<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-10 21:07:25"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E725756" ref_strand="+" ref_description="SGN-E725756 [LA05CD03]">
      <seq>caaattcttactacacacactatcagtccaaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgatagagcagcaaaatcagcagggatgcctaangagaattatacccatatgcatttagaccttgcatcgcttgacagcgtcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10904" stop="12891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11204" g_stop="11354" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="247" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12591" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="546" r_length="299" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E725756" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725756" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11204" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAATTCTTACTACACACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAG</genome_strand>
        <mrna_strand>CAAATTCTTACTACACACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGATAGAGCAGCAAAATCAGCAGGGATGCCTAANGAGAATTATACCCATATGCATTTAGACCTTGCATCGCTTGACAGCGTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E745474" ref_strand="+" ref_description="SGN-E745474 [GI|47105604]">
      <seq>gacacactatcagtccaaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctccctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaaagcttacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaagagactggcatcacatttgcctccctataccctggctgcatcgcgacaacagggctattcagggagcatatccccttgtttaggctccttttccctccattccagaagtttatcaccaaaggattcgtctccgaggcagaatctggaaagagacttgcacaggttgttagtgatccaagtcttacaaaatcaggtgtgtactggagctggaacaagaactcttcctcctttgagaaccagttgtcagaagaagctagtgacgttgagaaagcgcgtaaagtgtgggaagtcagtgagaaactcgtgggattggcttagattttttgctgattgagttcaaccatcaccaagacgaacacgaaaaaggagttgatgaaggagaatttgaatcgagtctgttttgttgtagttaaaaagttgtcacttcgtaaaatttttgagttaggaataaatatcattcatccttttagtaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10918" stop="123528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11217" g_stop="11354" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="234" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="763" r_length="529" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="13280" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="764" r_stop="1122" r_length="359" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13621" g_stop="13928" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="1123" r_stop="1430" r_length="308" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="13929" i_stop="14065" i_length="137">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="14066" g_stop="14081" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1431" r_stop="1446" r_length="16" r_score="0.812"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E745474" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1446</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E745474" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11217" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="13280"/>
          <exon e_start="13621" e_stop="13928"/>
          <exon e_start="14066" e_stop="14081"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAGAATCGAGCGCTTACCAACACGCCAACAATTATAGCGCTCACAACTTTAAGTCCACCCAACAAGCGTCATGTTCGATCAATGACTCACTCAACAATTTCCAGTATGAATGATCATGTGAATTATGATTCCGTATTCACTACATAAAAACAAAAA</genome_strand>
        <mrna_strand>GACACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCCCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAG.........................................................................................................................................TAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E747194" ref_strand="+" ref_description="SGN-E747194 [GI|9049761]">
      <seq>cgcggggacactatcagtccaaaaatcattttttaaaatctccatcttacaattttttcaaacaaaaatcattttcctaatataatcatggcccttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacaggaaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaaagcttacgaagacagcaaggtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10920" stop="13373"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11220" g_stop="11354" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="8" r_stop="141" r_length="134" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="237" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="766" r_length="529" r_score="0.998"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="13065" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="767" r_stop="910" r_length="144" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E747194" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>904</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747194" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11220" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="13065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACA</genome_strand>
        <mrna_strand>ACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTC-AAACAAAAATCATTTTCCTAATATAATCATGGCCCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGAAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACGAAGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E718155" ref_strand="+" ref_description="SGN-E718155 [FC03DE01]">
      <seq>cccatggggatccgatacactatcagtccaaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacacattggctggaaatgtacctccaaaggccaacctccgggacttgaggggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10915" stop="13285"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11220" g_stop="11354" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="151" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="247" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="776" r_length="529" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12985" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="777" r_stop="840" r_length="64" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E718155" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E718155" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11220" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12985"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTT</genome_strand>
        <mrna_strand>ACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCCGGGACTTGAGGGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E320285" ref_strand="+" ref_description="SGN-E320285 [cTOB-21-N7]">
      <seq>tccaaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattacagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagagaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtacagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaagagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10930" stop="13090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11230" g_stop="11354" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="221" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12790" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="719" r_length="498" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E320285" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320285" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11230" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCA</genome_strand>
        <mrna_strand>TCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTACAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAGAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTACAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAAGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E740113" ref_strand="+" ref_description="SGN-E740113 [LC20AF03]">
      <seq>caaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaagcttacaaagacagcaggtttgcaatatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10932" stop="13384"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11232" g_stop="11354" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="219" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="748" r_length="529" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="13084" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="749" r_stop="909" r_length="161" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E740113" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>911</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E740113" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11232" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="13084"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCT</genome_strand>
        <mrna_strand>CAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCC-AAGCTTACAAAGACAGC-AGGTTTGCAATATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E319156" ref_strand="+" ref_description="SGN-E319156 [cTOB-16-E4]">
      <seq>caaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10932" stop="12908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11232" g_stop="11354" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="219" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12608" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="535" r_length="316" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E319156" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11232" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACT</genome_strand>
        <mrna_strand>CAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E314273" ref_strand="+" ref_description="SGN-E314273 [cTOA-21-P2]">
      <seq>caaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcnaaatcagcaggnatgccctaagagaattatacaataatgcatttagaccttgcatcgcttgacagcgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10932" stop="12889"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11232" g_stop="11354" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="219" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12589" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="516" r_length="297" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E314273" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E314273" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11232" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12589"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTC</genome_strand>
        <mrna_strand>CAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCNAAATCAGCAGGNATGCCCTAAGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E313556" ref_strand="+" ref_description="SGN-E313556 [cTOA-12-B5]">
      <seq>caaaaatcattttttaaaatctccatcttacaattggggcaaatcaaaaatcattgtcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggatgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgcgtagtaatcactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10932" stop="12713"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11232" g_stop="11354" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="123" r_length="123" r_score="0.951"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="124" r_stop="219" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12413" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="340" r_length="121" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E313556" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>340</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E313556" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11232" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12413"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTG</genome_strand>
        <mrna_strand>CAAAAATCATTTTTTAAAATCTCCATCTTACAATTGGGGCAAATCAAAAATCATTGTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGATGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGCGTAGTAATCACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E738407" ref_strand="+" ref_description="SGN-E738407 [LC13CB01]">
      <seq>caatatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatgggtgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10934" stop="13349"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11233" g_stop="11354" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="218" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="747" r_length="529" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="13049" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="748" r_stop="876" r_length="129" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E738407" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>875</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738407" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11233" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="13049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGAT-GGTGCC</genome_strand>
        <mrna_strand>CAATATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGGTGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E316761" ref_strand="+" ref_description="SGN-E316761 [cTOB-6-A19]">
      <seq>aaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaagtcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10933" stop="13036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11233" g_stop="11354" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="218" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12736" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="662" r_length="444" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E316761" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E316761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11233" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCAT</genome_strand>
        <mrna_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAGTCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E265763" ref_strand="+" ref_description="SGN-E265763 [cLEI-11-F19]">
      <seq>aaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctccattccaaaggaggggaaaactagtgcatctttgaaagattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10933" stop="12962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11233" g_stop="11354" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="218" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12662" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="588" r_length="370" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E265763" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>588</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11233" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATC</genome_strand>
        <mrna_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCCATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAAGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E295538" ref_strand="+" ref_description="SGN-E295538 [cLET-23-H9]">
      <seq>aaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaagcaatcctcttgatgtattggtttgcaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10933" stop="12951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11233" g_stop="11354" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="218" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12651" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="577" r_length="359" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E295538" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E295538" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11233" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGC</genome_strand>
        <mrna_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAAGCAATCCTCTTGATGTATTGGTTTGCAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E266161" ref_strand="+" ref_description="SGN-E266161 [cLEI-6-N12]">
      <seq>aaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10933" stop="12890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11233" g_stop="11354" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="218" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12590" g_length="298"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="516" r_length="298" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E266161" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11233" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCA</genome_strand>
        <mrna_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E312059" ref_strand="+" ref_description="SGN-E312059 [cTOA-11-M1]">
      <seq>aaaaatcattttttaaaatctccatcttacaatttttgcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctgttccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatgtctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtatagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10933" stop="12870"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11233" g_stop="11354" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="218" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12570" g_length="278"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="496" r_length="278" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E312059" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312059" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11233" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12570"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCT</genome_strand>
        <mrna_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTGCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTGTTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATGTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTATAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E265975" ref_strand="+" ref_description="SGN-E265975 [cLEI-6-F13]">
      <seq>aaaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10933" stop="12837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11233" g_stop="11354" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="122" r_length="122" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="218" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12537" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="463" r_length="245" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E265975" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>463</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265975" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11233" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCC</genome_strand>
        <mrna_strand>AAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E738327" ref_strand="+" ref_description="SGN-E738327 [LC13BA10]">
      <seq>catatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcacccatgattgacggtggtgactttgatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10935" stop="13345"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11234" g_stop="11354" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="217" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="746" r_length="529" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="13045" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="870" r_length="124" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E738327" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>870</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E738327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11234" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="13045"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGG</genome_strand>
        <mrna_strand>CATATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCACCCATGATTGACGGTGGTGACTTTGATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E346851" ref_strand="+" ref_description="SGN-E346851 [cTOF-32-A11]">
      <seq>aaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10934" stop="13089"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11234" g_stop="11354" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="217" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12789" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="714" r_length="497" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E346851" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E346851" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11234" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12789"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTC</genome_strand>
        <mrna_strand>AAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E319867" ref_strand="+" ref_description="SGN-E319867 [cTOB-12-G7]">
      <seq>aaaatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10934" stop="12891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11234" g_stop="11354" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="217" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12591" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="516" r_length="299" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E319867" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11234" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAG</genome_strand>
        <mrna_strand>AAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E268994" ref_strand="+" ref_description="SGN-E268994 [cLEI-16-G4]">
      <seq>aatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaagagatcaggcaatcctcttgatgtattggtttgcaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10936" stop="12951"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11236" g_stop="11354" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="215" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12651" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="574" r_length="359" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E268994" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11236" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12651"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGC</genome_strand>
        <mrna_strand>AATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAAGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E265614" ref_strand="+" ref_description="SGN-E265614 [cLEI-14-O10]">
      <seq>aatcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10936" stop="12908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11236" g_stop="11354" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="215" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12608" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="531" r_length="316" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E265614" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265614" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11236" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACT</genome_strand>
        <mrna_strand>AATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E697283" ref_strand="+" ref_description="SGN-E697283 [FA02AD04]">
      <seq>ccattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacaccattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10939" stop="13239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11238" g_stop="11354" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="213" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="742" r_length="529" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12939" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="761" r_length="19" r_score="0.889"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E697283" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E697283" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11238" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12939"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACA-CATTGG</genome_strand>
        <mrna_strand>CCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACACCATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E326903" ref_strand="+" ref_description="SGN-E326903 [cTOC-18-A8]">
      <seq>tcattttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggatgtgtagtaatcactggagcgtcttcaagactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10938" stop="12883"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11238" g_stop="11354" g_length="117"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="213" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12583" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="504" r_length="291" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E326903" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>504</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326903" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11238" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGAC</genome_strand>
        <mrna_strand>TCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGATGTGTAGTAATCACTGGAGCGTCTTCAAGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E729260" ref_strand="+" ref_description="SGN-E729260 [LA20CA07]">
      <seq>cattttttaaaatctccatncttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaacattaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10939" stop="13234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11239" g_stop="11354" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="213" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="742" r_length="529" r_score="0.998"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12934" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="755" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E729260" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729260" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11239" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTTTAAAATCTCCAT-CTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACAC</genome_strand>
        <mrna_strand>CATTTTTTAAAATCTCCATNCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACATTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E321117" ref_strand="+" ref_description="SGN-E321117 [cTOB-13-E10]">
      <seq>cattttttaaaatgtgcatcttacaattttgttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacacgaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtgattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaatgatgcatttaaaccttgcatcgcttgacagcgtcagacaatttgtccataactttaggagatcaggcaatcctcttgatgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10939" stop="12938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11239" g_stop="11354" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="117" r_length="117" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="118" r_stop="213" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12638" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="559" r_length="346" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E321117" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>558</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11239" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTTTTAAAATCTCCATCTTACAATTTT-TTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTAT</genome_strand>
        <mrna_strand>CATTTTTTAAAATGTGCATCTTACAATTTTGTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACACGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTGATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATGATGCATTTAAACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCCATAACTTTAGGAGATCAGGCAATCCTCTTGATGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E333683" ref_strand="+" ref_description="SGN-E333683 [cTOD-22-A9]">
      <seq>ttttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagaatgntgattgatgatttgaagcagtctgattaccctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10941" stop="13088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11241" g_stop="11354" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="210" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12788" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="706" r_length="496" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E333683" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E333683" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11241" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12788"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTT</genome_strand>
        <mrna_strand>TTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGAATGNTGATTGATGATTTGAAGCAGTCTGATTACCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E321508" ref_strand="+" ref_description="SGN-E321508 [cTOB-23-D18]">
      <seq>ttttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagaattgtgattgatgatttgaagcagtctgattacccttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10943" stop="13090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11243" g_stop="11354" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="208" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12790" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="706" r_length="498" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E321508" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E321508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11243" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCA</genome_strand>
        <mrna_strand>TTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGAATTGTGATTGATGATTTGAAGCAGTCTGATTACCCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E268527" ref_strand="+" ref_description="SGN-E268527 [cLEI-13-E22]">
      <seq>ttttaaaatctccatcttacaattttttcaaaacagagatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10943" stop="12790"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11243" g_stop="11354" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="208" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12490" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="406" r_length="198" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E268527" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>406</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11243" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12490"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGT</genome_strand>
        <mrna_strand>TTTTAAAATCTCCATCTTACAATTTTTTCAAAACAGAGATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E266300" ref_strand="+" ref_description="SGN-E266300 [cLEI-3-F16]">
      <seq>tttaaaatctccatcttacaattttttcaaaacaaagaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctgccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtacagactctcttaaagctgaaagagcagcaaaatcagcagggatgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10944" stop="12837"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11244" g_stop="11354" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="112" r_length="112" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="113" r_stop="208" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12537" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="453" r_length="245" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E266300" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>452</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266300" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11244" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAAAATCTCCATCTTACAATTTTTTCAAAACAAA-AATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCC</genome_strand>
        <mrna_strand>TTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAGAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTGCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTACAGACTCTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E320526" ref_strand="+" ref_description="SGN-E320526 [cTOB-22-M21]">
      <seq>tttaaaatctccatcttancaattttttcaaaanncaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10944" stop="12057"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11244" g_stop="11354" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="114" r_length="114" r_score="0.946"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11757" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="115" r_stop="174" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E320526" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>171</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E320526" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11244" e_stop="11354"/>
          <exon e_start="11698" e_stop="11757"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAAAATCTCCATCTTA-CAATTTTTTCAAAA--CAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCAT</genome_strand>
        <mrna_strand>TTTAAAATCTCCATCTTANCAATTTTTTCAAAANNCAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E268154" ref_strand="+" ref_description="SGN-E268154 [cLEI-15-M22]">
      <seq>ttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10945" stop="12955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11245" g_stop="11354" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="206" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12655" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="569" r_length="363" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E268154" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268154" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11245" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCT</genome_strand>
        <mrna_strand>TTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E279611" ref_strand="+" ref_description="SGN-E279611 [cLER-5-C13]">
      <seq>ttaaaatctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10945" stop="12908"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11245" g_stop="11354" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="206" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12608" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="522" r_length="316" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E279611" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279611" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11245" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12608"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACT</genome_strand>
        <mrna_strand>TTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E572987" ref_strand="+" ref_description="SGN-E572987 [32227]">
      <seq>aaaatcttcaccttacagtttttttagaacaaaactcaattcctaatatattcatggctcttcaggctgctgcatttcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatttctctctctgaccatgttaaatctgatttttgctcttcattcagaatcaagagcggtagaaagtcatccctcggagctattagagccgaaacgatggttgcatctcctggtgttacgaattcccctgtgacaggaaagaaaactttaagaaaaggttgtgtagtaatcactggagcctcttcaggattaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtgattatggcatgtagggactttcttaaagctgaaagagcaccaaaatcagcagggatgcctaaggagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtagataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgacttgaagcagtctgattaccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10987" stop="13087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11247" g_stop="11354" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="203" r_length="96" r_score="0.958"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.970" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12787" g_length="495"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="698" r_length="495" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E572987" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>699</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E572987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11247" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCT</genome_strand>
        <mrna_strand>AAAATCTTCACCTTACAGTTTTTTTAGAACAAAACTCA-ATTCCTAATATATTCATGGCTCTTCAGGCTGCTGCATTTCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTTGCTCTTCATTCAGAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGTAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAAACGATGGTTGCATCTCCTGGTGTTACGAATTCCCCTGTGACAGGAAAGAAAACTTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGATTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTGATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCACCAAAATCAGCAGGGATGCCTAAGGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTAGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGACTTGAAGCAGTCTGATTACCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E319157" ref_strand="+" ref_description="SGN-E319157 [cTOB-16-E16]">
      <seq>aaaatctccatcttacaatgttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagcgcctctttgaaggattcgagtctctttggaatatctctctctgaccatgttaaatctgattctggctcttcattcaaaatcacgagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgcaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtcatcactggagcgtcttcaggactaggactagctacatgcaaaagctctggctgagacagggaaatggcatgtcatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10947" stop="12782"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11247" g_stop="11354" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="204" r_length="96" r_score="0.948"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12482" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="395" r_length="191" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E319157" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>394</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E319157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11247" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12482"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACA-GCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTA</genome_strand>
        <mrna_strand>AAAATCTCCATCTTACAATGTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGCGCCTCTTTGAAGGATTCGAGTCTCTTTGGAATATCTCTCTCTGACCATGTTAAATCTGATTCTGGCTCTTCATTCAAAATCACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGCAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTCATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACATGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTCATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E266467" ref_strand="+" ref_description="SGN-E266467 [cLEI-3-P4]">
      <seq>atctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10950" stop="12955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11250" g_stop="11354" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="201" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12655" g_length="363"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="564" r_length="363" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E266467" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266467" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11250" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12655"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCT</genome_strand>
        <mrna_strand>ATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E265612" ref_strand="+" ref_description="SGN-E265612 [cLEI-14-M14]">
      <seq>atctccatcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactntcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10950" stop="12874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11250" g_stop="11354" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="201" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12574" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="483" r_length="282" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E265612" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11250" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12574"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCA</genome_strand>
        <mrna_strand>ATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTNTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E729106" ref_strand="+" ref_description="SGN-E729106 [LA20AA08]">
      <seq>atcttacaattttttcaaaacaaaaatcattttcctaatataatcatggctcttcaagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttaatgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgatttgaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10956" stop="13073"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11256" g_stop="11354" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="195" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12773" g_length="481"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="676" r_length="481" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E729106" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>676</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729106" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11256" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12773"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGC</genome_strand>
        <mrna_strand>ATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAATGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E474000" ref_strand="+" ref_description="SGN-E474000 [cSTB-34-M8]">
      <seq>ccaagaatcattttttaaaatctccatcttacaatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctttgacaggaaagaaaaccttaagaaaagggtgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacacggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaagagatcangcaatcctcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10931" stop="12935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11258" g_stop="11354" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="95" r_length="95" r_score="0.794"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="96" r_stop="191" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12635" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="534" r_length="343" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E474000" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>536</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474000" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11258" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATG</genome_strand>
        <mrna_strand>CCAAGAATCATTTTTTAA-AATCTCCATCTTAC-AATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTTTGACAGGAAAGAAAACCTTAAGAAAAGGGTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACACGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAAGAGATCANGCAATCCTCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E480047" ref_strand="+" ref_description="SGN-E480047 [cSTD-12-K12]">
      <seq>caagaatcattttttaaaatctccatcttacaatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagctttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaaggactcatcattggntggatcgattacaggaaacactaacacattggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10932" stop="13106"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11259" g_stop="11354" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.792"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="190" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="720" r_length="530" r_score="0.964"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.90"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12941" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="721" r_stop="740" r_length="20" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E480047" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11259" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGC-TTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATT-GTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCT</genome_strand>
        <mrna_strand>CAAGAATCATTTTTTAA-AATCTCCATCTTAC-AATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAG-GACTCATCATTGGNTGGATCGATTACAG....................................................................................................GAAACACTAACACATTGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E461125" ref_strand="+" ref_description="SGN-E461125 [cPRO-34-I16]">
      <seq>caagaatcattttttaaaatctccatcttacaatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctttgacaggaaagaaaaccttaagaaaagggtgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgattttgagcagtctgattacccttcaaagagactcatcattgntggttcgattacagggaacactaacacattggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10932" stop="13136"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11259" g_stop="11354" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.792"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="190" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="719" r_length="529" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12941" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="720" r_stop="739" r_length="20" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E461125" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E461125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11259" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12941"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCT</genome_strand>
        <mrna_strand>CAAGAATCATTTTTTAA-AATCTCCATCTTAC-AATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTTTGACAGGAAAGAAAACCTTAAGAAAAGGGTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTTGAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGNTGGTTCGATTACAG....................................................................................................GGAACACTAACACATTGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E462314" ref_strand="+" ref_description="SGN-E462314 [cPRO-11-E12]">
      <seq>caagaatcattttttaaaatctccatcttacaatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctttgacaggaaagaaaaccttaagaaaagggtgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagctttagtgtgggactaaccatcttggtcatttcctttctttcagatgttgattgatgaattgaagcagtctgattacccttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10932" stop="13090"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11259" g_stop="11354" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="0.792"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="190" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12790" g_length="498"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="687" r_length="497" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E462314" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>690</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E462314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11259" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12790"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTT-AGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCA</genome_strand>
        <mrna_strand>CAAGAATCATTTTTTAA-AATCTCCATCTTAC-AATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTTTGACAGGAAAGAAAACCTTAAGAAAAGGGTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTTAGTG-TGGGACTAACCATCTTGGTCATTTCCTTTCTTTCAGA-TGTTGATTGATGAATTGAAGCAGTCTGATTACCCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E342543" ref_strand="+" ref_description="SGN-E342543 [cTOF-8-P10]">
      <seq>ttttttcaaaacaaaaaatccttttcctacacaatcactggctcttcaagcctgctgcattgcttccttctactttctctcttccaaaggaggggaaaactagtgcatctttgaaggcttcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagcctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaagagatccngcaatcctcttgatgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10965" stop="12938"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11265" g_stop="11354" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.878"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="188" r_length="96" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12638" g_length="346"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="535" r_length="347" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E342543" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11265" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTCAAAACAAAAA-TCATTTTCCTAATATAATCA-TGGCTCTTCAAG-CTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAG-CTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTAT</genome_strand>
        <mrna_strand>TTTTTTCAAAACAAAAAATCCTTTTCCT-ACACAATCACTGGCTCTTCAAGCCTGCTGCATTGCTTCCTTCTACTTTCTCTCTTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGCTTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAAGAGATCCNGCAATCCTCTTGATGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E611056" ref_strand="+" ref_description="SGN-E611056 [60802]">
      <seq>attttttaaaatctccatcttacaatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattggtgattgactgattttgaagcagtctgattaccttcaaagagactcatcatttgtgggatcggatttacagggaaaacactaacacattggtggcaaatgtactcccaaaggccaaccttcggggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10940" stop="13134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11267" g_stop="11354" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.818"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="182" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="716" r_length="534" r_score="0.947"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.76"/>
            <acceptor a_prob="0.759" a_score="0.79"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12974" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="717" r_stop="771" r_length="55" r_score="0.811"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E611056" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E611056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11267" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12974"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGA-TGA-TTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCA-TTGTTGGTTC-GA-TTACA-GGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGG-AAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACC-TCGGGGAC</genome_strand>
        <mrna_strand>ATTTTTTAA-AATCTCCATCTTAC-AATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGGTGATTGACTGATTTTGAAGCAGTCTGATTA-CCTTCAAAGAGACTCATCATTTGTGGGATCGGATTTACAGG....................................................................................................GAAAACACTAACACATTGGTGGCAAATGTACTCCCAAAGGCCAACCTTCGGGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E462181" ref_strand="+" ref_description="SGN-E462181 [cPRO-10-J22]">
      <seq>attttttaaaatctccatcttacaatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggatcgattacaggaaacactaacacattggctggaaatgtacctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10940" stop="13255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11267" g_stop="11354" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="0.818"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="182" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="183" r_stop="711" r_length="529" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12955" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="712" r_stop="745" r_length="34" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E462181" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>747</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E462181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11267" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCC</genome_strand>
        <mrna_strand>ATTTTTTAA-AATCTCCATCTTAC-AATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGATCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E461928" ref_strand="+" ref_description="SGN-E461928 [cPRO-10-C23]">
      <seq>ttttaaaatctccatcttacaatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggatcgattacaggaaacactaacacattgggctggaaatgtacctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10943" stop="13255"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11270" g_stop="11354" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.824"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="179" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="708" r_length="529" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12955" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="743" r_length="35" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E461928" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>744</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E461928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11270" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATT-GGCTGGAAATGTACCTCC</genome_strand>
        <mrna_strand>TTTTAA-AATCTCCATCTTAC-AATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGATCGATTACAG....................................................................................................GAAACACTAACACATTGGGCTGGAAATGTACCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E404030" ref_strand="+" ref_description="SGN-E404030 [PPC-12-O20]">
      <seq>ttttaaaatctccatcttacaatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttncagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggatcgattacaggaaacactaacacattggctggaaatgtacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10943" stop="13252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11270" g_stop="11354" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.824"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="179" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="180" r_stop="708" r_length="529" r_score="0.974"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12922" g_stop="12952" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="739" r_length="31" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E404030" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11270" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACC</genome_strand>
        <mrna_strand>TTTTAA-AATCTCCATCTTAC-AATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTNCAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGATCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E402871" ref_strand="+" ref_description="SGN-E402871 [PPC-8-P6]">
      <seq>tttaaaatctccatcttacatatattcatggctcttcaggttgctgcattgcttccttctactttctctattcccaaggaggggaaaactagtgcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattaccct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="10944" stop="13087"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11275" g_stop="11354" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="81" r_length="81" r_score="0.825"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="177" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12787" g_length="495"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="672" r_length="495" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E402871" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>671</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E402871" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11275" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12787"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAAATCATTTTCCTA-ATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCT</genome_strand>
        <mrna_strand>TTTAAAATCTCCATCTTACATATATTCATGGCTCTTCAGGTTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCCAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E718416" ref_strand="+" ref_description="SGN-E718416 [FC04CD08]">
      <seq>aagctgctgcattgcttccttctactttctctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaaaaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgaaacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagactatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgtttacagctgaaggatttgagcttactgttgggactaaccatcttggtcatttccttctttcgagatcgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11011" stop="13111"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11311" g_stop="11354" g_length="44"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="44" r_length="44" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="140" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12293" g_stop="12811" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="659" r_length="519" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E718416" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>659</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E718416" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11311" e_stop="11354"/>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12811"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAGGTTTGTCTTTCATTATATTATCTTCGATTTAATTTACGTGACACTTTTCGTTTCCTAAAATTTGAATATCTACGTCTCCATCTATGTTGGTGTAACTATAAATCATTTCAGTAAAAATAAAATAAACATTTTACAGTTAAATTGCTACTAAATATAAAAAATATGTCATTATTTTAACTGATTAAAAATGAAAGCCTGACGATCGCGTAAATTAGAATAGGGAAAGTATGTATAAATTTTGACCAATGATATTAAGTTGATCTAGTTCAATTTAATTTCGAGATAAATTGACTCTAAAAAAGCCAAAGAAATACTTTTTTTACTCATTTATGTGATGTTGCAGGGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGT</genome_strand>
        <mrna_strand>AAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG.......................................................................................................................................................................................................................................................................................................................................................GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAAAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAAACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACTATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTACTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATCGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E317701" ref_strand="+" ref_description="SGN-E317701 [cTOB-8-B15]">
      <seq>tctattccaaaggaggggaaaactagtgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgagtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11394" stop="12829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11698" g_stop="11793" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="111" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12529" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="348" r_length="237" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E317701" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>333</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317701" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11698" e_stop="11793"/>
          <exon e_start="12293" e_stop="12529"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCA</genome_strand>
        <mrna_strand>GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGAGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E265498" ref_strand="+" ref_description="SGN-E265498 [cLEI-14-E24]">
      <seq>tgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11409" stop="12981"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11709" g_stop="11793" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12681" g_length="389"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="474" r_length="389" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E265498" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265498" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11709" e_stop="11793"/>
          <exon e_start="12293" e_stop="12681"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCC</genome_strand>
        <mrna_strand>TGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E265496" ref_strand="+" ref_description="SGN-E265496 [cLEI-14-E20]">
      <seq>tgcatctttgaaggattcgagtctctttggaatttctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggagtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactatcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11409" stop="12899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11709" g_stop="11793" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12599" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="392" r_length="307" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E265496" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265496" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11709" e_stop="11793"/>
          <exon e_start="12293" e_stop="12599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTG</genome_strand>
        <mrna_strand>TGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGAGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTATCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E459337" ref_strand="+" ref_description="SGN-E459337 [cPRO-27-F13]">
      <seq>gcaactttgaaggattctagtctctttggaatttctctctctgaccatgttaaatctgatttttgctcttcattcagaatcaagagcggaagaaagtcatccctcggagctattagagccgaaacgatggttgcatctcctggtgttacgaattcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggattaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtgattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtagataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgacttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacactaacactttggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttggcaagagggctcgatggacttaacagctcagcgatgattgatggtggtgactttgatggtgccaaagcatacaaagacagcaaggttttgcatatgctcactatgcagggattccatagacgataccacgaagagactggcatcacattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11410" stop="13436"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11710" g_stop="11793" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.970" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="613" r_length="529" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12922" g_stop="13136" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="828" r_length="215" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E459337" ref_strand="+">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>828</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459337" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11710" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="13136"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTT</genome_strand>
        <mrna_strand>GCAACTTTGAAGGATTCTAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTTGCTCTTCATTCAGAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAAACGATGGTTGCATCTCCTGGTGTTACGAATTCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGATTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTGATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTAGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGACTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACTAACACTTTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCAGCGATGATTGATGGTGGTGACTTTGATGGTGCCAAAGCATACAAAGACAGCAAGGTTTTGCATATGCTCACTATGCAGGGATTCCATAGACGATACCACGAAGAGACTGGCATCACATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E477854" ref_strand="+" ref_description="SGN-E477854 [cSTD-1-P20]">
      <seq>gcaactttgaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaagagacctcatcattgttggatcgattacaggaaacactaacacattggctggaaatgtacctccaaaggccaacctcggggacttgagggggttgggcagagggctcgatggacttaacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11410" stop="13312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11710" g_stop="11793" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="614" r_length="530" r_score="0.972"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.94"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12922" g_stop="13012" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="615" r_stop="705" r_length="91" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E477854" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E477854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11710" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="13012"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGA-CTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAG</genome_strand>
        <mrna_strand>GCAACTTTGAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACCTCATCATTGTTGGATCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGGTTGGGCAGAGGGCTCGATGGACTTAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E268053" ref_strand="+" ref_description="SGN-E268053 [cLEI-15-B2]">
      <seq>tttgaaggattcgagtctctttggaatttctctctgtgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagcccagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcaggactaggactaactacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactatcttaaagctgaaagagcagcaaagtcatcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgattgacagcgtgagacaatttgtcgataactttatgagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11415" stop="12964"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11715" g_stop="11793" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="79" r_length="79" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12664" g_length="372"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="451" r_length="372" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E268053" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>451</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268053" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11715" e_stop="11793"/>
          <exon e_start="12293" e_stop="12664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAG</genome_strand>
        <mrna_strand>TTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTGTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCCAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAACTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTATCTTAAAGCTGAAAGAGCAGCAAAGTCATCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGATTGACAGCGTGAGACAATTTGTCGATAACTTTATGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E575743" ref_strand="+" ref_description="SGN-E575743 [35415]">
      <seq>gaaggattctagtctctttggaatctctctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggatcgattacaggaaacactaacacattggctggaaatgtacctccaaaggccaacctcgggggacttgaggggtttggcaagagggctcgatggacttaacagctcggccatgattgatggtggtgactttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11418" stop="13344"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11718" g_stop="11793" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="605" r_length="529" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12922" g_stop="13044" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="729" r_length="124" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E575743" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E575743" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11718" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="13044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTC-GGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATG</genome_strand>
        <mrna_strand>GAAGGATTCTAGTCTCTTTGGAATCTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGATCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGGACTTGAGGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCGGCCATGATTGATGGTGGTGACTTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E265765" ref_strand="+" ref_description="SGN-E265765 [cLEI-11-H17]">
      <seq>tctctctgaccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatggttgcatctcccggtgtaacgagtacccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcgtcttcatgactacgactagctacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagagactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattatacaataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttatgagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11445" stop="12962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11745" g_stop="11793" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="49" r_length="49" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12662" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="50" r_stop="419" r_length="370" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E265765" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E265765" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11745" e_stop="11793"/>
          <exon e_start="12293" e_stop="12662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATC</genome_strand>
        <mrna_strand>TCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCATGACTACGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTATGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E477411" ref_strand="+" ref_description="SGN-E477411 [cSTB-48-I21]">
      <seq>ccatgttaaatctgattttggctcttcattcaaaatcaagagcggaagaaagtcatccctcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctttgacaggaaagaaaaccttaagaaaagggtgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacactaacacattggctggaaatgtacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="11454" stop="13252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="11754" g_stop="11793" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="40" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12293" g_stop="12821" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="41" r_stop="569" r_length="529" r_score="0.974"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12922" g_stop="12952" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="570" r_stop="600" r_length="31" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E477411" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>600</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E477411" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="11754" e_stop="11793"/>
          <exon e_start="12293" e_stop="12821"/>
          <exon e_start="12922" e_stop="12952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAGGTATAATTTTAGCTTTCAGGTGGTTTAATTCGATGCAACGCAAAAATAAAAATTGTCATTAAACTTTACCTACTGTGTAACACTAAAGTCACAAAACACTGTTTTCTGTCACATTATAAAGTAAATTAACTTTACAAGGTATACTATTACATTTAGTGATGATATAGGTGAAATTAACCTACTGTAATTTCGTTACAGATTGGAGGAAAGTAATCCCCCGTTGCTATTAGAGCCGAGACAATTGTCACAACACACATTTTTTTGTCATATTATAAAGTAACTAAACTTAACGAGCAATTCTAGTACACATACGTGAAATTAACCTGTTAGAATTTCATTACAGAAACAAGTCATCCCTCAGAGCTATTAGAGCCAAGACGATGTCACAACTCACAACACACATTCCTTTTGTCACATTATGAAGCAACTGAACTTTCCAAACTATACTAGTGCATTCAGTGACCATACGTGAAATTAACCTGTTGTAATTTCGTTACAGAGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACC</genome_strand>
        <mrna_strand>CCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTTTGACAGGAAAGAAAACCTTAAGAAAAGGGTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E573961" ref_strand="+" ref_description="SGN-E573961 [33353]">
      <seq>cctcgtgccgcggagctattagagccgagacaatgattgcatctcccggtgttacgaatgcccctgtgacaggaaagaaaaccttaagaaaaggttgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcaggggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggatcgattacaggaaacactaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaagggtgttttggcaaaggagggctcgaatggacttaaaccagcttcggccatgatttgatggtgggtgacttttgatggtgccaaagcataccaagacagacaaggttttgcaatatgctccactatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12005" stop="13391"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12303" g_stop="12821" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="520" r_length="520" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13065" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="676" r_length="156" r_score="0.792"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E573961" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12303" e_stop="12821"/>
          <exon e_start="12922" e_stop="13065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCA-GGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTG-AGGG-G-TTTAGC-AAGG-GGGCTCG-ATGGACTT-AA-CAGC-TCAGCCATGA-TTGACGGT-GGTGAC-TTTGATGGTGCCAAAGCTTACAAAGACA</genome_strand>
        <mrna_strand>CCTCGTGCCGCGGAGCTATTAGAGCCGAGACAATGATTGCATCTCCCGGTGTTACGAATGCCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGATCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAAGGGTGTTTTGGCAAAGGAGGGCTCGAATGGACTTAAACCAGCTTCGGCCATGATTTGATGGTGGGTGACTTTTGATGGTGCCAAAGCATACCAAGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E459734" ref_strand="+" ref_description="SGN-E459734 [cPRO-28-D12]">
      <seq>agaaaaccttaagaaaagggtgtgtagtaatcactggagcctcttcaggactaggactagcaacagcaaaagctctggctgagacagggaaatggcatgtaattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaagagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacactaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttggcaagagggctcgatggacttaacagctcggccatgattgatggtggtgactttgatggtgccaaagcatacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaagagactggcatcacatttgcctctctataccctggctgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12078" stop="13459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12378" g_stop="12821" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="444" r_length="444" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13159" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="682" r_length="238" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E459734" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E459734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12378" e_stop="12821"/>
          <exon e_start="12922" e_stop="13159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCAT</genome_strand>
        <mrna_strand>AGAAAACCTTAAGAAAAGGGTGTGTAGTAATCACTGGAGCCTCTTCAGGACTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAAGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCGGCCATGATTGATGGTGGTGACTTTGATGGTGCCAAAGCATACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCTCTATACCCTGGCTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E615778" ref_strand="+" ref_description="SGN-E615778 [65580]">
      <seq>aatcactggagcctcttcaggattaggactagcaacagcaaaagctctggctgagacagggnaaatggcatgtgattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtagataactttagngagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgacttgaagcagtctgattacccttcaaagagactcatcattgntggttcgattacaggaaacactaacactttggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttggcaagagggctcgatggacttaacagctcagcgatgattgatggtggtgactttgatggtgccaaagcatacaaagacagcaagttttgcaatatgctcactatgcaggaattccatagacgataaccacgaaagagacttggcatcacatttgcctctctatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12106" stop="13448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12406" g_stop="12821" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="418" r_length="418" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13148" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="419" r_stop="648" r_length="230" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E615778" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E615778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12406" e_stop="12821"/>
          <exon e_start="12922" e_stop="13148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGG-AAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAG-GAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGAT-ACCACG-AAGAGAC-TGGCATCACATTTGCCTCCCTATAC</genome_strand>
        <mrna_strand>AATCACTGGAGCCTCTTCAGGATTAGGACTAGCAACAGCAAAAGCTCTGGCTGAGACAGGGNAAATGGCATGTGATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTAGATAACTTTAGNGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGACTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGNTGGTTCGATTACAG....................................................................................................GAAACACTAACACTTTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCAGCGATGATTGATGGTGGTGACTTTGATGGTGCCAAAGCATACAAAGACAGCAAGTTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATAACCACGAAAGAGACTTGGCATCACATTTGCCTCTCTATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E472314" ref_strand="+" ref_description="SGN-E472314 [cSTB-28-E12]">
      <seq>aaaagctctggctgagacagggaaatggcatgtgattatggcatgtagggactttcttaaagctgaaagagcagcaaaatcagcagggatgcctaaggagaattacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtagataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcgagattgttgattgatgacttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacactaacactttggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttggcaagagggctcgatggacttaacagctcagcgatgattgatggtggtgactttgatggtgccaaagcatacaaagacagcaaggtttgcaatatgctcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12145" stop="13387"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12445" g_stop="12821" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13087" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="543" r_length="166" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E472314" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E472314" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12445" e_stop="12821"/>
          <exon e_start="12922" e_stop="13087"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCAC</genome_strand>
        <mrna_strand>AAAAGCTCTGGCTGAGACAGGGAAATGGCATGTGATTATGGCATGTAGGGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTAGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGACTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACTAACACTTTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCAGCGATGATTGATGGTGGTGACTTTGATGGTGCCAAAGCATACAAAGACAGCAAGGTTTGCAATATGCTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E573280" ref_strand="+" ref_description="SGN-E573280 [32565]">
      <seq>attacactataatgcatttagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggatcgattacaggaaacactaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttggcaagagggctcgatggacttaacagctcggccatgattgatggtggtgactttgatggtgccaaagcatacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaggagactggcatcacatttgcctctctataccctggctgcatcgcgacaacagggctatttaggagaacatatccccttgttttaggctacttttccctacattccagaaagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12246" stop="13528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12546" g_stop="12821" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13229" g_length="308"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="586" r_length="310" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E573280" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573280" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12546" e_stop="12821"/>
          <exon e_start="12922" e_stop="13229"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGG-GAGCATATCCCCTTG-TTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTT</genome_strand>
        <mrna_strand>ATTACACTATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGATCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCGGCCATGATTGATGGTGGTGACTTTGATGGTGCCAAAGCATACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAGGAGACTGGCATCACATTTGCCTCTCTATACCCTGGCTGCATCGCGACAACAGGGCTATTTAGGAGAACATATCCCCTTGTTTTAGGCTACTTTTCCCTACATTCCAGAAAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E415959" ref_strand="+" ref_description="SGN-E415959 [STM-22-C2]">
      <seq>gcattatagtgtaattagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgcttgatgatttgaagcagtctgattacccttcaaagagactcatcattgtcggttcgattacaggaaacactaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttggcaagagggctcgatggacttaacagctcggccatgattgatggtggtgactttgatggtgccaaagcatacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaggacactggcatcacatttgcctctctataccctgnctgcattgcgacaacagggctattcagagagcatatccccctgtttaggctacttttcccttcattccagaaagttattacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12254" stop="13535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12549" g_stop="12821" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13235" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="587" r_length="314" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E415959" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E415959" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12549" e_stop="12821"/>
          <exon e_start="12922" e_stop="13235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACC</genome_strand>
        <mrna_strand>GCATTATAGTGTAATTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGCTTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTCGGTTCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCGGCCATGATTGATGGTGGTGACTTTGATGGTGCCAAAGCATACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAGGACACTGGCATCACATTTGCCTCTCTATACCCTGNCTGCATTGCGACAACAGGGCTATTCAGAGAGCATATCCCCCTGTTTAGGCTACTTTTCCCTTCATTCCAGAAAGTTATTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E438028" ref_strand="+" ref_description="SGN-E438028 [cSTA-5-L20]">
      <seq>gcattatagtgtaattagaccttgcatcgcttgacagcgtcagacaatttgtcgataactttaggagatcaggcaatcctcttgatgtattggtttgcaatgcagctgtttatcagcctaccgcgaaagagccttcgttcacagctgaaggatttgagcttagtgttgggactaaccatcttggtcatttccttctttcaagattgttgcttgatgatttgaagcagtctgattacccttcaaagagactcatcattgtcggttcgattacaggaaacactaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttggcaagagggctcgatggacttaacagctcggccatgattgatggtggtgactttgatggtgccaaagcatacaaagacagcaaggtttgcaatatgctcactatgcangaattccatagacgataccacgaggacactggcatcacatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12254" stop="13437"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12549" g_stop="12821" g_length="273"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="273" r_length="273" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.759" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13137" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="274" r_stop="489" r_length="216" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E438028" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E438028" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12549" e_stop="12821"/>
          <exon e_start="12922" e_stop="13137"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTG</genome_strand>
        <mrna_strand>GCATTATAGTGTAATTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTCACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCAAGATTGTTGCTTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTCGGTTCGATTACAG....................................................................................................GAAACACTAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCGGCCATGATTGATGGTGGTGACTTTGATGGTGCCAAAGCATACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCANGAATTCCATAGACGATACCACGAGGACACTGGCATCACATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E268051" ref_strand="+" ref_description="SGN-E268051 [cLEI-15-P17]">
      <seq>gagattgttgattgatgatttgaagcagtctgattacccttcaaagagactcatcattgttggttcgattacaggaaacacaaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcaaccatgactgacggtggtgactttgatggtgccaaagcttacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaagagactggcatcacatttgcctccctataccctggctgcatctcgacaacatggctattcatggagcatatccccttgtttaggctccttttccctccattccagaagtttatcaccaaatgattcgtctccgatgcagaatctggaaagagacttgcacaggttgttagtgatccaagtcttacaaaatcaagtgtgtactggagctggaacaagaactcttcctcctttgagaaccagttgtcagaagaagctagtgacgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12448" stop="14024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12748" g_stop="12821" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13280" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="433" r_length="359" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13621" g_stop="13724" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="434" r_stop="537" r_length="104" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E268051" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>537</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268051" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12748" e_stop="12821"/>
          <exon e_start="12922" e_stop="13280"/>
          <exon e_start="13621" e_stop="13724"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGA</genome_strand>
        <mrna_strand>GAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG....................................................................................................GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAACCATGACTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCTCGACAACATGGCTATTCATGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAATGATTCGTCTCCGATGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTTAGTGATCCAAGTCTTACAAAATCAAGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E327166" ref_strand="+" ref_description="SGN-E327166 [cTOC-18-J7]">
      <seq>ttggttcgattacaggaaacacaaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaaagcttacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaagagactggcatcacatttgcctccctataccctggctgcatcgcgacaacagggctattcagggagcatatccccttgtttaggctccttttccctccattccagaagtttatcaccaaaggattcgtctccgaggcagaatctggaaagagacttgcacaggttgttagtgatccaagtcttacaaaatcaggtgtgtactggagctggaacaagaactcttcctcctttgagaaccagttgtcagaagaagctagtgacgttgagaaagcgcgtaaagtgtgggaagtcagtgagaaactcgtgggattggcttagattttttgctgattgagttcaaccatcaccaagacgaacacgaaaaaggagttgatgaaggagaatttgaatcgagtctgttttgttgtagttaaaaagttgtcacttcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12507" stop="14187"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12807" g_stop="12821" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.759" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12922" g_stop="13280" g_length="359"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="374" r_length="359" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13621" g_stop="13887" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="641" r_length="267" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E327166" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>641</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12807" e_stop="12821"/>
          <exon e_start="12922" e_stop="13280"/>
          <exon e_start="13621" e_stop="13887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGTTCGATTACAGGTAACAGTCAGACCTCTTTATAACAACATCGTTTGTCTAGATAGTTTTGATACTCATTTTAGTGGGAGACTAATCGTTGTTACTGAAAATCAAATATCAGGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGT</genome_strand>
        <mrna_strand>TTGGTTCGATTACAG....................................................................................................GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E725605" ref_strand="+" ref_description="SGN-E725605 [LA04AG11]">
      <seq>ggaaacacaaacacattggctggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaaagcttacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgactaccacgaagagactggcatcacatttgcctccttataccctggctgcatcgcgacaacagggctattcagggagcatatccccttgtttaggctcctttttccttccattccagaagtttatcaccaaaggattcgtctccgaggcagaatctggaaagagacttgcacaggtaatatttattagtgtcagtttcacgtataaccactgaactttatccattatacagtaaccgntaagataagatacctggcctaactcaatctcaaagttagctcgtgaggagaggattgctcgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12621" stop="13709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12921" g_stop="13409" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="489" r_length="489" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E725605" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E725605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12921" e_stop="13409"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGA-TACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCC-TTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAG</genome_strand>
        <mrna_strand>GGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGACTACCACGAAGAGACTGGCATCACATTTGCCTCCTTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTTCCTTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCATTAT-ACAGTAACCGNTAAGATAAGATACCTGGCCTAACTCAATCTC-AAAGTTAGCTCGTGAGGAGAGGATTGCTCGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E371330" ref_strand="+" ref_description="SGN-E371330 [TUS-27-A21]">
      <seq>ggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaaagcttacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaagagactggcatcacatttgcctccctataccctggctgcatcgcgacaacagggctattcagggagcatatccccttgtttaggctccttttccctccattccagaagtttatcaccaaaggattcgtctccgaggcagaatctggaaagagacttgcacaggttgttagtgatccaagtcttacaaaatcaggtgtgtactggagctggaacaagaactcttcctcctttgagaaccagttgtcagaagaagctagtgacgttgagaaagcgcgtaaagtgtgggaagtcagtgagaaactcgtgggattggcttagattttttgctgattgagttcaaccatcaccaagacgaacacgaaaaaggagttgatgaaggagaatttgaatcgagtctgttttgttgtagttaaaaagttgtcacttcgtaaaatttttgagttaggaataaatatcattcatccttttagaatcgagcgcttaccaacacgccaacaattatagcgctcacaacttttagtccacccnaacagcgtcatgttcgatcaatgactcactcaacattttccagtatgaatgatcatgtgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12642" stop="14348"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12942" g_stop="13280" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="339" r_length="339" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13621" g_stop="14048" g_length="428"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="767" r_length="428" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E371330" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>767</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371330" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12942" e_stop="13280"/>
          <exon e_start="13621" e_stop="14048"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAGAATCGAGCGCTTACCAACACGCCAACAATTATAGCGCTCACAACTTTAAGTCCACCCAACAAGCGTCATGTTCGATCAATGACTCACTCAACAATTTCCAGTATGAATGATCATGTGAAT</genome_strand>
        <mrna_strand>GGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAGAATCGAGCGCTTACCAACACGCCAACAATTATAGCGCTCACAACTTTTAGTCCACCCNAACAGCGTCATGTTCGATCAATGACTCACTCAACATTTTCCAGTATGAATGATCATGTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E268380" ref_strand="+" ref_description="SGN-E268380 [cLEI-13-I18]">
      <seq>ggaaatgtacctccaaaggccaacctcggggacttgaggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaaagcttacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaagagactggcatcacatttgcctccctataccctggctgcatcgcgacaacagggctattcagggagcatatccccttgtttaggctccttttccctccattccagaagtttatcaccaaaggattcgtctccgaggcagaatctggaaagagacttgcacaggttgttagtgatccaagtcttacaaaatcaggtgtgtactggagctggaacaagaactcttcctcctttgagaaccagttgtcagaagaagctagtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12642" stop="14018"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12942" g_stop="13280" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="339" r_length="339" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13621" g_stop="13718" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="437" r_length="98" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E268380" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E268380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12942" e_stop="13280"/>
          <exon e_start="13621" e_stop="13718"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGA</genome_strand>
        <mrna_strand>GGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E288365" ref_strand="-" ref_description="SGN-E288365 [cLES-16-I5]">
      <seq>aggggtttagcaagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaaagcttacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaagagactggcatcacatttgcctccctataccctggctgcatcgcgacaacagggctattcagggagcatatccccttgtttaggctccttttccctccattccagaagtttatcaccaaaggattcgtctccgaggcagaatctggaaagagacttgcacaggttgttagtgatccaagtcttacaaaatcaggtgtgtactggagctggaacaagaactcttcctcctttgagaaccagttgtcagaagaagctagtgacgttgagaaagcgcgtaaagtgtgggaagtcagtgagaaactcgtgggattggcttagattttttgctgattgagttcaaccatcaccaagacgaacacgaaaaaggagttgatgaaggagaatttgaatcgagtctgttttgttgtagttaaaaagttgtcacttcgtaaaatttttgagttaggaataaatatcattcatccttttaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12678" stop="14230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12978" g_stop="13280" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13621" g_stop="13934" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="617" r_length="314" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E288365" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288365" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="12978" e_stop="13280"/>
          <exon e_start="13621" e_stop="13934"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAGAATCGA</genome_strand>
        <mrna_strand>AGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E469979" ref_strand="+" ref_description="SGN-E469979 [cSTB-16-G19]">
      <seq>ggggtttggcaagagggctcgatggacttaacagctcggccatgattgatggtggtgactttgatggtgccaaagcatacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaggagactggcatcacatttgcctctctataccctggctgcatcgcgacaacagggctatttagagaacatatccccttgtttaggctacttttccctccattccagaagtttattaccaagggattcgtctccgaggcagaatctggaaagagacttgcacaggttgtaagtgatccaagtctaacaaaatcaggagtgtactggagctggaacaagaactcttcttcttttgagaatcagttgtcagaagaagccagtgacgttgagaaagcgcgtaaagtgtgggaagtcagtgagaaactcctcgggttggcttagattttgcggattgagttcaaccatcgccaagacgaacaagaaaagggagttgatgaacgagaatttaaatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12679" stop="14149"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12979" g_stop="13280" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="302" r_length="302" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13621" g_stop="13849" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="529" r_length="227" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E469979" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E469979" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12979" e_stop="13280"/>
          <exon e_start="13621" e_stop="13849"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATC</genome_strand>
        <mrna_strand>GGGGTTTGGCAAGAGGGCTCGATGGACTTAACAGCTCGGCCATGATTGATGGTGGTGACTTTGATGGTGCCAAAGCATACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAGGAGACTGGCATCACATTTGCCTCTCTATACCCTGGCTGCATCGCGACAACAGGGCTATTTAGAGAACATATCCCCTTGTTTAGGCTACTTTTCCCTCCATTCCAGAAGTTTATTACCAAGGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTAAGTGATCCAAGTCTAACAAAATCAGGAGTGTACTGGAGCTGGAACAAGAACTCTTCTTCTTTTGAGAATCAGTTGTCAGAAGAAGCCAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCCTCGGGTTGGCTTAGA--TTTTGCGGATTGAGTTCAACCATCGCCAAGACGAACAAGAAAAGGGAGTTGATGAACGAGAATTTAAATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E288515" ref_strand="+" ref_description="SGN-E288515 [cLES-8-B6]">
      <seq>aagggggctcgatggacttaacagctcagccatgattgacggtggtgactttgatggtgccaaagcttacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaagagactggcatcacatttgcctccctataccctggctgcatcgcgacaacagggctattcagggagcatatccccttgtttaggctccttttccctccattccagaagtttatcaccaaaggattcgtctccgaggcagaatctggaaagagacttgcacaggttgttagtgatccaagtcttacaaaatcaggtgtgtactggagctggaacaagaactcttcctcctttgagaaccagttgtcagaagaagctagtgacgttgagaaagcgcgtaaagtgtgggaagtcagtgagaaactcgtgggattggcttagattttttgctgattgagttcaaccatcaccaagacgaacacgaaaaaggagtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12689" stop="14129"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12989" g_stop="13280" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="292" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13621" g_stop="13829" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="293" r_stop="501" r_length="209" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E288515" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288515" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12989" e_stop="13280"/>
