  C  R  K  M  R  *  Y  M  S  A  V  T  R  Q  C  H  K  M  R  W  Y  M  S  I  V  M  K  W  C  Q  I  M  R  *  H  M  S  T  L  T  R  W  C  R  K  M  R  *  H  M  I  I  I  T  R  W  C  R  K  M  R  *  H  M  S  I  I  T  R  W  C  R  K  M  R  *  C  M  N  M  V  M  R  W  C  R  N  M  R  *  C  M  N  I  V  M  R  *  C  R  N  M  R  *  C  M  N  I  I  W  C  L  G  M  R  *  S  L  A  M  R  W  S  R  M  M  R  *  S  H  *  M  R  W  S  L  L  N  H  N  P  T  I  *  K  H  L  Q  T  I  Q  K  H  S  P  A  S  V  G  R  R  S  Q  *  F  G  N  T  S  P  L  K  M  S  A  V  E  L  E  G  H  N  V  S  S  A  S  N  H  L  H  I  V  Q  V  Q  K  *  L  A  L  V  T  *  N  A  I  L  Q  K  E  P  V  Q  L  S  Y  V  T  N  R  I  I  N  *  A  H  I  V  H  L  L  R  *  V  D  M  V  V  V  L  M  H  Q  N  G  V  I  G  L  H  L  L  L  T  L  L  L  I  L  T  G  A  V  K  R  S  L  R  *  S  S  C  T  T  I  P  F  T  W  L  S  I  Q  A  F  L  L  L  C  R  I  F  N  L  V  L  I  W  *  A  S  T  L  C  K  E  I  V  W  Q  L  I  L  E  R  S  K  P  F  R  R  S  L  R  E  C  L  G  V  S  A  *  R  *  I  C  G  P  P  A  T  L  W  A  M  C  S  *  P  G  S  I  L  T  V  S  G  K  F  T  G  K  Y  S  I  S  L  W  N  H  I  Q  I  L  T  R  L  S  A  M  L  L  L  L  A  F  L  T  G  V  W  K  V  S  C  F  L  S  L  L  I  N  R  W  V  M  L  L  L  I  I  L  E  L  Y  Y  L  *  R  T  L  L  C  S  T  V  S  C  W  S  E  V  V  L  L  E  L  *  A  A  L  P  K  V  H  L  I  F  C  M  K  L  L  R  K  *  E  I  A  S  S  T  *  K  H  Q  N  F  T  R  K  S  L  L  S  S  N  S  S  F  K  C  Q  A  Q  R  L  W  L  L  M  T  R  L  N  G  T  P  H  M  R  C  C  *  L  H  Q  S  *  R  K  C  F  H  A  W  I  H  L  I  P  I  T  R  M  P  C  Q  W  M  I  G  S  K  L  R  F  F  V  L  T  *  R  S  S  L  T  L  P  I  F  *  L  H  Q  Q  F  Q  Q  P  T  H  S  S  M  K  H  G  R  F  N  W  N  W  L  V  L  Q  Q  V  K  I  H  P  *  A  V  L  P  K  Q  C  K  R  S  L  I  N  T  G  R  V  V  V  *  Y  *  L  L  P  L  *  W  I  H  A  S  K  *  N  L  *  N  S  A  L  Q  K  Y  M  V  K  K  L  P  P  L  *  S  S  L  R  R  E  S  T  S  S  S  L  N  T  W  H  F  L  C  L  *  P  Q  L  M  L  K  R  *  M  M  E  L  *  S  R  R  M  V  G  A  D  L  Q  I  L  M  P  I  L  W  R  Q  Q  A  S  S  Q  G  Q  N  L  I  N  I  W  M  S  P  C  C  L  V  F  M  S  L  T  L  L  G  G  G  N  *  T  E  *  S  T  Q  L  C  Q  K  W  L  V  T  S  C  L  F  Q  F  L  L  *  Q  L  I  L  C  L  A  R  *  A  K  R  W  I  A  T  G  V  P  C  D  L  R  P  W  R  P  S  F  A  P  R  I  G  F  K  M  H  Q  *  I  P  Y  M  H  Q  *  K  W  K  S  P  F  R  F  F  L  *  C  *  I  L  V  *  N  S  L  C  S  *  F  L  F  S  L  R  L  L  *  H  L  S  P  P  C  H  P  R  F  D  F  L  V  S  *  F  G  I  S  R  D  L  L  E  S  L  V  A  I  F  D  V  F  F  R  *  C  L  N  A  *  K  Q  F  *  S  G  A  *  Y  E  Y  M  F  I  Q  L  Y  C  L  S  M  F  Y  I  A  L  H  Y  R  V  Y  F  L  G  I  K  L  L  F  *  L  H  F  L  C </first_frame>
            <second_frame>  F  L  S  L  S  S  F  S  L  L  Q  L  R  P  K  T  *  I  *  F  T  T  G  A  *  K  T  R  R  L  R  N  S  Y  L  G  F  A  Q  N  *  I  S  V  I  G  F  F  S  K  F  K  I  S  N  S :   L  E  L  L  D  I  D  G  N  P  R  N  R  S  S  S  S  N  P  Y  *  E  *  *  D  G  A  E  K  *  D  D  T  *  A  W  *  *  D  G  A  A  K  *   : D  D  T  *  A  Q  P  *  H  C  A  *  K  *  D  A  K  *  A  Q  P  *  D  Y  A  G  K  *  D  D  T  *  A  Q  P  *  D  C  A  G  K  *  D  D  T  *  A  Q  S  *  D  S  A  G  K  *  D  D  T  *  V  Q  S  R  D  S  A  T  K  *  D  G  T  *  A  *  S  *  N  G  A  R  *  *  D  D  T  *  A  H  S  R  D  G  A  G  K  *  D  D  T  *  S  *  S  R  D  G  A  G  K  *  D  D  T  *  A  *  S  R  D  G  A  G  K  *  D  D  A  *  T  W  S  *  D  G  A  G  T  *  D  D  A  *  T  *  S  *  D  D  A  G  T  *  D  D  A  *  T  S  Y  G  A  W  A  *  D  S  P  *  Q  *  D  G  P  G  *  *  D  D  P  T  K  *  D  G  P  C  *  T  T  T  Q  L  Y  R  N  T  S  K  Q  S  R  N  T  A  Q  Q  A  *  E  E  E  V  N  S  L  G  T  L  H  H  *  K  C  R  R  W  N  *  K  G  T  M  *  A  V  Q  A  I  I  C  I  *  Y  R  F  K  S  S  W  H  *  S  P  E  T  P  Y  C  K  R  N  L  S  S  C  P  T  *  P  T  E  *  S  I  E  P  I  *  Y  T  S  *  D  E  W  I  W  W  *  Y  *  C  T  K  T  A  L  *  D  C  I  F  S  L  P  C  F  *  S  *  P  V  P  S  R  D  L  *  D  D  H  H  A  R  L  S  P  S  H  G  *  A  S  R  L  S  C  F  C  A  E  S  S  T  S  F  *  Y  G  E  L  Q  H  C  A  R  R  L  C  G  N  L  S  *  R  E  A  S  H  S  E  G  H  *  G  S  A  W  A  Y  L  L  N  A  R  Y  V  V  L  L  L  H  C  G  L  C  V  H  N  R  A  V  Y  *  Q  *  V  E  N  S  Q  E  N  T  Q  Y  H  Y  G  T  I  S  R  F  *  H  G  F  Q  P  C  C  C  C  L  P  F  *  L  E  Y  G  R  *  V  V  F  C  H  Y  *  S  T  V  G  *  C  F  C  *  *  S  *  S  F  T  I  C  E  E  P  S  C  A  Q  R  S  V  V  G  R  K  L  S  C  S  N  F  K  Q  H  C  P  R  C  I  *  F  F  A  *  N  C  *  E  S  K  R  *  R  Q  V  R  E  N  I  R  I  S  R  G  K  V  Y  *  A  Q  T  A  A  S  S  A  K  H  K  D  F  G  S  *  *  P  D  S  M  E  H  H  I  *  D  V  V  S  C  I  R  V  K  G  S  V  F  M  L  G  Y  I  *  S  R  L  Q  G  C  P  V  N  G  *  L  E  A  S  *  G  S  L  Y  L  L  E  D  P  L  *  H  C  Q  S  S  D  C  T  N  N  S  N  N  Q  H  I  L  P  *  S  M  E  D  S  I  G  T  G  S  C  C  S  K  *  R  S  I  H  K  R  S  Y  Q  N  N  A  R  G  V  *  *  I  L  E  E  L  L  S  N  I  S  Y  C  R  C  N  G  S  T  L  Q  N  E  T  C  R  I  Q  L  Y  K  N  I  W  *  R  S  C  H  L  C  E  V  R  *  G  G  N  P  R  A  L  P  *  I  R  G  T  S  S  A  S  D  P  S  L  C  *  R  G  R  *  W  S  F  E  A  G  E  W  W  G  R  T  Y  R  F  *  C  L  Y  Y  G  D  N  K  P  A  V  K  V  R  T  *  S  I  F  G  *  V  L  V  A  S  C  S  *  V  *  R  C  W  V  V  E  T  E  Q  N  E  V  P  N  S  V  K  N  G  S  *  H  L  V  C  S  S  F  Y  C  N  S  *  F  C  V  *  H  G  R  Q  R  D  G  S  L  Q  V  F  L  A  T  *  D  R  G  G  P  H  L  R  Q  G  L  A  S  K  C  I  S  K  Y  L  T  C  T  N  K  N  G  S  P  H  L  G  F  F  C  D  V  K  Y  L  S  R  I  A  F  V  A  D  F  C  F  L  *  D  C  Y  N  I  C  L  L  R  V  T  R  D  S  T  F  L  Y  H  N  L  V  S  V  E  T  Y  W  R  V  *  L  R  F  S  M  S  F  F  V  D  V  *  M  H  E  S  S  F  N  L  V  H  D  M  S  I  C  L  Y  S  C  I  A  Y  L  C  S  I  L  P  C  I  I  E  F  I  F  L  V  *  N  C  Y  F  S  C  I  F  Y   </second_frame>