          <exon e_start="13621" e_stop="13829"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTT</genome_strand>
        <mrna_strand>AAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E415960" ref_strand="-" ref_description="SGN-E415960 [STM-22-C2]">
      <seq>caaagcatacaaagacagcaaggtttgcaatatgctcactatgcaggaattccatagacgataccacgaggacactggcatcacatttgcctctctataccctggctgcattgcgacaacagggctattcagagagcatatccccttgtttaggctacttttccctccattccagaagtttattaccaagggattcgtctccgaggcagaatctggaaagagacttgcacaggttgtaagtgatccaagtctaacaaaatcaggagtgtactggagctggaacaagaactcttcttcttttgagaatcagttgtcagaagaagccagtgacgttgagaaagcgcgtaaagtgtgggaagtcagtgagaaactcgtggggttggcttagattttgcggattgagttcaaccatcaccaagacgaacaagaaaagggagttgatgagggagaatttgaatcaagagtctgttttgttgtagttaagagttgtcactttgtaaaaattttgagttgggaataaatatcaatctatcctgttttcttcgaaaaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12749" stop="14226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13049" g_stop="13280" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="232" r_length="232" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13621" g_stop="13909" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="520" r_length="288" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E415960" ref_strand="-">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>521</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E415960" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="13049" e_stop="13280"/>
          <exon e_start="13621" e_stop="13909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATC--GAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAA</genome_strand>
        <mrna_strand>CAAAGCATACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAGGACACTGGCATCACATTTGCCTCTCTATACCCTGGCTGCATTGCGACAACAGGGCTATTCAGAGAGCATATCCCCTTGTTTAGGCTACTTTTCCCTCCATTCCAGAAGTTTATTACCAAGGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTAAGTGATCCAAGTCTAACAAAATCAGGAGTGTACTGGAGCTGGAACAAGAACTCTTCTTCTTTTGAGAATCAGTTGTCAGAAGAAGCCAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGGTTGGCTTAGA--TTTTGCGGATTGAGTTCAACCATCACCAAGACGAACAAGAAAAGGGAGTTGATGAGGGAGAATTTGAATCAAGAGTCTGTTTTGTTGTAGTT-AAGAGTTGTCACTTTGTAAAAATTTTGAGTTGGGAATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E747193" ref_strand="+" ref_description="SGN-E747193 [GI|9049762]">
      <seq>tttccctccatccagaagtttatcaccaaaggattcgtctccgaggcagaatctggaaagagacttgcacaggttgttagtgatccaagtcttacaaaatcaggtgtgtactggagctggaacaagaactcttcctcctttgagaaccagttgtcagaagaagctagtgacgttgagaaagcgcgtaaagtgtgggaagtcagtgagaaactcgtgggattggcttagattttctgctgattgagttcaaccatcaccaagacgaacacgaaaaaggagttgatgaaggagaatttgaatcgagtctgttttgttgtagttaaaaagttgtcacttcgtaaaatttttgagttaggaataaatatcattcatccttttagaaaaaaaaagaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12908" stop="75334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13208" g_stop="13280" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13621" g_stop="13934" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="386" r_length="314" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13935" i_stop="14066" i_length="132">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14067" g_stop="14096" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="416" r_length="30" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E747193" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>417</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747193" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13208" e_stop="13280"/>
          <exon e_start="13621" e_stop="13934"/>
          <exon e_start="14067" e_stop="14096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAGTCTATATTAGGAGAGCACCAATCCATTCATCAACCAATGTGAGACTTTTATTCACTCTAACACTCCCCTTCACGCCCATGCCCAACTGAAGCGTAGACTGGGAGCCCAAAGAGGGATACCATGTAAAGATGATTTTAGGCCTAACCAAGAAACTAATTTTTGTCACACTAAAGTTACTAAACATAAGATGTTGTTTGTTTGTTATTTACAGGTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAGAATCGAGCGCTTACCAACACGCCAACAATTATAGCGCTCACAACTTTAAGTCCACCCAACAAGCGTCATGTTCGATCAATGACTCACTCAACAATTTCCAGTATGAATGATCATGTGAATTATGATTCCGTATTCACTACATAAAAACAAAAATTAGCAACAAACAAC</genome_strand>
        <mrna_strand>TTTCCCTCCA-TCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG....................................................................................................................................................................................................................................................................................................................................................GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTCTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAGAAAAAA....................................................................................................................................AAAGAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E316046" ref_strand="+" ref_description="SGN-E316046 [cTOA-23-K6]">
      <seq>ttgaatacggaatcataattcacatgatcattcatactggaaattgttgagtgagtcattgatcgaacatgacgcttgttgggtggacttaaagttgtgagcgctataattgttggcgtgttggtaagcgctcgattctaaaaggatgaatgatatttattcctaactcaaaaattttacgaagtgacaactttttaactacaacaaaacagactcgattcaaattctccttcatcaactcctttttcgtgttcgtcttggtgatgggtgaactcaatcagcaaaaaatctaagccaatcccacgagtttctcactgacttcccacactttacgcgctttctcaacgtcactaacttcttctgacaactgggtctcaaaggaggaagagatcttgttccagctccagtacacacctgattttgtaagaattggatcactaacaacctgtgcaagtctctttccagattctgcctcggagacgaatcctttggtgataaacttctggaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14364" stop="12916"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14124" g_stop="14124" g_length="1"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1" r_length="1" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14123" i_stop="14065" i_length="59">
            <donor d_prob="0.359" d_score="0.00"/>
            <acceptor a_prob="0.841" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14064" g_stop="13619" g_length="446"/>
          <reference_exon_boundary r_type="cDNA" r_start="2" r_stop="447" r_length="446" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13618" i_stop="13279" i_length="340">
            <donor d_prob="0.904" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13278" g_stop="13216" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="510" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E316046" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>510</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E316046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14124" e_stop="14124"/>
          <exon e_start="14064" e_stop="13619"/>
          <exon e_start="13278" e_stop="13216"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTAGCTCTTATATAGAACTCAACAGAAGTTGTTTGTTGCTAATTTTTGTTTTTATGTAGTGAATACGGAATCATAATTCACATGATCATTCATACTGGAAATTGTTGAGTGAGTCATTGATCGAACATGACGCTTGTTGGGTGGACTTAAAGTTGTGAGCGCTATAATTGTTGGCGTGTTGGTAAGCGCTCGATTCTAAAAGGATGAATGATATTTATTCCTAACTCAAAAATTTTACGAAGTGACAACTTTTTAACTACAACAAAACAGACTCGATTCAAATTCTCCTTCATCAACTCCTTTTTCGTGTTCGTCTTGGTGATGGTTGAACTCAATCAGCAAAAAATCTAAGCCAATCCCACGAGTTTCTCACTGACTTCCCACACTTTACGCGCTTTCTCAACGTCACTAGCTTCTTCTGACAACTGGTTCTCAAAGGAGGAAGAGTTCTTGTTCCAGCTCCAGTACACACCTGATTTTGTAAGACTTGGATCACTAACAACCTGTAAATAACAAACAAACAACATCTTATGTTTAGTAACTTTAGTGTGACAAAAATTAGTTTCTTGGTTAGGCCTAAAATCATCTTTACATGGTATCCCTCTTTGGGCTCCCAGTCTACGCTTCAGTTGGGCATGGGCGTGAAGGGGAGTGTTAGAGTGAATAAAAGTCTCACATTGGTTGATGAATGGATTGGTGCTCTCCTAATATAGACTCGAGCAATCCTCTCCTCACGAGCTAACTTTTGAGATTGAGTTAGGCCAGGTATCTTATCTTTACGGTTACTGTTATAGTGGATAAAGTTCAGTGGTTATACGTGAAACTGACACTAATAAATATTACCTGTGCAAGTCTCTTTCCAGATTCTGCCTCGGAGACGAATCCTTTGGTGATAAACTTCTGGAATG</genome_strand>
        <mrna_strand>T...........................................................TGAATACGGAATCATAATTCACATGATCATTCATACTGGAAATTGTTGAGTGAGTCATTGATCGAACATGACGCTTGTTGGGTGGACTTAAAGTTGTGAGCGCTATAATTGTTGGCGTGTTGGTAAGCGCTCGATTCTAAAAGGATGAATGATATTTATTCCTAACTCAAAAATTTTACGAAGTGACAACTTTTTAACTACAACAAAACAGACTCGATTCAAATTCTCCTTCATCAACTCCTTTTTCGTGTTCGTCTTGGTGATGGGTGAACTCAATCAGCAAAAAATCTAAGCCAATCCCACGAGTTTCTCACTGACTTCCCACACTTTACGCGCTTTCTCAACGTCACTAACTTCTTCTGACAACTGGGTCTCAAAGGAGGAAGAGATCTTGTTCCAGCTCCAGTACACACCTGATTTTGTAAGAATTGGATCACTAACAACCT....................................................................................................................................................................................................................................................................................................................................................GTGCAAGTCTCTTTCCAGATTCTGCCTCGGAGACGAATCCTTTGGTGATAAACTTCTGGAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E713019" ref_strand="+" ref_description="SGN-E713019 [FB06CA04]">
      <seq>cacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaacattagaaatgattcagcttattcgatgacaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16645" stop="13978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16345" g_stop="16319" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="271" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="392" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14271" g_length="368"/>
          <reference_exon_boundary r_type="cDNA" r_start="393" r_stop="760" r_length="368" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E713019" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16345" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14271"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGACATATTCGAGC</genome_strand>
        <mrna_strand>CACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGACAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E407900" ref_strand="+" ref_description="SGN-E407900 [PPI-8-N4]">
      <seq>gttgctttgggttcagatggtggggtgaagttattttggggcattgcagctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccacagtgagaaaggactaatgaatttcgagcatccgatgaacaagatgagggccatgccaagagtagatagtgaaggggtaatgtgtggagctaacttcaaagtggatatgtattcaagagttaacagcatccctagagttggcagtgaagctaactggtctgattggaacacttcttactaagtcgattctccgcgattttcaaacttcctttagtgtttcttctgttttcgttcaattttcgagtttgttttaggtttggtttcttccctgtacgtgctttgcacctgtgtataacgcttggaaaataaatgaaacattagaaatgattcagctttgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15234" stop="13991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="130" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14638" g_stop="14277" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="492" r_length="362" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E407900" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E407900" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14277"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGACATAT</genome_strand>
        <mrna_strand>GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCAGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCACAGTGAGAAAGGACTAATGAATTTCGAGCATCCGATGAACAAGATGAGGGCCATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCTAACTTCAAAGTGGATATGTATTCAAGAGTTAACAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGATTGGAACACTTCTTACTAAGTCGATTCTCCGCGATTTTCAAACTTCCTTTAGTGTTTCTTCTGTTTTCGTTCAATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTCCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGGAAAATAAATGAAACATTAGAAATGATTCAGCTTTGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E421449" ref_strand="+" ref_description="SGN-E421449 [STM-32-L20]">
      <seq>gttgctttgggttcagatggtggggtgaagttattttggggcattgcagctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccacagtgagaaaggactaatgaatttcgagcatccgatgaacaagatgagggccatgccaagagtagatagtgaaggggtaatgtgtggagctaacttcaaagtggatatgtattcaagagttaacagcatccctagagttggcagtgaagctaactggtctgattggaacacttcttactaagtcgattctccgcgattttcaaacttcctttagtgtttcttctgttttcgttcaattttcgagtttgttttaggtttggtttcttccctgtacgtgctttgcacctgtgtataacgcttggaaaataaatgaaacattagaaatgattcagctttgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15234" stop="13991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="130" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14638" g_stop="14277" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="492" r_length="362" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E421449" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E421449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14277"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGACATAT</genome_strand>
        <mrna_strand>GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCAGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCACAGTGAGAAAGGACTAATGAATTTCGAGCATCCGATGAACAAGATGAGGGCCATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCTAACTTCAAAGTGGATATGTATTCAAGAGTTAACAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGATTGGAACACTTCTTACTAAGTCGATTCTCCGCGATTTTCAAACTTCCTTTAGTGTTTCTTCTGTTTTCGTTCAATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTCCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGGAAAATAAATGAAACATTAGAAATGATTCAGCTTTGAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E421450" ref_strand="-" ref_description="SGN-E421450 [STM-32-L20]">
      <seq>gttgctttgggttcagatggtggggtgaagttattttggggcattgcagctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccacagtgagaaaggactaatgaatttcgagcatccgatgaacaagatgagggccatgccaagagtagatagtgaaggggtaatgtgtggagctaacttcaaagtggatatgtattcaagagttaacagcatccctagagttggcagtgaagctaactggtctgattggaacacttcttactaagtcgattctccgcgattttcaaacttcctttagtgtttcttctgttttcgttcaattttcgagtttgttttaggtttggtttcttccctgtacgtgctttgcacctgtgtataacgcttggaaaataaatgaaacattagaaatgattcagcttgaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15234" stop="13991"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="130" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14638" g_stop="14278" g_length="361"/>
          <reference_exon_boundary r_type="cDNA" r_start="131" r_stop="491" r_length="361" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E421450" ref_strand="-">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>482</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E421450" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGACATA</genome_strand>
        <mrna_strand>GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCAGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCACAGTGAGAAAGGACTAATGAATTTCGAGCATCCGATGAACAAGATGAGGGCCATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCTAACTTCAAAGTGGATATGTATTCAAGAGTTAACAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGATTGGAACACTTCTTACTAAGTCGATTCTCCGCGATTTTCAAACTTCCTTTAGTGTTTCTTCTGTTTTCGTTCAATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTCCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGGAAAATAAATGAAACATTAGAAATGATTCAGCTTGAAAAAAAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E276866" ref_strand="-" ref_description="SGN-E276866 [cLEN-14-J23]">
      <seq>ttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtggtaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttaataagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaacattagaaatgattcagcttattcgatgaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15703" stop="13978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15403" g_stop="15330" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="74" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="75" r_stop="195" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14281" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="553" r_length="358" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="554" polyA_stop="572"/>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E276866" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276866" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15403" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGAC</genome_strand>
        <mrna_strand>TTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGGTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTAATAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E274725" ref_strand="-" ref_description="SGN-E274725 [cLEN-13-J23]">
      <seq>actgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaacattagaaatgattcagcttattcgatgaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15234" stop="13978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="139" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14638" g_stop="14281" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="497" r_length="358" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="498" polyA_stop="516"/>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E274725" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>479</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274725" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14281"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGAC</genome_strand>
        <mrna_strand>GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E715555" ref_strand="+" ref_description="SGN-E715555 [FB14CE05]">
      <seq>gtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaacattagaaatgattcgtcttataaagaaaaaaatgaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15223" stop="13989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14923" g_stop="14813" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14638" g_stop="14291" g_length="348"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="459" r_length="348" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E715555" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="0.952" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715555" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14923" e_stop="14813"/>
          <exon e_start="14638" e_stop="14291"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTT</genome_strand>
        <mrna_strand>GTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCGTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E397455" ref_strand="-" ref_description="SGN-E397455 [TUS-45-D10]">
      <seq>caaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccaggtgatcaagttattaaggattttgaaggaagttttgcttttgttatttatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttttgatgaagtagaggttattaaagctggatgtggtaagtcatttgcaccctttcccccaggttgtatgttccatagtgagaaaggactaatgaatttcgagcccccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaaggtaactggtttgactggaacactttttactaagtcgattttttgcaattttcaaacttcctttagtgtttgttttgttttggttagattttcgagtttgttttaggtttggtttttttcctgtacgtgctttgcccctgtgtataacgcttgaaaaataaatgaaacctttgaaatgaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15784" stop="13999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15484" g_stop="15330" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="276" r_length="121" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.940" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14300" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="615" r_length="339" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="616" polyA_stop="639"/>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E397455" ref_strand="-">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397455" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15484" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATG</genome_strand>
        <mrna_strand>CAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGGTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATTTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTTTGATGAAGTAGAGGTTATTAAAGCTGGATGTGGTAAGTCATTTGCACCCTTTCCCCCAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCCCCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGGTAACTGGTTTGACTGGAACACTTTTTACTAAGTCGATTTTTTGCAATTTTCAAACTTCCTTTAGTGTTTGTTTTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTTTTTCCTGTACGTGCTTTGCCCCTGTGTATAACGCTTGAAAAATAAATGAAACCTTTGAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E397335" ref_strand="-" ref_description="SGN-E397335 [TUS-45-D9]">
      <seq>gaaggggtaatgggtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaaggtaactggtttgactggaacactttttactaagtcgattttttgcaattttcaaacttcctttagtgtttgttttgttttggttagattttcgagtttgttttaggtttggtttttttcctgtacgtgctttgcacctgtaaagaacgcttgaaaaataaatgaaacattagaaatgaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14855" stop="13999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14555" g_stop="14300" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="256" r_length="256" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="257" polyA_stop="280"/>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E397335" ref_strand="-">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>256</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397335" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14555" e_stop="14300"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATG</genome_strand>
        <mrna_strand>GAAGGGGTAATGGGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGGTAACTGGTTTGACTGGAACACTTTTTACTAAGTCGATTTTTTGCAATTTTCAAACTTCCTTTAGTGTTTGTTTTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTTTTTCCTGTACGTGCTTTGCACCTGTAAAGAACGCTTGAAAAATAAATGAAACATTAGAAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E253978" ref_strand="-" ref_description="SGN-E253978 [cLEG-28-N24]">
      <seq>aggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaacattaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15875" stop="14004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15575" g_stop="15330" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="367" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14304" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="368" r_stop="702" r_length="335" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E253978" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>702</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253978" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15575" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</genome_strand>
        <mrna_strand>AGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E261248" ref_strand="-" ref_description="SGN-E261248 [cLEG-68-G23]">
      <seq>atgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaacattaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15856" stop="14004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15556" g_stop="15330" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="348" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14304" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="349" r_stop="683" r_length="335" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E261248" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E261248" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15556" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</genome_strand>
        <mrna_strand>ATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E253728" ref_strand="-" ref_description="SGN-E253728 [cLEG-32-M1]">
      <seq>catggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaacattaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15837" stop="14004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15537" g_stop="15330" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="329" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14304" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="664" r_length="335" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E253728" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>664</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253728" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15537" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</genome_strand>
        <mrna_strand>CATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E256652" ref_strand="-" ref_description="SGN-E256652 [cLEG-40-I1]">
      <seq>tgctagtccattgaagccttacaggnacacttagagacaggggactcttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaacattaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15763" stop="14004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15463" g_stop="15330" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="138" r_length="138" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="139" r_stop="259" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14304" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="594" r_length="335" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E256652" ref_strand="-">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E256652" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15463" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTAGT-CATTGAAGCC-TACAGG-ACACTTAGAGACAGGGGAC-CTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</genome_strand>
        <mrna_strand>TGCTAGTCCATTGAAGCCTTACAGGNACACTTAGAGACAGGGGACTCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254415" ref_strand="-" ref_description="SGN-E254415 [cLEG-27-B17]">
      <seq>atccagctgatcaagttattaaggattttgaaggaagtttagcttttgttatctatgatagtaaagctccacctgtatttgtagctttgggttcagatggtcgggtaaagttattttggggtatcgccgctgatgcatctgtggtaatttctcatgatgtagaggttattaaagctgtatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaccaagatgagggctatgccaagagtacatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctatagttggcagtgaagctaactggtctgactggtcacacttcttactaagtcgattctctgcaattttcaaacttcctccagtgtgtgctctgctatggttagattttcgagtctgcattaggatcggcttctttcctgtacgtgctttgcacctgtgcataacgcttgaagaataaatgaaccattaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15718" stop="14004"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15418" g_stop="15330" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.88"/>
            <acceptor a_prob="0.994" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="210" r_length="121" r_score="0.934"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14304" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="546" r_length="336" r_score="0.937"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E254415" ref_strand="-">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254415" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15418" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGG-AACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGA</genome_strand>
        <mrna_strand>ATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTAGCTTTTGTTATCTATGATAGTAAAGCTCCACCTGTATTTGTAGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTCGGGTAAAGTTATTTTGGGGTATCGCCGCTGATGCATCTGTGGTAATTTCTCATGATGTAGAGGTTATTAAAGCTGTATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGACCAAGATGAGGGCTATGCCAAGAGTACATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTATAGTTGGCAGTGAAGCTAACTGGTCTGACTGGTCACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTCCAGTGTGTGCTCTGCTATGGTTAGATTTTCGAGTCTGCATTAGGATCGGCTTCTTTCCTGTACGTGCTTTGCACCTGTGCATAACGCTTGAAGAATAAATGAACCATTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E251552" ref_strand="-" ref_description="SGN-E251552 [cLEG-9-I12]">
      <seq>agctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaatgaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15714" stop="14010"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15414" g_stop="15330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="206" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14310" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="535" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E251552" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251552" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15414" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAAC</genome_strand>
        <mrna_strand>AGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E711125" ref_strand="+" ref_description="SGN-E711125 [FB01AD03]">
      <seq>cacttgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtggttgttctgttttggttagattttcgagtttgttttaagtttgggttctttcctgtacgtgctttgcacctgtgtataacgcttgaaaaataaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16823" stop="14015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16528" g_stop="16319" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="453" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="454" r_stop="574" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14315" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="575" r_stop="898" r_length="324" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E711125" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>899</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16528" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAAT</genome_strand>
        <mrna_strand>CACT-TGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGGTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAAGTTTGGGTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E210973" ref_strand="+" ref_description="SGN-E210973 [cLEC-69-B16]">
      <seq>tcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaattttcaaacttcctttagtgtttgttctgttttggttagattttcgagtttgttttaggtttggtttctttcctgtacgtgctttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16724" stop="14044"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16424" g_stop="16319" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="350" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="471" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14344" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="766" r_length="295" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E210973" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210973" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16424" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTG</genome_strand>
        <mrna_strand>TCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E262498" ref_strand="+" ref_description="SGN-E262498 [cLEG-56-L24]">
      <seq>tcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaataacatccctagaattggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctctgcaaatttcaaacttcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16724" stop="14115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16424" g_stop="16319" g_length="106"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="106" r_length="106" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="107" r_stop="350" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="351" r_stop="471" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14415" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="695" r_length="224" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E262498" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262498" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16424" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14415"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTT</genome_strand>
        <mrna_strand>TCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAACATCCCTAGAATTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAAATTTCAAACTTCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E259703" ref_strand="-" ref_description="SGN-E259703 [cLEG-42-F5]">
      <seq>agctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttgatttattgctgatgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgcacaagatgagggctatgccaagagttgatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccttagagttggcagtgaagctaactgttttgactggaacacttcttactaagtcgattatatgtcaattttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15714" stop="14124"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15414" g_stop="15330" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="206" r_length="121" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14424" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="422" r_length="216" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E259703" ref_strand="-">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>421</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259703" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="15414" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14424"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTG-CAATTTTCA</genome_strand>
        <mrna_strand>AGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGATTTATTGCTGATGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGCACAAGATGAGGGCTATGCCAAGAGTTGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCTTAGAGTTGGCAGTGAAGCTAACTGTTTTGACTGGAACACTTCTTACTAAGTCGATTATATGTCAATTTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E457479" ref_strand="+" ref_description="SGN-E457479 [cPRO-2-H4]">
      <seq>cttgaagctaaaaaagagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacacttcaaaaattcatctcgactcgtccatttgatacctcttatgttacctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttctttgctcaatcacacacaaacgtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttatgtgcacaaatcaaacaatatgggctatcacctaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgtcatctatgatagtaagacgggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggcattgctgctgatggatctgtggtgatttctgatgatgtagaggtcattaaagctggctgtgctaagtcatttgcaccctttcccacaggttgtatgttccacagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggccatgccaagagtagatagtgaaggggtaatgtgtggagctaacttcaaagtggatatgtattccagagttacagcatccctagagttggcagtgaagctaactggtctgatggaacacttcttactaagtcgattctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16838" stop="14134"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16547" g_stop="16319" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="0.900"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="473" r_length="244" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="594" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.940" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14434" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="797" r_length="203" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E457479" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E457479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16547" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCT</genome_strand>
        <mrna_strand>CTTGAAGCTAAAAAAGAGATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACACTTCAAAAATTCATCTCGACTCGTCCATTTGATACCTCTTATGTTACCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCTTTGCTCAATCACACACAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTATGTGCACAAATCAAACAATATGGGCTATCACCTAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTCATCTATGATAGTAAGACGGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTCATTAAAGCTGGCTGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCACAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCCATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCTAACTTCAAAGTGGATATGTATTCCAGAGTT-ACAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGA-TGGAACACTTCTTACTAAGTCGATTCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E262242" ref_strand="+" ref_description="SGN-E262242 [cLEG-56-A20]">
      <seq>aaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcgatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctaaagttggcagtgaagctaactggtctgactggaacacttcttactaagtcgattctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16846" stop="14135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16546" g_stop="16319" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="472" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="592" r_length="120" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14435" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="593" r_stop="796" r_length="204" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E262242" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>797</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262242" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16546" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTC</genome_strand>
        <mrna_strand>AAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTC-GATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAAAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E402534" ref_strand="+" ref_description="SGN-E402534 [PPC-8-A23]">
      <seq>aaaaagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttcctcaacaaacactacaaaaattcatctcgactcgtccatttgacacctcttatgttagctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttccttgctcaatcacacacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttatgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaagactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggcattgcagctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccacagtgagaaaggactaatgaatttcgagcatccgatgaacaagatganggccatgccaagagtagatagtgaaggggtaatgtgtggagctaacttcaaagtggatatgtattcaagagttaacagcatccctagagttggcagtgaagctaactggtctgattggaacacttcttactaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16835" stop="14143"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16535" g_stop="16319" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="461" r_length="244" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="582" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14443" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="778" r_length="196" r_score="0.964"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E402534" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>778</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E402534" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16535" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14443"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGT</genome_strand>
        <mrna_strand>AAAAAGATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCTCAACAAACACTACAAAAATTCATCTCGACTCGTCCATTTGACACCTCTTATGTTAGCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCCTTGCTCAATCACACACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTATGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAGACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCAGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCACAGTGAGAAAGGACTAATGAATTTCGAGCATCCGATGAACAAGATGANGGCCATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCTAACTTCAAAGTGGATATGTATTCAAGAGTTAACAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGATTGGAACACTTCTTACTAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E276111" ref_strand="+" ref_description="SGN-E276111 [cLEN-12-P3]">
      <seq>tttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagccaacttcaaagtggatatgtattcaagagttaatagcatccctagagttggcagtgaagctaactggtctgactggaacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15870" stop="14155"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="15570" g_stop="15330" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="362" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14638" g_stop="14455" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="546" r_length="184" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E276111" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276111" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="15570" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14455"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACAC</genome_strand>
        <mrna_strand>TTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E214027" ref_strand="+" ref_description="SGN-E214027 [cLEC-80-P2]">
      <seq>aaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtggagcccacttcaaagtggatatgtattcaagagttatagcatccctagaagtggcagtgaagctaactggtctgactgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16806" stop="14159"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16506" g_stop="16319" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="188" r_length="188" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="189" r_stop="432" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="553" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14459" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="554" r_stop="732" r_length="179" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E214027" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E214027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16506" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14459"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGA</genome_strand>
        <mrna_strand>AAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCCACTTCAAAGTGGATATGTATTCAAGAGTT-ATAGCATCCCTAGAAGTGGCAGTGAAGCTAACTGGTCTGACTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E464095" ref_strand="+" ref_description="SGN-E464095 [cPRO-16-P22]">
      <seq>tgaagctaaaaaaagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttcctcaacaaacacttcaaaaattcatctcgactcgtccatttgacacctcttatgttacctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttccttgctcaatcacacacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaagactggaacagtatttgttgctttgggttcagatggtggggtgaagttattttggggcattgcagctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccacagtgagaaaggactaatgaatttcgagcatccgatgaacaagatgagtgccatgccaagagtagatagtgaaggggtaatgtgtggagctaacttcaaagtggatatgtattcaagagttaacagcatcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16837" stop="14195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16544" g_stop="16319" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="470" r_length="244" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.96"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="591" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14495" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="735" r_length="144" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E464095" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E464095" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16544" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCC</genome_strand>
        <mrna_strand>TGAAGCTAAAAAAAGATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCTCAACAAACACTTCAAAAATTCATCTCGACTCGTCCATTTGACACCTCTTATGTTACCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCCTTGCTCAATCACACACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAGACTGGAACAGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCAGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCACAGTGAGAAAGGACTAATGAATTTCGAGCATCCGATGAACAAGATGAGTGCCATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCTAACTTCAAAGTGGATATGTATTCAAGAGTTAACAGCATCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E699355" ref_strand="+" ref_description="SGN-E699355 [FA09DA05]">
      <seq>cgttcatcttgaagctaaaaaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaaaaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggaaatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttaaagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcaaatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtaaaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaaaatgagggctatgcccaaaagtaaatagtgaaggggtaatgtgtggaccccacttcaaagtggatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16864" stop="14218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16566" g_stop="16319" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="492" r_length="244" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="613" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14518" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="735" r_length="122" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E699355" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>734</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16566" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14518"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATG-CCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATAT</genome_strand>
        <mrna_strand>CGTTCATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAAAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAAATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAAAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAAATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAAAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAAATGAGGGCTATGCCCAAAAGTAAATAGTGAAGGGGTAATGTGTGGACCCCACTTCAAAGTGGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E375256" ref_strand="+" ref_description="SGN-E375256 [TUS-34-J7]">
      <seq>aacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaaggggtaatgtgtgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16844" stop="14239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16544" g_stop="16319" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="470" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="591" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14539" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="592" r_stop="691" r_length="100" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E375256" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>691</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375256" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16544" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGG</genome_strand>
        <mrna_strand>AACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254402" ref_strand="+" ref_description="SGN-E254402 [cLEG-27-I14]">
      <seq>aaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaagactaatgaatttcgagcacccgatgaacaagatgagggctatgccaagagtagatagtgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16835" stop="14253"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16535" g_stop="16319" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="461" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="582" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14553" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="668" r_length="86" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E254402" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254402" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16535" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14553"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAA</genome_strand>
        <mrna_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAAGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E699226" ref_strand="+" ref_description="SGN-E699226 [FA09AG07]">
      <seq>ccattttgaagctaaaaaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaaaaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggaaatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttggggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacccttaaagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagaaaaactggaactgtatttgttgctttgggttcaaatgggggggggaagttattttggggtattgctgctgatggatctggggggatttctgatgatgtaaaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagggaaaaaggactaatgaatttcgaccacccaatgaaacaaaatgagggctatgcccaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16862" stop="14267"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16563" g_stop="16319" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="245" r_length="245" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="489" r_length="244" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="610" r_length="121" r_score="0.950"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.940" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14565" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="611" r_stop="685" r_length="75" r_score="0.878"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E699226" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699226" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16563" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATG-AACAAGATGAGGGCTATGCCAAGA</genome_strand>
        <mrna_strand>CCATTTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAAAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAAATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGGGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACCCTTAAAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGAAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAAATGGGGGGGGGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGGGGGGATTTCTGATGATGTAAAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGGGAAAAAGGACTAATGAATTTCGACCACCCAATGAAACAAAATGAGGGCTATGCCCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E210606" ref_strand="+" ref_description="SGN-E210606 [cLEC-68-K3]">
      <seq>aaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaacaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16835" stop="14283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16535" g_stop="16319" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="461" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="582" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14583" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="638" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E210606" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E210606" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16535" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAG</genome_strand>
        <mrna_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E253810" ref_strand="+" ref_description="SGN-E253810 [cLEG-28-I10]">
      <seq>aaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacccgatgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16829" stop="14286"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16529" g_stop="16319" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="455" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="576" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14586" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="629" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E253810" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E253810" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16529" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAAC</genome_strand>
        <mrna_strand>AAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254813" ref_strand="+" ref_description="SGN-E254813 [cLEG-33-K20]">
      <seq>ctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaagactaatgaatttcgagcacccgatgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16769" stop="14286"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16469" g_stop="16319" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="395" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="516" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14586" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="517" r_stop="569" r_length="53" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E254813" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16469" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14586"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAAC</genome_strand>
        <mrna_strand>CTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAAGACTAATGAATTTCGAGCACCCGATGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E402429" ref_strand="+" ref_description="SGN-E402429 [PPC-7-P13]">
      <seq>aaaaagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttcctcaacaaacactacaaaaattcatctcgactcgtccatttgacacctcttatgttagctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttccttgctcaatcacacacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttatgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaagactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggcattgcagctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccacagtgagaaaggactaatgaatttcgagcatccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16835" stop="14292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16535" g_stop="16319" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="461" r_length="244" r_score="0.984"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="582" r_length="121" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14592" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="583" r_stop="629" r_length="47" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E402429" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E402429" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16535" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCG</genome_strand>
        <mrna_strand>AAAAAGATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCTCAACAAACACTACAAAAATTCATCTCGACTCGTCCATTTGACACCTCTTATGTTAGCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCCTTGCTCAATCACACACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTATGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAGACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCAGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCACAGTGAGAAAGGACTAATGAATTTCGAGCATCCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E212577" ref_strand="+" ref_description="SGN-E212577 [cLEC-74-N19]">
      <seq>aaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcgagcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16847" stop="14294"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16547" g_stop="16319" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="473" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="594" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14594" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="639" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E212577" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212577" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16547" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14594"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACC</genome_strand>
        <mrna_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E617494" ref_strand="+" ref_description="SGN-E617494 [66345]">
      <seq>catcttgnaagctaaaaaagagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacacttcaaaaattcatctcgactcgtccatttgatacctcttatgttacctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttctttgctcaatcacacacaaacgtattttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttatgtgcacaaatcaaacaatatgggctatcacctaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgtcatctatgatagtaagacgggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggcattgctgctgatggatctgtggtgatttctgatgatgtagaggtcattaaagctggctgtgctaagtcatttgcaccctttcccacaggttgtatgttccaacaaggtgagaaaggactaatgaattcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16838" stop="14299"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16529" g_stop="16319" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="233" r_length="211" r_score="0.938"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.367" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="476" r_length="243" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="597" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.940" a_score="0.80"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14599" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="598" r_stop="639" r_length="42" r_score="0.800"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E617494" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>616</cumulative_length_of_scored_exons>
        <coverage percentage="0.964" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E617494" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16529" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCC-A-TA-GTGAGAAAGGACTAATGAATTTCGA</genome_strand>
        <mrna_strand>ATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACACTTCAAAAATTCATCTCGACTCGTCCATTTGATACCTCTTATGTTACCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCTTTGCTCAATCACACACAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTA-TTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTATGTGCACAAATCAAACAATATGGGCTATCACCTAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTCATCTATGATAGTAAGACGGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTCATTAAAGCTGGCTGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCAACAAGGTGAGAAAGGACTAATGAA-TTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E273479" ref_strand="+" ref_description="SGN-E273479 [cLEN-3-B16]">
      <seq>aaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggttggnaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaatttcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16835" stop="14300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16535" g_stop="16319" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="461" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.87"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="585" r_length="124" r_score="0.950"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14600" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="586" r_stop="624" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E273479" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="0.995" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16535" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGG-T-G-AAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCG</genome_strand>
        <mrna_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTTGGNAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E251191" ref_strand="+" ref_description="SGN-E251191 [cLEG-10-D16]">
      <seq>ttgaagctaaaaaaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgagaaaggactaatgaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16858" stop="14302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16558" g_stop="16319" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="241" r_length="241" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="242" r_stop="485" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="606" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14602" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="643" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E251191" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251191" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16558" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGCT-AAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTT</genome_strand>
        <mrna_strand>TTGAAGCTAAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E212778" ref_strand="+" ref_description="SGN-E212778 [cLEC-73-N20]">
      <seq>tttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacacgttgtatgttccatagtgagaaaggactaatgaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16812" stop="14302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16512" g_stop="16319" g_length="194"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="438" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="559" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14602" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="560" r_stop="596" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E212778" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E212778" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16512" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTT</genome_strand>
        <mrna_strand>TTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAC..............................................................................................................................................................................GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E314511" ref_strand="+" ref_description="SGN-E314511 [cTOB-1-K7]">
      <seq>aaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16840" stop="14319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16540" g_stop="16319" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="222" r_length="222" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="466" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="587" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14619" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="588" r_stop="607" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E314511" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16540" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAG</genome_strand>
        <mrna_strand>AAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E259601" ref_strand="+" ref_description="SGN-E259601 [cLEG-42-P20]">
      <seq>tcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccctttcccacaggttgtatgttccatagtgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16810" stop="14319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16510" g_stop="16319" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="436" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="557" r_length="121" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14619" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="577" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E259601" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259601" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16510" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14619"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCATAGTGAG</genome_strand>
        <mrna_strand>TCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCATAGTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E393984" ref_strand="+" ref_description="SGN-E393984 [TUS-14-G21]">
      <seq>atttcatcttgaagctaaaaaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctgggatgtgctaaatcatttgcaccctttcccacggttttatgttccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16866" stop="14511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16566" g_stop="16319" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="492" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="493" r_stop="613" r_length="121" r_score="0.967"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14625" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="614" r_stop="627" r_length="14" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E393984" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>627</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E393984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16566" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14625"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCT-GGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCAT</genome_strand>
        <mrna_strand>ATTTCATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGGATGTGCTAAATCATTTGCACCCTTTCCCAC-G..............................................................................................................................................................................GTTTTATGTTCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E618599" ref_strand="+" ref_description="SGN-E618599 [69279]">
      <seq>agctaaaaaagagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacacttcaaaaattcatctcgactcgtccatttgatacctcttatgttacctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttctttgctcaatcacacacaaacgtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttatgtgcacaaatcaaacaatatgggctatcacctaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgtcatctatgatagtaagacgggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggcattgctgctgatggatctgtggtgatttctgatgatgtagaggtcattaaagctggctgtgctaagtcatttgcaccctttcccacaggttgtatgttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16838" stop="14511"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16542" g_stop="16319" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.915"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="468" r_length="244" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14813" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="589" r_length="121" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.940" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14638" g_stop="14626" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="602" r_length="13" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E618599" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E618599" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16542" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14813"/>
          <exon e_start="14638" e_stop="14626"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAGGTAACATCTATAAGGAATTTCATATTTTATAGATGGAGGAATATTTTGGTTTCTTCGTTTCGTAGTAAATAGGAGAGGAAGTTGAATTTAGTTCTTCGATTTTACAAAATTTGATTCACTGACTTGGCTACATCAGCCCCCTCGTCTACTTAACGTTCCAATTGAAATGTACAGGTTGTATGTTCCA</genome_strand>
        <mrna_strand>AGCTAAAAAAGAGATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACACTTCAAAAATTCATCTCGACTCGTCCATTTGATACCTCTTATGTTACCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCTTTGCTCAATCACACACAAAC.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTATGTGCACAAATCAAACAATATGGGCTATCACCTAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTCATCTATGATAGTAAGACGGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGCATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTCATTAAAGCTGGCTGTGCTAAGTCATTTGCACCCTTTCCCACAG..............................................................................................................................................................................GTTGTATGTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E251043" ref_strand="+" ref_description="SGN-E251043 [cLEG-17-N17]">
      <seq>aaatgtttacttccacaacaaacgctacaaaaattcttatcgactcgtccattgggacaccttttatgttacttttggagatgttgctgctcttgctttagttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaagattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcacatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagacgttattaaagctggatgtgctaagtcattttgcaccctttcccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16758" stop="14515"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16458" g_stop="16319" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="385" r_length="244" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14815" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="505" r_length="120" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E251043" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16458" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14815"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATT-TGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCA-TTTGCACCCTTTCCCAC</genome_strand>
        <mrna_strand>AAATGTTTACTTCCACAACAAACGCTACAAAAATTCTTATCGACTCGTCCATTGGGACACCTTTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTAGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAAGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCACATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGACGTTATTAAAGCTGGATGTGCTAAGTCATTTTGCACCCTTTCCCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E274236" ref_strand="+" ref_description="SGN-E274236 [cLEN-15-G19]">
      <seq>atcttgaagctaaaaaaaacaaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcacccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16861" stop="14520"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16561" g_stop="16319" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="488" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14820" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="602" r_length="114" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E274236" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16561" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGAAGCTAAAAAAAAC-AAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTT</genome_strand>
        <mrna_strand>ATCTTGAAGCTAAAAAAAACAAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E259453" ref_strand="+" ref_description="SGN-E259453 [cLEG-42-E21]">
      <seq>aaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaaactggatgtgctaagtcatttgcaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16847" stop="14523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16547" g_stop="16319" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="473" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14823" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="584" r_length="111" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E259453" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259453" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16547" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCC</genome_strand>
        <mrna_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAACTGGATGTGCTAAGTCATTTGCACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E250887" ref_strand="+" ref_description="SGN-E250887 [cLEG-13-I11]">
      <seq>aacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16844" stop="14523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16544" g_stop="16319" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="470" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14823" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="581" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E250887" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16544" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCC</genome_strand>
        <mrna_strand>AACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E258878" ref_strand="+" ref_description="SGN-E258878 [cLEG-41-C22]">
      <seq>ttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16811" stop="14523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16511" g_stop="16319" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="437" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14823" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="548" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E258878" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>548</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258878" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16511" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCC</genome_strand>
        <mrna_strand>TTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E259635" ref_strand="+" ref_description="SGN-E259635 [cLEG-42-M17]">
      <seq>tcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16810" stop="14523"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16510" g_stop="16319" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="436" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14823" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="437" r_stop="547" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E259635" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259635" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16510" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14823"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCC</genome_strand>
        <mrna_strand>TCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E250565" ref_strand="+" ref_description="SGN-E250565 [cLEG-21-E7]">
      <seq>gaagctaaaaaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtagaggttattaaagctggatgtgctaagtcatttgcacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16856" stop="14524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16556" g_stop="16319" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="482" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14824" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="592" r_length="110" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E250565" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>592</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250565" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16556" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14824"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACC</genome_strand>
        <mrna_strand>GAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E205957" ref_strand="+" ref_description="SGN-E205957 [cLEC-20-A6]">
      <seq>aaaaacataaaaaaaaacaaacgatgttggctatatttcgcaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgtag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16847" stop="14561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16547" g_stop="16319" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="0.991"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="473" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14861" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="546" r_length="73" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E205957" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205957" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16547" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAG</genome_strand>
        <mrna_strand>AAAAACATAAAAAAAAACAAACGATGTTGGCTATATTTCGCAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254626" ref_strand="+" ref_description="SGN-E254626 [cLEG-29-K9]">
      <seq>aaacaaaaaaaaaaaccaaacgatgttggctatatttcacaaggcatttgctgatcctgctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccaccaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttaccttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16845" stop="14563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16545" g_stop="16319" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="474" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14863" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="545" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E254626" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254626" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16545" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAAAAAAAAAAA-CAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCA-CAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTA-CTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGT</genome_strand>
        <mrna_strand>AAACAAAAAAAAAAACCAAACGATGTTGGCTATATTTCACAAGGCATTTGCTGATCCTGCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACCAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACCTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E251909" ref_strand="+" ref_description="SGN-E251909 [cLEG-14-G9]">
      <seq>aaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttaccttccacaaccaaaccgctaccaaaaattcgtatcgactcgtccatttgaccacctcttatgttaccttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcaccaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgccaccaaatcaaacaatatgggctatcaccaaaaggtaccaaatgaagccatgcctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16834" stop="14563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16534" g_stop="16319" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.935"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="471" r_length="248" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14863" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="542" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E251909" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>531</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16534" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTA-CTTCCACAA-CAAA-CGCTA-CAAAAATTCGTATCGACTCGTCCATTTGA-CACCTCTTATGTTA-CTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCA-CAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTG-CA-CAAATCAAACAATATGGGCTATCACCAAAAGGTA-CAAATGAAGCCATG-CTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGT</genome_strand>
        <mrna_strand>AAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACCTTCCACAACCAAACCGCTACCAAAAATTCGTATCGACTCGTCCATTTGACCACCTCTTATGTTACCTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACCAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCCACCAAATCAAACAATATGGGCTATCACCAAAAGGTACCAAATGAAGCCATGCCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E274006" ref_strand="+" ref_description="SGN-E274006 [cLEN-8-I22]">
      <seq>aacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16828" stop="14563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16528" g_stop="16319" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="454" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14863" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="455" r_stop="525" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E274006" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274006" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16528" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGT</genome_strand>
        <mrna_strand>AACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E255841" ref_strand="+" ref_description="SGN-E255841 [cLEG-35-G10]">
      <seq>ttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16811" stop="14563"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16511" g_stop="16319" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="437" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14863" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="508" r_length="71" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E255841" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255841" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16511" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14863"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGT</genome_strand>
        <mrna_strand>TTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E273363" ref_strand="+" ref_description="SGN-E273363 [cLEN-3-N19]">
      <seq>ttgaagctaaaaaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16858" stop="14564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16558" g_stop="16319" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="240" r_length="240" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="484" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14864" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="554" r_length="70" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E273363" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273363" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16558" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATG</genome_strand>
        <mrna_strand>TTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254921" ref_strand="+" ref_description="SGN-E254921 [cLEG-33-A14]">
      <seq>caaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16830" stop="14564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16530" g_stop="16319" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="456" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14864" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="526" r_length="70" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E254921" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>526</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16530" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14864"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATG</genome_strand>
        <mrna_strand>CAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E276303" ref_strand="+" ref_description="SGN-E276303 [cLEN-21-B1]">
      <seq>aaaaaaaaacatacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16839" stop="14565"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16539" g_stop="16319" g_length="221"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="221" r_length="221" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="465" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14865" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="534" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E276303" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E276303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16539" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGAT</genome_strand>
        <mrna_strand>AAAAAAAAACATACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E259880" ref_strand="+" ref_description="SGN-E259880 [cLEG-51-N4]">
      <seq>ctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaagaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16769" stop="14565"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16469" g_stop="16319" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="395" r_length="244" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14865" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="464" r_length="69" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E259880" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E259880" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16469" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGAT</genome_strand>
        <mrna_strand>CTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAAGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E248764" ref_strand="+" ref_description="SGN-E248764 [cLEG-5-G8]">
      <seq>aaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttctgatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16847" stop="14566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16547" g_stop="16319" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="473" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14866" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="541" r_length="68" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E248764" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>541</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248764" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16547" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14866"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGA</genome_strand>
        <mrna_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254313" ref_strand="+" ref_description="SGN-E254313 [cLEG-27-D18]">
      <seq>catcttgaagctaaaaaaaacaacggaatatcaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggtattgctgctgatggatctgtggtgatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16862" stop="14572"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16562" g_stop="16319" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="243" r_length="243" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="244" r_stop="487" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14872" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="488" r_stop="549" r_length="62" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E254313" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>550</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16562" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTC</genome_strand>
        <mrna_strand>CATCTTGAAGCTAAAAAAAAC-AACGGAATATCAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E252907" ref_strand="+" ref_description="SGN-E252907 [cLEG-16-N20]">
      <seq>aaacaaacgatgttggctatatttcacaaggcatttgctcatcctggctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaagattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagatattttgggggtattgctgctgatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16833" stop="14586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16533" g_stop="16319" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="460" r_length="244" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14886" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="461" r_stop="509" r_length="49" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E252907" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E252907" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16533" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14886"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCT-CCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTT-GGGGTATTGCTGCTGATGGA</genome_strand>
        <mrna_strand>AAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTGGCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAAGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGATATTTTGGGGGTATTGCTGCTGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E257052" ref_strand="+" ref_description="SGN-E257052 [cLEG-44-O6]">
      <seq>gaagctaaaaaaaacaaaaaaaaaatcaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgttgctttgggttcagatggtggggtgaagttattttggggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16856" stop="14600"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16556" g_stop="16319" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="482" r_length="244" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14933" g_stop="14900" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="516" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E257052" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E257052" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16556" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
          <exon e_start="14933" e_stop="14900"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTGGTAAGTATCTGTATTACTCCCTCCGTCCTATTTTATACGAGTCAGTTTGACTATTGACACGAAGTTTAATATAGTTTAGAATAAGTTGATACAATATTTGTTTGTGTGCCTATAAATTATTTCATTAAGGATAAAATAGTCTATATAGAAATATGTCATTTTTTCAACAGTGACTATAAAAGACACTGAGTCATATAAACTGGGATAGAGGGGAGAGAGGGAGTATTACTTGTTTGTTCATTTACTCAGCTCAGTTTCAATATGTTTGTTTGATTTTGACTTGATATGAAGTTTAAGAAAGTAAAAGACGGAGTTTTGAATCTTGTTGTGTTTAAACTAAAGATATTTTGGATGTATCAAAATGTGGTTTAATCTGTTGTCGTCATACAAGTGCAGGGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTA</genome_strand>
        <mrna_strand>GAAGCTAAAAAAAACAAAAAAAAAATCAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG............................................................................................................................................................................................................................................................................................................................................................................................................GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E623034" ref_strand="+" ref_description="SGN-E623034 [73408]">
      <seq>cttgaagctaaaaaaagatacaatgttggctatatttcacaagggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttcctcaacaaacacttcaaaaattcatctcgactcgtccatttgacacctcttatgttacctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttccttgctcaatcacacacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaagactggaacagtatttgttgctttgggttcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16859" stop="15029"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16546" g_stop="16319" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15330" g_length="244"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="473" r_length="244" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E623034" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>472</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E623034" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16546" e_stop="16319"/>
          <exon e_start="15573" e_stop="15330"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAA-GGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG</genome_strand>
        <mrna_strand>CTTGAAGCTAAAAAAAGATACAATGTTGGCTATATTTCACAAGGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCTCAACAAACACTTCAAAAATTCATCTCGACTCGTCCATTTGACACCTCTTATGTTACCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCCTTGCTCAATCACACACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAGACTGGAACAGTATTTGTTGCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E202345" ref_strand="+" ref_description="SGN-E202345 [cLEC-6-L13]">
      <seq>tttcatcttgaagctaaaaaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16865" stop="15036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16565" g_stop="16319" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="247" r_length="247" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15336" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="248" r_stop="485" r_length="238" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E202345" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202345" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16565" e_stop="16319"/>
          <exon e_start="15573" e_stop="15336"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTT</genome_strand>
        <mrna_strand>TTTCATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E255806" ref_strand="+" ref_description="SGN-E255806 [cLEG-35-I3]">
      <seq>aaaaaaacaaaaaaaaatcaaacgatgttggctatatttcacaagggggttgctcatcctcctgaagaattaaatcgtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgatcgtgctaagtgcacctccttgctcaatcacaaacaaaggtgttgatgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16849" stop="15037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16549" g_stop="16319" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.367" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15337" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="467" r_length="237" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E255806" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E255806" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16549" e_stop="16319"/>
          <exon e_start="15573" e_stop="15337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGT</genome_strand>
        <mrna_strand>AAAAAAAC-AAAAAAAAATCAAACGATGTTGGCTATATTTCACAAGGGGGTTGCTCATCCTCCTGAAGAATTAAATCGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGATCGTGCTAAGTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTTGATGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E266449" ref_strand="+" ref_description="SGN-E266449 [cLEI-3-F22]">
      <seq>aaaacaaaaaaaaaaacaaacgatgttggctatgtttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtatttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16846" stop="15037"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16546" g_stop="16319" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15337" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="465" r_length="237" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E266449" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266449" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16546" e_stop="16319"/>
          <exon e_start="15573" e_stop="15337"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGT</genome_strand>
        <mrna_strand>AAAACAAAAAAAAAAACAAACGATGTTGGCTATGTTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E476054" ref_strand="+" ref_description="SGN-E476054 [cSTB-43-M15]">
      <seq>cttgaagctaaaaaaagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttcctcaacaaacacttcaaaaattcatctcgactcgtccatttgacacctcttatgttacctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttccttgctcaatcacacacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaagactggaacagtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16859" stop="15041"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16546" g_stop="16319" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="0.912"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15341" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="229" r_stop="461" r_length="233" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E476054" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E476054" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16546" e_stop="16319"/>
          <exon e_start="15573" e_stop="15341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTAT</genome_strand>
        <mrna_strand>CTTGAAGCTAAAAAAAGATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCTCAACAAACACTTCAAAAATTCATCTCGACTCGTCCATTTGACACCTCTTATGTTACCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCCTTGCTCAATCACACACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAGACTGGAACAGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E275101" ref_strand="+" ref_description="SGN-E275101 [cLEN-9-E14]">
      <seq>ttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagttttgcttttgttatctatgatagtaaaactggaactgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16821" stop="15041"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16521" g_stop="16319" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="203" r_length="203" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15341" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="436" r_length="233" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E275101" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E275101" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16521" e_stop="16319"/>
          <exon e_start="15573" e_stop="15341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTAT</genome_strand>
        <mrna_strand>TTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E397456" ref_strand="+" ref_description="SGN-E397456 [TUS-45-D10]">
      <seq>aaatatcaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattacatagtcctgcatcaaaaaaatgtttacttcctcaacaaacgctacaaaaattcgaatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcagaaacaaaggtatttttgtggttatgatgatatttactgtttgttcttggggagtttgaacaatttgtgtgcacaaatctaacaataagggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttatagacaggggaccttatccagctgatcaagttatgaaggattttgagggaagttttgcttttgttatctatgataggaaaactgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16848" stop="15048"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16548" g_stop="16319" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.367" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15348" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="456" r_length="226" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E397456" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397456" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16548" e_stop="16319"/>
          <exon e_start="15573" e_stop="15348"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGA</genome_strand>
        <mrna_strand>AAATATCAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTACATAGTCCTGCATCAAAAAAATGTTTACTTCCTCAACAAACGCTACAAAAATTCGAATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCAGAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCTTGGGGAGTTTGAACAATTTGTGTGCACAAATCTAACAATAAGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTATAGACAGGGGACCTTATCCAGCTGATCAAGTTATGAAGGATTTTGAGGGAAGTTTTGCTTTTGTTATCTATGATAGGAAAACTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E314485" ref_strand="+" ref_description="SGN-E314485 [cTOB-1-A11]">
      <seq>atcttgaagcttaaaaaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttattaaggattttgaaggaagntttgcttttgttatctatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16861" stop="15061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16561" g_stop="16319" g_length="243"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="244" r_length="244" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15361" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="457" r_length="213" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E314485" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>456</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E314485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16561" e_stop="16319"/>
          <exon e_start="15573" e_stop="15361"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTTGAAGC-TAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGA</genome_strand>
        <mrna_strand>ATCTTGAAGCTTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGNTTTGCTTTTGTTATCTATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E305371" ref_strand="+" ref_description="SGN-E305371 [cLEX-15-A21]">
      <seq>aaacaaacgatgtaggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaaagttattaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16833" stop="15097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16533" g_stop="16319" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="215" r_length="215" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15397" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="393" r_length="178" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E305371" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>392</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16533" e_stop="16319"/>
          <exon e_start="15573" e_stop="15397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATC-AAGTTATTAA</genome_strand>
        <mrna_strand>AAACAAACGATGTAGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAAGTTATTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E250732" ref_strand="+" ref_description="SGN-E250732 [cLEG-7-B13]">
      <seq>tggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagttatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16820" stop="15098"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16520" g_stop="16319" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="202" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15398" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="203" r_stop="378" r_length="176" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E250732" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>378</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E250732" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16520" e_stop="16319"/>
          <exon e_start="15573" e_stop="15398"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTA</genome_strand>
        <mrna_strand>TGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E273414" ref_strand="+" ref_description="SGN-E273414 [cLEN-3-E2]">
      <seq>gcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacacttagagacaggggaccttatccagctgatcaagtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16665" stop="15101"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16365" g_stop="16319" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15401" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="220" r_length="173" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E273414" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>220</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E273414" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16365" e_stop="16319"/>
          <exon e_start="15573" e_stop="15401"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTA</genome_strand>
        <mrna_strand>GCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E477321" ref_strand="+" ref_description="SGN-E477321 [cSTB-47-J14]">
      <seq>aaaagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaataggcctgcatcaaaaaaatgtttacttcctcaacaaacactacaaaaattcatctcgactcgtccatttgacacctcttatgttagctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttccttgctcaatcacacacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttatgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccctatccagctgatcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16834" stop="15105"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16534" g_stop="16319" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.940"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15405" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="385" r_length="169" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E477321" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16534" e_stop="16319"/>
          <exon e_start="15573" e_stop="15405"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAA</genome_strand>
        <mrna_strand>AAAAGATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGGCCTGCATCAAAAAAATGTTTACTTCCTCAACAAACACTACAAAAATTCATCTCGACTCGTCCATTTGACACCTCTTATGTTAGCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCCTTGCTCAATCACACACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTATGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCCTATCCAGCTGATCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E477055" ref_strand="+" ref_description="SGN-E477055 [cSTB-47-G23]">
      <seq>aaaagatacaatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttcctcaacaaacactacaaaaattcatctcgactcgtccatttgacacctcttatgttagctttggagatgctgctgctcttgcttttgttcgtcctaattgcacttccttgctcaatcacacacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaacttatgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagttattgaagcctacaggacacttagagacaggggaccttatccagctgatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16834" stop="15107"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16534" g_stop="16319" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15407" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="383" r_length="167" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E477055" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E477055" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16534" e_stop="16319"/>
          <exon e_start="15573" e_stop="15407"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATC</genome_strand>
        <mrna_strand>AAAAGATACAATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCTCAACAAACACTACAAAAATTCATCTCGACTCGTCCATTTGACACCTCTTATGTTAGCTTTGGAGATGCTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACTTCCTTGCTCAATCACACACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAACTTATGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTTATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E258982" ref_strand="+" ref_description="SGN-E258982 [cLEG-41-J10]">
      <seq>cacctcttatgttacttttggagatgttgctgctctagcttttgttcctactaattgcacctacttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgcttgttcatggggagtacgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacacgacacttagagacaggggaccttatccagctgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16702" stop="15108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16402" g_stop="16319" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.367" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15408" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="250" r_length="166" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E258982" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>250</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E258982" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16402" e_stop="16319"/>
          <exon e_start="15573" e_stop="15408"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGAT</genome_strand>
        <mrna_strand>CACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTAGCTTTTGTTCCTACTAATTGCACCTACTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGCTTGTTCATGGGGAGTACGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACACGACACTTAGAGACAGGGGACCTTATCCAGCTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E305206" ref_strand="+" ref_description="SGN-E305206 [cLEX-15-A19]">
      <seq>aaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatgaagccatgctagtcattgaagcctacaggacactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16835" stop="15135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16535" g_stop="16319" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15435" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="356" r_length="139" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E305206" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>356</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16535" e_stop="16319"/>
          <exon e_start="15573" e_stop="15435"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTT</genome_strand>
        <mrna_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E200663" ref_strand="+" ref_description="SGN-E200663 [cLEC-9-B1]">
      <seq>aaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttactttcacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttgtggttatgatgatatttactgtttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatatgggctatcaccaaaaggtacaaatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16835" stop="15169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16535" g_stop="16319" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15469" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="322" r_length="105" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E200663" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16535" e_stop="16319"/>
          <exon e_start="15573" e_stop="15469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGA</genome_strand>
        <mrna_strand>AAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTTCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E274000" ref_strand="+" ref_description="SGN-E274000 [cLEN-8-E8]">
      <seq>aaaaacaaaaaaaaaaacaaacgatgttggctatatttcacaaggcatttgctcatcctcctgaagaattaaatagtcctgcatcaaaaaaatgtttacttccacaacaaacgctacaaaaattcgtatcgactcgtccatttgacacctcttatgttacttttggagatgttgctgctcttgcttttgttcgtcctaattgcacctccttgctcaatcacaaacaaaggtatttttggggttatgatgatatttactggttgttcatggggagtttgaacaatttgtgtgcacaaatcaaacaatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16847" stop="15195"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16547" g_stop="16319" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.367" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15573" g_stop="15495" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="308" r_length="79" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E274000" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E274000" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16547" e_stop="16319"/>
          <exon e_start="15573" e_stop="15495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAGGTAAAATAATTACTACTAATTTTACTACTTTTTCGGTTTATTTTATATGATACTGTTTGATTTTGATTTGATAATAACATAAAATTGTATTATAAAATTTTTCTTGTATTAGGGTATAGGTGGATCGCGCTCCCTAGGAATTAGTATGAAAATTTGTTTAGTCTGATTTAGTTGTCAATGTATGTAAAAAATAATTAGTTTAAAATATTTTTTTAATTTAATAAATCAAGAAAAAAGTACTATTTTTGTTCAATTTAATGTAAAACTATTTGACTCTGAAATGATATTTAAGGAGAAAAAAAGGAAGATTATCGAAGTTTGTGCTCTAAAATAATATTTAGATGTTTTTGTGGTTGGTAATCATTTCATCATTCGGAGTAAAAATGATATTTGAAAGTTAAATTGTGCATAGTAATGTGATATTATTTTTGGAAGAGACTAAGAATGAAAAGTATTCCACATAAAATGAGACCAAATTTTGCCCTTAATATTAGTTATTTTCGAATTTAGAGAAGTGAAGTAAATAAAGACTAAAATAGTTCATAAGATATATATATATATCAGTCAAATTACACCCCATAACTTCTTAAGAATTGTGTAAAACAATAGCATAACGAGACAACTAAACAGGAACAGAAGGAGTAGCTCGTAGCTAGCTGTCTATGAATTTTGTTGTTTAGCTGAAAGAATGCTTTTTTGTATTGAATTTCATGGAATTGAAGCGCGATTATAATTATTGTTGTAGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATAT</genome_strand>
        <mrna_strand>AAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTTTTGGGGTTATGATGATATTTACTGGTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E720199" ref_strand="+" ref_description="SGN-E720199 [FC10AD09]">
      <seq>gatctattaattaaaaattaatttgggagaaacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23178" stop="26135"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23477" g_stop="23592" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="116" r_length="116" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="117" r_stop="263" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="264" r_stop="329" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="495" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="727" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25714" g_stop="25835" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="728" r_stop="849" r_length="122" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E720199" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>849</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720199" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23477" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATCTATTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATT</genome_strand>
        <mrna_strand>GATCTATTAATTAAAAATTAATTTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E274303" ref_strand="+" ref_description="SGN-E274303 [cLEN-15-C21]">
      <seq>ttaattaaaaattaaattgggagaaacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23183" stop="25578"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23483" g_stop="23592" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="257" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="323" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="489" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25278" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="490" r_stop="613" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E274303" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>613</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274303" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23483" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATC</genome_strand>
        <mrna_strand>TTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E213319" ref_strand="+" ref_description="SGN-E213319 [cLEC-71-B2]">
      <seq>ttaattaaaaattaaattgggagaaacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggtaaatctttcactgatatatcagacgtgtttttgaccattatatcaattccttacgttagtcttaacacgtgactaactttaataagcttcaattaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23183" stop="25534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23483" g_stop="23592" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="257" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="323" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25234" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="668" r_length="345" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E213319" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23483" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTC</genome_strand>
        <mrna_strand>TTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E255377" ref_strand="+" ref_description="SGN-E255377 [cLEG-30-H21]">
      <seq>taaaaattaaattgggagaaacttagaaataatggagactgaagaaaatattgggattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23188" stop="25537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23488" g_stop="23592" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.962"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="252" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="318" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="484" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25237" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="567" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E255377" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23488" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGC</genome_strand>
        <mrna_strand>TAAAAATTAAATTGGGAGAAACTTAGAAATAATGGAGACTGAAGAAAATATTGGGATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E720583" ref_strand="+" ref_description="SGN-E720583 [FC11AH09]">
      <seq>aatcggccgaattgaaaaattaaattgggagaaacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23185" stop="26137"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23489" g_stop="23592" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="118" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="265" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="331" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="332" r_stop="497" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="729" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25714" g_stop="25837" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="730" r_stop="853" r_length="124" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E720583" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>839</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E720583" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23489" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25837"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGC</genome_strand>
        <mrna_strand>AAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E255043" ref_strand="+" ref_description="SGN-E255043 [cLEG-31-M9]">
      <seq>aaaaattaaattgggagaaacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23189" stop="25537"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23489" g_stop="23592" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="104" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="105" r_stop="251" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="317" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="318" r_stop="483" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25237" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="566" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E255043" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255043" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23489" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25237"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGC</genome_strand>
        <mrna_strand>AAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E261466" ref_strand="+" ref_description="SGN-E261466 [cLEG-57-N4]">
      <seq>aaaattaaattgggagaaacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23190" stop="25601"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23490" g_stop="23592" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="250" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="316" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="482" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25301" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="629" r_length="147" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E261466" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261466" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23490" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25301"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTT</genome_strand>
        <mrna_strand>AAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E272157" ref_strand="+" ref_description="SGN-E272157 [cLEN-4-I3]">
      <seq>aaaattaaattgggagaaacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23190" stop="25517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23490" g_stop="23592" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="103" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="250" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="316" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="482" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25217" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="483" r_stop="545" r_length="63" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E272157" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>545</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E272157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23490" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25217"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCT</genome_strand>
        <mrna_strand>AAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E416943" ref_strand="+" ref_description="SGN-E416943 [STM-24-I9]">
      <seq>gaaacagagaaatgatggagactgaagaaaacattgtaattgttggtgctggcatagctggtcttgctacttgtttggcccttcacaggttggggctgcggagtattgtgttggaatcagcagattcgttgcgagctactggatttgcgttggcattgtggactaatgcctggagagctttggatgcattgggcattggggactctcttagacaacgttccttatccattactgggcttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgttgagtatgaaagtcgttgtgtgaggagaaaagatctgttggagacattagctaatgaactgcctcaaggcgcgattagatattcttccaaagtcgattccattgaagaatctggaccattgaaattggtacatcttgcagatggttccactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23205" stop="25556"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23505" g_stop="23592" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="235" r_length="147" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="301" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="467" r_length="166" r_score="0.946"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25256" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="569" r_length="102" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E416943" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23505" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25256"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAG</genome_strand>
        <mrna_strand>GAAACAGAGAAATGATGGAGACTGAAGAAAACATTGTAATTGTTGGTGCTGGCATAGCTGGTCTTGCTACTTGTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGGCTGCGGAGTATTGTGTTGGAATCAGCAGATTCGTTGCGAGCTACTGGATTTGCGTTGGCATTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCCATTACTGG..........................................................................................................................................GCTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGTATGAAAGTCGTTGTGTGAGGAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCGATTAGATATTCTTCCAAAGTCGATTCCATTGAAGAATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTCCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E407849" ref_strand="+" ref_description="SGN-E407849 [PPI-8-D2]">
      <seq>gaaacagagaaatgatggagactgaagaaaacattgtaattgttggtgctggcatagctggtcttgctacttctttggcccttcaccggttggggctgcggagtattgtgttggaatcagcagattcattgcgagctactggatttgcattggcattgtggactaatgcctggagagctttggatgcgttgggcattggggactctcttagacaacgttccttatcaattactgggcttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgttgagtatgaaagtcgttgtgtgagga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23205" stop="25218"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23505" g_stop="23592" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="235" r_length="147" r_score="0.946"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="0.979" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="301" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="24918" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="330" r_length="29" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E407849" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>330</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E407849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23505" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="24918"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAA</genome_strand>
        <mrna_strand>GAAACAGAGAAATGATGGAGACTGAAGAAAACATTGTAATTGTTGGTGCTGGCATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGGCTGCGGAGTATTGTGTTGGAATCAGCAGATTCATTGCGAGCTACTGGATTTGCATTGGCATTGTGGACTAATGCCTGGAGAGCTTTGGATGCGTTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCAATTACTGG..........................................................................................................................................GCTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGTATGAAAGTCGTTGTGTGAGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E264746" ref_strand="+" ref_description="SGN-E264746 [cLEG-71-C16]">
      <seq>aaacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttccggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23206" stop="25690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23506" g_stop="23592" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="87" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="88" r_stop="234" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="235" r_stop="300" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="466" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="467" r_stop="699" r_length="233" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E264746" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264746" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23506" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTT-CGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT</genome_strand>
        <mrna_strand>AAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E248435" ref_strand="+" ref_description="SGN-E248435 [cLEF-59-D9]">
      <seq>aaacagagaaatgatggagactgaagaaaacattgtaattgggggtgcgtgggatagctggtcttgctacttgtttggcccttcacaggttggggctgcggagtattgtgttggaatcagcagattcgttgcgagctactggatttgcgttggcattgtggactaatgcctggagagctttggatgcattgggcattggggactctcttagacaacgttccttatccattactgggcttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgttgagtatgaaagtcgttgtgtgaggagaaaagatctgttggagacattagctaatgaactgcctcaaggcgcgattagatattcttccaaagtcgattccattgaagaatctggaccattgaaattggtacatcttgcagatggttccactattaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23206" stop="25349"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23506" g_stop="23592" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="0.908"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="0.88"/>
            <acceptor a_prob="0.914" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="235" r_length="147" r_score="0.959"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="301" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25049" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="461" r_length="160" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E248435" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>460</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248435" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23506" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25049"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGC-TGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGA</genome_strand>
        <mrna_strand>AAACAGAGAAATGATGGAGACTGAAGAAAACATTGTAATTGGGGGTGCGTGGGATAGCTGGTCTTGCTACTTGTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGGCTGCGGAGTATTGTGTTGGAATCAGCAGATTCGTTGCGAGCTACTGGATTTGCGTTGGCATTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCCATTACTGG..........................................................................................................................................GCTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGTATGAAAGTCGTTGTGTGAGGAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCGATTAGATATTCTTCCAAAGTCGATTCCATTGAAGAATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTCCACTATTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E204220" ref_strand="+" ref_description="SGN-E204220 [cLEC-13-D17]">
      <seq>aacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23207" stop="25535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23507" g_stop="23592" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="233" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="299" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="465" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25235" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="546" r_length="81" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E204220" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E204220" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23507" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCT</genome_strand>
        <mrna_strand>AACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E200988" ref_strand="+" ref_description="SGN-E200988 [cLEC-5-A12]">
      <seq>aacagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23207" stop="25222"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23507" g_stop="23592" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="86" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="87" r_stop="233" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="299" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="24922" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="300" r_stop="332" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E200988" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>332</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E200988" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23507" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="24922"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAA</genome_strand>
        <mrna_strand>AACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E702289" ref_strand="+" ref_description="SGN-E702289 [FA18BC07]">
      <seq>cagagaaataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23209" stop="26139"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23509" g_stop="23592" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="231" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="297" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="463" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="695" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25714" g_stop="25839" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="696" r_stop="821" r_length="126" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E702289" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>821</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702289" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23509" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTC</genome_strand>
        <mrna_strand>CAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E261790" ref_strand="+" ref_description="SGN-E261790 [cLEG-61-I5]">
      <seq>tgagaaataatggagactgaagagaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggggcacctatcacggaggtatcatttgtggggaataacaatgtggagtatgaaagtccttgtgtgagaagaaaagatctggtggacacattagctaatgaactgcctccaggcgctattagatattcttctaagggagaatccggtgaagtatccggaccattggaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23211" stop="25319"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23510" g_stop="23592" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="83" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="84" r_stop="230" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="296" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25019" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="297" r_stop="426" r_length="130" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E261790" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>426</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261790" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23510" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25019"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTG</genome_strand>
        <mrna_strand>TGAGAAATAATGGAGACTGAAGAGAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGGGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCCTTGTGTGAGAAGAAAAGATCTGGTGGACACATTAGCTAATGAACTGCCTCCAGGCGCTATTAGATATTCTTCTAAGGGAGAATCCGGTGAAGTATCCGGACCATTGGAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E208811" ref_strand="+" ref_description="SGN-E208811 [cLEC-51-J8]">
      <seq>aataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcacctattagaaccaaggccttaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23215" stop="25356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23515" g_stop="23592" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="225" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="291" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="458" r_length="167" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E208811" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E208811" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23515" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCA-CTATTAGAACCAAG</genome_strand>
        <mrna_strand>AATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACCTATTAGAACCAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E203827" ref_strand="+" ref_description="SGN-E203827 [cLEC-17-C15]">
      <seq>aataatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23215" stop="25317"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23515" g_stop="23592" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="78" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="79" r_stop="225" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="291" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25017" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="419" r_length="128" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E203827" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203827" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23515" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25017"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAAT</genome_strand>
        <mrna_strand>AATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E401027" ref_strand="+" ref_description="SGN-E401027 [PPC-2-J18]">
      <seq>atgatggagactgaagaaaacattgtaattgttggtgctggcatagctggtcttgctacttctttggcccttcaccggttggggctgcggagtattgtgttggaatcagcagattcattgcgagctactggatttgcattggcattgtggactaatgcctggagagctttggatgcgttgggcattggggactctcttagacaacgttccttatcaattactgggcttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgttgagtatgaaagtcgttgtgtgaggagaaaagatctgttggagacattagctaatgaactgcctcaagatgcgattagatattcttcaaaggtcgattccattgaagaatctggaccattgaaattggtacatcttgcagatggttccactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcctgaaaaacatggttatcagcctaagttccacgcgtattttggagggtgggagtccggtttggatttcttcctagtgatgagaagagtttgtactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23216" stop="26039"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23516" g_stop="23592" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="224" r_length="147" r_score="0.946"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="0.979" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="290" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="456" r_length="166" r_score="0.940"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="457" r_stop="690" r_length="234" r_score="0.966"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="25714" g_stop="25739" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="691" r_stop="716" r_length="26" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E401027" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E401027" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23516" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGA-GGT-GGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCA</genome_strand>
        <mrna_strand>ATGATGGAGACTGAAGAAAACATTGTAATTGTTGGTGCTGGCATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGGCTGCGGAGTATTGTGTTGGAATCAGCAGATTCATTGCGAGCTACTGGATTTGCATTGGCATTGTGGACTAATGCCTGGAGAGCTTTGGATGCGTTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCAATTACTGG..........................................................................................................................................GCTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGTATGAAAGTCGTTGTGTGAGGAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGATGCGATTAGATATTCTTCAAAGGTCGATTCCATTGAAGAATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTCCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCTGAAAAACATGGTTATCAGCCTAAGTTCCACGCGTATTTTGGAGGGTGGGAGTCCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTGTACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E261088" ref_strand="+" ref_description="SGN-E261088 [cLEG-65-O11]">
      <seq>taatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtncattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23217" stop="25586"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23517" g_stop="23592" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="223" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="289" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="455" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25286" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="587" r_length="132" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E261088" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23517" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25286"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAG</genome_strand>
        <mrna_strand>TAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTNCATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E264003" ref_strand="+" ref_description="SGN-E264003 [cLEG-64-B4]">
      <seq>taatggagactgaagaaaatattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgccattagaggctttgttgagtatcccgaaaacatggttatcagcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23217" stop="25582"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23517" g_stop="23592" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="76" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="223" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="289" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="290" r_stop="455" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25282" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="582" r_length="127" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E264003" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E264003" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23517" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25282"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCC</genome_strand>
        <mrna_strand>TAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCCATTAGAGGCTTTGTTGAGTATCCCG-AAAACATGGTTATCAGCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E477088" ref_strand="+" ref_description="SGN-E477088 [cSTB-47-M23]">
      <seq>tggagactgaagaaaacattgtaattgttggtgctggcatagctggtcttgctacttctttggcccttcacaggttggggctgcggagtattgtgttggaatcagcagattcgttgcgagctactggatttgcattggcattgtggactaatgcctggagagctttggatgcattgggcattggggactctcttagacaacgttccttatccattactgggcttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgttgagtatgaaagtcgttgtgtgaggagaaaagatctgttggagacatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23220" stop="25240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23520" g_stop="23592" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="73" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.914" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="74" r_stop="220" r_length="147" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="286" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="24940" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="337" r_length="51" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E477088" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E477088" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23520" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="24940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATT</genome_strand>
        <mrna_strand>TGGAGACTGAAGAAAACATTGTAATTGTTGGTGCTGGCATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGGGCTGCGGAGTATTGTGTTGGAATCAGCAGATTCGTTGCGAGCTACTGGATTTGCATTGGCATTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCCATTACTGG..........................................................................................................................................GCTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGTATGAAAGTCGTTGTGTGAGGAGAAAAGATCTGTTGGAGACATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E369985" ref_strand="+" ref_description="SGN-E369985 [TUS-26-N1]">
      <seq>atattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctgcagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23235" stop="25615"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23535" g_stop="23592" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="205" r_length="147" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="271" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="437" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25315" g_length="161"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="598" r_length="161" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E369985" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369985" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23535" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25315"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCG</genome_strand>
        <mrna_strand>ATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGCAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E369910" ref_strand="+" ref_description="SGN-E369910 [TUS-26-P1]">
      <seq>atattgtaattgttggtgctggtatagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23235" stop="25603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23535" g_stop="23592" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="205" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="271" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="437" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25303" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="586" r_length="149" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E369910" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369910" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23535" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25303"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGG</genome_strand>
        <mrna_strand>ATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E259731" ref_strand="+" ref_description="SGN-E259731 [cLEG-42-P3]">
      <seq>atattgtgattgctggtgctggtgtagctggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgctgtgtgagaagaaaagatctgctggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaatta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23235" stop="25542"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23535" g_stop="23592" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="58" r_length="58" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="205" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="271" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="437" r_length="166" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25242" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="438" r_stop="525" r_length="88" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E259731" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>525</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259731" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23535" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25242"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTA</genome_strand>
        <mrna_strand>ATATTGTGATTGCTGGTGCTGGTGTAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGCTGTGTGAGAAGAAAAGATCTGCTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E259960" ref_strand="+" ref_description="SGN-E259960 [cLEG-51-D21]">
      <seq>ggtcttgctacttctttggcccttcacagattggggctgcggagtattgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23264" stop="25603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23564" g_stop="23592" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24080" g_stop="24226" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="176" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="242" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="243" r_stop="408" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25155" g_stop="25303" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="557" r_length="149" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E259960" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23564" e_stop="23592"/>
          <exon e_start="24080" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25303"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTCTTGCTACTTCTTTGGCCCTTCACAGGTAATAATTTCTATTCTATTACTTGTTCAATAATTCTAAAATTTTGATTTAGAAGAACTTGATCTCAACGAGCAATTATGTCCTCAAATTTTGGACGTACCTAAGTAGTAATACGCGTAGGATGTCAGGTAAGCAGGGTTCATCCGAACCCCTTCAGCAGAAAATTATATTATTTATACGTAGTTAAAATAATTTGTTATGTATATATAGTAGATGTCGAACCACCTTAAGCTACTTCGTGAATCTATTTCTGCAGATTTTGAATCCCCTGGTCAAACTGTTAGATAAGATGTCACATTGGACGTTGTGTTAACTTGTTCAACTTTTGAGTAGTTTAAGTGTTACTTGGACATATTCAGAGTTGGAGGATATAGATGTGGGGCTAAGTTAGATGATGTATTTATATATTATGATGATTTTTTGGTATAATAGTGCTGTTAGTTGAGTGACGATTTGAGAAATAACTTGGCGGAAGGTGTGTATGTAGATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGG</genome_strand>
        <mrna_strand>GGTCTTGCTACTTCTTTGGCCCTTCACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E276686" ref_strand="+" ref_description="SGN-E276686 [cLEN-14-I18]">
      <seq>attgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23796" stop="25690"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24096" g_stop="24226" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="197" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="363" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="595" r_length="232" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E276686" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>595</cumulative_length_of_scored_exons>
        <coverage percentage="0.975" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276686" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24096" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT</genome_strand>
        <mrna_strand>ATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E274792" ref_strand="+" ref_description="SGN-E274792 [cLEN-13-I18]">
      <seq>attgtgttggaatcagctgattcgttgcgagctactggatttgcattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctaatgatgagaagagtttatactggttttgcacattcacaccatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23796" stop="25676"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24096" g_stop="24226" g_length="131"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="131" r_length="131" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="197" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="363" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25155" g_stop="25376" g_length="222"/>
          <reference_exon_boundary r_type="cDNA" r_start="364" r_stop="585" r_length="222" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E274792" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274792" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24096" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCT</genome_strand>
        <mrna_strand>ATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAATGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E581479" ref_strand="+" ref_description="SGN-E581479 [6688]">
      <seq>ttggaatcagcagattcattgcgagctactggatttgcgttggcattgtggactaatgcctggagagctttggatgcattgggcattggggactctcttagacaacgttccttatccattactgggtttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgtgattagatattcttccaaagtcgattccattgaagaatctggaccattgaaattggtacatcttgcagatggttccactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatccggaaaaacatggttatcagcctaagttccacgcgtattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttgtactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatcaatgaaattgaagcaattcgtgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23802" stop="26064"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24102" g_stop="24226" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="191" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="357" r_length="166" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="589" r_length="232" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25714" g_stop="25764" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="590" r_stop="639" r_length="50" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E581479" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>640</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E581479" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24102" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGA</genome_strand>
        <mrna_strand>TTGGAATCAGCAGATTCATTGCGAGCTACTGGATTTGCGTTGGCATTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGTGATTAGATATTCTTCCAAAGTCGATTCCATTGAAGAATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTCCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCGGAAAAACATGGTTATCAGCCTAAGTTCCACGCGTATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTGTACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGAT-CAATGAAATTGAAGCAATTCGTGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E581341" ref_strand="+" ref_description="SGN-E581341 [6584]">
      <seq>ttggaatcagcagattcattgcgagctacttggatttgcgttggcattgtggacttaatgcctgggagagctttggatgcattgggcattggggactctcttagacaacgttccttatccattactgggtttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgtgattagatattcttccaaagtcgattccattgaagaatctggaccattgaaattggtacatcttgcagatggttccactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatccggaaaaacatggttatcagcctaagttccacgcgtatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23802" stop="25599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24102" g_stop="24226" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="194" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="360" r_length="166" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25155" g_stop="25299" g_length="145"/>
          <reference_exon_boundary r_type="cDNA" r_start="361" r_stop="505" r_length="145" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E581341" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>502</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E581341" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24102" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAATCAGCTGATTCGTTGCGAGCTAC-TGGATTTGCATTGGCGTTGTGGACT-AATGCCT-GGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATT</genome_strand>
        <mrna_strand>TTGGAATCAGCAGATTCATTGCGAGCTACTTGGATTTGCGTTGGCATTGTGGACTTAATGCCTGGGAGAGCTTTGGATGCATTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGTGATTAGATATTCTTCCAAAGTCGATTCCATTGAAGAATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTCCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCGGAAAAACATGGTTATCAGCCTAAGTTCCACGCGTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E581480" ref_strand="+" ref_description="SGN-E581480 [6688]">
      <seq>ttcattgcgagctactggatttgcgttggcattgtggactaatgcctggagagctttggatgcattgggcattggggactctcttagacaacgttccttatccattactgggtttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgtgattagatattcttccaaagtcgattccattgaagaatctggaccattgaaattggtacatcttgcagatggttccactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatccggaaaaacatggttatcagcctaagttccacgcgtattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttgtactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaatgaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23816" stop="26047"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24116" g_stop="24226" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.979" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="177" r_length="66" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="343" r_length="166" r_score="0.952"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="575" r_length="232" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25714" g_stop="25747" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="576" r_stop="609" r_length="34" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E581480" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E581480" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24116" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25747"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATT</genome_strand>
        <mrna_strand>TTCATTGCGAGCTACTGGATTTGCGTTGGCATTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGTGATTAGATATTCTTCCAAAGTCGATTCCATTGAAGAATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTCCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCGGAAAAACATGGTTATCAGCCTAAGTTCCACGCGTATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTGTACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E706593" ref_strand="+" ref_description="SGN-E706593 [FA30BF01]">
      <seq>cattggcgttgtggactaatgcctggagagctttggatgcattggacattggggactctcttagacaacgttctttatccattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtangtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttaaaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataaccgaacaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23839" stop="26329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24139" g_stop="24226" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="88" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="89" r_stop="154" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="320" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="552" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25714" g_stop="26029" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="868" r_length="316" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E706593" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>868</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E706593" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24139" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="26029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGA</genome_strand>
        <mrna_strand>CATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTANGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAAAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACCGAACAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E624319" ref_strand="+" ref_description="SGN-E624319 [GI|24745926]">
      <seq>gcctggagagctttggatgcattgggcattggggactctcttagacaacgttccttatcaattactgggcttaaaagtttctcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgttgagtatgaaagtcgttgtgtgaggagaaaagatatgttggagacattagctaatgaactgcctcaaggtgcgattagatattcttcaaaggtcgattccattgaagaatctggaccattgaaattggtacatcttgcagatggttccactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtttccggaaaaacatggttatcagcctaagttccacgcgtattttggaggtggagttcgatttggctttcttcctagtgatgagaagagtttgtactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaatgaaattgaagcaattcgtgttgaacaaggctagtaatgtgtctaaagaactctccaccattgtagacagaactacactcgactgtatatctattgctcagctgaaattgagattgccatggaatgttctgcttgggaatattttgaaaaataacgtttgcgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgcctcggagaagccttgataaaaccgataacaaaacaagaagatgatgaatctacgaagattagaaaaggactcgagaagtatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagacagtgataacaagataatcagtttcttaagacaacattttttggctggagttactatatcggttacactaagaatagctaacttcgactgcggaagattaactgttttttagtagctcatttggatcctttagaagctatgaatatcctttatggactttgtttaatatctatccagcatacatgttctggtttagttgtgtctaagaattgtaataccgaaacggatcctttttttgcaataataaaatacaagttgtgagcaaccaattgtgtacttcatcaaagatatccaacaacatcagttgtttataagtaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23859" stop="150115"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24159" g_stop="24226" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.979" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="134" r_length="66" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="300" r_length="166" r_score="0.940"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="301" r_stop="532" r_length="232" r_score="0.974"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25714" g_stop="26385" g_length="672"/>
          <reference_exon_boundary r_type="cDNA" r_start="533" r_stop="1202" r_length="670" r_score="0.939"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="26386" i_stop="29131" i_length="2746">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.358" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="29132" g_stop="29145" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="1203" r_stop="1214" r_length="12" r_score="0.714"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="29146" i_stop="29327" i_length="182">
            <donor d_prob="0.960" d_score="0.00"/>
            <acceptor a_prob="0.564" a_score="0.55"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="29328" g_stop="29369" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="1215" r_stop="1254" r_length="40" r_score="0.548"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="29370" i_stop="30026" i_length="657">
            <donor d_prob="0.968" d_score="0.55"/>
            <acceptor a_prob="0.000" a_score="0.67"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="30027" g_stop="30065" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1255" r_stop="1294" r_length="40" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E624319" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>1299</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E624319" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24159" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="26385"/>
          <exon e_start="29132" e_stop="29145"/>
          <exon e_start="29328" e_stop="29369"/>
          <exon e_start="30027" e_stop="30065"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTATTTTGCAATAATGAAATTGTGTACTACATCAAAGATATCCAAGAACATCAGTTGTTTAGAAGCAAATATGGTAACATCTGCATTTTATAATTATCATGGAATAGAATAAGTGTTTTCTTATCTGAGATTATTTTGTGCAATTAGATATACTTCATCTATTTCAACTTGTTTATCTGATTTTGATTTGACACGAAGTTTAAGAAAGTAAAGAAATTTTCTTTATCTTAGCGTGGACCACTACTTTGGTTCAATGACTTCCAAATTACACAAGGTATCATTGTTTTGTTACATACTCTAAGTAGATAATCTGAGTAGATGTAGGAGGAAATGCAGGTGTCAAATCATGTCTTTAATTAATGTTGTATAGTTTCTCATTGGAAATTTGTTAGAAGTCTGCAGAGAATTTCTGTACAGGGTGTGTTACGTAATGGGACCAATTCACATCGTCTAGCGTAACACACACTGCAAAGATAGTCGATGACCTCGAAATGAAAACAATATTTACAGAAAGTTAGAACATAGTGAGTATTATTTGGTGAAGTATCTTCGTCCTCTAAAAAGTAGGGTTTAGGTTTTCGAGTTTGGGGTTTCGAGTTTAGGGTTTAAAGGACCTGGTCCCTGGACTCTTGGTGGCTTCATATGATTCATGACTCAATCCTTAACTGGTTTGGCAATATGAGATGAGATTCATTGTCGTACCTAAACCTTTACATAATTCACCTACGGGATATATATTATAGATCTCGTATAATATTAACAAGCAATGTTGGAATAATGTCATGAATAAGAACCTTGTTATTCTTAGCATTTGCTTCAACTACTGCTTTAGTTATTTTCCATCTCATCATATTTGAAAAATTCCACATGGTATCATTAATTCACATTGTCTTTGGTGACACGAACGGCAGAGATAGTCGATGACCTCGAAATGGAAACATTATTTAGAGAAAACAAATAAGGAATAATTGGTACTAGCCACCAAGAGTGAAACATTTAATTGAAATTTTGTTTATAACTAATAATTTGAGATTTATAGTTAATAGCGTGAAAGTAATTAATTCTAGCATAAAAACTCACATTTGATGTTTCTTGTCATAGTACTGTTAAAAATTTAATTATGACGGATCATCTGTGACTTGTTAATTGGTCATGTTATCGGATTGGAACTTAGTTGCAGTCTGCCTAATTTAATATATGGAAAAAAATAATTGAACTTTTTCCTAAATTTTTTCCCATTTGTAATAATAATAATAATAATAATTTTTTTATATTATGTTTTTAATAAAAGTTGGTTTTTTAAGAAATCGTAATTGACTCTTGTTTTTTCATATTCTCTTTCTAATAAATAACTTACAATTCAAAAATAATTAAAAAAATATTATTTAATTAATTAGATGTTTAATTTAGTCTAGGGATAAAATAATAATTTAATTTTTCATCTTTGGAGCTTCCCATTTGTAATAATACTAGTCTTGGTTACGTGCATTTGCACGTATATATATTCTATTAATTATATTTTAATGCTAGTTTCCAAAGATAATAAATCATATATTTTAATAGAGTTATATTTATAGAGTTCAAATATAAATTAATAGTTACTTTATGTTAAACATGTATACATGTTAGTCTATGATGCAAAAGAATACAATATTTTTTAAAAATGTATTTCTTTATAGTAGATTTGAGAATAATAAGTTACATGTAAATGCTTTTTTTTTTTTGGTTTCCCACCCGGTGTTTGGTTACATGTAAATGCTTCCTTGTCCACTTGCATTTGTTCATTTGACAGGCCCTACACCCATTTAAACAATTTAGTGATCCACCCACGTAATCCGATCCATTAAAAAACATGATATGACCTATTTTATTTTGTCTTTAATCCTAATTCAAGGTTTAAAGAGAGAGATTAATTTAGGATTAAAGATAAAATAAAATGGGTCATATCATATTTTTTAATGGGTCGGGTTAGGTGGGTGGATCACTAAATGATTTAATTTATTTTTTAAAATTTTTGGTTTGTTATATAAATAATTAATATCAATAAATTTTAATTAAAAAATAATTTAATAGATTGAGTGACTTTCTGAGGAAAGAGTGAATAGTTGAGTGACTTTTGAGTTAAAATTCAAAGTTGAGTGACTTTCAGAGAAAGAAGTGCATAGTTGAGTGACTTTTGAGTAAAAATTGAAAGTTGAGTGACTTTCTGAGAGAAGAGTGCATAGTTGAGTGACCATCTGAGGTATTAACTCTACACATTCATATAAATATTTATTAAGAAACACTATAAATTATCATAAGTTTACATATTTAAAATTTGAGAGTTATGAGGAGTTGTAAAGATTATGGAAATATAAATTTAGAGCCTAAGATTCTGTGGTCAAGAATTGATCTCTTGAACATGACTAACTAAAAAGCAAGAAAAAATCATTATACATAATTCATAAGATTTTCCTCTATCATGAGTACATCAAATATGAATGACAATACAATAACATTTGCTTAAAAAAAGATTGTCCTACAATACACATTTATATAGATATTCATTGAGAAACACAATATATTATCATAAGTTTACACATTTAAAATTTGAGAGTTATGAGGAGTTATAGAGATTATAGAAATATAAGTTATGAAGATAAAGAAATACATATTTCTTAGTTTAAGAAGGGAAAATTAATGAGATAATTTTAGAGAATGCTAAATTCAAAGTTCCAATTATGTTTGTAAGATTAGTTTCTCCCTTATATATTTAATAGGAGAAAATGAAAAGGTAAGAAACTTAAAATGTTAATAACAACAAATTACAATAAAAAAGTTCTCTAATCGAAATTAATTTTATTAGTCACAAATTTACATATCATTACTAACTTAAAAAATACGTTGTTTCGGATTTTCATAAAGACACCTTAACTTTGTGACTGTCCTATTACATCACTAAACAATTTTGAACAGATGTTATCATACCATTTTTCGATCAGCCCTAAATTTTAACAAGCAAGTGAGTTCACACCCCAATCATTACGTGACACGTGTTAATTAAAATTATTAAAAAAAATTCATTTAAAATTTTTCCTTTATCTCTTTCTTTTTTTATTTTTCTCTCTCTTACTTTTAAATTTTAATTTTGATTTATCTTAAATTTCATTTAATCTTCCACCTTCCACTTTCATCCCTTCATTTTCTTTTTTTCTTCACCCTCCAGCCTCCCATGTCAAATTGAAACTCATTTTCATTTTCTTCTTCTTTTTTGTTCTTCTTCTCCAGTCAAATTCTTTATAAAATTCATACAATTATTTAAACTTTATTGAATTATTGATAACAAAATTAATTATTTTTTAAGAAAATCTAAAAGTACGAAGGTATTATCAACTACTCATTTTCATATACATTCAAAATTAGAAATGGAAATTTTAAAAGAATCAATGAATTTCTCAAAAATTGAAAGAACTTAATTGAAGTTGAATAAAAAAACTATATGATGATTCCTAATCATCTTCAAATCTAATGAATTTATCGAATTGTTCGAAATGTAAAAAAATATTTAGATAAAATTTTAAAACTAAAGAGAGTAAAACTAATAGTAATAAAAAGTAAAAAGTGAAGTTGTGGTAAAAATGATATTGAACATAAGAAGTTTCAATGGACGGAGATGAAAATCAATT-TTGAAAAGAAAGAGAAAAATAAAAAGGA</genome_strand>
        <mrna_strand>GCCTGGAGAGCTTTGGATGCATTGGGCATTGGGGACTCTCTTAGACAACGTTCCTTATCAATTACTGG..........................................................................................................................................GCTTAAAAGTTTCTCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGTATGAAAGTCGTTGTGTGAGGAGAAAAGATATGTTGGAGACATTAGCTAATGAACTGCCTCAAGGTGCGATTAGATATTCTTCAAAGGTCGATTCCATTGAAGAATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTCCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTTTCCGGAAAAACATGGTTATCAGCCTAAGTTCCACGCGTATTTTGGAGGTGGAGTTCGATTTGGCTTTCTTCCTAGTGATGAGAAGAGTTTGTACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATGAAATTGAAGCAATTCGTGTTGAACAAGGCTAGTAATGTGTCTAAAGAACTCTCCACCATTGTAGACAGAACTACACTCGACTGTATATCTATTGCTCAGCTGAAATTGAGATTGCCATGGAATGTTCTGCTTGGGAATATTTTGAAAAATAACGTTTGCGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTCGGAGAAGCCTTGATAAAACCGATAACAAAACAAGAAGATGATGAATCTACGAAGATTAGAAAAGGACTCGAGAAGTATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGACAGTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTGGCTGGAGTTACTATATCGGTTACACTAAGAATAGCTAACTTCGACTGCGGAAGATTAACTGTTTTTTAGTAGCT-CATTTGGATCCTTTAGAAGCTATGAATATCCTTTATGGACTTTGTTTAATATCTATCCAGCATACATGTTCTGGTTTAGTTGTGTCT-AAGAATTGTAATACCGAAACGGATCCTTTTTTTGCAATA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................-ATAAAAT-ACAAG......................................................................................................................................................................................TTGTGAGCA-ACCAATTGT-GTACTTCATCAAAGATATCCAA.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAACATCAGTTGTTTATAAGTAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E443785" ref_strand="+" ref_description="SGN-E443785 [cSTA-40-E1]">
      <seq>agagctttggatgcattgggcattggggactctcttatacaacgctccttatccagaattgggcttaaaagaatatcagcggattcaggtgcacctatcaaggaggtatcatttgtggggaataacagtgttgagtatgaaagtcgttgtgtgaggagaaaagatctgttggagacattagctaatgaactgcctcaaggcgcgattagatattcttccaaagtcgattccattgaagaatctggaccattgaaattggtacatcttgcagatggttccactattagaaccaaggccttaattgggtgtgacgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23865" stop="25474"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24165" g_stop="24226" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.887"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.86"/>
            <acceptor a_prob="0.979" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="128" r_length="66" r_score="0.909"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.972" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="294" r_length="166" r_score="0.946"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25155" g_stop="25174" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="314" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E443785" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>314</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E443785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24165" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25174"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGG</genome_strand>
        <mrna_strand>AGAGCTTTGGATGCATTGGGCATTGGGGACTCTCTTATACAACGCTCCTTATCCAGAATTGG..........................................................................................................................................GCTTAAAAGAATATCAGCGGATTCAGGTGCACCTATCAAGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTTGAGTATGAAAGTCGTTGTGTGAGGAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCGATTAGATATTCTTCCAAAGTCGATTCCATTGAAGAATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTCCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E256868" ref_strand="+" ref_description="SGN-E256868 [cLEG-40-B16]">
      <seq>cattactgggtttaaaagtttctcagcggaatcaggtgcacctatcacggaggtatcatttgtggggaataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24064" stop="25346"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24218" g_stop="24226" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24365" g_stop="24430" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="75" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24890" g_stop="25046" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="232" r_length="157" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E256868" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>232</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24218" e_stop="24226"/>
          <exon e_start="24365" e_stop="24430"/>
          <exon e_start="24890" e_stop="25046"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTACTGGGTGAGTTACCTCTATATTATTAGTTAGGATTTACGATTACTAGCAACTTGAAGTTCAATTTCGTATTTTTATGGTCAAATGTGTTTTGCGGAGTTCTAGCTCTGAAAAATAACGTTACTGATTGTCCAAAATGTGCAGGTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAGGTTAGCGTTATATCAATTTTCGTATTAGTTGGGGTCGGTTATATAAGTCCTTTTATCTATTCGTTTTATGTATCTTCATTTTCTTCTAAACACTTGATAATTTAGTTTGTAAGGCAAATTCGAATCTGAACTCTATATAGAGATGTATAAATTTCTAACCATCGATTTAAAAGTTCCTCACAAACGTCGAAGTAATTCAAGTACAGTAAGAACCAGTAACGTATTTAACCTCCGGTTCTCACAGCATCGATATTTGTAGAGAACAATCACATCTGTTTACGAAGGACTTATGAATCAAGGATGCTGCATACTGAATTTTCTAAATTGTTCACTAGTACTGAGTTGACGTGGTTTTGTATGTCTTTCTTCCGACTATTGGATGGACTGATCATTCGTCAGCTAACATTTTCTATTTTTGAAGTCAATAGTCATCTAAGGTCAGTTATATTATCGTTGCAGTGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATT</genome_strand>
        <mrna_strand>CATTACTGG..........................................................................................................................................GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E259560" ref_strand="+" ref_description="SGN-E259560 [cLEG-42-B24]">
      <seq>aataacagtgtggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24587" stop="26150"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24890" g_stop="25055" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="174" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="406" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25714" g_stop="25850" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="543" r_length="137" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E259560" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E259560" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24890" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25850"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTG</genome_strand>
        <mrna_strand>TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E210178" ref_strand="+" ref_description="SGN-E210178 [cLEC-40-C21]">
      <seq>ggagtatgaaagtcgttgtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaatttaaagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24593" stop="26217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24893" g_stop="25055" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="163" r_length="163" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="164" r_stop="395" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25714" g_stop="25917" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="599" r_length="204" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E210178" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>599</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E210178" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24893" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCAC</genome_strand>
        <mrna_strand>GGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTTAAAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E256793" ref_strand="+" ref_description="SGN-E256793 [cLEG-40-E2]">
      <seq>gtgtgagaagaaaagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24610" stop="26059"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24910" g_stop="25055" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="378" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25714" g_stop="25759" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="424" r_length="46" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E256793" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>424</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256793" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24910" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="25759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGT</genome_strand>
        <mrna_strand>GTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E708164" ref_strand="+" ref_description="SGN-E708164 [FA35AB02]">
      <seq>caatagatctgttggagacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaacttcgactgcggaaaactagctgtttcttagtagctccaattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24620" stop="26564"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24919" g_stop="25055" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="369" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25714" g_stop="26264" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="370" r_stop="920" r_length="551" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E708164" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>920</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E708164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24919" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="26264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTG</genome_strand>
        <mrna_strand>CAATAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E697617" ref_strand="+" ref_description="SGN-E697617 [FA03CD11]">
      <seq>cggtgacattagctaatgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataaccagaacaagaagacgatgaatctatgaggattaaaaaaggactccagaaatatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24632" stop="26375"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24931" g_stop="25055" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="357" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25714" g_stop="26075" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="720" r_length="363" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E697617" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>719</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E697617" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24931" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="26075"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAA-CAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCT</genome_strand>
        <mrna_strand>CGGTGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACCAGAACAAGAAGACGATGAATCTATGAGGATTAAAAAAGGACTCCAGAAATATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E699353" ref_strand="+" ref_description="SGN-E699353 [FA09DA03]">
      <seq>atgaactgcctcaaggcgctattagatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattagaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaacttcgactgcggaaaactagctgtttcttagtagctccaattgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24646" stop="26566"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24946" g_stop="25055" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="342" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25714" g_stop="26266" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="895" r_length="553" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E699353" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>895</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E699353" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24946" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="26266"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGA</genome_strand>
        <mrna_strand>ATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E710476" ref_strand="+" ref_description="SGN-E710476 [FA55CB12]">
      <seq>cgctctattacatattcttctaaggtagattccgttgaagtatctggaccattgaaattggtacatcttgcagatggttgcactattacaaccaaggccttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcacaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcatcctaagttccacgcatattttggaggtggagatcggtttggatttcttcctattgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcacaacaacatccaattaaattgaagcaattcttgttgaacaaggccagtaatgtgtctaaagaactctccaccgttataaacagaacaactctcgactctatatctattgctcagctgaaattgatagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcgaggaggatgttctgctttataggacagtgttgttatcgcatagtgccttgcacaagccttgataaaaccgataacagaacaaaaagacgatgaatctatgacgattagaaaaggactcaagaaatatgctacagacaggagatggagaagttttacatttatcagagctgcttatttatctggtttcatacccgagactgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24661" stop="26447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24960" g_stop="25055" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25155" g_stop="25386" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="328" r_length="232" r_score="0.983"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25714" g_stop="26147" g_length="434"/>
          <reference_exon_boundary r_type="cDNA" r_start="329" r_stop="762" r_length="434" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E710476" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E710476" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24960" e_stop="25055"/>
          <exon e_start="25155" e_stop="25386"/>
          <exon e_start="25714" e_stop="26147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGAT</genome_strand>
        <mrna_strand>CGCTCTATTACATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTACAACCAAG...................................................................................................GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCACAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCATCCTAAGTTCCACGCATATTTTGGAGGTGGAGATCGGTTTGGATTTCTTCCTATTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCACAACAACATCCAATTAAATTGAAGCAATTCTTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAAACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGATAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCGAGGAGGATGTTCTGCTTTATAGGACAGTGTTGTTATCGCATAGTGCCTTGCACAAGCCTTGATAAAACCGATAACAGAACAAAAAGACGATGAATCTATGACGATTAGAAAAGGACTCAAGAAATATGCTACAGACAGGAGATGGAGAAGTTTTACATTTATCAGAGCTGCTTATTTATCTGGTTTCATACCCGAGACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E463086" ref_strand="+" ref_description="SGN-E463086 [cPRO-13-F21]">
      <seq>gttaattgggtgtgacggagtcaattctgtggtggcaaactggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatccggaaaaacatggttatcagcctaagttccacgcgtattttggaggtggagttcgatttggctttcttcctagtgatgagaagagtttgtactggttttgcacattcacaccatctgttgttcattgtaagccagctcctacataccgtttgttttgaaattttactttttgaaggatatttttgttggctagagaggttacctctctgaagggggagccttgacgtaattggtaaagttattgtcatgtgacgtagagattacggatttgagctgtggaaacagcctcttgcagaaatgtagggtaagactgcgtacaatagacccctgtggtccagaccttccccgaaccctgtgcatagtgggagcttagtgcaccgagcagcccagatagcttacatttcataaactagtcatgtttagttgttcattttaattgggattttatgcagttgatggaaatgcagaacaagatccaatgaaattgaagcaattcgtgttgaacaaggctagtaatgtgtctaaagaactctccaccattatagacagaactacgcttgactgtatatctatcgctcagctgaaattgagattgccatggaatgttctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24858" stop="26171"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25157" g_stop="25872" g_length="716"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="715" r_length="715" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E463086" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E463086" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25157" e_stop="25872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGT</genome_strand>
        <mrna_strand>GTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCGGAAAAACATGGTTATCAGCCTAAGTTCCACGCGTATTTTGGAGGTGGAGTTCGATTTGGCTTTCTTCCTAGTGATGAGAAGAGTTTGTACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCAGCTCCTACATACCGTTTGTTTTGAAATTTTACTTTTTGAAGGATATTTTTGTTGGCTAGAGAGGTTACCTCTCTGAAGGGGGAGCCTTGACGTAATTGGTAAAGTTATTGTCATGTGACGTAGAGATTACGGATTTGAGCTGTGGAAACAGCCTCTTGCAGAAATGTAGGGTAAGACTGCGTACAATAGACCCCTGTGGTCCAGACCTT-CCCCGAACCCTGTGCATAGTGGGAGCTTAGTGCACCGAGCAGCCCAGATAGCTTACATTTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATGAAATTGAAGCAATTCGTGTTGAACAAGGCTAGTAATGTGTCTAAAGAACTCTCCACCATTATAGACAGAACTACGCTTGACTGTATATCTATCGCTCAGCTGAAATTGAGATTGCCATGGAATGTTCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E252391" ref_strand="+" ref_description="SGN-E252391 [cLEG-12-B11]">
      <seq>tggcttgggcttcagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattgtaagccacctcttacataccgtttcttttgaagatttactttttgaaggatattggtgttggctagagagcttaactctctgaagtgggagccttgacgtaattggtaaagttactgtcatgtgacctagaggttacggatccgagctgtagaaacagcctcttgcagaaatgcaggttaagattgcatacattagttccctgtggtccaggccttcccccgaaccctgtgcatagcaggcgcttagtgcaccgagctgtctagatatcttacatctcataaactagtcatgtttagttgttcattttaattgggattttatgcagttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24897" stop="26066"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25197" g_stop="25766" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="570" r_length="570" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E252391" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>570</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25197" e_stop="25766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAAC</genome_strand>
        <mrna_strand>TGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E702813" ref_strand="+" ref_description="SGN-E702813 [FA19DB01]">
      <seq>cagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaacttcgactgcggaaaactagctgtttcttagtagctccaattggatcctttagaggctatgaatatcttttatggactttgtttaatatctatctagcatacatgttccggtttagttgtgtctaaagaattgtaagaccgagtcggatccttatttttgcataatgaaattgtgtactacatcaaagatatccaagaacatcagttgtttagaagcaaatatggtaacatctgcattttataattat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24909" stop="26769"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25209" g_stop="25386" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26469" g_length="756"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="934" r_length="756" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E702813" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>934</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E702813" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25209" e_stop="25386"/>
          <exon e_start="25714" e_stop="26469"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTATTTTGCAATAATGAAATTGTGTACTACATCAAAGATATCCAAGAACATCAGTTGTTTAGAAGCAAATATGGTAACATCTGCATTTTATAATTAT</genome_strand>
        <mrna_strand>CAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTATTTTTGCATAATGAAATTGTGTACTACATCAAAGATATCCAAGAACATCAGTTGTTTAGAAGCAAATATGGTAACATCTGCATTTTATAATTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E700391" ref_strand="+" ref_description="SGN-E700391 [FA12DH11]">
      <seq>cagaaacctgtctattctgggcgctctgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaacttcgactgcggaaaactagctgtttcttagtagctccaattggatcctttagaggctatgaatatcttttatggactttgttttatatctatctagcatacatgttccggtttagttgtgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24909" stop="26645"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25209" g_stop="25386" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="178" r_length="178" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26345" g_length="632"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="810" r_length="632" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E700391" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>810</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E700391" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25209" e_stop="25386"/>
          <exon e_start="25714" e_stop="26345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCT</genome_strand>
        <mrna_strand>CAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTTATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E257290" ref_strand="+" ref_description="SGN-E257290 [cLEG-46-J23]">
      <seq>tgcaattagaggctttgttgagtatcccgaaaaacatggttatcagcctaagttccacgcatattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaacttcgactgcngaaaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24935" stop="26539"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25235" g_stop="25386" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26239" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="678" r_length="526" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E257290" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E257290" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25235" e_stop="25386"/>
          <exon e_start="25714" e_stop="26239"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACT</genome_strand>
        <mrna_strand>TGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCNGAAAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E214955" ref_strand="+" ref_description="SGN-E214955 [cLEC-78-P21]">
      <seq>atattttggaggtggagttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="24995" stop="26524"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25295" g_stop="25386" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26224" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="603" r_length="511" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E214955" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>603</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214955" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25295" e_stop="25386"/>
          <exon e_start="25714" e_stop="26224"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTT</genome_strand>
        <mrna_strand>ATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E355445" ref_strand="+" ref_description="SGN-E355445 [cTOS-25-O8]">
      <seq>ttcggtttggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacnagagactgataacaagataatcagtttcttaagacaacatttttttaggtggangtactatatcagttacactnaaaattgctaacttcgactgcggaaaactagctgtttcttagtagctccaattggatcctttagaggctatgaatatnctttatggactttgtttatatctatctagcatacatgttccggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25012" stop="26633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25312" g_stop="25386" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="75" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26333" g_length="620"/>
          <reference_exon_boundary r_type="cDNA" r_start="76" r_stop="695" r_length="620" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E355445" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E355445" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25312" e_stop="25386"/>
          <exon e_start="25714" e_stop="26333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACA-TTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGT</genome_strand>
        <mrna_strand>TTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACNAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTTAGGTGGANGTACTATATCAGTTACACTNAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATNCTTTATGGACTTTGTTT-ATATCTATCTAGCATACATGTTCCGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E256324" ref_strand="+" ref_description="SGN-E256324 [cLEG-37-A18]">
      <seq>ggatttcttcctagtgatgagaagagtttatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25020" stop="26444"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25320" g_stop="25386" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26144" g_length="431"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="498" r_length="431" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E256324" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256324" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25320" e_stop="25386"/>
          <exon e_start="25714" e_stop="26144"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACT</genome_strand>
        <mrna_strand>GGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E457836" ref_strand="+" ref_description="SGN-E457836 [cPRO-3-J14]">
      <seq>cttcctagtgatgagaagagtttgtactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaatgaaattgaagcaattcgtgttgaacaaggctagtaatgtgtctaaagaactctccaccgttatagacagaactacgctcgactgtatatctatcgctcagctgaaattgagattgccatggaatgttctgtttgggaatattttgaaaaatagcgtttgcgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgcctcggagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaagattagaaaaggactagagaagtatgctaaagagagaagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagagtgataacaagataatcagtttcttaagacaacaatttttggctggagtcactatatcagttacactaagaattgctaacttcgactgcggaagattaactgtttcttagtagctcaattggatcctttagaagctatgaatatcctttatggactttgtttaatatctatctagtagcatacatgttctggtttagttatgtctaagaattgtaagatcgaatcggatccttattttgcaaataataaattgtgtccttcatcaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25026" stop="26712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25326" g_stop="25386" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26418" g_length="705"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="767" r_length="706" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E457836" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E457836" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25326" e_stop="25386"/>
          <exon e_start="25714" e_stop="26418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATC---TAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTATTTTGCAATAATGAAATTGTGTACTACATCAAAGATATCCAAG</genome_strand>
        <mrna_strand>CTTCCTAGTGATGAGAAGAGTTTGTACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATGAAATTGAAGCAATTCGTGTTGAACAAGGCTAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACTACGCTCGACTGTATATCTATCGCTCAGCTGAAATTGAGATTGCCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAGCGTTTGCGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTCGGAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAAGATTAGAAAAGGACTAGAGAAGTATGCTAAAGAGAGAAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGAGTGATAACAAGATAATCAGTTTCTTAAGACAACAATTTTTGGCTGGAGTCACTATATCAGTTACACTAAGAATTGCTAACTTCGACTGCGGAAGATTAACTGTTTCTTAGTAGCT-CAATTGGATCCTTTAGAAGCTATGAATATCCTTTATGGACTTTGTTTAATATCTATCTAGTAGCATACATGTTCTGGTTTAGTTATGTCT-AAGAATTGTAAGATCGAATCGGATCCTTATTTTGCAAATAATAAATTGTGTCCTTCATCAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E429735" ref_strand="+" ref_description="SGN-E429735 [STM-52-F19]">
      <seq>cttcctagtgatgagaagagtttgtactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaatgaaattgaagcaattcgtgttgaacaaggctagtaatgtgtctaaagaactctccaccgttatagacagaactacgctcgactgtatatctatcgctcagctgaaattgagattgccatggaatgttctgtttgggaatattttgaaaaatagcgtttgcgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgcctcggagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaagattagaaaaggactagagaagtatgctaaagagagaagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagagtgataacaagataatcagtttcttaagacaacaatttttggctggagtcactatatcagttacactaagaattgctaacttcgactgcggaagattaactgtttcttagtagctcaattggatcctttagaagctatgaatatcctttatggactttgtttaatatctatctagtagcatacatgttctggtttagttatgtctaagaatttgtagatcgaatcggatccttatttttgcaatataaaattgtgtccttcatcaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25026" stop="26620"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25326" g_stop="25386" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26412" g_length="699"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="761" r_length="700" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E429735" ref_strand="+">
        <total_alignment_score>0.932</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25326" e_stop="25386"/>
          <exon e_start="25714" e_stop="26412"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATC---TAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTA-TTTTGCAATAATGAAATTGTGTACTACATCAAAGATA</genome_strand>
        <mrna_strand>CTTCCTAGTGATGAGAAGAGTTTGTACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATGAAATTGAAGCAATTCGTGTTGAACAAGGCTAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACTACGCTCGACTGTATATCTATCGCTCAGCTGAAATTGAGATTGCCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAGCGTTTGCGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTCGGAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAAGATTAGAAAAGGACTAGAGAAGTATGCTAAAGAGAGAAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGAGTGATAACAAGATAATCAGTTTCTTAAGACAACAATTTTTGGCTGGAGTCACTATATCAGTTACACTAAGAATTGCTAACTTCGACTGCGGAAGATTAACTGTTTCTTAGTAGCT-CAATTGGATCCTTTAGAAGCTATGAATATCCTTTATGGACTTTGTTTAATATCTATCTAGTAGCATACATGTTCTGGTTTAGTTATGTCT-AAGAATTTGTAGATCGAATCGGATCCTTATTTTTGCAAT-ATAAAATTGTGTCCTTCATCAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E429736" ref_strand="-" ref_description="SGN-E429736 [STM-52-F19]">
      <seq>agtgatgagaagagttgntactggtttgncacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaatgaaattgaagcaattcgtgttgaacaaggctagtaatgtgtctaaagaactctccaccgttatagacagaactacgctcgactgtatatctatcgctcagctgaaattgagattgccatggaatgttctgtttgggaatattttgaaaaatagcgtttgcgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgcctcggagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaagattagaaaaggactagagaagtatgctaaagagagaagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagagtgataacaagataatcagtttcttaagacaacaatttttggctggagtcactatatcagttacactaagaattgctaacttcgactgcggaagattaactgtttcttagtagctcaattggatcctttagaagctatgaatatcctttatggactttgtttaatatctatctagtagcatacatgttctggtttagttatgtctaagaattgtaagatcgaatcggatccttattttgcaataataaaattgttccttcatcaaaaaaaaaaaagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25032" stop="26712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25332" g_stop="25386" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="0.927"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="0.92"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="26420" g_length="707"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="762" r_length="707" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E429736" ref_strand="-">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>762</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E429736" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="25332" e_stop="25386"/>
          <exon e_start="25714" e_stop="26420"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATC---TAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTATTTTGCAATAATGAAATTGTGTACTACATCAAAGATATCCAAGAA</genome_strand>
        <mrna_strand>AGTGATGAGAAGAGTTGNTACTGGTTTGNCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATGAAATTGAAGCAATTCGTGTTGAACAAGGCTAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACTACGCTCGACTGTATATCTATCGCTCAGCTGAAATTGAGATTGCCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAGCGTTTGCGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTCGGAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAAGATTAGAAAAGGACTAGAGAAGTATGCTAAAGAGAGAAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGAGTGATAACAAGATAATCAGTTTCTTAAGACAACAATTTTTGGCTGGAGTCACTATATCAGTTACACTAAGAATTGCTAACTTCGACTGCGGAAGATTAACTGTTTCTTAGTAGCT-CAATTGGATCCTTTAGAAGCTATGAATATCCTTTATGGACTTTGTTTAATATCTATCTAGTAGCATACATGTTCTGGTTTAGTTATGTCT-AAGAATTGTAAGATCGAATCGGATCCTTATTTTGCAATAATAAAATTGT-TCCTTCATCAAAAAAAAAAAAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E710665" ref_strand="+" ref_description="SGN-E710665 [FA56AF10]">
      <seq>gaggcccttattatatactggttttgcacattcacaccatctgttgttcattttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcacctgaaattgcgagcaccacggaatgtcctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25046" stop="26240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25335" g_stop="25386" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.846"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327">
            <donor d_prob="0.822" d_score="0.84"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25714" g_stop="25940" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="279" r_length="227" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E710665" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>279</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E710665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25335" e_stop="25386"/>
          <exon e_start="25714" e_stop="25940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTT</genome_strand>
        <mrna_strand>GAGGCCCTTATTATATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT.......................................................................................................................................................................................................................................................................................................................................TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCACCTGAAATTGCGAGCACCACGGAATGTCCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E375512" ref_strand="+" ref_description="SGN-E375512 [TUS-34-P18]">
      <seq>tttgaaggatattggtgttggctagagagcttaactctctgaagtgggagccttgacgtaattggtaaagttactgtcatgtgacctagaggttacggatccgagctgtagaaacagcctcttgcagaaatgcaggttaagattgcatacattagttccctgtggtccaggccttcccccgaaccctgtgcatagcaggcgcttagtgcaccgagctgtctagatatcttacatctcataaactagtcatgtttagttgttcattttaattgggattttatgcagttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgcttcagaggacagtgttgttatcgcatagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactccagaaatatgctaaagagaggagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25129" stop="26389"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25429" g_stop="26089" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="661" r_length="661" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E375512" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375512" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25429" e_stop="26089"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATG</genome_strand>
        <mrna_strand>TTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTCAGAGGACAGTGTTGTTATCGCATAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCCAGAAATATGCTAAAGAGAGGAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E369854" ref_strand="+" ref_description="SGN-E369854 [TUS-26-B7]">