            <third_frame>   S  S  L  S  L  L  S  L  S  S  S  Y  G  R  K  P  R  S  D  S  L  P  E  P  E  K  L  V  G  F  E  I  P  I  W  V  L  L  R  I  E  F  R  *  L  G  S  S  Q  N  S  K  F  P  T   : A  L  S  F  W  I  L  M  A  T  P  E  T  A  A  P  P  A  T  P  T  E  N  N  E  M  V  P  K  N  E  M  I  H  E  H  G  D  E  M  V  P  Q  N  E  :  M  I  H  E  H  S  H  D  I  V  P  E  N  E  M  Q  N  E  H  S  H  E  I  M  P  E  N  E  M  I  R  E  H  S  H  E  I  V  R  E  N  E  M  I  P  E  H  N  H  E  I  V  P  E  N  E  M  I  H  E  C  S  H  E  T  V  P  Q  N  E  M  V  H  E  H  S  H  E  M  V  P  D  N  E  M  T  H  E  H  T  H  E  M  V  P  E  N  E  M  T  H  D  H  N  H  E  M  V  Q  E  N  E  M  T  H  E  H  N  H  E  M  V  P  E  N  E  M  M  H  E  H  G  H  E  M  V  P  E  H  E  M  M  H  E  H  S  H  E  M  M  P  E  H  E  M  M  H  E  H  H  M  V  L  G  H  E  I  V  P  S  N  E  M  V  P  D  D  E  M  I  P  L  N  E  M  V  L  A  E  P  Q  P  N  Y  I  E  T  P  P  N  N  P  E  T  Q  P  S  K  R  R  K  K  K  S  I  V  W  E  H  F  T  I  E  N  V  G  G  G  T  R  R  A  Q  C  K  Q  C  K  Q  S  F  A  Y  S  T  G  S  K  V  A  G  T  S  H  L  K  R  H  I  A  K  G  T  C  P  V  V  L  R  N  Q  Q  N  N  Q  L  S  P  Y  S  T  P  P  K  M  S  G  Y  G  G  S  T  D  A  P  K  R  R  Y  R  T  A  S  S  P  Y  L  A  F  D  P  D  R  C  R  Q  E  I  S  K  M  I  I  M  H  D  Y  P  L  H  M  V  E  H  P  G  F  L  A  F  V  Q  N  L  Q  P  R  F  D  M  V  S  F  N  T  V  Q  G  D  C  V  A  T  Y  L  R  E  K  Q  A  I  Q  K  V  I  E  G  V  P  G  R  I  C  L  T  L  D  M  W  S  S  C  Y  T  V  G  Y  V  F  I  T  G  Q  Y  I  D  S  E  W  K  I  H  R  K  I  L  N  I  I  M  E  P  Y  P  D  S  D  T  A  F  S  H  A  V  A  A  C  L  S  D  W  S  M  E  G  K  L  F  S  V  T  I  N  Q  P  L  G  D  A  S  V  D  N  L  R  A  L  L  S  V  K  N  P  L  V  L  N  G  Q  L  L  V  G  S  C  L  A  R  T  L  S  S  I  A  Q  G  A  F  N  F  L  H  E  T  V  K  K  V  R  D  S  V  K  Y  V  K  T  S  E  F  H  E  E  K  F  I  E  L  K  Q  Q  L  Q  V  P  S  T  K  T  L  A  L  D  D  Q  T  Q  W  N  T  T  Y  E  M  L  L  A  A  S  E  L  K  E  V  F  S  C  L  D  T  S  D  P  D  Y  K  D  A  L  S  M  D  D  W  K  Q  V  E  V  L  C  T  Y  L  K  I  L  F  D  T  A  N  L  L  T  A  P  T  I  P  T  T  N  T  F  F  H  E  A  W  K  I  Q  L  E  L  A  R  A  A  A  S  E  D  P  S  I  S  G  L  T  K  T  M  Q  E  E  F  D  K  Y  W  K  S  C  C  L  I  L  A  I  A  V  V  M  D  P  R  F  K  M  K  L  V  E  F  S  F  T  K  I  Y  G  E  E  A  A  T  F  V  K  F  V  E  E  G  I  H  E  L  F  L  E  Y  V  A  L  P  L  P  L  T  P  A  Y  A  E  E  V  D  D  G  A  L  K  Q  E  N  G  G  G  G  L  T  D  F  D  A  Y  I  M  E  T  T  S  Q  Q  S  R  S  E  L  D  Q  Y  L  D  E  S  L  L  P  R  V  H  E  F  D  V  V  G  W  W  K  L  N  R  M  K  Y  P  T  L  S  K  M  A  R  D  I  L  S  V  P  V  S  T  V  T  A  D  S  V  F  S  T  V  G  K  E  M  D  R  Y  R  C  S  L  R  P  E  T  V  E  A  L  I  C  A  K  D  W  L  Q  N  A  S  V  N  T  L  H  A  P  I  K  M  E  V  P  I  *  V  F  S  V  M  L  N  T  C  L  E  *  P  L  *  L  I  S  V  F  F  E  T  V  I  T  F  V  S  S  V  S  P  E  I  R  L  S  C  I  I  I  W  Y  Q  *  R  L  T  G  E  F  S  C  D  F  R  C  L  F  S  L  M  S  E  C  M  K  A  V  L  I  W  C  M  I  *  V  Y  V  Y  T  V  V  L  P  I  Y  V  L  Y  C  L  A  L  *  S  L  F  S  W  Y  K  I  V  I  L  A  A  F  F  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23548" stop="23515"/>
                    <exon start="21623" stop="21490"/>
                    <exon start="21351" stop="18796"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2721</number_coding_nucleotides>
                  <number_encoded_amino_acids>907</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGSSQNSKFPTALSFWILMATPETAAPPATPTENNEMVPKNEMIHEHGDEMVPQNEMIHEHSHDIVPENEMQNEHSHEIMPENEMIREHSHEIVRENEMIPEHNHEIVPENEMIHECSHETVPQNEMVHEHSHEMVPDNEMTHEHTHEMVPENEMTHDHNHEMVQENEMTHEHNHEMVPENEMMHEHGHEMVPEHEMMHEHSHEMMPEHEMMHEHHMVLGHEIVPSNEMVPDDEMIPLNEMVLAEPQPNYIETPPNNPETQPSKRRKKKSIVWEHFTIENVGGGTRRAQCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPVVLRNQQNNQLSPYSTPPKMSGYGGSTDAPKRRYRTASSPYLAFDPDRCRQEISKMIIMHDYPLHMVEHPGFLAFVQNLQPRFDMVSFNTVQGDCVATYLREKQAIQKVIEGVPGRICLTLDMWSSCYTVGYVFITGQYIDSEWKIHRKILNIIMEPYPDSDTAFSHAVAACLSDWSMEGKLFSVTINQPLGDASVDNLRALLSVKNPLVLNGQLLVGSCLARTLSSIAQGAFNFLHETVKKVRDSVKYVKTSEFHEEKFIELKQQLQVPSTKTLALDDQTQWNTTYEMLLAASELKEVFSCLDTSDPDYKDALSMDDWKQVEVLCTYLKILFDTANLLTAPTIPTTNTFFHEAWKIQLELARAAASEDPSISGLTKTMQEEFDKYWKSCCLILAIAVVMDPRFKMKLVEFSFTKIYGEEAATFVKFVEEGIHELFLEYVALPLPLTPAYAEEVDDGALKQENGGGGLTDFDAYIMETTSQQSRSELDQYLDESLLPRVHEFDVVGWWKLNRMKYPTLSKMARDILSVPVSTVTADSVFSTVGKEMDRYRCSLRPETVEALICAKDWLQNASVNTLHAPIKMEVPI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="23693" e_stop="23515"/>
            <exon e_start="21623" e_stop="21490"/>
            <exon e_start="20889" e_stop="20237"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.999" e_score="0.994"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.993"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="23693" e_stop="23515" e_length="179"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23514" i_stop="21624" i_length="1891"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="21623" e_stop="21490" e_length="134"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="21489" i_stop="20890" i_length="600"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="20889" e_stop="20237" e_length="653"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23693" stop="23515"/>
              <exon start="21623" stop="21490"/>
              <exon start="20889" stop="20307"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="20660" stop="20237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E442296" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCCAATTCTCTTTTCCTCTCTCTCTCTTCTTTCTCTCTCCTCCAGCTACGGCCGAAAACCTAGATCTGATTCACTACCGGAGCCTGAAAAACTCGTCGGCTTCGAAATTCCTATCTGGGTTTTGCTCAGAATTGAATTTCGGTAATTGGGTTCTTCTCAAAATTCAAAATTTCCAACAG : CCTTGAGCTTCTGGATATTGATGGCAACCCCAGAAACCGCAGCTCCTCCAGCAACCCCTACTGAGAATAATGAGATGGTGCCGAAAAATGAGATGATACATGAGCATGGTGATGAGATGGTGCCGCAAAATGAG : ATGATGCATGAACATCATATGGTGCTTGGGCATGAGATAGTCCCTAGCAATGAGATGGTCCCGGATGATGAGATGATCCCACTAAATGAGATGGTCCTTGCTGAACCACAACCCAACTATATAGAAACACCTCCAAACAATCCAGAAACACAGCCCAGCAAGCGTAGGAAGAAGAAGTCAATAGTTTGGGAACACTTCACCATTGAAAATGTCGGCGGTGGAACTAGAAGGGCACAATGTAAGCAGTGCAAGCAATCATTTGCATATAGTACAGGTTCAAAAGTAGCTGGCACTAGTCACCTGAAACGCCATATTGCAAAAGGAACCTGTCCAGTTGTCCTACGTAACCAACAGAATAATCAATTGAGCCCATATAGTACACCTCCTAAGATGAGTGGATATGGTGGTAGTACTGATGCACCAAAACGGCGTTATAGGACTGCATCTTCTCCTTACCTTGCTTTTGATCCTGACCGGTGCCGTCAAGAGATCTCTAAGATGATCATCATGCACGACTATCCCCTTCACATGGTTGAGCATCCAGGCTTTCTTGCTTTTGTGCAGAATCTTCAACCTCGTTTTGATATGGTGAGCTTCAACACTGTGCAAGGAGATTGTGTGGCAACTTATCTTAGAGAGAAGCAAGCCATTCA</gDNA_template>