      <seq>tttgaaggatattggtgttggctagagagcttaactctctgaagtgggagccttgacgtaattggtaaagttactgtcatgtgacctagaggttacggatccgagctgtagaaacagcctcttgcagaaatgcaggttaagattgcatacattagttccctgtggtccaggccttcccccgaaccctgtgcatagcaggcgcttagtgcaccgagctgtctagatatcttacattttattaactagtcatgtttagttgttcattttaattgggattttatgcagttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgcttcagaggacagtgttgttatcgcaaagtgccttgca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25129" stop="26297"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25429" g_stop="25997" g_length="569"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="569" r_length="569" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E369854" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>569</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369854" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25429" e_stop="25997"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCA</genome_strand>
        <mrna_strand>TTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATTTTATTAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTCAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E255349" ref_strand="+" ref_description="SGN-E255349 [cLEG-30-M6]">
      <seq>tttgaaggatattggtgttggctagagagcttaactctctgaagtgggagccgtgacgtggttggtaaagttactgtcatgtgacctagaggttacggatccgagctgtagaaacagcctcttgcagaaatgcaggttaagattgcatacattagttccctgtggtccaggccttcccccgaaccctgtgcatagcaggcgcttagtgcaccgagctgtctagatatcttacatctcataaactagtcatgtttagttgttcattttaattgggattttatgcagttgatggaaatgcagaacaagatccaattaaattgaagcaattcgtgttgaacaaggccagtaatgtgtctaaagaactctccaccgttatagacagaacaactctcgactctatatctattgctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgcttcagaggacagtgttgttatcgcaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25129" stop="26289"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25429" g_stop="25989" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E255349" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255349" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25429" e_stop="25989"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGT</genome_strand>
        <mrna_strand>TTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCGTGACGTGGTTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTCAGAGGACAGTGTTGTTATCGCAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E369984" ref_strand="+" ref_description="SGN-E369984 [TUS-26-N1]">
      <seq>tttttttttttcttggatatctttgatgtagtacacaatttcattattgcaaaataaggatccgactcggtcttacaattctttaaacacaactaaaccggaacatgtatgctagatagatattaaacaaagtccataaaagatattcatagcctttaaaggatccaattggagctactaaaaaacagctagttttccgcagtcgaagttagcaatttttagtgtaactgatatagtaactccacctaaaaaatgttgtcttaagaaactgattatcttgttatcagtctcttgtatgaaaccagataaataagcagcactgataaatgtaaaacttctccatctcctctctttagcatatttctcgagtccttttctaatcctcatagattcatcgtcttcttgttctgttatcggttttatcaaggcttctgcaaggcactttgcgataacaacactgtcctctaaagcagaacatccaccttgaccaagatcaggagtcatgggatgaagtgcatcacctaccacacagacgttatttttcaaaatattcccaaacagaacattccatggtactctcaatttcagctgagcaatagatatagagtcgagagttgttctgtctataacggtggagagttctttagacacattactggccttgttcaacacgaattgcttcaatttaattggatcttgttctgcatttccatcaactgcataaaatcccaattaaaatgaacaactaaacatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="26722" stop="25376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26429" g_stop="25676" g_length="754"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="754" r_length="754" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E369984" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>754</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369984" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26429" e_stop="25676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTGAGCAATAGATATAGAGTCGAGAGTTGTTCTGTCTATAACGGTGGAGAGTTCTTTAGACACATTACTGGCCTTGTTCAACACGAATTGCTTCAATTTAATTGGATCTTGTTCTGCATTTCCATCAACTGCATAAAATCCCAATTAAAATGAACAACTAAACATG</genome_strand>
        <mrna_strand>TTTTTTTTTTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAAACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTTTAAAGGATCCAATTGGAGCTACTAAAAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTGAGCAATAGATATAGAGTCGAGAGTTGTTCTGTCTATAACGGTGGAGAGTTCTTTAGACACATTACTGGCCTTGTTCAACACGAATTGCTTCAATTTAATTGGATCTTGTTCTGCATTTCCATCAACTGCATAAAATCCCAATTAAAATGAACAACTAAACATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E369909" ref_strand="+" ref_description="SGN-E369909 [TUS-26-P1]">
      <seq>tttttttttttcttggatatctttgatgtagtacacaatttcattattgcaaaataaggatccgactcggtcttacaattctttagacacaactaaaccggaacatgtatgctagatagatattaaacaaagtccataaaagatattcatagcctctaaaggatccaattggagctactaagaaacagctagttttccgcagtcgaagttagcaatttttagtgtaactgatatagtaactccacctaaaaaatgttgtcttaagaaactgattatcttgttatcagtctcttgtatgaaaccagataaataagcagcactgataaatgtaaaacttctccatctcctctctttagcatatttctcgagtccttttctaatcctcatagattcatcgtcttcttgttctgttatcggttttatcaaggcttctgcaaggcactttgcgataacaacactgtcctctaaagcagaacatccaccttgaccaagatcaggagtcatgggatgaagtgcatcacctaccacacagacgttatttttcaaaatattcccaaacagaacattccatggtactctcaatttcagctgagcaatagatatagagtcgagagttgttctgtctataacggtggagagttctttagacacattactggccttgttcaacacgaattgcttcaatttaattggatcttgttctgcatttccatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="26722" stop="25416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26429" g_stop="25716" g_length="714"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="714" r_length="714" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E369909" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369909" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26429" e_stop="25716"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTGAGCAATAGATATAGAGTCGAGAGTTGTTCTGTCTATAACGGTGGAGAGTTCTTTAGACACATTACTGGCCTTGTTCAACACGAATTGCTTCAATTTAATTGGATCTTGTTCTGCATTTCCATC</genome_strand>
        <mrna_strand>TTTTTTTTTTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTGAGCAATAGATATAGAGTCGAGAGTTGTTCTGTCTATAACGGTGGAGAGTTCTTTAGACACATTACTGGCCTTGTTCAACACGAATTGCTTCAATTTAATTGGATCTTGTTCTGCATTTCCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E263201" ref_strand="+" ref_description="SGN-E263201 [cLEG-62-H17]">
      <seq>tagtctcgagttttttttttttttttttcagataagaaaacacttattctattccatgataattataaaatgcagatgttaccatatttgcttctaaacaactgatgttcttggatatctttgatgtagtacacaatttcattattgcaaaataaggatccgactcggtcttacaattctttagacacaactaaaccggaacatgtatgctagatagatattaaacaaagtccataaaagatattcatagcctctaaaggatccaattggagctactaagaaacagctagttttccgcagtcgaagttagcaatttttagtgtaactgatatagtaactccacctaaaaaatgttgtcttaagaaactgattatcttgttatcagtctcttgtatgaaaccagataaataagcagcactgataaatgtaaaacttctccatctcctctctttagcatatttctcgagtccttttctaatcctcatagattcatcgtcttcttgttctgttatcggttttatcaaggcttctgcaaggcactttgcgataacaacactgtcctctaaagcagaacatccaccttgaccaagatcaggagtcatggggatgaagtgcatcacctaccacacagacgttatttttcaaaatattcccaaacagaacattccatggtactctcaatttcagctgagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76656" stop="25535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26903" g_stop="26881" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="0.609"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26880" i_stop="26506" i_length="375">
            <donor d_prob="0.596" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26505" g_stop="25835" g_length="671"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="694" r_length="672" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E263201" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>694</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E263201" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26903" e_stop="26881"/>
          <exon e_start="26505" e_stop="25835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTCACTATGTTCTAACTTTCTGTAAATATTGTTTTCATTTCGAGGTCATCGACTATCTTTGCAGTGTGTGTTACGCTAGACGATGTGAATTGGTCCCATTACGTAACACACCCTGTACAGAAATTCTCTGCAGACTTCTAACAAATTTCCAATGAGAAACTATACAACATTAATTAAAGACATGATTTGACACCTGCATTTCCTCCTACATCTACTCAGATTATCTACTTAGAGTATGTAACAAAACAATGATACCTTGTGTAATTTGGAAGTCATTGAACCAAAGTAGTGGTCCACGCTAAGATAAAGAAAATTTCTTTACTTTCTTAAACTTCGTGTCAAATCAAAATCAGATAAACAAGTTGAAATAGATGAAGTATATCTAATTGCACAAAATAATCTCAGATAAGAAAACACTTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCAT-GGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTGAGCA</genome_strand>
        <mrna_strand>TAGTCTCGA-GTTTTTTTTTTTT.......................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCAGATAAGAAAACACTTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTGAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E394206" ref_strand="+" ref_description="SGN-E394206 [TUS-42-H22]">
      <seq>gctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaacttcgactgcggaaaactagctgtttcttaatagctcccattggatcctttaaaggctataaatatccttttatggactttgtttaatatctatctagcatacatgtcccggttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25536" stop="26635"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25836" g_stop="26335" g_length="500"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="501" r_length="501" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E394206" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E394206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25836" e_stop="26335"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATAT-CTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTT</genome_strand>
        <mrna_strand>GCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAATAGCTCCCATTGGATCCTTTAAAGGCTATAAATATCCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTCCCGGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E394770" ref_strand="+" ref_description="SGN-E394770 [TUS-42-J21]">
      <seq>gctcagctgaaattcccagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaattgccttgcaaaaaccttgataaaacctataacagaacaagaagacgatgaatctatgaggattataaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcaaactagacactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcaattaccctaaaaattgctatcttccactgcggaaaactagctgtttcttaatagctccaattggatcctttaaaggctatgaatatcttttatggacttttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25553" stop="26603"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25836" g_stop="26304" g_length="469"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="469" r_length="469" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E394770" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>469</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E394770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25836" e_stop="26304"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTT</genome_strand>
        <mrna_strand>GCTCAGCTGAAATTCCCAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAATTGCCTTGCAAAAACCTTGATAAAACCTATAACAGAACAAGAAGACGATGAATCTATGAGGATTATAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCAAACTAGACACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAATTACCCTAAAAATTGCTATCTTCCACTGCGGAAAACTAGCTGTTTCTTAATAGCTCCAATTGGATCCTTTAAAGGCTATGAATATCTTTTATGGACTTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E255457" ref_strand="+" ref_description="SGN-E255457 [cLEG-30-K19]">
      <seq>ctcagctgaaattgagagtaccatggaatgttctgtttgggaatattttgaaaaataacgtctgtgtggtaggtgatgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaacttcgactgcggaaaactagctgtttcttagtagctccaattggatcctttagaggctatgaatatcttttatggactttgtttaatatctatctagcatacatgttccggtttagttgtgtctaaagaattgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25537" stop="26655"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25837" g_stop="26355" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E255457" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255457" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25837" e_stop="26355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGT</genome_strand>
        <mrna_strand>CTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254385" ref_strand="+" ref_description="SGN-E254385 [cLEG-27-A12]">
      <seq>tctcgagttttttttttttttttttctattccatgataattataaaatgcagatgttaccatatttgcttctaaacaactgatgttcttggatatctttgatgtagtacacaatttcattattgcaaaataaggatccgactcggtcttacaattctttagacacaactaaaccggaacatgtatgctagatagatattaaacaaagtccataaaagatattcatagcctctaaaggatccaattggagctactaagaaacagctagttttccgcagtcgaagttagcaatttttagtgtaactgatatagtaactccacctaaaaaatgttgtcttaagaaactgattatcttgttatcagtctcttgtatgaaaccagataaataagcagcactgataaatgtaaaacttctccatctcctctctttagcatatttctcgagtccttttctaatcctcatagattcatcgtcttcttgttctgttatcggttttatcaaggcttctgcaaggcactttgcgataacaacactgtcctctaaagcagaacatccaccttgaccaagatcaggagtcatgggatgaagtgcatcacctaccacacagacgttatttttcaaaatattcccaaacagaacattccatggtactctcaatttcagctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76656" stop="25539"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26900" g_stop="26881" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="20" r_length="20" r_score="0.550"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26880" i_stop="26485" i_length="396">
            <donor d_prob="0.596" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26484" g_stop="25839" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="21" r_stop="666" r_length="646" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E254385" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26900" e_stop="26881"/>
          <exon e_start="26484" e_stop="25839"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACTATGTTCTAACTTTCTGTAAATATTGTTTTCATTTCGAGGTCATCGACTATCTTTGCAGTGTGTGTTACGCTAGACGATGTGAATTGGTCCCATTACGTAACACACCCTGTACAGAAATTCTCTGCAGACTTCTAACAAATTTCCAATGAGAAACTATACAACATTAATTAAAGACATGATTTGACACCTGCATTTCCTCCTACATCTACTCAGATTATCTACTTAGAGTATGTAACAAAACAATGATACCTTGTGTAATTTGGAAGTCATTGAACCAAAGTAGTGGTCCACGCTAAGATAAAGAAAATTTCTTTACTTTCTTAAACTTCGTGTCAAATCAAAATCAGATAAACAAGTTGAAATAGATGAAGTATATCTAATTGCACAAAATAATCTCAGATAAGAAAACACTTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTG</genome_strand>
        <mrna_strand>TCTCGAGTTTTTTTTTTTTT............................................................................................................................................................................................................................................................................................................................................................................................................TTTTTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E286818" ref_strand="+" ref_description="SGN-E286818 [cLES-14-O1]">
      <seq>tgcacttcatcccatgactcctgatcttggtcaaggtggatgttctgctttagaggacagtgttgttatcgcaaagtgccttgcagaagccttgataaaaccgataacagaacaagaagacgatgaatctatgaggattagaaaaggactcgagaaatatgctaaagagaggagatggagaagttttacatttatcagtgctgcttatttatctggtttcatacaagagactgataacaagataatcagtttcttaagacaacattttttaggtggagttactatatcagttacactaaaaattgctaacttcgactgcggaaaactagctgtttcttagtagctccaattggatcctttagaggctatgaatatcttttatggactttgtttaatatctatctagcatacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="25613" stop="26625"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25913" g_stop="26325" g_length="413"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="413" r_length="413" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E286818" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E286818" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="25913" e_stop="26325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACAT</genome_strand>
        <mrna_strand>TGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254423" ref_strand="+" ref_description="SGN-E254423 [cLEG-27-F19]">
      <seq>tagtctcgagttttttttttttttttttcagataagaaaacacttattctattccatgataattataaaatgcagatgttaccatatttgcttctaaacaactgatgttcttggatatctttgatgtagtacacaatttcattattgcaaaataaggatccgactcggtcttacaattctttagacacaactaaaccggaacatgtatgctagatagatattaaacaaagtccataaaagatattcatagcctctaaaggatccaattggagctactaagaaacagctagttttccgcagtcgaagttagcaatttttagtgtaactgatatagtaactccacctaaaaaatgttgtcttaagaaactgattatcttgttatcagtctcttgtatgaaaccagataaataagcagcactgataaatgtaaaacttctccatctcctctctttagcatatttctcgagtccttttctaatcctcatagattcatcgtcttcttgttctgttatcggatttatcaaggcttctgcaaggcactttgcgataacaacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76656" stop="25672"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26903" g_stop="26881" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="0.609"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26880" i_stop="26506" i_length="375">
            <donor d_prob="0.596" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26505" g_stop="25972" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="556" r_length="534" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E254423" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E254423" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26903" e_stop="26881"/>
          <exon e_start="26505" e_stop="25972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTCACTATGTTCTAACTTTCTGTAAATATTGTTTTCATTTCGAGGTCATCGACTATCTTTGCAGTGTGTGTTACGCTAGACGATGTGAATTGGTCCCATTACGTAACACACCCTGTACAGAAATTCTCTGCAGACTTCTAACAAATTTCCAATGAGAAACTATACAACATTAATTAAAGACATGATTTGACACCTGCATTTCCTCCTACATCTACTCAGATTATCTACTTAGAGTATGTAACAAAACAATGATACCTTGTGTAATTTGGAAGTCATTGAACCAAAGTAGTGGTCCACGCTAAGATAAAGAAAATTTCTTTACTTTCTTAAACTTCGTGTCAAATCAAAATCAGATAAACAAGTTGAAATAGATGAAGTATATCTAATTGCACAAAATAATCTCAGATAAGAAAACACTTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACAC</genome_strand>
        <mrna_strand>TAGTCTCGA-GTTTTTTTTTTTT.......................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCAGATAAGAAAACACTTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGATTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E262720" ref_strand="+" ref_description="SGN-E262720 [cLEG-63-K10]">
      <seq>tagtctcgagttttttttttttttttttcagataagaaaacacttattctattccatgataattataaaatgcagatgttaccatatttgcttctaaacaactgatgttcttggatatctttgatgtagtacacaatttcattattgcaaaataaggatccgactcggtcttacaattctttagacacaactaaaccggaacatgtatgctagatagatattaaacaaagtccataaaagatattcatagcctctaaaggatccaattggagctactaagaaacagctagttttccgcagtcgaagttagcaatttttagtgtaactgatatagtaactccacctaaaaaatgttgtcttaagaaactgattatcttgttatcagtctcttgtatgaaaccagataaataagcagcactgataaatgtaaaacttctccatctcctctctttagcatatttctcgagtccttttctaatcctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76656" stop="25744"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26903" g_stop="26881" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="22" r_length="22" r_score="0.609"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26880" i_stop="26506" i_length="375">
            <donor d_prob="0.596" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26505" g_stop="26044" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="23" r_stop="484" r_length="462" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E262720" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E262720" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26903" e_stop="26881"/>
          <exon e_start="26505" e_stop="26044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTCACTATGTTCTAACTTTCTGTAAATATTGTTTTCATTTCGAGGTCATCGACTATCTTTGCAGTGTGTGTTACGCTAGACGATGTGAATTGGTCCCATTACGTAACACACCCTGTACAGAAATTCTCTGCAGACTTCTAACAAATTTCCAATGAGAAACTATACAACATTAATTAAAGACATGATTTGACACCTGCATTTCCTCCTACATCTACTCAGATTATCTACTTAGAGTATGTAACAAAACAATGATACCTTGTGTAATTTGGAAGTCATTGAACCAAAGTAGTGGTCCACGCTAAGATAAAGAAAATTTCTTTACTTTCTTAAACTTCGTGTCAAATCAAAATCAGATAAACAAGTTGAAATAGATGAAGTATATCTAATTGCACAAAATAATCTCAGATAAGAAAACACTTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCA</genome_strand>
        <mrna_strand>TAGTCTCGA-GTTTTTTTTTTTT.......................................................................................................................................................................................................................................................................................................................................................................................TTTTTTCAGATAAGAAAACACTTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E375511" ref_strand="+" ref_description="SGN-E375511 [TUS-34-P18]">
      <seq>tcagttttttttttttttttttttttttttgcttctaaacaactgatgttcttggatatctttgatgtagtacacaatttcattattgcaaaataaggatccgactcggtcttacaattctttaaacacaactaaaccggaacatgtatgctaaatagatattaaacaaagtccataaaagatattcatagcctctaaaggatccaattggagctactaaaaaacagctagttttccgcagtcgaagttagcaatttttagtgtaactgatatagtaactccacctaaaaaatgttgtcttaagaaactgattatcttgttatcagtctcttgtatgaaaccagataaataagcagcactgataaatgtaaaacttctccatctcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="150118" stop="25783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26468" g_stop="26083" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E375511" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26468" e_stop="26083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCC</genome_strand>
        <mrna_strand>TCAGTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAAACACAACTAAACCGGAACATGTATGCTAAATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAAAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E369853" ref_strand="+" ref_description="SGN-E369853 [TUS-26-B7]">
      <seq>gttttttttttttttttttttttttttgcttctaaacaactgatgttcttggatatctttgatgtagtacacaatttcattattgcaaaataaggatccgactcggtcttacaattctttatacacaactaaaccggaacatgtatgctagatagatattaaacaaagtccataaaagatattcatatgcctctaaaggatccaattggagctactaagaaacagctagttttccgcagtcgaagttagcaatttttagtgtaactgatatagtaactccacctaaaaaatgttgtcttaagaaactgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="75334" stop="25857"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26465" g_stop="26157" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="310" r_length="310" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E369853" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>309</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369853" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26465" e_stop="26157"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATA-GCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGAT</genome_strand>
        <mrna_strand>GTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTATACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATATGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E330288" ref_strand="+" ref_description="SGN-E330288 [cTOD-4-J5]">
      <seq>ttttgtatcatccggggaaggccaatgttgtggccgatgctttgagtaggaagactcatagcatggggagtcttgcatctcttagtgttgaggaaagaccattggctagagatgttcaattgttagctaacagtcttgtccgattacagatctcagaggagagtgatgggatgattgcttttattgaggctcgatcttctttagtcaagcagattcgtgcacaccagtttgatgacgaaaaattatgtctcattcgagacaaagtattgagaggggaagctaaggaggttgtccttgattctgatggtgtcttgaggatcggaggcaggatttgtgtgcccaagacaggcgatttgattagattgatccttgaggaggcccattgttctcgatattctatgcatccgggagaggcgaaaatgtatcatgatctgagtcagcattactggtggtgtgggatgaagagagatattacagactttgttttgaggtgtttgacttgccagttggtcaagtgtgagcaccagtggcctgggggtgtatctcaaaggatgcctattcttacttggacgtgggagtggattacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="38468" stop="37283"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="38168" g_stop="37583" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="588" r_length="588" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E330288" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E330288" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="38168" e_stop="37583"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTGTATCATCCAGGGAAGGCCAATGTTGTGGCCGATGCTTTGAGTAGGAAGACTCATAGCATGGGGAGTCTTGCATCTCTTAGTGTTGAGGAGATACCATTGGCTAGAGATGTTCAATTGTTAGCTAACAGTCTTGTCCGATTACAGATCTTAGAAGAGAGTGATAGGATGATTGCTTTTATTGAGGCTCGATCTTCTTTAGTCGAGCAGATTCGTG--CACCAGTTTGATGATGAAAAATTATGTCTCATTCGAGACAAAGTATTGAGAGGGGAAGCTAAAGAGGTTGTCCTTGATTCTGATGGTGTCTTGAGGATCGGAGGCAGGATTTGTGTGCCCAAGACAGGCAATTTGATTAGATTGATCCTTGAGGAGGCCCATTGTTCTCGATATTCTATCCATCCGGGTGCGGCGAAGATGTATCATGATCTGAGTCAGCATTACTGGTGGTGTGGGATGAAGAGAGATATTTCAGACTTTGTTTCGAGGTGTTTGACTTGCCAGCAGGTCAAGTGTGAGCACCAGCGGCCCAGGGGTGTATCTCAGAGGATGCCTATTCCTACTTGGAAGTGGGAGCGGATTACTA</genome_strand>
        <mrna_strand>TTTTGTATCATCCGGGGAAGGCCAATGTTGTGGCCGATGCTTTGAGTAGGAAGACTCATAGCATGGGGAGTCTTGCATCTCTTAGTGTTGAGGAAAGACCATTGGCTAGAGATGTTCAATTGTTAGCTAACAGTCTTGTCCGATTACAGATCTCAGAGGAGAGTGATGGGATGATTGCTTTTATTGAGGCTCGATCTTCTTTAGTCAAGCAGATTCGTGCACACCAGTTTGATGACGAAAAATTATGTCTCATTCGAGACAAAGTATTGAGAGGGGAAGCTAAGGAGGTTGTCCTTGATTCTGATGGTGTCTTGAGGATCGGAGGCAGGATTTGTGTGCCCAAGACAGGCGATTTGATTAGATTGATCCTTGAGGAGGCCCATTGTTCTCGATATTCTATGCATCCGGGAGAGGCGAAAATGTATCATGATCTGAGTCAGCATTACTGGTGGTGTGGGATGAAGAGAGATATTACAGACTTTGTTTTGAGGTGTTTGACTTGCCAGTTGGTCAAGTGTGAGCACCAGTGGCCTGGGGGTGTATCTCAAAGGATGCCTATTCTTACTTGGACGTGGGAGTGGATTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E352040" ref_strand="+" ref_description="SGN-E352040 [cTOS-13-B19]">
      <seq>ggtggtacctctaccccaactttgctgagctccaacaccactactagaaactctatcaccctacctgactgtactctgcaacgacctctaccctgtagagctagtggtctagtatggaatgaagaattaggtcgaggcccaccacgacccctttaagaagtacactgccgcattagatgatcgggatctccacaagtaaaacaaaatctctaacctgggaactgctgtgtggaccctgaaaacccacaataattgcctcgccctgaaggtcgctgctgtgaaccgtacgagccctgaaccaggacataagaacccctagatgtttggccaccctcaaatattgtcttagatgcatgaataggtccccgctgctgaaaagaaccactcactctctgtgatcccctacctccagatgaatcaccatgaaactgacttgatatacgggcccttatagggtccccaaactcctccctctcttcatcaattccaactctttggaggcgctcataatggactgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="39721" stop="40797"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40021" g_stop="40537" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="518" r_length="518" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E352040" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352040" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40021" e_stop="40537"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTGGTACCTCTACCCCCACTTTGCTGAGCTGCAACACCACTACTAGAAACTCTGTCACCTCTACCTGACTGAACTCTGCCACGACCTCTACCCTGTGGAGCTGGTGGTCTAGTCTGGAATGAAGAATTAGGTCGAGGACCACCACGACCCCTTTGAGAAGTACACTGCCTCATTAGATGATCGGGATCTCCACAAGTAAAACAAAATCTCTGACCTGGGAACTGCTGTGTGGACCCTGAAAACCCACTATAATTGCCTCGCCCTGTAGGTCGCTGCTGTGAACCATACGAGCCTTGAACTGGTTCATAAGAACCCCTAGATGTCTGGCCAGCCTCAAATGTCGGCATAGATGCATGAATAGGTCCTCGCTGCTGAAAAGAACCACTCACTCTCTGTGATCCCCTACCTCCAGATGAGGCACCCTGAAACTGACCTGATATACGAGCTCTTTTAGGGTCCCCAAACTCCT--CTCTCTCCATCAATTCCGCCTATTTGGCGGCGCTCACAATGGACTGG</genome_strand>
        <mrna_strand>GGTGGTACCTCTACCCCAACTTTGCTGAGCTCCAACACCACTACTAGAAACTCTATCACC-CTACCTGACTGTACTCTGCAACGACCTCTACCCTGTAGAGCTAGTGGTCTAGTATGGAATGAAGAATTAGGTCGAGGCCCACCACGACCCCTTTAAGAAGTACACTGCCGCATTAGATGATCGGGATCTCCACAAGTAAAACAAAATCTCTAACCTGGGAACTGCTGTGTGGACCCTGAAAACCCACAATAATTGCCTCGCCCTGAAGGTCGCTGCTGTGAACCGTACGAGCCCTGAACCAGGACATAAGAACCCCTAGATGTTTGGCCACCCTCAAATATTGTCTTAGATGCATGAATAGGTCCCCGCTGCTGAAAAGAACCACTCACTCTCTGTGATCCCCTACCTCCAGATGAATCACCATGAAACTGACTTGATATACGGGCCCTTATAGGGTCCCCAAACTCCTCCCTCTCTTCATCAATTCCAACTCTTTGGAGGCGCTCATAATGGACTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E279140" ref_strand="+" ref_description="SGN-E279140 [cLEL-4-H21]">
      <seq>gcacgagttgagagtctgagacaggatggtttatcggttacagagtgtaaggcgcgtttttgccagttgtctaggcatgcgttggccattattccaaatgaaacagagaggatccgtagatttgtgaggggattgactttctctatcaggtcagctgtgtttcggacatctaggggggacttctttccagtctattgtgagcgccgccaaagaggcagaattgatggagagagaggagtttggggaccctaaaagagctcgtatatcaggtcaatttcagggtgcctcatctggaggtaggggatcacagagagtgagtggttcttttcagcagcggggacctattcatgcatctatgccgacatttgagggtggccagacatctaagggttcttatggcccgggtcatggctcgtacggttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="41027" stop="39999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40727" g_stop="40299" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E279140" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E279140" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40727" e_stop="40299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTTGAGGTTTGAGAGTCTGAGACAGGATGGTTTATCGGTTACAGAGTATGAGGCGCGTTTTTTCCAGTTATCTAGGCATGCGTTGGCCATTATTACAAATGAGACAGAGAGGATCCGCATATTTGTGAGGGGATTGACTTTATCTATCAGGTCAGCTGTGTTTCGGACATCTAGGGAGGGGACTTCTTTCCAGTCCATTGTGAGCGCCGCCAAATAGGCGGAATTGATGGAGAGAGAGGAGTTTGGGGACCCTAAAAGAGCTCGTATATCAGGTCAGTTTCAGGGTGCCTCATCTGGAGGTAGGGGATCACAGAGAGTGAGTGGTTCTTTTCAGCAGCGAGGACCTATTCATGCATCTATGCCGACATTTGAGGCTGGCCAGACATCTAGGGGTTCTTATGAACCAGTTCAAGGCTCGTATGGTTCAC</genome_strand>
        <mrna_strand>GCACGAG-T-TGAGAGTCTGAGACAGGATGGTTTATCGGTTACAGAGTGTAAGGCGCGTTTTTGCCAGTTGTCTAGGCATGCGTTGGCCATTATTCCAAATGAAACAGAGAGGATCCGTAGATTTGTGAGGGGATTGACTTTCTCTATCAGGTCAGCTGTGTTTCGGACATCTA-GG-GGGGACTTCTTTCCAGTCTATTGTGAGCGCCGCCAAAGAGGCAGAATTGATGGAGAGAGAGGAGTTTGGGGACCCTAAAAGAGCTCGTATATCAGGTCAATTTCAGGGTGCCTCATCTGGAGGTAGGGGATCACAGAGAGTGAGTGGTTCTTTTCAGCAGCGGGGACCTATTCATGCATCTATGCCGACATTTGAGGGTGGCCAGACATCTAAGGGTTCTTATGGCCCGGGTCATGGCTCGTACGGTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E577887" ref_strand="+" ref_description="SGN-E577887 [LE08AH11]">
      <seq>ttgggtcggagcaccctctctagtacgagagtcatgtggtgtggtagtcgcaccaccaccctgataaaagccctctagaacacttaacaccctaaaaagtgtatcctgaagcaaaggtgtgactacaggatctggaggaacctggtcacctctgccatcaatttgaggttttgtagagacctctctagcacgacctctcactggtgctgctccacgtccacgacctctagctactatcgtactactagaacgacatctagctcgagacctacccctacccataactggggcctcaacaactgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="40846" stop="41748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41146" g_stop="41448" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="303" r_length="303" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E577887" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>303</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41146" e_stop="41448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGGTCTGAGCCCCCTCTCTAGTACGAGAGTCATGTGGTGTGGTAGTCGCACCACCACCCTGAGAAAATCCCTCTAGCACACTTAACACCCTCAATAGTGTATCTTGAAGCAAAGGTGTGACTACAGGATCTGAAGGAACCTGGTCCTCCCTACCATCAATCTGAGGTTCTGTAGAGACCTCTCTAGCACGACCTCTCACTGGTGCTGCTCCACGTCCACGACCTCTGGCTACTGTCGTACTACTAGCACGACCTCTAGCTCGAGATCTACCCCTACCCCTAGCTGGGGCCTCAACAACTGC</genome_strand>
        <mrna_strand>TTGGGTCGGAGCACCCTCTCTAGTACGAGAGTCATGTGGTGTGGTAGTCGCACCACCACCCTGATAAAAGCCCTCTAGAACACTTAACACCCTAAAAAGTGTATCCTGAAGCAAAGGTGTGACTACAGGATCTGGAGGAACCTGGTCACCTCTGCCATCAATTTGAGGTTTTGTAGAGACCTCTCTAGCACGACCTCTCACTGGTGCTGCTCCACGTCCACGACCTCTAGCTACTATCGTACTACTAGAACGACATCTAGCTCGAGACCTACCCCTACCCATAACTGGGGCCTCAACAACTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E542858" ref_strand="-" ref_description="SGN-E542858 [TUS-64-G1]">
      <seq>gaacagatttcacagaacagacacgttccttgctgaaaattgctataaaggaagtcaattttgattttcaaacactgaaaattttccttctcngtattatttttctctaaaaaaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgctgttctgaagtttgctgaagttaaagaagtttgagaaaaaaaaagactaactcaagtcaaacaaatgctggaatagtaagtgctgcaacaacatcggctgcacataatcattcagatgctatcttagcggcggctgagaaacctgcagagttttctggagtcgactttgagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcattaatgagaatgttcctgtttatcagatgaaactccggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagtggtctgcaagatgaacaacaatgccaaaacctcaaagaactcttggatgctttagaaaagaagtacaaaacagaagatgccggaatgaagaaattcattgtggtaaaatttttggactataagatgatagacaataagactgtcgtcacccaagttcaagaattgcaggtcataatccatgatctgtgctgaatgtataaatttatttaatgcctatgttagaaatattaagttttcccttaataaatttatttaattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44508" stop="76723"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44808" g_stop="45006" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="189" r_length="189" r_score="0.889"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45007" i_stop="45426" i_length="420">
            <donor d_prob="0.774" d_score="0.92"/>
            <acceptor a_prob="0.966" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="45427" g_stop="45994" g_length="568"/>
          <reference_exon_boundary r_type="cDNA" r_start="190" r_stop="739" r_length="550" r_score="0.912"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="45995" i_stop="46233" i_length="239">
            <donor d_prob="0.900" d_score="0.90"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="46234" g_stop="46251" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="740" r_stop="757" r_length="18" r_score="0.722"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E542858" ref_strand="-">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>785</cumulative_length_of_scored_exons>
        <coverage percentage="1.037" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542858" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="44808" e_stop="45006"/>
          <exon e_start="45427" e_stop="45994"/>
          <exon e_start="46234" e_stop="46251"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACAGATTTCACTGAACAGACACGTTCCTTGCTGAAAATGGCTATAAAATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATTTTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAGAAATTTAATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATTTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGAAGGTCATAATTCATGATCTCCTTGCTGAAGGTATAAATTTATTTAATGCCTATGTTAGAAATATTAAGTTTTCCCTTAATACTCACATAACCTTTAATGTAGGATTAATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAAGGAGATGACTGTTGAAGATCTCATAGTAAGGTTGAGAATCGAAGAGGATAATAAGGCTGCAGAAAAGAGGTCACGTGGTAATTCAGCAATATCTGGAGTAAATTTTGTTGAAGAAGATTCCACAAAATTAAAGAAAAGAAAGAA</genome_strand>
        <mrna_strand>GAACAGATTTCACAGAACAGACACGTTCCTTGCTGAAAATTGCTAT-AAAGGAAGTC-AA-TTTTGA-TTTTCAAACACTGAAAA--TTTTCCTTCTCNGTATT-ATTTTTCTCT---AAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTGAAGTTTGCTGAAGTTAAAGAAGTTTGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAGACTAACTCAAGTCAAACAAATGCTGGAATAGTAAGTGCTGCAACAACATCGGCTGCACATAATCATTCAGATGCTATCTTAGCGGCGGCTGAGAAACCTGCAGAGTTTTCTGGAGTCGACTTTGAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATTAATGAGAATGTTCCTGTT-TATCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGC-A-A-GA--TG----A-----ACAACAATGCCAAAACCTC-AAAGAACTCTTGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGTAAAATTTTTGGACTATAAGATGATAGACAATAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATCCATGATCT--GTGCTGAATGTATAAATTTATTTAATGCCTATGTTAGAAATATTAAGTTTTCCCTTAATAAATTT...............................................................................................................................................................................................................................................ATTTAATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E262710" ref_strand="+" ref_description="SGN-E262710 [cLEG-63-E14]">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44527" stop="45733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44826" g_stop="45433" g_length="608"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E262710" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262710" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44826" e_stop="45433"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACGTTCCTTGCTGAAAATGGCTATAAAATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAA</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAA-TTTTGATTTTTTAAACACTGAAAA-TTTTTCTTTCTCTGCATTTATTTTTCTCTC--AAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E369760" ref_strand="+" ref_description="SGN-E369760 [TUS-25-O3]">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatactta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44527" stop="45704"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44826" g_stop="45404" g_length="579"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="577" r_length="577" r_score="0.934"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E369760" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>579</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E369760" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44826" e_stop="45404"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACGTTCCTTGCTGAAAATGGCTATAAAATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTA</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAA-TTTTGATTTTTTAAACACTGAAAA-TTTTTCTTTCTCTGCATTTATTTTTCTCTC--AAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E255327" ref_strand="+" ref_description="SGN-E255327 [cLEG-30-E2]">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgatttttgaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaacttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44527" stop="45641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44826" g_stop="45341" g_length="516"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="514" r_length="514" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E255327" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>516</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E255327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44826" e_stop="45341"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACGTTCCTTGCTGAAAATGGCTATAAAATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTA</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAA-TTTTGATTTTTGAAACACTGAAAA-TTTTTCTTTCTCTGCATTTATTTTTCTCTC--AAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E261310" ref_strand="+" ref_description="SGN-E261310 [cLEG-68-F10]">
      <seq>ggacatgttccttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44527" stop="50856"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44826" g_stop="45056" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E261310" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>231</cumulative_length_of_scored_exons>
        <coverage percentage="1.018" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261310" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44826" e_stop="45056"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGACACGTTCCTTGCTGAAAATGGCTATAAAATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATT</genome_strand>
        <mrna_strand>GGACATGTTCCTTGCTGAAAATGGCTATAAAAGGAAGTCAAA-TTTTGATTTTTTAAACACTGAAAA-TTTTTCTTTCTCTGCATTTATTTTTCTCTC--AAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E262800" ref_strand="+" ref_description="SGN-E262800 [cLEG-63-P6]">
      <seq>cttgctgaaaatggctataaaaggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44536" stop="45535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44836" g_stop="45235" g_length="400"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="397" r_length="397" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E262800" ref_strand="+">
        <total_alignment_score>0.935</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262800" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44836" e_stop="45235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCTGAAAATGGCTATAAAATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAGAAATTTAATA</genome_strand>
        <mrna_strand>CTTGCTGAAAATGGCTATAAAAGGAAGTCAAA-TTTTGATTTTTTAAACACTGAAAA-TTTTTCTTTCTCTGCATTTATTTTTCTCTC--AAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E254845" ref_strand="+" ref_description="SGN-E254845 [cLEG-33-L11]">
      <seq>aggaagtcaaattttgattttttaaacactgaaaatttggctttcggtgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtaccagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagaataaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagaattgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44557" stop="45749"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44857" g_stop="45449" g_length="593"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="591" r_length="591" r_score="0.922"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E254845" ref_strand="+">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>593</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E254845" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44857" e_stop="45449"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTA-CAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTC</genome_strand>
        <mrna_strand>AGGAAGTCAAA-TTTTGATTTTTTAAACACTGAAAA-TTTGGCTTTCGGTGCATTTATTTTTCTCTC--AAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACCAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGAATAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGAATTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E273518" ref_strand="+" ref_description="SGN-E273518 [cLEN-6-E15]">
      <seq>ggaagtcaaattttgattttttaaacactgaaaatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44559" stop="45813"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44858" g_stop="45513" g_length="656"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="653" r_length="653" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E273518" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44858" e_stop="45513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGC</genome_strand>
        <mrna_strand>GGAAGTCAAA-TTTTGATTTTTTAAACACTGAAAA-TTTTTCTTTCTCTGCATTTATTTTTCTCTC--AAATAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E258205" ref_strand="+" ref_description="SGN-E258205 [cLEG-49-B23]">
      <seq>aatttttctttctctgcatttatttttctctcaaataaaatcaaagtgtcgatcgactgagtctgtgtgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctggttctgtttattaactttataaataaaaggtattataagagtaacaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44592" stop="45521"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44892" g_stop="45221" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="0.930"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E258205" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>330</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258205" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44892" e_stop="45221"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCT</genome_strand>
        <mrna_strand>AATTTTTCTTTCTCTGCATTTATTTTTCTCTCAAATAAAA--TCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGGTTCTGTTTATTAACTTTATAAATAAAAGGTATTATAAGAGTAACAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E263584" ref_strand="+" ref_description="SGN-E263584 [cLEG-60-L13]">
      <seq>tgacttgttgttgttcttaagttcgttgaagttaaagaagtttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44661" stop="45966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44961" g_stop="45666" g_length="706"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="707" r_length="707" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E263584" ref_strand="+">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>706</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263584" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44961" e_stop="45666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACG</genome_strand>
        <mrna_strand>TGACTTGTTGTTGTTCTTAAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E261066" ref_strand="+" ref_description="SGN-E261066 [cLEG-65-C11]">
      <seq>tttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcataaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagatttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagatttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44701" stop="46005"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45001" g_stop="45705" g_length="705"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="706" r_length="706" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E261066" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>705</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261066" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45001" e_stop="45705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTT</genome_strand>
        <mrna_strand>TTTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCATAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGATTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E276669" ref_strand="+" ref_description="SGN-E276669 [cLEN-14-A16]">
      <seq>ttgaggtaccgctatttctttaacaggtttaatccgttttatcttgagagaaattaatccataaccttgggtacagtgagggaattaaatttcttaaggacacatagtagtttctgtggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctgtttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44702" stop="45935"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45002" g_stop="45635" g_length="634"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="635" r_length="635" r_score="0.951"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E276669" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>634</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276669" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45002" e_stop="45635"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTG</genome_strand>
        <mrna_strand>TTGAGGTACCGCTATTTCTTTAACAGGTTTAATCCGTTTTATCTTGAGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGAATTAAATTTCTTAAGGACACATAGTAGTTTCTGTGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGTTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E253427" ref_strand="+" ref_description="SGN-E253427 [cLEG-24-L5]">
      <seq>tggactcggattaattcttgtattctatattattttctgcttcatcttatttctgtttctggttattaactttataaataaaagttattataagagtaacaatcttaagaaaatttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44818" stop="46027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45118" g_stop="45727" g_length="610"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="611" r_length="611" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E253427" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E253427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45118" e_stop="45727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGACTCGGATTAATTCTTCTATTTTAAATT-TTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAG-AAATTTA-ATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTTGTGTAAAAATTATATTTTGAGT</genome_strand>
        <mrna_strand>TGGACTCGGATTAATTCTTGTATTCTATATTATTTTCTGCTTCATCTTATTTCTGTTTCTGGTTATTAACTTTATAAATAAAAGTTATTATAAGAGTAACAATCTTAAGAAAATTTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E262550" ref_strand="+" ref_description="SGN-E262550 [cLEG-63-C22]">
      <seq>ttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctgggacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaactgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaattatattttgagtggtctgcaagatgatctgtancatgtgtacagcaatgcaaaaacctcaaaagaactctgggatgctttagaaaagaagtacaaacagaagatgccggaaatgagaaaatcattgtgggcaaatttctagacttttagatgatagacagtaagactgtcgtcacccaagtttcagaattgcaggttataatccatgatctccttgctgaaaggatgattgtgaatgatgcttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44930" stop="46259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45229" g_stop="45938" g_length="710"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="705" r_length="705" r_score="0.945"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45939" i_stop="46010" i_length="72">
            <donor d_prob="0.997" d_score="0.88"/>
            <acceptor a_prob="0.944" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46011" g_stop="46032" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="706" r_stop="727" r_length="22" r_score="0.864"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E262550" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="1.007" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E262550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45229" e_stop="45938"/>
          <exon e_start="46011" e_stop="46032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATTTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGAAGGTCATAATTCATGATCTCCTTGCTGAAGGTATAAATTTATTTAATGCCTATGTTAGAAATATTAAGTTTTCCCTTAATACTCACATAACCTTTAATGTAGGATTAATTGTGAATGATGCTTT</genome_strand>
        <mrna_strand>TTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTCAAACAAATGCTGGGACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAA-CTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGT-AAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTANCATGTGTACAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTAC-AAACAGAAGATGCCGGAAATGAGAAAATCATTGTGGGCAAATTTCTAGACTTTTAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTTCAGAATTGCAGGTTATAATCCATGATCTCCTTGCTGAAA........................................................................GGATGATTGTGAATGATGCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E258047" ref_strand="+" ref_description="SGN-E258047 [cLEG-48-K15]">
      <seq>ttatacagtttctgtgtttgaggtttctggagattaaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44930" stop="45973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45229" g_stop="45673" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="443" r_length="443" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E258047" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258047" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45229" e_stop="45673"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTG</genome_strand>
        <mrna_strand>TTATACAGTTTCTGTGTTTGAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E261540" ref_strand="+" ref_description="SGN-E261540 [cLEG-57-K8]">
      <seq>taaaacctttatggttttctactctacttgaatttttaaaatcattcgattaacgattaaaaaaacataaaaactttatcgttaaatcagaaacaggttgtgtaaagatttgctctttactgttagtattttaaatacttaatttatctgccaattgtgacagaaaaaaaagactaattcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagtggtctgcaagatgatctgtacaatgtgtacagcaatgcaaaaacctcaaaagaactctgggatgctttagaaaagaagtacaaaacagaagatgccggaatgaagaaattcattgtggcaaaatttctagactttaagatgatagacagtaagactgtcgtcacccaagttcaagaattgcaggttataatccatgatctccttgctgaaggattgattgtgaatgatgcttttcaagtggctgcaattattgaaaagttacctcctattgtggaaggactttaaaaactacttgaaacacaaacgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="44963" stop="46407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45263" g_stop="45938" g_length="676"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="674" r_length="674" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45939" i_stop="46010" i_length="72">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46011" g_stop="46107" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="675" r_stop="772" r_length="98" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E261540" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>773</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E261540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45263" e_stop="45938"/>
          <exon e_start="46011" e_stop="46107"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATTTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGAAGGTCATAATTCATGATCTCCTTGCTGAAGGTATAAATTTATTTAATGCCTATGTTAGAAATATTAAGTTTTCCCTTAATACTCACATAACCTTTAATGTAGGATTAATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCC-ATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAA</genome_strand>
        <mrna_strand>TAAAACCTTTATGGTTTTCTACTCTACTTGAATTTTTAAAA-TCATTCGATTAACGATTAAAAAAACATAAAAACTTTATCGTTAAATCAGAAACAGGTTGTGTAAAGATTTGCTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCAATTGTGACAGAAAAAAAA-GACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTACAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTAGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTTATAATCCATGATCTCCTTGCTGAAG........................................................................GATTGATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCTATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E251204" ref_strand="+" ref_description="SGN-E251204 [cLEG-10-L14]">
      <seq>tcaagtcaaacaaatgctggaacagtaagtgctgcaacaacaatggttgcacataatcgttcacatgctgccttagcaccggctgagaaacctgcaaagttttctggagtcgactttaagagatggcagcaaaagatgttcttctatctcactacgttgagtctgcagaagttcatcaatgagaatgttcctgttatgtcagatgaaacttcggctgatgaacgattcttggtaacagaagcatggacacactcagattttttgtgtaaaaattatattttgagtggtctgcaagatgatctgtacaatgtgtacagcaatgcaaaaacctcaaaagaactctgggatgctttagaaaagaagtacaaaacagaagatgccggaatgaagaaattcattgtggcaaaatttctagactttaagatgatagacagtaagactgtcgtcacccaagttcaagaattgcaggttataatccatgatctccttgctgaaggattgattgtgaatgatgcttttcaagtggctgcaattattgaaaagttacctctattgtggaaggactttaaaaactacttgaaacacaaacgcaaggagatgattgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45143" stop="46422"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45443" g_stop="45938" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45939" i_stop="46010" i_length="72">
            <donor d_prob="0.997" d_score="0.94"/>
            <acceptor a_prob="0.944" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46011" g_stop="46122" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="497" r_stop="608" r_length="112" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E251204" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>608</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45443" e_stop="45938"/>
          <exon e_start="46011" e_stop="46122"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATTTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGAAGGTCATAATTCATGATCTCCTTGCTGAAGGTATAAATTTATTTAATGCCTATGTTAGAAATATTAAGTTTTCCCTTAATACTCACATAACCTTTAATGTAGGATTAATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAAGGAGATGACTGTTGA</genome_strand>
        <mrna_strand>TCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAATGGTTGCACATAATCGTTCACATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTTCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACACTCAGATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATCTGTACAATGTGTACAGCAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTAGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGCAGGTTATAATCCATGATCTCCTTGCTGAAG........................................................................GATTGATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCTATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAAGGAGATGATTGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E419244" ref_strand="-" ref_description="SGN-E419244 [STM-29-A12]">
      <seq>tcaagagatggcagcaaaagatgtctttctatctgactacattgagtctgcagaggttcattaatgagaacgttcctgttatgtcggatgaaactccgcctgaagaacgattcttggtaacagaagcatggacacattctgattttttgtgtaaaaattatattctgagtggcctgcaggatgatctatacaatgtgtacagtaatgtgaaaacctcaaaagaactctgggatgctttagaaaagaagtacaaaacagaggatgccggaatgaagaaatttattgtggcaaagtttctggactataagatgatagacagtaagaccgtcgtcacccaagttcaagaattgcaggtcataatccatgatctccttgctgaaggattggttgtgaatgatgcttttcaagtggctgccattatagagaagttacctccattgtggaaggacttcaaaaactacttgaaacataaacgcaaggagatgactgttgaagatctcatggtaaggctgagaatcgaagaggataacaaggccgcagaaaagaggtcgcgtggtaattcagcaatatcaggagtaaatattgtgaagaagatcccacaaaatcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45260" stop="46548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45558" g_stop="45938" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45939" i_stop="46010" i_length="72">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.944" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46011" g_stop="46246" g_length="236"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="616" r_length="235" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E419244" ref_strand="-">
        <total_alignment_score>0.922</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E419244" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="45558" e_stop="45938"/>
          <exon e_start="46011" e_stop="46246"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATTTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGAAGGTCATAATTCATGATCTCCTTGCTGAAGGTATAAATTTATTTAATGCCTATGTTAGAAATATTAAGTTTTCCCTTAATACTCACATAACCTTTAATGTAGGATTAATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAAGGAGATGACTGTTGAAGATCTCATAGTAAGGTTGAGAATCGAAGAGGATAATAAGGCTGCAGAAAAGAGGTCACGTGGTAATTCAGCAATATCTGGAGTAAATTTTGTTGAAGAAGATTCCACAAAATTAAAGAAAAGA</genome_strand>
        <mrna_strand>TCAAGAGATGGCAGCAAAAGATGTCTTTCTATCTGACTACATTGAGTCTGCAGAGGTTCATTAATGAGAACGTTCCTGTTATGTCGGATGAAACTCCGCCTGAAGAACGATTCTTGGTAACAGAAGCATGGACACATTCTGATTTTTTGTGTAAAAATTATATTCTGAGTGGCCTGCAGGATGATCTATACAATGTGTACAGTAATGTGAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAGGATGCCGGAATGAAGAAATTTATTGTGGCAAAGTTTCTGGACTATAAGATGATAGACAGTAAGACCGTCGTCACCCAAGTTCAAGAATTGCAGGTCATAATCCATGATCTCCTTGCTGAAG........................................................................GATTGGTTGTGAATGATGCTTTTCAAGTGGCTGCCATTATAGAGAAGTTACCTCCATTGTGGAAGGACTTCAAAAACTACTTGAAACATAAACGCAAGGAGATGACTGTTGAAGATCTCATGGTAAGGCTGAGAATCGAAGAGGATAACAAGGCCGCAGAAAAGAGGTCGCGTGGTAATTCAGCAATATCAGGAGTAAATATTG-TGAAGAAGATCCCACAAAATCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E369759" ref_strand="+" ref_description="SGN-E369759 [TUS-25-O3]">
      <seq>ttttttttttaagaagaagcaaaatctttattcatatcaactgcaattacattgagtttgaaaaggccatcactaaggtagtcttttcctacatacatatcatttttgcttactactactttatcagaaacaaatacacatttaaatccattcttggtcagaattggaattgaaactaaattatttctcaattctggaacatatgagaccatattcaaagtcactaccttgcctgatgtcatctttaataggactttgccagttccttccacctttgcaacagcggagtttgccataaataatttttcatctgtaagtgctagagtatatgatgaaaataattctttgttggcacaaacatggcatgaggcaccagaatctatccaccattctcttggatttccaaccaagttacattctgaaagcattgcacagagatcgtccatttctcctttggattcagccaagtttgcttgatccttctttttcttgtccttcttaggaccccggcattcattagccctatgaccatgtttaccacaattaaagcagtttccattgaatttcttcttaggaggattgcgttttggaccagatgctttctttcttttcttgaattttgtggaatcttcttcaacaaaatttactccagatattgctgaattaccacgtgacctcttttctgcagccttattatcctcttcgattctcaacctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="47142" stop="45834"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46842" g_stop="46134" g_length="709"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="718" r_length="709" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E369759" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>709</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E369759" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46842" e_stop="46134"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAGAAGAAGCAAAATCTTTATTCATATCAACTGCTATTACATTGAGTTTGAAAAGGTCATCACTAAAGTAGCCTTTTCCTACATACATATCATTTTTGCTTACTACTACTTTATCAGAAACAAATACACATTTAAATCCATTCTTGGTCAGAACTGGAATTGAAACTAAATTTTTTCTACATTCTGGAACATATGAGACCCTATTCAAAGTCACCACCTTGCCTGATGTCATCTTTAATAGGACTTTGCCAGTTCCTTCCACCTTTGCAACAGCGGAGTTTGCCATAAACAATTTTTCATCTGTAAGTGCTAGAGTATATGATGAAAATAATTCTTTGTTGGCACAAACATGGCATGAGGCACCAGAATCTATCCACCATTCTCTTGGATTTCCAACCAAGTTACATTCTGAAAGCATTGCACAGAGATCGTCCATTTCTCCTTTGGATTCAGCCAAGTTTGTTTGATCCTTCTTTTTCTTGTTCTTCTTAGGACCCCGGCATTTATTAGCCCTATGACCATGTTTACCACAATTAAAGCAGTTTCCATTGAATTTCTTCTTAGGAGGATTGCTTTTTGGACCAGATGCTTTCTTTCTTTTCTTTAATTTTGTGGAATCTTCTTCAACAAAATTTACTCCAGATATTGCTGAATTACCACGTGACCTCTTTTCTGCAGCCTTATTATCCTCTTCGATTCTCAACCTTA</genome_strand>
        <mrna_strand>TAAGAAGAAGCAAAATCTTTATTCATATCAACTGCAATTACATTGAGTTTGAAAAGGCCATCACTAAGGTAGTCTTTTCCTACATACATATCATTTTTGCTTACTACTACTTTATCAGAAACAAATACACATTTAAATCCATTCTTGGTCAGAATTGGAATTGAAACTAAATTATTTCTCAATTCTGGAACATATGAGACCATATTCAAAGTCACTACCTTGCCTGATGTCATCTTTAATAGGACTTTGCCAGTTCCTTCCACCTTTGCAACAGCGGAGTTTGCCATAAATAATTTTTCATCTGTAAGTGCTAGAGTATATGATGAAAATAATTCTTTGTTGGCACAAACATGGCATGAGGCACCAGAATCTATCCACCATTCTCTTGGATTTCCAACCAAGTTACATTCTGAAAGCATTGCACAGAGATCGTCCATTTCTCCTTTGGATTCAGCCAAGTTTGCTTGATCCTTCTTTTTCTTGTCCTTCTTAGGACCCCGGCATTCATTAGCCCTATGACCATGTTTACCACAATTAAAGCAGTTTCCATTGAATTTCTTCTTAGGAGGATTGCGTTTTGGACCAGATGCTTTCTTTCTTTTCTTGAATTTTGTGGAATCTTCTTCAACAAAATTTACTCCAGATATTGCTGAATTACCACGTGACCTCTTTTCTGCAGCCTTATTATCCTCTTCGATTCTCAACCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E395006" ref_strand="-" ref_description="SGN-E395006 [TUS-34-O4]">
      <seq>aagaaattcaatggaaactgctttaattgtggtaaacatggtcataggggtaatgaatgccggggtcctaagaaggacaagaaaaagaaggatcaagcaaacttggctgaatccaaaggagaaatggacgatctctgtgcaatgctttcagaatgtaacttggttggaaatccaagagaatggtggatagattctggtgcctcatgccatgtttgtgccaacaaagaattattttcatcatatactctagcacttacagatgaaaaattatttatggcaaactccgctgttgcaaaggtggaaggaactggcaaagtcctattaaagatgacatcaggcaaggtagtgactttgaatatggtctcatatgttccagaattgagaaataatttagtttcaattccaattctgaccaagaatggatttaaatgtgtatttgtttttgataaagtagtagtaagcaaaaatgatatgtatgtaggaaaagactaccttagtgatggccttttcaaactcaatgtaattgcagttgatatgaataaagattttgcttctttttaaaaaaaaaaaaaaaaaaaaactcga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="45983" stop="75334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46283" g_stop="46845" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="563" r_length="563" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46846" i_stop="47148" i_length="303">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.947" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47149" g_stop="47170" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="585" r_length="22" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E395006" ref_strand="-">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395006" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46283" e_stop="46845"/>
          <exon e_start="47149" e_stop="47170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAAATTCAATGGAAACTGCTTTAATTGTGGTAAACATGGTCATAGGGCTAATAAATGCCGGGGTCCTAAGAAGAACAAGAAAAAGAAGGATCAAACAAACTTGGCTGAATCCAAAGGAGAAATGGACGATCTCTGTGCAATGCTTTCAGAATGTAACTTGGTTGGAAATCCAAGAGAATGGTGGATAGATTCTGGTGCCTCATGCCATGTTTGTGCCAACAAAGAATTATTTTCATCATATACTCTAGCACTTACAGATGAAAAATTGTTTATGGCAAACTCCGCTGTTGCAAAGGTGGAAGGAACTGGCAAAGTCCTATTAAAGATGACATCAGGCAAGGTGGTGACTTTGAATAGGGTCTCATATGTTCCAGAATGTAGAAAAAATTTAGTTTCAATTCCAGTTCTGACCAAGAATGGATTTAAATGTGTATTTGTTTCTGATAAAGTAGTAGTAAGCAAAAATGATATGTATGTAGGAAAAGGCTACTTTAGTGATGACCTTTTCAAACTCAATGTAATAGCAGTTGATATGAATAAAGATTTTGCTTCTTCTTACTAGCTTGAGTCTAAATGTTTATGGCATGAACATTTGGGACACGTTAATAACAAAACCTTGCGAAAACTGATTAACTTAAATATTTTGCCAAAATTTGAGTGCAATAAATCAAAATGTCAAATTTGTGTTGAATCTAAGTATGCTAAGCATTCTTATAAATCTGTTGAAAGGAATTCAAATCCTTTAGAATTGATTCACACTGATATTTGTGACATGAAGTCAACACCATCACGTGGTGGGAAAAAGTATTTCATAACTTTTATTGACGATTGCACTAGATATTGTTATGTCTATTTGCTAAATAGTAAGGATGAAACAATAGATGCA</genome_strand>
        <mrna_strand>AAGAAATTCAATGGAAACTGCTTTAATTGTGGTAAACATGGTCATAGGGGTAATGAATGCCGGGGTCCTAAGAAGGACAAGAAAAAGAAGGATCAAGCAAACTTGGCTGAATCCAAAGGAGAAATGGACGATCTCTGTGCAATGCTTTCAGAATGTAACTTGGTTGGAAATCCAAGAGAATGGTGGATAGATTCTGGTGCCTCATGCCATGTTTGTGCCAACAAAGAATTATTTTCATCATATACTCTAGCACTTACAGATGAAAAATTATTTATGGCAAACTCCGCTGTTGCAAAGGTGGAAGGAACTGGCAAAGTCCTATTAAAGATGACATCAGGCAAGGTAGTGACTTTGAATATGGTCTCATATGTTCCAGAATTGAGAAATAATTTAGTTTCAATTCCAATTCTGACCAAGAATGGATTTAAATGTGTATTTGTTTTTGATAAAGTAGTAGTAAGCAAAAATGATATGTATGTAGGAAAAGACTACCTTAGTGATGGCCTTTTCAAACTCAATGTAATTGCAGTTGATATGAATAAAGATTTTGCTTCTTTTTAAAA...............................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAACTCGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E250407" ref_strand="-" ref_description="SGN-E250407 [cLEG-6-H3]">
      <seq>aattgtggtaaacatggtcatagggctaatgaaagccggggtcttaagaaggacaagataaagaaggatcaagcaaacttgggtgaatccaaaggagaaatggacgatctctgtgcaatgctttcagaatgtaacttggttggaaatccaagagaatggtggatagattctggtgcctcatgccatgtttgtgccaacaaagaattattttcatcatatactctagcagttacagatgagaaattatttatggccaactccgctgttgcaaaggtgtaaggaactggcaaagtcctattaaagatgacatcaggcaaggtagtgactttgaatatggtctcatatgttccagaattgagaaataatttagtttcaattccaattctgaccaagaatggatttaaatgtgtatttgtttctgataaagtagtagtaagcaaaaatgatatgtatgtaggaaaagactaccttagtgatggccttttcaaactcaatgtaattgcagttcatatgaataaagattttgcttcttattaaaaaaaaaaaaaaaaaaagactcgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="46007" stop="75335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46307" g_stop="46845" g_length="539"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="538" r_length="538" r_score="0.952"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46846" i_stop="47148" i_length="303">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.947" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47149" g_stop="47172" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="562" r_length="24" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E250407" ref_strand="-">
        <total_alignment_score>0.952</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E250407" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46307" e_stop="46845"/>
          <exon e_start="47149" e_stop="47172"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGTGGTAAACATGGTCATAGGGCTAATAAATGCCGGGGTCCTAAGAAGAACAAGAAAAAGAAGGATCAAACAAACTTGGCTGAATCCAAAGGAGAAATGGACGATCTCTGTGCAATGCTTTCAGAATGTAACTTGGTTGGAAATCCAAGAGAATGGTGGATAGATTCTGGTGCCTCATGCCATGTTTGTGCCAACAAAGAATTATTTTCATCATATACTCTAGCACTTACAGATGAAAAATTGTTTATGGCAAACTCCGCTGTTGCAAAGGTGGAAGGAACTGGCAAAGTCCTATTAAAGATGACATCAGGCAAGGTGGTGACTTTGAATAGGGTCTCATATGTTCCAGAATGTAGAAAAAATTTAGTTTCAATTCCAGTTCTGACCAAGAATGGATTTAAATGTGTATTTGTTTCTGATAAAGTAGTAGTAAGCAAAAATGATATGTATGTAGGAAAAGGCTACTTTAGTGATGACCTTTTCAAACTCAATGTAATAGCAGTTGATATGAATAAAGATTTTGCTTCTTCTTACTAGCTTGAGTCTAAATGTTTATGGCATGAACATTTGGGACACGTTAATAACAAAACCTTGCGAAAACTGATTAACTTAAATATTTTGCCAAAATTTGAGTGCAATAAATCAAAATGTCAAATTTGTGTTGAATCTAAGTATGCTAAGCATTCTTATAAATCTGTTGAAAGGAATTCAAATCCTTTAGAATTGATTCACACTGATATTTGTGACATGAAGTCAACACCATCACGTGGTGGGAAAAAGTATTTCATAACTTTTATTGACGATTGCACTAGATATTGTTATGTCTATTTGCTAAATAGTAAGGATGAAACAATAGATGCATT</genome_strand>
        <mrna_strand>AATTGTGGTAAACATGGTCATAGGGCTAATGAAAGCCGGGGTCTTAAGAAGGACAAGATAAAGAAGGATCAAGCAAACTTGGGTGAATCCAAAGGAGAAATGGACGATCTCTGTGCAATGCTTTCAGAATGTAACTTGGTTGGAAATCCAAGAGAATGGTGGATAGATTCTGGTGCCTCATGCCATGTTTGTGCCAACAAAGAATTATTTTCATCATATACTCTAGCAGTTACAGATGAGAAATTATTTATGGCCAACTCCGCTGTTGCAAAGGTGTAAGGAACTGGCAAAGTCCTATTAAAGATGACATCAGGCAAGGTAGTGACTTTGAATATGGTCTCATATGTTCCAGAATTGAGAAATAATTTAGTTTCAATTCCAATTCTGACCAAGAATGGATTTAAATGTGTATTTGTTTCTGATAAAGTAGTAGTAAGCAAAAATGATATGTATGTAGGAAAAGACTACCTTAGTGATGGCCTTTTCAAACTCAATGTAATTGCAGTTCATATGAATAAAGATTTTGCTTCTTATTA-AA...............................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAGACTCGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E375520" ref_strand="-" ref_description="SGN-E375520 [TUS-34-B10]">
      <seq>atgccggggtcctaagaaggacaagaaaaagaaggatcaagcaaacttggctgaatccaaaggagaaatggacgatctctgtgcaatgctttcagaatgtaacttggttggaaatccaagagaatggtggatagattttggtgcctcatgccatgtttgtgccaacaaagaattattttcatcatatactttagcacttacagatgaaaaattatttatggcaaactccgctgttgcaaaggtggaaggaactggcaaagtcctattaaagatgacatcaggcaaggtagtgactttgaatatggtttcatatgttccagaattgagaaataatttagtttcaattccaattttgaccaagaatggatttaaatgtgtatttgtttttgataaagtagtagtaagcaaaaatgatatgtatgtaggaaaagactaccttagtgatggccttttcaaactcaatgtaattgcagttgatatgaataaagattttgcttttttttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="46039" stop="75334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46339" g_stop="46845" g_length="507"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="507" r_length="507" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46846" i_stop="47148" i_length="303">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.947" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47149" g_stop="47165" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="508" r_stop="524" r_length="17" r_score="0.529"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E375520" ref_strand="-">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375520" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="46339" e_stop="46845"/>
          <exon e_start="47149" e_stop="47165"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGCCGGGGTCCTAAGAAGAACAAGAAAAAGAAGGATCAAACAAACTTGGCTGAATCCAAAGGAGAAATGGACGATCTCTGTGCAATGCTTTCAGAATGTAACTTGGTTGGAAATCCAAGAGAATGGTGGATAGATTCTGGTGCCTCATGCCATGTTTGTGCCAACAAAGAATTATTTTCATCATATACTCTAGCACTTACAGATGAAAAATTGTTTATGGCAAACTCCGCTGTTGCAAAGGTGGAAGGAACTGGCAAAGTCCTATTAAAGATGACATCAGGCAAGGTGGTGACTTTGAATAGGGTCTCATATGTTCCAGAATGTAGAAAAAATTTAGTTTCAATTCCAGTTCTGACCAAGAATGGATTTAAATGTGTATTTGTTTCTGATAAAGTAGTAGTAAGCAAAAATGATATGTATGTAGGAAAAGGCTACTTTAGTGATGACCTTTTCAAACTCAATGTAATAGCAGTTGATATGAATAAAGATTTTGCTTCTTCTTACTAGCTTGAGTCTAAATGTTTATGGCATGAACATTTGGGACACGTTAATAACAAAACCTTGCGAAAACTGATTAACTTAAATATTTTGCCAAAATTTGAGTGCAATAAATCAAAATGTCAAATTTGTGTTGAATCTAAGTATGCTAAGCATTCTTATAAATCTGTTGAAAGGAATTCAAATCCTTTAGAATTGATTCACACTGATATTTGTGACATGAAGTCAACACCATCACGTGGTGGGAAAAAGTATTTCATAACTTTTATTGACGATTGCACTAGATATTGTTATGTCTATTTGCTAAATAGTAAGGATGAAACAATAG</genome_strand>
        <mrna_strand>ATGCCGGGGTCCTAAGAAGGACAAGAAAAAGAAGGATCAAGCAAACTTGGCTGAATCCAAAGGAGAAATGGACGATCTCTGTGCAATGCTTTCAGAATGTAACTTGGTTGGAAATCCAAGAGAATGGTGGATAGATTTTGGTGCCTCATGCCATGTTTGTGCCAACAAAGAATTATTTTCATCATATACTTTAGCACTTACAGATGAAAAATTATTTATGGCAAACTCCGCTGTTGCAAAGGTGGAAGGAACTGGCAAAGTCCTATTAAAGATGACATCAGGCAAGGTAGTGACTTTGAATATGGTTTCATATGTTCCAGAATTGAGAAATAATTTAGTTTCAATTCCAATTTTGACCAAGAATGGATTTAAATGTGTATTTGTTTTTGATAAAGTAGTAGTAAGCAAAAATGATATGTATGTAGGAAAAGACTACCTTAGTGATGGCCTTTTCAAACTCAATGTAATTGCAGTTGATATGAATAAAGATTTTGCTTTTTTTTAAAA...............................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E548702" ref_strand="+" ref_description="SGN-E548702 [TUS-63-K5]">
      <seq>gtactttcacacagagctttttccttgtaccaaaattggaaaatctcaaattgggtgccaatgatcttctcaaaggagttttaccaaagatccacccgagcaacactactctattggagttggatatttctaacacaggaatctctggtgagctgactgattcaattggcaccttcagttccttgaatatcttgaacctcaaaggatgtcgattctctggttccattcctgattccattggcaatcttacacaaattaggtatttggatttcagttataatcatttcaccggccatattccttccacaatctctcaattgaagcacctcacatatctaagtctttcatccaactccttttcaggtgaacttcccgatattttttctaacctccaagagttacgttatttatatctttctaacaacagcttcatcggttcgtttccttctaaaattgtaagcttgacacatcttgaatgcttagacttgtcctacaacttaatgaatgggaccataccatcttcggtgtttagcctccctttgttaggtctgttgtggctcaataataatcgatttagtggactacccgatgagctcaaaacaaacccaacattggtacgcctgtttttaagccataatcaactcagttgttcttttcctcaatcactttcgaatctcacaaactttctatccttgaccttttcatcgatagcatcactgtcgatgagggaaatcaaatcacttttccctaactaaaagttttgatggtatcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54519" stop="55892"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54819" g_stop="55592" g_length="774"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="773" r_length="773" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E548702" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>774</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548702" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54819" e_stop="55592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACTTTCACACAGAGCTTTTTCCTTGTACCAAAATTGGAAAATCTCAAATTGGGTGCCAATGATCTTCTCAAAGGAGTTTTACCAAAGATCCACCCGAGCAACACTACTCTATTGGAGTTGGATATTTCTAACACAGGAATCTCTGGTGAGCTGACTGATTCAATTGGCACCTTCAGTTCCTTGAATATCTTGAACCTCAAAGGATGTCGATTCTCTGGTTCCATTCCTGATTCCATTGGCAATCTTACACAAATTAGGTATTTGGATTTCAGTTATAATCATTTCACCGGCCATATTCCTTCCACAATCTCTCAATTGAAGCACCTCACATATCTAAGTCTTTCATCCAACTCCTTTTCAGGTGAACTTCCCGATATTTTTTCTAACCTCCAAGAGTTACGTTATTTATATCTTTCTAACAACAGCTTCATCGGTTCGTTTCCTTCTAAAATTGTAAGCTTGACACATCTTGAATGCTTAGACTTGTCCTACAACTTAATGAATGGGACCATACCATCTTCGGTGTTTAGCCTCCCTTTGTTAGGTCTGTTGTGGCTCAATAATAATCGATTTAGTGGACTACCCGATGAGCTCAAAACAAACCCAACATTGGTACGCCTGTTTTTAAGCCATAATCAACTCAGTTGTTCTTTTCCTCAATCACTTTCGAATCTCACAAACCTTTCTATCCTTGACC-TTTCATCGAATAGCATCACTGTCGATGAGGGAAATCAAATCACTTTCCCTAACCTAAAAGTTTTGATGTTATCAT</genome_strand>
        <mrna_strand>GTACTTTCACACAGAGCTTTTTCCTTGTACCAAAATTGGAAAATCTCAAATTGGGTGCCAATGATCTTCTCAAAGGAGTTTTACCAAAGATCCACCCGAGCAACACTACTCTATTGGAGTTGGATATTTCTAACACAGGAATCTCTGGTGAGCTGACTGATTCAATTGGCACCTTCAGTTCCTTGAATATCTTGAACCTCAAAGGATGTCGATTCTCTGGTTCCATTCCTGATTCCATTGGCAATCTTACACAAATTAGGTATTTGGATTTCAGTTATAATCATTTCACCGGCCATATTCCTTCCACAATCTCTCAATTGAAGCACCTCACATATCTAAGTCTTTCATCCAACTCCTTTTCAGGTGAACTTCCCGATATTTTTTCTAACCTCCAAGAGTTACGTTATTTATATCTTTCTAACAACAGCTTCATCGGTTCGTTTCCTTCTAAAATTGTAAGCTTGACACATCTTGAATGCTTAGACTTGTCCTACAACTTAATGAATGGGACCATACCATCTTCGGTGTTTAGCCTCCCTTTGTTAGGTCTGTTGTGGCTCAATAATAATCGATTTAGTGGACTACCCGATGAGCTCAAAACAAACCCAACATTGGTACGCCTGTTTTTAAGCCATAATCAACTCAGTTGTTCTTTTCCTCAATCACTTTCGAATCTCACAAA-CTTTCTATCCTTGACCTTTTCATCG-ATAGCATCACTGTCGATGAGGGAAATCAAATCACTTTTCCCTAACTAAAAGTTTTGATGGTATCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E542373" ref_strand="+" ref_description="SGN-E542373 [TUS-63-K9]">
      <seq>gtactttcacacagagctttttccttgtaccaaaattggaaaatctcaaattgggtgccaatgatcttctcaaaggagttttaccaaagatccacccgagcaacactactctattggagttggatatttctaacacaggaatctctggtgagctgactgattcaattggcaccttcagttccttgaatatcttgaacctcaaaggatgtcgattctctggttccattcctgattccattggcaatcttacacaaattaggtatttggatttcagttataatcatttcaccggccatattccttccacaatctctcaattgaagcacctcacatatctaagtctttcatccaactccttttcaggtgaacttcccgatattttttctaacctccaagagttacgttatttatatctttctaacaacagcttcatcggttcgtttccttctaaaattgtaagcttgacacatcttgaatgcttagacttgtcctacaacttaatgaatgggaccataccatcttcggtgtttagcctccctttgttaggtctgttgtggctcaataataatcgatttagtggactacccgatgagctcaaaacaaaccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54519" stop="55725"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54819" g_stop="55425" g_length="607"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E542373" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542373" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54819" e_stop="55425"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTACTTTCACACAGAGCTTTTTCCTTGTACCAAAATTGGAAAATCTCAAATTGGGTGCCAATGATCTTCTCAAAGGAGTTTTACCAAAGATCCACCCGAGCAACACTACTCTATTGGAGTTGGATATTTCTAACACAGGAATCTCTGGTGAGCTGACTGATTCAATTGGCACCTTCAGTTCCTTGAATATCTTGAACCTCAAAGGATGTCGATTCTCTGGTTCCATTCCTGATTCCATTGGCAATCTTACACAAATTAGGTATTTGGATTTCAGTTATAATCATTTCACCGGCCATATTCCTTCCACAATCTCTCAATTGAAGCACCTCACATATCTAAGTCTTTCATCCAACTCCTTTTCAGGTGAACTTCCCGATATTTTTTCTAACCTCCAAGAGTTACGTTATTTATATCTTTCTAACAACAGCTTCATCGGTTCGTTTCCTTCTAAAATTGTAAGCTTGACACATCTTGAATGCTTAGACTTGTCCTACAACTTAATGAATGGGACCATACCATCTTCGGTGTTTAGCCTCCCTTTGTTAGGTCTGTTGTGGCTCAATAATAATCGATTTAGTGGACTACCCGATGAGCTCAAAACAAACCC</genome_strand>
        <mrna_strand>GTACTTTCACACAGAGCTTTTTCCTTGTACCAAAATTGGAAAATCTCAAATTGGGTGCCAATGATCTTCTCAAAGGAGTTTTACCAAAGATCCACCCGAGCAACACTACTCTATTGGAGTTGGATATTTCTAACACAGGAATCTCTGGTGAGCTGACTGATTCAATTGGCACCTTCAGTTCCTTGAATATCTTGAACCTCAAAGGATGTCGATTCTCTGGTTCCATTCCTGATTCCATTGGCAATCTTACACAAATTAGGTATTTGGATTTCAGTTATAATCATTTCACCGGCCATATTCCTTCCACAATCTCTCAATTGAAGCACCTCACATATCTAAGTCTTTCATCCAACTCCTTTTCAGGTGAACTTCCCGATATTTTTTCTAACCTCCAAGAGTTACGTTATTTATATCTTTCTAACAACAGCTTCATCGGTTCGTTTCCTTCTAAAATTGTAAGCTTGACACATCTTGAATGCTTAGACTTGTCCTACAACTTAATGAATGGGACCATACCATCTTCGGTGTTTAGCCTCCCTTTGTTAGGTCTGTTGTGGCTCAATAATAATCGATTTAGTGGACTACCCGATGAGCTCAAAACAAACCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E298268" ref_strand="+" ref_description="SGN-E298268 [cLEW-18-M6]">
      <seq>tactttcacacatagctttttccttgtaccaaaattggaaaatctcaaattgggggccaatgatcttctcaaaggagttttaccaaagatccacccgagcaacactactctattggagttggatatttctaacacaagaatctctggtgagctgactgattcaattggcaccttcagttccttgaatatcttgaacctcaaaggatgtcgattctctggttccattcctgattccattggcaatcttacacaaattaggtatttggatttcagttataatcatttcaccggccatattccttccacaatctctcaattgaagcacctcacatatctaagtctttcatccaactccttttcaggtgaacttcccgatattttttctaacctccaagagttacgttatttatatctttctaacaacagcttcatcggttcgtttccttctaaaattgtaagcttgacacatcttgaatgcttagacttgtcctacaacttaatgaatgggaccataccatcttcggtgtttagcctccctttgttaggtctgttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="54520" stop="55673"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54820" g_stop="55373" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E298268" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298268" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54820" e_stop="55373"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTTTCACACAGAGCTTTTTCCTTGTACCAAAATTGGAAAATCTCAAATTGGGTGCCAATGATCTTCTCAAAGGAGTTTTACCAAAGATCCACCCGAGCAACACTACTCTATTGGAGTTGGATATTTCTAACACAGGAATCTCTGGTGAGCTGACTGATTCAATTGGCACCTTCAGTTCCTTGAATATCTTGAACCTCAAAGGATGTCGATTCTCTGGTTCCATTCCTGATTCCATTGGCAATCTTACACAAATTAGGTATTTGGATTTCAGTTATAATCATTTCACCGGCCATATTCCTTCCACAATCTCTCAATTGAAGCACCTCACATATCTAAGTCTTTCATCCAACTCCTTTTCAGGTGAACTTCCCGATATTTTTTCTAACCTCCAAGAGTTACGTTATTTATATCTTTCTAACAACAGCTTCATCGGTTCGTTTCCTTCTAAAATTGTAAGCTTGACACATCTTGAATGCTTAGACTTGTCCTACAACTTAATGAATGGGACCATACCATCTTCGGTGTTTAGCCTCCCTTTGTTAGGTCTGTTGT</genome_strand>
        <mrna_strand>TACTTTCACACATAGCTTTTTCCTTGTACCAAAATTGGAAAATCTCAAATTGGGGGCCAATGATCTTCTCAAAGGAGTTTTACCAAAGATCCACCCGAGCAACACTACTCTATTGGAGTTGGATATTTCTAACACAAGAATCTCTGGTGAGCTGACTGATTCAATTGGCACCTTCAGTTCCTTGAATATCTTGAACCTCAAAGGATGTCGATTCTCTGGTTCCATTCCTGATTCCATTGGCAATCTTACACAAATTAGGTATTTGGATTTCAGTTATAATCATTTCACCGGCCATATTCCTTCCACAATCTCTCAATTGAAGCACCTCACATATCTAAGTCTTTCATCCAACTCCTTTTCAGGTGAACTTCCCGATATTTTTTCTAACCTCCAAGAGTTACGTTATTTATATCTTTCTAACAACAGCTTCATCGGTTCGTTTCCTTCTAAAATTGTAAGCTTGACACATCTTGAATGCTTAGACTTGTCCTACAACTTAATGAATGGGACCATACCATCTTCGGTGTTTAGCCTCCCTTTGTTAGGTCTGTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E607222" ref_strand="+" ref_description="SGN-E607222 [23183]">
      <seq>tcttgacaaatgtaaagaaacttcaggtcttggatatttctaacaataagattcgtggtcaaatcccaaaatggtttagcggcatgaggtgggacagcttgtggtacctaaacctttcgcataattctttaacaggccacctacaacaatttcatttccataatctaaggtatcttgatcttaaatttaactcccttcagggtccactctctttgtccatttgtaacagtaacacgcttgaatttctagatttatcacgcaacaacttcagtaactcgattccaagctgcttgggaagcatgtctagtctaaaagtgttggacttaagaaggaacaatttcacaggggagtctttctccattatgtgagcagagcacttcattgagaaccattgtcttgaatgacaatcaatttgaaggaactctccctatgtcgttgctcaactgtattggtttagaagttcttgatatggggaataacgctataaatgacacatttccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="55320" stop="56420"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="55620" g_stop="56120" g_length="501"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="502" r_length="502" r_score="0.904"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E607222" ref_strand="+">
        <total_alignment_score>0.904</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E607222" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="55620" e_stop="56120"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGACAAATGTAAAGAAACTTCAGGCCTTGGATATTTCTAACAATAAGATTGGTGGCCAAATCCCAAACTGGTTTAGCGGCATAAGGTGGGACAACTTGTACTACCTAAATCTTTCGCATAATTCTTTAACAGGCCACCTACCAAAATTTCATTTCCATAATATAGGGTATCTTGATCTTAAATTTAACTTCCTTCAGGGTCCACTACCTTCATCAGTTTGTAACATGAACTATCTTCAATCTCTACATTTATCACACAACAACTTCAGTAACTCGATTCCAAGTTGCTTGGGAAGCATGTCTAGTCTAAAAGTGTTGGACTTAAGAAGGAACAATTTCACA-GGAAGTCTTCCCCCATTATGTGCGCAGAACACTTCATTGAGAACCATTGTCTTGAATGGTAATCAATTTGAAGGAACTCTCCCTTTCTCGTTGCTCAACTGTAGTAATTTAGAAGTTGTTGATATACGGAATAACGCTATAAATGACACATTTCCTG</genome_strand>
        <mrna_strand>TCTTGACAAATGTAAAGAAACTTCAGGTCTTGGATATTTCTAACAATAAGATTCGTGGTCAAATCCCAAAATGGTTTAGCGGCATGAGGTGGGACAGCTTGTGGTACCTAAACCTTTCGCATAATTCTTTAACAGGCCACCTACAACAATTTCATTTCCATAATCTAAGGTATCTTGATCTTAAATTTAACTCCCTTCAGGGTCCACTCTCTTTGTCCATTTGTAACAGTAACACGCTTGAATTTCTAGATTTATCACGCAACAACTTCAGTAACTCGATTCCAAGCTGCTTGGGAAGCATGTCTAGTCTAAAAGTGTTGGACTTAAGAAGGAACAATTTCACAGGGGAGTCTTTCTCCATTATGTGAGCAGAGCACTTCATTGAGAACCATTGTCTTGAATGACAATCAATTTGAAGGAACTCTCCCTATGTCGTTGCTCAACTGTATTGGTTTAGAAGTTCTTGATATGGGGAATAACGCTATAAATGACACATTTCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E542364" ref_strand="-" ref_description="SGN-E542364 [TUS-63-K5]">
      <seq>tcattgtacagatcgtatgaggattctgtgagtttggtgatcaaagnccaggacattgagctagaaagaatcagcacaattatgacaaccatagacctctcgagcaaccattttgaaggtgtcattccaaaaacactaaaggatctcagctcactttggctactcaatttatcccataacaatctcatcggtcatattccaatggaattggggcaattgaataagcttgaagcgttatatctctcctggaatcggctcacaggaaagattccaagggaattgataacaatgaagtttctagcagtcttaaacctctctcagaatcttcttattggatcgattcctcaaggtctacaattcaacacatttgaaaatgactcgtatggcggtaaccttgatctatgtggtcctcctttgtcaaagcaatgtggaacgagtgattcatcccatgttcctcaaccattggagtctgaagacgagtcatatttttttagtggatttacgtgggaatcagtagtcataggctacagctttggactagttgttggaactgttgtgtggagcctcgtgtttaaataccgtaagccagaatggtttgtcgaattttttgaaggcatttatcccaagaaaatgagaaggtcaatgaagagagctcggagacgacggacttaatggaagaatgtaagagtgaacttttctgtttttttagttatatttttgttgtttgtatatatgcttgataacaattaattgcatgtgttatattgtgaatttccactgaattaaaataagtgttcttgaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="56048" stop="57447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56348" g_stop="57146" g_length="799"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="800" r_length="800" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="801" polyA_stop="812"/>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E542364" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>799</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E542364" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="56348" e_stop="57146"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCATTGTACAGATCGTATGAGGATTCTGTGAGTTTGGTGATCAAAGGCCAGGACATTGAGCTAGAAAGAATCAGCACAATTATGACAACCATAGACCTCTCGAGCAACCATTTTGAAGGTGTCATTCCAAAAACACTAAAGGATCTCAGCTCACTTTGGCTACTCAATTTATCCCATAACAATCTCATCGGTCATATTCCAATGGAATTGGGGCAATTGAATAAGCTTGAAGCGTTATATCTCTCCTGGAATCGGCTCACAGGAAAGATTCCAAGGGAATTGATAACAATGAAGTTTCTAGCAGTCTTAAACCTCTCTCAGAATCTTCTTATTGGATCGATTCCTCAAGGTCTACAATTCAACACATTTGAAAATGACTCGTATGGCGGTAACCTTGATCTATGTGGTCCTCCTTTGTCAAAGCAATGTGGAACGAGTGATTCATCCCATGTTCCTCAACCATTGGAGTCTGAAGACGAGTCATATTTTTTTAGTGGATTTACGTGGGAATCAGTAGTCATAGGCTACAGCTTTGGACTAGTTGTTGGAACTGTTGTGTGGAGCCTCGTGTTTAAATACCGTAAGCCAGAATGGTTTGTCGAATTTTTTGAAGGCATTTATCCCAAGAAAATGAGAAGGTCAATGAAGAGAGCTCGGAGACGACGGACTTAATGGAAGAATGTAAGAGTGAACTTTTCTG-TTTTTTAGTTATATTTTTGTTGTTTGTATATATGCTTGATAACAATTAATTGCATGTGTTATATTGTGAATTTCCACTGAATTAAAATAAGTGTTCTTG</genome_strand>
        <mrna_strand>TCATTGTACAGATCGTATGAGGATTCTGTGAGTTTGGTGATCAAAGNCCAGGACATTGAGCTAGAAAGAATCAGCACAATTATGACAACCATAGACCTCTCGAGCAACCATTTTGAAGGTGTCATTCCAAAAACACTAAAGGATCTCAGCTCACTTTGGCTACTCAATTTATCCCATAACAATCTCATCGGTCATATTCCAATGGAATTGGGGCAATTGAATAAGCTTGAAGCGTTATATCTCTCCTGGAATCGGCTCACAGGAAAGATTCCAAGGGAATTGATAACAATGAAGTTTCTAGCAGTCTTAAACCTCTCTCAGAATCTTCTTATTGGATCGATTCCTCAAGGTCTACAATTCAACACATTTGAAAATGACTCGTATGGCGGTAACCTTGATCTATGTGGTCCTCCTTTGTCAAAGCAATGTGGAACGAGTGATTCATCCCATGTTCCTCAACCATTGGAGTCTGAAGACGAGTCATATTTTTTTAGTGGATTTACGTGGGAATCAGTAGTCATAGGCTACAGCTTTGGACTAGTTGTTGGAACTGTTGTGTGGAGCCTCGTGTTTAAATACCGTAAGCCAGAATGGTTTGTCGAATTTTTTGAAGGCATTTATCCCAAGAAAATGAGAAGGTCAATGAAGAGAGCTCGGAGACGACGGACTTAATGGAAGAATGTAAGAGTGAACTTTTCTGTTTTTTTAGTTATATTTTTGTTGTTTGTATATATGCTTGATAACAATTAATTGCATGTGTTATATTGTGAATTTCCACTGAATTAAAATAAGTGTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E542371" ref_strand="+" ref_description="SGN-E542371 [TUS-63-K9]">
      <seq>ttttctttattacggaaacttattttaattcagtggaaattcacaatataacacatgcaattaattgttatcaagcatatatacaaacaacaaaaatataactaaaaaaacagaaaagttcactcttacattcttccattaagtccgtcgtctccgagctctcttcattgaccttctcattttcttgggataaatgccttcaaaaaattcgacaaaccattctggcttacggtatttaaacacgaggctccacacaacagttccaacaactagtccaaagctgtagcctatgactactgattcccacgtaaatccactaaaaaaatatgactcgtcttcagactccaatggttgaggaacatgggatgaatcactcgttccacattgctttgacaaaggaggaccacatagatcaaggttaccgccatacgagtcattttcaaatgtgttgaattgtagaccttgaggaatcgatccaataagaagattctgagagaggtttaagactgctagaaacttcattgttatcaattcccttggaatctttcctgtgagccgattccaggagagatataacgcttcaagcttattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="57443" stop="56265"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57139" g_stop="56565" g_length="575"/>
          <reference_exon_boundary r_type="cDNA" r_start="18" r_stop="593" r_length="576" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E542371" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>575</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E542371" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57139" e_stop="56565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTTATTTTAATTCAGTGGAAATTCACAATATAACACATGCAATTAATTGTTATCAAGCATATATACAAACAACAAAAATATAACT-AAAAAACAGAAAAGTTCACTCTTACATTCTTCCATTAAGTCCGTCGTCTCCGAGCTCTCTTCATTGACCTTCTCATTTTCTTGGGATAAATGCCTTCAAAAAATTCGACAAACCATTCTGGCTTACGGTATTTAAACACGAGGCTCCACACAACAGTTCCAACAACTAGTCCAAAGCTGTAGCCTATGACTACTGATTCCCACGTAAATCCACTAAAAAAATATGACTCGTCTTCAGACTCCAATGGTTGAGGAACATGGGATGAATCACTCGTTCCACATTGCTTTGACAAAGGAGGACCACATAGATCAAGGTTACCGCCATACGAGTCATTTTCAAATGTGTTGAATTGTAGACCTTGAGGAATCGATCCAATAAGAAGATTCTGAGAGAGGTTTAAGACTGCTAGAAACTTCATTGTTATCAATTCCCTTGGAATCTTTCCTGTGAGCCGATTCCAGGAGAGATATAACGCTTCAAGCTTATTCA</genome_strand>
        <mrna_strand>ACTTATTTTAATTCAGTGGAAATTCACAATATAACACATGCAATTAATTGTTATCAAGCATATATACAAACAACAAAAATATAACTAAAAAAACAGAAAAGTTCACTCTTACATTCTTCCATTAAGTCCGTCGTCTCCGAGCTCTCTTCATTGACCTTCTCATTTTCTTGGGATAAATGCCTTCAAAAAATTCGACAAACCATTCTGGCTTACGGTATTTAAACACGAGGCTCCACACAACAGTTCCAACAACTAGTCCAAAGCTGTAGCCTATGACTACTGATTCCCACGTAAATCCACTAAAAAAATATGACTCGTCTTCAGACTCCAATGGTTGAGGAACATGGGATGAATCACTCGTTCCACATTGCTTTGACAAAGGAGGACCACATAGATCAAGGTTACCGCCATACGAGTCATTTTCAAATGTGTTGAATTGTAGACCTTGAGGAATCGATCCAATAAGAAGATTCTGAGAGAGGTTTAAGACTGCTAGAAACTTCATTGTTATCAATTCCCTTGGAATCTTTCCTGTGAGCCGATTCCAGGAGAGATATAACGCTTCAAGCTTATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E266711" ref_strand="-" ref_description="SGN-E266711 [cLEI-5-J6]">
      <seq>ttcattagtaaccatcttatcaatgaaattgattttgctacaatccatgcatacactgatcaatggttatctggacaaagtgatgaagcacaattggcgtggatggaaaagtggataagaagtcattgggaagatgcaagaaatatattgaagaaacctttagtgcttgctgaatttggaaagtctagtagatcaggtgaaggatcaagagatatatttatgagtagtgtgtacagaaatgtgtataatttggcaaaagaaggtggaacaatgggaggaagtttagtatggcaactaatggcacatggaatggagaattatgatgatggttattctattgttttgggactaaatccttcaactacacaaattatctcaaaccaagctcatatcatgactgctttggctcattctctcaatcatgagtgaagacatcataataatcaatttataatctatcatttttagtattattaatttgagatgatattaccaaacatgttcaagttgattaaacacaagaatgtaattgaataaattgttttagtaaaaaggaaagttatgttataaaaaaaaaaaaaaaaaaaaacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="58134" stop="56884"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57834" g_stop="57770" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="65" r_length="65" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57769" i_stop="57688" i_length="82">
            <donor d_prob="0.992" d_score="0.98"/>
            <acceptor a_prob="0.950" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57687" g_stop="57189" g_length="499"/>
          <reference_exon_boundary r_type="cDNA" r_start="66" r_stop="563" r_length="498" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="567" polyA_stop="589"/>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E266711" ref_strand="-">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>564</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266711" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57834" e_stop="57770"/>
          <exon e_start="57687" e_stop="57189"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTAGTAACCATTTTATCAATGAAATTGATTTTGCTACAATCCATGCATACACTGATCAATGGTATGTAGTATTTTATATGATCTTTCAGATCTGTACGTACATTTTTATAAGTTTAAATATTTATTTATATCGATGGTTATAGATTATCTGGACAAAGTGATGAAGCACAATTGGTGTGGATGGAAAAGTGGATAAGAAGTCATTGGGAAGATGCAAGAAATATATTGAAGAAACCTTTAGTGCTTGCTGAATTTGGAAAGTCTAGTAGATCAGGTGAAGGATCAAGAGATATATTTATGAGTAGTGTGTACAGAAATGTGTATAATTTGGCAAAAGAAGGTGGAACAATGGGAGGAAGTTTAGTATGGCAACTAATGGCACATGGAATGGAGAATTATGATGATGGTTATTCTATTGTTTTGGGACTAAATCCTTCAACTACACAAATTATCTCAAACCAAGCTCATATCATGACTGCTTTGGCTCATTCTCTCAATTCATGAGTGAAGACATCATAATAATCAATTTATAATCTATCATTTTTAGTATTATTAATTTGAGATGATATTACCAAACATGTTCAAGTTGATTAAACACAAGAATGTAATTGAATAAATTGTTTTAGTAAAAAGGAAAGTTAT</genome_strand>
        <mrna_strand>TTCATTAGTAACCATCTTATCAATGAAATTGATTTTGCTACAATCCATGCATACACTGATCAATG..................................................................................GTTATCTGGACAAAGTGATGAAGCACAATTGGCGTGGATGGAAAAGTGGATAAGAAGTCATTGGGAAGATGCAAGAAATATATTGAAGAAACCTTTAGTGCTTGCTGAATTTGGAAAGTCTAGTAGATCAGGTGAAGGATCAAGAGATATATTTATGAGTAGTGTGTACAGAAATGTGTATAATTTGGCAAAAGAAGGTGGAACAATGGGAGGAAGTTTAGTATGGCAACTAATGGCACATGGAATGGAGAATTATGATGATGGTTATTCTATTGTTTTGGGACTAAATCCTTCAACTACACAAATTATCTCAAACCAAGCTCATATCATGACTGCTTTGGCTCATTCTCTCAA-TCATGAGTGAAGACATCATAATAATCAATTTATAATCTATCATTTTTAGTATTATTAATTTGAGATGATATTACCAAACATGTTCAAGTTGATTAAACACAAGAATGTAATTGAATAAATTGTTTTAGTAAAAAGGAAAGTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E266957" ref_strand="+" ref_description="SGN-E266957 [cLEI-7-H19]">
      <seq>aatgagcctcgcgatcaagctgactattcaggaaaaactgttaatggttgggttcaagaaatggcaagttttgtgaagtcattagacaacaaacacttgttagaggttggaatggagggattttatggtgattcaattcctgaaaggaagtcagttaatcctggttatcaagttggaacagatttcattagtaatcatcttatcaatgaaattgattttgctactatccatgcatacactgaccaatgggtgtctggacaaagcgatgatgcacagttggtgtggatggaaaagtggataacaagtcattgggaagatgcaagaaatatattaaagaaacctctagtgcttgctgaatttggaaagtctagtagaggtcaaggatcaagagatatatttatgagtagtgtatatagaaatgtgtacaatttggcaaaagaaggtggaacaatggcaggaagtttagtttggcaactaatggcacatggaatggagaattatgatgatggctattgcattgttttgggacaaaccccttcaactac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="58278" stop="57088"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57972" g_stop="57770" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="248" r_length="203" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57769" i_stop="57688" i_length="82">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.950" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57687" g_stop="57388" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="545" r_length="297" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E266957" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E266957" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57972" e_stop="57770"/>
          <exon e_start="57687" e_stop="57388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGGGTTCAAGAAATGGCGAGATTTGTGAAGTCATTATACAACAAACACTTGTTGGAAGTTGGAATGGAAGGATTTTATGGTGATTCAATTCCTAAAAGAAAATTAGTTAATCCTGGTTATCAAGTTGGAACAGATTTCATTAGTAACCATTTTATCAATGAAATTGATTTTGCTACAATCCATGCATACACTGATCAATGGTATGTAGTATTTTATATGATCTTTCAGATCTGTACGTACATTTTTATAAGTTTAAATATTTATTTATATCGATGGTTATAGATTATCTGGACAAAGTGATGAAGCACAATTGGTGTGGATGGAAAAGTGGATAAGAAGTCATTGGGAAGATGCAAGAAATATATTGAAGAAACCTTTAGTGCTTGCTGAATTTGGAAAGTCTAGTAGATCAGGTGAAGGATCAAGAGATATATTTATGAGTAGTGTGTACAGAAATGTGTATAATTTGGCAAAAGAAGGTGGAACAATGGGAGGAAGTTTAGTATGGCAACTAATGGCACATGGAATGGAGAATTATGATGATGGTTATTCTATTGTTTTGGGACTAAATCCTTCAACTAC</genome_strand>
        <mrna_strand>GGTTGGGTTCAAGAAATGGCAAGTTTTGTGAAGTCATTAGACAACAAACACTTGTTAGAGGTTGGAATGGAGGGATTTTATGGTGATTCAATTCCTGAAAGGAAGTCAGTTAATCCTGGTTATCAAGTTGGAACAGATTTCATTAGTAATCATCTTATCAATGAAATTGATTTTGCTACTATCCATGCATACACTGACCAATG..................................................................................GGTGTCTGGACAAAGCGATGATGCACAGTTGGTGTGGATGGAAAAGTGGATAACAAGTCATTGGGAAGATGCAAGAAATATATTAAAGAAACCTCTAGTGCTTGCTGAATTTGGAAAGTCTAGTAG---AGGTCAAGGATCAAGAGATATATTTATGAGTAGTGTATATAGAAATGTGTACAATTTGGCAAAAGAAGGTGGAACAATGGCAGGAAGTTTAGTTTGGCAACTAATGGCACATGGAATGGAGAATTATGATGATGGCTATTGCATTGTTTTGGGACAAACCCCTTCAACTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E265650" ref_strand="+" ref_description="SGN-E265650 [cLEI-14-P15]">
      <seq>caaacacttgttagaggttggaatggagggattttatggtgattcaattcctgaaaggaagtcagttaatcctggttatcaagttggaacagatttcattagtaatcatcttatcaatgaaattgattttgctactatccatgcatacactgaccaatgggtgtctggacaaagcgatgatgcacagttggtgtggatggaaaagtggataacaagtcattgggaagatgcaagaaatatattaaagaaacctctagtgcttgctgaatttggaaagtctagtagaggtcaaggatcaagagatatatttatgagtagtgtatatagaaatgtgtacaatttggcaaaagaaggtggaacaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="58228" stop="57180"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57928" g_stop="57770" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="0.931"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57769" i_stop="57688" i_length="82">
            <donor d_prob="0.992" d_score="0.94"/>
            <acceptor a_prob="0.950" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57687" g_stop="57480" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="364" r_length="205" r_score="0.923"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E265650" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E265650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57928" e_stop="57770"/>
          <exon e_start="57687" e_stop="57480"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAACACTTGTTGGAAGTTGGAATGGAAGGATTTTATGGTGATTCAATTCCTAAAAGAAAATTAGTTAATCCTGGTTATCAAGTTGGAACAGATTTCATTAGTAACCATTTTATCAATGAAATTGATTTTGCTACAATCCATGCATACACTGATCAATGGTATGTAGTATTTTATATGATCTTTCAGATCTGTACGTACATTTTTATAAGTTTAAATATTTATTTATATCGATGGTTATAGATTATCTGGACAAAGTGATGAAGCACAATTGGTGTGGATGGAAAAGTGGATAAGAAGTCATTGGGAAGATGCAAGAAATATATTGAAGAAACCTTTAGTGCTTGCTGAATTTGGAAAGTCTAGTAGATCAGGTGAAGGATCAAGAGATATATTTATGAGTAGTGTGTACAGAAATGTGTATAATTTGGCAAAAGAAGGTGGAACAATG</genome_strand>
        <mrna_strand>CAAACACTTGTTAGAGGTTGGAATGGAGGGATTTTATGGTGATTCAATTCCTGAAAGGAAGTCAGTTAATCCTGGTTATCAAGTTGGAACAGATTTCATTAGTAATCATCTTATCAATGAAATTGATTTTGCTACTATCCATGCATACACTGACCAATG..................................................................................GGTGTCTGGACAAAGCGATGATGCACAGTTGGTGTGGATGGAAAAGTGGATAACAAGTCATTGGGAAGATGCAAGAAATATATTAAAGAAACCTCTAGTGCTTGCTGAATTTGGAAAGTCTAGTAG---AGGTCAAGGATCAAGAGATATATTTATGAGTAGTGTATATAGAAATGTGTACAATTTGGCAAAAGAAGGTGGAACAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E293627" ref_strand="+" ref_description="SGN-E293627 [cLET-15-L4]">
      <seq>tggcgagtcgttgcttctgttttggaaaacctttgagccccggtggttcaaggggctgtgctgttctgttattcgtcatgtgttgggttacatttttcatcgcggaggtgtgtttgttggctggttcagttaggaacgcgtatcataccaagtatagatcatcgctcttgtttaatgatcgacctgtatcttgtgagactgtgagaaaaggcgtttttgctgctggagccgcgtttattttcttcactagcataatcaataagttttactttatcagttactccaacgctaagagtggagctggaccatatggtggagaagctggtgtgggaatggcagcctacaaatgaatatgatcaatcatgaagntctatatgtataataatttttcagtttttagttgtacttgacttcataatttggtacttttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="70453" stop="69338"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70153" g_stop="70069" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="70068" i_stop="69990" i_length="79">
            <donor d_prob="0.622" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69989" g_stop="69638" g_length="352"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="437" r_length="352" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E293627" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>437</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E293627" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70153" e_stop="70069"/>
          <exon e_start="69989" e_stop="69638"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCGAGTCGTTGCTTCTGTTTTGGAAAACCTTTGAGCCCCGGTGGTTCAAGGGGCTGTGCTGTTCTGTTATTCGTCATGTGTTGGTATTTGACTTACCACAATATAATTTTTTTCAGACTCAATATAATGTGATAATAATTAAGTTGTTAACCTATGTTTTAGGGTTACATTTTTCATCGCGGAGGTGTGTTTGTTGGCTGGTTCAGTTAGGAACGCGTATCATACCAAGTATAGATCATCGCTCTTGTTTAATGATCGACCTGTATCTTGTGAGACTGTGAGAAAAGGCGTTTTTGCTGCTGGAGCCGCGTTTATTTTCTTCACTAGCATAATCAATAAGTTTTACTTTATCAGTTACTCCAACGCTAAGAGTGGAGCTGGACCATATGGTGGAGAAGCTGGTGTGGGAATGGCAGCCTACAAATGAATATGATCAATCATGAAGTTCTATATGTATAATAATTTTTCAGTTTTTAGTTGTACTTGACTTCATAATTTGGTACTTTTTTTTTTT</genome_strand>
        <mrna_strand>TGGCGAGTCGTTGCTTCTGTTTTGGAAAACCTTTGAGCCCCGGTGGTTCAAGGGGCTGTGCTGTTCTGTTATTCGTCATGTGTTG...............................................................................GGTTACATTTTTCATCGCGGAGGTGTGTTTGTTGGCTGGTTCAGTTAGGAACGCGTATCATACCAAGTATAGATCATCGCTCTTGTTTAATGATCGACCTGTATCTTGTGAGACTGTGAGAAAAGGCGTTTTTGCTGCTGGAGCCGCGTTTATTTTCTTCACTAGCATAATCAATAAGTTTTACTTTATCAGTTACTCCAACGCTAAGAGTGGAGCTGGACCATATGGTGGAGAAGCTGGTGTGGGAATGGCAGCCTACAAATGAATATGATCAATCATGAAGNTCTATATGTATAATAATTTTTCAGTTTTTAGTTGTACTTGACTTCATAATTTGGTACTTTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E290024" ref_strand="+" ref_description="SGN-E290024 [cLET-5-I5]">
      <seq>aaattttgaaaaaaaataatattttttttatgaaaaaaaaagaagttttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76056" stop="77825"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76356" g_stop="76606" g_length="251"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="251" r_length="251" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77525" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="374" r_length="123" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E290024" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>374</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E290024" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76356" e_stop="76606"/>
          <exon e_start="77403" e_stop="77525"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATTTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATA</genome_strand>
        <mrna_strand>AAATTTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E207528" ref_strand="+" ref_description="SGN-E207528 [cLEC-36-H8]">
      <seq>aattttgaaaaaaaataatattttttttatgaaaaaaaaagaagttttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76057" stop="78800"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76357" g_stop="76606" g_length="250"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="250" r_length="250" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="522" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78500" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="567" r_length="45" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E207528" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207528" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76357" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78500"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGT</genome_strand>
        <mrna_strand>AATTTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E213412" ref_strand="+" ref_description="SGN-E213412 [cLEC-71-M2]">
      <seq>ttttgaaaaaaaataatattttttttatgaaaaaaaaagaagttttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaaagattcaagtggaccaaaacctctgatgtctggtttacacagcagtaatgaatacagccatggttcgtcgacttcgtcatcatcccaattcgatgatatgctcgaatcattaccagaaatggacgatcgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76059" stop="78923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76359" g_stop="76606" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="520" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78623" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="688" r_length="168" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E213412" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>688</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E213412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76359" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTC</genome_strand>
        <mrna_strand>TTTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAAGATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E211505" ref_strand="+" ref_description="SGN-E211505 [cLEC-67-B16]">
      <seq>tttgaaaaaaaataatattttttttatgaaaaaaaaaagaagttttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccaaaacctctgatgtctggtttacacagcagtaatgaatacagccatggttcgtcgacttcgtcatcatcccaattcgatgatatgctcgaatcattaccagaaatggacgatcgattctccaatttacccgagttgaactctctcaggccgagaattcaacctcgatcgtctggattcagccatttcgattggggcattctcgctgggctcaaccaatgccggaattgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76060" stop="79038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76360" g_stop="76606" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="520" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78738" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="521" r_stop="799" r_length="279" r_score="0.968"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E211505" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>802</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E211505" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76360" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78738"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAAAAAAAATAATATTTTTTTTATGAAAAAA-AAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGG</genome_strand>
        <mrna_strand>TTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCCGAGTTGAACTCTCTC-AGGCCGAG-AATTCAACCTCGATCGTCTGGATTCAGCC-ATTTCGATTGGGGCATTCTCGCTGGGCTC-AACCAATGCCGGAATTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E203442" ref_strand="+" ref_description="SGN-E203442 [cLEC-15-C21]">
      <seq>aataatattttttttatgaaaaaaaaagaagttttttattaattaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76070" stop="78776"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76370" g_stop="76606" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="236" r_length="236" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="508" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78476" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="529" r_length="21" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E203442" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76370" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGT</genome_strand>
        <mrna_strand>AATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATT-AAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E278663" ref_strand="+" ref_description="SGN-E278663 [cLER-10-N1]">
      <seq>aaaaaaagaagttttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaagggtgctggacatgattttcctctacaaatgattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76090" stop="77868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76390" g_stop="76606" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77568" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="383" r_length="166" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E278663" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>383</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E278663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76390" e_stop="76606"/>
          <exon e_start="77403" e_stop="77568"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGC</genome_strand>
        <mrna_strand>AAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAGGGTGCTGGACATGATTTTCCTCTACAAATGATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E246511" ref_strand="+" ref_description="SGN-E246511 [cLEF-45-I21]">
      <seq>aaaaaagaagttttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccaaaacctctgatgtctggtttacacagcagtaatgaata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76091" stop="78844"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76391" g_stop="76606" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="488" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78544" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="577" r_length="89" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E246511" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E246511" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76391" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATA</genome_strand>
        <mrna_strand>AAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E245527" ref_strand="+" ref_description="SGN-E245527 [cLEF-43-D24]">
      <seq>aaaaaagattttttttattaattaaaaaaaaaattatgggtgttcaagaaggagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaagttcgggttattggaaagcaacggggacggataaggggataacttcccaaggaagaaaagttggaattaagaaagctctcgngttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagtttaaagctagatgaatgggtgctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76091" stop="78774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76391" g_stop="76606" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="217" r_stop="488" r_length="272" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78475" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="508" r_length="20" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E245527" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>508</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76391" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78475"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTG</genome_strand>
        <mrna_strand>AAAAAAGATTTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAGGAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAAGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGGGATAACTTCCCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTCGNGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTTAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E433908" ref_strand="+" ref_description="SGN-E433908 [STM-59-M19]">
      <seq>aagaatagttttttaataaaaaaatatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggattcagattttatccaactgatgaagaacttttagttcaatatttgtgtaagaaagttgctggacatgattttcctctacaaattattggagaaattgatttatacaaatttgatccttgggttctacctagtaaggcgacatttggagaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatagagtagcaggttccggttattggaaagcaacgggaacggataagatcataacttcgcaaggaagaaaagttggaattaagaaagcccttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaagaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccaaaacctcttatgtctggtttacacagcagcaatgagtacagccacggttcatcgacttcgtcctcatcccaattcgatgatatgctcgaatcgttaccagaaatggatgatcgattctccaatttaccgagattgaactctcttaagaccgagaaattgaacctcgaacgcctggattcagccaattttgattgggcgatccttgctgggctcaaaccaatgccggaattgcgcccagcaatcaagctccaggcgttcagggtcaggctcaggggcatgtcaataac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76106" stop="79094"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76398" g_stop="76606" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="478" r_length="272" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78794" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="816" r_length="338" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E433908" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E433908" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76398" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78794"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAAC</genome_strand>
        <mrna_strand>AAGAATAGT-TT-TTTAATAAAAAAAT-ATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTCAGATTTTATCCAACTGATGAAGAACTTTTAGTTCAATATTTGTGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGAGAAATTGATTTATACAAATTTGATCCTTGGGTTCTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGAGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATAGAGTAGCAGGTTCCGGTTATTGGAAAGCAACGGGAACGGATAAGATCATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCCCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAAGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTTATGTCTGGTTTACACAGCAGCAATGAGTACAGCCACGGTTCATCGACTTCGTCCTCATCCCAATTCGATGATATGCTCGAATCGTTACCAGAAATGGATGATCGATTCTCCAATTTACCGAGATTGAACTCTCTTAAGACCGAGAAATTGAACCTCGAACGCCTGGATTCAGCCAATTTTGATTGGGCGATCCTTGCTGGGCTCAAACCAATGCCGGAATTGCGCCCAGC-AATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E404440" ref_strand="+" ref_description="SGN-E404440 [PPC-14-C11]">
      <seq>aagaatagttttttaataaaaaaatatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggattcagattttatccaactgatgaagaacttttagttcaatatttgtgtaagaaagttgctggacatgattttcctctacaaattattggagaaattgatttatacaaatttgatccttgggttctacctagtaaggcgacatttggagaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatagagtagcaagttccggttattggaaagcaacgggaacggataagatcataacttcgcaaggaagaaaagttggaattaagaaagcccttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaagaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaaaatttcaagtggaccaaaacctcttatggctggtttacacagcagccatgagtacagccacggttcatcgaacttcgtcctcatcccaattcgatgatatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76106" stop="78891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76398" g_stop="76606" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="206" r_length="206" r_score="0.933"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="478" r_length="272" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78591" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="615" r_length="137" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E404440" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E404440" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76398" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78591"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCG-ACTTCGTCATCATCCCAATTCGATGATATGC</genome_strand>
        <mrna_strand>AAGAATAGT-TT-TTTAATAAAAAAAT-ATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTCAGATTTTATCCAACTGATGAAGAACTTTTAGTTCAATATTTGTGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGAGAAATTGATTTATACAAATTTGATCCTTGGGTTCTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGAGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATAGAGTAGCAAGTTCCGGTTATTGGAAAGCAACGGGAACGGATAAGATCATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCCCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAAGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAAATTTCAAGTGGACCAAAACCTCTTATGGCTGGTTTACACAGCAGCCATGAGTACAGCCACGGTTCATCGAACTTCGTCCTCATCCCAATTCGATGATATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E747662" ref_strand="+" ref_description="SGN-E747662 [GI|6175245]">
      <seq>agttttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccaaaacctctgatgtctggtttacacagcagtaatgaatacagccatggttcgtcgacttcgtcatcatcccaattcgatgatatgctcgaatcattaccagaaatggacgatcgattctccaatttaccgaggttgaactctctcaaggccgagaaattcaacctcgatcgtctggattcagccaatttcgattgggcaattctcgctgggctcaaaccaatgccggaattgggcccagcaaatcaagctccaggcgttcagggtcaggctcaggggcatgtcaataaccacattcacagcgacaacaacaatatgaattttctcaacgatgtttacgcccatcctccaaatttccgaggcaacacaaaggttgaaagtattaatctagacgaagaagttgaaagcgggaaaagaaatcaacggattgaccaatcgagttacttccaacagagtctcaatggattttcccaagcgtatacaaacaatgtggatcaattcgggatccaatgtccgaatcagacgttaaatctcgggttcaagcagtagaggatactggaaagtaagaaaagttgtagctcgaaatctgaatgccagtatactgtgtatatatacagaaggcctggatttagatttccttggcccaacggattcgaagaaagagcaagtacagtatcatgccaaggaaattaagtccttcgagggcacgtctgggcagacgtcgtggacgttatttgcaagttcttgcaattgtgtctgaagtcattaggctgagtggcacttcttatttgcaagttgtgtttgaagtcattaggccgaaggcacgtctgcgtggacgataaaataatgtacacaaacaggagatatatgcaggggcgtgtatattcttttaggaaactgggcttttagtttgttttattttatgatacatttccagatttggatgtattttgtaatttttacatttctgtgtagcaagttagaagatatatagaaagatacttttaaaatactttttataaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76099" stop="123528"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76399" g_stop="76606" g_length="208"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="208" r_length="208" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="480" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="79542" g_length="1087"/>
          <reference_exon_boundary r_type="cDNA" r_start="481" r_stop="1567" r_length="1087" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E747662" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>1567</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E747662" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76399" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="79542"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATTTTTACATTTCTGTGTAGCAAGTTAGAAGATATATAGAAAGATACTTTTAAAATACTTTTTATAATTTGTCATTTTAATTAA</genome_strand>
        <mrna_strand>AGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATTTTTACATTTCTGTGTAGCAAGTTAGAAGATATATAGAAAGATACTTTTAAAATACTTTTTATAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E251664" ref_strand="+" ref_description="SGN-E251664 [cLEG-15-J19]">
      <seq>gatcccccgggctgcaggttttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76098" stop="77979"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76401" g_stop="76606" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="19" r_stop="224" r_length="206" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="496" r_length="272" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E251664" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>478</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251664" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76401" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG</genome_strand>
        <mrna_strand>TTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E375266" ref_strand="+" ref_description="SGN-E375266 [TUS-34-L5]">
      <seq>tttttattaattaaaaaaaaaattatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76102" stop="77929"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76402" g_stop="76606" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77629" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="432" r_length="227" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E375266" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E375266" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76402" e_stop="76606"/>
          <exon e_start="77403" e_stop="77629"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAA</genome_strand>
        <mrna_strand>TTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E610694" ref_strand="+" ref_description="SGN-E610694 [57860]">
      <seq>aaaaaatatttgaaaaaaagaatagttttttaataaaaaaatatgggtgttcaagaaaaagatccacttttgcaattaagtttaccaccaggattcagattttatccaactgatgaagaacttttagttcaatatttgtgtaagaaagttgctggacatgattttcctctacaaattattggagaaattgatttatacaaatttgatccttgggttctacctagtaaggcgacatttggagaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatagagtagcaggttccggttattggaaagcaacgggaacggataagatcataacttcgcaaggaagaaaagttggaattaagaaagcccttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaagaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccaaaacctcttatgtctggtttacacagcagcaatgagtacagccacggttcatcgacttcgtcctcatcccaattcgatgatatgctcgaatcgttaccagaaatggatgatcgattctccaatttaccgagattgaacttctcttaagaccgagaaaattgaacctcggaacgcctggattcagccaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76106" stop="78994"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76412" g_stop="76606" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="223" r_length="194" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="495" r_length="272" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78695" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="496" r_stop="738" r_length="243" r_score="0.913"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E610694" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="0.958" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E610694" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76412" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78695"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAAC-TCTCTCAAGGCCGAG-AAATTCAACCTC-GATCGTCTGGATTCAGCCAATTTC</genome_strand>
        <mrna_strand>TTAATAAAAAAA-TATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTCAGATTTTATCCAACTGATGAAGAACTTTTAGTTCAATATTTGTGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGAGAAATTGATTTATACAAATTTGATCCTTGGGTTCTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGAGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATAGAGTAGCAGGTTCCGGTTATTGGAAAGCAACGGGAACGGATAAGATCATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCCCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAAGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTTATGTCTGGTTTACACAGCAGCAATGAGTACAGCCACGGTTCATCGACTTCGTCCTCATCCCAATTCGATGATATGCTCGAATCGTTACCAGAAATGGATGATCGATTCTCCAATTTACCGAGATTGAACTTCTCTTAAGACCGAGAAAATTGAACCTCGGAACGCCTGGATTCAGCCAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E249782" ref_strand="+" ref_description="SGN-E249782 [cLEF-57-J23]">
      <seq>aaagatccacttttgcaattaagtttaccaccaggatttagattttatccaactgatgaagagcttttagttcaatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccaaaacctctgatgtctggtttacacagcagtaatgaatacagccatggttcgtcgacttcgtcatcatcccaattcgatgatatgctcgaatcattaccagaaatggacgatcgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76141" stop="78923"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76441" g_stop="76606" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="438" r_length="272" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78623" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="606" r_length="168" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E249782" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E249782" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76441" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78623"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTC</genome_strand>
        <mrna_strand>AAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E458542" ref_strand="+" ref_description="SGN-E458542 [cPRO-6-G9]">
      <seq>ccaggattcagattttatccaactgatgaagaacttttagttcaatatttgtgtaagaaagttgctggacatgattttcctctacaaattattggagaaattgatttatacaaatttgatccttgggttctacctagtaaggcgacatttggagaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatagagtagcaggttccggttattggaaagcaacgggaacggataagatcataacttcgcaaggaagaaaagttggaattaagaaagcccttgtgttttatgtgggtaaagctccaaaaggatcccagaagaattggattatgcatgaatatagactttttgaatcttccaagaaaaataatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76171" stop="77965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76471" g_stop="76606" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="136" r_length="136" r_score="0.963"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="0.96"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77665" g_length="263"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="399" r_length="263" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E458542" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>399</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E458542" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76471" e_stop="76606"/>
          <exon e_start="77403" e_stop="77665"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGA</genome_strand>
        <mrna_strand>CCAGGATTCAGATTTTATCCAACTGATGAAGAACTTTTAGTTCAATATTTGTGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGAGAAATTGATTTATACAAATTTGATCCTTGGGTTCTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGAGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATAGAGTAGCAGGTTCCGGTTATTGGAAAGCAACGGGAACGGATAAGATCATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCCCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCCAGAAGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCCAAGAAAAATAATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E729019" ref_strand="+" ref_description="SGN-E729019 [LA19CH06]">
      <seq>aggagcttttagttcatatttatgtaagaaagttgctggacatgattttcctctacaaattattggtgaaattgatttatacaaatttgatccttgggttttacctagtaaggcgacatttggtgaaaaagaatggtatttcttcagtccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatatactttttgaatcttcaaggaaaaataatggaagttcacagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccataacctctgatgtctggtttacacagcagtaatgaatacagccatggttcgtcgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="76201" stop="78863"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76499" g_stop="76606" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="107" r_length="107" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796">
            <donor d_prob="0.941" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="77403" g_stop="77674" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="108" r_stop="379" r_length="272" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="0.96"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78456" g_stop="78563" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="380" r_stop="487" r_length="108" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E729019" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>488</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E729019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76499" e_stop="76606"/>
          <exon e_start="77403" e_stop="77674"/>
          <exon e_start="78456" e_stop="78563"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTAGTAAGTTTCTAGTTTTATACAATCTTTTGTTTTTATTTTTTTCACTTACTCTCTCGAATTTGAGACCTCTGGATTAAGAATAAATGAAATTATATTCATTTCATAGTTTAATTAAAGTTTTGGTCCTATTGTTTTAGTTTTAATGGATGGATTCATGATTAAAGTCAATTTATATCTAAAATATAGAATTGAGTTTTAGTTATTTTGAATTGATTAATTAAAAAAAAATTGTTGTATGATAATAAAATGATGATTTATGTATTGGAATTTTGAATGAGGGAGGAAAACAAAAAAAACAACTTTTGAAACTTATATAAGTTTTAAGTAAGATTTGAAAGTTTGTCATTTAGACATTACAAGAAAATTTAATGTATTGTTTTGGATTAAATTTTAACTTAAATTATTTTTAATTACTGAAATGATGCAGGTGAAATATAAGTTAAATTATTTTTGATCATTAAAATGATGCAGGTTAAATGATATTATACTATTGGTACTTTTGAACTCGAGAGCTTAAATTTAAGTTAAATTACTTTCTTATTACTGAGACGACGCAATTTAAATTAAAATATTTTTTATTATTAAAATGTTGCAGGTCAAATGATATTGTACTATTTGATACTTTTGGATTTGATAGGCCAAATTTAAGTTAAATTATTTTTCGATTACTGAAATGATGCAAGTTAAATTTAAGTTAAATTATTTTCAATCACTGAAATGATGCAGGTCAAATGATATTGTACTATTGATATTTTGAATTCGATAAATGATGGATAATGTGTTACCTTTTGCATAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACT</genome_strand>
        <mrna_strand>AGGAGCTTTTAGTTC-ATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATATACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCACAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCATAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E698798" ref_strand="+" ref_description="SGN-E698798 [FA07CE06]">
      <seq>ttaataaggcgacatttggtgaaaaagaatggtatttcttctttccgagggataggaagtatccgaatggatctagaccgaatcgagtagcaggttcgggttattggaaagcaacggggacggataaggtgataacttcgcaaggaagaaaagttggaattaagaaagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccaaaacctctgatgtctggtttacacagcagtaatgaatacagccatggttcgtcgacttcgtcatcatcccaattcgatgatatgctcgaatcattaccagaaatggacgatcgattctccaatttaccgaggttgaactctctcaaggccgagaaattcaacctcgatcgtctggattcagccaatttcgattgggcaattctcgctgggctcaaaccaatgccggaattgggcccagcaaatcaagctccaggcgttcagggtcaggctcaggggcatgtcaataaccacattcacagcgacaacaacaatatgaattttctcaacgatgtttacgcccatcctccaaatttccgaggcaacacaaaggttgaaagtattaatctagacgaagaagttgaaagcgggaaaagaaatcaacggattgaccaatcgagttacttcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="77104" stop="79252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77400" g_stop="77674" g_length="275"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="275" r_length="275" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78456" g_stop="78952" g_length="497"/>
          <reference_exon_boundary r_type="cDNA" r_start="276" r_stop="772" r_length="497" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E698798" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>772</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E698798" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77400" e_stop="77674"/>
          <exon e_start="78456" e_stop="78952"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCA</genome_strand>
        <mrna_strand>TTAATAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCTTTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E202202" ref_strand="+" ref_description="SGN-E202202 [cLEC-7-D24]">
      <seq>aagctcttgtgttttatgtgggtaaagctccaaaaggatccaagacgaattggattatgcatgaatatagactttttgaatcttcaaggaaaaataatggaagttcaaagctagatgaatgggtgctttgtcgaatttataagaagaattcaagtggaccaaaacctctgatgtctggtttacacagcagtaatgaatacagccatggttcgtcgacttcgtcatcatcccaattcgatgatatgctcgaatcattaccagaaatggacgatcgattctccaatttaccgaggttgaactctctcaaggccgagaaattcaacctcgatcgtctggattcagccaatttcgattgggcaattctcgctgggctcaaaccaatgccggaattgggcccaccaaatcaagctccacgcgttcagggtcaggctcaggggcatgtcaataaccacattcacagcgacaacaacaatatgaattttctcaacgatgtttacgcccat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="77265" stop="79148"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77565" g_stop="77674" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="78456" g_stop="78848" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="503" r_length="393" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E202202" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E202202" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77565" e_stop="77674"/>
          <exon e_start="78456" e_stop="78848"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAGGTAATTTCATTGAAATATTATTCTCTCTATATTTTTGTTTTTGGATGAATATTTGCACTTTTAGTCCCTCAATTTCCATAAATTTATGCATTTAGTCCTTGATTAATTGAAATGTGTATTTAATTACCAAGTCCTTCCGTTGAGAGTATTTTATCCTTAACAAAAAAATTATGTTTGAGCTCCGAGTACAGAGAAATTCTGTCAGGAATGAGCCTTGTAGTGCGCAATTGGGATATTGTGAGTATCGGGGATTCAGAAATAATAAGCCCTATGTTTTTAAGCGTGTCAAAGATGTTCCACCACGAACTTTTTATCGTTCTATTAATGAATCGATTTAATTTTCCAGCTCAGTCAAGCAATGTTACATAAATTAGGAATTACTACTTATATTTTGAAGATGTTCCACTCCGAACTTTTTATTGTTTTATTAATGAATCGATTTAATTTTCCAGCTCGGTCAATCAATGTCACATAAATTAGAAATTACTACTATATTTTGTTATAATAGTTATACTATATGATGAATTTGTATTTGGTGTGCTCCATATGTTGATGGTAATGTGCTTTATCAACAGCCTGTTCTTTTGTATATAGAGAGACCAAAGAGCGTACATTTTAGTGATTGGAGGTCAAAATGTGCTATAGTTAAATAGTATAAGGGCTAAAGTCTAAATTGTCAATAACTGGAGGAGTAAATGTGCAATTATATTCCATTTTCAAATGTGTAATTGTTGCATTTCTTAATGTGTATCTAATTTTTCGTCATTTTTGTACATTTCAGCTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCAT</genome_strand>
        <mrna_strand>AAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCACCAAATCAAGCTCCACGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E238332" ref_strand="+" ref_description="SGN-E238332 [cLED-17-A6]">
      <seq>caatttcgattgggcaattctcgctgggctcaaaccaatgccggaattgggcccagcaaatcaagctccaggcgttcagggtcaggctcaggggcatgtcaataaccacattcacagcgacaacaacaatatgaattttctcaacgatgtttacgcccatcctccaaatttccgaggcaacacaaaggttgaaagtattaatctagacgaagaagttgaaagcgggaaaagaaatcaacggattgaccaatcgagttacttccaacagagtctcaatggattttcccaagcgtatacaaacaatgtggatcaattcgggatccaatgtccgaatcagacgttaaatctcgggttcaagcagtagaggatactggaaagtaagaaaagttgtagctcgaaatctgaatgccagtatactgtgtatatatacagaaggcctggatttagatttccttggcccaacggattcgaagaaagagcaagtacagtatcatgccaaggaaattaagtccttcgagggcacgtctgggcagacgtcgtggacgttatttgcaagttcttgcaattgtgtctgaagtcattaggctgagtggcacttcttatttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="78389" stop="79595"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78689" g_stop="79295" g_length="607"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E238332" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>607</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E238332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78689" e_stop="79295"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGC</genome_strand>
        <mrna_strand>CAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E243464" ref_strand="+" ref_description="SGN-E243464 [cLED-34-B13]">
      <seq>caatttcgattgggcaattctcgctgggctcaaaccaatgccggaattgggcccagcaaatcaagctccaggcgttcagggtcaggctcaggggcatgtcaataaccacattcacagcgacaacaacaatatgaattttctcaacgatgtttacgcccatcctccaaatttccgaggcaacacaaaggttgaaagtattaatctagacgaagaagttgaaagcgggaaaagaaatcaacggattgaccaatcgagttacttccaacagagtctcaatggattttcccaagcgtatacaaacaatgtggatcaattcgggatccaatgtccgaatcagacgttaaatctcgggttcaagcagtagaggatactggaaagtaagaaaagttgtagctcgaaatctgaatgccagtatactgtgtatatatacagaaggcctggatttagatttccttggcccaacggattcgaagaaagagcaagtacagtatcatgccaaggaaattaagtccttcgagggcacgtctgggcagacgtcgtggacgttatttgcaagttcttgcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="78389" stop="79553"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78689" g_stop="79253" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="565" r_length="565" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E243464" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>565</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243464" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78689" e_stop="79253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAA</genome_strand>
        <mrna_strand>CAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E239663" ref_strand="+" ref_description="SGN-E239663 [cLED-33-I11]">
      <seq>caatttcgattgggcaattctcgctgggctcaaaccaatgccggaattgggcccagcaaatcaagctccaggcgttcagggtcaggctcaggggcatgtcaataaccacattcacagcgacaacaacaatatgaattttctcaacgatgtttacgcccatcctccaaatttccgaggcaacacaaaggttgaaagtattaatctagacgaagaagttgaaagcgggaaaagaaatcaacggattgaccaatcgagttacttccaacagagtctcaatggattttcccaagcgtatacaaacaatgtggatcaattcgggatccaatgtgcgaatcagacgttaaatctcgggttcaagcagtagaggatactggaaagtaagaaaagttgtagctcgaaatctgaatgccagtatactgtgtatatatacagaaggcctggatttagatttccttggcccaacgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="78389" stop="79454"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78689" g_stop="79154" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E239663" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E239663" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78689" e_stop="79154"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGA</genome_strand>
        <mrna_strand>CAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTGCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E716630" ref_strand="+" ref_description="SGN-E716630 [FB17CD11]">
      <seq>gtcaggctcaggggcatgtcaataaccacattcacagcgacaacaacaatatgaattttctcaacgatgtttacgcccatcctccaaatttccgaggcaacacaaaggttgaaagtattaatctagacgaagaagttgaaagcgggaaaagaaatcaacggattgaccaatcgagttacttccaacagagtctcaatggattttcccaagcgtatacaaacaatgtggatcaattcgggatccaatgtccgaatcagacgttaaatctcgggttcaggcagtagaggatactggaaagtaagaaaagttgtagctcgaaatctgaatgccagtatactgtgtatatatacagaaggcctggatttagatttccttggcccaacggattcgaagaaagagcaagtacagtatcatgccaaggaaattaagtccttcgagggcacgtctgggcagacgtcgtggacgttatttgcaagttcttgcaattgtgtctgaagtcattaggctgagtggcacttcttatttgcaagttgtgtttgaagtcattaggccgaaggcacgtctgcgtggacgataaaataatgtacacaaacaggagatatatgcaggggcgtgtatattcttttaggaaactgggcttttagtttgttttattttatgatacatttccagatttggatgtattttgtaatttttacatttctgtgtagcaagttagaagatatatagaaagatacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="78469" stop="79808"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78769" g_stop="79508" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E716630" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E716630" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78769" e_stop="79508"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATTTTTACATTTCTGTGTAGCAAGTTAGAAGATATATAGAAAGATACTTT</genome_strand>
        <mrna_strand>GTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAGGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATTTTTACATTTCTGTGTAGCAAGTTAGAAGATATATAGAAAGATACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E249170" ref_strand="+" ref_description="SGN-E249170 [cLEF-50-I23]">
      <seq>ttttttttttaaaagtatctttctatatatcttctaacttgctacacagaaatgtaaaaattacaaaatacatccaaatctggaaatgtatcataaaataaaacaaactaaaagcccagtttcctaaaagaatatacacgcccctgcatatatctcctgtttgtgtacattattttatcgtccacgcagacgtgccttcggcctaatgacttcaaacacaacttgcaaataagaagtgccactcagcctaatgacttcagacacaattgcaagaacttgcaaataacgtccacgacgtctgcccagacgtgccctcgaaggacttaatttccttggcatgatactgtacttgctctttcttcgaatccgttgggccaaggaaatctaaatccaggccttctgtatatatacacagtatactggcattcagatttcgagctacaacttttcttactttccagtatcctctactgcttgaacccgagatttaacgtctgattcggacattggatcccgaattgatccacattgtttgtatacgcttgggaaaatccattgagactctgttggaagtaactcgattggtcaatccgttgatttcttttcccgctttcaacttcttcgtctagattaatactttcaacctttgtgttgcctcggaaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79815" stop="78554"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79519" g_stop="78854" g_length="666"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="666" r_length="666" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E249170" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E249170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79519" e_stop="78854"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTATTTTAAAAGTATCTTTCTATATATCTTCTAACTTGCTACACAGAAATGTAAAAATTACAAAATACATCCAAATCTGGAAATGTATCATAAAATAAAACAAACTAAAAGCCCAGTTTCCTAAAAGAATATACACGCCCCTGCATATATCTCCTGTTTGTGTACATTATTTTATCGTCCACGCAGACGTGCCTTCGGCCTAATGACTTCAAACACAACTTGCAAATAAGAAGTGCCACTCAGCCTAATGACTTCAGACACAATTGCAAGAACTTGCAAATAACGTCCACGACGTCTGCCCAGACGTGCCCTCGAAGGACTTAATTTCCTTGGCATGATACTGTACTTGCTCTTTCTTCGAATCCGTTGGGCCAAGGAAATCTAAATCCAGGCCTTCTGTATATATACACAGTATACTGGCATTCAGATTTCGAGCTACAACTTTTCTTACTTTCCAGTATCCTCTACTGCTTGAACCCGAGATTTAACGTCTGATTCGGACATTGGATCCCGAATTGATCCACATTGTTTGTATACGCTTGGGAAAATCCATTGAGACTCTGTTGGAAGTAACTCGATTGGTCAATCCGTTGATTTCTTTTCCCGCTTTCAACTTCTTCGTCTAGATTAATACTTTCAACCTTTGTGTTGCCTCGGAAATTT</genome_strand>
        <mrna_strand>TTTTTTTTTTAAAAGTATCTTTCTATATATCTTCTAACTTGCTACACAGAAATGTAAAAATTACAAAATACATCCAAATCTGGAAATGTATCATAAAATAAAACAAACTAAAAGCCCAGTTTCCTAAAAGAATATACACGCCCCTGCATATATCTCCTGTTTGTGTACATTATTTTATCGTCCACGCAGACGTGCCTTCGGCCTAATGACTTCAAACACAACTTGCAAATAAGAAGTGCCACTCAGCCTAATGACTTCAGACACAATTGCAAGAACTTGCAAATAACGTCCACGACGTCTGCCCAGACGTGCCCTCGAAGGACTTAATTTCCTTGGCATGATACTGTACTTGCTCTTTCTTCGAATCCGTTGGGCCAAGGAAATCTAAATCCAGGCCTTCTGTATATATACACAGTATACTGGCATTCAGATTTCGAGCTACAACTTTTCTTACTTTCCAGTATCCTCTACTGCTTGAACCCGAGATTTAACGTCTGATTCGGACATTGGATCCCGAATTGATCCACATTGTTTGTATACGCTTGGGAAAATCCATTGAGACTCTGTTGGAAGTAACTCGATTGGTCAATCCGTTGATTTCTTTTCCCGCTTTCAACTTCTTCGTCTAGATTAATACTTTCAACCTTTGTGTTGCCTCGGAAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E298565" ref_strand="+" ref_description="SGN-E298565 [cLET-41-P3]">
      <seq>acggattgaccaatcgagttacttccaacagagtctcaatggattttcccaagcgtatacaaacaatgtggatcaattcgggatccaatgtccgaatcagacgttaaatctcgggttcaggcagtagaggatactggaaagtaagaaaagttgtagctcgaaatctgaatgccagtatactgtgtatatatacagaaggcctggatttagatttccttggcccaacggattcgaagaaagagcaagtacagtatcatgccaaggaaattaagtccttcgagggcacgtctgggcagacgtcgtggacgttatttgcaagttcttgcaattgtgtctgaagtcattaggctgagtggcacttcttatttgcaagttgtgtttgaagtcattaggccgaaagcacgtctgcgtggacgataaaataatgtacacaaacaggagatatatgcaggggcgtgtatattcttttaggaaactgggcttttagtttgttttattttatgatacatttccagatttggatgtattttgtaatttttacatttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="78626" stop="79772"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="78926" g_stop="79472" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E298565" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E298565" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="78926" e_stop="79472"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATTTTTACATTTCT</genome_strand>
        <mrna_strand>ACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAGGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAAGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATTTTTACATTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E394914" ref_strand="+" ref_description="SGN-E394914 [TUS-43-G17]">
      <seq>ttttttttttattttaaaagtatctttctatatatcttctaacttgctacacagaaatgtattaattacaaaatacatccaaatctggaaatgtatcataaaataaaacaaactaaaagcccagtttcctaaaagaatatacacgccacctgcatatatctcctagtttgtgtacattattttatcgtccacgcagacgtgccttcggcctaatgacttcaaacacaacttgcaaataataagtgccactcagcctaatgacttcagacacaattgcaagaacttgcaaataacgtccacgacgtctgcccagacgtgccctcgaaggacttaatttccttggcatgatactgtacttgctctttcttcgaatccgttgggccaaggaaatctaaatccaggccttctgtaatatacccagtatactggcattcagatttcgagctacaacttttcttactttccagtagcgggggggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79815" stop="78755"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79524" g_stop="79060" g_length="465"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="466" r_length="466" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E394914" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>465</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E394914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79524" e_stop="79060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAAAAGTATTTTAAAAGTATCTTTCTATATATCTTCTAACTTGCTACACAGAAATGTAAAAATTACAAAATACATCCAAATCTGGAAATGTATCATAAAATAAAACAAACTAAAAGCCCAGTTTCCTAAAAGAATATACACGCC-CCTGCATATATCTCCT-GTTTGTGTACATTATTTTATCGTCCACGCAGACGTGCCTTCGGCCTAATGACTTCAAACACAACTTGCAAATAAGAAGTGCCACTCAGCCTAATGACTTCAGACACAATTGCAAGAACTTGCAAATAACGTCCACGACGTCTGCCCAGACGTGCCCTCGAAGGACTTAATTTCCTTGGCATGATACTGTACTTGCTCTTTCTTCGAATCCGTTGGGCCAAGGAAATCTAAATCCAGGCCTTCTGTATATATACACAGTATACTGGCATTCAGATTTCGAGCTACAACTTTTCTTACTTTCCA</genome_strand>
        <mrna_strand>TTTTTTTTTTATTTTAAAAGTATCTTTCTATATATCTTCTAACTTGCTACACAGAAATGTATTAATTACAAAATACATCCAAATCTGGAAATGTATCATAAAATAAAACAAACTAAAAGCCCAGTTTCCTAAAAGAATATACACGCCACCTGCATATATCTCCTAGTTTGTGTACATTATTTTATCGTCCACGCAGACGTGCCTTCGGCCTAATGACTTCAAACACAACTTGCAAATAATAAGTGCCACTCAGCCTAATGACTTCAGACACAATTGCAAGAACTTGCAAATAACGTCCACGACGTCTGCCCAGACGTGCCCTCGAAGGACTTAATTTCCTTGGCATGATACTGTACTTGCTCTTTCTTCGAATCCGTTGGGCCAAGGAAATCTAAATCCAGGCCTTCTGTA-ATATACCCAGTATACTGGCATTCAGATTTCGAGCTACAACTTTTCTTACTTTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E375265" ref_strand="+" ref_description="SGN-E375265 [TUS-34-L5]">
      <seq>ttttttttttattttaaaagtatctttctatatatcttctaacttgctacacagaaatgtaaaaattacaaaatacatccaaatctggaaatgtatcataaaataaaacaaactaaaagcccagtttcctaaaagaatatacacgcccctgcatatatctcctgtttgtgtacattattttatcgtccacgcagacgtgccttcggcctaatgacttcaaacacaacttgcaaataagaagtgccactcagcctaatgacttcagacacaattgcaagaacttgcaaataacgtccacgacgtctgcccagacgtgccctcgaaggacttaatttccttggcatgatactgtacttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79815" stop="78867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79524" g_stop="79167" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E375265" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E375265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79524" e_stop="79167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAAAAGTATTTTAAAAGTATCTTTCTATATATCTTCTAACTTGCTACACAGAAATGTAAAAATTACAAAATACATCCAAATCTGGAAATGTATCATAAAATAAAACAAACTAAAAGCCCAGTTTCCTAAAAGAATATACACGCCCCTGCATATATCTCCTGTTTGTGTACATTATTTTATCGTCCACGCAGACGTGCCTTCGGCCTAATGACTTCAAACACAACTTGCAAATAAGAAGTGCCACTCAGCCTAATGACTTCAGACACAATTGCAAGAACTTGCAAATAACGTCCACGACGTCTGCCCAGACGTGCCCTCGAAGGACTTAATTTCCTTGGCATGATACTGTACTTGC</genome_strand>
        <mrna_strand>TTTTTTTTTTATTTTAAAAGTATCTTTCTATATATCTTCTAACTTGCTACACAGAAATGTAAAAATTACAAAATACATCCAAATCTGGAAATGTATCATAAAATAAAACAAACTAAAAGCCCAGTTTCCTAAAAGAATATACACGCCCCTGCATATATCTCCTGTTTGTGTACATTATTTTATCGTCCACGCAGACGTGCCTTCGGCCTAATGACTTCAAACACAACTTGCAAATAAGAAGTGCCACTCAGCCTAATGACTTCAGACACAATTGCAAGAACTTGCAAATAACGTCCACGACGTCTGCCCAGACGTGCCCTCGAAGGACTTAATTTCCTTGGCATGATACTGTACTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E539761" ref_strand="+" ref_description="SGN-E539761 [TUS-59-K24]">
      <seq>tacgtcagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggccaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggttgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgctatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagccttcggggagaaagattattacttgcaaatgggttttcaagaagaaggaagggatatcaccagcagaaggagtcaagtataaagtcagggttgttgctagaggtttcaaccaaagagagggagtggactacaatgagatcttctcaccagtggtcagacatacttccatccgagtgttactagcgatagttgcacatcagaatctggagcttgaaacacttgatgtgaagacagcgtttctacatggagagttggaggaagagatatacatgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="83285" stop="84533"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83585" g_stop="84233" g_length="649"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="649" r_length="649" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E539761" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539761" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83585" e_stop="84233"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTCCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACGAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</genome_strand>
        <mrna_strand>TACGTCAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGTCAGGGTTGTTGCTAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACCAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAAACACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E284788" ref_strand="+" ref_description="SGN-E284788 [cLES-3-F2]">
      <seq>acgttagaaactaggagtcttgacaaacaggtggagtttcaagtcattcagaacgagagcgatttaaaggaacctgaagaggaggatcaagagccacagactgaaactgatattccagaatctatgccatcagatatccatcagagtatagctcaagatcggtcaaggagggttggagttcggccacctacgaggtatggttttgaggacatggtgggttatgcactgcaggctgctgaagaggtagatacatctgagccgtctacttacaaagaagccattttaagttctgattctgaaaaatggtttgccgatatgggagatgagatggagtccctacacaagaatcagacatgggatctggtcatacagtcttcggggagaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="83286" stop="84270"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83586" g_stop="83970" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E284788" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>385</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E284788" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83586" e_stop="83970"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTCCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAA</genome_strand>
        <mrna_strand>ACGTTAGAAACTAGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACTGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGTCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGCTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTTCTGATTCTGAAAAATGGTTTGCCGATATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGTCTTCGGGGAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E343338" ref_strand="+" ref_description="SGN-E343338 [cTOF-17-N22]">
      <seq>gtttccaagttccagggaaggaaaatcacgtctgcaagttgaagaagtccttatatggacttaagcagtctccaaggcagtggtataaaaggtttgacagctatatggtgaagttgggctatactcggagctcatatgattgttgtgtctactacaataggctcaatgatgattcattcatctatctggtgctttatgtagatgatatgttgatagctgcaaagaagaagtatgacattcagaagctgaagggtttacttagtgctgagtttgagatgaaggatctgggagccgctcggaagattttagggatggagatcattagagacagagagagaaggaaacttttcttgtcacagagaagctacattcagaaggtcttggcgaggtttggcatgtcttcatctaagcccattgatacccccagtgctgccaatatccatctcactgccatgttcgctccacagtcagaagaagagaaggagtatatgtcacgagtcccttatgccagtgccgtaagaagtttgatgtatgctatggtctgtacaaggccagatttagcacatgcagtcagtgtagtgagcagattcatgggacaaccagggagagaacattggcaggctgtgaagagaattttccggtaccttagaggtacatctgacgttggtctcatttatggaggtgatactcagtgcttggttactggctattctgattcagactatgctggagatgttgacacaagaagatcgatgactggctatgtgtttaccctgggaggatctgtcgtcagttggaaggcaacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="83944" stop="85351"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84244" g_stop="85051" g_length="808"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="808" r_length="808" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E343338" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E343338" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84244" e_stop="85051"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGACAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGACATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGTCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTTCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</genome_strand>
        <mrna_strand>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGGCAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGGCATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAAGAAGTTTGATGTATGCTATGGTCTGTACAAGGCCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTCCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTGGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E713264" ref_strand="+" ref_description="SGN-E713264 [FB08AF11]">
      <seq>actacaaaaaaaataaaaatgacagatttcaacttcgacagtacttgtacttctccatatataagtgcaccttcaagtcctcaacattttggtacaacattcttttttagtgctcctactagccctactcgtatctccgctcttcacagcgaatctaacgttgctgatcatgatcatgataacgataatgatgattttgcttttgaatttagcggatatgaaataatggagaaaagtacaatagcagctgacgagttatttgatggcgggaaaatcaaattaaagcaagtaatggtacctattgattcgccgaaaatgaaaaaaaacgacaaagatagtgtaaattctgaaccaaattcttctatgagagtatcgggtgttttgttaatcaatgaaaatgcggagaaaacagagtcctctgtttcgtcgttatggaaaagaagatggaaattgaaagatttattgttgtttagaagtgcttctgagagtcgagctagtagtaatacgatagagatgagtaagtatgcgttggtgaagaaagttcgtgaagaggaggggtcgagctcgagcttgaggataaggaagatggaatcgaattcggctcatgaattgcattataagatgaagaaggaggtgttgaaagatatgaagaagaaaacatttttaccatataagcaaagtgttcttagttggcatggttgttatggtcttgatgaaacaattacaatgtatatttctcctcgttcgtagtttattgtatgattattatcatgtttgattgtatatttatttgatattatacatttcgcttccgtgcaggatttgaacttgatgagtttaatttctgaatttaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="89014" stop="87561"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88714" g_stop="87861" g_length="854"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="854" r_length="854" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E713264" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>854</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713264" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88714" e_stop="87861"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTACAAAAAAAATAAAAATGACAGATTTCAACTTCGACAGTACTTGTACTTCTCCATATATAAGTGCACCTTCAAGTCCTCAACATTTTGGTACAACATTCTTTTTTAGTGCTCCTACTAGCCCTACTCGTATCTCCGCTCTTCACAGCGAATCTAACGTTGCTGATCATGATCATGATAACGATAATGATGATTTTGCTTTTGAATTTAGCGGATATGAAATAATGGAGAAAAGTACAATAGCAGCTGACGAGTTATTTGATGGCGGGAAAATCAAATTAAAGCAAGTAATGGTACCTATTGATTCGCCGAAAATGAAAAAAAACGACAAAGATAGTGTAAATTCTGAACCAAATTCTTCTATGAGAGTATCGGGTGTTTTGTTAATCAATGAAAATGCGGAGAAAACAGAGTCCTCTGTTTCGTCGTTATGGAAAAGAAGATGGAAATTGAAAGATTTATTGTTGTTTAGAAGTGCTTCTGAGAGTCGAGCTAGTAGTAATACGATAGAGATGAGTAAGTATGCGTTGGTGAAGAAAGTTCGTGAAGAGGAGGGGTCGAGCTCGAGCTTGAGGATAAGGAAGATGGAATCGAATTCGGCTCATGAATTGCATTATAAGATGAAGAAGGAGGTGTTGAAAGATATGAAGAAGAAAACATTTTTACCATATAAGCAAAGTGTTCTTAGTTGGCATGGTTGTTATGGTCTTGATGATACAATTACAATGTATATTTCTCCTCGTTCGTAGTTTATTGTATGATTATTATCATGTTTGATTGTATATTTATTTGATATTATACATTTCGCTTCCGTGCAGGATTTGAACTTGATGAGTTTAATTTCTGAATTTAA</genome_strand>
        <mrna_strand>ACTACAAAAAAAATAAAAATGACAGATTTCAACTTCGACAGTACTTGTACTTCTCCATATATAAGTGCACCTTCAAGTCCTCAACATTTTGGTACAACATTCTTTTTTAGTGCTCCTACTAGCCCTACTCGTATCTCCGCTCTTCACAGCGAATCTAACGTTGCTGATCATGATCATGATAACGATAATGATGATTTTGCTTTTGAATTTAGCGGATATGAAATAATGGAGAAAAGTACAATAGCAGCTGACGAGTTATTTGATGGCGGGAAAATCAAATTAAAGCAAGTAATGGTACCTATTGATTCGCCGAAAATGAAAAAAAACGACAAAGATAGTGTAAATTCTGAACCAAATTCTTCTATGAGAGTATCGGGTGTTTTGTTAATCAATGAAAATGCGGAGAAAACAGAGTCCTCTGTTTCGTCGTTATGGAAAAGAAGATGGAAATTGAAAGATTTATTGTTGTTTAGAAGTGCTTCTGAGAGTCGAGCTAGTAGTAATACGATAGAGATGAGTAAGTATGCGTTGGTGAAGAAAGTTCGTGAAGAGGAGGGGTCGAGCTCGAGCTTGAGGATAAGGAAGATGGAATCGAATTCGGCTCATGAATTGCATTATAAGATGAAGAAGGAGGTGTTGAAAGATATGAAGAAGAAAACATTTTTACCATATAAGCAAAGTGTTCTTAGTTGGCATGGTTGTTATGGTCTTGATGAAACAATTACAATGTATATTTCTCCTCGTTCGTAGTTTATTGTATGATTATTATCATGTTTGATTGTATATTTATTTGATATTATACATTTCGCTTCCGTGCAGGATTTGAACTTGATGAGTTTAATTTCTGAATTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E474393" ref_strand="+" ref_description="SGN-E474393 [cSTB-36-I22]">
      <seq>gtcacaagctcctaattccacagtttcggaagtcatgactaatccggatgctacttcttcctcggattgttctgatgaaccaaagattttgacagtgccatgttctgaagtctctcctccgtcggagcagaatctgcaacaagtgaattgggccttgtttcatgaagtatctgatttttttaagcatattgccagtgaaaatgatggaactacctcaactgtcgctcagaagatgaaggaggaaataaatatgcacataaagttcttgactgctgccattactctgcctgagctgaagaagcctgacactggtgaggacatggctgaggaagtgcaaagtatgcttcaggagctccaacagctccattcatttttggatatgagtaatttggaagtagcaaaagctgaacaactattgaagagcttgctgtcaagaaagcccaagattgaagctttattgaaccaatgcattgtaccaacagagaaggaaaaaggcaatacagtgtgtgttgatgatgagaagattgtgttgccgtctgtgactgccaccgattccgaaagcagtaacaaggctactgaaatcgggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="94646" stop="92482"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94346" g_stop="94109" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94108" i_stop="93699" i_length="410">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.923" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93698" g_stop="93553" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="384" r_length="146" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93552" i_stop="92985" i_length="568">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92984" g_stop="92816" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="538" r_length="154" r_score="0.834"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E474393" ref_strand="+">
        <total_alignment_score>0.908</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.942" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474393" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94346" e_stop="94109"/>
          <exon e_start="93698" e_stop="93553"/>
          <exon e_start="92984" e_stop="92816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCACAAGCTCCTAATTCCACAGTTTCGGAAGTCATGACTAATCCGGATGCTACTTCTTCCTCGGATTGTTCTGACCAACCAAAGATTTTAACTGTCTCATGTTCTGAAGTCTCTCCTCCGTCCGAGCAGAATCTGCAACAAGTTAATTGGGACTTGTTTAAAGAAGTATCTGATTTTTTGAAGCTTATTGGCAGTGAAAACGATGGAACCACCTCGACTGTCGCTCAGAAGATAAAGGTAATCCTATCTCTTCTAATTATAACTTGTAAAGGTGTCTGCTAGGTGTGGAATGAATTATTACAGTACTATTAGGAATAATACATAAATAGACACTCAACCTGGCCTTAAATGGCAAGTGAAGAACTCCAACTTCGAGAGTGTACATCTAAACACCTCAACTCAAACTTGATTCCACTATGTCAGTTAAACAATCAACTTACAAAATGATAATCTACATGTGCATCTCCAAAATTTATGTGTCACGTCAGTGTCAGGTGTCCATGAGACGTCGTGGGAAAGAGTTGGAATGTTAACTTGTTAGTTTGGACTTGTGACTGAGTTAAGGTCTCTAAACGTGGCAGAGGTCAAGTTTGAGTGTCTGTTTATAAAATATTATTATTAAGGCACTAAACTTATTGTTCTTTTAGGAGGAAATAAATATGCACATAAAGTTTTTGACTGCTGCCATTACTCTGCCTGAGCTGAAGAAGCCTGACGCTGGCGAGGACATGGCTGAGGAAGTGCAAAGTATGCTTCAGGAGCTGCAACAGCTCCATTCATTTTTGGATACGAGGTATGATGCTTTCGTACCATACTTTTTATTAGTTAATGATATTCTCAAAATGCCCCAACACTTGCGGGCCTGATTCTTTTTTTATGGGTCAAGCACGTGGAAATTCTTTTTAGTTTGCTTGGCACGGTGATTCGATCTCAAGATCTCTGCATACTCTGATACCATGTTGTAGTGTGTGACCATCTCATCTAAAATCTTAAGCTAATAGAGAGAGCACACTTTTTATTAGTTAATGATATTTTCAGCAGTACACTCCCAAAATTGTTTAGGACGTTCAAAATATTATCTATTCTTGATGTAACTAATCCTTTCTTGAGCCTCTCTATTATAGTAACGTCCCATTGGAAACATCTCTACCGCCACAAGGTAGGGGCAAGACTGCATACGTACCACCGTCCATAGACCCCACTTGTGTGATTACATTGATATGTCATTGTTGTTATCCTATTAACAAATGTTTTGTTTCAACTACTTCTTGCATAGCACATACTTCTTGGTAGTTCAGCTCGTCGTCATGCTTTCTCTTTTTTTTTTGGAATAAAAACTCTTGATGAATGTTGCTATACAGTAATTTGGAAGTAGCAAAAGGTGAACAACTATTGAAGAGCTTGTTGTCAAGAAAGTCCAAGATTGAAGCTTTATTGAGTCAATGTATTGTATCAACAACATTGAAGGATTCATGTGAGGAACAAGGTAATGCAGTGTGTGTTGAAGATGAAAAGATTGAGTCACCGTCT</genome_strand>
        <mrna_strand>GTCACAAGCTCCTAATTCCACAGTTTCGGAAGTCATGACTAATCCGGATGCTACTTCTTCCTCGGATTGTTCTGATGAACCAAAGATTTTGACAGTGCCATGTTCTGAAGTCTCTCCTCCGTCGGAGCAGAATCTGCAACAAGTGAATTGGGCCTTGTTTCATGAAGTATCTGATTTTTTTAAGCATATTGCCAGTGAAAATGATGGAACTACCTCAACTGTCGCTCAGAAGATGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAATAAATATGCACATAAAGTTCTTGACTGCTGCCATTACTCTGCCTGAGCTGAAGAAGCCTGACACTGGTGAGGACATGGCTGAGGAAGTGCAAAGTATGCTTCAGGAGCTCCAACAGCTCCATTCATTTTTGGATATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTGGAAGTAGCAAAAGCTGAACAACTATTGAAGAGCTTGCTGTCAAGAAAGCCCAAGATTGAAGCTTTATTGAACCAATGCATTGTA-C--CAACA--G-A-GA---A-G-GA--AA-AAGGCAATACAGTGTGTGTTGATGATGAGAAGATTGTGTTGCCGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E414745" ref_strand="+" ref_description="SGN-E414745 [STM-20-G7]">
      <seq>gtcacaagctcctaattcccagtttcggaagtcatgactaatccggatgctacttcttcctcggattgttctgatgaaccaaagattttgacagtgccatgttctgaagtctctcctccgtcggagcagaatctgcaacaagtgaattgggccttgtttcatgaagtatctgatttttttaagcatattgccagtgaaaatgatggaactacctcaactgtcgctcagaagatgaaggaggaaataaatatgcacataaagttcttgactgctgccattactctgcctgagctgaagaagcctgacactggtgaggacatggctgaggaagtgcaaagtatgcttcaggagctccaacagctccattcatttttggatatgagtaatttggaagtagcaaaagctgaacaactattgaagagcttgctgtcaaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="94646" stop="92633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="94346" g_stop="94109" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="94108" i_stop="93699" i_length="410">
            <donor d_prob="1.000" d_score="0.90"/>
            <acceptor a_prob="0.923" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93698" g_stop="93553" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="383" r_length="146" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93552" i_stop="92985" i_length="568">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.986" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92984" g_stop="92933" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="384" r_stop="435" r_length="52" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E414745" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E414745" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="94346" e_stop="94109"/>
          <exon e_start="93698" e_stop="93553"/>
          <exon e_start="92984" e_stop="92933"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCACAAGCTCCTAATTCCACAGTTTCGGAAGTCATGACTAATCCGGATGCTACTTCTTCCTCGGATTGTTCTGACCAACCAAAGATTTTAACTGTCTCATGTTCTGAAGTCTCTCCTCCGTCCGAGCAGAATCTGCAACAAGTTAATTGGGACTTGTTTAAAGAAGTATCTGATTTTTTGAAGCTTATTGGCAGTGAAAACGATGGAACCACCTCGACTGTCGCTCAGAAGATAAAGGTAATCCTATCTCTTCTAATTATAACTTGTAAAGGTGTCTGCTAGGTGTGGAATGAATTATTACAGTACTATTAGGAATAATACATAAATAGACACTCAACCTGGCCTTAAATGGCAAGTGAAGAACTCCAACTTCGAGAGTGTACATCTAAACACCTCAACTCAAACTTGATTCCACTATGTCAGTTAAACAATCAACTTACAAAATGATAATCTACATGTGCATCTCCAAAATTTATGTGTCACGTCAGTGTCAGGTGTCCATGAGACGTCGTGGGAAAGAGTTGGAATGTTAACTTGTTAGTTTGGACTTGTGACTGAGTTAAGGTCTCTAAACGTGGCAGAGGTCAAGTTTGAGTGTCTGTTTATAAAATATTATTATTAAGGCACTAAACTTATTGTTCTTTTAGGAGGAAATAAATATGCACATAAAGTTTTTGACTGCTGCCATTACTCTGCCTGAGCTGAAGAAGCCTGACGCTGGCGAGGACATGGCTGAGGAAGTGCAAAGTATGCTTCAGGAGCTGCAACAGCTCCATTCATTTTTGGATACGAGGTATGATGCTTTCGTACCATACTTTTTATTAGTTAATGATATTCTCAAAATGCCCCAACACTTGCGGGCCTGATTCTTTTTTTATGGGTCAAGCACGTGGAAATTCTTTTTAGTTTGCTTGGCACGGTGATTCGATCTCAAGATCTCTGCATACTCTGATACCATGTTGTAGTGTGTGACCATCTCATCTAAAATCTTAAGCTAATAGAGAGAGCACACTTTTTATTAGTTAATGATATTTTCAGCAGTACACTCCCAAAATTGTTTAGGACGTTCAAAATATTATCTATTCTTGATGTAACTAATCCTTTCTTGAGCCTCTCTATTATAGTAACGTCCCATTGGAAACATCTCTACCGCCACAAGGTAGGGGCAAGACTGCATACGTACCACCGTCCATAGACCCCACTTGTGTGATTACATTGATATGTCATTGTTGTTATCCTATTAACAAATGTTTTGTTTCAACTACTTCTTGCATAGCACATACTTCTTGGTAGTTCAGCTCGTCGTCATGCTTTCTCTTTTTTTTTTGGAATAAAAACTCTTGATGAATGTTGCTATACAGTAATTTGGAAGTAGCAAAAGGTGAACAACTATTGAAGAGCTTGTTGTCAAGA</genome_strand>
        <mrna_strand>GTCACAAGCTCCTAATTCC-CAGTTTCGGAAGTCATGACTAATCCGGATGCTACTTCTTCCTCGGATTGTTCTGATGAACCAAAGATTTTGACAGTGCCATGTTCTGAAGTCTCTCCTCCGTCGGAGCAGAATCTGCAACAAGTGAATTGGGCCTTGTTTCATGAAGTATCTGATTTTTTTAAGCATATTGCCAGTGAAAATGATGGAACTACCTCAACTGTCGCTCAGAAGATGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................GAGGAAATAAATATGCACATAAAGTTCTTGACTGCTGCCATTACTCTGCCTGAGCTGAAGAAGCCTGACACTGGTGAGGACATGGCTGAGGAAGTGCAAAGTATGCTTCAGGAGCTCCAACAGCTCCATTCATTTTTGGATATGAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TAATTTGGAAGTAGCAAAAGCTGAACAACTATTGAAGAGCTTGCTGTCAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E348076" ref_strand="+" ref_description="SGN-E348076 [cTOF-31-J19]">
      <seq>ttccgtccagtagctccttcactcaatagtcttgcgttgtttggaaaaaaactcgaacaagaacatcaacatggaggttgatctccgttcaaatgaaaccaatatcactgcaaagtcaccacttgttagcagaaacaacaagccagaaaagaaaagtgttaagtttccagcatcaccaagatttcaacgaagagattcatcaccacacgttacaagacgagtagtgagaacagcagcaacaagtcattacagtctacgaaaacttcacggatcagctaacaaagagatcataaagagagcactaacaccaccagctcgtcgaccaactttgagatggttggatttcaaaccaactccaagtcgactttgtaatatgtctgcagcatagttgtagctacttgaatgtacaaaagatgtaacaatttttttttatttgtttactctatattatcatcaagaatcaaacattttcatttgttctgttttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="131026" stop="132118"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="131326" g_stop="131821" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E348076" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348076" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="131326" e_stop="131821"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCCGTCCAGTAGCTCCTTCACTCAATAGTCTTGCGTTGTTTGGAAAAAAACTCGAACAAGAACATCAACATGGAGGTTGATCTCCGTTCAAATGAAACCAATATCACTGCAAAGTCACCACTTGTTAGCAGAAACAACAAGCCAGAAAAGAAAAGTGTTAAGTTTCCAGCATCACCAAGATTTCAACGAAGAGATTCATCACCACACGTTACAAGACGAGTAGTGAGAACAGCAGCAACAAGTCATTACAGTCTACGAAAACTTCACGGATCAGCTAACAAAGAGATCATAAAGAGAGCACTAACACCACCAGCTCGTCGACCAACTTTGAGATGGTTGGATTTCAAACCAACTCCAAGTCGACTTTGTAATATGTCTGCAGCATAGTTGTAGCTACTTGAATGTACAAAAGATGTAACAATTTTTTTTTATTTGTTTACTCTATATTATCATCAAGAATCAAACATTTTCATTTGTTCTGTTTTACAAGAAGCA</genome_strand>
        <mrna_strand>TTCCGTCCAGTAGCTCCTTCACTCAATAGTCTTGCGTTGTTTGGAAAAAAACTCGAACAAGAACATCAACATGGAGGTTGATCTCCGTTCAAATGAAACCAATATCACTGCAAAGTCACCACTTGTTAGCAGAAACAACAAGCCAGAAAAGAAAAGTGTTAAGTTTCCAGCATCACCAAGATTTCAACGAAGAGATTCATCACCACACGTTACAAGACGAGTAGTGAGAACAGCAGCAACAAGTCATTACAGTCTACGAAAACTTCACGGATCAGCTAACAAAGAGATCATAAAGAGAGCACTAACACCACCAGCTCGTCGACCAACTTTGAGATGGTTGGATTTCAAACCAACTCCAAGTCGACTTTGTAATATGTCTGCAGCATAGTTGTAGCTACTTGAATGTACAAAAGATGTAACAATTTTTTTTTATTTGTTTACTCTATATTATCATCAAGAATCAAACATTTTCATTTGTTCTGTTTTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E704482" ref_strand="+" ref_description="SGN-E704482 [FA24BF11]">
      <seq>gctgcctgtgcttccgctatccgtttatggtgctgttgcaatggctcatagtgatgtatcagatgagaattcatcaccaagtcagttcttcttctacctttacgataagagaaattctggcttgggaggattgtcatttgatgagggtcaattttcggtcttcggatatacaactgttgggagagatatccttcctcagatcaaaacgggtgacataattcgatctgcaaagctggtggaaggacaagaccgcctcgttttaccaccacaggataactaaccttgttatatcctcaatttttttggaatattcaacatgtcattcttcgttacccgtccgtcatttattagtacccaaaaaatggatgctgcttcttgtaaaacagaacaaatgaaaatgtttgattcttgatgataatatagagtaaacaaataaaaaaaaattgttacatcttttgtacattcaagtagctacaactatgctgcagacatattacaaagtcgacttggagttggtttgaaatccaaccatctcaaagttggtcgacgagctggtggtgttagtgctctctttatgatctctttgttagctgatccgtgaagttttcgtagactgtaatgacttgttgctgctgttctcactactcgtcttgtaacgtgtggtgatgaatctcttcgttgaaatcttggtgatgctggaaacttaacacttttcttttctggcttgttgtttctgctaacaagtggtgactttgcagtgatattggtttcatttgaacggagatcaacctccatgttgatgttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="132688" stop="131083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132388" g_stop="132274" g_length="115"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="115" r_length="115" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132273" i_stop="132177" i_length="97">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132176" g_stop="132127" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="116" r_stop="165" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132126" i_stop="132026" i_length="101">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="132025" g_stop="131383" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="808" r_length="643" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E704482" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>808</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704482" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="132388" e_stop="132274"/>
          <exon e_start="132176" e_stop="132127"/>
          <exon e_start="132025" e_stop="131383"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGCCTGTGCTTCCGCTATCCGTTTATGGTGCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAATGTAAGTAGCAATTCATCGGTATACACTATTCTTTCGTTTTTTCTTGTTATTCTTTTCTTCGCCACCTAACTTATCCAATCAATATGTTGTTTCTCAGTCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGGGTATAGTTTCTTGCGACTCTGCTATCTATGAAAACCTATCGTATCTTCAACAAATCGGTGATTATAGTTGTTCTAACGATAACCCGTGTTATGATTCACAGATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAGAGTAAACAAATAAAAAAAAATTGTTACATCTTTTGTACATTCAAGTAGCTACAACTATGCTGCAGACATATTACAAAGTCGACTTGGAGTTGGTTTGAAATCCAACCATCTCAAAGTTGGTCGACGAGCTGGTGGTGTTAGTGCTCTCTTTATGATCTCTTTGTTAGCTGATCCGTGAAGTTTTCGTAGACTGTAATGACTTGTTGCTGCTGTTCTCACTACTCGTCTTGTAACGTGTGGTGATGAATCTCTTCGTTGAAATCTTGGTGATGCTGGAAACTTAACACTTTTCTTTTCTGGCTTGTTGTTTCTGCTAACAAGTGGTGACTTTGCAGTGATATTGGTTTCATTTGAACGGAGATCAACCTCCATGTTGATGTTCTTG</genome_strand>
        <mrna_strand>GCTGCCTGTGCTTCCGCTATCCGTTTATGGTGCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAAT.................................................................................................TCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGG.....................................................................................................ATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAGAGTAAACAAATAAAAAAAAATTGTTACATCTTTTGTACATTCAAGTAGCTACAACTATGCTGCAGACATATTACAAAGTCGACTTGGAGTTGGTTTGAAATCCAACCATCTCAAAGTTGGTCGACGAGCTGGTGGTGTTAGTGCTCTCTTTATGATCTCTTTGTTAGCTGATCCGTGAAGTTTTCGTAGACTGTAATGACTTGTTGCTGCTGTTCTCACTACTCGTCTTGTAACGTGTGGTGATGAATCTCTTCGTTGAAATCTTGGTGATGCTGGAAACTTAACACTTTTCTTTTCTGGCTTGTTGTTTCTGCTAACAAGTGGTGACTTTGCAGTGATATTGGTTTCATTTGAACGGAGATCAACCTCCATGTTGATGTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E217901" ref_strand="-" ref_description="SGN-E217901 [cLEL-23-B1]">
      <seq>tgtatcagatgagaattcatcaccaagtcagttcttcttctacctttacgataagagaaattctggcttgggaggattgtcatttgatgagggtcaattttcggtcttcggatatacaactgttgggagagatatccttcctcagatcaaaacgggtgacataattcgatctgcaaagctggtggaaggacaagaccgcctcgttttaccaccacaggataactaaccttgttatatcctcaatttttttggaatattcaacatgtcattcttcgttacccgtccgtcatttattagtacccaaaaaatggatgctgcttcttgtaaaacagaacaaatgaaaatgtttgattcttgatgataatatagagtaaacaaataaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="132634" stop="122853"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132334" g_stop="132274" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="61" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132273" i_stop="132177" i_length="97">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132176" g_stop="132127" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="62" r_stop="111" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132126" i_stop="132026" i_length="101">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="132025" g_stop="131735" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="402" r_length="291" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E217901" ref_strand="-">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>402</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E217901" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="132334" e_stop="132274"/>
          <exon e_start="132176" e_stop="132127"/>
          <exon e_start="132025" e_stop="131735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAATGTAAGTAGCAATTCATCGGTATACACTATTCTTTCGTTTTTTCTTGTTATTCTTTTCTTCGCCACCTAACTTATCCAATCAATATGTTGTTTCTCAGTCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGGGTATAGTTTCTTGCGACTCTGCTATCTATGAAAACCTATCGTATCTTCAACAAATCGGTGATTATAGTTGTTCTAACGATAACCCGTGTTATGATTCACAGATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAGAGTAAACAAATAAAAAAAAATTGTTACATCTTT</genome_strand>
        <mrna_strand>TGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAAT.................................................................................................TCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGG.....................................................................................................ATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAGAGTAAACAAATAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E218121" ref_strand="-" ref_description="SGN-E218121 [cLEL-23-B1]">
      <seq>aattctggcttgggaggattgtcatttgatgagggtcaattttcggtcttcggatatacaactgttgggagagatatccttcctcagatcaaaacgggtgacataattcgatctgcaaagctggtggaaggacaagaccgcctcgttttacccccccaggataactaaccttgttatatcctcaatttttttggaatattcaacatgtcattcttcgttacccgtccgtcatttattagtacccaaaaaatggatgctgcttcttgtaaaacagaacaaatgaaaatgtttgattcttgatgataatatagagtaaaccaataaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="132478" stop="74867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132276" g_stop="132274" g_length="3"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="3" r_length="3" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132273" i_stop="132177" i_length="97">
            <donor d_prob="0.968" d_score="0.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132176" g_stop="132127" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="4" r_stop="53" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132126" i_stop="132026" i_length="101">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="132025" g_stop="131735" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="54" r_stop="344" r_length="291" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E218121" ref_strand="-">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E218121" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="132276" e_stop="132274"/>
          <exon e_start="132176" e_stop="132127"/>
          <exon e_start="132025" e_stop="131735"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGTAAGTAGCAATTCATCGGTATACACTATTCTTTCGTTTTTTCTTGTTATTCTTTTCTTCGCCACCTAACTTATCCAATCAATATGTTGTTTCTCAGTCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGGGTATAGTTTCTTGCGACTCTGCTATCTATGAAAACCTATCGTATCTTCAACAAATCGGTGATTATAGTTGTTCTAACGATAACCCGTGTTATGATTCACAGATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAGAGTAAACAAATAAAAAAAAATTGTTACATCTTT</genome_strand>
        <mrna_strand>AAT.................................................................................................TCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGG.....................................................................................................ATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCCCCCCAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAGAGTAAACCAATAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E538193" ref_strand="-" ref_description="SGN-E538193 [TUS-57-D11]">
      <seq>atttttgttgcctcagcagtacgtgaaatacccaaggctcacagggagaggaatagttgaatttacagttgagaaagtagatggttcagcattttctcctgaatctgcaggtgaagccaaaagcactgcaaaaattcaggttgttatagatgggttttcagcaccactgactgcaggaaacttcgcaaaactggtggtagatggggcatatgatgggatgaagctgacttgtgcaaaccaagcaattctttcggacagcgaggtgggaaagaccacaggatacagtgttccattggaaatcaagccagccggacaatttgagcctctttacagaacaacattaagcattcaggatggggagctgcctgtgcttccgctatccgtttatggtgctgttgcaatggctcatagtgatgtatcagatgagaattcatcaccaagtcagttcttcttctacctttacgataagagaaattctggcttgggaggattgtcatttgatgagggtcaattttcggtcttcggatatacaactgttgggagagatatccttcctcagatcaaaacgggtgacataattcgatctgcaaagctggtggaaggacaagaccgcctcgttttaccaccacaggataactaaccttgttatatcctcaatttttttggaatattcaacatgtcattcttcgttacccgtccgtcatttattagtacccaaaaaatggatgctgcttcttgtaaaacagaacaaatgaaaatgtttgattcttgatgataaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="134820" stop="131469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134520" g_stop="134485" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134484" i_stop="134132" i_length="353">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134131" g_stop="134029" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="139" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134028" i_stop="133409" i_length="620">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="133408" g_stop="133355" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="193" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="133354" i_stop="132649" i_length="706">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="132648" g_stop="132490" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="352" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="132489" i_stop="132397" i_length="93">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="132396" g_stop="132274" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="353" r_stop="475" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="132273" i_stop="132177" i_length="97">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="132176" g_stop="132127" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="525" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="132126" i_stop="132026" i_length="101">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="132025" g_stop="131768" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="783" r_length="258" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E538193" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>783</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E538193" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="134520" e_stop="134485"/>
          <exon e_start="134131" e_stop="134029"/>
          <exon e_start="133408" e_stop="133355"/>
          <exon e_start="132648" e_stop="132490"/>
          <exon e_start="132396" e_stop="132274"/>
          <exon e_start="132176" e_stop="132127"/>
          <exon e_start="132025" e_stop="131768"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTGTTGCCTCAGCAGTACGTGAAATACCCAAGGTAAGGGCTGTCATTATTTCTCTTCTTAATATGGCATTTCTACTGATTGAAAAGCGAGTTGCTTAATGACAACCATGTACGTACATCGATTATCAAATCCGAGGACGATTACATCTTGCATATTAAATGTGCCGTTTTGATACTTATGGTGCCTTTGTATATCCAAATGTTCAGATCATGGTTTCTTATCACTTCATAAGCAGCATTGTTGCATAGCTATGTAGATAAATTTGAGTTGAGCTGTTCTTTTTAAGCACCCTGTGTTCACGTTACAACAACCATGTTAAAATAACTACTCAATGATTTCTTTGAGGAAGATGGGGTGTGTTATATTCTTCTACTAAATTCGTCAGGCTCACAGGGAGAGGAATAGTTGAATTTACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATCTGCAGGTGAAGCCAAAAGCACTGCAAAAATTCAGGTATGTTAAATCCTTTATTCGAGAGTCAGTAAAAATATCTTGCACTGCCCATTTCTTTGTTTGATCCTTTGTTCTAAACTTGATGATTAAGCATCAATCGAGACCTTTAAGTTAAGAGACTGTTCCTTCTGGGAAGTTATTTGCTAATATGACTTGAATCTGTCATTTGTTTGTTTCTGTGATGGTCATCATCTCATGCAATAGCTTCATCGTTGAGACACTAGTGCAATTTAATCAAATCCCGAAATGGCTGTACTGTCTCTTTCTCTTTCTTTGAACCACCTGTCCTATATTGTGCATTGAGATAGAAGTGTGTTGCTTTTGTATGATGAAGTATTCCCCAATTAAACATTTGCTTCGTCTTTTCTGAGGGAGTTACAATTTCTGTCGTATAATAGAGCCTGCACTAGAAGAGTTTTTAATGTTATACTATTATAACTTCTAATATTCTCTCCTATGTGGTTTGCGAGCTATTGCAAAGGAGCGGGGGTTTTACCTTGTGCGCACCCAAAGGGTAGCCGCGGCGGGTTTCCCTTGTCATAAAAAAAAACGTCTAATATTCTTCAGATAGATATTTCGTCTAACACAAAAGTATTAAACTGTATAATGACATGATGCAGGTTGTTATAGATGGGTTTTCAGCACCACTGACTGCAGGAAACTTCGCAAAACTGGTAAGGTAGTGAAATCTCACATCATCCTTGTAAGTACTCATTATGCAACAAAAACAATAACTATGCCTCAATCCCAAACTAGTTAGGATTGGCCATATGATCCTTGATATAATTGTCGTCCATTTTGGGCCCTCTTCATTGTAATATCAGTAATTAAGAAATGAACTTTGTATCTAACTCAACTACAAAGGCTAGGGCATGAAGTAAGGATTTTCCATGACCATATAAGGAGGAAAACAACTCAATCACACACTGATGTGGGAGTCTTAACAACTTTCAATAATTTCTCCTTTCTTTCCCCTTTGAGGATGACTTTCTACTTCCGTTTGACAAATTGATCAGACTTCAGATATTTCTTCACATGAAGCATGTTCGACACCTAAAGGTGGCTTTTTATTCTTTCATTTCCCACATCTTTTTTGCTGGGCCCTGATAACTACTTGAAGAGTATGTATAGTTTTCTTTCCGTAGCTCTAGATTATTAACTTGCCACTGTGCTAAAATATGGAAAACCATCATCTTGATGTCTTAAGGAGTAATGTTTACACAATGAGAGCATGGGAAATAATTTATGAATTTCTTGATTATGGTATCCTTGCTGACCAAAGATGAGTACAACTAGCGGTCTCTGATGTTTCGAGCAAGGATTTCAGTATGATCTAATTCAGACATTTCTATATTGTAAAACAAATCTATAATTCTTTAGGTGGTAGATGGGGCATATGATGGGATGAAGCTGACTTGTGCAAACCAAGCAATTCTTTCGGACAGCGAGGTGGGAAAGACCACAGGATACAGTGTTCCATTGGAAATCAAGCCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAGCATTCAGGTACCCACATGTTTCATGGATAATAACAGACTGATCTTTGGCGTTTATATCTTTTGTGCTTGTGCTTATGGTTTATTCCTTTCGTTACGGAAGGATGGGGAGCTGCCTGTGCTTCCGCTATCCGTTTATGGTGCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAATGTAAGTAGCAATTCATCGGTATACACTATTCTTTCGTTTTTTCTTGTTATTCTTTTCTTCGCCACCTAACTTATCCAATCAATATGTTGTTTCTCAGTCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGGGTATAGTTTCTTGCGACTCTGCTATCTATGAAAACCTATCGTATCTTCAACAAATCGGTGATTATAGTTGTTCTAACGATAACCCGTGTTATGATTCACAGATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAG</genome_strand>
        <mrna_strand>ATTTTTGTTGCCTCAGCAGTACGTGAAATACCCAAG.................................................................................................................................................................................................................................................................................................................................................................GCTCACAGGGAGAGGAATAGTTGAATTTACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATCTGCAGGTGAAGCCAAAAGCACTGCAAAAATTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTATAGATGGGTTTTCAGCACCACTGACTGCAGGAAACTTCGCAAAACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTAGATGGGGCATATGATGGGATGAAGCTGACTTGTGCAAACCAAGCAATTCTTTCGGACAGCGAGGTGGGAAAGACCACAGGATACAGTGTTCCATTGGAAATCAAGCCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAGCATTCAG.............................................................................................GATGGGGAGCTGCCTGTGCTTCCGCTATCCGTTTATGGTGCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAAT.................................................................................................TCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGG.....................................................................................................ATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E268081" ref_strand="-" ref_description="SGN-E268081 [cLEI-15-L8]">
      <seq>aagaccacaggatacagtgttccattggaaatcaagccagccggacaatttgagcctctttacagaacaacattaagcattcaggatggggagctgcctgtgcttccgctatccgtttatggtgctgttgcaatggctcatagtgatgtatcagatgagaattcatcaccaagtcagttcttcttctacctttacgataagagaaattctggcttgggaggattgtcatttgatgagggtcaattttcggtcttcggatatacaactgttgggagagatatccttcctcagatcaaaacgggtgacataattcgatctgcaaagctggtggaaggacaagaccgcctcgttttaccaccacaggataactaaccttgttatatcctcaatttttttggaatattcaacatgtcattcttcgttacccgtccgtcatttattagtacccaaaaaatggatgctgcttcttgtaaaacagaacaaatgaaaatgtttgattcttgatgataaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="132873" stop="131469"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="132573" g_stop="132490" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="84" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="132489" i_stop="132397" i_length="93">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="132396" g_stop="132274" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="85" r_stop="207" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="132273" i_stop="132177" i_length="97">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="132176" g_stop="132127" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="208" r_stop="257" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="132126" i_stop="132026" i_length="101">
            <donor d_prob="0.938" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="132025" g_stop="131769" g_length="257"/>
          <reference_exon_boundary r_type="cDNA" r_start="258" r_stop="514" r_length="257" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E268081" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E268081" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="132573" e_stop="132490"/>
          <exon e_start="132396" e_stop="132274"/>
          <exon e_start="132176" e_stop="132127"/>
          <exon e_start="132025" e_stop="131769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGACCACAGGATACAGTGTTCCATTGGAAATCAAGCCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAGCATTCAGGTACCCACATGTTTCATGGATAATAACAGACTGATCTTTGGCGTTTATATCTTTTGTGCTTGTGCTTATGGTTTATTCCTTTCGTTACGGAAGGATGGGGAGCTGCCTGTGCTTCCGCTATCCGTTTATGGTGCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAATGTAAGTAGCAATTCATCGGTATACACTATTCTTTCGTTTTTTCTTGTTATTCTTTTCTTCGCCACCTAACTTATCCAATCAATATGTTGTTTCTCAGTCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGGGTATAGTTTCTTGCGACTCTGCTATCTATGAAAACCTATCGTATCTTCAACAAATCGGTGATTATAGTTGTTCTAACGATAACCCGTGTTATGATTCACAGATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATA</genome_strand>
        <mrna_strand>AAGACCACAGGATACAGTGTTCCATTGGAAATCAAGCCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAGCATTCAG.............................................................................................GATGGGGAGCTGCCTGTGCTTCCGCTATCCGTTTATGGTGCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAAT.................................................................................................TCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGG.....................................................................................................ATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E345004" ref_strand="+" ref_description="SGN-E345004 [cTOF-22-H7]">
      <seq>ttgttactttacaatattgttttgctgcagaatttgtgaaatcttatgcacttgtgatagtaacattgccggtttgcatgatcgtattccagtaatactctttatcatgcttgaatgtctgatatggtgtcaacgaaaccagtgaggatctcaaggattgatgttttcacagacttcttaaatttcttaagcaatcatctgaacagatgatatctttaaacacaaaccttactgcaatcaagatgaatttctttttatcttgtcagggtggattacagaaacttctacagtacataaaggataaagatccagataaagtatccgtttgtcttgcatctacattggatactattgcacagatggagttgttacaggccccaggcttatcatttttgttgcctcagcagtacgtgaaatacccaaggctcacagggagaggaatagttgaatttacagttgagaaagtagatggttcagcattttctcctgaatctgcaggtgaagccaaaagcactgcaaaaattcaggttgttatagatgggttttcagcaccactgactgcaggaaacttcgcaaactggtggtagatggggcatatgatgggatgaagctgacttgtgcaaaccaagcaattctttcggacagcgaggtgggaaagaccacaggatacagtgttccattggaaatcaagccagccggacaatttgagcctctttacagaacaacattaagcattcnagatggggagctgcctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="135505" stop="132188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135205" g_stop="134832" g_length="374"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="374" r_length="374" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134831" i_stop="134535" i_length="297">
            <donor d_prob="0.881" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134534" g_stop="134485" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="424" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134484" i_stop="134132" i_length="353">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134131" g_stop="134029" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="527" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="134028" i_stop="133409" i_length="620">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="133408" g_stop="133355" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="580" r_length="53" r_score="0.981"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="133354" i_stop="132649" i_length="706">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="132648" g_stop="132490" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="739" r_length="159" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="132489" i_stop="132397" i_length="93">
            <donor d_prob="0.969" d_score="0.96"/>
            <acceptor a_prob="0.951" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="132396" g_stop="132380" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="740" r_stop="756" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E345004" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E345004" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135205" e_stop="134832"/>
          <exon e_start="134534" e_stop="134485"/>
          <exon e_start="134131" e_stop="134029"/>
          <exon e_start="133408" e_stop="133355"/>
          <exon e_start="132648" e_stop="132490"/>
          <exon e_start="132396" e_stop="132380"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTACTTTACAATATTGTTTTGCTGCAGAATTTGTGAAATCTTATGCACTTGTGATAGTAACATTGCCGGTTTGCATGATCGTATTCCAGTAATACTCTTTATCATGCTTGAATGTCTGATATGGTGTCAACGAAACCAGTGAGGATCTCAAGGATTGATGTTTTCACAGACTTCTTAAATTTCTTAAGCAATCATCTGAACAGATGATATCTTTAAACACAAACCTTACTGCAATCAAGATGAATTTCTTTTTATCTTGTCAGGGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAGGTATTTATGAACTCCTTTGTACATTCTTTAGTGGTGTAAAGGGGAAAATCGGTAATGGAAAGAACAGTTACTGTGTTTGAATAGTTCAGAAGAAAAAAAAATGTACTAAGGTTCAACTTGTGCCCTTAGGAAGTGATACTGTTCTTTGAAGAATATAACAAAGGATAAAGCTTAAACGCAAAGAGTTCAAGTCTCTCATGCATTACGATTTTCACAATTATACATTCTCCAATAACATTTTCCATGTAAAGTTTTTAATGTAGTTAACAATATCTCAACGACATTATCTCTCTACAGGCCCCAGGCTTATCATTTTTGTTGCCTCAGCAGTACGTGAAATACCCAAGGTAAGGGCTGTCATTATTTCTCTTCTTAATATGGCATTTCTACTGATTGAAAAGCGAGTTGCTTAATGACAACCATGTACGTACATCGATTATCAAATCCGAGGACGATTACATCTTGCATATTAAATGTGCCGTTTTGATACTTATGGTGCCTTTGTATATCCAAATGTTCAGATCATGGTTTCTTATCACTTCATAAGCAGCATTGTTGCATAGCTATGTAGATAAATTTGAGTTGAGCTGTTCTTTTTAAGCACCCTGTGTTCACGTTACAACAACCATGTTAAAATAACTACTCAATGATTTCTTTGAGGAAGATGGGGTGTGTTATATTCTTCTACTAAATTCGTCAGGCTCACAGGGAGAGGAATAGTTGAATTTACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATCTGCAGGTGAAGCCAAAAGCACTGCAAAAATTCAGGTATGTTAAATCCTTTATTCGAGAGTCAGTAAAAATATCTTGCACTGCCCATTTCTTTGTTTGATCCTTTGTTCTAAACTTGATGATTAAGCATCAATCGAGACCTTTAAGTTAAGAGACTGTTCCTTCTGGGAAGTTATTTGCTAATATGACTTGAATCTGTCATTTGTTTGTTTCTGTGATGGTCATCATCTCATGCAATAGCTTCATCGTTGAGACACTAGTGCAATTTAATCAAATCCCGAAATGGCTGTACTGTCTCTTTCTCTTTCTTTGAACCACCTGTCCTATATTGTGCATTGAGATAGAAGTGTGTTGCTTTTGTATGATGAAGTATTCCCCAATTAAACATTTGCTTCGTCTTTTCTGAGGGAGTTACAATTTCTGTCGTATAATAGAGCCTGCACTAGAAGAGTTTTTAATGTTATACTATTATAACTTCTAATATTCTCTCCTATGTGGTTTGCGAGCTATTGCAAAGGAGCGGGGGTTTTACCTTGTGCGCACCCAAAGGGTAGCCGCGGCGGGTTTCCCTTGTCATAAAAAAAAACGTCTAATATTCTTCAGATAGATATTTCGTCTAACACAAAAGTATTAAACTGTATAATGACATGATGCAGGTTGTTATAGATGGGTTTTCAGCACCACTGACTGCAGGAAACTTCGCAAAACTGGTAAGGTAGTGAAATCTCACATCATCCTTGTAAGTACTCATTATGCAACAAAAACAATAACTATGCCTCAATCCCAAACTAGTTAGGATTGGCCATATGATCCTTGATATAATTGTCGTCCATTTTGGGCCCTCTTCATTGTAATATCAGTAATTAAGAAATGAACTTTGTATCTAACTCAACTACAAAGGCTAGGGCATGAAGTAAGGATTTTCCATGACCATATAAGGAGGAAAACAACTCAATCACACACTGATGTGGGAGTCTTAACAACTTTCAATAATTTCTCCTTTCTTTCCCCTTTGAGGATGACTTTCTACTTCCGTTTGACAAATTGATCAGACTTCAGATATTTCTTCACATGAAGCATGTTCGACACCTAAAGGTGGCTTTTTATTCTTTCATTTCCCACATCTTTTTTGCTGGGCCCTGATAACTACTTGAAGAGTATGTATAGTTTTCTTTCCGTAGCTCTAGATTATTAACTTGCCACTGTGCTAAAATATGGAAAACCATCATCTTGATGTCTTAAGGAGTAATGTTTACACAATGAGAGCATGGGAAATAATTTATGAATTTCTTGATTATGGTATCCTTGCTGACCAAAGATGAGTACAACTAGCGGTCTCTGATGTTTCGAGCAAGGATTTCAGTATGATCTAATTCAGACATTTCTATATTGTAAAACAAATCTATAATTCTTTAGGTGGTAGATGGGGCATATGATGGGATGAAGCTGACTTGTGCAAACCAAGCAATTCTTTCGGACAGCGAGGTGGGAAAGACCACAGGATACAGTGTTCCATTGGAAATCAAGCCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAGCATTCAGGTACCCACATGTTTCATGGATAATAACAGACTGATCTTTGGCGTTTATATCTTTTGTGCTTGTGCTTATGGTTTATTCCTTTCGTTACGGAAGGATGGGGAGCTGCCTGT</genome_strand>
        <mrna_strand>TTGTTACTTTACAATATTGTTTTGCTGCAGAATTTGTGAAATCTTATGCACTTGTGATAGTAACATTGCCGGTTTGCATGATCGTATTCCAGTAATACTCTTTATCATGCTTGAATGTCTGATATGGTGTCAACGAAACCAGTGAGGATCTCAAGGATTGATGTTTTCACAGACTTCTTAAATTTCTTAAGCAATCATCTGAACAGATGATATCTTTAAACACAAACCTTACTGCAATCAAGATGAATTTCTTTTTATCTTGTCAGGGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG.........................................................................................................................................................................................................................................................................................................GCCCCAGGCTTATCATTTTTGTTGCCTCAGCAGTACGTGAAATACCCAAG.................................................................................................................................................................................................................................................................................................................................................................GCTCACAGGGAGAGGAATAGTTGAATTTACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATCTGCAGGTGAAGCCAAAAGCACTGCAAAAATTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTATAGATGGGTTTTCAGCACCACTGACTGCAGGAAACTTCGC-AAACTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTAGATGGGGCATATGATGGGATGAAGCTGACTTGTGCAAACCAAGCAATTCTTTCGGACAGCGAGGTGGGAAAGACCACAGGATACAGTGTTCCATTGGAAATCAAGCCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAGCATTCNA.............................................................................................GATGGGGAGCTGCCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E463508" ref_strand="+" ref_description="SGN-E463508 [cPRO-14-J14]">
      <seq>cagaaacttctacaggacataaaggataaagatccggataaagtatccgtttgtcttgcatctacattggatactattgcacagctggagttgttacaggccccagggttatcatttttgttgcctcagcagtacttgaaatacccaaggttcacagggagaggaatagttgaatttacagttgagaaagtagatggttcagcattttctcctgaatctgctggtgaagccaaaagcactgcaaaaattcaggttgttatatatgggttttcagcaccactgactgcaggaaacttcgcaaaactggtggatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="135230" stop="133053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134930" g_stop="134832" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="134831" i_stop="134535" i_length="297">
            <donor d_prob="0.881" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="134534" g_stop="134485" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="149" r_length="50" r_score="0.960"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="134484" i_stop="134132" i_length="353">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.966" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="134131" g_stop="134029" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="252" r_length="103" r_score="0.981"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="134028" i_stop="133409" i_length="620">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="133408" g_stop="133355" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="306" r_length="54" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E463508" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>306</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E463508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134930" e_stop="134832"/>
          <exon e_start="134534" e_stop="134485"/>
          <exon e_start="134131" e_stop="134029"/>
          <exon e_start="133408" e_stop="133355"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAGGTATTTATGAACTCCTTTGTACATTCTTTAGTGGTGTAAAGGGGAAAATCGGTAATGGAAAGAACAGTTACTGTGTTTGAATAGTTCAGAAGAAAAAAAAATGTACTAAGGTTCAACTTGTGCCCTTAGGAAGTGATACTGTTCTTTGAAGAATATAACAAAGGATAAAGCTTAAACGCAAAGAGTTCAAGTCTCTCATGCATTACGATTTTCACAATTATACATTCTCCAATAACATTTTCCATGTAAAGTTTTTAATGTAGTTAACAATATCTCAACGACATTATCTCTCTACAGGCCCCAGGCTTATCATTTTTGTTGCCTCAGCAGTACGTGAAATACCCAAGGTAAGGGCTGTCATTATTTCTCTTCTTAATATGGCATTTCTACTGATTGAAAAGCGAGTTGCTTAATGACAACCATGTACGTACATCGATTATCAAATCCGAGGACGATTACATCTTGCATATTAAATGTGCCGTTTTGATACTTATGGTGCCTTTGTATATCCAAATGTTCAGATCATGGTTTCTTATCACTTCATAAGCAGCATTGTTGCATAGCTATGTAGATAAATTTGAGTTGAGCTGTTCTTTTTAAGCACCCTGTGTTCACGTTACAACAACCATGTTAAAATAACTACTCAATGATTTCTTTGAGGAAGATGGGGTGTGTTATATTCTTCTACTAAATTCGTCAGGCTCACAGGGAGAGGAATAGTTGAATTTACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATCTGCAGGTGAAGCCAAAAGCACTGCAAAAATTCAGGTATGTTAAATCCTTTATTCGAGAGTCAGTAAAAATATCTTGCACTGCCCATTTCTTTGTTTGATCCTTTGTTCTAAACTTGATGATTAAGCATCAATCGAGACCTTTAAGTTAAGAGACTGTTCCTTCTGGGAAGTTATTTGCTAATATGACTTGAATCTGTCATTTGTTTGTTTCTGTGATGGTCATCATCTCATGCAATAGCTTCATCGTTGAGACACTAGTGCAATTTAATCAAATCCCGAAATGGCTGTACTGTCTCTTTCTCTTTCTTTGAACCACCTGTCCTATATTGTGCATTGAGATAGAAGTGTGTTGCTTTTGTATGATGAAGTATTCCCCAATTAAACATTTGCTTCGTCTTTTCTGAGGGAGTTACAATTTCTGTCGTATAATAGAGCCTGCACTAGAAGAGTTTTTAATGTTATACTATTATAACTTCTAATATTCTCTCCTATGTGGTTTGCGAGCTATTGCAAAGGAGCGGGGGTTTTACCTTGTGCGCACCCAAAGGGTAGCCGCGGCGGGTTTCCCTTGTCATAAAAAAAAACGTCTAATATTCTTCAGATAGATATTTCGTCTAACACAAAAGTATTAAACTGTATAATGACATGATGCAGGTTGTTATAGATGGGTTTTCAGCACCACTGACTGCAGGAAACTTCGCAAAACTG</genome_strand>
        <mrna_strand>CAGAAACTTCTACAGGACATAAAGGATAAAGATCCGGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGCTGGAGTTGTTACAG.........................................................................................................................................................................................................................................................................................................GCCCCAGGGTTATCATTTTTGTTGCCTCAGCAGTACTTGAAATACCCAAG.................................................................................................................................................................................................................................................................................................................................................................GTTCACAGGGAGAGGAATAGTTGAATTTACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATCTGCTGGTGAAGCCAAAAGCACTGCAAAAATTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGTTATATATGGGTTTTCAGCACCACTGACTGCAGGAAACTTCGCAAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="-" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="146156" stop="145104"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="145856" g_stop="145417" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="439" r_length="439" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="-" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>440</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="145856" e_stop="145417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTATAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAAAGTAGTTTAAATTTTTTTCTTTAAACTAAGGAATGAAAG-AAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAAAAGAATCATATATACCCCTAAATA--ATTTTAAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAATTTTCGTTAAATGAAGAGTATATGTGAGCCATTTTGTAACGGCAAGGGTATATGTGAGCCGTTTGTATAACGGTAAAGGCATATATGTGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGGGTATATAAGACCCTTTTCC</genome_strand>
        <mrna_strand>TTATTGTAGATGACC-AATTTTTTCTTCGAATACGAAATTAAATTACAATACACAC-AAAAAAAA-TATTTGAATTTTTTTTATTTAAACTAAGGAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGAACCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E332009" ref_strand="+" ref_description="SGN-E332009 [cTOD-16-B20]">
      <seq>agagagagagataggctagaaagataaaaagaggatagagatagaaccttacaactctgtttcaatggcttcccctttatcctcttccattttctctccaaatttcactcatttgtaccaaaataaagctttcttccatagccatcttccacttcgttccccaatttatgctacactcaatcgcattgccttgaagaagaatgcttccatggaattgacaaagaggctgactgctccttccattttgtcaacatatttggagagtacagtcaagcaatttcagagtttaatggcggtgatcattatatttactgaaattgcatctccaatacctttgtatggtttgcaagatttgtccatttctcctgccgaggcagtgctttattcccctgaaacaaaaactctccctagaacaggagaattagctcttagaagagctatcccagccaacacaaatatgaaaactatacaggattcgcttgaggacatatcgtacttgctcaggattccacagcgaaaaccttttggaacaatggagggtaatgtgaagaaagctcttaagattgcaacagatgaaaaggcatccatcttggctagcattccagctgaactgaaagaaagaggttcagtcttgtacacatctcttgtagacggaaagggtggattacagaaacttctacagtacataaaggaataagatccagataaagtatccgtttgtcttgcatctacattggatactattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="157556" stop="161151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="157856" g_stop="158066" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158067" i_stop="159302" i_length="1236">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159303" g_stop="159563" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="472" r_length="261" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="159564" i_stop="159669" i_length="106">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="159670" g_stop="159759" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="562" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="159760" i_stop="160181" i_length="422">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="160182" g_stop="160277" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="658" r_length="96" r_score="0.969"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="160278" i_stop="160763" i_length="486">
            <donor d_prob="0.988" d_score="0.94"/>
            <acceptor a_prob="0.991" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="160764" g_stop="160851" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="746" r_length="88" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E332009" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>746</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="157856" e_stop="158066"/>
          <exon e_start="159303" e_stop="159563"/>
          <exon e_start="159670" e_stop="159759"/>
          <exon e_start="160182" e_stop="160277"/>
          <exon e_start="160764" e_stop="160851"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGAGAGATAGGCTAGAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGTTAGTTTAGTTCTGCTCAAAATTTAGATATTTTCATGTGTGAATTCTGTTAAAAATTTCATCATTCTTTTTGTGCGATGGCTTAATACATAAACAGACACTCGAACAAGCGGGCACTCCATCTTACAAAATGATCATCCAAATTTATTCAAAATTTATGTGTCACGTCAGCATTAGGTGTCCACGAGATAGGGCGGGGACAAATTGGAGTGTTTAGTTGTTAGCTGAGATCAAGTTGAAGTGTTTAGATGCATTGTGCCTTGTGTCATTCATTGTAGAATTATGAATAGTTCGATTGTATGATTCTACTCTATTTGTTTTCATTTATGTGATACGATTTTCTTTTTAGTCTGTTTCAAAAAGAATATCTTTTTTTTTCATATTGAGGAACAATTTACCAATTAATGACATGATTTGTAGCTACACAAATGTGTAAGATTTGTTTTAGATTGTAAGTTTCAATTGTCTTTATTCTAACTTAAACGCGGTATATCTAGTCAAACAGAACTGTTTTCTGATATTTAGTTTGGGCAAAGAATGCTGGTTCACCTCTAAAGTTTGATCTTTTACAAAATTTAAAGGACTGTTGGATCATCAAATGTAAGTCTTGCGATCATTTAGCGTGGGAGGAATCTGATTAGGAGGTAGAAAATGTGGAACTTTCGTGTTGGGACAAATATTAGGAATTGGTATTCCTGTTAAAGATTTGTACCATTTCATATCTTCTCAAGTGTATGAAAATGTTCATCATTGTGAAGGTTCTAGATAAGGCACGTAGTTTTCAAAGGTAAATACAACAACAACTACAAACACAGTGTAATTCTACGAGTTTGGGGAGGGTAACATGTATGCAGACGTACTCCTATATTTATGGGGTAGAGAGGTTGTTTCTGACCCTCGCAAACCCTCCTCCTTTATCTGTCTTGGGACCAGCAATGTGAACGAGTTCACACAGGCGGAGTTTGTCTTCAAAGGTAAATGTATCCATGAAATTAGTTAATGATGGAAATGCAAACTGTAACATAAGCTACCACTTTTCTGATTTTCCTTGTGACACTAGCATAATGCATTTGAAACCATATTTTGGGCTCTTTTTTTTTTCGTCGATTACATATTTGCACTTGCATAAACATCTTATTAGAGAACTCGTATTCACGATTCAGTGTTGCTTCGAAGATGATCAAAATACAATATTTATAACCCTCTCAGCTTCTTGATGGATTTTCAGTCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTAGTTTTATTTTGTTCTGCCTATATATTTTATATACTATTTTCCTATTTGGTAGTGTAGATAGTAAGTCATGAAGTATCGCTGTTCCCTGTCTATTTTCTCGCAGGATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAGGTATTACATAATATTTCCGTTGCAACCGAATTAGACACTTAAGGTTTGATCGTCTATCAAGGTAATCATTCTTTGACATGAATCGCAGCCATCCACAGGCGTGTTGGATATCAGGCCATTTCCATACAGTAAAAGGAACAAAATAGTTGTTCATTTATGTGTTTTTTTTTCAGAAAGATACCTTGTGATACAAGGAAGATATCTTTCCTTTCTCGTTTTTCTTTTAAACTATCCATCAAAAACAGTTATAGAATAGAGAATTCAAAGTCTCTAAGATGTTGACGTTGCATGCCTACTGACTGTAACAGATCGTTTCGTTCTGCAAATAATGAAAACACTTATAATGAAAGGATGTGTAGTCATCAGACACTCTTATTCTGTGTCTTTAAGTACATAAATCTAATGCTTCAATATCTCTTCAGATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAGGTAACATGAGACTACTTAGATTGTTTAGTTTAAAAGTACTTTAGGTTAGATGACTTCATTTTTCCCTCCAGTTTTTCACAAACTTGTATCAGTCTCTTGGTTCAATCTCTACTATCTACATTATGACCCCAAAAGAGGAAAAAAAAAAAAGAACTGGGAACTGTTATATATGTGCTCCAACCAATATCAGTGATGCCTATCTGATGCAGGAGCACATCTGTTGTTACTTTACAATATTGTTTTGCTGCAGAATTTGTGAAATCTTATGCACTTGTGATAGTAACATTGCCGGTTTGCATGATCGTATTCCAGTAATACTCTTTATCATGCTTGAATGTCTGATATGGTGTCAACGAAACCAGTGAGGATCTCAAGGATTGATGTTTTCACAGACTTCTTAAATTTCTTAAGCAATCATCTGAACAGATGATATCTTTAAACACAAACCTTACTGCAATCAAGATGAATTTCTTTTTATCTTGTCAGGGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAAAAAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTG</genome_strand>