            <first_frame> P  N  S  L  F  L  S  L  S  S  F  S  L  L  Q  L  R  P  K  T  *  I  *  F  T  T  G  A  *  K  T  R  R  L  R  N  S  Y  L  G  F  A  Q  N  *  I  S  V  I  G  F  F  S  K  F  K  I  S  N  S :   L  E  L  L  D  I  D  G  N  P  R  N  R  S  S  S  S  N  P  Y  *  E  *  *  D  G  A  E  K  *  D  D  T  *  A  W  *  *  D  G  A  A  K  *   : D  D  A  *  T  S  Y  G  A  W  A  *  D  S  P  *  Q  *  D  G  P  G  *  *  D  D  P  T  K  *  D  G  P  C  *  T  T  T  Q  L  Y  R  N  T  S  K  Q  S  R  N  T  A  Q  Q  A  *  E  E  E  V  N  S  L  G  T  L  H  H  *  K  C  R  R  W  N  *  K  G  T  M  *  A  V  Q  A  I  I  C  I  *  Y  R  F  K  S  S  W  H  *  S  P  E  T  P  Y  C  K  R  N  L  S  S  C  P  T  *  P  T  E  *  S  I  E  P  I  *  Y  T  S  *  D  E  W  I  W  W  *  Y  *  C  T  K  T  A  L  *  D  C  I  F  S  L  P  C  F  *  S  *  P  V  P  S  R  D  L  *  D  D  H  H  A  R  L  S  P  S  H  G  *  A  S  R  L  S  C  F  C  A  E  S  S  T  S  F  *  Y  G  E  L  Q  H  C  A  R  R  L  C  G  N  L  S  *  R  E  A  S  H  S </first_frame>
            <second_frame>  P  I  L  F  S  S  L  S  L  L  S  L  S  S  S  Y  G  R  K  P  R  S  D  S  L  P  E  P  E  K  L  V  G  F  E  I  P  I  W  V  L  L  R  I  E  F  R  *  L  G  S  S  Q  N  S  K  F  P  T   : A  L  S  F  W  I  L  M  A  T  P  E  T  A  A  P  P  A  T  P  T  E  N  N  E  M  V  P  K  N  E  M  I  H  E  H  G  D  E  M  V  P  Q  N  E  :  M  M  H  E  H  H  M  V  L  G  H  E  I  V  P  S  N  E  M  V  P  D  D  E  M  I  P  L  N  E  M  V  L  A  E  P  Q  P  N  Y  I  E  T  P  P  N  N  P  E  T  Q  P  S  K  R  R  K  K  K  S  I  V  W  E  H  F  T  I  E  N  V  G  G  G  T  R  R  A  Q  C  K  Q  C  K  Q  S  F  A  Y  S  T  G  S  K  V  A  G  T  S  H  L  K  R  H  I  A  K  G  T  C  P  V  V  L  R  N  Q  Q  N  N  Q  L  S  P  Y  S  T  P  P  K  M  S  G  Y  G  G  S  T  D  A  P  K  R  R  Y  R  T  A  S  S  P  Y  L  A  F  D  P  D  R  C  R  Q  E  I  S  K  M  I  I  M  H  D  Y  P  L  H  M  V  E  H  P  G  F  L  A  F  V  Q  N  L  Q  P  R  F  D  M  V  S  F  N  T  V  Q  G  D  C  V  A  T  Y  L  R  E  K  Q  A  I   </second_frame>
            <third_frame>   Q  F  S  F  P  L  S  L  F  F  L  S  P  P  A  T  A  E  N  L  D  L  I  H  Y  R  S  L  K  N  S  S  A  S  K  F  L  S  G  F  C  S  E  L  N  F  G  N  W  V  L  L  K  I  Q  N  F  Q  Q  :  P  *  A  S  G  Y  *  W  Q  P  Q  K  P  Q  L  L  Q  Q  P  L  L  R  I  M  R  W  C  R  K  M  R  *  Y  M  S  M  V  M  R  W  C  R  K  M  R :   *  C  M  N  I  I  W  C  L  G  M  R  *  S  L  A  M  R  W  S  R  M  M  R  *  S  H  *  M  R  W  S  L  L  N  H  N  P  T  I  *  K  H  L  Q  T  I  Q  K  H  S  P  A  S  V  G  R  R  S  Q  *  F  G  N  T  S  P  L  K  M  S  A  V  E  L  E  G  H  N  V  S  S  A  S  N  H  L  H  I  V  Q  V  Q  K  *  L  A  L  V  T  *  N  A  I  L  Q  K  E  P  V  Q  L  S  Y  V  T  N  R  I  I  N  *  A  H  I  V  H  L  L  R  *  V  D  M  V  V  V  L  M  H  Q  N  G  V  I  G  L  H  L  L  L  T  L  L  L  I  L  T  G  A  V  K  R  S  L  R  *  S  S  C  T  T  I  P  F  T  W  L  S  I  Q  A  F  L  L  L  C  R  I  F  N  L  V  L  I  W  *  A  S  T  L  C  K  E  I  V  W  Q  L  I  L  E  R  S  K  P  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23548" stop="23515"/>
                    <exon start="21623" stop="21490"/>
                    <exon start="20889" stop="20239"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>819</number_coding_nucleotides>
                  <number_encoded_amino_acids>273</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGSSQNSKFPTALSFWILMATPETAAPPATPTENNEMVPKNEMIHEHGDEMVPQNEMMHEHHMVLGHEIVPSNEMVPDDEMIPLNEMVLAEPQPNYIETPPNNPETQPSKRRKKKSIVWEHFTIENVGGGTRRAQCKQCKQSFAYSTGSKVAGTSHLKRHIAKGTCPVVLRNQQNNQLSPYSTPPKMSGYGGSTDAPKRRYRTASSPYLAFDPDRCRQEISKMIIMHDYPLHMVEHPGFLAFVQNLQPRFDMVSFNTVQGDCVATYLREKQAI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="28793" PGL_stop="28347"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28793" e_stop="28347"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.928"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="28793" e_stop="28347" e_length="447"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28793" stop="28347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205772" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28793" stop="28381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205773" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAAAGTGTTCGTGTTGGATTTTATTTGCCCTGATTTCTTACCATAAATAGGTTTTCCTCTTAGGAAAAGATTTTGAATTGACTAATCCTTTTTTGGTAGGAAAAGGTTTAGGACTCTATAAATAGAGGCATGTTCCTTCTAACTTAATCAGCATTCACAATGTAGTCTTAAGGGCTTTGAGAGTTTTGGTTAGGGGAGAATTTATGGGTCACAAGCTTGATACGTTATTGCTTGTGTGAACCTCCCATGTATTCTGAGTGAATTGGTTGAGGTTGTTTCCCTCTGTATTTTGTACTCTCATATTTATAGTGGATTGCTCATCTCCTTTGTGGACGTAGGTCGATTGACCGAACCACGTTAAATCTTTGTGTCTTTTGGTATATTTCTCGTTGTCTTCTTACTCATGGTCTTTCGAGATTTGCGTTGCTAGCTTTCGCGTTTACACC</gDNA_template>
            <first_frame> L  K  C  S  C  W  I  L  F  A  L  I  S  Y  H  K  *  V  F  L  L  G  K  D  F  E  L  T  N  P  F  L  V  G  K  G  L  G  L  Y  K  *  R  H  V  P  S  N  L  I  S  I  H  N  V  V  L  R  A  L  R  V  L  V  R  G  E  F  M  G  H  K  L  D  T  L  L  L  V  *  T  S  H  V  F  *  V  N  W  L  R  L  F  P  S  V  F  C  T  L  I  F  I  V  D  C  S  S  P  L  W  T  *  V  D  *  P  N  H  V  K  S  L  C  L  L  V  Y  F  S  L  S  S  Y  S  W  S  F  E  I  C  V  A  S  F  R  V  Y  T </first_frame>
            <second_frame>  *  S  V  R  V  G  F  Y  L  P  *  F  L  T  I  N  R  F  S  S  *  E  K  I  L  N  *  L  I  L  F  W  *  E  K  V  *  D  S  I  N  R  G  M  F  L  L  T  *  S  A  F  T  M  *  S  *  G  L  *  E  F  W  L  G  E  N  L  W  V  T  S  L  I  R  Y  C  L  C  E  P  P  M  Y  S  E  *  I  G  *  G  C  F  P  L  Y  F  V  L  S  Y  L  *  W  I  A  H  L  L  C  G  R  R  S  I  D  R  T  T  L  N  L  C  V  F  W  Y  I  S  R  C  L  L  T  H  G  L  S  R  F  A  L  L  A  F  A  F  T   </second_frame>