        <mrna_strand>AGAGAGAGAGATAGGCTAGAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAG..........................................................................................................GATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAAGAGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATTACAGAAACTTCTACAGTACATAAAGGAATAAGATCCAGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E331905" ref_strand="+" ref_description="SGN-E331905 [cTOD-16-C21]">
      <seq>agagagagagataggctataaagataaaaagaggatagagatagaaccttacaactctgtttcaatggcttcccctttatcctcttccattttctctccaaatttcactcatttgtaccaaaataaagctttcttccatagccatcttccacttcgttccccaatttatgctacactcaatcgcattgccttgaagaagaatgcttccatggaattgacaaaaaggctgactgctccttccattttgtcaacatatttggagagtacagtcaagcaatttcagagtttaatggcggtgatcattatatttactgaaattgcatctccaatacctttgtatggtttgcaagatttgtccatttctcctgccgaagcagtgctttattcccctgaaacaaaaactctccctagaacaggagaattagctcttagaagagctatcccagccaacacaaatatgaaaactatacaggattcgcttgaggacatatcgtacttgctcaggattccacagctaaaaccttttggaacaatggagg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="157556" stop="160036"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="157856" g_stop="158066" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158067" i_stop="159302" i_length="1236">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159303" g_stop="159563" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="472" r_length="261" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="159564" i_stop="159669" i_length="106">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="159670" g_stop="159736" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="539" r_length="67" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E331905" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331905" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="157856" e_stop="158066"/>
          <exon e_start="159303" e_stop="159563"/>
          <exon e_start="159670" e_stop="159736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGAGAGATAGGCTAGAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGTTAGTTTAGTTCTGCTCAAAATTTAGATATTTTCATGTGTGAATTCTGTTAAAAATTTCATCATTCTTTTTGTGCGATGGCTTAATACATAAACAGACACTCGAACAAGCGGGCACTCCATCTTACAAAATGATCATCCAAATTTATTCAAAATTTATGTGTCACGTCAGCATTAGGTGTCCACGAGATAGGGCGGGGACAAATTGGAGTGTTTAGTTGTTAGCTGAGATCAAGTTGAAGTGTTTAGATGCATTGTGCCTTGTGTCATTCATTGTAGAATTATGAATAGTTCGATTGTATGATTCTACTCTATTTGTTTTCATTTATGTGATACGATTTTCTTTTTAGTCTGTTTCAAAAAGAATATCTTTTTTTTTCATATTGAGGAACAATTTACCAATTAATGACATGATTTGTAGCTACACAAATGTGTAAGATTTGTTTTAGATTGTAAGTTTCAATTGTCTTTATTCTAACTTAAACGCGGTATATCTAGTCAAACAGAACTGTTTTCTGATATTTAGTTTGGGCAAAGAATGCTGGTTCACCTCTAAAGTTTGATCTTTTACAAAATTTAAAGGACTGTTGGATCATCAAATGTAAGTCTTGCGATCATTTAGCGTGGGAGGAATCTGATTAGGAGGTAGAAAATGTGGAACTTTCGTGTTGGGACAAATATTAGGAATTGGTATTCCTGTTAAAGATTTGTACCATTTCATATCTTCTCAAGTGTATGAAAATGTTCATCATTGTGAAGGTTCTAGATAAGGCACGTAGTTTTCAAAGGTAAATACAACAACAACTACAAACACAGTGTAATTCTACGAGTTTGGGGAGGGTAACATGTATGCAGACGTACTCCTATATTTATGGGGTAGAGAGGTTGTTTCTGACCCTCGCAAACCCTCCTCCTTTATCTGTCTTGGGACCAGCAATGTGAACGAGTTCACACAGGCGGAGTTTGTCTTCAAAGGTAAATGTATCCATGAAATTAGTTAATGATGGAAATGCAAACTGTAACATAAGCTACCACTTTTCTGATTTTCCTTGTGACACTAGCATAATGCATTTGAAACCATATTTTGGGCTCTTTTTTTTTTCGTCGATTACATATTTGCACTTGCATAAACATCTTATTAGAGAACTCGTATTCACGATTCAGTGTTGCTTCGAAGATGATCAAAATACAATATTTATAACCCTCTCAGCTTCTTGATGGATTTTCAGTCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTAGTTTTATTTTGTTCTGCCTATATATTTTATATACTATTTTCCTATTTGGTAGTGTAGATAGTAAGTCATGAAGTATCGCTGTTCCCTGTCTATTTTCTCGCAGGATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGG</genome_strand>
        <mrna_strand>AGAGAGAGAGATAGGCTATAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGACAAAAAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAAGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAG..........................................................................................................GATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCTAAAACCTTTTGGAACAATGGAGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E331901" ref_strand="+" ref_description="SGN-E331901 [cTOD-16-A21]">
      <seq>agagagagagagaggccagaaagaaaaaaagaggagagagagagaaccccacaactcggtggcaatggctgcccacctatccacgaccattatctccccaaatctcactcatttggaccaaaataaagctttcttccagagccatcttccacttcggtccccaatttatgctacactcaatcgcattgccttgaagaagaatgcttccatggaattgacaaagaggctgactgctccttccattttgtcaacatatttggagagtacagtcaagcaatttcagagtttaatggcggcgatcattatatttactgaaattgcatctccaatacctttgcatggtttgcaagatttgtccatttcccctgccgaggcagtgctttattcccccgaaacaaaaacgctccctagaacaggagaattagctcttagaagagctatccca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="157633" stop="159836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="157856" g_stop="158066" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.891"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158067" i_stop="159302" i_length="1236">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159303" g_stop="159536" g_length="234"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="445" r_length="234" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E331901" ref_strand="+">
        <total_alignment_score>0.937</total_alignment_score>
        <cumulative_length_of_scored_exons>445</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331901" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="157856" e_stop="158066"/>
          <exon e_start="159303" e_stop="159536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGAGAGATAGGCTAGAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGTTAGTTTAGTTCTGCTCAAAATTTAGATATTTTCATGTGTGAATTCTGTTAAAAATTTCATCATTCTTTTTGTGCGATGGCTTAATACATAAACAGACACTCGAACAAGCGGGCACTCCATCTTACAAAATGATCATCCAAATTTATTCAAAATTTATGTGTCACGTCAGCATTAGGTGTCCACGAGATAGGGCGGGGACAAATTGGAGTGTTTAGTTGTTAGCTGAGATCAAGTTGAAGTGTTTAGATGCATTGTGCCTTGTGTCATTCATTGTAGAATTATGAATAGTTCGATTGTATGATTCTACTCTATTTGTTTTCATTTATGTGATACGATTTTCTTTTTAGTCTGTTTCAAAAAGAATATCTTTTTTTTTCATATTGAGGAACAATTTACCAATTAATGACATGATTTGTAGCTACACAAATGTGTAAGATTTGTTTTAGATTGTAAGTTTCAATTGTCTTTATTCTAACTTAAACGCGGTATATCTAGTCAAACAGAACTGTTTTCTGATATTTAGTTTGGGCAAAGAATGCTGGTTCACCTCTAAAGTTTGATCTTTTACAAAATTTAAAGGACTGTTGGATCATCAAATGTAAGTCTTGCGATCATTTAGCGTGGGAGGAATCTGATTAGGAGGTAGAAAATGTGGAACTTTCGTGTTGGGACAAATATTAGGAATTGGTATTCCTGTTAAAGATTTGTACCATTTCATATCTTCTCAAGTGTATGAAAATGTTCATCATTGTGAAGGTTCTAGATAAGGCACGTAGTTTTCAAAGGTAAATACAACAACAACTACAAACACAGTGTAATTCTACGAGTTTGGGGAGGGTAACATGTATGCAGACGTACTCCTATATTTATGGGGTAGAGAGGTTGTTTCTGACCCTCGCAAACCCTCCTCCTTTATCTGTCTTGGGACCAGCAATGTGAACGAGTTCACACAGGCGGAGTTTGTCTTCAAAGGTAAATGTATCCATGAAATTAGTTAATGATGGAAATGCAAACTGTAACATAAGCTACCACTTTTCTGATTTTCCTTGTGACACTAGCATAATGCATTTGAAACCATATTTTGGGCTCTTTTTTTTTTCGTCGATTACATATTTGCACTTGCATAAACATCTTATTAGAGAACTCGTATTCACGATTCAGTGTTGCTTCGAAGATGATCAAAATACAATATTTATAACCCTCTCAGCTTCTTGATGGATTTTCAGTCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCA</genome_strand>
        <mrna_strand>AGAGAGAGAGAGAGGCCAGAAAGAAAAAAAGAGGAGAGAGAGAGAACCCCACAACTCGGTGGCAATGGCTGCCCACCTATCCACGACCATTATCTCCCCAAATCTCACTCATTTGGACCAAAATAAAGCTTTCTTCCAGAGCCATCTTCCACTTCGGTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGCGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGCATGGTTTGCAAGATTTGTCCATTTCCCCTGCCGAGGCAGTGCTTTATTCCCCCGAAACAAAAACGCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E441666" ref_strand="+" ref_description="SGN-E441666 [cSTA-31-I19]">
      <seq>gagagatagactagaaagataaaagaggatagggatagaaccttacaactctgtttcaatggcttcccctttatcctcttccattttctctccaaatttcactcatttattccaaaataaagcttttttccctaatcatcttccacttcgttccccaatttatgctacactcactcgcattgcctcaaagaagaatgtttccatgtcatgcaggaattgacaaagaggccaactgctccttccattttgtcaacacatttggagagtacagtcaagcaatttcagagtttaatggcggtgatcattatctttactgaaattgcatctccaatacctttgtatggtttgcaagatttgtccatttctcctgctgaggcagtgctttattcccttgaaacaaaaactctccctagaacaggagaattggctctcagaagagctatcccagccaacacaaatatgaaaactatacaggattctcttgaggatatctcatacttgctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="157561" stop="159874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="157861" g_stop="158066" g_length="206"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.937"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158067" i_stop="159294" i_length="1228">
            <donor d_prob="0.995" d_score="0.92"/>
            <acceptor a_prob="0.967" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159295" g_stop="159563" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="474" r_length="269" r_score="0.970"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="159564" i_stop="159669" i_length="106">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.951" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="159670" g_stop="159699" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="475" r_stop="504" r_length="30" r_score="0.867"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E441666" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E441666" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="157861" e_stop="158066"/>
          <exon e_start="159295" e_stop="159563"/>
          <exon e_start="159670" e_stop="159699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGATAGGCTAGAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGTTAGTTTAGTTCTGCTCAAAATTTAGATATTTTCATGTGTGAATTCTGTTAAAAATTTCATCATTCTTTTTGTGCGATGGCTTAATACATAAACAGACACTCGAACAAGCGGGCACTCCATCTTACAAAATGATCATCCAAATTTATTCAAAATTTATGTGTCACGTCAGCATTAGGTGTCCACGAGATAGGGCGGGGACAAATTGGAGTGTTTAGTTGTTAGCTGAGATCAAGTTGAAGTGTTTAGATGCATTGTGCCTTGTGTCATTCATTGTAGAATTATGAATAGTTCGATTGTATGATTCTACTCTATTTGTTTTCATTTATGTGATACGATTTTCTTTTTAGTCTGTTTCAAAAAGAATATCTTTTTTTTTCATATTGAGGAACAATTTACCAATTAATGACATGATTTGTAGCTACACAAATGTGTAAGATTTGTTTTAGATTGTAAGTTTCAATTGTCTTTATTCTAACTTAAACGCGGTATATCTAGTCAAACAGAACTGTTTTCTGATATTTAGTTTGGGCAAAGAATGCTGGTTCACCTCTAAAGTTTGATCTTTTACAAAATTTAAAGGACTGTTGGATCATCAAATGTAAGTCTTGCGATCATTTAGCGTGGGAGGAATCTGATTAGGAGGTAGAAAATGTGGAACTTTCGTGTTGGGACAAATATTAGGAATTGGTATTCCTGTTAAAGATTTGTACCATTTCATATCTTCTCAAGTGTATGAAAATGTTCATCATTGTGAAGGTTCTAGATAAGGCACGTAGTTTTCAAAGGTAAATACAACAACAACTACAAACACAGTGTAATTCTACGAGTTTGGGGAGGGTAACATGTATGCAGACGTACTCCTATATTTATGGGGTAGAGAGGTTGTTTCTGACCCTCGCAAACCCTCCTCCTTTATCTGTCTTGGGACCAGCAATGTGAACGAGTTCACACAGGCGGAGTTTGTCTTCAAAGGTAAATGTATCCATGAAATTAGTTAATGATGGAAATGCAAACTGTAACATAAGCTACCACTTTTCTGATTTTCCTTGTGACACTAGCATAATGCATTTGAAACCATATTTTGGGCTCTTTTTTTTTTCGTCGATTACATATTTGCACTTGCATAAACATCTTATTAGAGAACTCGTATTCACGATTCAGTGTTGCTTCGAAGATGATCAAAATACAATATTTATAACCCTCTCAGCTTCTTGATGGATTTTCAGTCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTAGTTTTATTTTGTTCTGCCTATATATTTTATATACTATTTTCCTATTTGGTAGTGTAGATAGTAAGTCATGAAGTATCGCTGTTCCCTGTCTATTTTCTCGCAGGATTCGCTTGAGGACATATCGTACTTGCTC</genome_strand>
        <mrna_strand>GAGAGATAGACTAGAAAGAT-AAAAGAGGATAGGGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTATTCCAAAATAAAGCTTTTTTCCCTAATCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCACTCGCATTGCCTCAAAGAAGAATGTTTCCATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGCAGGAATTGACAAAGAGGCCAACTGCTCCTTCCATTTTGTCAACACATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATCTTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCTGAGGCAGTGCTTTATTCCCTTGAAACAAAAACTCTCCCTAGAACAGGAGAATTGGCTCTCAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAG..........................................................................................................GATTCTCTTGAGGATATCTCATACTTGCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E332815" ref_strand="+" ref_description="SGN-E332815 [cTOD-18-P23]">
      <seq>aaagataaaaagaggatagagatagaaccttacaactctgtttcaatggcttcccctttatcctcttccattttctctccaaatttcactcatttgtaccaaaataaagctttcttccatagccatcttccacttcgttccccaatttatgctacactcaatcgcattgccttgaagaagaatgcttccatgtcatgcaggaattgacaaagaggctgactgctccttccattttgtcaacatatttggagagtacagtcaagcaatttcagagtttaatggcggtgatcattatatttactgaaattgcatctccaatacctttgtatggtttgcaagatttgtccatttctcctgccgaggcagtgctttattcccctgaaacaaaaactctccctagaacaggagaattagctcttagaagagctatcccagccaacacaaatatgaaaactatacaggattcgcttgaggacatatcgtacttgctcaggattccacagcgaaaaccttttggaacaatggagggtaatgtgaagaaagctcttaagattgcaacagatgaaaaggcatccatcttggctagcattccagctgaactgaaagaagagggttcagtcttgtacacatctcttgtagacggaaagggtggattacagaaacttctacagtacataaaggataaagatccagataaagtatccgtttgtcttgcatctacattggatactattgcacagatggagttgttacaggccccaagcttatcattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="157575" stop="161172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="157875" g_stop="158066" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158067" i_stop="159294" i_length="1228">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159295" g_stop="159563" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="461" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="159564" i_stop="159669" i_length="106">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="159670" g_stop="159759" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="462" r_stop="551" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="159760" i_stop="160181" i_length="422">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="160182" g_stop="160277" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="647" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="160278" i_stop="160763" i_length="486">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="160764" g_stop="160871" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="648" r_stop="755" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E332815" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="0.977" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E332815" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="157875" e_stop="158066"/>
          <exon e_start="159295" e_stop="159563"/>
          <exon e_start="159670" e_stop="159759"/>
          <exon e_start="160182" e_stop="160277"/>
          <exon e_start="160764" e_stop="160871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGTTAGTTTAGTTCTGCTCAAAATTTAGATATTTTCATGTGTGAATTCTGTTAAAAATTTCATCATTCTTTTTGTGCGATGGCTTAATACATAAACAGACACTCGAACAAGCGGGCACTCCATCTTACAAAATGATCATCCAAATTTATTCAAAATTTATGTGTCACGTCAGCATTAGGTGTCCACGAGATAGGGCGGGGACAAATTGGAGTGTTTAGTTGTTAGCTGAGATCAAGTTGAAGTGTTTAGATGCATTGTGCCTTGTGTCATTCATTGTAGAATTATGAATAGTTCGATTGTATGATTCTACTCTATTTGTTTTCATTTATGTGATACGATTTTCTTTTTAGTCTGTTTCAAAAAGAATATCTTTTTTTTTCATATTGAGGAACAATTTACCAATTAATGACATGATTTGTAGCTACACAAATGTGTAAGATTTGTTTTAGATTGTAAGTTTCAATTGTCTTTATTCTAACTTAAACGCGGTATATCTAGTCAAACAGAACTGTTTTCTGATATTTAGTTTGGGCAAAGAATGCTGGTTCACCTCTAAAGTTTGATCTTTTACAAAATTTAAAGGACTGTTGGATCATCAAATGTAAGTCTTGCGATCATTTAGCGTGGGAGGAATCTGATTAGGAGGTAGAAAATGTGGAACTTTCGTGTTGGGACAAATATTAGGAATTGGTATTCCTGTTAAAGATTTGTACCATTTCATATCTTCTCAAGTGTATGAAAATGTTCATCATTGTGAAGGTTCTAGATAAGGCACGTAGTTTTCAAAGGTAAATACAACAACAACTACAAACACAGTGTAATTCTACGAGTTTGGGGAGGGTAACATGTATGCAGACGTACTCCTATATTTATGGGGTAGAGAGGTTGTTTCTGACCCTCGCAAACCCTCCTCCTTTATCTGTCTTGGGACCAGCAATGTGAACGAGTTCACACAGGCGGAGTTTGTCTTCAAAGGTAAATGTATCCATGAAATTAGTTAATGATGGAAATGCAAACTGTAACATAAGCTACCACTTTTCTGATTTTCCTTGTGACACTAGCATAATGCATTTGAAACCATATTTTGGGCTCTTTTTTTTTTCGTCGATTACATATTTGCACTTGCATAAACATCTTATTAGAGAACTCGTATTCACGATTCAGTGTTGCTTCGAAGATGATCAAAATACAATATTTATAACCCTCTCAGCTTCTTGATGGATTTTCAGTCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTAGTTTTATTTTGTTCTGCCTATATATTTTATATACTATTTTCCTATTTGGTAGTGTAGATAGTAAGTCATGAAGTATCGCTGTTCCCTGTCTATTTTCTCGCAGGATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAGGTATTACATAATATTTCCGTTGCAACCGAATTAGACACTTAAGGTTTGATCGTCTATCAAGGTAATCATTCTTTGACATGAATCGCAGCCATCCACAGGCGTGTTGGATATCAGGCCATTTCCATACAGTAAAAGGAACAAAATAGTTGTTCATTTATGTGTTTTTTTTTCAGAAAGATACCTTGTGATACAAGGAAGATATCTTTCCTTTCTCGTTTTTCTTTTAAACTATCCATCAAAAACAGTTATAGAATAGAGAATTCAAAGTCTCTAAGATGTTGACGTTGCATGCCTACTGACTGTAACAGATCGTTTCGTTCTGCAAATAATGAAAACACTTATAATGAAAGGATGTGTAGTCATCAGACACTCTTATTCTGTGTCTTTAAGTACATAAATCTAATGCTTCAATATCTCTTCAGATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAGGTAACATGAGACTACTTAGATTGTTTAGTTTAAAAGTACTTTAGGTTAGATGACTTCATTTTTCCCTCCAGTTTTTCACAAACTTGTATCAGTCTCTTGGTTCAATCTCTACTATCTACATTATGACCCCAAAAGAGGAAAAAAAAAAAAGAACTGGGAACTGTTATATATGTGCTCCAACCAATATCAGTGATGCCTATCTGATGCAGGAGCACATCTGTTGTTACTTTACAATATTGTTTTGCTGCAGAATTTGTGAAATCTTATGCACTTGTGATAGTAACATTGCCGGTTTGCATGATCGTATTCCAGTAATACTCTTTATCATGCTTGAATGTCTGATATGGTGTCAACGAAACCAGTGAGGATCTCAAGGATTGATGTTTTCACAGACTTCTTAAATTTCTTAAGCAATCATCTGAACAGATGATATCTTTAAACACAAACCTTACTGCAATCAAGATGAATTTCTTTTTATCTTGTCAGGGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAAAAAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG</genome_strand>
        <mrna_strand>AAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAG..........................................................................................................GATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E342431" ref_strand="+" ref_description="SGN-E342431 [cTOF-8-A18]">
      <seq>tggcttcccctttatcctcttccattttctctccaaatttcactcatttgtaccaaaataaagctttcttccatagccatcttccacttcgttccccaatttatgctacactcaatcgcattgccttgaagaagaatgcttccatggaattgacaaagaggctgactgctccttccattttgtcaacatatttggagagtacagtcaagcaatttcagagtttaatggcggtgatcattatatttactgaaattgcatctccaatacctttgtatggtttgcaagatttgtccatttctcctgccgaggcagtgctttattcccctgaaacaaaaactctccctagaacaggagaattagctcttagaagagctatcccagccaacacaaatatgaaaactatacaggattcgcttgaggacatatcgtacttgctcaggattccacagcgaaaaccttttggaacaatggagggtaatgtgaagaaagctcttaagattgcaacagatgaaaaggcatccatcttggctagcattccagctgaactgaaagaagagggttcagtcttgtacacatctcttgtagacggaaagggtggattacagaaacttctacagtacataaaggataaagatccagataaagtatccgtttgtcttgcatctacattggatactattgcacagatggagttgttacaggccccaggcttatcatttttgttgcctcagcagtacg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="157621" stop="161172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="157921" g_stop="158066" g_length="146"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="146" r_length="146" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158067" i_stop="159302" i_length="1236">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.914" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159303" g_stop="159563" g_length="261"/>
          <reference_exon_boundary r_type="cDNA" r_start="147" r_stop="407" r_length="261" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="159564" i_stop="159669" i_length="106">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="159670" g_stop="159759" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="497" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="159760" i_stop="160181" i_length="422">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="160182" g_stop="160277" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="593" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="160278" i_stop="160763" i_length="486">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="160764" g_stop="160871" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="701" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E342431" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="0.950" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E342431" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="157921" e_stop="158066"/>
          <exon e_start="159303" e_stop="159563"/>
          <exon e_start="159670" e_stop="159759"/>
          <exon e_start="160182" e_stop="160277"/>
          <exon e_start="160764" e_stop="160871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGTTAGTTTAGTTCTGCTCAAAATTTAGATATTTTCATGTGTGAATTCTGTTAAAAATTTCATCATTCTTTTTGTGCGATGGCTTAATACATAAACAGACACTCGAACAAGCGGGCACTCCATCTTACAAAATGATCATCCAAATTTATTCAAAATTTATGTGTCACGTCAGCATTAGGTGTCCACGAGATAGGGCGGGGACAAATTGGAGTGTTTAGTTGTTAGCTGAGATCAAGTTGAAGTGTTTAGATGCATTGTGCCTTGTGTCATTCATTGTAGAATTATGAATAGTTCGATTGTATGATTCTACTCTATTTGTTTTCATTTATGTGATACGATTTTCTTTTTAGTCTGTTTCAAAAAGAATATCTTTTTTTTTCATATTGAGGAACAATTTACCAATTAATGACATGATTTGTAGCTACACAAATGTGTAAGATTTGTTTTAGATTGTAAGTTTCAATTGTCTTTATTCTAACTTAAACGCGGTATATCTAGTCAAACAGAACTGTTTTCTGATATTTAGTTTGGGCAAAGAATGCTGGTTCACCTCTAAAGTTTGATCTTTTACAAAATTTAAAGGACTGTTGGATCATCAAATGTAAGTCTTGCGATCATTTAGCGTGGGAGGAATCTGATTAGGAGGTAGAAAATGTGGAACTTTCGTGTTGGGACAAATATTAGGAATTGGTATTCCTGTTAAAGATTTGTACCATTTCATATCTTCTCAAGTGTATGAAAATGTTCATCATTGTGAAGGTTCTAGATAAGGCACGTAGTTTTCAAAGGTAAATACAACAACAACTACAAACACAGTGTAATTCTACGAGTTTGGGGAGGGTAACATGTATGCAGACGTACTCCTATATTTATGGGGTAGAGAGGTTGTTTCTGACCCTCGCAAACCCTCCTCCTTTATCTGTCTTGGGACCAGCAATGTGAACGAGTTCACACAGGCGGAGTTTGTCTTCAAAGGTAAATGTATCCATGAAATTAGTTAATGATGGAAATGCAAACTGTAACATAAGCTACCACTTTTCTGATTTTCCTTGTGACACTAGCATAATGCATTTGAAACCATATTTTGGGCTCTTTTTTTTTTCGTCGATTACATATTTGCACTTGCATAAACATCTTATTAGAGAACTCGTATTCACGATTCAGTGTTGCTTCGAAGATGATCAAAATACAATATTTATAACCCTCTCAGCTTCTTGATGGATTTTCAGTCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTAGTTTTATTTTGTTCTGCCTATATATTTTATATACTATTTTCCTATTTGGTAGTGTAGATAGTAAGTCATGAAGTATCGCTGTTCCCTGTCTATTTTCTCGCAGGATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAGGTATTACATAATATTTCCGTTGCAACCGAATTAGACACTTAAGGTTTGATCGTCTATCAAGGTAATCATTCTTTGACATGAATCGCAGCCATCCACAGGCGTGTTGGATATCAGGCCATTTCCATACAGTAAAAGGAACAAAATAGTTGTTCATTTATGTGTTTTTTTTTCAGAAAGATACCTTGTGATACAAGGAAGATATCTTTCCTTTCTCGTTTTTCTTTTAAACTATCCATCAAAAACAGTTATAGAATAGAGAATTCAAAGTCTCTAAGATGTTGACGTTGCATGCCTACTGACTGTAACAGATCGTTTCGTTCTGCAAATAATGAAAACACTTATAATGAAAGGATGTGTAGTCATCAGACACTCTTATTCTGTGTCTTTAAGTACATAAATCTAATGCTTCAATATCTCTTCAGATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAGGTAACATGAGACTACTTAGATTGTTTAGTTTAAAAGTACTTTAGGTTAGATGACTTCATTTTTCCCTCCAGTTTTTCACAAACTTGTATCAGTCTCTTGGTTCAATCTCTACTATCTACATTATGACCCCAAAAGAGGAAAAAAAAAAAAGAACTGGGAACTGTTATATATGTGCTCCAACCAATATCAGTGATGCCTATCTGATGCAGGAGCACATCTGTTGTTACTTTACAATATTGTTTTGCTGCAGAATTTGTGAAATCTTATGCACTTGTGATAGTAACATTGCCGGTTTGCATGATCGTATTCCAGTAATACTCTTTATCATGCTTGAATGTCTGATATGGTGTCAACGAAACCAGTGAGGATCTCAAGGATTGATGTTTTCACAGACTTCTTAAATTTCTTAAGCAATCATCTGAACAGATGATATCTTTAAACACAAACCTTACTGCAATCAAGATGAATTTCTTTTTATCTTGTCAGGGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAAAAAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG</genome_strand>
        <mrna_strand>TGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAG..........................................................................................................GATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E486517" ref_strand="+" ref_description="SGN-E486517 [cSTE-22-K16]">
      <seq>cctcgtgccgaatcggcacgaggctttatcctcttccattttctctccaaatttcactcattcatttcgaaataaagctttcttccataaccatcctccacttcgttccccaatttatgctacactcactcgcattgcctcgaagaagaatgcttccatggaattgacaaagaggccaactgctccttccattttgtcaacacatttggagagtacagtcaagcaatttcagagtttaatggcggtgatcattatctttactgaaattgcatctccaatacctttgtatggtttgcaagatttgtccatatctcctgctgaggcagtgctttattcccctgaaacaaaaactctccctagaacaggagaattagctctcagaagagctatcccagccaacacaaatatgaaaactatacaggtggttttattttgttctgcatatatattctatataatatttatcctatttggtagtgtagaactgtagatagtaagtcatgaagtatcactattcctcgtttattttctctcaggattctcttgaggatatctcgtacttgctcaggattccacagcgaaaaccttttggaacaatggagggtaatgtgaagaaagcgcttaagattgcaacagatgaaaaggcatccatcttggctagcattccagctgaactgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="157630" stop="160534"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="157930" g_stop="158066" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="160" r_length="137" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158067" i_stop="159302" i_length="1236">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.914" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159303" g_stop="159759" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="626" r_length="466" r_score="0.915"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="159760" i_stop="160181" i_length="422">
            <donor d_prob="0.816" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="160182" g_stop="160234" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="679" r_length="53" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E486517" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>647</cumulative_length_of_scored_exons>
        <coverage percentage="0.953" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E486517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="157930" e_stop="158066"/>
          <exon e_start="159303" e_stop="159759"/>
          <exon e_start="160182" e_stop="160234"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGTTAGTTTAGTTCTGCTCAAAATTTAGATATTTTCATGTGTGAATTCTGTTAAAAATTTCATCATTCTTTTTGTGCGATGGCTTAATACATAAACAGACACTCGAACAAGCGGGCACTCCATCTTACAAAATGATCATCCAAATTTATTCAAAATTTATGTGTCACGTCAGCATTAGGTGTCCACGAGATAGGGCGGGGACAAATTGGAGTGTTTAGTTGTTAGCTGAGATCAAGTTGAAGTGTTTAGATGCATTGTGCCTTGTGTCATTCATTGTAGAATTATGAATAGTTCGATTGTATGATTCTACTCTATTTGTTTTCATTTATGTGATACGATTTTCTTTTTAGTCTGTTTCAAAAAGAATATCTTTTTTTTTCATATTGAGGAACAATTTACCAATTAATGACATGATTTGTAGCTACACAAATGTGTAAGATTTGTTTTAGATTGTAAGTTTCAATTGTCTTTATTCTAACTTAAACGCGGTATATCTAGTCAAACAGAACTGTTTTCTGATATTTAGTTTGGGCAAAGAATGCTGGTTCACCTCTAAAGTTTGATCTTTTACAAAATTTAAAGGACTGTTGGATCATCAAATGTAAGTCTTGCGATCATTTAGCGTGGGAGGAATCTGATTAGGAGGTAGAAAATGTGGAACTTTCGTGTTGGGACAAATATTAGGAATTGGTATTCCTGTTAAAGATTTGTACCATTTCATATCTTCTCAAGTGTATGAAAATGTTCATCATTGTGAAGGTTCTAGATAAGGCACGTAGTTTTCAAAGGTAAATACAACAACAACTACAAACACAGTGTAATTCTACGAGTTTGGGGAGGGTAACATGTATGCAGACGTACTCCTATATTTATGGGGTAGAGAGGTTGTTTCTGACCCTCGCAAACCCTCCTCCTTTATCTGTCTTGGGACCAGCAATGTGAACGAGTTCACACAGGCGGAGTTTGTCTTCAAAGGTAAATGTATCCATGAAATTAGTTAATGATGGAAATGCAAACTGTAACATAAGCTACCACTTTTCTGATTTTCCTTGTGACACTAGCATAATGCATTTGAAACCATATTTTGGGCTCTTTTTTTTTTCGTCGATTACATATTTGCACTTGCATAAACATCTTATTAGAGAACTCGTATTCACGATTCAGTGTTGCTTCGAAGATGATCAAAATACAATATTTATAACCCTCTCAGCTTCTTGATGGATTTTCAGTCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTAGTTTTATTTTGTTCTGCCTATATATTTTATATACTATTT-TCCTA-TT--T-G-GTAG---TGTAGATAGTAAGTCATGAAGTATCGCTGTTCCCTGTCTATTTTCTCGCAGGATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAGGTATTACATAATATTTCCGTTGCAACCGAATTAGACACTTAAGGTTTGATCGTCTATCAAGGTAATCATTCTTTGACATGAATCGCAGCCATCCACAGGCGTGTTGGATATCAGGCCATTTCCATACAGTAAAAGGAACAAAATAGTTGTTCATTTATGTGTTTTTTTTTCAGAAAGATACCTTGTGATACAAGGAAGATATCTTTCCTTTCTCGTTTTTCTTTTAAACTATCCATCAAAAACAGTTATAGAATAGAGAATTCAAAGTCTCTAAGATGTTGACGTTGCATGCCTACTGACTGTAACAGATCGTTTCGTTCTGCAAATAATGAAAACACTTATAATGAAAGGATGTGTAGTCATCAGACACTCTTATTCTGTGTCTTTAAGTACATAAATCTAATGCTTCAATATCTCTTCAGATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAA</genome_strand>
        <mrna_strand>CTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTCATTTCGAAATAAAGCTTTCTTCCATAACCATCCTCCACTTCGTTCCCCAATTTATGCTACACTCACTCGCATTGCCTCGAAGAAGAATGCTTCCATG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGACAAAGAGGCCAACTGCTCCTTCCATTTTGTCAACACATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATCTTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATATCTCCTGCTGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTCAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTGGTTTTATTTTGTTCTGCATATATATTCTATATAATATTTATCCTATTTGGTAGTGTAGAACTGTAGATAGTAAGTCATGAAGTATCACTATTCCTCGTTTATTTTCTCTCAGGATTCTCTTGAGGATATCTCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCGCTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-2cYhsd/sgn_ests_tomato_potato" ref_id="SGN-E328537" ref_strand="+" ref_description="SGN-E328537 [cTOC-23-G24]">
      <seq>tcttccattttctctccaaatttcactcatttgtaccaaaataaagctttcttccatagccatcttccacttcgttccccaatttatgctacactcaatcgcattgccttgaagaagaatgcttccatgtcatgcaggaattgacaaagaggctgactgctccttccattttgtcaacatatttggagagtacagtcaagcaatttcagagtttaatggcggtgatcattatatttactgaaattgcatctccaatacctttgtatggtttgcaagatttgtccatttctcctgccgaggcagtgctttattcccctgaaacaaaaactctccctagaacaggagaattagctcttagaagagctatcccagccaacacaaatatgaaaactatacaggattcgcttgaggacatatcgtacttgctcaggattccacagcgaaaaccttttggaacaatggagggtaatgtgaagaaagctcttaagattgcaacagatgaaaaggcatccatcttggctagcattccagctgaactgaaagaagagggttcagtcttgtacacatctcttgtagacggaaagggtggattacagaaacttctacagtacataaaggataaagatccagataaagtatccgtttgtcttgcatctacattggatactattgcacagatggagttgttacaggccccaggcttatcatttttgttgcctcagcagtacgtgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0161H10-7aCEF/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0161H10.1" temp_strand="+" temp_description="C12HBa0161H10.1  AC216365.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0161H10 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="157638" stop="161172"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="157938" g_stop="158066" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="129" r_length="129" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="158067" i_stop="159294" i_length="1228">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="159295" g_stop="159563" g_length="269"/>
          <reference_exon_boundary r_type="cDNA" r_start="130" r_stop="398" r_length="269" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="159564" i_stop="159669" i_length="106">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.951" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="159670" g_stop="159759" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="488" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="159760" i_stop="160181" i_length="422">
            <donor d_prob="0.816" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="160182" g_stop="160277" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="584" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="160278" i_stop="160763" i_length="486">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="160764" g_stop="160871" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="585" r_stop="692" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0161H10.1" gen_strand="+" ref_id="SGN-E328537" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="0.941" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0161H10.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E328537" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="157938" e_stop="158066"/>
          <exon e_start="159295" e_stop="159563"/>
          <exon e_start="159670" e_stop="159759"/>
          <exon e_start="160182" e_stop="160277"/>
          <exon e_start="160764" e_stop="160871"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATGGTTAGTTTAGTTCTGCTCAAAATTTAGATATTTTCATGTGTGAATTCTGTTAAAAATTTCATCATTCTTTTTGTGCGATGGCTTAATACATAAACAGACACTCGAACAAGCGGGCACTCCATCTTACAAAATGATCATCCAAATTTATTCAAAATTTATGTGTCACGTCAGCATTAGGTGTCCACGAGATAGGGCGGGGACAAATTGGAGTGTTTAGTTGTTAGCTGAGATCAAGTTGAAGTGTTTAGATGCATTGTGCCTTGTGTCATTCATTGTAGAATTATGAATAGTTCGATTGTATGATTCTACTCTATTTGTTTTCATTTATGTGATACGATTTTCTTTTTAGTCTGTTTCAAAAAGAATATCTTTTTTTTTCATATTGAGGAACAATTTACCAATTAATGACATGATTTGTAGCTACACAAATGTGTAAGATTTGTTTTAGATTGTAAGTTTCAATTGTCTTTATTCTAACTTAAACGCGGTATATCTAGTCAAACAGAACTGTTTTCTGATATTTAGTTTGGGCAAAGAATGCTGGTTCACCTCTAAAGTTTGATCTTTTACAAAATTTAAAGGACTGTTGGATCATCAAATGTAAGTCTTGCGATCATTTAGCGTGGGAGGAATCTGATTAGGAGGTAGAAAATGTGGAACTTTCGTGTTGGGACAAATATTAGGAATTGGTATTCCTGTTAAAGATTTGTACCATTTCATATCTTCTCAAGTGTATGAAAATGTTCATCATTGTGAAGGTTCTAGATAAGGCACGTAGTTTTCAAAGGTAAATACAACAACAACTACAAACACAGTGTAATTCTACGAGTTTGGGGAGGGTAACATGTATGCAGACGTACTCCTATATTTATGGGGTAGAGAGGTTGTTTCTGACCCTCGCAAACCCTCCTCCTTTATCTGTCTTGGGACCAGCAATGTGAACGAGTTCACACAGGCGGAGTTTGTCTTCAAAGGTAAATGTATCCATGAAATTAGTTAATGATGGAAATGCAAACTGTAACATAAGCTACCACTTTTCTGATTTTCCTTGTGACACTAGCATAATGCATTTGAAACCATATTTTGGGCTCTTTTTTTTTTCGTCGATTACATATTTGCACTTGCATAAACATCTTATTAGAGAACTCGTATTCACGATTCAGTGTTGCTTCGAAGATGATCAAAATACAATATTTATAACCCTCTCAGCTTCTTGATGGATTTTCAGTCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTAGTTTTATTTTGTTCTGCCTATATATTTTATATACTATTTTCCTATTTGGTAGTGTAGATAGTAAGTCATGAAGTATCGCTGTTCCCTGTCTATTTTCTCGCAGGATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAGGTATTACATAATATTTCCGTTGCAACCGAATTAGACACTTAAGGTTTGATCGTCTATCAAGGTAATCATTCTTTGACATGAATCGCAGCCATCCACAGGCGTGTTGGATATCAGGCCATTTCCATACAGTAAAAGGAACAAAATAGTTGTTCATTTATGTGTTTTTTTTTCAGAAAGATACCTTGTGATACAAGGAAGATATCTTTCCTTTCTCGTTTTTCTTTTAAACTATCCATCAAAAACAGTTATAGAATAGAGAATTCAAAGTCTCTAAGATGTTGACGTTGCATGCCTACTGACTGTAACAGATCGTTTCGTTCTGCAAATAATGAAAACACTTATAATGAAAGGATGTGTAGTCATCAGACACTCTTATTCTGTGTCTTTAAGTACATAAATCTAATGCTTCAATATCTCTTCAGATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAGGTAACATGAGACTACTTAGATTGTTTAGTTTAAAAGTACTTTAGGTTAGATGACTTCATTTTTCCCTCCAGTTTTTCACAAACTTGTATCAGTCTCTTGGTTCAATCTCTACTATCTACATTATGACCCCAAAAGAGGAAAAAAAAAAAAGAACTGGGAACTGTTATATATGTGCTCCAACCAATATCAGTGATGCCTATCTGATGCAGGAGCACATCTGTTGTTACTTTACAATATTGTTTTGCTGCAGAATTTGTGAAATCTTATGCACTTGTGATAGTAACATTGCCGGTTTGCATGATCGTATTCCAGTAATACTCTTTATCATGCTTGAATGTCTGATATGGTGTCAACGAAACCAGTGAGGATCTCAAGGATTGATGTTTTCACAGACTTCTTAAATTTCTTAAGCAATCATCTGAACAGATGATATCTTTAAACACAAACCTTACTGCAATCAAGATGAATTTCTTTTTATCTTGTCAGGGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAAAAAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG</genome_strand>
        <mrna_strand>TCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAG..........................................................................................................GATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................ATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>309</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="11204" PGL_stop="14096"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="11204" e_stop="11354"/>
            <exon e_start="11698" e_stop="11793"/>
            <exon e_start="12293" e_stop="12821"/>
            <exon e_start="12922" e_stop="13280"/>
            <exon e_start="13621" e_stop="14048"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.759" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11204" e_stop="11354" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11698" e_stop="11793" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.970">
            <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12293" e_stop="12821" e_length="529"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.759">
            <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12922" e_stop="13280" e_length="359"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="13621" e_stop="14048" e_length="428"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11204" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11220" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11220" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12985"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11230" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314273" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295538" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265975" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346851" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319867" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11236" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11236" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11238" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697283" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11238" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326903" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11239" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11239" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11241" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11243" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11243" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11244" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11244" stop="11354"/>
              <exon start="11698" stop="11757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11245" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11245" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279611" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11247" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11247" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11250" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11250" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265612" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11256" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11258" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11265" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11267" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11267" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11270" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11270" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11275" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11311" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718416" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11709" stop="11793"/>
              <exon start="12293" stop="12681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11709" stop="11793"/>
              <exon start="12293" stop="12599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265496" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11710" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11710" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11715" stop="11793"/>
              <exon start="12293" stop="12664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11718" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11745" stop="11793"/>
              <exon start="12293" stop="12662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11754" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12303" stop="12821"/>
              <exon start="12922" stop="13065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12378" stop="12821"/>
              <exon start="12922" stop="13159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12406" stop="12821"/>
              <exon start="12922" stop="13148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12445" stop="12821"/>
              <exon start="12922" stop="13087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12546" stop="12821"/>
              <exon start="12922" stop="13229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12549" stop="12821"/>
              <exon start="12922" stop="13235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12549" stop="12821"/>
              <exon start="12922" stop="13137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12748" stop="12821"/>
              <exon start="12922" stop="13280"/>
              <exon start="13621" stop="13724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12807" stop="12821"/>
              <exon start="12922" stop="13280"/>
              <exon start="13621" stop="13887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12942" stop="13280"/>
              <exon start="13621" stop="14048"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12942" stop="13280"/>
              <exon start="13621" stop="13718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12978" stop="13280"/>
              <exon start="13621" stop="13934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288365" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12979" stop="13280"/>
              <exon start="13621" stop="13849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12989" stop="13280"/>
              <exon start="13621" stop="13829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13049" stop="13280"/>
              <exon start="13621" stop="13909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415960" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAATTCTTACTACACACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG : GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG : AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG : GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG : GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAGAATCGAGCGCTTACCAACACGCCAACAATTATAGCGCTCACAACTTTAAGTCCACCCAACAAGCGTCATGTTCGATCAATGACTCACTCAACAATTTCCAGTATGAATGATCATGTGAAT</gDNA_template>
            <first_frame> Q  I  L  T  T  H  T  I  S  P  K  I  I  F  *  N  L  H  L  T  I  F  S  K  Q  K  S  F  S  *  Y  N  H  G  S  S  S  C  C  I  A  S  F  Y  F  L  Y  S  K  G   : G  E  N  *  C  I  F  E  G  F  E  S  L  W  N  F  S  L  *  P  C  *  I  *  F  W  L  F  I  Q  N  Q   : E  R  K  K  V  I  P  R  S  Y  *  S  R  D  N  G  C  I  S  R  C  N  E  Y  P  C  D  R  K  E  N  L  K  K  R  L  C  S  N  H  W  S  V  F  R  T  R  T  S  Y  S  K  S  S  G  *  D  R  E  M  A  C  N  Y  G  M  *  R  L  S  *  S  *  K  S  S  K  I  S  R  D  A  *  G  E  L  Y  N  N  A  F  R  P  C  I  A  *  Q  R  Q  T  I  C  R  *  L  *  E  I  R  Q  S  S  *  C  I  G  L  Q  C  S  C  L  S  A  Y  R  E  R  A  F  V  Y  S  *  R  I  *  A  *  C  W  D  *  P  S  W  S  F  P  S  F  E  I  V  D  *  *  F  E  A  V  *  L  P  F  K  E  T  H  H  C  W  F  D  Y  R :   K  H  K  H  I  G  W  K  C  T  S  K  G  Q  P  R  G  L  E  G  F  S  K  G  A  R  W  T  *  Q  L  S  H  D  *  R  W  *  L  *  W  C  Q  S  L  Q  R  Q  Q  G  L  Q  Y  A  H  Y  A  G  I  P  *  T  I  P  R  R  D  W  H  H  I  C  L  P  I  P  W  L  H  R  D  N  R  A  I  Q  G  A  Y  P  L  V  *  A  P  F  P  S  I  P  E  V  Y  H  Q  R  I  R  L  R  G  R  I  W  K  E  T  C  T   : G  C  *  *  S  K  S  Y  K  I  R  C  V  L  E  L  E  Q  E  L  F  L  L  *  E  P  V  V  R  R  S  *  *  R  *  E  S  A  *  S  V  G  S  Q  *  E  T  R  G  I  G  L  D  F  L  L  I  E  F  N  H  H  Q  D  E  H  E  K  G  V  D  E  G  E  F  E  S  S  L  F  C  C  S  *  K  V  V  T  S  *  N  F  *  V  R  N  K  Y  H  S  S  F  *  N  R  A  L  T  N  T  P  T  I  I  A  L  T  T  L  S  P  P  N  K  R  H  V  R  S  M  T  H  S  T  I  S  S  M  N  D  H  V  N </first_frame>
            <second_frame>  K  F  L  L  H  T  L  S  V  Q  K  S  F  F  K  I  S  I  L  Q  F  F  Q  N  K  N  H  F  P  N  I  I  M  A  L  Q  A  A  A  L  L  P  S  T  F  S  I  P  K  E  :  G  K  T  S  A  S  L  K  D  S  S  L  F  G  I  S  L  S  D  H  V  K  S  D  F  G  S  S  F  K  I  K  :  S  G  R  K  S  S  L  G  A  I  R  A  E  T  M  V  A  S  P  G  V  T  S  T  P  V  T  G  K  K  T  L  R  K  G  C  V  V  I  T  G  A  S  S  G  L  G  L  A  T  A  K  A  L  A  E  T  G  K  W  H  V  I  M  A  C  R  D  F  L  K  A  E  R  A  A  K  S  A  G  M  P  K  E  N  Y  T  I  M  H  L  D  L  A  S  L  D  S  V  R  Q  F  V  D  N  F  R  R  S  G  N  P  L  D  V  L  V  C  N  A  A  V  Y  Q  P  T  A  K  E  P  S  F  T  A  E  G  F  E  L  S  V  G  T  N  H  L  G  H  F  L  L  S  R  L  L  I  D  D  L  K  Q  S  D  Y  P  S  K  R  L  I  I  V  G  S  I  T   : G  N  T  N  T  L  A  G  N  V  P  P  K  A  N  L  G  D  L  R  G  L  A  R  G  L  D  G  L  N  S  S  A  M  I  D  G  G  D  F  D  G  A  K  A  Y  K  D  S  K  V  C  N  M  L  T  M  Q  E  F  H  R  R  Y  H  E  E  T  G  I  T  F  A  S  L  Y  P  G  C  I  A  T  T  G  L  F  R  E  H  I  P  L  F  R  L  L  F  P  P  F  Q  K  F  I  T  K  G  F  V  S  E  A  E  S  G  K  R  L  A  Q  :  V  V  S  D  P  S  L  T  K  S  G  V  Y  W  S  W  N  K  N  S  S  S  F  E  N  Q  L  S  E  E  A  S  D  V  E  K  A  R  K  V  W  E  V  S  E  K  L  V  G  L  A  *  I  F  C  *  L  S  S  T  I  T  K  T  N  T  K  K  E  L  M  K  E  N  L  N  R  V  C  F  V  V  V  K  K  L  S  L  R  K  I  F  E  L  G  I  N  I  I  H  P  F  R  I  E  R  L  P  T  R  Q  Q  L  *  R  S  Q  L  *  V  H  P  T  S  V  M  F  D  Q  *  L  T  Q  Q  F  P  V  *  M  I  M  *   </second_frame>
            <third_frame>   N  S  Y  Y  T  H  Y  Q  S  K  N  H  F  L  K  S  P  S  Y  N  F  F  K  T  K  I  I  F  L  I  *  S  W  L  F  K  L  L  H  C  F  L  L  L  S  L  F  Q  R  R :   G  K  L  V  H  L  *  R  I  R  V  S  L  E  F  L  S  L  T  M  L  N  L  I  L  A  L  H  S  K  S  R :   A  E  E  S  H  P  S  E  L  L  E  P  R  Q  W  L  H  L  P  V  *  R  V  P  L  *  Q  E  R  K  P  *  E  K  V  V  *  *  S  L  E  R  L  Q  D  *  D  *  L  Q  Q  K  L  W  L  R  Q  G  N  G  M  *  L  W  H  V  E  T  F  L  K  L  K  E  Q  Q  N  Q  Q  G  C  L  R  R  I  I  Q  *  C  I  *  T  L  H  R  L  T  A  S  D  N  L  S  I  T  L  G  D  Q  A  I  L  L  M  Y  W  F  A  M  Q  L  F  I  S  L  P  R  K  S  L  R  L  Q  L  K  D  L  S  L  V  L  G  L  T  I  L  V  I  S  F  F  R  D  C  *  L  M  I  *  S  S  L  I  T  L  Q  R  D  S  S  L  L  V  R  L  Q  :  E  T  Q  T  H  W  L  E  M  Y  L  Q  R  P  T  S  G  T  *  G  V  *  Q  G  G  S  M  D  L  T  A  Q  P  *  L  T  V  V  T  L  M  V  P  K  L  T  K  T  A  R  F  A  I  C  S  L  C  R  N  S  I  D  D  T  T  K  R  L  A  S  H  L  P  P  Y  T  L  A  A  S  R  Q  Q  G  Y  S  G  S  I  S  P  C  L  G  S  F  S  L  H  S  R  S  L  S  P  K  D  S  S  P  R  Q  N  L  E  R  D  L  H  R :   L  L  V  I  Q  V  L  Q  N  Q  V  C  T  G  A  G  T  R  T  L  P  P  L  R  T  S  C  Q  K  K  L  V  T  L  R  K  R  V  K  C  G  K  S  V  R  N  S  W  D  W  L  R  F  F  A  D  *  V  Q  P  S  P  R  R  T  R  K  R  S  *  *  R  R  I  *  I  E  S  V  L  L  *  L  K  S  C  H  F  V  K  F  L  S  *  E  *  I  S  F  I  L  L  E  S  S  A  Y  Q  H  A  N  N  Y  S  A  H  N  F  K  S  T  Q  Q  A  S  C  S  I  N  D  S  L  N  N  F  Q  Y  E  *  S  C  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11205" stop="11354"/>
                    <exon start="11698" stop="11793"/>
                    <exon start="12293" stop="12821"/>
                    <exon start="12922" stop="13280"/>
                    <exon start="13621" stop="13776"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1287</number_coding_nucleotides>
                  <number_encoded_amino_acids>429</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFLLHTLSVQKSFFKISILQFFQNKNHFPNIIMALQAAALLPSTFSIPKEGKTSASLKDSSLFGISLSDHVKSDFGSSFKIKSGRKSSLGAIRAETMVASPGVTSTPVTGKKTLRKGCVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMPKENYTIMHLDLASLDSVRQFVDNFRRSGNPLDVLVCNAAVYQPTAKEPSFTAEGFELSVGTNHLGHFLLSRLLIDDLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLARGLDGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKFITKGFVSEAESGKRLAQVVSDPSLTKSGVYWSWNKNSSSFENQLSEEASDVEKARKVWEVSEKLVGLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="11204" e_stop="11354"/>
            <exon e_start="11698" e_stop="11793"/>
            <exon e_start="12293" e_stop="12821"/>
            <exon e_start="12922" e_stop="13280"/>
            <exon e_start="13621" e_stop="13934"/>
            <exon e_start="14067" e_stop="14096"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.759" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.987"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11204" e_stop="11354" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11698" e_stop="11793" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.970">
            <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12293" e_stop="12821" e_length="529"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.759">
            <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12922" e_stop="13280" e_length="359"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="13621" e_stop="13934" e_length="314"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="13935" i_stop="14066" i_length="132"/>
          </intron>
          <exon e_serial="6" e_score="0.667">
            <gDNA_exon_boundary e_start="14067" e_stop="14096" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11204" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11220" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11220" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12985"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11230" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314273" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295538" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265975" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346851" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319867" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11236" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11236" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11238" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697283" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11238" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326903" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11239" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11239" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11241" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11243" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11243" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11244" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11244" stop="11354"/>
              <exon start="11698" stop="11757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11245" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11245" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279611" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11247" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11247" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11250" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11250" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265612" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11256" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11258" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11265" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11267" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11267" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11270" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11270" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11275" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11311" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718416" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11709" stop="11793"/>
              <exon start="12293" stop="12681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11709" stop="11793"/>
              <exon start="12293" stop="12599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265496" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11710" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11710" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11715" stop="11793"/>
              <exon start="12293" stop="12664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11718" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11745" stop="11793"/>
              <exon start="12293" stop="12662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11754" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12303" stop="12821"/>
              <exon start="12922" stop="13065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12378" stop="12821"/>
              <exon start="12922" stop="13159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12406" stop="12821"/>
              <exon start="12922" stop="13148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12445" stop="12821"/>
              <exon start="12922" stop="13087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12546" stop="12821"/>
              <exon start="12922" stop="13229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12549" stop="12821"/>
              <exon start="12922" stop="13235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12549" stop="12821"/>
              <exon start="12922" stop="13137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12748" stop="12821"/>
              <exon start="12922" stop="13280"/>
              <exon start="13621" stop="13724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12807" stop="12821"/>
              <exon start="12922" stop="13280"/>
              <exon start="13621" stop="13887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12942" stop="13280"/>
              <exon start="13621" stop="13718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12978" stop="13280"/>
              <exon start="13621" stop="13934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288365" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12979" stop="13280"/>
              <exon start="13621" stop="13849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12989" stop="13280"/>
              <exon start="13621" stop="13829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13049" stop="13280"/>
              <exon start="13621" stop="13909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415960" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13208" stop="13280"/>
              <exon start="13621" stop="13934"/>
              <exon start="14067" stop="14096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747193" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAATTCTTACTACACACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG : GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG : AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG : GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG : GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAGAATCGA : ACATAAAAACAAAAATTAGCAACAAACAAC</gDNA_template>
            <first_frame> Q  I  L  T  T  H  T  I  S  P  K  I  I  F  *  N  L  H  L  T  I  F  S  K  Q  K  S  F  S  *  Y  N  H  G  S  S  S  C  C  I  A  S  F  Y  F  L  Y  S  K  G   : G  E  N  *  C  I  F  E  G  F  E  S  L  W  N  F  S  L  *  P  C  *  I  *  F  W  L  F  I  Q  N  Q   : E  R  K  K  V  I  P  R  S  Y  *  S  R  D  N  G  C  I  S  R  C  N  E  Y  P  C  D  R  K  E  N  L  K  K  R  L  C  S  N  H  W  S  V  F  R  T  R  T  S  Y  S  K  S  S  G  *  D  R  E  M  A  C  N  Y  G  M  *  R  L  S  *  S  *  K  S  S  K  I  S  R  D  A  *  G  E  L  Y  N  N  A  F  R  P  C  I  A  *  Q  R  Q  T  I  C  R  *  L  *  E  I  R  Q  S  S  *  C  I  G  L  Q  C  S  C  L  S  A  Y  R  E  R  A  F  V  Y  S  *  R  I  *  A  *  C  W  D  *  P  S  W  S  F  P  S  F  E  I  V  D  *  *  F  E  A  V  *  L  P  F  K  E  T  H  H  C  W  F  D  Y  R :   K  H  K  H  I  G  W  K  C  T  S  K  G  Q  P  R  G  L  E  G  F  S  K  G  A  R  W  T  *  Q  L  S  H  D  *  R  W  *  L  *  W  C  Q  S  L  Q  R  Q  Q  G  L  Q  Y  A  H  Y  A  G  I  P  *  T  I  P  R  R  D  W  H  H  I  C  L  P  I  P  W  L  H  R  D  N  R  A  I  Q  G  A  Y  P  L  V  *  A  P  F  P  S  I  P  E  V  Y  H  Q  R  I  R  L  R  G  R  I  W  K  E  T  C  T   : G  C  *  *  S  K  S  Y  K  I  R  C  V  L  E  L  E  Q  E  L  F  L  L  *  E  P  V  V  R  R  S  *  *  R  *  E  S  A  *  S  V  G  S  Q  *  E  T  R  G  I  G  L  D  F  L  L  I  E  F  N  H  H  Q  D  E  H  E  K  G  V  D  E  G  E  F  E  S  S  L  F  C  C  S  *  K  V  V  T  S  *  N  F  *  V  R  N  K  Y  H  S  S  F  *  N  R  :  T  *  K  Q  K  L  A  T  N  N </first_frame>
            <second_frame>  K  F  L  L  H  T  L  S  V  Q  K  S  F  F  K  I  S  I  L  Q  F  F  Q  N  K  N  H  F  P  N  I  I  M  A  L  Q  A  A  A  L  L  P  S  T  F  S  I  P  K  E  :  G  K  T  S  A  S  L  K  D  S  S  L  F  G  I  S  L  S  D  H  V  K  S  D  F  G  S  S  F  K  I  K  :  S  G  R  K  S  S  L  G  A  I  R  A  E  T  M  V  A  S  P  G  V  T  S  T  P  V  T  G  K  K  T  L  R  K  G  C  V  V  I  T  G  A  S  S  G  L  G  L  A  T  A  K  A  L  A  E  T  G  K  W  H  V  I  M  A  C  R  D  F  L  K  A  E  R  A  A  K  S  A  G  M  P  K  E  N  Y  T  I  M  H  L  D  L  A  S  L  D  S  V  R  Q  F  V  D  N  F  R  R  S  G  N  P  L  D  V  L  V  C  N  A  A  V  Y  Q  P  T  A  K  E  P  S  F  T  A  E  G  F  E  L  S  V  G  T  N  H  L  G  H  F  L  L  S  R  L  L  I  D  D  L  K  Q  S  D  Y  P  S  K  R  L  I  I  V  G  S  I  T   : G  N  T  N  T  L  A  G  N  V  P  P  K  A  N  L  G  D  L  R  G  L  A  R  G  L  D  G  L  N  S  S  A  M  I  D  G  G  D  F  D  G  A  K  A  Y  K  D  S  K  V  C  N  M  L  T  M  Q  E  F  H  R  R  Y  H  E  E  T  G  I  T  F  A  S  L  Y  P  G  C  I  A  T  T  G  L  F  R  E  H  I  P  L  F  R  L  L  F  P  P  F  Q  K  F  I  T  K  G  F  V  S  E  A  E  S  G  K  R  L  A  Q  :  V  V  S  D  P  S  L  T  K  S  G  V  Y  W  S  W  N  K  N  S  S  S  F  E  N  Q  L  S  E  E  A  S  D  V  E  K  A  R  K  V  W  E  V  S  E  K  L  V  G  L  A  *  I  F  C  *  L  S  S  T  I  T  K  T  N  T  K  K  E  L  M  K  E  N  L  N  R  V  C  F  V  V  V  K  K  L  S  L  R  K  I  F  E  L  G  I  N  I  I  H  P  F  R  I  E :   H  K  N  K  N  *  Q  Q  T   </second_frame>
            <third_frame>   N  S  Y  Y  T  H  Y  Q  S  K  N  H  F  L  K  S  P  S  Y  N  F  F  K  T  K  I  I  F  L  I  *  S  W  L  F  K  L  L  H  C  F  L  L  L  S  L  F  Q  R  R :   G  K  L  V  H  L  *  R  I  R  V  S  L  E  F  L  S  L  T  M  L  N  L  I  L  A  L  H  S  K  S  R :   A  E  E  S  H  P  S  E  L  L  E  P  R  Q  W  L  H  L  P  V  *  R  V  P  L  *  Q  E  R  K  P  *  E  K  V  V  *  *  S  L  E  R  L  Q  D  *  D  *  L  Q  Q  K  L  W  L  R  Q  G  N  G  M  *  L  W  H  V  E  T  F  L  K  L  K  E  Q  Q  N  Q  Q  G  C  L  R  R  I  I  Q  *  C  I  *  T  L  H  R  L  T  A  S  D  N  L  S  I  T  L  G  D  Q  A  I  L  L  M  Y  W  F  A  M  Q  L  F  I  S  L  P  R  K  S  L  R  L  Q  L  K  D  L  S  L  V  L  G  L  T  I  L  V  I  S  F  F  R  D  C  *  L  M  I  *  S  S  L  I  T  L  Q  R  D  S  S  L  L  V  R  L  Q  :  E  T  Q  T  H  W  L  E  M  Y  L  Q  R  P  T  S  G  T  *  G  V  *  Q  G  G  S  M  D  L  T  A  Q  P  *  L  T  V  V  T  L  M  V  P  K  L  T  K  T  A  R  F  A  I  C  S  L  C  R  N  S  I  D  D  T  T  K  R  L  A  S  H  L  P  P  Y  T  L  A  A  S  R  Q  Q  G  Y  S  G  S  I  S  P  C  L  G  S  F  S  L  H  S  R  S  L  S  P  K  D  S  S  P  R  Q  N  L  E  R  D  L  H  R :   L  L  V  I  Q  V  L  Q  N  Q  V  C  T  G  A  G  T  R  T  L  P  P  L  R  T  S  C  Q  K  K  L  V  T  L  R  K  R  V  K  C  G  K  S  V  R  N  S  W  D  W  L  R  F  F  A  D  *  V  Q  P  S  P  R  R  T  R  K  R  S  *  *  R  R  I  *  I  E  S  V  L  L  *  L  K  S  C  H  F  V  K  F  L  S  *  E  *  I  S  F  I  L  L  E  S   : N  I  K  T  K  I  S  N  K  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11205" stop="11354"/>
                    <exon start="11698" stop="11793"/>
                    <exon start="12293" stop="12821"/>
                    <exon start="12922" stop="13280"/>
                    <exon start="13621" stop="13776"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1287</number_coding_nucleotides>
                  <number_encoded_amino_acids>429</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFLLHTLSVQKSFFKISILQFFQNKNHFPNIIMALQAAALLPSTFSIPKEGKTSASLKDSSLFGISLSDHVKSDFGSSFKIKSGRKSSLGAIRAETMVASPGVTSTPVTGKKTLRKGCVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMPKENYTIMHLDLASLDSVRQFVDNFRRSGNPLDVLVCNAAVYQPTAKEPSFTAEGFELSVGTNHLGHFLLSRLLIDDLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLARGLDGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKFITKGFVSEAESGKRLAQVVSDPSLTKSGVYWSWNKNSSSFENQLSEEASDVEKARKVWEVSEKLVGLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="11204" e_stop="11354"/>
            <exon e_start="11698" e_stop="11793"/>
            <exon e_start="12293" e_stop="12821"/>
            <exon e_start="12922" e_stop="13280"/>
            <exon e_start="13621" e_stop="13928"/>
            <exon e_start="14066" e_stop="14081"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.970" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.759" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.812"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="11204" e_stop="11354" e_length="151"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="11355" i_stop="11697" i_length="343"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="11698" e_stop="11793" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.970">
            <gDNA_intron_boundary i_start="11794" i_stop="12292" i_length="499"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12293" e_stop="12821" e_length="529"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.759">
            <gDNA_intron_boundary i_start="12822" i_stop="12921" i_length="100"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12922" e_stop="13280" e_length="359"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="13281" i_stop="13620" i_length="340"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="13621" e_stop="13928" e_length="308"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="13929" i_stop="14065" i_length="137"/>
          </intron>
          <exon e_serial="6" e_score="0.812">
            <gDNA_exon_boundary e_start="14066" e_stop="14081" e_length="16"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11204" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725756" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11217" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13280"/>
              <exon start="13621" stop="13928"/>
              <exon start="14066" stop="14081"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745474" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11220" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747194" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11220" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12985"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11230" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320285" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13084"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E740113" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12589"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314273" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11232" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12413"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E313556" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738407" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E295538" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12570"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312059" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11233" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265975" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13045"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E738327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12789"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E346851" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11234" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319867" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11236" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12651"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11236" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265614" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11238" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12939"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697283" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11238" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326903" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11239" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12934"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729260" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11239" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11241" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12788"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E333683" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11243" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E321508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11243" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12490"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11244" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266300" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11244" stop="11354"/>
              <exon start="11698" stop="11757"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E320526" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11245" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268154" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11245" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12608"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279611" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11247" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E572987" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11247" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12482"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E319157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11250" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12655"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266467" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11250" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12574"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265612" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11256" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12773"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729106" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11258" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474000" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12941"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461125" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11259" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12790"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11265" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11267" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12974"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E611056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11267" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462181" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11270" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E461928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11270" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11275" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12787"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E402871" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11311" stop="11354"/>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12811"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718416" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11698" stop="11793"/>
              <exon start="12293" stop="12529"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317701" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11709" stop="11793"/>
              <exon start="12293" stop="12681"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265498" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11709" stop="11793"/>
              <exon start="12293" stop="12599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265496" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11710" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13136"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459337" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11710" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13012"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11715" stop="11793"/>
              <exon start="12293" stop="12664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268053" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11718" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="13044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E575743" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11745" stop="11793"/>
              <exon start="12293" stop="12662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265765" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="11754" stop="11793"/>
              <exon start="12293" stop="12821"/>
              <exon start="12922" stop="12952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477411" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12303" stop="12821"/>
              <exon start="12922" stop="13065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12378" stop="12821"/>
              <exon start="12922" stop="13159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E459734" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12406" stop="12821"/>
              <exon start="12922" stop="13148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E615778" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12445" stop="12821"/>
              <exon start="12922" stop="13087"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472314" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12546" stop="12821"/>
              <exon start="12922" stop="13229"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573280" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12549" stop="12821"/>
              <exon start="12922" stop="13235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415959" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12549" stop="12821"/>
              <exon start="12922" stop="13137"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438028" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12748" stop="12821"/>
              <exon start="12922" stop="13280"/>
              <exon start="13621" stop="13724"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268051" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12807" stop="12821"/>
              <exon start="12922" stop="13280"/>
              <exon start="13621" stop="13887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12942" stop="13280"/>
              <exon start="13621" stop="13718"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268380" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12979" stop="13280"/>
              <exon start="13621" stop="13849"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E469979" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12989" stop="13280"/>
              <exon start="13621" stop="13829"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288515" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13049" stop="13280"/>
              <exon start="13621" stop="13909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415960" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAAATTCTTACTACACACACTATCAGTCCAAAAATCATTTTTTAAAATCTCCATCTTACAATTTTTTCAAAACAAAAATCATTTTCCTAATATAATCATGGCTCTTCAAGCTGCTGCATTGCTTCCTTCTACTTTCTCTATTCCAAAGGAG : GGGAAAACTAGTGCATCTTTGAAGGATTCGAGTCTCTTTGGAATTTCTCTCTCTGACCATGTTAAATCTGATTTTGGCTCTTCATTCAAAATCAAG : AGCGGAAGAAAGTCATCCCTCGGAGCTATTAGAGCCGAGACAATGGTTGCATCTCCCGGTGTAACGAGTACCCCTGTGACAGGAAAGAAAACCTTAAGAAAAGGTTGTGTAGTAATCACTGGAGCGTCTTCAGGACTAGGACTAGCTACAGCAAAAGCTCTGGCTGAGACAGGGAAATGGCATGTAATTATGGCATGTAGAGACTTTCTTAAAGCTGAAAGAGCAGCAAAATCAGCAGGGATGCCTAAGGAGAATTATACAATAATGCATTTAGACCTTGCATCGCTTGACAGCGTCAGACAATTTGTCGATAACTTTAGGAGATCAGGCAATCCTCTTGATGTATTGGTTTGCAATGCAGCTGTTTATCAGCCTACCGCGAAAGAGCCTTCGTTTACAGCTGAAGGATTTGAGCTTAGTGTTGGGACTAACCATCTTGGTCATTTCCTTCTTTCGAGATTGTTGATTGATGATTTGAAGCAGTCTGATTACCCTTCAAAGAGACTCATCATTGTTGGTTCGATTACAG : GAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAG : GTTGTTAGTGATCCAAGTCTTACAAAATCAGGTGTGTACTGGAGCTGGAACAAGAACTCTTCCTCCTTTGAGAACCAGTTGTCAGAAGAAGCTAGTGACGTTGAGAAAGCGCGTAAAGTGTGGGAAGTCAGTGAGAAACTCGTGGGATTGGCTTAGATTTTTTGCTGATTGAGTTCAACCATCACCAAGACGAACACGAAAAAGGAGTTGATGAAGGAGAATTTGAATCGAGTCTGTTTTGTTGTAGTTAAAAAGTTGTCACTTCGTAAAATTTTTGAGTTAGGAATAAATATCATTCATCCTTTTAG : TACATAAAAACAAAAA</gDNA_template>
            <first_frame> Q  I  L  T  T  H  T  I  S  P  K  I  I  F  *  N  L  H  L  T  I  F  S  K  Q  K  S  F  S  *  Y  N  H  G  S  S  S  C  C  I  A  S  F  Y  F  L  Y  S  K  G   : G  E  N  *  C  I  F  E  G  F  E  S  L  W  N  F  S  L  *  P  C  *  I  *  F  W  L  F  I  Q  N  Q   : E  R  K  K  V  I  P  R  S  Y  *  S  R  D  N  G  C  I  S  R  C  N  E  Y  P  C  D  R  K  E  N  L  K  K  R  L  C  S  N  H  W  S  V  F  R  T  R  T  S  Y  S  K  S  S  G  *  D  R  E  M  A  C  N  Y  G  M  *  R  L  S  *  S  *  K  S  S  K  I  S  R  D  A  *  G  E  L  Y  N  N  A  F  R  P  C  I  A  *  Q  R  Q  T  I  C  R  *  L  *  E  I  R  Q  S  S  *  C  I  G  L  Q  C  S  C  L  S  A  Y  R  E  R  A  F  V  Y  S  *  R  I  *  A  *  C  W  D  *  P  S  W  S  F  P  S  F  E  I  V  D  *  *  F  E  A  V  *  L  P  F  K  E  T  H  H  C  W  F  D  Y  R :   K  H  K  H  I  G  W  K  C  T  S  K  G  Q  P  R  G  L  E  G  F  S  K  G  A  R  W  T  *  Q  L  S  H  D  *  R  W  *  L  *  W  C  Q  S  L  Q  R  Q  Q  G  L  Q  Y  A  H  Y  A  G  I  P  *  T  I  P  R  R  D  W  H  H  I  C  L  P  I  P  W  L  H  R  D  N  R  A  I  Q  G  A  Y  P  L  V  *  A  P  F  P  S  I  P  E  V  Y  H  Q  R  I  R  L  R  G  R  I  W  K  E  T  C  T   : G  C  *  *  S  K  S  Y  K  I  R  C  V  L  E  L  E  Q  E  L  F  L  L  *  E  P  V  V  R  R  S  *  *  R  *  E  S  A  *  S  V  G  S  Q  *  E  T  R  G  I  G  L  D  F  L  L  I  E  F  N  H  H  Q  D  E  H  E  K  G  V  D  E  G  E  F  E  S  S  L  F  C  C  S  *  K  V  V  T  S  *  N  F  *  V  R  N  K  Y  H  S  S  F  *  :  Y  I  K  T  K  </first_frame>
            <second_frame>  K  F  L  L  H  T  L  S  V  Q  K  S  F  F  K  I  S  I  L  Q  F  F  Q  N  K  N  H  F  P  N  I  I  M  A  L  Q  A  A  A  L  L  P  S  T  F  S  I  P  K  E  :  G  K  T  S  A  S  L  K  D  S  S  L  F  G  I  S  L  S  D  H  V  K  S  D  F  G  S  S  F  K  I  K  :  S  G  R  K  S  S  L  G  A  I  R  A  E  T  M  V  A  S  P  G  V  T  S  T  P  V  T  G  K  K  T  L  R  K  G  C  V  V  I  T  G  A  S  S  G  L  G  L  A  T  A  K  A  L  A  E  T  G  K  W  H  V  I  M  A  C  R  D  F  L  K  A  E  R  A  A  K  S  A  G  M  P  K  E  N  Y  T  I  M  H  L  D  L  A  S  L  D  S  V  R  Q  F  V  D  N  F  R  R  S  G  N  P  L  D  V  L  V  C  N  A  A  V  Y  Q  P  T  A  K  E  P  S  F  T  A  E  G  F  E  L  S  V  G  T  N  H  L  G  H  F  L  L  S  R  L  L  I  D  D  L  K  Q  S  D  Y  P  S  K  R  L  I  I  V  G  S  I  T   : G  N  T  N  T  L  A  G  N  V  P  P  K  A  N  L  G  D  L  R  G  L  A  R  G  L  D  G  L  N  S  S  A  M  I  D  G  G  D  F  D  G  A  K  A  Y  K  D  S  K  V  C  N  M  L  T  M  Q  E  F  H  R  R  Y  H  E  E  T  G  I  T  F  A  S  L  Y  P  G  C  I  A  T  T  G  L  F  R  E  H  I  P  L  F  R  L  L  F  P  P  F  Q  K  F  I  T  K  G  F  V  S  E  A  E  S  G  K  R  L  A  Q  :  V  V  S  D  P  S  L  T  K  S  G  V  Y  W  S  W  N  K  N  S  S  S  F  E  N  Q  L  S  E  E  A  S  D  V  E  K  A  R  K  V  W  E  V  S  E  K  L  V  G  L  A  *  I  F  C  *  L  S  S  T  I  T  K  T  N  T  K  K  E  L  M  K  E  N  L  N  R  V  C  F  V  V  V  K  K  L  S  L  R  K  I  F  E  L  G  I  N  I  I  H  P  F  S :   T  *  K  Q  K </second_frame>
            <third_frame>   N  S  Y  Y  T  H  Y  Q  S  K  N  H  F  L  K  S  P  S  Y  N  F  F  K  T  K  I  I  F  L  I  *  S  W  L  F  K  L  L  H  C  F  L  L  L  S  L  F  Q  R  R :   G  K  L  V  H  L  *  R  I  R  V  S  L  E  F  L  S  L  T  M  L  N  L  I  L  A  L  H  S  K  S  R :   A  E  E  S  H  P  S  E  L  L  E  P  R  Q  W  L  H  L  P  V  *  R  V  P  L  *  Q  E  R  K  P  *  E  K  V  V  *  *  S  L  E  R  L  Q  D  *  D  *  L  Q  Q  K  L  W  L  R  Q  G  N  G  M  *  L  W  H  V  E  T  F  L  K  L  K  E  Q  Q  N  Q  Q  G  C  L  R  R  I  I  Q  *  C  I  *  T  L  H  R  L  T  A  S  D  N  L  S  I  T  L  G  D  Q  A  I  L  L  M  Y  W  F  A  M  Q  L  F  I  S  L  P  R  K  S  L  R  L  Q  L  K  D  L  S  L  V  L  G  L  T  I  L  V  I  S  F  F  R  D  C  *  L  M  I  *  S  S  L  I  T  L  Q  R  D  S  S  L  L  V  R  L  Q  :  E  T  Q  T  H  W  L  E  M  Y  L  Q  R  P  T  S  G  T  *  G  V  *  Q  G  G  S  M  D  L  T  A  Q  P  *  L  T  V  V  T  L  M  V  P  K  L  T  K  T  A  R  F  A  I  C  S  L  C  R  N  S  I  D  D  T  T  K  R  L  A  S  H  L  P  P  Y  T  L  A  A  S  R  Q  Q  G  Y  S  G  S  I  S  P  C  L  G  S  F  S  L  H  S  R  S  L  S  P  K  D  S  S  P  R  Q  N  L  E  R  D  L  H  R :   L  L  V  I  Q  V  L  Q  N  Q  V  C  T  G  A  G  T  R  T  L  P  P  L  R  T  S  C  Q  K  K  L  V  T  L  R  K  R  V  K  C  G  K  S  V  R  N  S  W  D  W  L  R  F  F  A  D  *  V  Q  P  S  P  R  R  T  R  K  R  S  *  *  R  R  I  *  I  E  S  V  L  L  *  L  K  S  C  H  F  V  K  F  L  S  *  E  *  I  S  F  I  L  L   : V  H  K  N  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="11205" stop="11354"/>
                    <exon start="11698" stop="11793"/>
                    <exon start="12293" stop="12821"/>
                    <exon start="12922" stop="13280"/>
                    <exon start="13621" stop="13776"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1287</number_coding_nucleotides>
                  <number_encoded_amino_acids>429</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFLLHTLSVQKSFFKISILQFFQNKNHFPNIIMALQAAALLPSTFSIPKEGKTSASLKDSSLFGISLSDHVKSDFGSSFKIKSGRKSSLGAIRAETMVASPGVTSTPVTGKKTLRKGCVVITGASSGLGLATAKALAETGKWHVIMACRDFLKAERAAKSAGMPKENYTIMHLDLASLDSVRQFVDNFRRSGNPLDVLVCNAAVYQPTAKEPSFTAEGFELSVGTNHLGHFLLSRLLIDDLKQSDYPSKRLIIVGSITGNTNTLAGNVPPKANLGDLRGLARGLDGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKFITKGFVSEAESGKRLAQVVSDPSLTKSGVYWSWNKNSSSFENQLSEEASDVEKARKVWEVSEKLVGLA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="12921" e_stop="13409"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="12921" e_stop="13409" e_length="489"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12921" stop="13409"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E725605" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAAACACAAACACATTGGCTGGAAATGTACCTCCAAAGGCCAACCTCGGGGACTTGAGGGGTTTAGCAAGGGGGCTCGATGGACTTAACAGCTCAGCCATGATTGACGGTGGTGACTTTGATGGTGCCAAAGCTTACAAAGACAGCAAGGTTTGCAATATGCTCACTATGCAGGAATTCCATAGACGATACCACGAAGAGACTGGCATCACATTTGCCTCCCTATACCCTGGCTGCATCGCGACAACAGGGCTATTCAGGGAGCATATCCCCTTGTTTAGGCTCCTTTTCCCTCCATTCCAGAAGTTTATCACCAAAGGATTCGTCTCCGAGGCAGAATCTGGAAAGAGACTTGCACAGGTAATATTTATTAGTGTCAGTTTCACGTATAACCACTGAACTTTATCCACTATAACAGTAACCGTAAAGATAAGATACCTGGCCTAACTCAATCTCAAAAGTTAGCTCGTGAGGAGAGGATTGCTCGAG</gDNA_template>
            <first_frame> G  N  T  N  T  L  A  G  N  V  P  P  K  A  N  L  G  D  L  R  G  L  A  R  G  L  D  G  L  N  S  S  A  M  I  D  G  G  D  F  D  G  A  K  A  Y  K  D  S  K  V  C  N  M  L  T  M  Q  E  F  H  R  R  Y  H  E  E  T  G  I  T  F  A  S  L  Y  P  G  C  I  A  T  T  G  L  F  R  E  H  I  P  L  F  R  L  L  F  P  P  F  Q  K  F  I  T  K  G  F  V  S  E  A  E  S  G  K  R  L  A  Q  V  I  F  I  S  V  S  F  T  Y  N  H  *  T  L  S  T  I  T  V  T  V  K  I  R  Y  L  A  *  L  N  L  K  S  *  L  V  R  R  G  L  L  E </first_frame>
            <second_frame>  E  T  Q  T  H  W  L  E  M  Y  L  Q  R  P  T  S  G  T  *  G  V  *  Q  G  G  S  M  D  L  T  A  Q  P  *  L  T  V  V  T  L  M  V  P  K  L  T  K  T  A  R  F  A  I  C  S  L  C  R  N  S  I  D  D  T  T  K  R  L  A  S  H  L  P  P  Y  T  L  A  A  S  R  Q  Q  G  Y  S  G  S  I  S  P  C  L  G  S  F  S  L  H  S  R  S  L  S  P  K  D  S  S  P  R  Q  N  L  E  R  D  L  H  R  *  Y  L  L  V  S  V  S  R  I  T  T  E  L  Y  P  L  *  Q  *  P  *  R  *  D  T  W  P  N  S  I  S  K  V  S  S  *  G  E  D  C  S   </second_frame>
            <third_frame>   K  H  K  H  I  G  W  K  C  T  S  K  G  Q  P  R  G  L  E  G  F  S  K  G  A  R  W  T  *  Q  L  S  H  D  *  R  W  *  L  *  W  C  Q  S  L  Q  R  Q  Q  G  L  Q  Y  A  H  Y  A  G  I  P  *  T  I  P  R  R  D  W  H  H  I  C  L  P  I  P  W  L  H  R  D  N  R  A  I  Q  G  A  Y  P  L  V  *  A  P  F  P  S  I  P  E  V  Y  H  Q  R  I  R  L  R  G  R  I  W  K  E  T  C  T  G  N  I  Y  *  C  Q  F  H  V  *  P  L  N  F  I  H  Y  N  S  N  R  K  D  K  I  P  G  L  T  Q  S  Q  K  L  A  R  E  E  R  I  A  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12921" stop="13319"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>396</number_coding_nucleotides>
                  <number_encoded_amino_acids>132</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GNTNTLAGNVPPKANLGDLRGLARGLDGLNSSAMIDGGDFDGAKAYKDSKVCNMLTMQEFHRRYHEETGITFASLYPGCIATTGLFREHIPLFRLLFPPFQKFITKGFVSEAESGKRLAQVIFISVSFTYNH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="14124" PGL_stop="13216"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14124" e_stop="14124"/>
            <exon e_start="14064" e_stop="13619"/>
            <exon e_start="13278" e_stop="13216"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.359" acc_prob="0.841" e_score="1.000"/>
          <exon-intron don_prob="0.904" acc_prob="0.000" e_score="0.989"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14124" e_stop="14124" e_length="1"/>
          </exon>
          <intron i_serial="1" don_prob="0.359" acc_prob="0.841">
            <gDNA_intron_boundary i_start="14123" i_stop="14065" i_length="59"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="14064" e_stop="13619" e_length="446"/>
          </exon>
          <intron i_serial="2" don_prob="0.904" acc_prob="0.000">
            <gDNA_intron_boundary i_start="13618" i_stop="13279" i_length="340"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13278" e_stop="13216" e_length="63"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14124" stop="14124"/>
              <exon start="14064" stop="13619"/>
              <exon start="13278" stop="13216"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E316046" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>T : TGAATACGGAATCATAATTCACATGATCATTCATACTGGAAATTGTTGAGTGAGTCATTGATCGAACATGACGCTTGTTGGGTGGACTTAAAGTTGTGAGCGCTATAATTGTTGGCGTGTTGGTAAGCGCTCGATTCTAAAAGGATGAATGATATTTATTCCTAACTCAAAAATTTTACGAAGTGACAACTTTTTAACTACAACAAAACAGACTCGATTCAAATTCTCCTTCATCAACTCCTTTTTCGTGTTCGTCTTGGTGATGGTTGAACTCAATCAGCAAAAAATCTAAGCCAATCCCACGAGTTTCTCACTGACTTCCCACACTTTACGCGCTTTCTCAACGTCACTAGCTTCTTCTGACAACTGGTTCTCAAAGGAGGAAGAGTTCTTGTTCCAGCTCCAGTACACACCTGATTTTGTAAGACTTGGATCACTAACAACCT : GTGCAAGTCTCTTTCCAGATTCTGCCTCGGAGACGAATCCTTTGGTGATAAACTTCTGGAATG</gDNA_template>
            <first_frame>  : L  N  T  E  S  *  F  T  *  S  F  I  L  E  I  V  E  *  V  I  D  R  T  *  R  L  L  G  G  L  K  V  V  S  A  I  I  V  G  V  L  V  S  A  R  F  *  K  D  E  *  Y  L  F  L  T  Q  K  F  Y  E  V  T  T  F  *  L  Q  Q  N  R  L  D  S  N  S  P  S  S  T  P  F  S  C  S  S  W  *  W  L  N  S  I  S  K  K  S  K  P  I  P  R  V  S  H  *  L  P  T  L  Y  A  L  S  Q  R  H  *  L  L  L  T  T  G  S  Q  R  R  K  S  S  C  S  S  S  S  T  H  L  I  L  *  D  L  D  H  *  Q  P  :  V  Q  V  S  F  Q  I  L  P  R  R  R  I  L  W  *  *  T  S  G  M </first_frame>
            <second_frame>  :  *  I  R  N  H  N  S  H  D  H  S  Y  W  K  L  L  S  E  S  L  I  E  H  D  A  C  W  V  D  L  K  L  *  A  L  *  L  L  A  C  W  *  A  L  D  S  K  R  M  N  D  I  Y  S  *  L  K  N  F  T  K  *  Q  L  F  N  Y  N  K  T  D  S  I  Q  I  L  L  H  Q  L  L  F  R  V  R  L  G  D  G  *  T  Q  S  A  K  N  L  S  Q  S  H  E  F  L  T  D  F  P  H  F  T  R  F  L  N  V  T  S  F  F  *  Q  L  V  L  K  G  G  R  V  L  V  P  A  P  V  H  T  *  F  C  K  T  W  I  T  N  N  L :   C  K  S  L  S  R  F  C  L  G  D  E  S  F  G  D  K  L  L  E   </second_frame>
            <third_frame>  :   E  Y  G  I  I  I  H  M  I  I  H  T  G  N  C  *  V  S  H  *  S  N  M  T  L  V  G  W  T  *  S  C  E  R  Y  N  C  W  R  V  G  K  R  S  I  L  K  G  *  M  I  F  I  P  N  S  K  I  L  R  S  D  N  F  L  T  T  T  K  Q  T  R  F  K  F  S  F  I  N  S  F  F  V  F  V  L  V  M  V  E  L  N  Q  Q  K  I  *  A  N  P  T  S  F  S  L  T  S  H  T  L  R  A  F  S  T  S  L  A  S  S  D  N  W  F  S  K  E  E  E  F  L  F  Q  L  Q  Y  T  P  D  F  V  R  L  G  S  L  T  T   : C  A  S  L  F  P  D  S  A  S  E  T  N  P  L  V  I  N  F  W  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13772" stop="13619"/>
                    <exon start="13278" stop="13217"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ANPTSFSLTSHTLRAFSTSLASSDNWFSKEEEFLFQLQYTPDFVRLGSLTTCASLFPDSASETNPLVINFWN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="16566" PGL_stop="14271"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16566" e_stop="16319"/>
            <exon e_start="15573" e_stop="15330"/>
            <exon e_start="14933" e_stop="14813"/>
            <exon e_start="14638" e_stop="14271"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.367" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.940" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16566" e_stop="16319" e_length="248"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.367">
            <gDNA_intron_boundary i_start="16318" i_stop="15574" i_length="745"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="15573" e_stop="15330" e_length="244"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.994">
            <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14933" e_stop="14813" e_length="121"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.940">
            <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="14638" e_stop="14271" e_length="368"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16566" stop="16319"/>
              <exon start="15573" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14518"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16566" stop="16319"/>
              <exon start="15573" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14625"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E393984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16565" stop="16319"/>
              <exon start="15573" stop="15336"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202345" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16563" stop="16319"/>
              <exon start="15573" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699226" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16562" stop="16319"/>
              <exon start="15573" stop="15330"/>
              <exon start="14933" stop="14872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16561" stop="16319"/>
              <exon start="15573" stop="15330"/>
              <exon start="14933" stop="14820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274236" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16561" stop="16319"/>
              <exon start="15573" stop="15361"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E314485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16558" stop="16319"/>
              <exon start="15573" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251191" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16558" stop="16319"/>
              <exon start="15573" stop="15330"/>
              <exon start="14933" stop="14864"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273363" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16556" stop="16319"/>
              <exon start="15573" stop="15330"/>
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          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTCATCTTGAAGCTAAAAAAAACAAAAAAAAAAACAAACGATGTTGGCTATATTTCACAAGGCATTTGCTCATCCTCCTGAAGAATTAAATAGTCCTGCATCAAAAAAATGTTTACTTCCACAACAAACGCTACAAAAATTCGTATCGACTCGTCCATTTGACACCTCTTATGTTACTTTTGGAGATGTTGCTGCTCTTGCTTTTGTTCGTCCTAATTGCACCTCCTTGCTCAATCACAAACAAAG : GTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG : GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG : GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGACATATTCGAGC</gDNA_template>
            <first_frame> I  S  S  *  S  *  K  K  Q  K  K  K  Q  T  M  L  A  I  F  H  K  A  F  A  H  P  P  E  E  L  N  S  P  A  S  K  K  C  L  L  P  Q  Q  T  L  Q  K  F  V  S  T  R  P  F  D  T  S  Y  V  T  F  G  D  V  A  A  L  A  F  V  R  P  N  C  T  S  L  L  N  H  K  Q  R :   Y  F  C  G  Y  D  D  I  Y  C  L  F  M  G  S  L  N  N  L  C  A  Q  I  K  Q  Y  G  L  S  P  K  G  T  N  E  A  M  L  V  I  E  A  Y  R  T  L  R  D  R  G  P  Y  P  A  D  Q  V  I  K  D  F  E  G  S  F  A  F  V  I  Y  D  S  K  T  G  T  V  F  V  A  L  :  G  S  D  G  G  V  K  L  F  W  G  I  A  A  D  G  S  V  V  I  S  D  D  V  E  V  I  K  A  G  C  A  K  S  F  A  P  F  P  T   : G  C  M  F  H  S  E  K  G  L  M  N  F  E  H  P  M  N  K  M  R  A  M  P  R  V  D  S  E  G  V  M  C  G  A  N  F  K  V  D  M  Y  S  R  V  N  S  I  P  R  V  G  S  E  A  N  W  S  D  W  N  T  S  Y  *  V  D  S  L  Q  F  S  N  F  L  *  C  L  F  C  F  G  *  I  F  E  F  V  L  G  L  V  S  F  L  Y  V  L  C  T  C  V  *  R  L  K  N  K  *  N  I  R  N  D  S  A  Y  S  M  T  Y  S  S </first_frame>
            <second_frame>  F  H  L  E  A  K  K  N  K  K  K  N  K  R  C  W  L  Y  F  T  R  H  L  L  I  L  L  K  N  *  I  V  L  H  Q  K  N  V  Y  F  H  N  K  R  Y  K  N  S  Y  R  L  V  H  L  T  P  L  M  L  L  L  E  M  L  L  L  L  L  L  F  V  L  I  A  P  P  C  S  I  T  N  K   : G  I  F  V  V  M  M  I  F  T  V  C  S  W  G  V  *  T  I  C  V  H  K  S  N  N  M  G  Y  H  Q  K  V  Q  M  K  P  C  *  S  L  K  P  T  G  H  L  E  T  G  D  L  I  Q  L  I  K  L  L  R  I  L  K  E  V  L  L  L  L  S  M  I  V  K  L  E  L  Y  L  L  L  W :   V  Q  M  V  G  *  S  Y  F  G  V  L  L  L  M  D  L  W  *  F  L  M  M  *  R  L  L  K  L  D  V  L  S  H  L  H  P  F  P  Q  :  V  V  C  S  I  V  R  K  D  *  *  I  S  S  T  R  *  T  R  *  G  L  C  Q  E  *  I  V  K  G  *  C  V  E  P  T  S  K  W  I  C  I  Q  E  L  I  A  S  L  E  L  A  V  K  L  T  G  L  T  G  T  L  L  T  K  S  I  L  C  N  F  Q  T  S  F  S  V  C  S  V  L  V  R  F  S  S  L  F  *  V  W  F  L  S  C  T  C  F  A  P  V  Y  N  A  *  K  I  N  E  T  L  E  M  I  Q  L  I  R  *  H  I  R   </second_frame>
            <third_frame>   F  I  L  K  L  K  K  T  K  K  K  T  N  D  V  G  Y  I  S  Q  G  I  C  S  S  S  *  R  I  K  *  S  C  I  K  K  M  F  T  S  T  T  N  A  T  K  I  R  I  D  S  S  I  *  H  L  L  C  Y  F  W  R  C  C  C  S  C  F  C  S  S  *  L  H  L  L  A  Q  S  Q  T  K  :  V  F  L  W  L  *  *  Y  L  L  F  V  H  G  E  F  E  Q  F  V  C  T  N  Q  T  I  W  A  I  T  K  R  Y  K  *  S  H  A  S  H  *  S  L  Q  D  T  *  R  Q  G  T  L  S  S  *  S  S  Y  *  G  F  *  R  K  F  C  F  C  Y  L  *  *  *  N  W  N  C  I  C  C  F   : G  F  R  W  W  G  E  V  I  L  G  Y  C  C  *  W  I  C  G  D  F  *  *  C  R  G  Y  *  S  W  M  C  *  V  I  C  T  L  S  H  R :   L  Y  V  P  *  *  E  R  T  N  E  F  R  A  P  D  E  Q  D  E  G  Y  A  K  S  R  *  *  R  G  N  V  W  S  Q  L  Q  S  G  Y  V  F  K  S  *  *  H  P  *  S  W  Q  *  S  *  L  V  *  L  E  H  F  L  L  S  R  F  S  A  I  F  K  L  P  L  V  F  V  L  F  W  L  D  F  R  V  C  F  R  F  G  F  F  P  V  R  A  L  H  L  C  I  T  L  E  K  *  M  K  H  *  K  *  F  S  L  F  D  D  I  F  E  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16548" stop="16319"/>
                    <exon start="15573" stop="15330"/>
                    <exon start="14933" stop="14813"/>
                    <exon start="14638" stop="14445"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>786</number_coding_nucleotides>
                  <number_encoded_amino_acids>262</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKQKKKQTMLAIFHKAFAHPPEELNSPASKKCLLPQQTLQKFVSTRPFDTSYVTFGDVAALAFVRPNCTSLLNHKQRYFCGYDDIYCLFMGSLNNLCAQIKQYGLSPKGTNEAMLVIEAYRTLRDRGPYPADQVIKDFEGSFAFVIYDSKTGTVFVALGSDGGVKLFWGIAADGSVVISDDVEVIKAGCAKSFAPFPTGCMFHSEKGLMNFEHPMNKMRAMPRVDSEGVMCGANFKVDMYSRVNSIPRVGSEANWSDWNTSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="15575" e_stop="15330"/>
            <exon e_start="14933" e_stop="14813"/>
            <exon e_start="14638" e_stop="14277"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.940" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="15575" e_stop="15330" e_length="246"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.994">
            <gDNA_intron_boundary i_start="15329" i_stop="14934" i_length="396"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="14933" e_stop="14813" e_length="121"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.940">
            <gDNA_intron_boundary i_start="14812" i_stop="14639" i_length="174"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14638" e_stop="14277" e_length="362"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15575" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253978" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15570" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14455"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276111" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15556" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261248" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15537" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253728" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15484" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397455" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15463" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256652" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15418" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254415" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15414" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251552" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15414" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14424"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259703" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="15403" stop="15330"/>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276866" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14277"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407900" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14277"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421449" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E421450" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14933" stop="14813"/>
              <exon start="14638" stop="14281"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274725" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14923" stop="14813"/>
              <exon start="14638" stop="14291"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715555" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14555" stop="14300"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397335" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGGTATTTTTGTGGTTATGATGATATTTACTGTTTGTTCATGGGGAGTTTGAACAATTTGTGTGCACAAATCAAACAATATGGGCTATCACCAAAAGGTACAAATGAAGCCATGCTAGTCATTGAAGCCTACAGGACACTTAGAGACAGGGGACCTTATCCAGCTGATCAAGTTATTAAGGATTTTGAAGGAAGTTTTGCTTTTGTTATCTATGATAGTAAAACTGGAACTGTATTTGTTGCTTTG : GGTTCAGATGGTGGGGTGAAGTTATTTTGGGGTATTGCTGCTGATGGATCTGTGGTGATTTCTGATGATGTAGAGGTTATTAAAGCTGGATGTGCTAAGTCATTTGCACCCTTTCCCACAG : GTTGTATGTTCCATAGTGAGAAAGGACTAATGAATTTCGAGCACCCGATGAACAAGATGAGGGCTATGCCAAGAGTAGATAGTGAAGGGGTAATGTGTGGAGCCAACTTCAAAGTGGATATGTATTCAAGAGTTAATAGCATCCCTAGAGTTGGCAGTGAAGCTAACTGGTCTGACTGGAACACTTCTTACTAAGTCGATTCTCTGCAATTTTCAAACTTCCTTTAGTGTTTGTTCTGTTTTGGTTAGATTTTCGAGTTTGTTTTAGGTTTGGTTTCTTTCCTGTACGTGCTTTGCACCTGTGTATAACGCTTGAAAAATAAATGAAACATTAGAAATGATTCAGCTTATTCGATGACATAT</gDNA_template>
            <first_frame> R  Y  F  C  G  Y  D  D  I  Y  C  L  F  M  G  S  L  N  N  L  C  A  Q  I  K  Q  Y  G  L  S  P  K  G  T  N  E  A  M  L  V  I  E  A  Y  R  T  L  R  D  R  G  P  Y  P  A  D  Q  V  I  K  D  F  E  G  S  F  A  F  V  I  Y  D  S  K  T  G  T  V  F  V  A  L  :  G  S  D  G  G  V  K  L  F  W  G  I  A  A  D  G  S  V  V  I  S  D  D  V  E  V  I  K  A  G  C  A  K  S  F  A  P  F  P  T   : G  C  M  F  H  S  E  K  G  L  M  N  F  E  H  P  M  N  K  M  R  A  M  P  R  V  D  S  E  G  V  M  C  G  A  N  F  K  V  D  M  Y  S  R  V  N  S  I  P  R  V  G  S  E  A  N  W  S  D  W  N  T  S  Y  *  V  D  S  L  Q  F  S  N  F  L  *  C  L  F  C  F  G  *  I  F  E  F  V  L  G  L  V  S  F  L  Y  V  L  C  T  C  V  *  R  L  K  N  K  *  N  I  R  N  D  S  A  Y  S  M  T  Y </first_frame>