            <third_frame>   K  V  F  V  L  D  F  I  C  P  D  F  L  P  *  I  G  F  P  L  R  K  R  F  *  I  D  *  S  F  F  G  R  K  R  F  R  T  L  *  I  E  A  C  S  F  *  L  N  Q  H  S  Q  C  S  L  K  G  F  E  S  F  G  *  G  R  I  Y  G  S  Q  A  *  Y  V  I  A  C  V  N  L  P  C  I  L  S  E  L  V  E  V  V  S  L  C  I  L  Y  S  H  I  Y  S  G  L  L  I  S  F  V  D  V  G  R  L  T  E  P  R  *  I  F  V  S  F  G  I  F  L  V  V  F  L  L  M  V  F  R  D  L  R  C  *  L  S  R  L  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0211M21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="40239" PGL_stop="39845"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40239" e_stop="39845"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="40239" e_stop="39845" e_length="395"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40239" stop="39845"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40186" stop="39859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258205" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTGCTGAAAATGGCTATAAAGGAAGTCAATTTTTGATTTTTTAATAACTGAAAAAAAAAATTTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATTTTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAACAAGTACATTCATTGTT</gDNA_template>
            <first_frame> L  A  E  N  G  Y  K  G  S  Q  F  L  I  F  *  *  L  K  K  K  I  S  L  H  L  F  F  S  Q  I  K  S  K  C  R  S  T  E  S  V  *  L  V  V  V  L  Q  F  V  E  V  K  E  V  *  G  T  A  I  S  L  T  G  L  I  R  F  I  L  G  E  I  N  P  *  P  W  V  Q  *  G  D  *  I  S  *  G  H  T  V  V  S  V  D  S  D  *  F  F  Y  F  K  F  F  L  L  H  L  V  S  V  S  V  H  *  L  H  K  Y  K  L  L  *  E  *  Q  Q  V  H  S  L   </first_frame>
            <second_frame>  L  L  K  M  A  I  K  E  V  N  F  *  F  F  N  N  *  K  K  K  F  L  C  I  Y  F  S  L  K  *  N  Q  S  V  D  R  L  S  L  C  D  L  L  L  F  F  S  S  L  K  L  K  K  F  E  V  P  L  F  L  *  Q  V  *  S  V  L  S  W  E  K  L  I  H  N  L  G  Y  S  E  G  I  K  F  L  K  D  T  Q  *  F  L  W  T  R  I  N  S  S  I  L  N  F  F  C  F  I  L  F  L  F  L  F  I  N  F  I  N  T  S  Y  C  K  N  N  N  K  Y  I  H  C  </second_frame>
            <third_frame>   C  *  K  W  L  *  R  K  S  I  F  D  F  L  I  T  E  K  K  N  F  S  A  F  I  F  L  S  N  K  I  K  V  S  I  D  *  V  C  V  T  C  C  C  S  S  V  R  *  S  *  R  S  L  R  Y  R  Y  F  F  N  R  F  N  P  F  Y  L  G  R  N  *  S  I  T  L  G  T  V  R  G  L  N  F  L  R  T  H  S  S  F  C  G  L  G  L  I  L  L  F  *  I  F  S  A  S  S  C  F  C  F  C  S  L  T  S  *  I  Q  V  I  V  R  I  T  T  S  T  F  I  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0211M21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="43613" PGL_stop="44229"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="43613" e_stop="44229"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.908"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.908">
            <gDNA_exon_boundary e_start="43613" e_stop="44229" e_length="617"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43613" stop="44229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419244" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTTTCTTTAATTTTGTGGAATCTTCTTCCACAAAATTTACTCCAGATATTGCTGAATTATCACGTGACCTCTTTTCTGCAGCCTTATTATCCTCTTCGATTCTCAACCTTAGTATGAGATCTTCAACAGTCATCTCATTGCGTTTGTGTTTCAAGTAGTTTTTAAAGTCCTTCCACAATGGAGGTAACTTTTCAATAATTGCAGCCACTTGAAAAGCATCATTCATAATTAATCCTTCAGCAAGGAGATCATGTATTATGACCTGCAATTCTTGAACTTGGGTGACGACAGTCTTACTGTCTATCATCTTAAAGTCCAGAAATTTTGCCACAATGAATTTCTTCATTCCGGCATCTTCTGTTTTGTACTTCTTTTCTAAAGCATCCCAGAGTTCTTTTGAGGTTTTTGCATTGTTGTACACATTGTACAGATCATCTTGTAGACCACTCAAAATATAATTTTTACACAAAAAATCTGAGTGTGTCCATGCTTCTGTTACCAATAATCGTTCATCAGCCAAAGTTTCATCTGACATAACAGGAACATTCTCTTTGATGAACTTCTGCAGACTCAACATAGTGAGATAGAAGAACATCTTTTGCTACCATCTCTTAA</gDNA_template>
            <first_frame> S  F  L  *  F  C  G  I  F  F  H  K  I  Y  S  R  Y  C  *  I  I  T  *  P  L  F  C  S  L  I  I  L  F  D  S  Q  P  *  Y  E  I  F  N  S  H  L  I  A  F  V  F  Q  V  V  F  K  V  L  P  Q  W  R  *  L  F  N  N  C  S  H  L  K  S  I  I  H  N  *  S  F  S  K  E  I  M  Y  Y  D  L  Q  F  L  N  L  G  D  D  S  L  T  V  Y  H  L  K  V  Q  K  F  C  H  N  E  F  L  H  S  G  I  F  C  F  V  L  L  F  *  S  I  P  E  F  F  *  G  F  C  I  V  V  H  I  V  Q  I  I  L  *  T  T  Q  N  I  I  F  T  Q  K  I  *  V  C  P  C  F  C  Y  Q  *  S  F  I  S  Q  S  F  I  *  H  N  R  N  I  L  F  D  E  L  L  Q  T  Q  H  S  E  I  E  E  H  L  L  L  P  S  L   </first_frame>
            <second_frame>  L  F  F  N  F  V  E  S  S  S  T  K  F  T  P  D  I  A  E  L  S  R  D  L  F  S  A  A  L  L  S  S  S  I  L  N  L  S  M  R  S  S  T  V  I  S  L  R  L  C  F  K  *  F  L  K  S  F  H  N  G  G  N  F  S  I  I  A  A  T  *  K  A  S  F  I  I  N  P  S  A  R  R  S  C  I  M  T  C  N  S  *  T  W  V  T  T  V  L  L  S  I  I  L  K  S  R  N  F  A  T  M  N  F  F  I  P  A  S  S  V  L  Y  F  F  S  K  A  S  Q  S  S  F  E  V  F  A  L  L  Y  T  L  Y  R  S  S  C  R  P  L  K  I  *  F  L  H  K  K  S  E  C  V  H  A  S  V  T  N  N  R  S  S  A  K  V  S  S  D  I  T  G  T  F  S  L  M  N  F  C  R  L  N  I  V  R  *  K  N  I  F  C  Y  H  L  L  </second_frame>
            <third_frame>   F  S  L  I  L  W  N  L  L  P  Q  N  L  L  Q  I  L  L  N  Y  H  V  T  S  F  L  Q  P  Y  Y  P  L  R  F  S  T  L  V  *  D  L  Q  Q  S  S  H  C  V  C  V  S  S  S  F  *  S  P  S  T  M  E  V  T  F  Q  *  L  Q  P  L  E  K  H  H  S  *  L  I  L  Q  Q  G  D  H  V  L  *  P  A  I  L  E  L  G  *  R  Q  S  Y  C  L  S  S  *  S  P  E  I  L  P  Q  *  I  S  S  F  R  H  L  L  F  C  T  S  F  L  K  H  P  R  V  L  L  R  F  L  H  C  C  T  H  C  T  D  H  L  V  D  H  S  K  Y  N  F  Y  T  K  N  L  S  V  S  M  L  L  L  P  I  I  V  H  Q  P  K  F  H  L  T  *  Q  E  H  S  L  *  *  T  S  A  D  S  T  *  *  D  R  R  T  S  F  A  T  I  S  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43951" stop="44151"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISSFRHLLFCTSFLKHPRVLLRFLHCCTHCTDHLVDHSKYNFYTKNLSVSMLLLPIIVHQPKFHLT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="44982" PGL_stop="43737"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44964" e_stop="43737"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.965"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.965">