            <second_frame>  G  I  F  V  V  M  M  I  F  T  V  C  S  W  G  V  *  T  I  C  V  H  K  S  N  N  M  G  Y  H  Q  K  V  Q  M  K  P  C  *  S  L  K  P  T  G  H  L  E  T  G  D  L  I  Q  L  I  K  L  L  R  I  L  K  E  V  L  L  L  L  S  M  I  V  K  L  E  L  Y  L  L  L  W :   V  Q  M  V  G  *  S  Y  F  G  V  L  L  L  M  D  L  W  *  F  L  M  M  *  R  L  L  K  L  D  V  L  S  H  L  H  P  F  P  Q  :  V  V  C  S  I  V  R  K  D  *  *  I  S  S  T  R  *  T  R  *  G  L  C  Q  E  *  I  V  K  G  *  C  V  E  P  T  S  K  W  I  C  I  Q  E  L  I  A  S  L  E  L  A  V  K  L  T  G  L  T  G  T  L  L  T  K  S  I  L  C  N  F  Q  T  S  F  S  V  C  S  V  L  V  R  F  S  S  L  F  *  V  W  F  L  S  C  T  C  F  A  P  V  Y  N  A  *  K  I  N  E  T  L  E  M  I  Q  L  I  R  *  H   </second_frame>
            <third_frame>   V  F  L  W  L  *  *  Y  L  L  F  V  H  G  E  F  E  Q  F  V  C  T  N  Q  T  I  W  A  I  T  K  R  Y  K  *  S  H  A  S  H  *  S  L  Q  D  T  *  R  Q  G  T  L  S  S  *  S  S  Y  *  G  F  *  R  K  F  C  F  C  Y  L  *  *  *  N  W  N  C  I  C  C  F   : G  F  R  W  W  G  E  V  I  L  G  Y  C  C  *  W  I  C  G  D  F  *  *  C  R  G  Y  *  S  W  M  C  *  V  I  C  T  L  S  H  R :   L  Y  V  P  *  *  E  R  T  N  E  F  R  A  P  D  E  Q  D  E  G  Y  A  K  S  R  *  *  R  G  N  V  W  S  Q  L  Q  S  G  Y  V  F  K  S  *  *  H  P  *  S  W  Q  *  S  *  L  V  *  L  E  H  F  L  L  S  R  F  S  A  I  F  K  L  P  L  V  F  V  L  F  W  L  D  F  R  V  C  F  R  F  G  F  F  P  V  R  A  L  H  L  C  I  T  L  E  K  *  M  K  H  *  K  *  F  S  L  F  D  D  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="15575" stop="15330"/>
                    <exon start="14933" stop="14813"/>
                    <exon start="14638" stop="14445"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RYFCGYDDIYCLFMGSLNNLCAQIKQYGLSPKGTNEAMLVIEAYRTLRDRGPYPADQVIKDFEGSFAFVIYDSKTGTVFVALGSDGGVKLFWGIAADGSVVISDDVEVIKAGCAKSFAPFPTGCMFHSEKGLMNFEHPMNKMRAMPRVDSEGVMCGANFKVDMYSRVNSIPRVGSEANWSDWNTSY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="23477" PGL_stop="30065"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23477" e_stop="23592"/>
            <exon e_start="24080" e_stop="24226"/>
            <exon e_start="24365" e_stop="24430"/>
            <exon e_start="24890" e_stop="25055"/>
            <exon e_start="25155" e_stop="25386"/>
            <exon e_start="25714" e_stop="26469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
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          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCTATTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG : ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG : GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG : TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG : GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT : TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTATTTTGCAATAATGAAATTGTGTACTACATCAAAGATATCCAAGAACATCAGTTGTTTAGAAGCAAATATGGTAACATCTGCATTTTATAATTAT</gDNA_template>
            <first_frame> H  L  L  I  K  N  *  I  G  R  N  R  E  I  M  E  T  E  E  N  I  V  I  V  G  A  G  I  A  G  L  A  T  S  L  A  L  H  R :   L  G  L  R  S  I  V  L  E  S  A  D  S  L  R  A  T  G  F  A  L  A  L  W  T  N  A  W  R  A  L  D  A  L  D  I  G  D  S  L  R  Q  R  S  L  S  I  T  G :   F  K  S  F  S  A  E  S  G  A  P  I  T  E  V  S  F  V  G  N  N  S :   V  E  Y  E  S  R  C  V  R  R  K  D  L  L  E  T  L  A  N  E  L  P  Q  G  A  I  R  Y  S  S  K  V  D  S  V  E  V  S  G  P  L  K  L  V  H  L  A  D  G  C  T  I  R  T  K  :  A  L  I  G  C  D  G  V  N  S  V  V  A  N  W  L  G  L  Q  K  P  V  Y  S  G  R  S  A  I  R  G  F  V  E  Y  P  E  K  H  G  Y  Q  P  K  F  H  A  Y  F  G  G  G  V  R  F  G  F  L  P  S  D  E  K  S  L  Y  W  F  C  T  F  T  P  S  V  V  H   : F  D  G  N  A  E  Q  D  P  I  K  L  K  Q  F  V  L  N  K  A  S  N  V  S  K  E  L  S  T  V  I  D  R  T  T  L  D  S  I  S  I  A  Q  L  K  L  R  V  P  W  N  V  L  F  G  N  I  L  K  N  N  V  C  V  V  G  D  A  L  H  P  M  T  P  D  L  G  Q  G  G  C  S  A  L  E  D  S  V  V  I  A  K  C  L  A  E  A  L  I  K  P  I  T  E  Q  E  D  D  E  S  M  R  I  R  K  G  L  E  K  Y  A  K  E  R  R  W  R  S  F  T  F  I  S  A  A  Y  L  S  G  F  I  Q  E  T  D  N  K  I  I  S  F  L  R  Q  H  F  L  G  G  V  T  I  S  V  T  L  K  I  A  N  F  D  C  G  K  L  A  V  S  *  *  L  Q  L  D  P  L  E  A  M  N  I  F  Y  G  L  C  L  I  S  I  *  H  T  C  S  G  L  V  V  S  K  E  L  *  D  R  V  G  S  L  F  C  N  N  E  I  V  Y  Y  I  K  D  I  Q  E  H  Q  L  F  R  S  K  Y  G  N  I  C  I  L  *  L  </first_frame>
            <second_frame>  I  Y  *  L  K  I  K  L  G  E  T  E  K  *  W  R  L  K  K  I  L  *  L  L  V  L  V  *  L  V  L  L  L  L  W  P  F  T   : D  W  G  C  G  V  L  C  W  N  Q  L  I  R  C  E  L  L  D  L  H  W  R  C  G  L  M  P  G  E  L  W  M  H  W  T  L  G  T  L  L  D  N  V  L  Y  P  L  L   : G  L  K  V  S  Q  R  N  Q  V  H  L  S  R  R  Y  H  L  W  G  I  T   : V  W  S  M  K  V  V  V  *  E  E  K  I  C  W  R  H  *  L  M  N  C  L  K  A  L  L  D  I  L  L  R  *  I  P  L  K  Y  L  D  H  *  N  W  Y  I  L  Q  M  V  A  L  L  E  P  R :   P  *  L  G  V  T  E  S  I  L  W  W  Q  T  G  L  G  F  R  N  L  S  I  L  G  A  L  Q  L  E  A  L  L  S  I  P  K  N  M  V  I  S  L  S  S  T  H  I  L  E  V  E  F  G  L  D  F  F  L  V  M  R  R  V  Y  T  G  F  A  H  S  H  H  L  L  F  I  :  L  M  E  M  Q  N  K  I  Q  L  N  *  S  N  S  C  *  T  R  P  V  M  C  L  K  N  S  P  P  L  *  T  E  Q  L  S  T  L  Y  L  L  L  S  *  N  *  E  Y  H  G  M  F  C  L  G  I  F  *  K  I  T  S  V  W  *  V  M  H  F  I  P  *  L  L  I  L  V  K  V  D  V  L  L  *  R  T  V  L  L  S  Q  S  A  L  Q  K  P  *  *  N  R  *  Q  N  K  K  T  M  N  L  *  G  L  E  K  D  S  R  N  M  L  K  R  G  D  G  E  V  L  H  L  S  V  L  L  I  Y  L  V  S  Y  K  R  L  I  T  R  *  S  V  S  *  D  N  I  F  *  V  E  L  L  Y  Q  L  H  *  K  L  L  T  S  T  A  E  N  *  L  F  L  S  S  S  N  W  I  L  *  R  L  *  I  S  F  M  D  F  V  *  Y  L  S  S  I  H  V  P  V  *  L  C  L  K  N  C  K  T  E  S  D  P  Y  F  A  I  M  K  L  C  T  T  S  K  I  S  K  N  I  S  C  L  E  A  N  M  V  T  S  A  F  Y  N  Y </second_frame>
            <third_frame>   S  I  N  *  K  L  N  W  E  K  Q  R  N  N  G  D  *  R  K  Y  C  N  C  W  C  W  Y  S  W  S  C  Y  F  F  G  P  S  Q  :  I  G  A  A  E  Y  C  V  G  I  S  *  F  V  A  S  Y  W  I  C  I  G  V  V  D  *  C  L  E  S  F  G  C  I  G  H  W  G  L  S  *  T  T  F  F  I  H  Y  W  :  V  *  K  F  L  S  G  I  R  C  T  Y  H  G  G  I  I  C  G  E  *  Q  :  C  G  V  *  K  S  L  C  E  K  K  R  S  V  G  D  I  S  *  *  T  A  S  R  R  Y  *  I  F  F  *  G  R  F  R  *  S  I  W  T  I  E  I  G  T  S  C  R  W  L  H  Y  *  N  Q   : G  L  N  W  V  *  R  S  Q  F  C  G  G  K  L  A  W  A  S  E  T  C  L  F  W  A  L  C  N  *  R  L  C  *  V  S  R  K  T  W  L  S  A  *  V  P  R  I  F  W  R  W  S  S  V  W  I  S  S  *  *  *  E  E  F  I  L  V  L  H  I  H  T  I  C  C  S  F :   *  W  K  C  R  T  R  S  N  *  I  E  A  I  R  V  E  Q  G  Q  *  C  V  *  R  T  L  H  R  Y  R  Q  N  N  S  R  L  Y  I  Y  C  S  A  E  I  E  S  T  M  E  C  S  V  W  E  Y  F  E  K  *  R  L  C  G  R  *  C  T  S  S  H  D  S  *  S  W  S  R  W  M  F  C  F  R  G  Q  C  C  Y  R  K  V  P  C  R  S  L  D  K  T  D  N  R  T  R  R  R  *  I  Y  E  D  *  K  R  T  R  E  I  C  *  R  E  E  M  E  K  F  Y  I  Y  Q  C  C  L  F  I  W  F  H  T  R  D  *  *  Q  D  N  Q  F  L  K  T  T  F  F  R  W  S  Y  Y  I  S  Y  T  K  N  C  *  L  R  L  R  K  T  S  C  F  L  V  A  P  I  G  S  F  R  G  Y  E  Y  L  L  W  T  L  F  N  I  Y  L  A  Y  M  F  R  F  S  C  V  *  R  I  V  R  P  S  R  I  L  I  L  Q  *  *  N  C  V  L  H  Q  R  Y  P  R  T  S  V  V  *  K  Q  I  W  *  H  L  H  F  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23498" stop="23592"/>
                    <exon start="24080" stop="24226"/>
                    <exon start="24365" stop="24430"/>
                    <exon start="24890" stop="25055"/>
                    <exon start="25155" stop="25386"/>
                    <exon start="25714" stop="26252"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1242</number_coding_nucleotides>
                  <number_encoded_amino_acids>414</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGRNREIMETEENIVIVGAGIAGLATSLALHRLGLRSIVLESADSLRATGFALALWTNAWRALDALDIGDSLRQRSLSITGFKSFSAESGAPITEVSFVGNNSVEYESRCVRRKDLLETLANELPQGAIRYSSKVDSVEVSGPLKLVHLADGCTIRTKALIGCDGVNSVVANWLGLQKPVYSGRSAIRGFVEYPEKHGYQPKFHAYFGGGVRFGFLPSDEKSLYWFCTFTPSVVHFDGNAEQDPIKLKQFVLNKASNVSKELSTVIDRTTLDSISIAQLKLRVPWNVLFGNILKNNVCVVGDALHPMTPDLGQGGCSALEDSVVIAKCLAEALIKPITEQEDDESMRIRKGLEKYAKERRWRSFTFISAAYLSGFIQETDNKIISFLRQHFLGGVTISVTLKIANFDCGKLAVS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="23477" e_stop="23592"/>
            <exon e_start="24080" e_stop="24226"/>
            <exon e_start="24365" e_stop="24430"/>
            <exon e_start="24890" e_stop="25055"/>
            <exon e_start="25155" e_stop="25386"/>
            <exon e_start="25714" e_stop="26385"/>
            <exon e_start="29132" e_stop="29145"/>
            <exon e_start="29328" e_stop="29369"/>
            <exon e_start="30027" e_stop="30065"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.358" e_score="0.939"/>
          <exon-intron don_prob="0.960" acc_prob="0.564" e_score="0.714"/>
          <exon-intron don_prob="0.968" acc_prob="0.000" e_score="0.548"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23477" e_stop="23592" e_length="116"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.914">
            <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24080" e_stop="24226" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.979">
            <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24365" e_stop="24430" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.972">
            <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24890" e_stop="25055" e_length="166"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="25155" e_stop="25386" e_length="232"/>
          </exon>
          <intron i_serial="5" don_prob="0.822" acc_prob="0.997">
            <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327"/>
          </intron>
          <exon e_serial="6" e_score="0.939">
            <gDNA_exon_boundary e_start="25714" e_stop="26385" e_length="672"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.358">
            <gDNA_intron_boundary i_start="26386" i_stop="29131" i_length="2746"/>
          </intron>
          <exon e_serial="7" e_score="0.714">
            <gDNA_exon_boundary e_start="29132" e_stop="29145" e_length="14"/>
          </exon>
          <intron i_serial="7" don_prob="0.960" acc_prob="0.564">
            <gDNA_intron_boundary i_start="29146" i_stop="29327" i_length="182"/>
          </intron>
          <exon e_serial="8" e_score="0.548">
            <gDNA_exon_boundary e_start="29328" e_stop="29369" e_length="42"/>
          </exon>
          <intron i_serial="8" don_prob="0.968" acc_prob="0.000">
            <gDNA_intron_boundary i_start="29370" i_stop="30026" i_length="657"/>
          </intron>
          <exon e_serial="9" e_score="0.667">
            <gDNA_exon_boundary e_start="30027" e_stop="30065" e_length="39"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23477" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720199" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23483" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274303" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23488" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23489" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25837"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E720583" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23489" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255043" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23490" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23490" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23505" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23505" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23506" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23506" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23507" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23507" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23509" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702289" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23510" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23515" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23515" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203827" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23516" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401027" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23517" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23517" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25282"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23520" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23535" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23535" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23535" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23564" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24096" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24096" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24102" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581479" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24102" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24116" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25747"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24139" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="26029"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E706593" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24159" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="26385"/>
              <exon start="29132" stop="29145"/>
              <exon start="29328" stop="29369"/>
              <exon start="30027" stop="30065"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24165" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24218" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25850"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259560" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24893" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E210178" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24910" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="25759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256793" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24919" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="26264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E708164" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24931" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="26075"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E697617" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24946" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="26266"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699353" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24960" stop="25055"/>
              <exon start="25155" stop="25386"/>
              <exon start="25714" stop="26147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710476" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25209" stop="25386"/>
              <exon start="25714" stop="26345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25235" stop="25386"/>
              <exon start="25714" stop="26239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257290" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25295" stop="25386"/>
              <exon start="25714" stop="26224"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25312" stop="25386"/>
              <exon start="25714" stop="26333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25320" stop="25386"/>
              <exon start="25714" stop="26144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256324" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25335" stop="25386"/>
              <exon start="25714" stop="25940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25836" stop="26335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25836" stop="26304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25837" stop="26355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25913" stop="26325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286818" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATCTATTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG : ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG : GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG : TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG : GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT : TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTATTTTGCAATA : GAGAAAATGAAAAG : ATGTTATCATACCATTTTTCGATCAGCCCTAAATTTTAACAA : GAAAATCAATTTTGAAAAGAAAGAGAAAAATAAAAAGGA</gDNA_template>
            <first_frame> H  L  L  I  K  N  *  I  G  R  N  R  E  I  M  E  T  E  E  N  I  V  I  V  G  A  G  I  A  G  L  A  T  S  L  A  L  H  R :   L  G  L  R  S  I  V  L  E  S  A  D  S  L  R  A  T  G  F  A  L  A  L  W  T  N  A  W  R  A  L  D  A  L  D  I  G  D  S  L  R  Q  R  S  L  S  I  T  G :   F  K  S  F  S  A  E  S  G  A  P  I  T  E  V  S  F  V  G  N  N  S :   V  E  Y  E  S  R  C  V  R  R  K  D  L  L  E  T  L  A  N  E  L  P  Q  G  A  I  R  Y  S  S  K  V  D  S  V  E  V  S  G  P  L  K  L  V  H  L  A  D  G  C  T  I  R  T  K  :  A  L  I  G  C  D  G  V  N  S  V  V  A  N  W  L  G  L  Q  K  P  V  Y  S  G  R  S  A  I  R  G  F  V  E  Y  P  E  K  H  G  Y  Q  P  K  F  H  A  Y  F  G  G  G  V  R  F  G  F  L  P  S  D  E  K  S  L  Y  W  F  C  T  F  T  P  S  V  V  H   : F  D  G  N  A  E  Q  D  P  I  K  L  K  Q  F  V  L  N  K  A  S  N  V  S  K  E  L  S  T  V  I  D  R  T  T  L  D  S  I  S  I  A  Q  L  K  L  R  V  P  W  N  V  L  F  G  N  I  L  K  N  N  V  C  V  V  G  D  A  L  H  P  M  T  P  D  L  G  Q  G  G  C  S  A  L  E  D  S  V  V  I  A  K  C  L  A  E  A  L  I  K  P  I  T  E  Q  E  D  D  E  S  M  R  I  R  K  G  L  E  K  Y  A  K  E  R  R  W  R  S  F  T  F  I  S  A  A  Y  L  S  G  F  I  Q  E  T  D  N  K  I  I  S  F  L  R  Q  H  F  L  G  G  V  T  I  S  V  T  L  K  I  A  N  F  D  C  G  K  L  A  V  S  *  *  L  Q  L  D  P  L  E  A  M  N  I  F  Y  G  L  C  L  I  S  I  *  H  T  C  S  G  L  V  V  S  K  E  L  *  D  R  V  G  S  L  F  C  N   : R  E  N  E  K  :  M  L  S  Y  H  F  S  I  S  P  K  F  *  Q  :  E  N  Q  F  *  K  E  R  E  K  *  K  G </first_frame>
            <second_frame>  I  Y  *  L  K  I  K  L  G  E  T  E  K  *  W  R  L  K  K  I  L  *  L  L  V  L  V  *  L  V  L  L  L  L  W  P  F  T   : D  W  G  C  G  V  L  C  W  N  Q  L  I  R  C  E  L  L  D  L  H  W  R  C  G  L  M  P  G  E  L  W  M  H  W  T  L  G  T  L  L  D  N  V  L  Y  P  L  L   : G  L  K  V  S  Q  R  N  Q  V  H  L  S  R  R  Y  H  L  W  G  I  T   : V  W  S  M  K  V  V  V  *  E  E  K  I  C  W  R  H  *  L  M  N  C  L  K  A  L  L  D  I  L  L  R  *  I  P  L  K  Y  L  D  H  *  N  W  Y  I  L  Q  M  V  A  L  L  E  P  R :   P  *  L  G  V  T  E  S  I  L  W  W  Q  T  G  L  G  F  R  N  L  S  I  L  G  A  L  Q  L  E  A  L  L  S  I  P  K  N  M  V  I  S  L  S  S  T  H  I  L  E  V  E  F  G  L  D  F  F  L  V  M  R  R  V  Y  T  G  F  A  H  S  H  H  L  L  F  I  :  L  M  E  M  Q  N  K  I  Q  L  N  *  S  N  S  C  *  T  R  P  V  M  C  L  K  N  S  P  P  L  *  T  E  Q  L  S  T  L  Y  L  L  L  S  *  N  *  E  Y  H  G  M  F  C  L  G  I  F  *  K  I  T  S  V  W  *  V  M  H  F  I  P  *  L  L  I  L  V  K  V  D  V  L  L  *  R  T  V  L  L  S  Q  S  A  L  Q  K  P  *  *  N  R  *  Q  N  K  K  T  M  N  L  *  G  L  E  K  D  S  R  N  M  L  K  R  G  D  G  E  V  L  H  L  S  V  L  L  I  Y  L  V  S  Y  K  R  L  I  T  R  *  S  V  S  *  D  N  I  F  *  V  E  L  L  Y  Q  L  H  *  K  L  L  T  S  T  A  E  N  *  L  F  L  S  S  S  N  W  I  L  *  R  L  *  I  S  F  M  D  F  V  *  Y  L  S  S  I  H  V  P  V  *  L  C  L  K  N  C  K  T  E  S  D  P  Y  F  A  I  :  E  K  M  K  R :   C  Y  H  T  I  F  R  S  A  L  N  F  N  K :   K  I  N  F  E  K  K  E  K  N  K  K   </second_frame>
            <third_frame>   S  I  N  *  K  L  N  W  E  K  Q  R  N  N  G  D  *  R  K  Y  C  N  C  W  C  W  Y  S  W  S  C  Y  F  F  G  P  S  Q  :  I  G  A  A  E  Y  C  V  G  I  S  *  F  V  A  S  Y  W  I  C  I  G  V  V  D  *  C  L  E  S  F  G  C  I  G  H  W  G  L  S  *  T  T  F  F  I  H  Y  W  :  V  *  K  F  L  S  G  I  R  C  T  Y  H  G  G  I  I  C  G  E  *  Q  :  C  G  V  *  K  S  L  C  E  K  K  R  S  V  G  D  I  S  *  *  T  A  S  R  R  Y  *  I  F  F  *  G  R  F  R  *  S  I  W  T  I  E  I  G  T  S  C  R  W  L  H  Y  *  N  Q   : G  L  N  W  V  *  R  S  Q  F  C  G  G  K  L  A  W  A  S  E  T  C  L  F  W  A  L  C  N  *  R  L  C  *  V  S  R  K  T  W  L  S  A  *  V  P  R  I  F  W  R  W  S  S  V  W  I  S  S  *  *  *  E  E  F  I  L  V  L  H  I  H  T  I  C  C  S  F :   *  W  K  C  R  T  R  S  N  *  I  E  A  I  R  V  E  Q  G  Q  *  C  V  *  R  T  L  H  R  Y  R  Q  N  N  S  R  L  Y  I  Y  C  S  A  E  I  E  S  T  M  E  C  S  V  W  E  Y  F  E  K  *  R  L  C  G  R  *  C  T  S  S  H  D  S  *  S  W  S  R  W  M  F  C  F  R  G  Q  C  C  Y  R  K  V  P  C  R  S  L  D  K  T  D  N  R  T  R  R  R  *  I  Y  E  D  *  K  R  T  R  E  I  C  *  R  E  E  M  E  K  F  Y  I  Y  Q  C  C  L  F  I  W  F  H  T  R  D  *  *  Q  D  N  Q  F  L  K  T  T  F  F  R  W  S  Y  Y  I  S  Y  T  K  N  C  *  L  R  L  R  K  T  S  C  F  L  V  A  P  I  G  S  F  R  G  Y  E  Y  L  L  W  T  L  F  N  I  Y  L  A  Y  M  F  R  F  S  C  V  *  R  I  V  R  P  S  R  I  L  I  L  Q  * :   R  K  *  K   : D  V  I  I  P  F  F  D  Q  P  *  I  L  T   : R  K  S  I  L  K  R  K  R  K  I  K  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23498" stop="23592"/>
                    <exon start="24080" stop="24226"/>
                    <exon start="24365" stop="24430"/>
                    <exon start="24890" stop="25055"/>
                    <exon start="25155" stop="25386"/>
                    <exon start="25714" stop="26252"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1242</number_coding_nucleotides>
                  <number_encoded_amino_acids>414</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGRNREIMETEENIVIVGAGIAGLATSLALHRLGLRSIVLESADSLRATGFALALWTNAWRALDALDIGDSLRQRSLSITGFKSFSAESGAPITEVSFVGNNSVEYESRCVRRKDLLETLANELPQGAIRYSSKVDSVEVSGPLKLVHLADGCTIRTKALIGCDGVNSVVANWLGLQKPVYSGRSAIRGFVEYPEKHGYQPKFHAYFGGGVRFGFLPSDEKSLYWFCTFTPSVVHFDGNAEQDPIKLKQFVLNKASNVSKELSTVIDRTTLDSISIAQLKLRVPWNVLFGNILKNNVCVVGDALHPMTPDLGQGGCSALEDSVVIAKCLAEALIKPITEQEDDESMRIRKGLEKYAKERRWRSFTFISAAYLSGFIQETDNKIISFLRQHFLGGVTISVTLKIANFDCGKLAVS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="23483" e_stop="23592"/>
            <exon e_start="24080" e_stop="24226"/>
            <exon e_start="24365" e_stop="24430"/>
            <exon e_start="24890" e_stop="25055"/>
            <exon e_start="25155" e_stop="26355"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.930"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23483" e_stop="23592" e_length="110"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.914">
            <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24080" e_stop="24226" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.979">
            <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24365" e_stop="24430" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.972">
            <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24890" e_stop="25055" e_length="166"/>
          </exon>
          <intron i_serial="4" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="25056" i_stop="25154" i_length="99"/>
          </intron>
          <exon e_serial="5" e_score="0.930">
            <gDNA_exon_boundary e_start="25155" e_stop="26355" e_length="1201"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23483" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274303" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23488" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23489" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25237"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255043" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23490" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25301"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261466" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23490" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25217"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E272157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23505" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25256"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416943" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23505" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23506" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264746" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23506" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23507" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E204220" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23507" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23510" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23515" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23515" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203827" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23517" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25286"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23517" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25282"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E264003" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23520" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23535" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25315"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369985" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23535" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369910" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23535" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25242"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259731" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23564" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25303"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E259960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24096" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25386"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276686" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24096" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274792" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24102" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E581341" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24165" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
              <exon start="25155" stop="25174"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E443785" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24218" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25157" stop="25872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463086" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25197" stop="25766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25429" stop="26089"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375512" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25429" stop="25997"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369854" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25429" stop="25989"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255349" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25836" stop="26335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25836" stop="26304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25837" stop="26355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25913" stop="26325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286818" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG : ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG : GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG : TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAG : GCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATTGTAAGCCACCTCTTACATACCGTTTCTTTTGAAGATTTACTTTTTGAAGGATATTGGTGTTGGCTAGAGAGCTTAACTCTCTGAAGTGGGAGCCTTGACGTAATTGGTAAAGTTACTGTCATGTGACCTAGAGGTTACGGATCCGAGCTGTAGAAACAGCCTCTTGCAGAAATGCAGGTTAAGATTGCATACATTAGTTCCCTGTGGTCCAGGCCTTCCCCCGAACCCTGTGCATAGCAGGCGCTTAGTGCACCGAGCTGTCTAGATATCTTACATCTCATAAACTAGTCATGTTTAGTTGTTCATTTTAATTGGGATTTTATGCAGTTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGT</gDNA_template>
            <first_frame> L  I  K  N  *  I  G  R  N  R  E  I  M  E  T  E  E  N  I  V  I  V  G  A  G  I  A  G  L  A  T  S  L  A  L  H  R :   L  G  L  R  S  I  V  L  E  S  A  D  S  L  R  A  T  G  F  A  L  A  L  W  T  N  A  W  R  A  L  D  A  L  D  I  G  D  S  L  R  Q  R  S  L  S  I  T  G :   F  K  S  F  S  A  E  S  G  A  P  I  T  E  V  S  F  V  G  N  N  S :   V  E  Y  E  S  R  C  V  R  R  K  D  L  L  E  T  L  A  N  E  L  P  Q  G  A  I  R  Y  S  S  K  V  D  S  V  E  V  S  G  P  L  K  L  V  H  L  A  D  G  C  T  I  R  T  K  :  A  L  I  G  C  D  G  V  N  S  V  V  A  N  W  L  G  L  Q  K  P  V  Y  S  G  R  S  A  I  R  G  F  V  E  Y  P  E  K  H  G  Y  Q  P  K  F  H  A  Y  F  G  G  G  V  R  F  G  F  L  P  S  D  E  K  S  L  Y  W  F  C  T  F  T  P  S  V  V  H  C  K  P  P  L  T  Y  R  F  F  *  R  F  T  F  *  R  I  L  V  L  A  R  E  L  N  S  L  K  W  E  P  *  R  N  W  *  S  Y  C  H  V  T  *  R  L  R  I  R  A  V  E  T  A  S  C  R  N  A  G  *  D  C  I  H  *  F  P  V  V  Q  A  F  P  R  T  L  C  I  A  G  A  *  C  T  E  L  S  R  Y  L  T  S  H  K  L  V  M  F  S  C  S  F  *  L  G  F  Y  A  V  D  G  N  A  E  Q  D  P  I  K  L  K  Q  F  V  L  N  K  A  S  N  V  S  K  E  L  S  T  V  I  D  R  T  T  L  D  S  I  S  I  A  Q  L  K  L  R  V  P  W  N  V  L  F  G  N  I  L  K  N  N  V  C  V  V  G  D  A  L  H  P  M  T  P  D  L  G  Q  G  G  C  S  A  L  E  D  S  V  V  I  A  K  C  L  A  E  A  L  I  K  P  I  T  E  Q  E  D  D  E  S  M  R  I  R  K  G  L  E  K  Y  A  K  E  R  R  W  R  S  F  T  F  I  S  A  A  Y  L  S  G  F  I  Q  E  T  D  N  K  I  I  S  F  L  R  Q  H  F  L  G  G  V  T  I  S  V  T  L  K  I  A  N  F  D  C  G  K  L  A  V  S  *  *  L  Q  L  D  P  L  E  A  M  N  I  F  Y  G  L  C  L  I  S  I  *  H  T  C  S  G  L  V  V  S  K  E  L  </first_frame>
            <second_frame>  *  L  K  I  K  L  G  E  T  E  K  *  W  R  L  K  K  I  L  *  L  L  V  L  V  *  L  V  L  L  L  L  W  P  F  T   : D  W  G  C  G  V  L  C  W  N  Q  L  I  R  C  E  L  L  D  L  H  W  R  C  G  L  M  P  G  E  L  W  M  H  W  T  L  G  T  L  L  D  N  V  L  Y  P  L  L   : G  L  K  V  S  Q  R  N  Q  V  H  L  S  R  R  Y  H  L  W  G  I  T   : V  W  S  M  K  V  V  V  *  E  E  K  I  C  W  R  H  *  L  M  N  C  L  K  A  L  L  D  I  L  L  R  *  I  P  L  K  Y  L  D  H  *  N  W  Y  I  L  Q  M  V  A  L  L  E  P  R :   P  *  L  G  V  T  E  S  I  L  W  W  Q  T  G  L  G  F  R  N  L  S  I  L  G  A  L  Q  L  E  A  L  L  S  I  P  K  N  M  V  I  S  L  S  S  T  H  I  L  E  V  E  F  G  L  D  F  F  L  V  M  R  R  V  Y  T  G  F  A  H  S  H  H  L  L  F  I  V  S  H  L  L  H  T  V  S  F  E  D  L  L  F  E  G  Y  W  C  W  L  E  S  L  T  L  *  S  G  S  L  D  V  I  G  K  V  T  V  M  *  P  R  G  Y  G  S  E  L  *  K  Q  P  L  A  E  M  Q  V  K  I  A  Y  I  S  S  L  W  S  R  P  S  P  E  P  C  A  *  Q  A  L  S  A  P  S  C  L  D  I  L  H  L  I  N  *  S  C  L  V  V  H  F  N  W  D  F  M  Q  L  M  E  M  Q  N  K  I  Q  L  N  *  S  N  S  C  *  T  R  P  V  M  C  L  K  N  S  P  P  L  *  T  E  Q  L  S  T  L  Y  L  L  L  S  *  N  *  E  Y  H  G  M  F  C  L  G  I  F  *  K  I  T  S  V  W  *  V  M  H  F  I  P  *  L  L  I  L  V  K  V  D  V  L  L  *  R  T  V  L  L  S  Q  S  A  L  Q  K  P  *  *  N  R  *  Q  N  K  K  T  M  N  L  *  G  L  E  K  D  S  R  N  M  L  K  R  G  D  G  E  V  L  H  L  S  V  L  L  I  Y  L  V  S  Y  K  R  L  I  T  R  *  S  V  S  *  D  N  I  F  *  V  E  L  L  Y  Q  L  H  *  K  L  L  T  S  T  A  E  N  *  L  F  L  S  S  S  N  W  I  L  *  R  L  *  I  S  F  M  D  F  V  *  Y  L  S  S  I  H  V  P  V  *  L  C  L  K  N  C </second_frame>
            <third_frame>   N  *  K  L  N  W  E  K  Q  R  N  N  G  D  *  R  K  Y  C  N  C  W  C  W  Y  S  W  S  C  Y  F  F  G  P  S  Q  :  I  G  A  A  E  Y  C  V  G  I  S  *  F  V  A  S  Y  W  I  C  I  G  V  V  D  *  C  L  E  S  F  G  C  I  G  H  W  G  L  S  *  T  T  F  F  I  H  Y  W  :  V  *  K  F  L  S  G  I  R  C  T  Y  H  G  G  I  I  C  G  E  *  Q  :  C  G  V  *  K  S  L  C  E  K  K  R  S  V  G  D  I  S  *  *  T  A  S  R  R  Y  *  I  F  F  *  G  R  F  R  *  S  I  W  T  I  E  I  G  T  S  C  R  W  L  H  Y  *  N  Q   : G  L  N  W  V  *  R  S  Q  F  C  G  G  K  L  A  W  A  S  E  T  C  L  F  W  A  L  C  N  *  R  L  C  *  V  S  R  K  T  W  L  S  A  *  V  P  R  I  F  W  R  W  S  S  V  W  I  S  S  *  *  *  E  E  F  I  L  V  L  H  I  H  T  I  C  C  S  L  *  A  T  S  Y  I  P  F  L  L  K  I  Y  F  L  K  D  I  G  V  G  *  R  A  *  L  S  E  V  G  A  L  T  *  L  V  K  L  L  S  C  D  L  E  V  T  D  P  S  C  R  N  S  L  L  Q  K  C  R  L  R  L  H  T  L  V  P  C  G  P  G  L  P  P  N  P  V  H  S  R  R  L  V  H  R  A  V  *  I  S  Y  I  S  *  T  S  H  V  *  L  F  I  L  I  G  I  L  C  S  *  W  K  C  R  T  R  S  N  *  I  E  A  I  R  V  E  Q  G  Q  *  C  V  *  R  T  L  H  R  Y  R  Q  N  N  S  R  L  Y  I  Y  C  S  A  E  I  E  S  T  M  E  C  S  V  W  E  Y  F  E  K  *  R  L  C  G  R  *  C  T  S  S  H  D  S  *  S  W  S  R  W  M  F  C  F  R  G  Q  C  C  Y  R  K  V  P  C  R  S  L  D  K  T  D  N  R  T  R  R  R  *  I  Y  E  D  *  K  R  T  R  E  I  C  *  R  E  E  M  E  K  F  Y  I  Y  Q  C  C  L  F  I  W  F  H  T  R  D  *  *  Q  D  N  Q  F  L  K  T  T  F  F  R  W  S  Y  Y  I  S  Y  T  K  N  C  *  L  R  L  R  K  T  S  C  F  L  V  A  P  I  G  S  F  R  G  Y  E  Y  L  L  W  T  L  F  N  I  Y  L  A  Y  M  F  R  F  S  C  V  *  R  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23498" stop="23592"/>
                    <exon start="24080" stop="24226"/>
                    <exon start="24365" stop="24430"/>
                    <exon start="24890" stop="25055"/>
                    <exon start="25155" stop="25418"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>735</number_coding_nucleotides>
                  <number_encoded_amino_acids>245</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGRNREIMETEENIVIVGAGIAGLATSLALHRLGLRSIVLESADSLRATGFALALWTNAWRALDALDIGDSLRQRSLSITGFKSFSAESGAPITEVSFVGNNSVEYESRCVRRKDLLETLANELPQGAIRYSSKVDSVEVSGPLKLVHLADGCTIRTKALIGCDGVNSVVANWLGLQKPVYSGRSAIRGFVEYPEKHGYQPKFHAYFGGGVRFGFLPSDEKSLYWFCTFTPSVVHCKPPLTYRFF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25698" stop="26252"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LGFYAVDGNAEQDPIKLKQFVLNKASNVSKELSTVIDRTTLDSISIAQLKLRVPWNVLFGNILKNNVCVVGDALHPMTPDLGQGGCSALEDSVVIAKCLAEALIKPITEQEDDESMRIRKGLEKYAKERRWRSFTFISAAYLSGFIQETDNKIISFLRQHFLGGVTISVTLKIANFDCGKLAVS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="23483" e_stop="23592"/>
            <exon e_start="24080" e_stop="24226"/>
            <exon e_start="24365" e_stop="24430"/>
            <exon e_start="24890" e_stop="25386"/>
            <exon e_start="25714" e_stop="26469"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.822" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="23483" e_stop="23592" e_length="110"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.914">
            <gDNA_intron_boundary i_start="23593" i_stop="24079" i_length="487"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24080" e_stop="24226" e_length="147"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.979">
            <gDNA_intron_boundary i_start="24227" i_stop="24364" i_length="138"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24365" e_stop="24430" e_length="66"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.972">
            <gDNA_intron_boundary i_start="24431" i_stop="24889" i_length="459"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24890" e_stop="25386" e_length="497"/>
          </exon>
          <intron i_serial="4" don_prob="0.822" acc_prob="0.997">
            <gDNA_intron_boundary i_start="25387" i_stop="25713" i_length="327"/>
          </intron>
          <exon e_serial="5" e_score="0.996">
            <gDNA_exon_boundary e_start="25714" e_stop="26469" e_length="756"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23483" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213319" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23505" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24918"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E407849" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23506" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25049"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248435" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23507" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24922"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200988" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23510" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25019"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261790" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23515" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E208811" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23515" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25017"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203827" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23520" stop="23592"/>
              <exon start="24080" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="24940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E477088" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24218" stop="24226"/>
              <exon start="24365" stop="24430"/>
              <exon start="24890" stop="25046"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256868" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25209" stop="25386"/>
              <exon start="25714" stop="26469"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702813" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25209" stop="25386"/>
              <exon start="25714" stop="26345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E700391" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25235" stop="25386"/>
              <exon start="25714" stop="26239"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E257290" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25295" stop="25386"/>
              <exon start="25714" stop="26224"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214955" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25312" stop="25386"/>
              <exon start="25714" stop="26333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355445" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25320" stop="25386"/>
              <exon start="25714" stop="26144"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256324" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25326" stop="25386"/>
              <exon start="25714" stop="26418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E457836" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25326" stop="25386"/>
              <exon start="25714" stop="26412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429735" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25332" stop="25386"/>
              <exon start="25714" stop="26420"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E429736" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25335" stop="25386"/>
              <exon start="25714" stop="25940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E710665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25836" stop="26335"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25836" stop="26304"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25837" stop="26355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255457" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25913" stop="26325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E286818" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTAATTAAAAATTAAATTGGGAGAAACAGAGAAATAATGGAGACTGAAGAAAATATTGTAATTGTTGGTGCTGGTATAGCTGGTCTTGCTACTTCTTTGGCCCTTCACAG : ATTGGGGCTGCGGAGTATTGTGTTGGAATCAGCTGATTCGTTGCGAGCTACTGGATTTGCATTGGCGTTGTGGACTAATGCCTGGAGAGCTTTGGATGCATTGGACATTGGGGACTCTCTTAGACAACGTTCTTTATCCATTACTGG : GTTTAAAAGTTTCTCAGCGGAATCAGGTGCACCTATCACGGAGGTATCATTTGTGGGGAATAACAG : TGTGGAGTATGAAAGTCGTTGTGTGAGAAGAAAAGATCTGTTGGAGACATTAGCTAATGAACTGCCTCAAGGCGCTATTAGATATTCTTCTAAGGTAGATTCCGTTGAAGTATCTGGACCATTGAAATTGGTACATCTTGCAGATGGTTGCACTATTAGAACCAAGGTAAATCTTTCACTGATATATCAGACGTGTTTTTGACCATTATATCAATTCCTTACGTTAGTCTTAACACGTGACTAACTTTAATAAGCTTCAATTAAGGCCTTAATTGGGTGTGACGGAGTCAATTCTGTGGTGGCAAACTGGCTTGGGCTTCAGAAACCTGTCTATTCTGGGCGCTCTGCAATTAGAGGCTTTGTTGAGTATCCCGAAAAACATGGTTATCAGCCTAAGTTCCACGCATATTTTGGAGGTGGAGTTCGGTTTGGATTTCTTCCTAGTGATGAGAAGAGTTTATACTGGTTTTGCACATTCACACCATCTGTTGTTCATT : TTGATGGAAATGCAGAACAAGATCCAATTAAATTGAAGCAATTCGTGTTGAACAAGGCCAGTAATGTGTCTAAAGAACTCTCCACCGTTATAGACAGAACAACTCTCGACTCTATATCTATTGCTCAGCTGAAATTGAGAGTACCATGGAATGTTCTGTTTGGGAATATTTTGAAAAATAACGTCTGTGTGGTAGGTGATGCACTTCATCCCATGACTCCTGATCTTGGTCAAGGTGGATGTTCTGCTTTAGAGGACAGTGTTGTTATCGCAAAGTGCCTTGCAGAAGCCTTGATAAAACCGATAACAGAACAAGAAGACGATGAATCTATGAGGATTAGAAAAGGACTCGAGAAATATGCTAAAGAGAGGAGATGGAGAAGTTTTACATTTATCAGTGCTGCTTATTTATCTGGTTTCATACAAGAGACTGATAACAAGATAATCAGTTTCTTAAGACAACATTTTTTAGGTGGAGTTACTATATCAGTTACACTAAAAATTGCTAACTTCGACTGCGGAAAACTAGCTGTTTCTTAGTAGCTCCAATTGGATCCTTTAGAGGCTATGAATATCTTTTATGGACTTTGTTTAATATCTATCTAGCATACATGTTCCGGTTTAGTTGTGTCTAAAGAATTGTAAGACCGAGTCGGATCCTTATTTTGCAATAATGAAATTGTGTACTACATCAAAGATATCCAAGAACATCAGTTGTTTAGAAGCAAATATGGTAACATCTGCATTTTATAATTAT</gDNA_template>
            <first_frame> L  I  K  N  *  I  G  R  N  R  E  I  M  E  T  E  E  N  I  V  I  V  G  A  G  I  A  G  L  A  T  S  L  A  L  H  R :   L  G  L  R  S  I  V  L  E  S  A  D  S  L  R  A  T  G  F  A  L  A  L  W  T  N  A  W  R  A  L  D  A  L  D  I  G  D  S  L  R  Q  R  S  L  S  I  T  G :   F  K  S  F  S  A  E  S  G  A  P  I  T  E  V  S  F  V  G  N  N  S :   V  E  Y  E  S  R  C  V  R  R  K  D  L  L  E  T  L  A  N  E  L  P  Q  G  A  I  R  Y  S  S  K  V  D  S  V  E  V  S  G  P  L  K  L  V  H  L  A  D  G  C  T  I  R  T  K  V  N  L  S  L  I  Y  Q  T  C  F  *  P  L  Y  Q  F  L  T  L  V  L  T  R  D  *  L  *  *  A  S  I  K  A  L  I  G  C  D  G  V  N  S  V  V  A  N  W  L  G  L  Q  K  P  V  Y  S  G  R  S  A  I  R  G  F  V  E  Y  P  E  K  H  G  Y  Q  P  K  F  H  A  Y  F  G  G  G  V  R  F  G  F  L  P  S  D  E  K  S  L  Y  W  F  C  T  F  T  P  S  V  V  H   : F  D  G  N  A  E  Q  D  P  I  K  L  K  Q  F  V  L  N  K  A  S  N  V  S  K  E  L  S  T  V  I  D  R  T  T  L  D  S  I  S  I  A  Q  L  K  L  R  V  P  W  N  V  L  F  G  N  I  L  K  N  N  V  C  V  V  G  D  A  L  H  P  M  T  P  D  L  G  Q  G  G  C  S  A  L  E  D  S  V  V  I  A  K  C  L  A  E  A  L  I  K  P  I  T  E  Q  E  D  D  E  S  M  R  I  R  K  G  L  E  K  Y  A  K  E  R  R  W  R  S  F  T  F  I  S  A  A  Y  L  S  G  F  I  Q  E  T  D  N  K  I  I  S  F  L  R  Q  H  F  L  G  G  V  T  I  S  V  T  L  K  I  A  N  F  D  C  G  K  L  A  V  S  *  *  L  Q  L  D  P  L  E  A  M  N  I  F  Y  G  L  C  L  I  S  I  *  H  T  C  S  G  L  V  V  S  K  E  L  *  D  R  V  G  S  L  F  C  N  N  E  I  V  Y  Y  I  K  D  I  Q  E  H  Q  L  F  R  S  K  Y  G  N  I  C  I  L  *  L  </first_frame>
            <second_frame>  *  L  K  I  K  L  G  E  T  E  K  *  W  R  L  K  K  I  L  *  L  L  V  L  V  *  L  V  L  L  L  L  W  P  F  T   : D  W  G  C  G  V  L  C  W  N  Q  L  I  R  C  E  L  L  D  L  H  W  R  C  G  L  M  P  G  E  L  W  M  H  W  T  L  G  T  L  L  D  N  V  L  Y  P  L  L   : G  L  K  V  S  Q  R  N  Q  V  H  L  S  R  R  Y  H  L  W  G  I  T   : V  W  S  M  K  V  V  V  *  E  E  K  I  C  W  R  H  *  L  M  N  C  L  K  A  L  L  D  I  L  L  R  *  I  P  L  K  Y  L  D  H  *  N  W  Y  I  L  Q  M  V  A  L  L  E  P  R  *  I  F  H  *  Y  I  R  R  V  F  D  H  Y  I  N  S  L  R  *  S  *  H  V  T  N  F  N  K  L  Q  L  R  P  *  L  G  V  T  E  S  I  L  W  W  Q  T  G  L  G  F  R  N  L  S  I  L  G  A  L  Q  L  E  A  L  L  S  I  P  K  N  M  V  I  S  L  S  S  T  H  I  L  E  V  E  F  G  L  D  F  F  L  V  M  R  R  V  Y  T  G  F  A  H  S  H  H  L  L  F  I  :  L  M  E  M  Q  N  K  I  Q  L  N  *  S  N  S  C  *  T  R  P  V  M  C  L  K  N  S  P  P  L  *  T  E  Q  L  S  T  L  Y  L  L  L  S  *  N  *  E  Y  H  G  M  F  C  L  G  I  F  *  K  I  T  S  V  W  *  V  M  H  F  I  P  *  L  L  I  L  V  K  V  D  V  L  L  *  R  T  V  L  L  S  Q  S  A  L  Q  K  P  *  *  N  R  *  Q  N  K  K  T  M  N  L  *  G  L  E  K  D  S  R  N  M  L  K  R  G  D  G  E  V  L  H  L  S  V  L  L  I  Y  L  V  S  Y  K  R  L  I  T  R  *  S  V  S  *  D  N  I  F  *  V  E  L  L  Y  Q  L  H  *  K  L  L  T  S  T  A  E  N  *  L  F  L  S  S  S  N  W  I  L  *  R  L  *  I  S  F  M  D  F  V  *  Y  L  S  S  I  H  V  P  V  *  L  C  L  K  N  C  K  T  E  S  D  P  Y  F  A  I  M  K  L  C  T  T  S  K  I  S  K  N  I  S  C  L  E  A  N  M  V  T  S  A  F  Y  N  Y </second_frame>
            <third_frame>   N  *  K  L  N  W  E  K  Q  R  N  N  G  D  *  R  K  Y  C  N  C  W  C  W  Y  S  W  S  C  Y  F  F  G  P  S  Q  :  I  G  A  A  E  Y  C  V  G  I  S  *  F  V  A  S  Y  W  I  C  I  G  V  V  D  *  C  L  E  S  F  G  C  I  G  H  W  G  L  S  *  T  T  F  F  I  H  Y  W  :  V  *  K  F  L  S  G  I  R  C  T  Y  H  G  G  I  I  C  G  E  *  Q  :  C  G  V  *  K  S  L  C  E  K  K  R  S  V  G  D  I  S  *  *  T  A  S  R  R  Y  *  I  F  F  *  G  R  F  R  *  S  I  W  T  I  E  I  G  T  S  C  R  W  L  H  Y  *  N  Q  G  K  S  F  T  D  I  S  D  V  F  L  T  I  I  S  I  P  Y  V  S  L  N  T  *  L  T  L  I  S  F  N  *  G  L  N  W  V  *  R  S  Q  F  C  G  G  K  L  A  W  A  S  E  T  C  L  F  W  A  L  C  N  *  R  L  C  *  V  S  R  K  T  W  L  S  A  *  V  P  R  I  F  W  R  W  S  S  V  W  I  S  S  *  *  *  E  E  F  I  L  V  L  H  I  H  T  I  C  C  S  F :   *  W  K  C  R  T  R  S  N  *  I  E  A  I  R  V  E  Q  G  Q  *  C  V  *  R  T  L  H  R  Y  R  Q  N  N  S  R  L  Y  I  Y  C  S  A  E  I  E  S  T  M  E  C  S  V  W  E  Y  F  E  K  *  R  L  C  G  R  *  C  T  S  S  H  D  S  *  S  W  S  R  W  M  F  C  F  R  G  Q  C  C  Y  R  K  V  P  C  R  S  L  D  K  T  D  N  R  T  R  R  R  *  I  Y  E  D  *  K  R  T  R  E  I  C  *  R  E  E  M  E  K  F  Y  I  Y  Q  C  C  L  F  I  W  F  H  T  R  D  *  *  Q  D  N  Q  F  L  K  T  T  F  F  R  W  S  Y  Y  I  S  Y  T  K  N  C  *  L  R  L  R  K  T  S  C  F  L  V  A  P  I  G  S  F  R  G  Y  E  Y  L  L  W  T  L  F  N  I  Y  L  A  Y  M  F  R  F  S  C  V  *  R  I  V  R  P  S  R  I  L  I  L  Q  *  *  N  C  V  L  H  Q  R  Y  P  R  T  S  V  V  *  K  Q  I  W  *  H  L  H  F  I  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25143" stop="25386"/>
                    <exon start="25714" stop="26252"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>780</number_coding_nucleotides>
                  <number_encoded_amino_acids>260</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASIKALIGCDGVNSVVANWLGLQKPVYSGRSAIRGFVEYPEKHGYQPKFHAYFGGGVRFGFLPSDEKSLYWFCTFTPSVVHFDGNAEQDPIKLKQFVLNKASNVSKELSTVIDRTTLDSISIAQLKLRVPWNVLFGNILKNNVCVVGDALHPMTPDLGQGGCSALEDSVVIAKCLAEALIKPITEQEDDESMRIRKGLEKYAKERRWRSFTFISAAYLSGFIQETDNKIISFLRQHFLGGVTISVTLKIANFDCGKLAVS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23498" stop="23592"/>
                    <exon start="24080" stop="24226"/>
                    <exon start="24365" stop="24430"/>
                    <exon start="24890" stop="25091"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>507</number_coding_nucleotides>
                  <number_encoded_amino_acids>169</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IGRNREIMETEENIVIVGAGIAGLATSLALHRLGLRSIVLESADSLRATGFALALWTNAWRALDALDIGDSLRQRSLSITGFKSFSAESGAPITEVSFVGNNSVEYESRCVRRKDLLETLANELPQGAIRYSSKVDSVEVSGPLKLVHLADGCTIRTKVNLSLIYQTCF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="26903" PGL_stop="25676"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26903" e_stop="26881"/>
            <exon e_start="26505" e_stop="25676"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.596" acc_prob="0.000" e_score="0.609"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.609">
            <gDNA_exon_boundary e_start="26903" e_stop="26881" e_length="23"/>
          </exon>
          <intron i_serial="1" don_prob="0.596" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26880" i_stop="26506" i_length="375"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="26505" e_stop="25676" e_length="830"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26903" stop="26881"/>
              <exon start="26505" stop="25835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263201" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26903" stop="26881"/>
              <exon start="26505" stop="25972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254423" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26903" stop="26881"/>
              <exon start="26505" stop="26044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262720" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26468" stop="26083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26465" stop="26157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26429" stop="25676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26429" stop="25716"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TACTCACTATGTTCTAACTTTCT : TAATCTCAGATAAGAAAACACTTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTGAGCAATAGATATAGAGTCGAGAGTTGTTCTGTCTATAACGGTGGAGAGTTCTTTAGACACATTACTGGCCTTGTTCAACACGAATTGCTTCAATTTAATTGGATCTTGTTCTGCATTTCCATCAACTGCATAAAATCCCAATTAAAATGAACAACTAAACATG</gDNA_template>
            <first_frame> Y  S  L  C  S  N  F  L :   N  L  R  *  E  N  T  Y  S  I  P  *  *  L  *  N  A  D  V  T  I  F  A  S  K  Q  L  M  F  L  D  I  F  D  V  V  H  N  F  I  I  A  K  *  G  S  D  S  V  L  Q  F  F  R  H  N  *  T  G  T  C  M  L  D  R  Y  *  T  K  S  I  K  D  I  H  S  L  *  R  I  Q  L  E  L  L  R  N  S  *  F  S  A  V  E  V  S  N  F  *  C  N  *  Y  S  N  S  T  *  K  M  L  S  *  E  T  D  Y  L  V  I  S  L  L  Y  E  T  R  *  I  S  S  T  D  K  C  K  T  S  P  S  P  L  F  S  I  F  L  E  S  F  S  N  P  H  R  F  I  V  F  L  F  C  Y  R  F  Y  Q  G  F  C  K  A  L  C  D  N  N  T  V  L  *  S  R  T  S  T  L  T  K  I  R  S  H  G  M  K  C  I  T  Y  H  T  D  V  I  F  Q  N  I  P  K  Q  N  I  P  W  Y  S  Q  F  Q  L  S  N  R  Y  R  V  E  S  C  S  V  Y  N  G  G  E  F  F  R  H  I  T  G  L  V  Q  H  E  L  L  Q  F  N  W  I  L  F  C  I  S  I  N  C  I  K  S  Q  L  K  *  T  T  K  H  </first_frame>
            <second_frame>  T  H  Y  V  L  T  F   : L  I  S  D  K  K  T  L  I  L  F  H  D  N  Y  K  M  Q  M  L  P  Y  L  L  L  N  N  *  C  S  W  I  S  L  M  *  Y  T  I  S  L  L  Q  N  K  D  P  T  R  S  Y  N  S  L  D  T  T  K  P  E  H  V  C  *  I  D  I  K  Q  S  P  *  K  I  F  I  A  S  K  G  S  N  W  S  Y  *  E  T  A  S  F  P  Q  S  K  L  A  I  F  S  V  T  D  I  V  T  P  P  K  K  C  C  L  K  K  L  I  I  L  L  S  V  S  C  M  K  P  D  K  *  A  A  L  I  N  V  K  L  L  H  L  L  S  L  A  Y  F  S  S  P  F  L  I  L  I  D  S  S  S  S  C  S  V  I  G  F  I  K  A  S  A  R  H  F  A  I  T  T  L  S  S  K  A  E  H  P  P  *  P  R  S  G  V  M  G  *  S  A  S  P  T  T  Q  T  L  F  F  K  I  F  P  N  R  T  F  H  G  T  L  N  F  S  *  A  I  D  I  E  S  R  V  V  L  S  I  T  V  E  S  S  L  D  T  L  L  A  L  F  N  T  N  C  F  N  L  I  G  S  C  S  A  F  P  S  T  A  *  N  P  N  *  N  E  Q  L  N  M </second_frame>
            <third_frame>   L  T  M  F  *  L  S  :  *  S  Q  I  R  K  H  L  F  Y  S  M  I  I  I  K  C  R  C  Y  H  I  C  F  *  T  T  D  V  L  G  Y  L  *  C  S  T  Q  F  H  Y  C  K  I  R  I  R  L  G  L  T  I  L  *  T  Q  L  N  R  N  M  Y  A  R  *  I  L  N  K  V  H  K  R  Y  S  *  P  L  K  D  P  I  G  A  T  K  K  Q  L  V  F  R  S  R  S  *  Q  F  L  V  *  L  I  *  *  L  H  L  K  N  V  V  L  R  N  *  L  S  C  Y  Q  S  L  V  *  N  Q  I  N  K  Q  H  *  *  M  *  N  F  S  I  S  S  L  *  H  I  S  R  V  L  F  *  S  S  *  I  H  R  L  L  V  L  L  S  V  L  S  R  L  L  Q  G  T  L  R  *  Q  H  C  P  L  K  Q  N  I  H  L  D  Q  D  Q  E  S  W  D  E  V  H  H  L  P  H  R  R  Y  F  S  K  Y  S  Q  T  E  H  S  M  V  L  S  I  S  A  E  Q  *  I  *  S  R  E  L  F  C  L  *  R  W  R  V  L  *  T  H  Y  W  P  C  S  T  R  I  A  S  I  *  L  D  L  V  L  H  F  H  Q  L  H  K  I  P  I  K  M  N  N  *  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25961" stop="25689"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRTSTLTKIRSHGMKCITYHTDVIFQNIPKQNIPWYSQFQLSNRYRVESCSVYNGGEFFRHITGLVQHELLQFNWILFCISINCIKSQLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="26900" e_stop="26881"/>
            <exon e_start="26484" e_stop="25676"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.596" acc_prob="0.000" e_score="0.550"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.550">
            <gDNA_exon_boundary e_start="26900" e_stop="26881" e_length="20"/>
          </exon>
          <intron i_serial="1" don_prob="0.596" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26880" i_stop="26485" i_length="396"/>
          </intron>
          <exon e_serial="2" e_score="0.987">
            <gDNA_exon_boundary e_start="26484" e_stop="25676" e_length="809"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26900" stop="26881"/>
              <exon start="26484" stop="25839"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254385" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26468" stop="26083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26465" stop="26157"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369853" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26429" stop="25676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369984" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26429" stop="25716"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369909" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCACTATGTTCTAACTTTCT : TTATTCTATTCCATGATAATTATAAAATGCAGATGTTACCATATTTGCTTCTAAACAACTGATGTTCTTGGATATCTTTGATGTAGTACACAATTTCATTATTGCAAAATAAGGATCCGACTCGGTCTTACAATTCTTTAGACACAACTAAACCGGAACATGTATGCTAGATAGATATTAAACAAAGTCCATAAAAGATATTCATAGCCTCTAAAGGATCCAATTGGAGCTACTAAGAAACAGCTAGTTTTCCGCAGTCGAAGTTAGCAATTTTTAGTGTAACTGATATAGTAACTCCACCTAAAAAATGTTGTCTTAAGAAACTGATTATCTTGTTATCAGTCTCTTGTATGAAACCAGATAAATAAGCAGCACTGATAAATGTAAAACTTCTCCATCTCCTCTCTTTAGCATATTTCTCGAGTCCTTTTCTAATCCTCATAGATTCATCGTCTTCTTGTTCTGTTATCGGTTTTATCAAGGCTTCTGCAAGGCACTTTGCGATAACAACACTGTCCTCTAAAGCAGAACATCCACCTTGACCAAGATCAGGAGTCATGGGATGAAGTGCATCACCTACCACACAGACGTTATTTTTCAAAATATTCCCAAACAGAACATTCCATGGTACTCTCAATTTCAGCTGAGCAATAGATATAGAGTCGAGAGTTGTTCTGTCTATAACGGTGGAGAGTTCTTTAGACACATTACTGGCCTTGTTCAACACGAATTGCTTCAATTTAATTGGATCTTGTTCTGCATTTCCATCAACTGCATAAAATCCCAATTAAAATGAACAACTAAACATG</gDNA_template>
            <first_frame> S  L  C  S  N  F  L :   Y  S  I  P  *  *  L  *  N  A  D  V  T  I  F  A  S  K  Q  L  M  F  L  D  I  F  D  V  V  H  N  F  I  I  A  K  *  G  S  D  S  V  L  Q  F  F  R  H  N  *  T  G  T  C  M  L  D  R  Y  *  T  K  S  I  K  D  I  H  S  L  *  R  I  Q  L  E  L  L  R  N  S  *  F  S  A  V  E  V  S  N  F  *  C  N  *  Y  S  N  S  T  *  K  M  L  S  *  E  T  D  Y  L  V  I  S  L  L  Y  E  T  R  *  I  S  S  T  D  K  C  K  T  S  P  S  P  L  F  S  I  F  L  E  S  F  S  N  P  H  R  F  I  V  F  L  F  C  Y  R  F  Y  Q  G  F  C  K  A  L  C  D  N  N  T  V  L  *  S  R  T  S  T  L  T  K  I  R  S  H  G  M  K  C  I  T  Y  H  T  D  V  I  F  Q  N  I  P  K  Q  N  I  P  W  Y  S  Q  F  Q  L  S  N  R  Y  R  V  E  S  C  S  V  Y  N  G  G  E  F  F  R  H  I  T  G  L  V  Q  H  E  L  L  Q  F  N  W  I  L  F  C  I  S  I  N  C  I  K  S  Q  L  K  *  T  T  K  H  </first_frame>
            <second_frame>  H  Y  V  L  T  F   : F  I  L  F  H  D  N  Y  K  M  Q  M  L  P  Y  L  L  L  N  N  *  C  S  W  I  S  L  M  *  Y  T  I  S  L  L  Q  N  K  D  P  T  R  S  Y  N  S  L  D  T  T  K  P  E  H  V  C  *  I  D  I  K  Q  S  P  *  K  I  F  I  A  S  K  G  S  N  W  S  Y  *  E  T  A  S  F  P  Q  S  K  L  A  I  F  S  V  T  D  I  V  T  P  P  K  K  C  C  L  K  K  L  I  I  L  L  S  V  S  C  M  K  P  D  K  *  A  A  L  I  N  V  K  L  L  H  L  L  S  L  A  Y  F  S  S  P  F  L  I  L  I  D  S  S  S  S  C  S  V  I  G  F  I  K  A  S  A  R  H  F  A  I  T  T  L  S  S  K  A  E  H  P  P  *  P  R  S  G  V  M  G  *  S  A  S  P  T  T  Q  T  L  F  F  K  I  F  P  N  R  T  F  H  G  T  L  N  F  S  *  A  I  D  I  E  S  R  V  V  L  S  I  T  V  E  S  S  L  D  T  L  L  A  L  F  N  T  N  C  F  N  L  I  G  S  C  S  A  F  P  S  T  A  *  N  P  N  *  N  E  Q  L  N  M </second_frame>
            <third_frame>   T  M  F  *  L  S  :  L  F  Y  S  M  I  I  I  K  C  R  C  Y  H  I  C  F  *  T  T  D  V  L  G  Y  L  *  C  S  T  Q  F  H  Y  C  K  I  R  I  R  L  G  L  T  I  L  *  T  Q  L  N  R  N  M  Y  A  R  *  I  L  N  K  V  H  K  R  Y  S  *  P  L  K  D  P  I  G  A  T  K  K  Q  L  V  F  R  S  R  S  *  Q  F  L  V  *  L  I  *  *  L  H  L  K  N  V  V  L  R  N  *  L  S  C  Y  Q  S  L  V  *  N  Q  I  N  K  Q  H  *  *  M  *  N  F  S  I  S  S  L  *  H  I  S  R  V  L  F  *  S  S  *  I  H  R  L  L  V  L  L  S  V  L  S  R  L  L  Q  G  T  L  R  *  Q  H  C  P  L  K  Q  N  I  H  L  D  Q  D  Q  E  S  W  D  E  V  H  H  L  P  H  R  R  Y  F  S  K  Y  S  Q  T  E  H  S  M  V  L  S  I  S  A  E  Q  *  I  *  S  R  E  L  F  C  L  *  R  W  R  V  L  *  T  H  Y  W  P  C  S  T  R  I  A  S  I  *  L  D  L  V  L  H  F  H  Q  L  H  K  I  P  I  K  M  N  N  *  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25961" stop="25689"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>270</number_coding_nucleotides>
                  <number_encoded_amino_acids>90</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SRTSTLTKIRSHGMKCITYHTDVIFQNIPKQNIPWYSQFQLSNRYRVESCSVYNGGEFFRHITGLVQHELLQFNWILFCISINCIKSQLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="38168" PGL_stop="37583"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="38168" e_stop="37583"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.949"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.949">
            <gDNA_exon_boundary e_start="38168" e_stop="37583" e_length="586"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="38168" stop="37583"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E330288" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCTGTATCATCCAGGGAAGGCCAATGTTGTGGCCGATGCTTTGAGTAGGAAGACTCATAGCATGGGGAGTCTTGCATCTCTTAGTGTTGAGGAGATACCATTGGCTAGAGATGTTCAATTGTTAGCTAACAGTCTTGTCCGATTACAGATCTTAGAAGAGAGTGATAGGATGATTGCTTTTATTGAGGCTCGATCTTCTTTAGTCGAGCAGATTCGTGCACCAGTTTGATGATGAAAAATTATGTCTCATTCGAGACAAAGTATTGAGAGGGGAAGCTAAAGAGGTTGTCCTTGATTCTGATGGTGTCTTGAGGATCGGAGGCAGGATTTGTGTGCCCAAGACAGGCAATTTGATTAGATTGATCCTTGAGGAGGCCCATTGTTCTCGATATTCTATCCATCCGGGTGCGGCGAAGATGTATCATGATCTGAGTCAGCATTACTGGTGGTGTGGGATGAAGAGAGATATTTCAGACTTTGTTTCGAGGTGTTTGACTTGCCAGCAGGTCAAGTGTGAGCACCAGCGGCCCAGGGGTGTATCTCAGAGGATGCCTATTCCTACTTGGAAGTGGGAGCGGATTACTA</gDNA_template>
            <first_frame> F  C  I  I  Q  G  R  P  M  L  W  P  M  L  *  V  G  R  L  I  A  W  G  V  L  H  L  L  V  L  R  R  Y  H  W  L  E  M  F  N  C  *  L  T  V  L  S  D  Y  R  S  *  K  R  V  I  G  *  L  L  L  L  R  L  D  L  L  *  S  S  R  F  V  H  Q  F  D  D  E  K  L  C  L  I  R  D  K  V  L  R  G  E  A  K  E  V  V  L  D  S  D  G  V  L  R  I  G  G  R  I  C  V  P  K  T  G  N  L  I  R  L  I  L  E  E  A  H  C  S  R  Y  S  I  H  P  G  A  A  K  M  Y  H  D  L  S  Q  H  Y  W  W  C  G  M  K  R  D  I  S  D  F  V  S  R  C  L  T  C  Q  Q  V  K  C  E  H  Q  R  P  R  G  V  S  Q  R  M  P  I  P  T  W  K  W  E  R  I  T  </first_frame>
            <second_frame>  S  V  S  S  R  E  G  Q  C  C  G  R  C  F  E  *  E  D  S  *  H  G  E  S  C  I  S  *  C  *  G  D  T  I  G  *  R  C  S  I  V  S  *  Q  S  C  P  I  T  D  L  R  R  E  *  *  D  D  C  F  Y  *  G  S  I  F  F  S  R  A  D  S  C  T  S  L  M  M  K  N  Y  V  S  F  E  T  K  Y  *  E  G  K  L  K  R  L  S  L  I  L  M  V  S  *  G  S  E  A  G  F  V  C  P  R  Q  A  I  *  L  D  *  S  L  R  R  P  I  V  L  D  I  L  S  I  R  V  R  R  R  C  I  M  I  *  V  S  I  T  G  G  V  G  *  R  E  I  F  Q  T  L  F  R  G  V  *  L  A  S  R  S  S  V  S  T  S  G  P  G  V  Y  L  R  G  C  L  F  L  L  G  S  G  S  G  L  L </second_frame>
            <third_frame>   L  Y  H  P  G  K  A  N  V  V  A  D  A  L  S  R  K  T  H  S  M  G  S  L  A  S  L  S  V  E  E  I  P  L  A  R  D  V  Q  L  L  A  N  S  L  V  R  L  Q  I  L  E  E  S  D  R  M  I  A  F  I  E  A  R  S  S  L  V  E  Q  I  R  A  P  V  *  *  *  K  I  M  S  H  S  R  Q  S  I  E  R  G  S  *  R  G  C  P  *  F  *  W  C  L  E  D  R  R  Q  D  L  C  A  Q  D  R  Q  F  D  *  I  D  P  *  G  G  P  L  F  S  I  F  Y  P  S  G  C  G  E  D  V  S  *  S  E  S  A  L  L  V  V  W  D  E  E  R  Y  F  R  L  C  F  E  V  F  D  L  P  A  G  Q  V  *  A  P  A  A  Q  G  C  I  S  E  D  A  Y  S  Y  L  E  V  G  A  D  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37964" stop="37584"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>381</number_coding_nucleotides>
                  <number_encoded_amino_acids>127</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSRFVHQFDDEKLCLIRDKVLRGEAKEVVLDSDGVLRIGGRICVPKTGNLIRLILEEAHCSRYSIHPGAAKMYHDLSQHYWWCGMKRDISDFVSRCLTCQQVKCEHQRPRGVSQRMPIPTWKWERIT</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38166" stop="37939"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>225</number_coding_nucleotides>
                  <number_encoded_amino_acids>75</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LYHPGKANVVADALSRKTHSMGSLASLSVEEIPLARDVQLLANSLVRLQILEESDRMIAFIEARSSLVEQIRAPV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="40021" PGL_stop="40537"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40021" e_stop="40537"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.913"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.913">
            <gDNA_exon_boundary e_start="40021" e_stop="40537" e_length="517"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40021" stop="40537"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352040" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGTGGTACCTCTACCCCCACTTTGCTGAGCTGCAACACCACTACTAGAAACTCTGTCACCTCTACCTGACTGAACTCTGCCACGACCTCTACCCTGTGGAGCTGGTGGTCTAGTCTGGAATGAAGAATTAGGTCGAGGACCACCACGACCCCTTTGAGAAGTACACTGCCTCATTAGATGATCGGGATCTCCACAAGTAAAACAAAATCTCTGACCTGGGAACTGCTGTGTGGACCCTGAAAACCCACTATAATTGCCTCGCCCTGTAGGTCGCTGCTGTGAACCATACGAGCCTTGAACTGGTTCATAAGAACCCCTAGATGTCTGGCCAGCCTCAAATGTCGGCATAGATGCATGAATAGGTCCTCGCTGCTGAAAAGAACCACTCACTCTCTGTGATCCCCTACCTCCAGATGAGGCACCCTGAAACTGACCTGATATACGAGCTCTTTTAGGGTCCCCAAACTCCTCTCTCTCCATCAATTCCGCCTATTTGGCGGCGCTCACAATGGACTGG</gDNA_template>
            <first_frame> G  G  T  S  T  P  T  L  L  S  C  N  T  T  T  R  N  S  V  T  S  T  *  L  N  S  A  T  T  S  T  L  W  S  W  W  S  S  L  E  *  R  I  R  S  R  T  T  T  T  P  L  R  S  T  L  P  H  *  M  I  G  I  S  T  S  K  T  K  S  L  T  W  E  L  L  C  G  P  *  K  P  T  I  I  A  S  P  C  R  S  L  L  *  T  I  R  A  L  N  W  F  I  R  T  P  R  C  L  A  S  L  K  C  R  H  R  C  M  N  R  S  S  L  L  K  R  T  T  H  S  L  *  S  P  T  S  R  *  G  T  L  K  L  T  *  Y  T  S  S  F  R  V  P  K  L  L  S  L  H  Q  F  R  L  F  G  G  A  H  N  G  L  </first_frame>
            <second_frame>  V  V  P  L  P  P  L  C  *  A  A  T  P  L  L  E  T  L  S  P  L  P  D  *  T  L  P  R  P  L  P  C  G  A  G  G  L  V  W  N  E  E  L  G  R  G  P  P  R  P  L  *  E  V  H  C  L  I  R  *  S  G  S  P  Q  V  K  Q  N  L  *  P  G  N  C  C  V  D  P  E  N  P  L  *  L  P  R  P  V  G  R  C  C  E  P  Y  E  P  *  T  G  S  *  E  P  L  D  V  W  P  A  S  N  V  G  I  D  A  *  I  G  P  R  C  *  K  E  P  L  T  L  C  D  P  L  P  P  D  E  A  P  *  N  *  P  D  I  R  A  L  L  G  S  P  N  S  S  L  S  I  N  S  A  Y  L  A  A  L  T  M  D  W </second_frame>
            <third_frame>   W  Y  L  Y  P  H  F  A  E  L  Q  H  H  Y  *  K  L  C  H  L  Y  L  T  E  L  C  H  D  L  Y  P  V  E  L  V  V  *  S  G  M  K  N  *  V  E  D  H  H  D  P  F  E  K  Y  T  A  S  L  D  D  R  D  L  H  K  *  N  K  I  S  D  L  G  T  A  V  W  T  L  K  T  H  Y  N  C  L  A  L  *  V  A  A  V  N  H  T  S  L  E  L  V  H  K  N  P  *  M  S  G  Q  P  Q  M  S  A  *  M  H  E  *  V  L  A  A  E  K  N  H  S  L  S  V  I  P  Y  L  Q  M  R  H  P  E  T  D  L  I  Y  E  L  F  *  G  P  Q  T  P  L  S  P  S  I  P  P  I  W  R  R  S  Q  W  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0161H10.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="40727" PGL_stop="40299"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40727" e_stop="40299"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.935">
            <gDNA_exon_boundary e_start="40727" e_stop="40299" e_length="429"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40727" stop="40299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279140" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTTGAGGTTTGAGAGTCTGAGACAGGATGGTTTATCGGTTACAGAGTATGAGGCGCGTTTTTTCCAGTTATCTAGGCATGCGTTGGCCATTATTACAAATGAGACAGAGAGGATCCGCATATTTGTGAGGGGATTGACTTTATCTATCAGGTCAGCTGTGTTTCGGACATCTAGGGAGGGGACTTCTTTCCAGTCCATTGTGAGCGCCGCCAAATAGGCGGAATTGATGGAGAGAGAGGAGTTTGGGGACCCTAAAAGAGCTCGTATATCAGGTCAGTTTCAGGGTGCCTCATCTGGAGGTAGGGGATCACAGAGAGTGAGTGGTTCTTTTCAGCAGCGAGGACCTATTCATGCATCTATGCCGACATTTGAGGCTGGCCAGACATCTAGGGGTTCTTATGAACCAGTTCAAGGCTCGTATGGTTCAC</gDNA_template>
            <first_frame> A  *  G  L  R  V  *  D  R  M  V  Y  R  L  Q  S  M  R  R  V  F  S  S  Y  L  G  M  R  W  P  L  L  Q  M  R  Q  R  G  S  A  Y  L  *  G  D  *  L  Y  L  S  G  Q  L  C  F  G  H  L  G  R  G  L  L  S  S  P  L  *  A  P  P  N  R  R  N  *  W  R  E  R  S  L  G  T  L  K  E  L  V  Y  Q  V  S  F  R  V  P  H  L  E  V  G  D  H  R  E  *  V  V  L  F  S  S  E  D  L  F  M  H  L  C  R  H  L  R  L  A  R  H  L  G  V  L  M  N  Q  F  K  A  R  M  V  H </first_frame>
            <second_frame>  L  E  V  *  E  S  E  T  G  W  F  I  G  Y  R  V  *  G  A  F  F  P  V  I  *  A  C  V  G  H  Y  Y  K  *  D  R  E  D  P  H  I  C  E  G  I  D  F  I  Y  Q  V  S  C  V  S  D  I  *  G  G  D  F  F  P  V  H  C  E  R  R  Q  I  G  G  I  D  G  E  R  G  V  W  G  P  *  K  S  S  Y  I  R  S  V  S  G  C  L  I  W  R  *  G  I  T  E  S  E  W  F  F  S  A  A  R  T  Y  S  C  I  Y  A  D  I  *  G  W  P  D  I  *  G  F  L  *  T  S  S  R  L  V  W  F   </second_frame>
            <third_frame>   L  R  F  E  S  L  R  Q  D  G  L  S  V  T  E  Y  E  A  R  F  F  Q  L  S  R  H  A  L  A  I  I  T  N  E  T  E  R  I  R  I  F  V  R  G  L  T  L  S  I  R  S  A  V  F  R  T  S  R  E  G  T  S  F  Q  S  I  V  S  A  A  K  *  A  E  L  M  E  R  E  E  F  G  D  P  K  R  A  R  I  S  G  Q  F  Q  G  A  S  S  G  G  R  G  S  Q  R  V  S  G  S  F  Q  Q  R  G  P  I  H  A  S  M  P  T  F  E  A  G  Q  T  S  R  G  S  Y  E  P  V  Q  G  S  Y  G  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40725" stop="40510"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRFESLRQDGLSVTEYEARFFQLSRHALAIITNETERIRIFVRGLTLSIRSAVFRTSREGTSFQSIVSAAK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40509" stop="40300"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AELMEREEFGDPKRARISGQFQGASSGGRGSQRVSGSFQQRGPIHASMPTFEAGQTSRGSYEPVQGSYGS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="41146" PGL_stop="41448"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41146" e_stop="41448"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.924">
            <gDNA_exon_boundary e_start="41146" e_stop="41448" e_length="303"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41146" stop="41448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577887" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGGGTCTGAGCCCCCTCTCTAGTACGAGAGTCATGTGGTGTGGTAGTCGCACCACCACCCTGAGAAAATCCCTCTAGCACACTTAACACCCTCAATAGTGTATCTTGAAGCAAAGGTGTGACTACAGGATCTGAAGGAACCTGGTCCTCCCTACCATCAATCTGAGGTTCTGTAGAGACCTCTCTAGCACGACCTCTCACTGGTGCTGCTCCACGTCCACGACCTCTGGCTACTGTCGTACTACTAGCACGACCTCTAGCTCGAGATCTACCCCTACCCCTAGCTGGGGCCTCAACAACTGC</gDNA_template>
            <first_frame> W  G  L  S  P  L  S  S  T  R  V  M  W  C  G  S  R  T  T  T  L  R  K  S  L  *  H  T  *  H  P  Q  *  C  I  L  K  Q  R  C  D  Y  R  I  *  R  N  L  V  L  P  T  I  N  L  R  F  C  R  D  L  S  S  T  T  S  H  W  C  C  S  T  S  T  T  S  G  Y  C  R  T  T  S  T  T  S  S  S  R  S  T  P  T  P  S  W  G  L  N  N  C </first_frame>
            <second_frame>  G  V  *  A  P  S  L  V  R  E  S  C  G  V  V  V  A  P  P  P  *  E  N  P  S  S  T  L  N  T  L  N  S  V  S  *  S  K  G  V  T  T  G  S  E  G  T  W  S  S  L  P  S  I  *  G  S  V  E  T  S  L  A  R  P  L  T  G  A  A  P  R  P  R  P  L  A  T  V  V  L  L  A  R  P  L  A  R  D  L  P  L  P  L  A  G  A  S  T  T   </second_frame>
            <third_frame>   G  S  E  P  P  L  *  Y  E  S  H  V  V  W  *  S  H  H  H  P  E  K  I  P  L  A  H  L  T  P  S  I  V  Y  L  E  A  K  V  *  L  Q  D  L  K  E  P  G  P  P  Y  H  Q  S  E  V  L  *  R  P  L  *  H  D  L  S  L  V  L  L  H  V  H  D  L  W  L  L  S  Y  Y  *  H  D  L  *  L  E  I  Y  P  Y  P  *  L  G  P  Q  Q  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0161H10.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="44808" PGL_stop="46251"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="44826" e_stop="45938"/>
            <exon e_start="46011" e_stop="46246"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.944" e_score="0.952"/>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.952">
            <gDNA_exon_boundary e_start="44826" e_stop="45938" e_length="1113"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.944">
            <gDNA_intron_boundary i_start="45939" i_stop="46010" i_length="72"/>
          </intron>
          <exon e_serial="2" e_score="0.919">
            <gDNA_exon_boundary e_start="46011" e_stop="46246" e_length="236"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44826" stop="45433"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262710" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44826" stop="45404"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369760" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44826" stop="45341"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E255327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44826" stop="45056"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261310" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44836" stop="45235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262800" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44857" stop="45449"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E254845" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44858" stop="45513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273518" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44892" stop="45221"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258205" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44961" stop="45666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263584" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45001" stop="45705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261066" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45002" stop="45635"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276669" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45118" stop="45727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E253427" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45229" stop="45938"/>
              <exon start="46011" stop="46032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E262550" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45229" stop="45673"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258047" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45263" stop="45938"/>
              <exon start="46011" stop="46107"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E261540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45443" stop="45938"/>
              <exon start="46011" stop="46122"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251204" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45558" stop="45938"/>
              <exon start="46011" stop="46246"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419244" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGACACGTTCCTTGCTGAAAATGGCTATAAAATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAGGTACCGCTATTTCTTTAATAGGTTTAATCCGTTTTATCTTGGGAGAAATTAATCCATAACCTTGGGTACAGTGAGGGGATTAAATTTCTTAAGGACACACAGTAGTTTCTGTGGACTCGGATTAATTCTTCTATTTTAAATTTTTTCTGCTTCATCTTGTTTCTGTTTCTGTTCATTAACTTCATAAATACAAGTTATTGTAAGAATAACAATCTTAAGAAATTTAATAGTTTCTGTATTTAAGGTTTCTGGAGATTAAAACCTTTATGGTTTTCTACTCTGCTTGAATTTTTAAAATTCATTCGATTAACGATTAAAAGAACATAAAAACTTTATCGTTAAATCAGAAACAGTTTGTGTAAAGATTTGTTCTTTACTGTTAGTATTTTAAATACTTAATTTATCTGCCATTTGTGACAGAAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATTTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGAAGGTCATAATTCATGATCTCCTTGCTGAAG : GATTAATTGTGAATGATGCTTTTCAAGTGGCTGCAATTATTGAAAAGTTACCTCCATTGTGGAAGGACTTTAAAAACTACTTGAAACACAAACGCAAGGAGATGACTGTTGAAGATCTCATAGTAAGGTTGAGAATCGAAGAGGATAATAAGGCTGCAGAAAAGAGGTCACGTGGTAATTCAGCAATATCTGGAGTAAATTTTGTTGAAGAAGATTCCACAAAATTAAAGAAAAGA</gDNA_template>
            <first_frame> R  H  V  P  C  *  K  W  L  *  N  E  V  K  F  L  I  F  *  S  L  K  I  F  S  F  S  A  F  I  F  L  S  K  K  K  S  K  C  R  S  T  E  S  V  *  L  V  A  V  L  Q  F  V  E  V  K  E  V  *  G  T  A  I  S  L  I  G  L  I  R  F  I  L  G  E  I  N  P  *  P  W  V  Q  *  G  D  *  I  S  *  G  H  T  V  V  S  V  D  S  D  *  F  F  Y  F  K  F  F  L  L  H  L  V  S  V  S  V  H  *  L  H  K  Y  K  L  L  *  E  *  Q  S  *  E  I  *  *  F  L  Y  L  R  F  L  E  I  K  T  F  M  V  F  Y  S  A  *  I  F  K  I  H  S  I  N  D  *  K  N  I  K  T  L  S  L  N  Q  K  Q  F  V  *  R  F  V  L  Y  C  *  Y  F  K  Y  L  I  Y  L  P  F  V  T  E  K  K  *  L  I  Q  V  K  Q  M  L  E  Q  *  V  L  Q  Q  Q  R  L  H  I  I  V  Q  M  L  P  *  H  R  L  R  N  L  Q  S  F  L  E  S  T  L  R  D  G  S  K  R  C  S  S  I  S  L  R  *  V  C  R  S  S  S  M  R  M  F  L  L  C  Q  M  K  L  R  L  M  N  D  S  W  *  Q  K  H  G  H  I  H  I  F  C  V  K  I  I  F  *  V  V  C  K  M  I  C  T  M  C  T  T  M  Q  K  P  Q  K  N  S  G  M  L  *  K  R  S  T  K  Q  K  M  P  E  *  R  N  S  L  W  Q  N  F  W  T  L  R  *  *  T  V  R  L  S  S  P  K  F  K  N  *  R  S  *  F  M  I  S  L  L  K  :  D  *  L  *  M  M  L  F  K  W  L  Q  L  L  K  S  Y  L  H  C  G  R  T  L  K  T  T  *  N  T  N  A  R  R  *  L  L  K  I  S  *  *  G  *  E  S  K  R  I  I  R  L  Q  K  R  G  H  V  V  I  Q  Q  Y  L  E  *  I  L  L  K  K  I  P  Q  N  *  R  K   </first_frame>
            <second_frame>  D  T  F  L  A  E  N  G  Y  K  M  K  S  N  F  *  F  F  N  H  *  K  F  F  L  S  L  H  L  F  F  S  Q  K  K  N  Q  S  V  D  R  L  S  L  C  D  L  L  L  F  F  S  S  L  K  L  K  K  F  E  V  P  L  F  L  *  *  V  *  S  V  L  S  W  E  K  L  I  H  N  L  G  Y  S  E  G  I  K  F  L  K  D  T  Q  *  F  L  W  T  R  I  N  S  S  I  L  N  F  F  C  F  I  L  F  L  F  L  F  I  N  F  I  N  T  S  Y  C  K  N  N  N  L  K  K  F  N  S  F  C  I  *  G  F  W  R  L  K  P  L  W  F  S  T  L  L  E  F  L  K  F  I  R  L  T  I  K  R  T  *  K  L  Y  R  *  I  R  N  S  L  C  K  D  L  F  F  T  V  S  I  L  N  T  *  F  I  C  H  L  *  Q  K  K  N  D  *  F  K  S  N  K  C  W  N  S  K  C  C  N  N  N  G  C  T  *  S  F  K  C  C  L  S  T  G  *  E  T  C  K  V  F  W  S  R  L  *  E  M  A  A  K  D  V  L  L  S  H  Y  V  E  S  A  E  V  H  Q  *  E  C  S  C  Y  V  R  *  N  S  G  *  *  T  I  L  G  N  R  S  M  D  T  F  T  F  F  V  *  K  L  Y  F  E  W  S  A  R  *  F  V  Q  C  V  Q  Q  C  K  N  L  K  R  T  L  G  C  F  R  K  E  V  Q  N  R  R  C  R  N  E  E  I  H  C  G  K  I  S  G  L  *  D  D  R  Q  *  D  C  R  H  P  S  S  R  I  E  G  H  N  S  *  S  P  C  *  R :   I  N  C  E  *  C  F  S  S  G  C  N  Y  *  K  V  T  S  I  V  E  G  L  *  K  L  L  E  T  Q  T  Q  G  D  D  C  *  R  S  H  S  K  V  E  N  R  R  G  *  *  G  C  R  K  E  V  T  W  *  F  S  N  I  W  S  K  F  C  *  R  R  F  H  K  I  K  E  K  </second_frame>
            <third_frame>   T  R  S  L  L  K  M  A  I  K  *  S  Q  I  F  D  F  L  I  T  E  N  F  F  F  L  C  I  Y  F  S  L  K  K  K  I  K  V  S  I  D  *  V  C  V  T  C  C  C  S  S  V  R  *  S  *  R  S  L  R  Y  R  Y  F  F  N  R  F  N  P  F  Y  L  G  R  N  *  S  I  T  L  G  T  V  R  G  L  N  F  L  R  T  H  S  S  F  C  G  L  G  L  I  L  L  F  *  I  F  S  A  S  S  C  F  C  F  C  S  L  T  S  *  I  Q  V  I  V  R  I  T  I  L  R  N  L  I  V  S  V  F  K  V  S  G  D  *  N  L  Y  G  F  L  L  C  L  N  F  *  N  S  F  D  *  R  L  K  E  H  K  N  F  I  V  K  S  E  T  V  C  V  K  I  C  S  L  L  L  V  F  *  I  L  N  L  S  A  I  C  D  R  K  K  M  T  N  S  S  Q  T  N  A  G  T  V  S  A  A  T  T  T  V  A  H  N  R  S  N  A  A  L  A  P  A  E  K  P  A  K  F  S  G  V  D  F  K  R  W  Q  Q  K  M  F  F  Y  L  T  T  L  S  L  Q  K  F  I  N  E  N  V  P  V  M  S  D  E  T  P  A  D  E  R  F  L  V  T  E  A  W  T  H  S  H  F  L  C  K  N  Y  I  L  S  G  L  Q  D  D  L  Y  N  V  Y  N  N  A  K  T  S  K  E  L  W  D  A  L  E  K  K  Y  K  T  E  D  A  G  M  K  K  F  I  V  A  K  F  L  D  F  K  M  I  D  S  K  T  V  V  T  Q  V  Q  E  L  K  V  I  I  H  D  L  L  A  E   : G  L  I  V  N  D  A  F  Q  V  A  A  I  I  E  K  L  P  P  L  W  K  D  F  K  N  Y  L  K  H  K  R  K  E  M  T  V  E  D  L  I  V  R  L  R  I  E  E  D  N  K  A  A  E  K  R  S  R  G  N  S  A  I  S  G  V  N  F  V  E  E  D  S  T  K  L  K  K  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45398" stop="45938"/>
                    <exon start="46011" stop="46246"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>777</number_coding_nucleotides>
                  <number_encoded_amino_acids>259</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILNLSAICDRKKMTNSSQTNAGTVSAATTTVAHNRSNAALAPAEKPAKFSGVDFKRWQQKMFFYLTTLSLQKFINENVPVMSDETPADERFLVTEAWTHSHFLCKNYILSGLQDDLYNVYNNAKTSKELWDALEKKYKTEDAGMKKFIVAKFLDFKMIDSKTVVTQVQELKVIIHDLLAEGLIVNDAFQVAAIIEKLPPLWKDFKNYLKHKRKEMTVEDLIVRLRIEEDNKAAEKRSRGNSAISGVNFVEEDSTKLKKR</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="44808" e_stop="45006"/>
            <exon e_start="45427" e_stop="45994"/>
            <exon e_start="46234" e_stop="46251"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.774" acc_prob="0.966" e_score="0.889"/>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.912"/>
          <exon-only e_score="0.722"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.889">
            <gDNA_exon_boundary e_start="44808" e_stop="45006" e_length="199"/>
          </exon>
          <intron i_serial="1" don_prob="0.774" acc_prob="0.966">
            <gDNA_intron_boundary i_start="45007" i_stop="45426" i_length="420"/>
          </intron>
          <exon e_serial="2" e_score="0.912">
            <gDNA_exon_boundary e_start="45427" e_stop="45994" e_length="568"/>
          </exon>
          <intron i_serial="2" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="45995" i_stop="46233" i_length="239"/>
          </intron>
          <exon e_serial="3" e_score="0.722">
            <gDNA_exon_boundary e_start="46234" e_stop="46251" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44808" stop="45006"/>
              <exon start="45427" stop="45994"/>
              <exon start="46234" stop="46251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542858" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACAGATTTCACTGAACAGACACGTTCCTTGCTGAAAATGGCTATAAAATGAAGTCAAATTTTTGATTTTTTAATCACTGAAAATTTTTTCTTTCTCTGCATTTATTTTTCTCTCAAAAAAAAAATCAAAGTGTCGATCGACTGAGTCTGTGTGACTTGTTGCTGTTCTTCAGTTCGTTGAAGTTAAAGAAGTTTGAG : AAAAAAAATGACTAATTCAAGTCAAACAAATGCTGGAACAGTAAGTGCTGCAACAACAACGGTTGCACATAATCGTTCAAATGCTGCCTTAGCACCGGCTGAGAAACCTGCAAAGTTTTCTGGAGTCGACTTTAAGAGATGGCAGCAAAAGATGTTCTTCTATCTCACTACGTTGAGTCTGCAGAAGTTCATCAATGAGAATGTTCCTGTTATGTCAGATGAAACTCCGGCTGATGAACGATTCTTGGTAACAGAAGCATGGACACATTCACATTTTTTGTGTAAAAATTATATTTTGAGTGGTCTGCAAGATGATTTGTACAATGTGTACAACAATGCAAAAACCTCAAAAGAACTCTGGGATGCTTTAGAAAAGAAGTACAAAACAGAAGATGCCGGAATGAAGAAATTCATTGTGGCAAAATTTCTGGACTTTAAGATGATAGACAGTAAGACTGTCGTCACCCAAGTTCAAGAATTGAAGGTCATAATTCATGATCTCCTTGCTGAAGGTATAAATTTATTTAATGCCTATGTTAGAAATATTAAGTTTTCCCTTAATACTCAC : ATTAAAGAAAAGAAAGAA</gDNA_template>
            <first_frame> E  Q  I  S  L  N  R  H  V  P  C  *  K  W  L  *  N  E  V  K  F  L  I  F  *  S  L  K  I  F  S  F  S  A  F  I  F  L  S  K  K  K  S  K  C  R  S  T  E  S  V  *  L  V  A  V  L  Q  F  V  E  V  K  E  V  *   : E  K  K  *  L  I  Q  V  K  Q  M  L  E  Q  *  V  L  Q  Q  Q  R  L  H  I  I  V  Q  M  L  P  *  H  R  L  R  N  L  Q  S  F  L  E  S  T  L  R  D  G  S  K  R  C  S  S  I  S  L  R  *  V  C  R  S  S  S  M  R  M  F  L  L  C  Q  M  K  L  R  L  M  N  D  S  W  *  Q  K  H  G  H  I  H  I  F  C  V  K  I  I  F  *  V  V  C  K  M  I  C  T  M  C  T  T  M  Q  K  P  Q  K  N  S  G  M  L  *  K  R  S  T  K  Q  K  M  P  E  *  R  N  S  L  W  Q  N  F  W  T  L  R  *  *  T  V  R  L  S  S  P  K  F  K  N  *  R  S  *  F  M  I  S  L  L  K  V  *  I  Y  L  M  P  M  L  E  I  L  S  F  P  L  I  L  T :   L  K  K  R  K   </first_frame>
            <second_frame>  N  R  F  H  *  T  D  T  F  L  A  E  N  G  Y  K  M  K  S  N  F  *  F  F  N  H  *  K  F  F  L  S  L  H  L  F  F  S  Q  K  K  N  Q  S  V  D  R  L  S  L  C  D  L  L  L  F  F  S  S  L  K  L  K  K  F  E  :  K  K  N  D  *  F  K  S  N  K  C  W  N  S  K  C  C  N  N  N  G  C  T  *  S  F  K  C  C  L  S  T  G  *  E  T  C  K  V  F  W  S  R  L  *  E  M  A  A  K  D  V  L  L  S  H  Y  V  E  S  A  E  V  H  Q  *  E  C  S  C  Y  V  R  *  N  S  G  *  *  T  I  L  G  N  R  S  M  D  T  F  T  F  F  V  *  K  L  Y  F  E  W  S  A  R  *  F  V  Q  C  V  Q  Q  C  K  N  L  K  R  T  L  G  C  F  R  K  E  V  Q  N  R  R  C  R  N  E  E  I  H  C  G  K  I  S  G  L  *  D  D  R  Q  *  D  C  R  H  P  S  S  R  I  E  G  H  N  S  *  S  P  C  *  R  Y  K  F  I  *  C  L  C  *  K  Y  *  V  F  P  *  Y  S   : H  *  R  K  E  R  </second_frame>
            <third_frame>   T  D  F  T  E  Q  T  R  S  L  L  K  M  A  I  K  *  S  Q  I  F  D  F  L  I  T  E  N  F  F  F  L  C  I  Y  F  S  L  K  K  K  I  K  V  S  I  D  *  V  C  V  T  C  C  C  S  S  V  R  *  S  *  R  S  L  R :   K  K  M  T  N  S  S  Q  T  N  A  G  T  V  S  A  A  T  T  T  V  A  H  N  R  S  N  A  A  L  A  P  A  E  K  P  A  K  F  S  G  V  D  F  K  R  W  Q  Q  K  M  F  F  Y  L  T  T  L  S  L  Q  K  F  I  N  E  N  V  P  V  M  S  D  E  T  P  A  D  E  R  F  L  V  T  E  A  W  T  H  S  H  F  L  C  K  N  Y  I  L  S  G  L  Q  D  D  L  Y  N  V  Y  N  N  A  K  T  S  K  E  L  W  D  A  L  E  K  K  Y  K  T  E  D  A  G  M  K  K  F  I  V  A  K  F  L  D  F  K  M  I  D  S  K  T  V  V  T  Q  V  Q  E  L  K  V  I  I  H  D  L  L  A  E  G  I  N  L  F  N  A  Y  V  R  N  I  K  F  S  L  N  T  H  :  I  K  E  K  K  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="44996" stop="45006"/>
                    <exon start="45427" stop="45994"/>
                    <exon start="46234" stop="46251"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>597</number_coding_nucleotides>
                  <number_encoded_amino_acids>199</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSLRKKMTNSSQTNAGTVSAATTTVAHNRSNAALAPAEKPAKFSGVDFKRWQQKMFFYLTTLSLQKFINENVPVMSDETPADERFLVTEAWTHSHFLCKNYILSGLQDDLYNVYNNAKTSKELWDALEKKYKTEDAGMKKFIVAKFLDFKMIDSKTVVTQVQELKVIIHDLLAEGINLFNAYVRNIKFSLNTHIKEKKE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="46842" PGL_stop="46134"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46842" e_stop="46134"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="46842" e_stop="46134" e_length="709"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46842" stop="46134"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E369759" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAAGAAGAAGCAAAATCTTTATTCATATCAACTGCTATTACATTGAGTTTGAAAAGGTCATCACTAAAGTAGCCTTTTCCTACATACATATCATTTTTGCTTACTACTACTTTATCAGAAACAAATACACATTTAAATCCATTCTTGGTCAGAACTGGAATTGAAACTAAATTTTTTCTACATTCTGGAACATATGAGACCCTATTCAAAGTCACCACCTTGCCTGATGTCATCTTTAATAGGACTTTGCCAGTTCCTTCCACCTTTGCAACAGCGGAGTTTGCCATAAACAATTTTTCATCTGTAAGTGCTAGAGTATATGATGAAAATAATTCTTTGTTGGCACAAACATGGCATGAGGCACCAGAATCTATCCACCATTCTCTTGGATTTCCAACCAAGTTACATTCTGAAAGCATTGCACAGAGATCGTCCATTTCTCCTTTGGATTCAGCCAAGTTTGTTTGATCCTTCTTTTTCTTGTTCTTCTTAGGACCCCGGCATTTATTAGCCCTATGACCATGTTTACCACAATTAAAGCAGTTTCCATTGAATTTCTTCTTAGGAGGATTGCTTTTTGGACCAGATGCTTTCTTTCTTTTCTTTAATTTTGTGGAATCTTCTTCAACAAAATTTACTCCAGATATTGCTGAATTACCACGTGACCTCTTTTCTGCAGCCTTATTATCCTCTTCGATTCTCAACCTTA</gDNA_template>
            <first_frame> *  E  E  A  K  S  L  F  I  S  T  A  I  T  L  S  L  K  R  S  S  L  K  *  P  F  P  T  Y  I  S  F  L  L  T  T  T  L  S  E  T  N  T  H  L  N  P  F  L  V  R  T  G  I  E  T  K  F  F  L  H  S  G  T  Y  E  T  L  F  K  V  T  T  L  P  D  V  I  F  N  R  T  L  P  V  P  S  T  F  A  T  A  E  F  A  I  N  N  F  S  S  V  S  A  R  V  Y  D  E  N  N  S  L  L  A  Q  T  W  H  E  A  P  E  S  I  H  H  S  L  G  F  P  T  K  L  H  S  E  S  I  A  Q  R  S  S  I  S  P  L  D  S  A  K  F  V  *  S  F  F  F  L  F  F  L  G  P  R  H  L  L  A  L  *  P  C  L  P  Q  L  K  Q  F  P  L  N  F  F  L  G  G  L  L  F  G  P  D  A  F  F  L  F  F  N  F  V  E  S  S  S  T  K  F  T  P  D  I  A  E  L  P  R  D  L  F  S  A  A  L  L  S  S  S  I  L  N  L  </first_frame>
            <second_frame>  K  K  K  Q  N  L  Y  S  Y  Q  L  L  L  H  *  V  *  K  G  H  H  *  S  S  L  F  L  H  T  Y  H  F  C  L  L  L  L  Y  Q  K  Q  I  H  I  *  I  H  S  W  S  E  L  E  L  K  L  N  F  F  Y  I  L  E  H  M  R  P  Y  S  K  S  P  P  C  L  M  S  S  L  I  G  L  C  Q  F  L  P  P  L  Q  Q  R  S  L  P  *  T  I  F  H  L  *  V  L  E  Y  M  M  K  I  I  L  C  W  H  K  H  G  M  R  H  Q  N  L  S  T  I  L  L  D  F  Q  P  S  Y  I  L  K  A  L  H  R  D  R  P  F  L  L  W  I  Q  P  S  L  F  D  P  S  F  S  C  S  S  *  D  P  G  I  Y  *  P  Y  D  H  V  Y  H  N  *  S  S  F  H  *  I  S  S  *  E  D  C  F  L  D  Q  M  L  S  F  F  S  L  I  L  W  N  L  L  Q  Q  N  L  L  Q  I  L  L  N  Y  H  V  T  S  F  L  Q  P  Y  Y  P  L  R  F  S  T  L </second_frame>
            <third_frame>   R  R  S  K  I  F  I  H  I  N  C  Y  Y  I  E  F  E  K  V  I  T  K  V  A  F  S  Y  I  H  I  I  F  A  Y  Y  Y  F  I  R  N  K  Y  T  F  K  S  I  L  G  Q  N  W  N  *  N  *  I  F  S  T  F  W  N  I  *  D  P  I  Q  S  H  H  L  A  *  C  H  L  *  *  D  F  A  S  S  F  H  L  C  N  S  G  V  C  H  K  Q  F  F  I  C  K  C  *  S  I  *  *  K  *  F  F  V  G  T  N  M  A  *  G  T  R  I  Y  P  P  F  S  W  I  S  N  Q  V  T  F  *  K  H  C  T  E  I  V  H  F  S  F  G  F  S  Q  V  C  L  I  L  L  F  L  V  L  L  R  T  P  A  F  I  S  P  M  T  M  F  T  T  I  K  A  V  S  I  E  F  L  L  R  R  I  A  F  W  T  R  C  F  L  S  F  L  *  F  C  G  I  F  F  N  K  I  Y  S  R  Y  C  *  I  T  T  *  P  L  F  C  S  L  I  I  L  F  D  S  Q  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46770" stop="46375"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>393</number_coding_nucleotides>
                  <number_encoded_amino_acids>131</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PFPTYISFLLTTTLSETNTHLNPFLVRTGIETKFFLHSGTYETLFKVTTLPDVIFNRTLPVPSTFATAEFAINNFSSVSARVYDENNSLLAQTWHEAPESIHHSLGFPTKLHSESIAQRSSISPLDSAKFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="46283" PGL_stop="47172"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46283" e_stop="46845"/>
            <exon e_start="47149" e_stop="47172"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.947" e_score="0.966"/>
          <exon-only e_score="0.529"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="46283" e_stop="46845" e_length="563"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.947">
            <gDNA_intron_boundary i_start="46846" i_stop="47148" i_length="303"/>
          </intron>
          <exon e_serial="2" e_score="0.529">
            <gDNA_exon_boundary e_start="47149" e_stop="47172" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46283" stop="46845"/>
              <exon start="47149" stop="47170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395006" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46307" stop="46845"/>
              <exon start="47149" stop="47172"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E250407" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46339" stop="46845"/>
              <exon start="47149" stop="47165"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375520" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGAAATTCAATGGAAACTGCTTTAATTGTGGTAAACATGGTCATAGGGCTAATAAATGCCGGGGTCCTAAGAAGAACAAGAAAAAGAAGGATCAAACAAACTTGGCTGAATCCAAAGGAGAAATGGACGATCTCTGTGCAATGCTTTCAGAATGTAACTTGGTTGGAAATCCAAGAGAATGGTGGATAGATTCTGGTGCCTCATGCCATGTTTGTGCCAACAAAGAATTATTTTCATCATATACTCTAGCACTTACAGATGAAAAATTGTTTATGGCAAACTCCGCTGTTGCAAAGGTGGAAGGAACTGGCAAAGTCCTATTAAAGATGACATCAGGCAAGGTGGTGACTTTGAATAGGGTCTCATATGTTCCAGAATGTAGAAAAAATTTAGTTTCAATTCCAGTTCTGACCAAGAATGGATTTAAATGTGTATTTGTTTCTGATAAAGTAGTAGTAAGCAAAAATGATATGTATGTAGGAAAAGGCTACTTTAGTGATGACCTTTTCAAACTCAATGTAATAGCAGTTGATATGAATAAAGATTTTGCTTCTTCTTACTA : TAAGGATGAAACAATAGATGCATT</gDNA_template>
            <first_frame> K  K  F  N  G  N  C  F  N  C  G  K  H  G  H  R  A  N  K  C  R  G  P  K  K  N  K  K  K  K  D  Q  T  N  L  A  E  S  K  G  E  M  D  D  L  C  A  M  L  S  E  C  N  L  V  G  N  P  R  E  W  W  I  D  S  G  A  S  C  H  V  C  A  N  K  E  L  F  S  S  Y  T  L  A  L  T  D  E  K  L  F  M  A  N  S  A  V  A  K  V  E  G  T  G  K  V  L  L  K  M  T  S  G  K  V  V  T  L  N  R  V  S  Y  V  P  E  C  R  K  N  L  V  S  I  P  V  L  T  K  N  G  F  K  C  V  F  V  S  D  K  V  V  V  S  K  N  D  M  Y  V  G  K  G  Y  F  S  D  D  L  F  K  L  N  V  I  A  V  D  M  N  K  D  F  A  S  S  Y  Y :   K  D  E  T  I  D  A   </first_frame>
            <second_frame>  R  N  S  M  E  T  A  L  I  V  V  N  M  V  I  G  L  I  N  A  G  V  L  R  R  T  R  K  R  R  I  K  Q  T  W  L  N  P  K  E  K  W  T  I  S  V  Q  C  F  Q  N  V  T  W  L  E  I  Q  E  N  G  G  *  I  L  V  P  H  A  M  F  V  P  T  K  N  Y  F  H  H  I  L  *  H  L  Q  M  K  N  C  L  W  Q  T  P  L  L  Q  R  W  K  E  L  A  K  S  Y  *  R  *  H  Q  A  R  W  *  L  *  I  G  S  H  M  F  Q  N  V  E  K  I  *  F  Q  F  Q  F  *  P  R  M  D  L  N  V  Y  L  F  L  I  K  *  *  *  A  K  M  I  C  M  *  E  K  A  T  L  V  M  T  F  S  N  S  M  *  *  Q  L  I  *  I  K  I  L  L  L  L  T   : I  R  M  K  Q  *  M  H  </second_frame>
            <third_frame>   E  I  Q  W  K  L  L  *  L  W  *  T  W  S  *  G  *  *  M  P  G  S  *  E  E  Q  E  K  E  G  S  N  K  L  G  *  I  Q  R  R  N  G  R  S  L  C  N  A  F  R  M  *  L  G  W  K  S  K  R  M  V  D  R  F  W  C  L  M  P  C  L  C  Q  Q  R  I  I  F  I  I  Y  S  S  T  Y  R  *  K  I  V  Y  G  K  L  R  C  C  K  G  G  R  N  W  Q  S  P  I  K  D  D  I  R  Q  G  G  D  F  E  *  G  L  I  C  S  R  M  *  K  K  F  S  F  N  S  S  S  D  Q  E  W  I  *  M  C  I  C  F  *  *  S  S  S  K  Q  K  *  Y  V  C  R  K  R  L  L  *  *  *  P  F  Q  T  Q  C  N  S  S  *  Y  E  *  R  F  C  F  F  L  L  :  *  G  *  N  N  R  C  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46283" stop="46845"/>
                    <exon start="47149" stop="47170"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>585</number_coding_nucleotides>
                  <number_encoded_amino_acids>195</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKFNGNCFNCGKHGHRANKCRGPKKNKKKKDQTNLAESKGEMDDLCAMLSECNLVGNPREWWIDSGASCHVCANKELFSSYTLALTDEKLFMANSAVAKVEGTGKVLLKMTSGKVVTLNRVSYVPECRKNLVSIPVLTKNGFKCVFVSDKVVVSKNDMYVGKGYFSDDLFKLNVIAVDMNKDFASSYYKDETIDA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="54819" PGL_stop="55592"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54819" e_stop="55592"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="54819" e_stop="55592" e_length="774"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54819" stop="55592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548702" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54819" stop="55425"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542373" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54820" stop="55373"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298268" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTACTTTCACACAGAGCTTTTTCCTTGTACCAAAATTGGAAAATCTCAAATTGGGTGCCAATGATCTTCTCAAAGGAGTTTTACCAAAGATCCACCCGAGCAACACTACTCTATTGGAGTTGGATATTTCTAACACAGGAATCTCTGGTGAGCTGACTGATTCAATTGGCACCTTCAGTTCCTTGAATATCTTGAACCTCAAAGGATGTCGATTCTCTGGTTCCATTCCTGATTCCATTGGCAATCTTACACAAATTAGGTATTTGGATTTCAGTTATAATCATTTCACCGGCCATATTCCTTCCACAATCTCTCAATTGAAGCACCTCACATATCTAAGTCTTTCATCCAACTCCTTTTCAGGTGAACTTCCCGATATTTTTTCTAACCTCCAAGAGTTACGTTATTTATATCTTTCTAACAACAGCTTCATCGGTTCGTTTCCTTCTAAAATTGTAAGCTTGACACATCTTGAATGCTTAGACTTGTCCTACAACTTAATGAATGGGACCATACCATCTTCGGTGTTTAGCCTCCCTTTGTTAGGTCTGTTGTGGCTCAATAATAATCGATTTAGTGGACTACCCGATGAGCTCAAAACAAACCCAACATTGGTACGCCTGTTTTTAAGCCATAATCAACTCAGTTGTTCTTTTCCTCAATCACTTTCGAATCTCACAAACCTTTCTATCCTTGACCTTTCATCGAATAGCATCACTGTCGATGAGGGAAATCAAATCACTTTCCCTAACCTAAAAGTTTTGATGTTATCAT</gDNA_template>
            <first_frame> V  L  S  H  R  A  F  S  L  Y  Q  N  W  K  I  S  N  W  V  P  M  I  F  S  K  E  F  Y  Q  R  S  T  R  A  T  L  L  Y  W  S  W  I  F  L  T  Q  E  S  L  V  S  *  L  I  Q  L  A  P  S  V  P  *  I  S  *  T  S  K  D  V  D  S  L  V  P  F  L  I  P  L  A  I  L  H  K  L  G  I  W  I  S  V  I  I  I  S  P  A  I  F  L  P  Q  S  L  N  *  S  T  S  H  I  *  V  F  H  P  T  P  F  Q  V  N  F  P  I  F  F  L  T  S  K  S  Y  V  I  Y  I  F  L  T  T  A  S  S  V  R  F  L  L  K  L  *  A  *  H  I  L  N  A  *  T  C  P  T  T  *  *  M  G  P  Y  H  L  R  C  L  A  S  L  C  *  V  C  C  G  S  I  I  I  D  L  V  D  Y  P  M  S  S  K  Q  T  Q  H  W  Y  A  C  F  *  A  I  I  N  S  V  V  L  F  L  N  H  F  R  I  S  Q  T  F  L  S  L  T  F  H  R  I  A  S  L  S  M  R  E  I  K  S  L  S  L  T  *  K  F  *  C  Y  H </first_frame>
            <second_frame>  Y  F  H  T  E  L  F  P  C  T  K  I  G  K  S  Q  I  G  C  Q  *  S  S  Q  R  S  F  T  K  D  P  P  E  Q  H  Y  S  I  G  V  G  Y  F  *  H  R  N  L  W  *  A  D  *  F  N  W  H  L  Q  F  L  E  Y  L  E  P  Q  R  M  S  I  L  W  F  H  S  *  F  H  W  Q  S  Y  T  N  *  V  F  G  F  Q  L  *  S  F  H  R  P  Y  S  F  H  N  L  S  I  E  A  P  H  I  S  K  S  F  I  Q  L  L  F  R  *  T  S  R  Y  F  F  *  P  P  R  V  T  L  F  I  S  F  *  Q  Q  L  H  R  F  V  S  F  *  N  C  K  L  D  T  S  *  M  L  R  L  V  L  Q  L  N  E  W  D  H  T  I  F  G  V  *  P  P  F  V  R  S  V  V  A  Q  *  *  S  I  *  W  T  T  R  *  A  Q  N  K  P  N  I  G  T  P  V  F  K  P  *  S  T  Q  L  F  F  S  S  I  T  F  E  S  H  K  P  F  Y  P  *  P  F  I  E  *  H  H  C  R  *  G  K  S  N  H  F  P  *  P  K  S  F  D  V  I   </second_frame>
            <third_frame>   T  F  T  Q  S  F  F  L  V  P  K  L  E  N  L  K  L  G  A  N  D  L  L  K  G  V  L  P  K  I  H  P  S  N  T  T  L  L  E  L  D  I  S  N  T  G  I  S  G  E  L  T  D  S  I  G  T  F  S  S  L  N  I  L  N  L  K  G  C  R  F  S  G  S  I  P  D  S  I  G  N  L  T  Q  I  R  Y  L  D  F  S  Y  N  H  F  T  G  H  I  P  S  T  I  S  Q  L  K  H  L  T  Y  L  S  L  S  S  N  S  F  S  G  E  L  P  D  I  F  S  N  L  Q  E  L  R  Y  L  Y  L  S  N  N  S  F  I  G  S  F  P  S  K  I  V  S  L  T  H  L  E  C  L  D  L  S  Y  N  L  M  N  G  T  I  P  S  S  V  F  S  L  P  L  L  G  L  L  W  L  N  N  N  R  F  S  G  L  P  D  E  L  K  T  N  P  T  L  V  R  L  F  L  S  H  N  Q  L  S  C  S  F  P  Q  S  L  S  N  L  T  N  L  S  I  L  D  L  S  S  N  S  I  T  V  D  E  G  N  Q  I  T  F  P  N  L  K  V  L  M  L  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54821" stop="55591"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>771</number_coding_nucleotides>
                  <number_encoded_amino_acids>257</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TFTQSFFLVPKLENLKLGANDLLKGVLPKIHPSNTTLLELDISNTGISGELTDSIGTFSSLNILNLKGCRFSGSIPDSIGNLTQIRYLDFSYNHFTGHIPSTISQLKHLTYLSLSSNSFSGELPDIFSNLQELRYLYLSNNSFIGSFPSKIVSLTHLECLDLSYNLMNGTIPSSVFSLPLLGLLWLNNNRFSGLPDELKTNPTLVRLFLSHNQLSCSFPQSLSNLTNLSILDLSSNSITVDEGNQITFPNLKVLMLS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="55620" PGL_stop="56120"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="55620" e_stop="56120"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.904"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.904">
            <gDNA_exon_boundary e_start="55620" e_stop="56120" e_length="501"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="55620" stop="56120"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E607222" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTGACAAATGTAAAGAAACTTCAGGCCTTGGATATTTCTAACAATAAGATTGGTGGCCAAATCCCAAACTGGTTTAGCGGCATAAGGTGGGACAACTTGTACTACCTAAATCTTTCGCATAATTCTTTAACAGGCCACCTACCAAAATTTCATTTCCATAATATAGGGTATCTTGATCTTAAATTTAACTTCCTTCAGGGTCCACTACCTTCATCAGTTTGTAACATGAACTATCTTCAATCTCTACATTTATCACACAACAACTTCAGTAACTCGATTCCAAGTTGCTTGGGAAGCATGTCTAGTCTAAAAGTGTTGGACTTAAGAAGGAACAATTTCACAGGAAGTCTTCCCCCATTATGTGCGCAGAACACTTCATTGAGAACCATTGTCTTGAATGGTAATCAATTTGAAGGAACTCTCCCTTTCTCGTTGCTCAACTGTAGTAATTTAGAAGTTGTTGATATACGGAATAACGCTATAAATGACACATTTCCTG</gDNA_template>
            <first_frame> S  *  Q  M  *  R  N  F  R  P  W  I  F  L  T  I  R  L  V  A  K  S  Q  T  G  L  A  A  *  G  G  T  T  C  T  T  *  I  F  R  I  I  L  *  Q  A  T  Y  Q  N  F  I  S  I  I  *  G  I  L  I  L  N  L  T  S  F  R  V  H  Y  L  H  Q  F  V  T  *  T  I  F  N  L  Y  I  Y  H  T  T  T  S  V  T  R  F  Q  V  A  W  E  A  C  L  V  *  K  C  W  T  *  E  G  T  I  S  Q  E  V  F  P  H  Y  V  R  R  T  L  H  *  E  P  L  S  *  M  V  I  N  L  K  E  L  S  L  S  R  C  S  T  V  V  I  *  K  L  L  I  Y  G  I  T  L  *  M  T  H  F  L </first_frame>
            <second_frame>  L  D  K  C  K  E  T  S  G  L  G  Y  F  *  Q  *  D  W  W  P  N  P  K  L  V  *  R  H  K  V  G  Q  L  V  L  P  K  S  F  A  *  F  F  N  R  P  P  T  K  I  S  F  P  *  Y  R  V  S  *  S  *  I  *  L  P  S  G  S  T  T  F  I  S  L  *  H  E  L  S  S  I  S  T  F  I  T  Q  Q  L  Q  *  L  D  S  K  L  L  G  K  H  V  *  S  K  S  V  G  L  K  K  E  Q  F  H  R  K  S  S  P  I  M  C  A  E  H  F  I  E  N  H  C  L  E  W  *  S  I  *  R  N  S  P  F  L  V  A  Q  L  *  *  F  R  S  C  *  Y  T  E  *  R  Y  K  *  H  I  S   </second_frame>
            <third_frame>   L  T  N  V  K  K  L  Q  A  L  D  I  S  N  N  K  I  G  G  Q  I  P  N  W  F  S  G  I  R  W  D  N  L  Y  Y  L  N  L  S  H  N  S  L  T  G  H  L  P  K  F  H  F  H  N  I  G  Y  L  D  L  K  F  N  F  L  Q  G  P  L  P  S  S  V  C  N  M  N  Y  L  Q  S  L  H  L  S  H  N  N  F  S  N  S  I  P  S  C  L  G  S  M  S  S  L  K  V  L  D  L  R  R  N  N  F  T  G  S  L  P  P  L  C  A  Q  N  T  S  L  R  T  I  V  L  N  G  N  Q  F  E  G  T  L  P  F  S  L  L  N  C  S  N  L  E  V  V  D  I  R  N  N  A  I  N  D  T  F  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="55622" stop="56119"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>498</number_coding_nucleotides>
                  <number_encoded_amino_acids>166</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LTNVKKLQALDISNNKIGGQIPNWFSGIRWDNLYYLNLSHNSLTGHLPKFHFHNIGYLDLKFNFLQGPLPSSVCNMNYLQSLHLSHNNFSNSIPSCLGSMSSLKVLDLRRNNFTGSLPPLCAQNTSLRTIVLNGNQFEGTLPFSLLNCSNLEVVDIRNNAINDTFP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="56348" PGL_stop="57146"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56348" e_stop="57146"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="56348" e_stop="57146" e_length="799"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56348" stop="57146"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542364" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCATTGTACAGATCGTATGAGGATTCTGTGAGTTTGGTGATCAAAGGCCAGGACATTGAGCTAGAAAGAATCAGCACAATTATGACAACCATAGACCTCTCGAGCAACCATTTTGAAGGTGTCATTCCAAAAACACTAAAGGATCTCAGCTCACTTTGGCTACTCAATTTATCCCATAACAATCTCATCGGTCATATTCCAATGGAATTGGGGCAATTGAATAAGCTTGAAGCGTTATATCTCTCCTGGAATCGGCTCACAGGAAAGATTCCAAGGGAATTGATAACAATGAAGTTTCTAGCAGTCTTAAACCTCTCTCAGAATCTTCTTATTGGATCGATTCCTCAAGGTCTACAATTCAACACATTTGAAAATGACTCGTATGGCGGTAACCTTGATCTATGTGGTCCTCCTTTGTCAAAGCAATGTGGAACGAGTGATTCATCCCATGTTCCTCAACCATTGGAGTCTGAAGACGAGTCATATTTTTTTAGTGGATTTACGTGGGAATCAGTAGTCATAGGCTACAGCTTTGGACTAGTTGTTGGAACTGTTGTGTGGAGCCTCGTGTTTAAATACCGTAAGCCAGAATGGTTTGTCGAATTTTTTGAAGGCATTTATCCCAAGAAAATGAGAAGGTCAATGAAGAGAGCTCGGAGACGACGGACTTAATGGAAGAATGTAAGAGTGAACTTTTCTGTTTTTTAGTTATATTTTTGTTGTTTGTATATATGCTTGATAACAATTAATTGCATGTGTTATATTGTGAATTTCCACTGAATTAAAATAAGTGTTCTTG</gDNA_template>
            <first_frame> S  L  Y  R  S  Y  E  D  S  V  S  L  V  I  K  G  Q  D  I  E  L  E  R  I  S  T  I  M  T  T  I  D  L  S  S  N  H  F  E  G  V  I  P  K  T  L  K  D  L  S  S  L  W  L  L  N  L  S  H  N  N  L  I  G  H  I  P  M  E  L  G  Q  L  N  K  L  E  A  L  Y  L  S  W  N  R  L  T  G  K  I  P  R  E  L  I  T  M  K  F  L  A  V  L  N  L  S  Q  N  L  L  I  G  S  I  P  Q  G  L  Q  F  N  T  F  E  N  D  S  Y  G  G  N  L  D  L  C  G  P  P  L  S  K  Q  C  G  T  S  D  S  S  H  V  P  Q  P  L  E  S  E  D  E  S  Y  F  F  S  G  F  T  W  E  S  V  V  I  G  Y  S  F  G  L  V  V  G  T  V  V  W  S  L  V  F  K  Y  R  K  P  E  W  F  V  E  F  F  E  G  I  Y  P  K  K  M  R  R  S  M  K  R  A  R  R  R  R  T  *  W  K  N  V  R  V  N  F  S  V  F  *  L  Y  F  C  C  L  Y  I  C  L  I  T  I  N  C  M  C  Y  I  V  N  F  H  *  I  K  I  S  V  L  </first_frame>
            <second_frame>  H  C  T  D  R  M  R  I  L  *  V  W  *  S  K  A  R  T  L  S  *  K  E  S  A  Q  L  *  Q  P  *  T  S  R  A  T  I  L  K  V  S  F  Q  K  H  *  R  I  S  A  H  F  G  Y  S  I  Y  P  I  T  I  S  S  V  I  F  Q  W  N  W  G  N  *  I  S  L  K  R  Y  I  S  P  G  I  G  S  Q  E  R  F  Q  G  N  *  *  Q  *  S  F  *  Q  S  *  T  S  L  R  I  F  L  L  D  R  F  L  K  V  Y  N  S  T  H  L  K  M  T  R  M  A  V  T  L  I  Y  V  V  L  L  C  Q  S  N  V  E  R  V  I  H  P  M  F  L  N  H  W  S  L  K  T  S  H  I  F  L  V  D  L  R  G  N  Q  *  S  *  A  T  A  L  D  *  L  L  E  L  L  C  G  A  S  C  L  N  T  V  S  Q  N  G  L  S  N  F  L  K  A  F  I  P  R  K  *  E  G  Q  *  R  E  L  G  D  D  G  L  N  G  R  M  *  E  *  T  F  L  F  F  S  Y  I  F  V  V  C  I  Y  A  *  *  Q  L  I  A  C  V  I  L  *  I  S  T  E  L  K  *  V  F  L </second_frame>
            <third_frame>   I  V  Q  I  V  *  G  F  C  E  F  G  D  Q  R  P  G  H  *  A  R  K  N  Q  H  N  Y  D  N  H  R  P  L  E  Q  P  F  *  R  C  H  S  K  N  T  K  G  S  Q  L  T  L  A  T  Q  F  I  P  *  Q  S  H  R  S  Y  S  N  G  I  G  A  I  E  *  A  *  S  V  I  S  L  L  E  S  A  H  R  K  D  S  K  G  I  D  N  N  E  V  S  S  S  L  K  P  L  S  E  S  S  Y  W  I  D  S  S  R  S  T  I  Q  H  I  *  K  *  L  V  W  R  *  P  *  S  M  W  S  S  F  V  K  A  M  W  N  E  *  F  I  P  C  S  S  T  I  G  V  *  R  R  V  I  F  F  *  W  I  Y  V  G  I  S  S  H  R  L  Q  L  W  T  S  C  W  N  C  C  V  E  P  R  V  *  I  P  *  A  R  M  V  C  R  I  F  *  R  H  L  S  Q  E  N  E  K  V  N  E  E  S  S  E  T  T  D  L  M  E  E  C  K  S  E  L  F  C  F  L  V  I  F  L  L  F  V  Y  M  L  D  N  N  *  L  H  V  L  Y  C  E  F  P  L  N  *  N  K  C  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56348" stop="57019"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>669</number_coding_nucleotides>
                  <number_encoded_amino_acids>223</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLYRSYEDSVSLVIKGQDIELERISTIMTTIDLSSNHFEGVIPKTLKDLSSLWLLNLSHNNLIGHIPMELGQLNKLEALYLSWNRLTGKIPRELITMKFLAVLNLSQNLLIGSIPQGLQFNTFENDSYGGNLDLCGPPLSKQCGTSDSSHVPQPLESEDESYFFSGFTWESVVIGYSFGLVVGTVVWSLVFKYRKPEWFVEFFEGIYPKKMRRSMKRARRRRT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="57139" PGL_stop="56565"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57139" e_stop="56565"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="57139" e_stop="56565" e_length="575"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57139" stop="56565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E542371" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTTATTTTAATTCAGTGGAAATTCACAATATAACACATGCAATTAATTGTTATCAAGCATATATACAAACAACAAAAATATAACTAAAAAACAGAAAAGTTCACTCTTACATTCTTCCATTAAGTCCGTCGTCTCCGAGCTCTCTTCATTGACCTTCTCATTTTCTTGGGATAAATGCCTTCAAAAAATTCGACAAACCATTCTGGCTTACGGTATTTAAACACGAGGCTCCACACAACAGTTCCAACAACTAGTCCAAAGCTGTAGCCTATGACTACTGATTCCCACGTAAATCCACTAAAAAAATATGACTCGTCTTCAGACTCCAATGGTTGAGGAACATGGGATGAATCACTCGTTCCACATTGCTTTGACAAAGGAGGACCACATAGATCAAGGTTACCGCCATACGAGTCATTTTCAAATGTGTTGAATTGTAGACCTTGAGGAATCGATCCAATAAGAAGATTCTGAGAGAGGTTTAAGACTGCTAGAAACTTCATTGTTATCAATTCCCTTGGAATCTTTCCTGTGAGCCGATTCCAGGAGAGATATAACGCTTCAAGCTTATTCA</gDNA_template>
            <first_frame> T  Y  F  N  S  V  E  I  H  N  I  T  H  A  I  N  C  Y  Q  A  Y  I  Q  T  T  K  I  *  L  K  N  R  K  V  H  S  Y  I  L  P  L  S  P  S  S  P  S  S  L  H  *  P  S  H  F  L  G  I  N  A  F  K  K  F  D  K  P  F  W  L  T  V  F  K  H  E  A  P  H  N  S  S  N  N  *  S  K  A  V  A  Y  D  Y  *  F  P  R  K  S  T  K  K  I  *  L  V  F  R  L  Q  W  L  R  N  M  G  *  I  T  R  S  T  L  L  *  Q  R  R  T  T  *  I  K  V  T  A  I  R  V  I  F  K  C  V  E  L  *  T  L  R  N  R  S  N  K  K  I  L  R  E  V  *  D  C  *  K  L  H  C  Y  Q  F  P  W  N  L  S  C  E  P  I  P  G  E  I  *  R  F  K  L  I   </first_frame>
            <second_frame>  L  I  L  I  Q  W  K  F  T  I  *  H  M  Q  L  I  V  I  K  H  I  Y  K  Q  Q  K  Y  N  *  K  T  E  K  F  T  L  T  F  F  H  *  V  R  R  L  R  A  L  F  I  D  L  L  I  F  L  G  *  M  P  S  K  N  S  T  N  H  S  G  L  R  Y  L  N  T  R  L  H  T  T  V  P  T  T  S  P  K  L  *  P  M  T  T  D  S  H  V  N  P  L  K  K  Y  D  S  S  S  D  S  N  G  *  G  T  W  D  E  S  L  V  P  H  C  F  D  K  G  G  P  H  R  S  R  L  P  P  Y  E  S  F  S  N  V  L  N  C  R  P  *  G  I  D  P  I  R  R  F  *  E  R  F  K  T  A  R  N  F  I  V  I  N  S  L  G  I  F  P  V  S  R  F  Q  E  R  Y  N  A  S  S  L  F  </second_frame>
            <third_frame>   L  F  *  F  S  G  N  S  Q  Y  N  T  C  N  *  L  L  S  S  I  Y  T  N  N  K  N  I  T  K  K  Q  K  S  S  L  L  H  S  S  I  K  S  V  V  S  E  L  S  S  L  T  F  S  F  S  W  D  K  C  L  Q  K  I  R  Q  T  I  L  A  Y  G  I  *  T  R  G  S  T  Q  Q  F  Q  Q  L  V  Q  S  C  S  L  *  L  L  I  P  T  *  I  H  *  K  N  M  T  R  L  Q  T  P  M  V  E  E  H  G  M  N  H  S  F  H  I  A  L  T  K  E  D  H  I  D  Q  G  Y  R  H  T  S  H  F  Q  M  C  *  I  V  D  L  E  E  S  I  Q  *  E  D  S  E  R  G  L  R  L  L  E  T  S  L  L  S  I  P  L  E  S  F  L  *  A  D  S  R  R  D  I  T  L  Q  A  Y  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0161H10.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="57972" PGL_stop="57189"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57972" e_stop="57770"/>
            <exon e_start="57687" e_stop="57189"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.950" e_score="0.931"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="57972" e_stop="57770" e_length="203"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.950">
            <gDNA_intron_boundary i_start="57769" i_stop="57688" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="57687" e_stop="57189" e_length="499"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57972" stop="57770"/>
              <exon start="57687" stop="57388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266957" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57928" stop="57770"/>
              <exon start="57687" stop="57480"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E265650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57834" stop="57770"/>
              <exon start="57687" stop="57189"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266711" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTGGGTTCAAGAAATGGCGAGATTTGTGAAGTCATTATACAACAAACACTTGTTGGAAGTTGGAATGGAAGGATTTTATGGTGATTCAATTCCTAAAAGAAAATTAGTTAATCCTGGTTATCAAGTTGGAACAGATTTCATTAGTAACCATTTTATCAATGAAATTGATTTTGCTACAATCCATGCATACACTGATCAATG : ATTATCTGGACAAAGTGATGAAGCACAATTGGTGTGGATGGAAAAGTGGATAAGAAGTCATTGGGAAGATGCAAGAAATATATTGAAGAAACCTTTAGTGCTTGCTGAATTTGGAAAGTCTAGTAGATCAGGTGAAGGATCAAGAGATATATTTATGAGTAGTGTGTACAGAAATGTGTATAATTTGGCAAAAGAAGGTGGAACAATGGGAGGAAGTTTAGTATGGCAACTAATGGCACATGGAATGGAGAATTATGATGATGGTTATTCTATTGTTTTGGGACTAAATCCTTCAACTACACAAATTATCTCAAACCAAGCTCATATCATGACTGCTTTGGCTCATTCTCTCAATTCATGAGTGAAGACATCATAATAATCAATTTATAATCTATCATTTTTAGTATTATTAATTTGAGATGATATTACCAAACATGTTCAAGTTGATTAAACACAAGAATGTAATTGAATAAATTGTTTTAGTAAAAAGGAAAGTTAT</gDNA_template>
            <first_frame> G  W  V  Q  E  M  A  R  F  V  K  S  L  Y  N  K  H  L  L  E  V  G  M  E  G  F  Y  G  D  S  I  P  K  R  K  L  V  N  P  G  Y  Q  V  G  T  D  F  I  S  N  H  F  I  N  E  I  D  F  A  T  I  H  A  Y  T  D  Q  * :   L  S  G  Q  S  D  E  A  Q  L  V  W  M  E  K  W  I  R  S  H  W  E  D  A  R  N  I  L  K  K  P  L  V  L  A  E  F  G  K  S  S  R  S  G  E  G  S  R  D  I  F  M  S  S  V  Y  R  N  V  Y  N  L  A  K  E  G  G  T  M  G  G  S  L  V  W  Q  L  M  A  H  G  M  E  N  Y  D  D  G  Y  S  I  V  L  G  L  N  P  S  T  T  Q  I  I  S  N  Q  A  H  I  M  T  A  L  A  H  S  L  N  S  *  V  K  T  S  *  *  S  I  Y  N  L  S  F  L  V  L  L  I  *  D  D  I  T  K  H  V  Q  V  D  *  T  Q  E  C  N  *  I  N  C  F  S  K  K  E  S  Y </first_frame>
            <second_frame>  V  G  F  K  K  W  R  D  L  *  S  H  Y  T  T  N  T  C  W  K  L  E  W  K  D  F  M  V  I  Q  F  L  K  E  N  *  L  I  L  V  I  K  L  E  Q  I  S  L  V  T  I  L  S  M  K  L  I  L  L  Q  S  M  H  T  L  I  N   : D  Y  L  D  K  V  M  K  H  N  W  C  G  W  K  S  G  *  E  V  I  G  K  M  Q  E  I  Y  *  R  N  L  *  C  L  L  N  L  E  S  L  V  D  Q  V  K  D  Q  E  I  Y  L  *  V  V  C  T  E  M  C  I  I  W  Q  K  K  V  E  Q  W  E  E  V  *  Y  G  N  *  W  H  M  E  W  R  I  M  M  M  V  I  L  L  F  W  D  *  I  L  Q  L  H  K  L  S  Q  T  K  L  I  S  *  L  L  W  L  I  L  S  I  H  E  *  R  H  H  N  N  Q  F  I  I  Y  H  F  *  Y  Y  *  F  E  M  I  L  P  N  M  F  K  L  I  K  H  K  N  V  I  E  *  I  V  L  V  K  R  K  V   </second_frame>
            <third_frame>   L  G  S  R  N  G  E  I  C  E  V  I  I  Q  Q  T  L  V  G  S  W  N  G  R  I  L  W  *  F  N  S  *  K  K  I  S  *  S  W  L  S  S  W  N  R  F  H  *  *  P  F  Y  Q  *  N  *  F  C  Y  N  P  C  I  H  *  S  M  :  I  I  W  T  K  *  *  S  T  I  G  V  D  G  K  V  D  K  K  S  L  G  R  C  K  K  Y  I  E  E  T  F  S  A  C  *  I  W  K  V  *  *  I  R  *  R  I  K  R  Y  I  Y  E  *  C  V  Q  K  C  V  *  F  G  K  R  R  W  N  N  G  R  K  F  S  M  A  T  N  G  T  W  N  G  E  L  *  *  W  L  F  Y  C  F  G  T  K  S  F  N  Y  T  N  Y  L  K  P  S  S  Y  H  D  C  F  G  S  F  S  Q  F  M  S  E  D  I  I  I  I  N  L  *  S  I  I  F  S  I  I  N  L  R  *  Y  Y  Q  T  C  S  S  *  L  N  T  R  M  *  L  N  K  L  F  *  *  K  G  K  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57686" stop="57327"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LSGQSDEAQLVWMEKWIRSHWEDARNILKKPLVLAEFGKSSRSGEGSRDIFMSSVYRNVYNLAKEGGTMGGSLVWQLMAHGMENYDDGYSIVLGLNPSTTQIISNQAHIMTALAHSLNS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57972" stop="57687"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GWVQEMARFVKSLYNKHLLEVGMEGFYGDSIPKRKLVNPGYQVGTDFISNHFINEIDFATIHAYTDQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="70153" PGL_stop="69638"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70153" e_stop="70069"/>
            <exon e_start="69989" e_stop="69638"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.622" acc_prob="0.941" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="70153" e_stop="70069" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.622" acc_prob="0.941">
            <gDNA_intron_boundary i_start="70068" i_stop="69990" i_length="79"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="69989" e_stop="69638" e_length="352"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70153" stop="70069"/>
              <exon start="69989" stop="69638"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E293627" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGGCGAGTCGTTGCTTCTGTTTTGGAAAACCTTTGAGCCCCGGTGGTTCAAGGGGCTGTGCTGTTCTGTTATTCGTCATGTGTTG : GGTTACATTTTTCATCGCGGAGGTGTGTTTGTTGGCTGGTTCAGTTAGGAACGCGTATCATACCAAGTATAGATCATCGCTCTTGTTTAATGATCGACCTGTATCTTGTGAGACTGTGAGAAAAGGCGTTTTTGCTGCTGGAGCCGCGTTTATTTTCTTCACTAGCATAATCAATAAGTTTTACTTTATCAGTTACTCCAACGCTAAGAGTGGAGCTGGACCATATGGTGGAGAAGCTGGTGTGGGAATGGCAGCCTACAAATGAATATGATCAATCATGAAGTTCTATATGTATAATAATTTTTCAGTTTTTAGTTGTACTTGACTTCATAATTTGGTACTTTTTTTTTTT</gDNA_template>
            <first_frame> W  R  V  V  A  S  V  L  E  N  L  *  A  P  V  V  Q  G  A  V  L  F  C  Y  S  S  C  V   : G  L  H  F  S  S  R  R  C  V  C  W  L  V  Q  L  G  T  R  I  I  P  S  I  D  H  R  S  C  L  M  I  D  L  Y  L  V  R  L  *  E  K  A  F  L  L  L  E  P  R  L  F  S  S  L  A  *  S  I  S  F  T  L  S  V  T  P  T  L  R  V  E  L  D  H  M  V  E  K  L  V  W  E  W  Q  P  T  N  E  Y  D  Q  S  *  S  S  I  C  I  I  I  F  Q  F  L  V  V  L  D  F  I  I  W  Y  F  F  F   </first_frame>
            <second_frame>  G  E  S  L  L  L  F  W  K  T  F  E  P  R  W  F  K  G  L  C  C  S  V  I  R  H  V  L  :  G  Y  I  F  H  R  G  G  V  F  V  G  W  F  S  *  E  R  V  S  Y  Q  V  *  I  I  A  L  V  *  *  S  T  C  I  L  *  D  C  E  K  R  R  F  C  C  W  S  R  V  Y  F  L  H  *  H  N  Q  *  V  L  L  Y  Q  L  L  Q  R  *  E  W  S  W  T  I  W  W  R  S  W  C  G  N  G  S  L  Q  M  N  M  I  N  H  E  V  L  Y  V  *  *  F  F  S  F  *  L  Y  L  T  S  *  F  G  T  F  F  F  </second_frame>
            <third_frame>   A  S  R  C  F  C  F  G  K  P  L  S  P  G  G  S  R  G  C  A  V  L  L  F  V  M  C  W :   V  T  F  F  I  A  E  V  C  L  L  A  G  S  V  R  N  A  Y  H  T  K  Y  R  S  S  L  L  F  N  D  R  P  V  S  C  E  T  V  R  K  G  V  F  A  A  G  A  A  F  I  F  F  T  S  I  I  N  K  F  Y  F  I  S  Y  S  N  A  K  S  G  A  G  P  Y  G  G  E  A  G  V  G  M  A  A  Y  K  *  I  *  S  I  M  K  F  Y  M  Y  N  N  F  S  V  F  S  C  T  *  L  H  N  L  V  L  F  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70151" stop="70069"/>
                    <exon start="69989" stop="69725"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>345</number_coding_nucleotides>
                  <number_encoded_amino_acids>115</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASRCFCFGKPLSPGGSRGCAVLLFVMCWVTFFIAEVCLLAGSVRNAYHTKYRSSLLFNDRPVSCETVRKGVFAAGAAFIFFTSIINKFYFISYSNAKSGAGPYGGEAGVGMAAYK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="76356" PGL_stop="79542"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="76356" e_stop="76606"/>
            <exon e_start="77403" e_stop="77674"/>
            <exon e_start="78456" e_stop="79542"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.941" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="76356" e_stop="76606" e_length="251"/>
          </exon>
          <intron i_serial="1" don_prob="0.941" acc_prob="0.998">
            <gDNA_intron_boundary i_start="76607" i_stop="77402" i_length="796"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="77403" e_stop="77674" e_length="272"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.974">
            <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781"/>
          </intron>
          <exon e_serial="3" e_score="0.989">
            <gDNA_exon_boundary e_start="78456" e_stop="79542" e_length="1087"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76356" stop="76606"/>
              <exon start="77403" stop="77525"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E290024" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76357" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78500"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207528" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76359" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213412" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76360" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78738"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211505" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76370" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76390" stop="76606"/>
              <exon start="77403" stop="77568"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76391" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E246511" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76391" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78475"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76398" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78794"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433908" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76398" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78591"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404440" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76399" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="79542"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E747662" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76401" stop="76606"/>
              <exon start="77403" stop="77674"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251664" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76402" stop="76606"/>
              <exon start="77403" stop="77629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375266" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76412" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78695"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E610694" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76441" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78623"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249782" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76471" stop="76606"/>
              <exon start="77403" stop="77665"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E458542" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76499" stop="76606"/>
              <exon start="77403" stop="77674"/>
              <exon start="78456" stop="78563"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E729019" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77565" stop="77674"/>
              <exon start="78456" stop="78848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78689" stop="79295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78689" stop="79253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78689" stop="79154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78769" stop="79508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78926" stop="79472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298565" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATTTTGAAAAAAAATAATATTTTTTTTATGAAAAAAAAAGAAGTTTTTTATTAATTAAAAAAAAAATTATGGGTGTTCAAGAAAAAGATCCACTTTTGCAATTAAGTTTACCACCAGGATTTAGATTTTATCCAACTGATGAAGAGCTTTTAGTTCAATATTTATGTAAGAAAGTTGCTGGACATGATTTTCCTCTACAAATTATTGGTGAAATTGATTTATACAAATTTGATCCTTGGGTTTTACCTA : GTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG : CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATTTTTACATTTCTGTGTAGCAAGTTAGAAGATATATAGAAAGATACTTTTAAAATACTTTTTATAATTTGTCATTTTAATTAA</gDNA_template>
            <first_frame> K  F  *  K  K  I  I  F  F  L  *  K  K  K  K  F  F  I  N  *  K  K  N  Y  G  C  S  R  K  R  S  T  F  A  I  K  F  T  T  R  I  *  I  L  S  N  *  *  R  A  F  S  S  I  F  M  *  E  S  C  W  T  *  F  S  S  T  N  Y  W  *  N  *  F  I  Q  I  *  S  L  G  F  T  * :   *  G  D  I  W  *  K  R  M  V  F  L  Q  S  E  G  *  E  V  S  E  W  I  *  T  E  S  S  S  R  F  G  L  L  E  S  N  G  D  G  *  G  D  N  F  A  R  K  K  S  W  N  *  E  S  S  C  V  L  C  G  *  S  S  K  R  I  Q  D  E  L  D  Y  A  *  I  *  T  F  *  I  F  K  E  K  *  W  K  F  K   : A  R  *  M  G  A  L  S  N  L  *  E  E  F  K  W  T  K  T  S  D  V  W  F  T  Q  Q  *  *  I  Q  P  W  F  V  D  F  V  I  I  P  I  R  *  Y  A  R  I  I  T  R  N  G  R  S  I  L  Q  F  T  E  V  E  L  S  Q  G  R  E  I  Q  P  R  S  S  G  F  S  Q  F  R  L  G  N  S  R  W  A  Q  T  N  A  G  I  G  P  S  K  S  S  S  R  R  S  G  S  G  S  G  A  C  Q  *  P  H  S  Q  R  Q  Q  Q  Y  E  F  S  Q  R  C  L  R  P  S  S  K  F  P  R  Q  H  K  G  *  K  Y  *  S  R  R  R  S  *  K  R  E  K  K  S  T  D  *  P  I  E  L  L  P  T  E  S  Q  W  I  F  P  S  V  Y  K  Q  C  G  S  I  R  D  P  M  S  E  S  D  V  K  S  R  V  Q  A  V  E  D  T  G  K  *  E  K  L  *  L  E  I  *  M  P  V  Y  C  V  Y  I  Q  K  A  W  I  *  I  S  L  A  Q  R  I  R  R  K  S  K  Y  S  I  M  P  R  K  L  S  P  S  R  A  R  L  G  R  R  R  G  R  Y  L  Q  V  L  A  I  V  S  E  V  I  R  L  S  G  T  S  Y  L  Q  V  V  F  E  V  I  R  P  K  A  R  L  R  G  R  *  N  N  V  H  K  Q  E  I  Y  A  G  A  C  I  F  F  *  E  T  G  L  L  V  C  F  I  L  *  Y  I  S  R  F  G  C  I  L  *  F  L  H  F  C  V  A  S  *  K  I  Y  R  K  I  L  L  K  Y  F  L  *  F  V  I  L  I   </first_frame>
            <second_frame>  N  F  E  K  K  *  Y  F  F  Y  E  K  K  R  S  F  L  L  I  K  K  K  I  M  G  V  Q  E  K  D  P  L  L  Q  L  S  L  P  P  G  F  R  F  Y  P  T  D  E  E  L  L  V  Q  Y  L  C  K  K  V  A  G  H  D  F  P  L  Q  I  I  G  E  I  D  L  Y  K  F  D  P  W  V  L  P   : S  K  A  T  F  G  E  K  E  W  Y  F  F  S  P  R  D  R  K  Y  P  N  G  S  R  P  N  R  V  A  G  S  G  Y  W  K  A  T  G  T  D  K  V  I  T  S  Q  G  R  K  V  G  I  K  K  A  L  V  F  Y  V  G  K  A  P  K  G  S  K  T  N  W  I  M  H  E  Y  R  L  F  E  S  S  R  K  N  N  G  S  S  K  :  L  D  E  W  V  L  C  R  I  Y  K  K  N  S  S  G  P  K  P  L  M  S  G  L  H  S  S  N  E  Y  S  H  G  S  S  T  S  S  S  S  Q  F  D  D  M  L  E  S  L  P  E  M  D  D  R  F  S  N  L  P  R  L  N  S  L  K  A  E  K  F  N  L  D  R  L  D  S  A  N  F  D  W  A  I  L  A  G  L  K  P  M  P  E  L  G  P  A  N  Q  A  P  G  V  Q  G  Q  A  Q  G  H  V  N  N  H  I  H  S  D  N  N  N  M  N  F  L  N  D  V  Y  A  H  P  P  N  F  R  G  N  T  K  V  E  S  I  N  L  D  E  E  V  E  S  G  K  R  N  Q  R  I  D  Q  S  S  Y  F  Q  Q  S  L  N  G  F  S  Q  A  Y  T  N  N  V  D  Q  F  G  I  Q  C  P  N  Q  T  L  N  L  G  F  K  Q  *  R  I  L  E  S  K  K  S  C  S  S  K  S  E  C  Q  Y  T  V  Y  I  Y  R  R  P  G  F  R  F  P  W  P  N  G  F  E  E  R  A  S  T  V  S  C  Q  G  N  *  V  L  R  G  H  V  W  A  D  V  V  D  V  I  C  K  F  L  Q  L  C  L  K  S  L  G  *  V  A  L  L  I  C  K  L  C  L  K  S  L  G  R  R  H  V  C  V  D  D  K  I  M  Y  T  N  R  R  Y  M  Q  G  R  V  Y  S  F  R  K  L  G  F  *  F  V  L  F  Y  D  T  F  P  D  L  D  V  F  C  N  F  Y  I  S  V  *  Q  V  R  R  Y  I  E  R  Y  F  *  N  T  F  Y  N  L  S  F  *  L  </second_frame>
            <third_frame>   I  L  K  K  N  N  I  F  F  M  K  K  K  E  V  F  Y  *  L  K  K  K  L  W  V  F  K  K  K  I  H  F  C  N  *  V  Y  H  Q  D  L  D  F  I  Q  L  M  K  S  F  *  F  N  I  Y  V  R  K  L  L  D  M  I  F  L  Y  K  L  L  V  K  L  I  Y  T  N  L  I  L  G  F  Y  L  :  V  R  R  H  L  V  K  K  N  G  I  S  S  V  R  G  I  G  S  I  R  M  D  L  D  R  I  E  *  Q  V  R  V  I  G  K  Q  R  G  R  I  R  *  *  L  R  K  E  E  K  L  E  L  R  K  L  L  C  F  M  W  V  K  L  Q  K  D  P  R  R  I  G  L  C  M  N  I  D  F  L  N  L  Q  G  K  I  M  E  V  Q  S :   *  M  N  G  C  F  V  E  F  I  R  R  I  Q  V  D  Q  N  L  *  C  L  V  Y  T  A  V  M  N  T  A  M  V  R  R  L  R  H  H  P  N  S  M  I  C  S  N  H  Y  Q  K  W  T  I  D  S  P  I  Y  R  G  *  T  L  S  R  P  R  N  S  T  S  I  V  W  I  Q  P  I  S  I  G  Q  F  S  L  G  S  N  Q  C  R  N  W  A  Q  Q  I  K  L  Q  A  F  R  V  R  L  R  G  M  S  I  T  T  F  T  A  T  T  T  I  *  I  F  S  T  M  F  T  P  I  L  Q  I  S  E  A  T  Q  R  L  K  V  L  I  *  T  K  K  L  K  A  G  K  E  I  N  G  L  T  N  R  V  T  S  N  R  V  S  M  D  F  P  K  R  I  Q  T  M  W  I  N  S  G  S  N  V  R  I  R  R  *  I  S  G  S  S  S  R  G  Y  W  K  V  R  K  V  V  A  R  N  L  N  A  S  I  L  C  I  Y  T  E  G  L  D  L  D  F  L  G  P  T  D  S  K  K  E  Q  V  Q  Y  H  A  K  E  I  K  S  F  E  G  T  S  G  Q  T  S  W  T  L  F  A  S  S  C  N  C  V  *  S  H  *  A  E  W  H  F  L  F  A  S  C  V  *  S  H  *  A  E  G  T  S  A  W  T  I  K  *  C  T  Q  T  G  D  I  C  R  G  V  Y  I  L  L  G  N  W  A  F  S  L  F  Y  F  M  I  H  F  Q  I  W  M  Y  F  V  I  F  T  F  L  C  S  K  L  E  D  I  *  K  D  T  F  K  I  L  F  I  I  C  H  F  N  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="76375" stop="76606"/>
                    <exon start="77403" stop="77674"/>
                    <exon start="78456" stop="79052"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1098</number_coding_nucleotides>
                  <number_encoded_amino_acids>366</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YFFYEKKRSFLLIKKKIMGVQEKDPLLQLSLPPGFRFYPTDEELLVQYLCKKVAGHDFPLQIIGEIDLYKFDPWVLPSKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITSQGRKVGIKKALVFYVGKAPKGSKTNWIMHEYRLFESSRKNNGSSKLDEWVLCRIYKKNSSGPKPLMSGLHSSNEYSHGSSTSSSSQFDDMLESLPEMDDRFSNLPRLNSLKAEKFNLDRLDSANFDWAILAGLKPMPELGPANQAPGVQGQAQGHVNNHIHSDNNNMNFLNDVYAHPPNFRGNTKVESINLDEEVESGKRNQRIDQSSYFQQSLNGFSQAYTNNVDQFGIQCPNQTLNLGFKQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79033" stop="79263"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISGSSSRGYWKVRKVVARNLNASILCIYTEGLDLDFLGPTDSKKEQVQYHAKEIKSFEGTSGQTSWTLFASSCNCV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="77400" e_stop="77674"/>
            <exon e_start="78456" e_stop="79508"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.974" e_score="0.982"/>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="77400" e_stop="77674" e_length="275"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.974">
            <gDNA_intron_boundary i_start="77675" i_stop="78455" i_length="781"/>
          </intron>
          <exon e_serial="2" e_score="0.999">
            <gDNA_exon_boundary e_start="78456" e_stop="79508" e_length="1053"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77400" stop="77674"/>
              <exon start="78456" stop="78952"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698798" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77565" stop="77674"/>
              <exon start="78456" stop="78848"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202202" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78689" stop="79295"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E238332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78689" stop="79253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243464" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78689" stop="79154"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E239663" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78769" stop="79508"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716630" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="78926" stop="79472"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298565" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGTAAGGCGACATTTGGTGAAAAAGAATGGTATTTCTTCAGTCCGAGGGATAGGAAGTATCCGAATGGATCTAGACCGAATCGAGTAGCAGGTTCGGGTTATTGGAAAGCAACGGGGACGGATAAGGTGATAACTTCGCAAGGAAGAAAAGTTGGAATTAAGAAAGCTCTTGTGTTTTATGTGGGTAAAGCTCCAAAAGGATCCAAGACGAATTGGATTATGCATGAATATAGACTTTTTGAATCTTCAAGGAAAAATAATGGAAGTTCAAAG : CTAGATGAATGGGTGCTTTGTCGAATTTATAAGAAGAATTCAAGTGGACCAAAACCTCTGATGTCTGGTTTACACAGCAGTAATGAATACAGCCATGGTTCGTCGACTTCGTCATCATCCCAATTCGATGATATGCTCGAATCATTACCAGAAATGGACGATCGATTCTCCAATTTACCGAGGTTGAACTCTCTCAAGGCCGAGAAATTCAACCTCGATCGTCTGGATTCAGCCAATTTCGATTGGGCAATTCTCGCTGGGCTCAAACCAATGCCGGAATTGGGCCCAGCAAATCAAGCTCCAGGCGTTCAGGGTCAGGCTCAGGGGCATGTCAATAACCACATTCACAGCGACAACAACAATATGAATTTTCTCAACGATGTTTACGCCCATCCTCCAAATTTCCGAGGCAACACAAAGGTTGAAAGTATTAATCTAGACGAAGAAGTTGAAAGCGGGAAAAGAAATCAACGGATTGACCAATCGAGTTACTTCCAACAGAGTCTCAATGGATTTTCCCAAGCGTATACAAACAATGTGGATCAATTCGGGATCCAATGTCCGAATCAGACGTTAAATCTCGGGTTCAAGCAGTAGAGGATACTGGAAAGTAAGAAAAGTTGTAGCTCGAAATCTGAATGCCAGTATACTGTGTATATATACAGAAGGCCTGGATTTAGATTTCCTTGGCCCAACGGATTCGAAGAAAGAGCAAGTACAGTATCATGCCAAGGAAATTAAGTCCTTCGAGGGCACGTCTGGGCAGACGTCGTGGACGTTATTTGCAAGTTCTTGCAATTGTGTCTGAAGTCATTAGGCTGAGTGGCACTTCTTATTTGCAAGTTGTGTTTGAAGTCATTAGGCCGAAGGCACGTCTGCGTGGACGATAAAATAATGTACACAAACAGGAGATATATGCAGGGGCGTGTATATTCTTTTAGGAAACTGGGCTTTTAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTATTTTGTAATTTTTACATTTCTGTGTAGCAAGTTAGAAGATATATAGAAAGATACTTT</gDNA_template>
            <first_frame> *  V  R  R  H  L  V  K  K  N  G  I  S  S  V  R  G  I  G  S  I  R  M  D  L  D  R  I  E  *  Q  V  R  V  I  G  K  Q  R  G  R  I  R  *  *  L  R  K  E  E  K  L  E  L  R  K  L  L  C  F  M  W  V  K  L  Q  K  D  P  R  R  I  G  L  C  M  N  I  D  F  L  N  L  Q  G  K  I  M  E  V  Q  S :   *  M  N  G  C  F  V  E  F  I  R  R  I  Q  V  D  Q  N  L  *  C  L  V  Y  T  A  V  M  N  T  A  M  V  R  R  L  R  H  H  P  N  S  M  I  C  S  N  H  Y  Q  K  W  T  I  D  S  P  I  Y  R  G  *  T  L  S  R  P  R  N  S  T  S  I  V  W  I  Q  P  I  S  I  G  Q  F  S  L  G  S  N  Q  C  R  N  W  A  Q  Q  I  K  L  Q  A  F  R  V  R  L  R  G  M  S  I  T  T  F  T  A  T  T  T  I  *  I  F  S  T  M  F  T  P  I  L  Q  I  S  E  A  T  Q  R  L  K  V  L  I  *  T  K  K  L  K  A  G  K  E  I  N  G  L  T  N  R  V  T  S  N  R  V  S  M  D  F  P  K  R  I  Q  T  M  W  I  N  S  G  S  N  V  R  I  R  R  *  I  S  G  S  S  S  R  G  Y  W  K  V  R  K  V  V  A  R  N  L  N  A  S  I  L  C  I  Y  T  E  G  L  D  L  D  F  L  G  P  T  D  S  K  K  E  Q  V  Q  Y  H  A  K  E  I  K  S  F  E  G  T  S  G  Q  T  S  W  T  L  F  A  S  S  C  N  C  V  *  S  H  *  A  E  W  H  F  L  F  A  S  C  V  *  S  H  *  A  E  G  T  S  A  W  T  I  K  *  C  T  Q  T  G  D  I  C  R  G  V  Y  I  L  L  G  N  W  A  F  S  L  F  Y  F  M  I  H  F  Q  I  W  M  Y  F  V  I  F  T  F  L  C  S  K  L  E  D  I  *  K  D  T   </first_frame>
            <second_frame>  R  *  G  D  I  W  *  K  R  M  V  F  L  Q  S  E  G  *  E  V  S  E  W  I  *  T  E  S  S  S  R  F  G  L  L  E  S  N  G  D  G  *  G  D  N  F  A  R  K  K  S  W  N  *  E  S  S  C  V  L  C  G  *  S  S  K  R  I  Q  D  E  L  D  Y  A  *  I  *  T  F  *  I  F  K  E  K  *  W  K  F  K   : A  R  *  M  G  A  L  S  N  L  *  E  E  F  K  W  T  K  T  S  D  V  W  F  T  Q  Q  *  *  I  Q  P  W  F  V  D  F  V  I  I  P  I  R  *  Y  A  R  I  I  T  R  N  G  R  S  I  L  Q  F  T  E  V  E  L  S  Q  G  R  E  I  Q  P  R  S  S  G  F  S  Q  F  R  L  G  N  S  R  W  A  Q  T  N  A  G  I  G  P  S  K  S  S  S  R  R  S  G  S  G  S  G  A  C  Q  *  P  H  S  Q  R  Q  Q  Q  Y  E  F  S  Q  R  C  L  R  P  S  S  K  F  P  R  Q  H  K  G  *  K  Y  *  S  R  R  R  S  *  K  R  E  K  K  S  T  D  *  P  I  E  L  L  P  T  E  S  Q  W  I  F  P  S  V  Y  K  Q  C  G  S  I  R  D  P  M  S  E  S  D  V  K  S  R  V  Q  A  V  E  D  T  G  K  *  E  K  L  *  L  E  I  *  M  P  V  Y  C  V  Y  I  Q  K  A  W  I  *  I  S  L  A  Q  R  I  R  R  K  S  K  Y  S  I  M  P  R  K  L  S  P  S  R  A  R  L  G  R  R  R  G  R  Y  L  Q  V  L  A  I  V  S  E  V  I  R  L  S  G  T  S  Y  L  Q  V  V  F  E  V  I  R  P  K  A  R  L  R  G  R  *  N  N  V  H  K  Q  E  I  Y  A  G  A  C  I  F  F  *  E  T  G  L  L  V  C  F  I  L  *  Y  I  S  R  F  G  C  I  L  *  F  L  H  F  C  V  A  S  *  K  I  Y  R  K  I  L  </second_frame>
            <third_frame>   G  K  A  T  F  G  E  K  E  W  Y  F  F  S  P  R  D  R  K  Y  P  N  G  S  R  P  N  R  V  A  G  S  G  Y  W  K  A  T  G  T  D  K  V  I  T  S  Q  G  R  K  V  G  I  K  K  A  L  V  F  Y  V  G  K  A  P  K  G  S  K  T  N  W  I  M  H  E  Y  R  L  F  E  S  S  R  K  N  N  G  S  S  K  :  L  D  E  W  V  L  C  R  I  Y  K  K  N  S  S  G  P  K  P  L  M  S  G  L  H  S  S  N  E  Y  S  H  G  S  S  T  S  S  S  S  Q  F  D  D  M  L  E  S  L  P  E  M  D  D  R  F  S  N  L  P  R  L  N  S  L  K  A  E  K  F  N  L  D  R  L  D  S  A  N  F  D  W  A  I  L  A  G  L  K  P  M  P  E  L  G  P  A  N  Q  A  P  G  V  Q  G  Q  A  Q  G  H  V  N  N  H  I  H  S  D  N  N  N  M  N  F  L  N  D  V  Y  A  H  P  P  N  F  R  G  N  T  K  V  E  S  I  N  L  D  E  E  V  E  S  G  K  R  N  Q  R  I  D  Q  S  S  Y  F  Q  Q  S  L  N  G  F  S  Q  A  Y  T  N  N  V  D  Q  F  G  I  Q  C  P  N  Q  T  L  N  L  G  F  K  Q  *  R  I  L  E  S  K  K  S  C  S  S  K  S  E  C  Q  Y  T  V  Y  I  Y  R  R  P  G  F  R  F  P  W  P  N  G  F  E  E  R  A  S  T  V  S  C  Q  G  N  *  V  L  R  G  H  V  W  A  D  V  V  D  V  I  C  K  F  L  Q  L  C  L  K  S  L  G  *  V  A  L  L  I  C  K  L  C  L  K  S  L  G  R  R  H  V  C  V  D  D  K  I  M  Y  T  N  R  R  Y  M  Q  G  R  V  Y  S  F  R  K  L  G  F  *  F  V  L  F  Y  D  T  F  P  D  L  D  V  F  C  N  F  Y  I  S  V  *  Q  V  R  R  Y  I  E  R  Y  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77402" stop="77674"/>
                    <exon start="78456" stop="79052"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>867</number_coding_nucleotides>
                  <number_encoded_amino_acids>289</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GKATFGEKEWYFFSPRDRKYPNGSRPNRVAGSGYWKATGTDKVITSQGRKVGIKKALVFYVGKAPKGSKTNWIMHEYRLFESSRKNNGSSKLDEWVLCRIYKKNSSGPKPLMSGLHSSNEYSHGSSTSSSSQFDDMLESLPEMDDRFSNLPRLNSLKAEKFNLDRLDSANFDWAILAGLKPMPELGPANQAPGVQGQAQGHVNNHIHSDNNNMNFLNDVYAHPPNFRGNTKVESINLDEEVESGKRNQRIDQSSYFQQSLNGFSQAYTNNVDQFGIQCPNQTLNLGFKQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79033" stop="79263"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>228</number_coding_nucleotides>
                  <number_encoded_amino_acids>76</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ISGSSSRGYWKVRKVVARNLNASILCIYTEGLDLDFLGPTDSKKEQVQYHAKEIKSFEGTSGQTSWTLFASSCNCV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="79524" PGL_stop="78854"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79524" e_stop="78854"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="79524" e_stop="78854" e_length="671"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79524" stop="79060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E394914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79524" stop="79167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E375265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79519" stop="78854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E249170" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATAAAAAGTATTTTAAAAGTATCTTTCTATATATCTTCTAACTTGCTACACAGAAATGTAAAAATTACAAAATACATCCAAATCTGGAAATGTATCATAAAATAAAACAAACTAAAAGCCCAGTTTCCTAAAAGAATATACACGCCCCTGCATATATCTCCTGTTTGTGTACATTATTTTATCGTCCACGCAGACGTGCCTTCGGCCTAATGACTTCAAACACAACTTGCAAATAAGAAGTGCCACTCAGCCTAATGACTTCAGACACAATTGCAAGAACTTGCAAATAACGTCCACGACGTCTGCCCAGACGTGCCCTCGAAGGACTTAATTTCCTTGGCATGATACTGTACTTGCTCTTTCTTCGAATCCGTTGGGCCAAGGAAATCTAAATCCAGGCCTTCTGTATATATACACAGTATACTGGCATTCAGATTTCGAGCTACAACTTTTCTTACTTTCCAGTATCCTCTACTGCTTGAACCCGAGATTTAACGTCTGATTCGGACATTGGATCCCGAATTGATCCACATTGTTTGTATACGCTTGGGAAAATCCATTGAGACTCTGTTGGAAGTAACTCGATTGGTCAATCCGTTGATTTCTTTTCCCGCTTTCAACTTCTTCGTCTAGATTAATACTTTCAACCTTTGTGTTGCCTCGGAAATTT</gDNA_template>
            <first_frame> Y  K  K  Y  F  K  S  I  F  L  Y  I  F  *  L  A  T  Q  K  C  K  N  Y  K  I  H  P  N  L  E  M  Y  H  K  I  K  Q  T  K  S  P  V  S  *  K  N  I  H  A  P  A  Y  I  S  C  L  C  T  L  F  Y  R  P  R  R  R  A  F  G  L  M  T  S  N  T  T  C  K  *  E  V  P  L  S  L  M  T  S  D  T  I  A  R  T  C  K  *  R  P  R  R  L  P  R  R  A  L  E  G  L  N  F  L  G  M  I  L  Y  L  L  F  L  R  I  R  W  A  K  E  I  *  I  Q  A  F  C  I  Y  T  Q  Y  T  G  I  Q  I  S  S  Y  N  F  S  Y  F  P  V  S  S  T  A  *  T  R  D  L  T  S  D  S  D  I  G  S  R  I  D  P  H  C  L  Y  T  L  G  K  I  H  *  D  S  V  G  S  N  S  I  G  Q  S  V  D  F  F  S  R  F  Q  L  L  R  L  D  *  Y  F  Q  P  L  C  C  L  G  N   </first_frame>
            <second_frame>  I  K  S  I  L  K  V  S  F  Y  I  S  S  N  L  L  H  R  N  V  K  I  T  K  Y  I  Q  I  W  K  C  I  I  K  *  N  K  L  K  A  Q  F  P  K  R  I  Y  T  P  L  H  I  S  P  V  C  V  H  Y  F  I  V  H  A  D  V  P  S  A  *  *  L  Q  T  Q  L  A  N  K  K  C  H  S  A  *  *  L  Q  T  Q  L  Q  E  L  A  N  N  V  H  D  V  C  P  D  V  P  S  K  D  L  I  S  L  A  *  Y  C  T  C  S  F  F  E  S  V  G  P  R  K  S  K  S  R  P  S  V  Y  I  H  S  I  L  A  F  R  F  R  A  T  T  F  L  T  F  Q  Y  P  L  L  L  E  P  E  I  *  R  L  I  R  T  L  D  P  E  L  I  H  I  V  C  I  R  L  G  K  S  I  E  T  L  L  E  V  T  R  L  V  N  P  L  I  S  F  P  A  F  N  F  F  V  *  I  N  T  F  N  L  C  V  A  S  E  I  </second_frame>
            <third_frame>   *  K  V  F  *  K  Y  L  S  I  Y  L  L  T  C  Y  T  E  M  *  K  L  Q  N  T  S  K  S  G  N  V  S  *  N  K  T  N  *  K  P  S  F  L  K  E  Y  T  R  P  C  I  Y  L  L  F  V  Y  I  I  L  S  S  T  Q  T  C  L  R  P  N  D  F  K  H  N  L  Q  I  R  S  A  T  Q  P  N  D  F  R  H  N  C  K  N  L  Q  I  T  S  T  T  S  A  Q  T  C  P  R  R  T  *  F  P  W  H  D  T  V  L  A  L  S  S  N  P  L  G  Q  G  N  L  N  P  G  L  L  Y  I  Y  T  V  Y  W  H  S  D  F  E  L  Q  L  F  L  L  S  S  I  L  Y  C  L  N  P  R  F  N  V  *  F  G  H  W  I  P  N  *  S  T  L  F  V  Y  A  W  E  N  P  L  R  L  C  W  K  *  L  D  W  S  I  R  *  F  L  F  P  L  S  T  S  S  S  R  L  I  L  S  T  F  V  L  P  R  K  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79408" stop="79193"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>213</number_coding_nucleotides>
                  <number_encoded_amino_acids>71</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KPSFLKEYTRPCIYLLFVYIILSSTQTCLRPNDFKHNLQIRSATQPNDFRHNCKNLQITSTTSAQTCPRRT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="+" PGL_start="83585" PGL_stop="84233"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="83585" e_stop="84233"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="83585" e_stop="84233" e_length="649"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83585" stop="84233"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539761" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83586" stop="83970"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E284788" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACGTCAGAAACTGGGAGTCTTGACAAACAGGTGGAGTTTCAAGTCATTCAGAACGAGAGCGATTTAAAGGAACCTGAAGAGGAGGATCAAGAGCCACAGACAGAAACTGATATTCCAGAATCTATGCCATCAGATATCCATCAGAGTATAGCTCAAGATCGGCCAAGGAGGGTTGGAGTTCGGCCACCTACGAGGTATGGTTTTGAGGACATGGTGGGTTATGCACTGCAGGTTGCTGAAGAGGTAGATACATCTGAGCCGTCTACTTACAAAGAAGCCATTTTAAGTCCTGATTCTGAAAAATGGTTTGCCGCTATGGGAGATGAGATGGAGTCCCTACACAAGAATCAGACATGGGATCTGGTCATACAGCCTTCGGGGAGAAAGATTATTACTTGCAAATGGGTTTTCAAGAAGAAGGAAGGGATATCACCAGCAGAAGGAGTCAAGTATAAAGCCAGGGTTGTTGCCAGAGGTTTCAACCAAAGAGAGGGAGTGGACTACAATGAGATCTTCTCACGAGTGGTCAGACATACTTCCATCCGAGTGTTACTAGCGATAGTTGCACATCAGAATCTGGAGCTTGAACAACTTGATGTGAAGACAGCGTTTCTACATGGAGAGTTGGAGGAAGAGATATACATGACT</gDNA_template>
            <first_frame> Y  V  R  N  W  E  S  *  Q  T  G  G  V  S  S  H  S  E  R  E  R  F  K  G  T  *  R  G  G  S  R  A  T  D  R  N  *  Y  S  R  I  Y  A  I  R  Y  P  S  E  Y  S  S  R  S  A  K  E  G  W  S  S  A  T  Y  E  V  W  F  *  G  H  G  G  L  C  T  A  G  C  *  R  G  R  Y  I  *  A  V  Y  L  Q  R  S  H  F  K  S  *  F  *  K  M  V  C  R  Y  G  R  *  D  G  V  P  T  Q  E  S  D  M  G  S  G  H  T  A  F  G  E  K  D  Y  Y  L  Q  M  G  F  Q  E  E  G  R  D  I  T  S  R  R  S  Q  V  *  S  Q  G  C  C  Q  R  F  Q  P  K  R  G  S  G  L  Q  *  D  L  L  T  S  G  Q  T  Y  F  H  P  S  V  T  S  D  S  C  T  S  E  S  G  A  *  T  T  *  C  E  D  S  V  S  T  W  R  V  G  G  R  D  I  H  D  </first_frame>
            <second_frame>  T  S  E  T  G  S  L  D  K  Q  V  E  F  Q  V  I  Q  N  E  S  D  L  K  E  P  E  E  E  D  Q  E  P  Q  T  E  T  D  I  P  E  S  M  P  S  D  I  H  Q  S  I  A  Q  D  R  P  R  R  V  G  V  R  P  P  T  R  Y  G  F  E  D  M  V  G  Y  A  L  Q  V  A  E  E  V  D  T  S  E  P  S  T  Y  K  E  A  I  L  S  P  D  S  E  K  W  F  A  A  M  G  D  E  M  E  S  L  H  K  N  Q  T  W  D  L  V  I  Q  P  S  G  R  K  I  I  T  C  K  W  V  F  K  K  K  E  G  I  S  P  A  E  G  V  K  Y  K  A  R  V  V  A  R  G  F  N  Q  R  E  G  V  D  Y  N  E  I  F  S  R  V  V  R  H  T  S  I  R  V  L  L  A  I  V  A  H  Q  N  L  E  L  E  Q  L  D  V  K  T  A  F  L  H  G  E  L  E  E  E  I  Y  M  T </second_frame>
            <third_frame>   R  Q  K  L  G  V  L  T  N  R  W  S  F  K  S  F  R  T  R  A  I  *  R  N  L  K  R  R  I  K  S  H  R  Q  K  L  I  F  Q  N  L  C  H  Q  I  S  I  R  V  *  L  K  I  G  Q  G  G  L  E  F  G  H  L  R  G  M  V  L  R  T  W  W  V  M  H  C  R  L  L  K  R  *  I  H  L  S  R  L  L  T  K  K  P  F  *  V  L  I  L  K  N  G  L  P  L  W  E  M  R  W  S  P  Y  T  R  I  R  H  G  I  W  S  Y  S  L  R  G  E  R  L  L  L  A  N  G  F  S  R  R  R  K  G  Y  H  Q  Q  K  E  S  S  I  K  P  G  L  L  P  E  V  S  T  K  E  R  E  W  T  T  M  R  S  S  H  E  W  S  D  I  L  P  S  E  C  Y  *  R  *  L  H  I  R  I  W  S  L  N  N  L  M  *  R  Q  R  F  Y  M  E  S  W  R  K  R  Y  T  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="83586" stop="84233"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>648</number_coding_nucleotides>
                  <number_encoded_amino_acids>216</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSETGSLDKQVEFQVIQNESDLKEPEEEDQEPQTETDIPESMPSDIHQSIAQDRPRRVGVRPPTRYGFEDMVGYALQVAEEVDTSEPSTYKEAILSPDSEKWFAAMGDEMESLHKNQTWDLVIQPSGRKIITCKWVFKKKEGISPAEGVKYKARVVARGFNQREGVDYNEIFSRVVRHTSIRVLLAIVAHQNLELEQLDVKTAFLHGELEEEIYMT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="+" PGL_start="84244" PGL_stop="85051"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84244" e_stop="85051"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="84244" e_stop="85051" e_length="808"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84244" stop="85051"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E343338" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTTCCAAGTTCCAGGGAAGGAAAATCACGTCTGCAAGTTGAAGAAGTCCTTATATGGACTTAAGCAGTCTCCAAGACAGTGGTATAAAAGGTTTGACAGCTATATGGTGAAGTTGGGCTATACTCGGAGCTCATATGATTGTTGTGTCTACTACAATAGGCTCAATGATGATTCATTCATCTATCTGGTGCTTTATGTAGATGATATGTTGATAGCTGCAAAGAAGAAGTATGACATTCAGAAGCTGAAGGGTTTACTTAGTGCTGAGTTTGAGATGAAGGATCTGGGAGCCGCTCGGAAGATTTTAGGGATGGAGATCATTAGAGACAGAGAGAGAAGGAAACTTTTCTTGTCACAGAGAAGCTACATTCAGAAGGTCTTGGCGAGGTTTGACATGTCTTCATCTAAGCCCATTGATACCCCCAGTGCTGCCAATATCCATCTCACTGCCATGTTCGCTCCACAGTCAGAAGAAGAGAAGGAGTATATGTCACGAGTCCCTTATGCCAGTGCCGTAGGAAGTTTGATGTATGCTATGGTCTGTACAAGGTCAGATTTAGCACATGCAGTCAGTGTAGTGAGCAGATTCATGGGACAACCAGGGAGAGAACATTGGCAGGCTGTGAAGAGAATTTTTCGGTACCTTAGAGGTACATCTGACGTTGGTCTCATTTATGGAGGTGATACTCAGTGCTTGGTTACTGGCTATTCTGATTCAGACTATGCTGGAGATGTTGACACAAGAAGATCGATGACTGGCTATGTGTTTACCCTTGGAGGATCTGTCGTCAGTTGGAAGGCAACTTT</gDNA_template>
            <first_frame> V  S  K  F  Q  G  R  K  I  T  S  A  S  *  R  S  P  Y  M  D  L  S  S  L  Q  D  S  G  I  K  G  L  T  A  I  W  *  S  W  A  I  L  G  A  H  M  I  V  V  S  T  T  I  G  S  M  M  I  H  S  S  I  W  C  F  M  *  M  I  C  *  *  L  Q  R  R  S  M  T  F  R  S  *  R  V  Y  L  V  L  S  L  R  *  R  I  W  E  P  L  G  R  F  *  G  W  R  S  L  E  T  E  R  E  G  N  F  S  C  H  R  E  A  T  F  R  R  S  W  R  G  L  T  C  L  H  L  S  P  L  I  P  P  V  L  P  I  S  I  S  L  P  C  S  L  H  S  Q  K  K  R  R  S  I  C  H  E  S  L  M  P  V  P  *  E  V  *  C  M  L  W  S  V  Q  G  Q  I  *  H  M  Q  S  V  *  *  A  D  S  W  D  N  Q  G  E  N  I  G  R  L  *  R  E  F  F  G  T  L  E  V  H  L  T  L  V  S  F  M  E  V  I  L  S  A  W  L  L  A  I  L  I  Q  T  M  L  E  M  L  T  Q  E  D  R  *  L  A  M  C  L  P  L  E  D  L  S  S  V  G  R  Q  L  </first_frame>
            <second_frame>  F  P  S  S  R  E  G  K  S  R  L  Q  V  E  E  V  L  I  W  T  *  A  V  S  K  T  V  V  *  K  V  *  Q  L  Y  G  E  V  G  L  Y  S  E  L  I  *  L  L  C  L  L  Q  *  A  Q  *  *  F  I  H  L  S  G  A  L  C  R  *  Y  V  D  S  C  K  E  E  V  *  H  S  E  A  E  G  F  T  *  C  *  V  *  D  E  G  S  G  S  R  S  E  D  F  R  D  G  D  H  *  R  Q  R  E  K  E  T  F  L  V  T  E  K  L  H  S  E  G  L  G  E  V  *  H  V  F  I  *  A  H  *  Y  P  Q  C  C  Q  Y  P  S  H  C  H  V  R  S  T  V  R  R  R  E  G  V  Y  V  T  S  P  L  C  Q  C  R  R  K  F  D  V  C  Y  G  L  Y  K  V  R  F  S  T  C  S  Q  C  S  E  Q  I  H  G  T  T  R  E  R  T  L  A  G  C  E  E  N  F  S  V  P  *  R  Y  I  *  R  W  S  H  L  W  R  *  Y  S  V  L  G  Y  W  L  F  *  F  R  L  C  W  R  C  *  H  K  K  I  D  D  W  L  C  V  Y  P  W  R  I  C  R  Q  L  E  G  N  F </second_frame>
            <third_frame>   F  Q  V  P  G  K  E  N  H  V  C  K  L  K  K  S  L  Y  G  L  K  Q  S  P  R  Q  W  Y  K  R  F  D  S  Y  M  V  K  L  G  Y  T  R  S  S  Y  D  C  C  V  Y  Y  N  R  L  N  D  D  S  F  I  Y  L  V  L  Y  V  D  D  M  L  I  A  A  K  K  K  Y  D  I  Q  K  L  K  G  L  L  S  A  E  F  E  M  K  D  L  G  A  A  R  K  I  L  G  M  E  I  I  R  D  R  E  R  R  K  L  F  L  S  Q  R  S  Y  I  Q  K  V  L  A  R  F  D  M  S  S  S  K  P  I  D  T  P  S  A  A  N  I  H  L  T  A  M  F  A  P  Q  S  E  E  E  K  E  Y  M  S  R  V  P  Y  A  S  A  V  G  S  L  M  Y  A  M  V  C  T  R  S  D  L  A  H  A  V  S  V  V  S  R  F  M  G  Q  P  G  R  E  H  W  Q  A  V  K  R  I  F  R  Y  L  R  G  T  S  D  V  G  L  I  Y  G  G  D  T  Q  C  L  V  T  G  Y  S  D  S  D  Y  A  G  D  V  D  T  R  R  S  M  T  G  Y  V  F  T  L  G  G  S  V  V  S  W  K  A  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84246" stop="85049"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>804</number_coding_nucleotides>
                  <number_encoded_amino_acids>268</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQVPGKENHVCKLKKSLYGLKQSPRQWYKRFDSYMVKLGYTRSSYDCCVYYNRLNDDSFIYLVLYVDDMLIAAKKKYDIQKLKGLLSAEFEMKDLGAARKILGMEIIRDRERRKLFLSQRSYIQKVLARFDMSSSKPIDTPSAANIHLTAMFAPQSEEEKEYMSRVPYASAVGSLMYAMVCTRSDLAHAVSVVSRFMGQPGREHWQAVKRIFRYLRGTSDVGLIYGGDTQCLVTGYSDSDYAGDVDTRRSMTGYVFTLGGSVVSWKAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="23" PGL_strand="-" PGL_start="88714" PGL_stop="87861"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88714" e_stop="87861"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="88714" e_stop="87861" e_length="854"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88714" stop="87861"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713264" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="23" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTACAAAAAAAATAAAAATGACAGATTTCAACTTCGACAGTACTTGTACTTCTCCATATATAAGTGCACCTTCAAGTCCTCAACATTTTGGTACAACATTCTTTTTTAGTGCTCCTACTAGCCCTACTCGTATCTCCGCTCTTCACAGCGAATCTAACGTTGCTGATCATGATCATGATAACGATAATGATGATTTTGCTTTTGAATTTAGCGGATATGAAATAATGGAGAAAAGTACAATAGCAGCTGACGAGTTATTTGATGGCGGGAAAATCAAATTAAAGCAAGTAATGGTACCTATTGATTCGCCGAAAATGAAAAAAAACGACAAAGATAGTGTAAATTCTGAACCAAATTCTTCTATGAGAGTATCGGGTGTTTTGTTAATCAATGAAAATGCGGAGAAAACAGAGTCCTCTGTTTCGTCGTTATGGAAAAGAAGATGGAAATTGAAAGATTTATTGTTGTTTAGAAGTGCTTCTGAGAGTCGAGCTAGTAGTAATACGATAGAGATGAGTAAGTATGCGTTGGTGAAGAAAGTTCGTGAAGAGGAGGGGTCGAGCTCGAGCTTGAGGATAAGGAAGATGGAATCGAATTCGGCTCATGAATTGCATTATAAGATGAAGAAGGAGGTGTTGAAAGATATGAAGAAGAAAACATTTTTACCATATAAGCAAAGTGTTCTTAGTTGGCATGGTTGTTATGGTCTTGATGATACAATTACAATGTATATTTCTCCTCGTTCGTAGTTTATTGTATGATTATTATCATGTTTGATTGTATATTTATTTGATATTATACATTTCGCTTCCGTGCAGGATTTGAACTTGATGAGTTTAATTTCTGAATTTAA</gDNA_template>
            <first_frame> T  T  K  K  I  K  M  T  D  F  N  F  D  S  T  C  T  S  P  Y  I  S  A  P  S  S  P  Q  H  F  G  T  T  F  F  F  S  A  P  T  S  P  T  R  I  S  A  L  H  S  E  S  N  V  A  D  H  D  H  D  N  D  N  D  D  F  A  F  E  F  S  G  Y  E  I  M  E  K  S  T  I  A  A  D  E  L  F  D  G  G  K  I  K  L  K  Q  V  M  V  P  I  D  S  P  K  M  K  K  N  D  K  D  S  V  N  S  E  P  N  S  S  M  R  V  S  G  V  L  L  I  N  E  N  A  E  K  T  E  S  S  V  S  S  L  W  K  R  R  W  K  L  K  D  L  L  L  F  R  S  A  S  E  S  R  A  S  S  N  T  I  E  M  S  K  Y  A  L  V  K  K  V  R  E  E  E  G  S  S  S  S  L  R  I  R  K  M  E  S  N  S  A  H  E  L  H  Y  K  M  K  K  E  V  L  K  D  M  K  K  K  T  F  L  P  Y  K  Q  S  V  L  S  W  H  G  C  Y  G  L  D  D  T  I  T  M  Y  I  S  P  R  S  *  F  I  V  *  L  L  S  C  L  I  V  Y  L  F  D  I  I  H  F  A  S  V  Q  D  L  N  L  M  S  L  I  S  E  F   </first_frame>
            <second_frame>  L  Q  K  K  *  K  *  Q  I  S  T  S  T  V  L  V  L  L  H  I  *  V  H  L  Q  V  L  N  I  L  V  Q  H  S  F  L  V  L  L  L  A  L  L  V  S  P  L  F  T  A  N  L  T  L  L  I  M  I  M  I  T  I  M  M  I  L  L  L  N  L  A  D  M  K  *  W  R  K  V  Q  *  Q  L  T  S  Y  L  M  A  G  K  S  N  *  S  K  *  W  Y  L  L  I  R  R  K  *  K  K  T  T  K  I  V  *  I  L  N  Q  I  L  L  *  E  Y  R  V  F  C  *  S  M  K  M  R  R  K  Q  S  P  L  F  R  R  Y  G  K  E  D  G  N  *  K  I  Y  C  C  L  E  V  L  L  R  V  E  L  V  V  I  R  *  R  *  V  S  M  R  W  *  R  K  F  V  K  R  R  G  R  A  R  A  *  G  *  G  R  W  N  R  I  R  L  M  N  C  I  I  R  *  R  R  R  C  *  K  I  *  R  R  K  H  F  Y  H  I  S  K  V  F  L  V  G  M  V  V  M  V  L  M  I  Q  L  Q  C  I  F  L  L  V  R  S  L  L  Y  D  Y  Y  H  V  *  L  Y  I  Y  L  I  L  Y  I  S  L  P  C  R  I  *  T  *  *  V  *  F  L  N  L  </second_frame>
            <third_frame>   Y  K  K  N  K  N  D  R  F  Q  L  R  Q  Y  L  Y  F  S  I  Y  K  C  T  F  K  S  S  T  F  W  Y  N  I  L  F  *  C  S  Y  *  P  Y  S  Y  L  R  S  S  Q  R  I  *  R  C  *  S  *  S  *  *  R  *  *  *  F  C  F  *  I  *  R  I  *  N  N  G  E  K  Y  N  S  S  *  R  V  I  *  W  R  E  N  Q  I  K  A  S  N  G  T  Y  *  F  A  E  N  E  K  K  R  Q  R  *  C  K  F  *  T  K  F  F  Y  E  S  I  G  C  F  V  N  Q  *  K  C  G  E  N  R  V  L  C  F  V  V  M  E  K  K  M  E  I  E  R  F  I  V  V  *  K  C  F  *  E  S  S  *  *  *  Y  D  R  D  E  *  V  C  V  G  E  E  S  S  *  R  G  G  V  E  L  E  L  E  D  K  E  D  G  I  E  F  G  S  *  I  A  L  *  D  E  E  G  G  V  E  R  Y  E  E  E  N  I  F  T  I  *  A  K  C  S  *  L  A  W  L  L  W  S  *  *  Y  N  Y  N  V  Y  F  S  S  F  V  V  Y  C  M  I  I  I  M  F  D  C  I  F  I  *  Y  Y  T  F  R  F  R  A  G  F  E  L  D  E  F  N  F  *  I  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="23" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88714" stop="87965"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTKKIKMTDFNFDSTCTSPYISAPSSPQHFGTTFFFSAPTSPTRISALHSESNVADHDHDNDNDDFAFEFSGYEIMEKSTIAADELFDGGKIKLKQVMVPIDSPKMKKNDKDSVNSEPNSSMRVSGVLLINENAEKTESSVSSLWKRRWKLKDLLLFRSASESRASSNTIEMSKYALVKKVREEEGSSSSLRIRKMESNSAHELHYKMKKEVLKDMKKKTFLPYKQSVLSWHGCYGLDDTITMYISPRS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="24" PGL_strand="-" PGL_start="94346" PGL_stop="92816"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="94346" e_stop="94109"/>
            <exon e_start="93698" e_stop="93553"/>
            <exon e_start="92984" e_stop="92816"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.923" e_score="0.924"/>
          <exon-intron don_prob="0.999" acc_prob="0.986" e_score="0.966"/>
          <exon-only e_score="0.834"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.924">
            <gDNA_exon_boundary e_start="94346" e_stop="94109" e_length="238"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.923">
            <gDNA_intron_boundary i_start="94108" i_stop="93699" i_length="410"/>
          </intron>
          <exon e_serial="2" e_score="0.966">
            <gDNA_exon_boundary e_start="93698" e_stop="93553" e_length="146"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.986">
            <gDNA_intron_boundary i_start="93552" i_stop="92985" i_length="568"/>
          </intron>
          <exon e_serial="3" e_score="0.834">
            <gDNA_exon_boundary e_start="92984" e_stop="92816" e_length="169"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94346" stop="94109"/>
              <exon start="93698" stop="93553"/>
              <exon start="92984" stop="92816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474393" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="94346" stop="94109"/>
              <exon start="93698" stop="93553"/>
              <exon start="92984" stop="92933"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414745" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="24" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCACAAGCTCCTAATTCCACAGTTTCGGAAGTCATGACTAATCCGGATGCTACTTCTTCCTCGGATTGTTCTGACCAACCAAAGATTTTAACTGTCTCATGTTCTGAAGTCTCTCCTCCGTCCGAGCAGAATCTGCAACAAGTTAATTGGGACTTGTTTAAAGAAGTATCTGATTTTTTGAAGCTTATTGGCAGTGAAAACGATGGAACCACCTCGACTGTCGCTCAGAAGATAAAG : GAGGAAATAAATATGCACATAAAGTTTTTGACTGCTGCCATTACTCTGCCTGAGCTGAAGAAGCCTGACGCTGGCGAGGACATGGCTGAGGAAGTGCAAAGTATGCTTCAGGAGCTGCAACAGCTCCATTCATTTTTGGATACGAG : TAATTTGGAAGTAGCAAAAGGTGAACAACTATTGAAGAGCTTGTTGTCAAGAAAGTCCAAGATTGAAGCTTTATTGAGTCAATGTATTGTATCAACAACATTGAAGGATTCATGTGAGGAACAAGGTAATGCAGTGTGTGTTGAAGATGAAAAGATTGAGTCACCGTCT</gDNA_template>
            <first_frame> V  T  S  S  *  F  H  S  F  G  S  H  D  *  S  G  C  Y  F  F  L  G  L  F  *  P  T  K  D  F  N  C  L  M  F  *  S  L  S  S  V  R  A  E  S  A  T  S  *  L  G  L  V  *  R  S  I  *  F  F  E  A  Y  W  Q  *  K  R  W  N  H  L  D  C  R  S  E  D  K   : G  G  N  K  Y  A  H  K  V  F  D  C  C  H  Y  S  A  *  A  E  E  A  *  R  W  R  G  H  G  *  G  S  A  K  Y  A  S  G  A  A  T  A  P  F  I  F  G  Y  E  :  *  F  G  S  S  K  R  *  T  T  I  E  E  L  V  V  K  K  V  Q  D  *  S  F  I  E  S  M  Y  C  I  N  N  I  E  G  F  M  *  G  T  R  *  C  S  V  C  *  R  *  K  D  *  V  T  V  </first_frame>
            <second_frame>  S  Q  A  P  N  S  T  V  S  E  V  M  T  N  P  D  A  T  S  S  S  D  C  S  D  Q  P  K  I  L  T  V  S  C  S  E  V  S  P  P  S  E  Q  N  L  Q  Q  V  N  W  D  L  F  K  E  V  S  D  F  L  K  L  I  G  S  E  N  D  G  T  T  S  T  V  A  Q  K  I  K  :  E  E  I  N  M  H  I  K  F  L  T  A  A  I  T  L  P  E  L  K  K  P  D  A  G  E  D  M  A  E  E  V  Q  S  M  L  Q  E  L  Q  Q  L  H  S  F  L  D  T  S :   N  L  E  V  A  K  G  E  Q  L  L  K  S  L  L  S  R  K  S  K  I  E  A  L  L  S  Q  C  I  V  S  T  T  L  K  D  S  C  E  E  Q  G  N  A  V  C  V  E  D  E  K  I  E  S  P  S </second_frame>
            <third_frame>   H  K  L  L  I  P  Q  F  R  K  S  *  L  I  R  M  L  L  L  P  R  I  V  L  T  N  Q  R  F  *  L  S  H  V  L  K  S  L  L  R  P  S  R  I  C  N  K  L  I  G  T  C  L  K  K  Y  L  I  F  *  S  L  L  A  V  K  T  M  E  P  P  R  L  S  L  R  R  *  R :   R  K  *  I  C  T  *  S  F  *  L  L  P  L  L  C  L  S  *  R  S  L  T  L  A  R  T  W  L  R  K  C  K  V  C  F  R  S  C  N  S  S  I  H  F  W  I  R   : V  I  W  K  *  Q  K  V  N  N  Y  *  R  A  C  C  Q  E  S  P  R  L  K  L  Y  *  V  N  V  L  Y  Q  Q  H  *  R  I  H  V  R  N  K  V  M  Q  C  V  L  K  M  K  R  L  S  H  R   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="24" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="94345" stop="94109"/>
                    <exon start="93698" stop="93553"/>
                    <exon start="92984" stop="92816"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>552</number_coding_nucleotides>
                  <number_encoded_amino_acids>184</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQAPNSTVSEVMTNPDATSSSDCSDQPKILTVSCSEVSPPSEQNLQQVNWDLFKEVSDFLKLIGSENDGTTSTVAQKIKEEINMHIKFLTAAITLPELKKPDAGEDMAEEVQSMLQELQQLHSFLDTSNLEVAKGEQLLKSLLSRKSKIEALLSQCIVSTTLKDSCEEQGNAVCVEDEKIESPS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="25" PGL_strand="+" PGL_start="131326" PGL_stop="131821"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="131326" e_stop="131821"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="131326" e_stop="131821" e_length="496"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="131326" stop="131821"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348076" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="25" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCCGTCCAGTAGCTCCTTCACTCAATAGTCTTGCGTTGTTTGGAAAAAAACTCGAACAAGAACATCAACATGGAGGTTGATCTCCGTTCAAATGAAACCAATATCACTGCAAAGTCACCACTTGTTAGCAGAAACAACAAGCCAGAAAAGAAAAGTGTTAAGTTTCCAGCATCACCAAGATTTCAACGAAGAGATTCATCACCACACGTTACAAGACGAGTAGTGAGAACAGCAGCAACAAGTCATTACAGTCTACGAAAACTTCACGGATCAGCTAACAAAGAGATCATAAAGAGAGCACTAACACCACCAGCTCGTCGACCAACTTTGAGATGGTTGGATTTCAAACCAACTCCAAGTCGACTTTGTAATATGTCTGCAGCATAGTTGTAGCTACTTGAATGTACAAAAGATGTAACAATTTTTTTTTATTTGTTTACTCTATATTATCATCAAGAATCAAACATTTTCATTTGTTCTGTTTTACAAGAAGCA</gDNA_template>
            <first_frame> F  R  P  V  A  P  S  L  N  S  L  A  L  F  G  K  K  L  E  Q  E  H  Q  H  G  G  *  S  P  F  K  *  N  Q  Y  H  C  K  V  T  T  C  *  Q  K  Q  Q  A  R  K  E  K  C  *  V  S  S  I  T  K  I  S  T  K  R  F  I  T  T  R  Y  K  T  S  S  E  N  S  S  N  K  S  L  Q  S  T  K  T  S  R  I  S  *  Q  R  D  H  K  E  S  T  N  T  T  S  S  S  T  N  F  E  M  V  G  F  Q  T  N  S  K  S  T  L  *  Y  V  C  S  I  V  V  A  T  *  M  Y  K  R  C  N  N  F  F  L  F  V  Y  S  I  L  S  S  R  I  K  H  F  H  L  F  C  F  T  R  S  </first_frame>
            <second_frame>  S  V  Q  *  L  L  H  S  I  V  L  R  C  L  E  K  N  S  N  K  N  I  N  M  E  V  D  L  R  S  N  E  T  N  I  T  A  K  S  P  L  V  S  R  N  N  K  P  E  K  K  S  V  K  F  P  A  S  P  R  F  Q  R  R  D  S  S  P  H  V  T  R  R  V  V  R  T  A  A  T  S  H  Y  S  L  R  K  L  H  G  S  A  N  K  E  I  I  K  R  A  L  T  P  P  A  R  R  P  T  L  R  W  L  D  F  K  P  T  P  S  R  L  C  N  M  S  A  A  *  L  *  L  L  E  C  T  K  D  V  T  I  F  F  Y  L  F  T  L  Y  Y  H  Q  E  S  N  I  F  I  C  S  V  L  Q  E  A </second_frame>
            <third_frame>   P  S  S  S  S  F  T  Q  *  S  C  V  V  W  K  K  T  R  T  R  T  S  T  W  R  L  I  S  V  Q  M  K  P  I  S  L  Q  S  H  H  L  L  A  E  T  T  S  Q  K  R  K  V  L  S  F  Q  H  H  Q  D  F  N  E  E  I  H  H  H  T  L  Q  D  E  *  *  E  Q  Q  Q  Q  V  I  T  V  Y  E  N  F  T  D  Q  L  T  K  R  S  *  R  E  H  *  H  H  Q  L  V  D  Q  L  *  D  G  W  I  S  N  Q  L  Q  V  D  F  V  I  C  L  Q  H  S  C  S  Y  L  N  V  Q  K  M  *  Q  F  F  F  I  C  L  L  Y  I  I  I  K  N  Q  T  F  S  F  V  L  F  Y  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="25" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="131339" stop="131713"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>372</number_coding_nucleotides>
                  <number_encoded_amino_acids>124</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLHSIVLRCLEKNSNKNINMEVDLRSNETNITAKSPLVSRNNKPEKKSVKFPASPRFQRRDSSPHVTRRVVRTAATSHYSLRKLHGSANKEIIKRALTPPARRPTLRWLDFKPTPSRLCNMSAA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="26" PGL_strand="-" PGL_start="135205" PGL_stop="131383"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135205" e_stop="134832"/>
            <exon e_start="134534" e_stop="134485"/>
            <exon e_start="134131" e_stop="134029"/>
            <exon e_start="133408" e_stop="133355"/>
            <exon e_start="132648" e_stop="132490"/>
            <exon e_start="132396" e_stop="132274"/>
            <exon e_start="132176" e_stop="132127"/>
            <exon e_start="132025" e_stop="131383"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.881" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.938" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="135205" e_stop="134832" e_length="374"/>
          </exon>
          <intron i_serial="1" don_prob="0.881" acc_prob="0.994">
            <gDNA_intron_boundary i_start="134831" i_stop="134535" i_length="297"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="134534" e_stop="134485" e_length="50"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.966">
            <gDNA_intron_boundary i_start="134484" i_stop="134132" i_length="353"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="134131" e_stop="134029" e_length="103"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="134028" i_stop="133409" i_length="620"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="133408" e_stop="133355" e_length="54"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="1.000">
            <gDNA_intron_boundary i_start="133354" i_stop="132649" i_length="706"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="132648" e_stop="132490" e_length="159"/>
          </exon>
          <intron i_serial="5" don_prob="0.969" acc_prob="0.951">
            <gDNA_intron_boundary i_start="132489" i_stop="132397" i_length="93"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="132396" e_stop="132274" e_length="123"/>
          </exon>
          <intron i_serial="6" don_prob="0.968" acc_prob="0.935">
            <gDNA_intron_boundary i_start="132273" i_stop="132177" i_length="97"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="132176" e_stop="132127" e_length="50"/>
          </exon>
          <intron i_serial="7" don_prob="0.938" acc_prob="0.979">
            <gDNA_intron_boundary i_start="132126" i_stop="132026" i_length="101"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="132025" e_stop="131383" e_length="643"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135205" stop="134832"/>
              <exon start="134534" stop="134485"/>
              <exon start="134131" stop="134029"/>
              <exon start="133408" stop="133355"/>
              <exon start="132648" stop="132490"/>
              <exon start="132396" stop="132380"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E345004" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134930" stop="134832"/>
              <exon start="134534" stop="134485"/>
              <exon start="134131" stop="134029"/>
              <exon start="133408" stop="133355"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E463508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134520" stop="134485"/>
              <exon start="134131" stop="134029"/>
              <exon start="133408" stop="133355"/>
              <exon start="132648" stop="132490"/>
              <exon start="132396" stop="132274"/>
              <exon start="132176" stop="132127"/>
              <exon start="132025" stop="131768"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E538193" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132573" stop="132490"/>
              <exon start="132396" stop="132274"/>
              <exon start="132176" stop="132127"/>
              <exon start="132025" stop="131769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E268081" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132388" stop="132274"/>
              <exon start="132176" stop="132127"/>
              <exon start="132025" stop="131383"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704482" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132334" stop="132274"/>
              <exon start="132176" stop="132127"/>
              <exon start="132025" stop="131735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E217901" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="132276" stop="132274"/>
              <exon start="132176" stop="132127"/>
              <exon start="132025" stop="131735"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218121" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="26" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTTACTTTACAATATTGTTTTGCTGCAGAATTTGTGAAATCTTATGCACTTGTGATAGTAACATTGCCGGTTTGCATGATCGTATTCCAGTAATACTCTTTATCATGCTTGAATGTCTGATATGGTGTCAACGAAACCAGTGAGGATCTCAAGGATTGATGTTTTCACAGACTTCTTAAATTTCTTAAGCAATCATCTGAACAGATGATATCTTTAAACACAAACCTTACTGCAATCAAGATGAATTTCTTTTTATCTTGTCAGGGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAGATAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG : GCCCCAGGCTTATCATTTTTGTTGCCTCAGCAGTACGTGAAATACCCAAG : GCTCACAGGGAGAGGAATAGTTGAATTTACAGTTGAGAAAGTAGATGGTTCAGCATTTTCTCCTGAATCTGCAGGTGAAGCCAAAAGCACTGCAAAAATTCAG : GTTGTTATAGATGGGTTTTCAGCACCACTGACTGCAGGAAACTTCGCAAAACTG : GTGGTAGATGGGGCATATGATGGGATGAAGCTGACTTGTGCAAACCAAGCAATTCTTTCGGACAGCGAGGTGGGAAAGACCACAGGATACAGTGTTCCATTGGAAATCAAGCCAGCCGGACAATTTGAGCCTCTTTACAGAACAACATTAAGCATTCAG : GATGGGGAGCTGCCTGTGCTTCCGCTATCCGTTTATGGTGCTGTTGCAATGGCTCATAGTGATGTATCAGATGAGAATTCATCACCAAGTCAGTTCTTCTTCTACCTTTACGATAAGAGAAAT : TCTGGCTTGGGAGGATTGTCATTTGATGAGGGTCAATTTTCGGTCTTCGG : ATATACAACTGTTGGGAGAGATATCCTTCCTCAGATCAAAACGGGTGACATAATTCGATCTGCAAAGCTGGTGGAAGGACAAGACCGCCTCGTTTTACCACCACAGGATAACTAACCTTGTTATATCCTCAATTTTTTTGGAATATTCAACATGTCATTCTTCGTTACCCGTCCGTCATTTATTAGTACCCAAAAAATGGATGCTGCTTCTTGTAAAACAGAACAAATGAAAATGTTTGATTCTTGATGATAATATAGAGTAAACAAATAAAAAAAAATTGTTACATCTTTTGTACATTCAAGTAGCTACAACTATGCTGCAGACATATTACAAAGTCGACTTGGAGTTGGTTTGAAATCCAACCATCTCAAAGTTGGTCGACGAGCTGGTGGTGTTAGTGCTCTCTTTATGATCTCTTTGTTAGCTGATCCGTGAAGTTTTCGTAGACTGTAATGACTTGTTGCTGCTGTTCTCACTACTCGTCTTGTAACGTGTGGTGATGAATCTCTTCGTTGAAATCTTGGTGATGCTGGAAACTTAACACTTTTCTTTTCTGGCTTGTTGTTTCTGCTAACAAGTGGTGACTTTGCAGTGATATTGGTTTCATTTGAACGGAGATCAACCTCCATGTTGATGTTCTTG</gDNA_template>
            <first_frame> L  L  L  Y  N  I  V  L  L  Q  N  L  *  N  L  M  H  L  *  *  *  H  C  R  F  A  *  S  Y  S  S  N  T  L  Y  H  A  *  M  S  D  M  V  S  T  K  P  V  R  I  S  R  I  D  V  F  T  D  F  L  N  F  L  S  N  H  L  N  R  *  Y  L  *  T  Q  T  L  L  Q  S  R  *  I  S  F  Y  L  V  R  V  D  Y  R  N  F  Y  S  T  *  R  I  K  I  Q  I  K  Y  P  F  V  L  H  L  H  W  I  L  L  H  R  W  S  C  Y  R :   P  Q  A  Y  H  F  C  C  L  S  S  T  *  N  T  Q   : G  S  Q  G  E  E  *  L  N  L  Q  L  R  K  *  M  V  Q  H  F  L  L  N  L  Q  V  K  P  K  A  L  Q  K  F  R :   L  L  *  M  G  F  Q  H  H  *  L  Q  E  T  S  Q  N  W :   W  *  M  G  H  M  M  G  *  S  *  L  V  Q  T  K  Q  F  F  R  T  A  R  W  E  R  P  Q  D  T  V  F  H  W  K  S  S  Q  P  D  N  L  S  L  F  T  E  Q  H  *  A  F  R :   M  G  S  C  L  C  F  R  Y  P  F  M  V  L  L  Q  W  L  I  V  M  Y  Q  M  R  I  H  H  Q  V  S  S  S  S  T  F  T  I  R  E  I :   L  A  W  E  D  C  H  L  M  R  V  N  F  R  S  S   : D  I  Q  L  L  G  E  I  S  F  L  R  S  K  R  V  T  *  F  D  L  Q  S  W  W  K  D  K  T  A  S  F  Y  H  H  R  I  T  N  L  V  I  S  S  I  F  L  E  Y  S  T  C  H  S  S  L  P  V  R  H  L  L  V  P  K  K  W  M  L  L  L  V  K  Q  N  K  *  K  C  L  I  L  D  D  N  I  E  *  T  N  K  K  K  L  L  H  L  L  Y  I  Q  V  A  T  T  M  L  Q  T  Y  Y  K  V  D  L  E  L  V  *  N  P  T  I  S  K  L  V  D  E  L  V  V  L  V  L  S  L  *  S  L  C  *  L  I  R  E  V  F  V  D  C  N  D  L  L  L  L  F  S  L  L  V  L  *  R  V  V  M  N  L  F  V  E  I  L  V  M  L  E  T  *  H  F  S  F  L  A  C  C  F  C  *  Q  V  V  T  L  Q  *  Y  W  F  H  L  N  G  D  Q  P  P  C  *  C  S   </first_frame>
            <second_frame>  C  Y  F  T  I  L  F  C  C  R  I  C  E  I  L  C  T  C  D  S  N  I  A  G  L  H  D  R  I  P  V  I  L  F  I  M  L  E  C  L  I  W  C  Q  R  N  Q  *  G  S  Q  G  L  M  F  S  Q  T  S  *  I  S  *  A  I  I  *  T  D  D  I  F  K  H  K  P  Y  C  N  Q  D  E  F  L  F  I  L  S  G  W  I  T  E  T  S  T  V  H  K  G  *  R  S  R  *  S  I  R  L  S  C  I  Y  I  G  Y  Y  C  T  D  G  V  V  T   : G  P  R  L  I  I  F  V  A  S  A  V  R  E  I  P  K  :  A  H  R  E  R  N  S  *  I  Y  S  *  E  S  R  W  F  S  I  F  S  *  I  C  R  *  S  Q  K  H  C  K  N  S   : G  C  Y  R  W  V  F  S  T  T  D  C  R  K  L  R  K  T   : G  G  R  W  G  I  *  W  D  E  A  D  L  C  K  P  S  N  S  F  G  Q  R  G  G  K  D  H  R  I  Q  C  S  I  G  N  Q  A  S  R  T  I  *  A  S  L  Q  N  N  I  K  H  S   : G  W  G  A  A  C  A  S  A  I  R  L  W  C  C  C  N  G  S  *  *  C  I  R  *  E  F  I  T  K  S  V  L  L  L  P  L  R  *  E  K   : F  W  L  G  R  I  V  I  *  *  G  S  I  F  G  L  R  :  I  Y  N  C  W  E  R  Y  P  S  S  D  Q  N  G  *  H  N  S  I  C  K  A  G  G  R  T  R  P  P  R  F  T  T  T  G  *  L  T  L  L  Y  P  Q  F  F  W  N  I  Q  H  V  I  L  R  Y  P  S  V  I  Y  *  Y  P  K  N  G  C  C  F  L  *  N  R  T  N  E  N  V  *  F  L  M  I  I  *  S  K  Q  I  K  K  N  C  Y  I  F  C  T  F  K  *  L  Q  L  C  C  R  H  I  T  K  S  T  W  S  W  F  E  I  Q  P  S  Q  S  W  S  T  S  W  W  C  *  C  S  L  Y  D  L  F  V  S  *  S  V  K  F  S  *  T  V  M  T  C  C  C  C  S  H  Y  S  S  C  N  V  W  *  *  I  S  S  L  K  S  W  *  C  W  K  L  N  T  F  L  F  W  L  V  V  S  A  N  K  W  *  L  C  S  D  I  G  F  I  *  T  E  I  N  L  H  V  D  V  L  </second_frame>
            <third_frame>   V  T  L  Q  Y  C  F  A  A  E  F  V  K  S  Y  A  L  V  I  V  T  L  P  V  C  M  I  V  F  Q  *  Y  S  L  S  C  L  N  V  *  Y  G  V  N  E  T  S  E  D  L  K  D  *  C  F  H  R  L  L  K  F  L  K  Q  S  S  E  Q  M  I  S  L  N  T  N  L  T  A  I  K  M  N  F  F  L  S  C  Q  G  G  L  Q  K  L  L  Q  Y  I  K  D  K  D  P  D  K  V  S  V  C  L  A  S  T  L  D  T  I  A  Q  M  E  L  L  Q  :  A  P  G  L  S  F  L  L  P  Q  Q  Y  V  K  Y  P  R :   L  T  G  R  G  I  V  E  F  T  V  E  K  V  D  G  S  A  F  S  P  E  S  A  G  E  A  K  S  T  A  K  I  Q  :  V  V  I  D  G  F  S  A  P  L  T  A  G  N  F  A  K  L  :  V  V  D  G  A  Y  D  G  M  K  L  T  C  A  N  Q  A  I  L  S  D  S  E  V  G  K  T  T  G  Y  S  V  P  L  E  I  K  P  A  G  Q  F  E  P  L  Y  R  T  T  L  S  I  Q  :  D  G  E  L  P  V  L  P  L  S  V  Y  G  A  V  A  M  A  H  S  D  V  S  D  E  N  S  S  P  S  Q  F  F  F  Y  L  Y  D  K  R  N  :  S  G  L  G  G  L  S  F  D  E  G  Q  F  S  V  F  G :   Y  T  T  V  G  R  D  I  L  P  Q  I  K  T  G  D  I  I  R  S  A  K  L  V  E  G  Q  D  R  L  V  L  P  P  Q  D  N  *  P  C  Y  I  L  N  F  F  G  I  F  N  M  S  F  F  V  T  R  P  S  F  I  S  T  Q  K  M  D  A  A  S  C  K  T  E  Q  M  K  M  F  D  S  *  *  *  Y  R  V  N  K  *  K  K  I  V  T  S  F  V  H  S  S  S  Y  N  Y  A  A  D  I  L  Q  S  R  L  G  V  G  L  K  S  N  H  L  K  V  G  R  R  A  G  G  V  S  A  L  F  M  I  S  L  L  A  D  P  *  S  F  R  R  L  *  *  L  V  A  A  V  L  T  T  R  L  V  T  C  G  D  E  S  L  R  *  N  L  G  D  A  G  N  L  T  L  F  F  S  G  L  L  F  L  L  T  S  G  D  F  A  V  I  L  V  S  F  E  R  R  S  T  S  M  L  M  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="-"/>
                <serials PGL_serial="26" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="135044" stop="134832"/>
                    <exon start="134534" stop="134485"/>
                    <exon start="134131" stop="134029"/>
                    <exon start="133408" stop="133355"/>
                    <exon start="132648" stop="132490"/>
                    <exon start="132396" stop="132274"/>
                    <exon start="132176" stop="132127"/>
                    <exon start="132025" stop="131911"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>864</number_coding_nucleotides>
                  <number_encoded_amino_acids>288</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CFHRLLKFLKQSSEQMISLNTNLTAIKMNFFLSCQGGLQKLLQYIKDKDPDKVSVCLASTLDTIAQMELLQAPGLSFLLPQQYVKYPRLTGRGIVEFTVEKVDGSAFSPESAGEAKSTAKIQVVIDGFSAPLTAGNFAKLVVDGAYDGMKLTCANQAILSDSEVGKTTGYSVPLEIKPAGQFEPLYRTTLSIQDGELPVLPLSVYGAVAMAHSDVSDENSSPSQFFFYLYDKRNSGLGGLSFDEGQFSVFGYTTVGRDILPQIKTGDIIRSAKLVEGQDRLVLPPQDN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="27" PGL_strand="-" PGL_start="145856" PGL_stop="145417"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="145856" e_stop="145417"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.925"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.925">
            <gDNA_exon_boundary e_start="145856" e_stop="145417" e_length="440"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="145856" stop="145417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="27" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTATAGATGACCAAATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAAAGTAGTTTAAATTTTTTTCTTTAAACTAAGGAATGAAAGAAAAAACAAAATAAGAATAAGAAACTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAAAAGAATCATATATACCCCTAAATAATTTTAAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAATTTTCGTTAAATGAAGAGTATATGTGAGCCATTTTGTAACGGCAAGGGTATATGTGAGCCGTTTGTATAACGGTAAAGGCATATATGTGCCACTTTTATAACGAGGGGTATATCAGCTCTAAATGACAAAGTTGAGGGGTATATAAGACCCTTTTCC</gDNA_template>
            <first_frame> L  L  *  M  T  K  F  F  L  R  I  R  N  *  I  T  I  H  T  K  K  K  *  F  K  F  F  S  L  N  *  G  M  K  E  K  T  K  *  E  *  E  T  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  N  *  N  I  P  *  T  L  I  K  E  S  Y  I  P  L  N  N  F  K  K  K  I  R  S  N  K  Y  K  F  K  T  N  F  L  I  F  V  K  *  R  V  Y  V  S  H  F  V  T  A  R  V  Y  V  S  R  L  Y  N  G  K  G  I  Y  V  P  L  L  *  R  G  V  Y  Q  L  *  M  T  K  L  R  G  I  *  D  P  F   </first_frame>
            <second_frame>  Y  Y  R  *  P  N  F  F  F  E  Y  E  I  K  L  Q  Y  T  Q  K  K  S  S  L  N  F  F  L  *  T  K  E  *  K  K  K  Q  N  K  N  K  K  L  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  K  I  K  I  Y  L  E  L  *  *  K  N  H  I  Y  P  *  I  I  L  K  K  K  L  E  V  T  N  I  N  L  K  L  I  F  *  F  S  L  N  E  E  Y  M  *  A  I  L  *  R  Q  G  Y  M  *  A  V  C  I  T  V  K  A  Y  M  C  H  F  Y  N  E  G  Y  I  S  S  K  *  Q  S  *  G  V  Y  K  T  L  F  </second_frame>
            <third_frame>   I  I  D  D  Q  I  F  S  S  N  T  K  L  N  Y  N  T  H  K  K  K  V  V  *  I  F  F  F  K  L  R  N  E  R  K  N  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  K  L  K  Y  T  L  N  F  D  K  R  I  I  Y  T  P  K  *  F  *  K  K  N  *  K  *  Q  I  *  I  *  N  *  F  F  N  F  R  *  M  K  S  I  C  E  P  F  C  N  G  K  G  I  C  E  P  F  V  *  R  *  R  H  I  C  A  T  F  I  T  R  G  I  S  A  L  N  D  K  V  E  G  Y  I  R  P  F  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0161H10.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="28" PGL_strand="+" PGL_start="157856" PGL_stop="160871"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="157856" e_stop="158066"/>
            <exon e_start="159303" e_stop="159563"/>
            <exon e_start="159670" e_stop="159759"/>
            <exon e_start="160182" e_stop="160277"/>
            <exon e_start="160764" e_stop="160871"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.914" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.816" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="157856" e_stop="158066" e_length="211"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.914">
            <gDNA_intron_boundary i_start="158067" i_stop="159302" i_length="1236"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="159303" e_stop="159563" e_length="261"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.951">
            <gDNA_intron_boundary i_start="159564" i_stop="159669" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="159670" e_stop="159759" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="0.816" acc_prob="0.999">
            <gDNA_intron_boundary i_start="159760" i_stop="160181" i_length="422"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="160182" e_stop="160277" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.991">
            <gDNA_intron_boundary i_start="160278" i_stop="160763" i_length="486"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="160764" e_stop="160871" e_length="108"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157856" stop="158066"/>
              <exon start="159303" stop="159563"/>
              <exon start="159670" stop="159759"/>
              <exon start="160182" stop="160277"/>
              <exon start="160764" stop="160851"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157856" stop="158066"/>
              <exon start="159303" stop="159563"/>
              <exon start="159670" stop="159736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331905" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157856" stop="158066"/>
              <exon start="159303" stop="159536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157921" stop="158066"/>
              <exon start="159303" stop="159563"/>
              <exon start="159670" stop="159759"/>
              <exon start="160182" stop="160277"/>
              <exon start="160764" stop="160871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E342431" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGAGAGAGATAGGCTAGAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG : GAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAG : GATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAG : ATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAG : GGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAAAAAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG</gDNA_template>
            <first_frame> R  E  R  D  R  L  E  R  *  K  E  D  R  D  R  T  L  Q  L  C  F  N  G  F  P  F  I  L  F  H  F  L  S  K  F  H  S  F  V  P  K  *  S  F  L  P  *  P  S  S  T  S  F  P  N  L  C  Y  T  Q  S  H  C  L  E  E  E  C  F  H   : G  I  D  K  E  A  D  C  S  F  H  F  V  N  I  F  G  E  Y  S  Q  A  I  S  E  F  N  G  G  D  H  Y  I  Y  *  N  C  I  S  N  T  F  V  W  F  A  R  F  V  H  F  S  C  R  G  S  A  L  F  P  *  N  K  N  S  P  *  N  R  R  I  S  S  *  K  S  Y  P  S  Q  H  K  Y  E  N  Y  T   : G  F  A  *  G  H  I  V  L  A  Q  D  S  T  A  K  T  F  W  N  N  G  G  *  C  E  E  S  S  *   : D  C  N  R  *  K  G  I  H  L  G  *  H  S  S  *  T  E  R  R  G  F  S  L  V  H  I  S  C  R  R  K   : G  W  I  T  E  T  S  T  V  H  K  G  *  R  S  K  K  S  I  R  L  S  C  I  Y  I  G  Y  Y  C  T  D  G  V  V  T  </first_frame>
            <second_frame>  E  R  E  I  G  *  K  D  K  K  R  I  E  I  E  P  Y  N  S  V  S  M  A  S  P  L  S  S  S  I  F  S  P  N  F  T  H  L  Y  Q  N  K  A  F  F  H  S  H  L  P  L  R  S  P  I  Y  A  T  L  N  R  I  A  L  K  K  N  A  S  M  :  E  L  T  K  R  L  T  A  P  S  I  L  S  T  Y  L  E  S  T  V  K  Q  F  Q  S  L  M  A  V  I  I  I  F  T  E  I  A  S  P  I  P  L  Y  G  L  Q  D  L  S  I  S  P  A  E  A  V  L  Y  S  P  E  T  K  T  L  P  R  T  G  E  L  A  L  R  R  A  I  P  A  N  T  N  M  K  T  I  Q  :  D  S  L  E  D  I  S  Y  L  L  R  I  P  Q  R  K  P  F  G  T  M  E  G  N  V  K  K  A  L  K  :  I  A  T  D  E  K  A  S  I  L  A  S  I  P  A  E  L  K  E  E  G  S  V  L  Y  T  S  L  V  D  G  K  :  G  G  L  Q  K  L  L  Q  Y  I  K  D  K  D  P  K  K  V  S  V  C  L  A  S  T  L  D  T  I  A  Q  M  E  L  L  Q </second_frame>
            <third_frame>   R  E  R  *  A  R  K  I  K  R  G  *  R  *  N  L  T  T  L  F  Q  W  L  P  L  Y  P  L  P  F  S  L  Q  I  S  L  I  C  T  K  I  K  L  S  S  I  A  I  F  H  F  V  P  Q  F  M  L  H  S  I  A  L  P  *  R  R  M  L  P  W :   N  *  Q  R  G  *  L  L  L  P  F  C  Q  H  I  W  R  V  Q  S  S  N  F  R  V  *  W  R  *  S  L  Y  L  L  K  L  H  L  Q  Y  L  C  M  V  C  K  I  C  P  F  L  L  P  R  Q  C  F  I  P  L  K  Q  K  L  S  L  E  Q  E  N  *  L  L  E  E  L  S  Q  P  T  Q  I  *  K  L  Y  R :   I  R  L  R  T  Y  R  T  C  S  G  F  H  S  E  N  L  L  E  Q  W  R  V  M  *  R  K  L  L  R :   L  Q  Q  M  K  R  H  P  S  W  L  A  F  Q  L  N  *  K  K  R  V  Q  S  C  T  H  L  L  *  T  E  R :   V  D  Y  R  N  F  Y  S  T  *  R  I  K  I  Q  K  K  Y  P  F  V  L  H  L  H  W  I  L  L  H  R  W  S  C  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="28" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="157875" stop="158066"/>
                    <exon start="159303" stop="159563"/>
                    <exon start="159670" stop="159759"/>
                    <exon start="160182" stop="160277"/>
                    <exon start="160764" stop="160871"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>747</number_coding_nucleotides>
                  <number_encoded_amino_acids>249</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDKKRIEIEPYNSVSMASPLSSSIFSPNFTHLYQNKAFFHSHLPLRSPIYATLNRIALKKNASMELTKRLTAPSILSTYLESTVKQFQSLMAVIIIFTEIASPIPLYGLQDLSISPAEAVLYSPETKTLPRTGELALRRAIPANTNMKTIQDSLEDISYLLRIPQRKPFGTMEGNVKKALKIATDEKASILASIPAELKEEGSVLYTSLVDGKGGLQKLLQYIKDKDPKKVSVCLASTLDTIAQMELLQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="157861" e_stop="158066"/>
            <exon e_start="159295" e_stop="159563"/>
            <exon e_start="159670" e_stop="159759"/>
            <exon e_start="160182" e_stop="160277"/>
            <exon e_start="160764" e_stop="160871"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.951" e_score="1.000"/>
          <exon-intron don_prob="0.816" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="157861" e_stop="158066" e_length="206"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.967">
            <gDNA_intron_boundary i_start="158067" i_stop="159294" i_length="1228"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="159295" e_stop="159563" e_length="269"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.951">
            <gDNA_intron_boundary i_start="159564" i_stop="159669" i_length="106"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="159670" e_stop="159759" e_length="90"/>
          </exon>
          <intron i_serial="3" don_prob="0.816" acc_prob="0.999">
            <gDNA_intron_boundary i_start="159760" i_stop="160181" i_length="422"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="160182" e_stop="160277" e_length="96"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.991">
            <gDNA_intron_boundary i_start="160278" i_stop="160763" i_length="486"/>
          </intron>
          <exon e_serial="5" e_score="0.981">
            <gDNA_exon_boundary e_start="160764" e_stop="160871" e_length="108"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157861" stop="158066"/>
              <exon start="159295" stop="159563"/>
              <exon start="159670" stop="159699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E441666" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157875" stop="158066"/>
              <exon start="159295" stop="159563"/>
              <exon start="159670" stop="159759"/>
              <exon start="160182" stop="160277"/>
              <exon start="160764" stop="160871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332815" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157938" stop="158066"/>
              <exon start="159295" stop="159563"/>
              <exon start="159670" stop="159759"/>
              <exon start="160182" stop="160277"/>
              <exon start="160764" stop="160871"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E328537" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGAGATAGGCTAGAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG : TCATGCAGGAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAG : GATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAG : ATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAAAGAAGAGGGTTCAGTCTTGTACACATCTCTTGTAGACGGAAAG : GGTGGATTACAGAAACTTCTACAGTACATAAAGGATAAAGATCCAAAAAAAGTATCCGTTTGTCTTGCATCTACATTGGATACTATTGCACAGATGGAGTTGTTACAG</gDNA_template>
            <first_frame> E  R  *  A  R  K  I  K  R  G  *  R  *  N  L  T  T  L  F  Q  W  L  P  L  Y  P  L  P  F  S  L  Q  I  S  L  I  C  T  K  I  K  L  S  S  I  A  I  F  H  F  V  P  Q  F  M  L  H  S  I  A  L  P  *  R  R  M  L  P  C :   H  A  G  I  D  K  E  A  D  C  S  F  H  F  V  N  I  F  G  E  Y  S  Q  A  I  S  E  F  N  G  G  D  H  Y  I  Y  *  N  C  I  S  N  T  F  V  W  F  A  R  F  V  H  F  S  C  R  G  S  A  L  F  P  *  N  K  N  S  P  *  N  R  R  I  S  S  *  K  S  Y  P  S  Q  H  K  Y  E  N  Y  T   : G  F  A  *  G  H  I  V  L  A  Q  D  S  T  A  K  T  F  W  N  N  G  G  *  C  E  E  S  S  *   : D  C  N  R  *  K  G  I  H  L  G  *  H  S  S  *  T  E  R  R  G  F  S  L  V  H  I  S  C  R  R  K   : G  W  I  T  E  T  S  T  V  H  K  G  *  R  S  K  K  S  I  R  L  S  C  I  Y  I  G  Y  Y  C  T  D  G  V  V  T  </first_frame>
            <second_frame>  R  D  R  L  E  R  *  K  E  D  R  D  R  T  L  Q  L  C  F  N  G  F  P  F  I  L  F  H  F  L  S  K  F  H  S  F  V  P  K  *  S  F  L  P  *  P  S  S  T  S  F  P  N  L  C  Y  T  Q  S  H  C  L  E  E  E  C  F  H   : V  M  Q  E  L  T  K  R  L  T  A  P  S  I  L  S  T  Y  L  E  S  T  V  K  Q  F  Q  S  L  M  A  V  I  I  I  F  T  E  I  A  S  P  I  P  L  Y  G  L  Q  D  L  S  I  S  P  A  E  A  V  L  Y  S  P  E  T  K  T  L  P  R  T  G  E  L  A  L  R  R  A  I  P  A  N  T  N  M  K  T  I  Q  :  D  S  L  E  D  I  S  Y  L  L  R  I  P  Q  R  K  P  F  G  T  M  E  G  N  V  K  K  A  L  K  :  I  A  T  D  E  K  A  S  I  L  A  S  I  P  A  E  L  K  E  E  G  S  V  L  Y  T  S  L  V  D  G  K  :  G  G  L  Q  K  L  L  Q  Y  I  K  D  K  D  P  K  K  V  S  V  C  L  A  S  T  L  D  T  I  A  Q  M  E  L  L  Q </second_frame>
            <third_frame>   E  I  G  *  K  D  K  K  R  I  E  I  E  P  Y  N  S  V  S  M  A  S  P  L  S  S  S  I  F  S  P  N  F  T  H  L  Y  Q  N  K  A  F  F  H  S  H  L  P  L  R  S  P  I  Y  A  T  L  N  R  I  A  L  K  K  N  A  S  M  :  S  C  R  N  *  Q  R  G  *  L  L  L  P  F  C  Q  H  I  W  R  V  Q  S  S  N  F  R  V  *  W  R  *  S  L  Y  L  L  K  L  H  L  Q  Y  L  C  M  V  C  K  I  C  P  F  L  L  P  R  Q  C  F  I  P  L  K  Q  K  L  S  L  E  Q  E  N  *  L  L  E  E  L  S  Q  P  T  Q  I  *  K  L  Y  R :   I  R  L  R  T  Y  R  T  C  S  G  F  H  S  E  N  L  L  E  Q  W  R  V  M  *  R  K  L  L  R :   L  Q  Q  M  K  R  H  P  S  W  L  A  F  Q  L  N  *  K  K  R  V  Q  S  C  T  H  L  L  *  T  E  R :   V  D  Y  R  N  F  Y  S  T  *  R  I  K  I  Q  K  K  Y  P  F  V  L  H  L  H  W  I  L  L  H  R  W  S  C  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="28" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="157997" stop="158066"/>
                    <exon start="159295" stop="159563"/>
                    <exon start="159670" stop="159759"/>
                    <exon start="160182" stop="160277"/>
                    <exon start="160764" stop="160871"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>633</number_coding_nucleotides>
                  <number_encoded_amino_acids>211</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSSTSFPNLCYTQSHCLEEECFHVMQELTKRLTAPSILSTYLESTVKQFQSLMAVIIIFTEIASPIPLYGLQDLSISPAEAVLYSPETKTLPRTGELALRRAIPANTNMKTIQDSLEDISYLLRIPQRKPFGTMEGNVKKALKIATDEKASILASIPAELKEEGSVLYTSLVDGKGGLQKLLQYIKDKDPKKVSVCLASTLDTIAQMELLQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="157856" e_stop="158066"/>
            <exon e_start="159303" e_stop="159759"/>
            <exon e_start="160182" e_stop="160234"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.914" e_score="0.891"/>
          <exon-intron don_prob="0.816" acc_prob="0.999" e_score="0.915"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.891">
            <gDNA_exon_boundary e_start="157856" e_stop="158066" e_length="211"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.914">
            <gDNA_intron_boundary i_start="158067" i_stop="159302" i_length="1236"/>
          </intron>
          <exon e_serial="2" e_score="0.915">
            <gDNA_exon_boundary e_start="159303" e_stop="159759" e_length="457"/>
          </exon>
          <intron i_serial="2" don_prob="0.816" acc_prob="0.999">
            <gDNA_intron_boundary i_start="159760" i_stop="160181" i_length="422"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="160182" e_stop="160234" e_length="53"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157856" stop="158066"/>
              <exon start="159303" stop="159536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331901" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="157930" stop="158066"/>
              <exon start="159303" stop="159759"/>
              <exon start="160182" stop="160234"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E486517" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="28" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGAGAGAGATAGGCTAGAAAGATAAAAAGAGGATAGAGATAGAACCTTACAACTCTGTTTCAATGGCTTCCCCTTTATCCTCTTCCATTTTCTCTCCAAATTTCACTCATTTGTACCAAAATAAAGCTTTCTTCCATAGCCATCTTCCACTTCGTTCCCCAATTTATGCTACACTCAATCGCATTGCCTTGAAGAAGAATGCTTCCATG : GAATTGACAAAGAGGCTGACTGCTCCTTCCATTTTGTCAACATATTTGGAGAGTACAGTCAAGCAATTTCAGAGTTTAATGGCGGTGATCATTATATTTACTGAAATTGCATCTCCAATACCTTTGTATGGTTTGCAAGATTTGTCCATTTCTCCTGCCGAGGCAGTGCTTTATTCCCCTGAAACAAAAACTCTCCCTAGAACAGGAGAATTAGCTCTTAGAAGAGCTATCCCAGCCAACACAAATATGAAAACTATACAGGTAGTTTTATTTTGTTCTGCCTATATATTTTATATACTATTTTCCTATTTGGTAGTGTAGATAGTAAGTCATGAAGTATCGCTGTTCCCTGTCTATTTTCTCGCAGGATTCGCTTGAGGACATATCGTACTTGCTCAGGATTCCACAGCGAAAACCTTTTGGAACAATGGAGGGTAATGTGAAGAAAGCTCTTAAG : ATTGCAACAGATGAAAAGGCATCCATCTTGGCTAGCATTCCAGCTGAACTGAA</gDNA_template>
            <first_frame> R  E  R  D  R  L  E  R  *  K  E  D  R  D  R  T  L  Q  L  C  F  N  G  F  P  F  I  L  F  H  F  L  S  K  F  H  S  F  V  P  K  *  S  F  L  P  *  P  S  S  T  S  F  P  N  L  C  Y  T  Q  S  H  C  L  E  E  E  C  F  H   : G  I  D  K  E  A  D  C  S  F  H  F  V  N  I  F  G  E  Y  S  Q  A  I  S  E  F  N  G  G  D  H  Y  I  Y  *  N  C  I  S  N  T  F  V  W  F  A  R  F  V  H  F  S  C  R  G  S  A  L  F  P  *  N  K  N  S  P  *  N  R  R  I  S  S  *  K  S  Y  P  S  Q  H  K  Y  E  N  Y  T  G  S  F  I  L  F  C  L  Y  I  L  Y  T  I  F  L  F  G  S  V  D  S  K  S  *  S  I  A  V  P  C  L  F  S  R  R  I  R  L  R  T  Y  R  T  C  S  G  F  H  S  E  N  L  L  E  Q  W  R  V  M  *  R  K  L  L  R :   L  Q  Q  M  K  R  H  P  S  W  L  A  F  Q  L  N  *  </first_frame>
            <second_frame>  E  R  E  I  G  *  K  D  K  K  R  I  E  I  E  P  Y  N  S  V  S  M  A  S  P  L  S  S  S  I  F  S  P  N  F  T  H  L  Y  Q  N  K  A  F  F  H  S  H  L  P  L  R  S  P  I  Y  A  T  L  N  R  I  A  L  K  K  N  A  S  M  :  E  L  T  K  R  L  T  A  P  S  I  L  S  T  Y  L  E  S  T  V  K  Q  F  Q  S  L  M  A  V  I  I  I  F  T  E  I  A  S  P  I  P  L  Y  G  L  Q  D  L  S  I  S  P  A  E  A  V  L  Y  S  P  E  T  K  T  L  P  R  T  G  E  L  A  L  R  R  A  I  P  A  N  T  N  M  K  T  I  Q  V  V  L  F  C  S  A  Y  I  F  Y  I  L  F  S  Y  L  V  V  *  I  V  S  H  E  V  S  L  F  P  V  Y  F  L  A  G  F  A  *  G  H  I  V  L  A  Q  D  S  T  A  K  T  F  W  N  N  G  G  *  C  E  E  S  S  *   : D  C  N  R  *  K  G  I  H  L  G  *  H  S  S  *  T  E </second_frame>
            <third_frame>   R  E  R  *  A  R  K  I  K  R  G  *  R  *  N  L  T  T  L  F  Q  W  L  P  L  Y  P  L  P  F  S  L  Q  I  S  L  I  C  T  K  I  K  L  S  S  I  A  I  F  H  F  V  P  Q  F  M  L  H  S  I  A  L  P  *  R  R  M  L  P  W :   N  *  Q  R  G  *  L  L  L  P  F  C  Q  H  I  W  R  V  Q  S  S  N  F  R  V  *  W  R  *  S  L  Y  L  L  K  L  H  L  Q  Y  L  C  M  V  C  K  I  C  P  F  L  L  P  R  Q  C  F  I  P  L  K  Q  K  L  S  L  E  Q  E  N  *  L  L  E  E  L  S  Q  P  T  Q  I  *  K  L  Y  R  *  F  Y  F  V  L  P  I  Y  F  I  Y  Y  F  P  I  W  *  C  R  *  *  V  M  K  Y  R  C  S  L  S  I  F  S  Q  D  S  L  E  D  I  S  Y  L  L  R  I  P  Q  R  K  P  F  G  T  M  E  G  N  V  K  K  A  L  K  :  I  A  T  D  E  K  A  S  I  L  A  S  I  P  A  E  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0161H10.1" strand="+"/>
                <serials PGL_serial="28" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="157875" stop="158066"/>
                    <exon start="159303" stop="159623"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>510</number_coding_nucleotides>
                  <number_encoded_amino_acids>170</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KDKKRIEIEPYNSVSMASPLSSSIFSPNFTHLYQNKAFFHSHLPLRSPIYATLNRIALKKNASMELTKRLTAPSILSTYLESTVKQFQSLMAVIIIFTEIASPIPLYGLQDLSISPAEAVLYSPETKTLPRTGELALRRAIPANTNMKTIQVVLFCSAYIFYILFSYLVV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 852 chains have been computed
$ 
$ memory statistics:
$ 2464088 bytes spliced alignments in total
$ 309 spliced alignments have been stored
$ 7974 bytes was the average size of a spliced alignment
$ 45504 bytes predicted gene locations in total
$ 28 predicted gene locations have been stored
$ 1625 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 1015 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-10 21:21:56
-->