            <gDNA_exon_boundary e_start="44964" e_stop="43737" e_length="1228"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44964" stop="44354"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44964" stop="44383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44964" stop="44446"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44964" stop="44738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261310" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44933" stop="44338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44932" stop="44274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44833" stop="44121"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44793" stop="44082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44792" stop="44152"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44676" stop="44060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253427" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44676" stop="44482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375521" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44558" stop="43827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44558" stop="44114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44524" stop="43752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44344" stop="43737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251204" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTTTGTTTATTAACTTTATAAATACAAGTTGTTGTAAGAATAACAATCTTAAGAAATTTAACAGTTTCTGTATTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAACCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTACAAGATGATCTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATACATGATCTCCTTGCTGAAGGATTAATTATGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAATGAGATGACTGTTGA</gDNA_template>
            <first_frame> R  H  V  P  C  *  K  W  L  *  K  E  V  N  F  *  F  F  N  H  *  K  F  F  T  L  C  I  Y  F  S  L  K  *  N  Q  S  V  D  R  L  S  L  C  D  L  L  L  F  L  S  S  L  K  L  K  K  F  E  V  P  L  F  L  *  Q  V  *  S  V  L  S  W  E  K  L  I  H  N  L  G  Y  S  E  G  I  K  F  L  K  D  T  Q  *  F  L  W  T  R  I  N  S  C  I  L  Y  Y  F  L  L  H  L  I  S  V  S  V  F  V  Y  *  L  Y  K  Y  K  L  L  *  E  *  Q  S  *  E  I  *  Q  F  L  Y  L  R  F  L  E  I  K  T  F  M  V  F  Y  S  A  *  I  F  K  I  H  S  I  N  D  *  K  N  I  K  T  L  S  L  N  Q  K  Q  F  V  *  R  F  V  L  Y  C  *  Y  F  K  Y  L  I  Y  L  P  F  V  T  E  K  K  R  L  I  Q  V  K  Q  M  L  E  Q  *  V  L  Q  Q  Q  R  L  H  I  I  V  Q  M  L  P  *  H  W  L  R  N  L  Q  S  F  L  E  S  T  L  R  D  G  S  K  R  C  S  S  I  S  L  C  *  V  C  R  S  S  S  K  R  M  F  L  L  C  Q  M  K  L  W  L  M  N  D  Y  W  *  Q  K  H  G  H  T  Q  I  F  C  V  K  I  I  F  *  V  V  Y  K  M  I  C  T  M  C  T  T  M  Q  K  P  Q  K  N  S  G  M  L  *  K  R  S  T  K  Q  K  M  P  E  *  R  N  S  L  W  Q  N  F  W  T  L  R  *  *  T  V  R  L  S  S  P  K  F  K  N  C  R  S  *  Y  M  I  S  L  L  K  D  *  L  *  M  M  L  F  K  W  L  Q  L  L  K  S  Y  L  H  C  G  R  T  L  K  T  T  *  N  T  N  A  M  R  *  L  L  </first_frame>
            <second_frame>  D  M  F  L  A  E  N  G  Y  K  R  K  S  I  F  D  F  L  I  T  E  N  F  S  L  S  A  F  I  F  L  S  N  K  I  K  V  S  I  D  *  V  C  V  T  C  C  C  S  *  V  R  *  S  *  R  S  L  R  Y  R  Y  F  F  N  R  F  N  P  F  Y  L  G  R  N  *  S  I  T  L  G  T  V  R  G  L  N  F  L  R  T  H  S  S  F  C  G  L  G  L  I  L  V  F  Y  I  I  F  C  F  I  L  F  L  F  L  F  L  F  I  N  F  I  N  T  S  C  C  K  N  N  N  L  K  K  F  N  S  F  C  I  *  G  F  W  R  L  K  P  L  W  F  S  T  L  L  E  F  L  K  F  I  R  L  T  I  K  R  T  *  K  L  Y  R  *  T  R  N  S  L  C  K  D  L  F  F  T  V  S  I  L  N  T  *  F  I  C  H  L  *  Q  K  K  K  D  *  F  K  S  N  K  C  W  N  S  K  C  C  N  N  N  G  C  T  *  S  F  K  C  C  L  S  T  G  *  E  T  C  K  V  F  W  S  R  L  *  E  M  V  A  K  D  V  L  L  S  H  Y  V  E  S  A  E  V  H  Q  R  E  C  S  C  Y  V  R  *  N  F  G  *  *  T  I  I  G  N  R  S  M  D  T  L  R  F  F  V  *  K  L  Y  F  E  W  S  T  R  *  S  V  Q  C  V  Q  Q  C  K  N  L  K  R  T  L  G  C  F  R  K  E  V  Q  N  R  R  C  R  N  E  E  I  H  C  G  K  I  S  G  L  *  D  D  R  Q  *  D  C  R  H  P  S  S  R  I  A  G  H  N  T  *  S  P  C  *  R  I  N  Y  E  *  C  F  S  S  G  C  N  Y  *  K  V  T  S  I  V  E  G  L  *  K  L  L  E  T  Q  T  Q  *  D  D  C  * </second_frame>
            <third_frame>   T  C  S  L  L  K  M  A  I  K  G  S  Q  F  L  I  F  *  S  L  K  I  F  H  S  L  H  L  F  F  S  Q  I  K  S  K  C  R  S  T  E  S  V  *  L  V  A  V  L  K  F  V  E  V  K  E  V  *  G  T  A  I  S  L  T  G  L  I  R  F  I  L  G  E  I  N  P  *  P  W  V  Q  *  G  D  *  I  S  *  G  H  T  V  V  S  V  D  S  D  *  F  L  Y  S  I  L  F  S  A  S  S  Y  F  C  F  C  F  C  L  L  T  L  *  I  Q  V  V  V  R  I  T  I  L  R  N  L  T  V  S  V  F  E  V  S  G  D  *  N  L  Y  G  F  L  L  C  L  N  F  *  N  S  F  D  *  R  L  K  E  H  K  N  F  I  V  K  P  E  T  V  C  V  K  I  C  S  L  L  L  V  F  *  I  L  N  L  S  A  I  C  D  R  K  K  K  T  N  S  S  Q  T  N  A  G  T  V  S  A  A  T  T  T  V  A  H  N  R  S  N  V  A  L  A  L  A  K  K  P  A  K  F  S  G  V  D  F  K  R  W  *  Q  K  M  F  F  Y  L  T  M  L  S  L  Q  K  F  I  K  E  N  V  P  V  M  S  D  E  T  L  A  D  E  R  L  L  V  T  E  A  W  T  H  S  D  F  L  C  K  N  Y  I  L  S  G  L  Q  D  D  L  Y  N  V  Y  N  N  A  K  T  S  K  E  L  W  D  A  L  E  K  K  Y  K  T  E  D  A  G  M  K  K  F  I  V  A  K  F  L  D  F  K  M  I  D  S  K  T  V  V  T  Q  V  Q  E  L  Q  V  I  I  H  D  L  L  A  E  G  L  I  M  N  D  A  F  Q  V  A  A  I  I  E  K  L  P  P  L  W  K  D  F  K  N  Y  L  K  H  K  R  N  E  M  T  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44215" stop="43739"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKMFFYLTMLSLQKFIKENVPVMSDETLADERLLVTEAWTHSDFLCKNYILSGLQDDLYNVYNNAKTSKELWDALEKKYKTEDAGMKKFIVAKFLDFKMIDSKTVVTQVQELQVIIHDLLAEGLIMNDAFQVAAIIEKLPPLWKDFKNYLKHKRNEMTV</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44735" stop="44538"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SITLGTVRGLNFLRTHSSFCGLGLILVFYIIFCFILFLFLFLFINFINTSCCKNNNLKKFNSFCI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="44982" e_stop="44788"/>
            <exon e_start="44360" e_stop="43737"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.759" acc_prob="0.970" e_score="0.903"/>
          <exon-only e_score="0.967"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="44982" e_stop="44788" e_length="195"/>
          </exon>
          <intron i_serial="1" don_prob="0.759" acc_prob="0.970">
            <gDNA_intron_boundary i_start="44787" i_stop="44361" i_length="427"/>
          </intron>
          <exon e_serial="2" e_score="0.967">
            <gDNA_exon_boundary e_start="44360" e_stop="43737" e_length="624"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44982" stop="44788"/>
              <exon start="44360" stop="43864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542858" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44344" stop="43737"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251204" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACAGATTTCACTGAACAGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAATTTTTGATTTTTTAATCACTGAAAATTTTTCACTCTCTGCATTTATTTTTCTCTCAAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAG : AAAAAAAAAGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGTTGCCTTAGCACTGGCTAAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGTAGCAAAAGATGTTCTTCTATCTCACTATGTTGAGTCTGCAGAAGTTCATCAAAGAGAATGTTCCTGTTATGTCAGATGAAACTTTGGCTGATGAACGATTATTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTACAAGATGATCTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATACATGATCTCCTTGCTGAAGGATTAATTATGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAATGAGATGACTGTTGA</gDNA_template>
            <first_frame> E  Q  I  S  L  N  R  H  V  P  C  *  K  W  L  *  K  E  V  N  F  *  F  F  N  H  *  K  F  F  T  L  C  I  Y  F  S  L  K  *  N  Q  S  V  D  R  L  S  L  C  D  L  L  L  F  L  S  S  L  K  L  K  K  F  E  :  K  K  K  D  *  F  K  S  N  K  C  W  N  S  K  C  C  N  N  N  G  C  T  *  S  F  K  C  C  L  S  T  G  *  E  T  C  K  V  F  W  S  R  L  *  E  M  V  A  K  D  V  L  L  S  H  Y  V  E  S  A  E  V  H  Q  R  E  C  S  C  Y  V  R  *  N  F  G  *  *  T  I  I  G  N  R  S  M  D  T  L  R  F  F  V  *  K  L  Y  F  E  W  S  T  R  *  S  V  Q  C  V  Q  Q  C  K  N  L  K  R  T  L  G  C  F  R  K  E  V  Q  N  R  R  C  R  N  E  E  I  H  C  G  K  I  S  G  L  *  D  D  R  Q  *  D  C  R  H  P  S  S  R  I  A  G  H  N  T  *  S  P  C  *  R  I  N  Y  E  *  C  F  S  S  G  C  N  Y  *  K  V  T  S  I  V  E  G  L  *  K  L  L  E  T  Q  T  Q  *  D  D  C  * </first_frame>
            <second_frame>  N  R  F  H  *  T  D  M  F  L  A  E  N  G  Y  K  R  K  S  I  F  D  F  L  I  T  E  N  F  S  L  S  A  F  I  F  L  S  N  K  I  K  V  S  I  D  *  V  C  V  T  C  C  C  S  *  V  R  *  S  *  R  S  L  R :   K  K  K  T  N  S  S  Q  T  N  A  G  T  V  S  A  A  T  T  T  V  A  H  N  R  S  N  V  A  L  A  L  A  K  K  P  A  K  F  S  G  V  D  F  K  R  W  *  Q  K  M  F  F  Y  L  T  M  L  S  L  Q  K  F  I  K  E  N  V  P  V  M  S  D  E  T  L  A  D  E  R  L  L  V  T  E  A  W  T  H  S  D  F  L  C  K  N  Y  I  L  S  G  L  Q  D  D  L  Y  N  V  Y  N  N  A  K  T  S  K  E  L  W  D  A  L  E  K  K  Y  K  T  E  D  A  G  M  K  K  F  I  V  A  K  F  L  D  F  K  M  I  D  S  K  T  V  V  T  Q  V  Q  E  L  Q  V  I  I  H  D  L  L  A  E  G  L  I  M  N  D  A  F  Q  V  A  A  I  I  E  K  L  P  P  L  W  K  D  F  K  N  Y  L  K  H  K  R  N  E  M  T  V   </second_frame>
            <third_frame>   T  D  F  T  E  Q  T  C  S  L  L  K  M  A  I  K  G  S  Q  F  L  I  F  *  S  L  K  I  F  H  S  L  H  L  F  F  S  Q  I  K  S  K  C  R  S  T  E  S  V  *  L  V  A  V  L  K  F  V  E  V  K  E  V  *   : E  K  K  R  L  I  Q  V  K  Q  M  L  E  Q  *  V  L  Q  Q  Q  R  L  H  I  I  V  Q  M  L  P  *  H  W  L  R  N  L  Q  S  F  L  E  S  T  L  R  D  G  S  K  R  C  S  S  I  S  L  C  *  V  C  R  S  S  S  K  R  M  F  L  L  C  Q  M  K  L  W  L  M  N  D  Y  W  *  Q  K  H  G  H  T  Q  I  F  C  V  K  I  I  F  *  V  V  Y  K  M  I  C  T  M  C  T  T  M  Q  K  P  Q  K  N  S  G  M  L  *  K  R  S  T  K  Q  K  M  P  E  *  R  N  S  L  W  Q  N  F  W  T  L  R  *  *  T  V  R  L  S  S  P  K  F  K  N  C  R  S  *  Y  M  I  S  L  L  K  D  *  L  *  M  M  L  F  K  W  L  Q  L  L  K  S  Y  L  H  C  G  R  T  L  K  T  T  *  N  T  N  A  M  R  *  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44215" stop="43739"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QKMFFYLTMLSLQKFIKENVPVMSDETLADERLLVTEAWTHSDFLCKNYILSGLQDDLYNVYNNAKTSKELWDALEKKYKTEDAGMKKFIVAKFLDFKMIDSKTVVTQVQELQVIIHDLLAEGLIMNDAFQVAAIIEKLPPLWKDFKNYLKHKRNEMTV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="46128" PGL_stop="46816"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46128" e_stop="46816"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="46128" e_stop="46816" e_length="689"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46128" stop="46816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E412642" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTCGAGTAATTCCCTATCTGGCCCACTGCCTAGCAACACAAGCATGCTTCCAAAACTAATCCATCTAAATTTGTCATACAACTCACTGAATGGTACCATACCATCTTGGGTGTTTAGCCTACCTTTGCTATATTCAGTGTCCCTCCAACATAACCGATTCAGAGGACTAGCCGATGAAGTGATCAAAACAAACCCAACATTAAAAGAACTGCATTTAAGCAATAATCAACTCAGTGGTTCTTTTCCTCAATCACTTGCGAATCTCACAAACCTTGAAACCCTTGGAATTTCATCAAATAACATCACCGTTGATGAGGGAATGAATATCACCTTTCTTAGCCTATCATCTTTATTCTTATCATCTTGTCAACTGAAGCATTTTCCATACTTCTTGAGAAATGTAAACACACTTGTGTACTTGGATATTTCTAACAATAAGATTTCTGGTCAAATCCCTAACTGGTTTAGCGGCATGAGGTGGGACTCGTTGATTTTCTTAAACCTTTCTCATAATTCATTAACAGGCAACCTACCACAATTTCGTTACGATAACCTAGGGTATCTTGATCTGAAATTTAACTCCCTTCAGGGTCCACTACCTTCATCCATTTGTAACATGAGCAAACTTATGTTATTAGATTTATCACACAACTACTTAAGCAACTCAGTTCCACATTGCTTGGGAAGCA</gDNA_template>
            <first_frame> V  E  *  F  P  I  W  P  T  A  *  Q  H  K  H  A  S  K  T  N  P  S  K  F  V  I  Q  L  T  E  W  Y  H  T  I  L  G  V  *  P  T  F  A  I  F  S  V  P  P  T  *  P  I  Q  R  T  S  R  *  S  D  Q  N  K  P  N  I  K  R  T  A  F  K  Q  *  S  T  Q  W  F  F  S  S  I  T  C  E  S  H  K  P  *  N  P  W  N  F  I  K  *  H  H  R  *  *  G  N  E  Y  H  L  S  *  P  I  I  F  I  L  I  I  L  S  T  E  A  F  S  I  L  L  E  K  C  K  H  T  C  V  L  G  Y  F  *  Q  *  D  F  W  S  N  P  *  L  V  *  R  H  E  V  G  L  V  D  F  L  K  P  F  S  *  F  I  N  R  Q  P  T  T  I  S  L  R  *  P  R  V  S  *  S  E  I  *  L  P  S  G  S  T  T  F  I  H  L  *  H  E  Q  T  Y  V  I  R  F  I  T  Q  L  L  K  Q  L  S  S  T  L  L  G  K   </first_frame>
            <second_frame>  S  S  N  S  L  S  G  P  L  P  S  N  T  S  M  L  P  K  L  I  H  L  N  L  S  Y  N  S  L  N  G  T  I  P  S  W  V  F  S  L  P  L  L  Y  S  V  S  L  Q  H  N  R  F  R  G  L  A  D  E  V  I  K  T  N  P  T  L  K  E  L  H  L  S  N  N  Q  L  S  G  S  F  P  Q  S  L  A  N  L  T  N  L  E  T  L  G  I  S  S  N  N  I  T  V  D  E  G  M  N  I  T  F  L  S  L  S  S  L  F  L  S  S  C  Q  L  K  H  F  P  Y  F  L  R  N  V  N  T  L  V  Y  L  D  I  S  N  N  K  I  S  G  Q  I  P  N  W  F  S  G  M  R  W  D  S  L  I  F  L  N  L  S  H  N  S  L  T  G  N  L  P  Q  F  R  Y  D  N  L  G  Y  L  D  L  K  F  N  S  L  Q  G  P  L  P  S  S  I  C  N  M  S  K  L  M  L  L  D  L  S  H  N  Y  L  S  N  S  V  P  H  C  L  G  S  </second_frame>
            <third_frame>   R  V  I  P  Y  L  A  H  C  L  A  T  Q  A  C  F  Q  N  *  S  I  *  I  C  H  T  T  H  *  M  V  P  Y  H  L  G  C  L  A  Y  L  C  Y  I  Q  C  P  S  N  I  T  D  S  E  D  *  P  M  K  *  S  K  Q  T  Q  H  *  K  N  C  I  *  A  I  I  N  S  V  V  L  F  L  N  H  L  R  I  S  Q  T  L  K  P  L  E  F  H  Q  I  T  S  P  L  M  R  E  *  I  S  P  F  L  A  Y  H  L  Y  S  Y  H  L  V  N  *  S  I  F  H  T  S  *  E  M  *  T  H  L  C  T  W  I  F  L  T  I  R  F  L  V  K  S  L  T  G  L  A  A  *  G  G  T  R  *  F  S  *  T  F  L  I  I  H  *  Q  A  T  Y  H  N  F  V  T  I  T  *  G  I  L  I  *  N  L  T  P  F  R  V  H  Y  L  H  P  F  V  T  *  A  N  L  C  Y  *  I  Y  H  T  T  T  *  A  T  Q  F  H  I  A  W  E  A </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46129" stop="46815"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>687</number_coding_nucleotides>
                  <number_encoded_amino_acids>229</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSNSLSGPLPSNTSMLPKLIHLNLSYNSLNGTIPSWVFSLPLLYSVSLQHNRFRGLADEVIKTNPTLKELHLSNNQLSGSFPQSLANLTNLETLGISSNNITVDEGMNITFLSLSSLFLSSCQLKHFPYFLRNVNTLVYLDISNNKISGQIPNWFSGMRWDSLIFLNLSHNSLTGNLPQFRYDNLGYLDLKFNSLQGPLPSSICNMSKLMLLDLSHNYLSNSVPHCLGS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="47005" PGL_stop="47775"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="47005" e_stop="47775"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.901"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.901">
            <gDNA_exon_boundary e_start="47005" e_stop="47775" e_length="771"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47005" stop="47372"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465444" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47180" stop="47775"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E431910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="47180" stop="47377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E400577" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACACGTTTCCAGCGTGGCTCGGAATTCTTCAAGAGCTGCAGGTCCTTATATTAAAGTCAAACAAGTTCCATGGACCTATAAGTACGTGTCATACTGAGTTTTGCTTTACCAAGTTGCGAATTTTTGATCTTTCTCGTAATGATTTCAGTGGCTCACTTCCTGCAAAAGTTTTTGGAAACTTCAAGGCAATGATCAAATTAGATGGTGAAGACATAGGAAATATCAAGTACATGACATCTCTGTTGAATTCGCCATTTGTCACATCGTATGAGAATTCAGTGAGTTTGGTTATCAAAGGGCAGGATTTGTAGCTACAAAGAATCAGCACAATTACGACAACCATAGATCTTTCAAGCAACCATTTTGAAGGTGTCATTCCGGAAACACTAAAAGATCTCAGCTCGCTTTGGCTACTCAATTTATCTCATAACAATCTTATAGGTCATATTCCAATGGAATTGGGGCAATTGATTACACTTGAAGCTTTAGATCTCTCCTGGAATCGGCTCACTGGAAAGATTCCGCAGGAATTGACAAGAATGAACTTTCTGTCCGTATTAAACCTCTCTCAAAATCATCTCATTGGACCAATTCCTCAAGGTCTACAGTTCAACACATTTGGAAATGACTCGTACGGCGGCAACCTTGATTTATGTGGTCCTCCTTTATCAAAACAATGTGGAACGAGTGATCCATCGCATGCTCCTCAACCATTGGAGGAAGAAGAAAAAGATGAAAGTGAGTCATATTTTTTTAGTGGATTTACGTGG</gDNA_template>
            <first_frame> D  T  F  P  A  W  L  G  I  L  Q  E  L  Q  V  L  I  L  K  S  N  K  F  H  G  P  I  S  T  C  H  T  E  F  C  F  T  K  L  R  I  F  D  L  S  R  N  D  F  S  G  S  L  P  A  K  V  F  G  N  F  K  A  M  I  K  L  D  G  E  D  I  G  N  I  K  Y  M  T  S  L  L  N  S  P  F  V  T  S  Y  E  N  S  V  S  L  V  I  K  G  Q  D  L  *  L  Q  R  I  S  T  I  T  T  T  I  D  L  S  S  N  H  F  E  G  V  I  P  E  T  L  K  D  L  S  S  L  W  L  L  N  L  S  H  N  N  L  I  G  H  I  P  M  E  L  G  Q  L  I  T  L  E  A  L  D  L  S  W  N  R  L  T  G  K  I  P  Q  E  L  T  R  M  N  F  L  S  V  L  N  L  S  Q  N  H  L  I  G  P  I  P  Q  G  L  Q  F  N  T  F  G  N  D  S  Y  G  G  N  L  D  L  C  G  P  P  L  S  K  Q  C  G  T  S  D  P  S  H  A  P  Q  P  L  E  E  E  E  K  D  E  S  E  S  Y  F  F  S  G  F  T  W </first_frame>
            <second_frame>  T  R  F  Q  R  G  S  E  F  F  K  S  C  R  S  L  Y  *  S  Q  T  S  S  M  D  L  *  V  R  V  I  L  S  F  A  L  P  S  C  E  F  L  I  F  L  V  M  I  S  V  A  H  F  L  Q  K  F  L  E  T  S  R  Q  *  S  N  *  M  V  K  T  *  E  I  S  S  T  *  H  L  C  *  I  R  H  L  S  H  R  M  R  I  Q  *  V  W  L  S  K  G  R  I  C  S  Y  K  E  S  A  Q  L  R  Q  P  *  I  F  Q  A  T  I  L  K  V  S  F  R  K  H  *  K  I  S  A  R  F  G  Y  S  I  Y  L  I  T  I  L  *  V  I  F  Q  W  N  W  G  N  *  L  H  L  K  L  *  I  S  P  G  I  G  S  L  E  R  F  R  R  N  *  Q  E  *  T  F  C  P  Y  *  T  S  L  K  I  I  S  L  D  Q  F  L  K  V  Y  S  S  T  H  L  E  M  T  R  T  A  A  T  L  I  Y  V  V  L  L  Y  Q  N  N  V  E  R  V  I  H  R  M  L  L  N  H  W  R  K  K  K  K  M  K  V  S  H  I  F  L  V  D  L  R   </second_frame>
            <third_frame>   H  V  S  S  V  A  R  N  S  S  R  A  A  G  P  Y  I  K  V  K  Q  V  P  W  T  Y  K  Y  V  S  Y  *  V  L  L  Y  Q  V  A  N  F  *  S  F  S  *  *  F  Q  W  L  T  S  C  K  S  F  W  K  L  Q  G  N  D  Q  I  R  W  *  R  H  R  K  Y  Q  V  H  D  I  S  V  E  F  A  I  C  H  I  V  *  E  F  S  E  F  G  Y  Q  R  A  G  F  V  A  T  K  N  Q  H  N  Y  D  N  H  R  S  F  K  Q  P  F  *  R  C  H  S  G  N  T  K  R  S  Q  L  A  L  A  T  Q  F  I  S  *  Q  S  Y  R  S  Y  S  N  G  I  G  A  I  D  Y  T  *  S  F  R  S  L  L  E  S  A  H  W  K  D  S  A  G  I  D  K  N  E  L  S  V  R  I  K  P  L  S  K  S  S  H  W  T  N  S  S  R  S  T  V  Q  H  I  W  K  *  L  V  R  R  Q  P  *  F  M  W  S  S  F  I  K  T  M  W  N  E  *  S  I  A  C  S  S  T  I  G  G  R  R  K  R  *  K  *  V  I  F  F  *  W  I  Y  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47317" stop="47775"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQRISTITTTIDLSSNHFEGVIPETLKDLSSLWLLNLSHNNLIGHIPMELGQLITLEALDLSWNRLTGKIPQELTRMNFLSVLNLSQNHLIGPIPQGLQFNTFGNDSYGGNLDLCGPPLSKQCGTSDPSHAPQPLEEEEKDESESYFFSGFTW</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="47005" stop="47316"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>309</number_coding_nucleotides>
                  <number_encoded_amino_acids>103</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DTFPAWLGILQELQVLILKSNKFHGPISTCHTEFCFTKLRIFDLSRNDFSGSLPAKVFGNFKAMIKLDGEDIGNIKYMTSLLNSPFVTSYENSVSLVIKGQDL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="54676" PGL_stop="53875"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54676" e_stop="53875"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.942"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.942">
            <gDNA_exon_boundary e_start="54676" e_stop="53875" e_length="802"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54676" stop="53875"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E623131" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54624" stop="54185"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267354" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATCTTCCTATTCCCATTGAACTTCAACCATCACAAAGCAAAACAAAAGATGTTGACACTATTAACCATTCTTTTCTTAGCATTTCTCTTCATTATTGGCCTTATCACAACAATTTTCAATTTCCCAACTAACAAGTTCCACTCTTTAATTCAATCAATCTCACTAGAATCTCAACCTCTCCAAGAAAGGACCATAACAACACCCCCATCATCATCATCAACAACAACATCCATGGTTGATCAAAAGAAGGCAAAAAGCTTTAACAATTACAACAAAGTTGAACTAAGGGGTATATTTGCAACTTTTGACAAGAACAATGATGGTTACATAACAAAGCAAGAATTGAAGCTATCTCTAAAGAATATTGGGATATTAATGGAGGATAAAGATATTGTTGATATGGTTGAGAAAGTTGATACAAACAAAGATGGTTTAATTGATCTTGATGAGTTTTGTGAACTTTGTCATACTTTCTTGGGAATAGATGGAGTGGAACAAGAAGGTGAAATGAATGAAGAAGAAGTTGCTAATAAAGAGAGAGATCTTAAAGAAGCTTTTGATGTGTTTGATCATGATAAAGATGGATTAATATCAGAAGAAGAATTGAGTAAGATACTTTCATCTTTAGGAATGAAAGAAGGTAAGAAATTGGATCATTGTAAAGAAATGATAAAGAAAGTTGATGTTGATGGTGATGGAATGGTGAACTTTGATGAGTTCAAGAAGATGATGAAAGCTTGAGTATTCTATAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN</gDNA_template>
            <first_frame> H  L  P  I  P  I  E  L  Q  P  S  Q  S  K  T  K  D  V  D  T  I  N  H  S  F  L  S  I  S  L  H  Y  W  P  Y  H  N  N  F  Q  F  P  N  *  Q  V  P  L  F  N  S  I  N  L  T  R  I  S  T  S  P  R  K  D  H  N  N  T  P  I  I  I  I  N  N  N  I  H  G  *  S  K  E  G  K  K  L  *  Q  L  Q  Q  S  *  T  K  G  Y  I  C  N  F  *  Q  E  Q  *  W  L  H  N  K  A  R  I  E  A  I  S  K  E  Y  W  D  I  N  G  G  *  R  Y  C  *  Y  G  *  E  S  *  Y  K  Q  R  W  F  N  *  S  *  *  V  L  *  T  L  S  Y  F  L  G  N  R  W  S  G  T  R  R  *  N  E  *  R  R  S  C  *  *  R  E  R  S  *  R  S  F  *  C  V  *  S  *  *  R  W  I  N  I  R  R  R  I  E  *  D  T  F  I  F  R  N  E  R  R  *  E  I  G  S  L  *  R  N  D  K  E  S  *  C  *  W  *  W  N  G  E  L  *  *  V  Q  E  D  D  E  S  L  S  I  L  *  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  </first_frame>
            <second_frame>  I  F  L  F  P  L  N  F  N  H  H  K  A  K  Q  K  M  L  T  L  L  T  I  L  F  L  A  F  L  F  I  I  G  L  I  T  T  I  F  N  F  P  T  N  K  F  H  S  L  I  Q  S  I  S  L  E  S  Q  P  L  Q  E  R  T  I  T  T  P  P  S  S  S  S  T  T  T  S  M  V  D  Q  K  K  A  K  S  F  N  N  Y  N  K  V  E  L  R  G  I  F  A  T  F  D  K  N  N  D  G  Y  I  T  K  Q  E  L  K  L  S  L  K  N  I  G  I  L  M  E  D  K  D  I  V  D  M  V  E  K  V  D  T  N  K  D  G  L  I  D  L  D  E  F  C  E  L  C  H  T  F  L  G  I  D  G  V  E  Q  E  G  E  M  N  E  E  E  V  A  N  K  E  R  D  L  K  E  A  F  D  V  F  D  H  D  K  D  G  L  I  S  E  E  E  L  S  K  I  L  S  S  L  G  M  K  E  G  K  K  L  D  H  C  K  E  M  I  K  K  V  D  V  D  G  D  G  M  V  N  F  D  E  F  K  K  M  M  K  A  *  V  F  Y  S  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F </second_frame>
            <third_frame>   S  S  Y  S  H  *  T  S  T  I  T  K  Q  N  K  R  C  *  H  Y  *  P  F  F  S  *  H  F  S  S  L  L  A  L  S  Q  Q  F  S  I  S  Q  L  T  S  S  T  L  *  F  N  Q  S  H  *  N  L  N  L  S  K  K  G  P  *  Q  H  P  H  H  H  H  Q  Q  Q  H  P  W  L  I  K  R  R  Q  K  A  L  T  I  T  T  K  L  N  *  G  V  Y  L  Q  L  L  T  R  T  M  M  V  T  *  Q  S  K  N  *  S  Y  L  *  R  I  L  G  Y  *  W  R  I  K  I  L  L  I  W  L  R  K  L  I  Q  T  K  M  V  *  L  I  L  M  S  F  V  N  F  V  I  L  S  W  E  *  M  E  W  N  K  K  V  K  *  M  K  K  K  L  L  I  K  R  E  I  L  K  K  L  L  M  C  L  I  M  I  K  M  D  *  Y  Q  K  K  N  *  V  R  Y  F  H  L  *  E  *  K  K  V  R  N  W  I  I  V  K  K  *  *  R  K  L  M  L  M  V  M  E  W  *  T  L  M  S  S  R  R  *  *  K  L  E  Y  S  I  V  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0211M21.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54675" stop="53935"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>738</number_coding_nucleotides>
                  <number_encoded_amino_acids>246</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IFLFPLNFNHHKAKQKMLTLLTILFLAFLFIIGLITTIFNFPTNKFHSLIQSISLESQPLQERTITTPPSSSSTTTSMVDQKKAKSFNNYNKVELRGIFATFDKNNDGYITKQELKLSLKNIGILMEDKDIVDMVEKVDTNKDGLIDLDEFCELCHTFLGIDGVEQEGEMNEEEVANKERDLKEAFDVFDHDKDGLISEEELSKILSSLGMKEGKKLDHCKEMIKKVDVDGDGMVNFDEFKKMMKA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 217 chains have been computed
$ 
$ memory statistics:
$ 305912 bytes spliced alignments in total
$ 113 spliced alignments have been stored
$ 2707 bytes was the average size of a spliced alignment
$ 20720 bytes predicted gene locations in total
$ 12 predicted gene locations have been stored
$ 1726 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 277 backtrace matrices have been allocated
$ 
$ date finished: 2008-02-20 12:18:55
-->
