<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-04-08 16:12:55"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E389519" ref_strand="-" ref_description="SGN-E389519 [TUS-4-E17]">
      <seq>tggatgaagatactgagaatctgtcacatcaaaaggtacctactgaactgaagaaagcgattatgcaagctcgacaggataagaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtgtgtgtgtgtgtgtgaaccttttgaacgtctacatcgtttgggttctaagtgtggtcatgtacatgagccttttgaatgttttctttagccagtaaggtggttcttgtgtctggattcgggacgttactttcgttgttaaaactgaatgtttttcctgtcgaaaatggatgtgcttgctcttgctagatgtttaaggattgcaattaggacaattcagcaaatttgattatccagacatcttaatcttaatgaacatgattgttcacaagatataaagtttattttgccataccaacgtcctttgcatttaggaattgttaagttactaattcagattaaaagatgagaattggttaatgaccttaaaatagatcagttacattatgtaattgtatttctttttgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12765" stop="11002"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12465" g_stop="12439" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="110" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11858" g_stop="11302" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="667" r_length="557" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E389519" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>667</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389519" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="12465" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11302"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAGATGTTTAAGGATTGCAATTAGGACAATTCAGCAAATTTGATTATCCAGACATCTTAATCTTAATGAACATGATTGTTCACAAGATATAAAGTTTATTTTGCCATACCAACGTCCTTTGCATTTAGGAATTGTTAAGTTACTAATTCAGATTAAAAGATGAGAATTGGTTAATGACCTTAAAATAGATCAGTTACATTATGTAATTGTATTTCTTTTTGT</genome_strand>
        <mrna_strand>TGGATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAGATGTTTAAGGATTGCAATTAGGACAATTCAGCAAATTTGATTATCCAGACATCTTAATCTTAATGAACATGATTGTTCACAAGATATAAAGTTTATTTTGCCATACCAACGTCCTTTGCATTTAGGAATTGTTAAGTTACTAATTCAGATTAAAAGATGAGAATTGGTTAATGACCTTAAAATAGATCAGTTACATTATGTAATTGTATTTCTTTTTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E711673" ref_strand="+" ref_description="SGN-E711673 [FB02CF05]">
      <seq>ccgtttgagtctagtagcacaacgttgaacacgagaaagctgcatgaagatactgagaatctgtcacatcaaaaggtacctactgaactgaagaaagcgattatgcaagctcgacaggataagaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtgtgtgtgtgtgtgtgaaccttttgaacgtctacatcgtttgggttctaagtgtggtcatgtacatgagccttttgaatgttttctttagccagtaaggtggttcttgtgtctggattcgggacgttactttcgttgttaaaactgaatgtttttcctgtcgaaaatggatgtgcttgctcttgctagaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="12800" stop="11220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12505" g_stop="12439" g_length="67"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="67" r_length="67" r_score="0.896"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="68" r_stop="150" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="11858" g_stop="11510" g_length="349"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="499" r_length="349" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E711673" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E711673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12505" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11510"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAGATGTTTAAGGA</genome_strand>
        <mrna_strand>CCGTTTGAGTCTAGTAGCACAACGTTGAACACGAGAAAGCTGCATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E746567" ref_strand="-" ref_description="SGN-E746567 [GI|47104183]">
      <seq>caaaaaaaaaaaagatggccggattgtcacaagattgggagccggtggtgattcgcaagaaagcgccgaccgccgccgcacggaaagatgagaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcagaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgagaaagctggatgaagatactgagaatctgtcacatcaaaaggtacctactgaactgaagaaagcgattatgcaagctcgacaggataagaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtgtgtgtgtgtgtgtgaaccttttgaacgtctacatcgtttgggttctaagtgtggtcatgtacatgagccttttgaatgttttctttagccagtaaggtggttcttgtgtctggattcgggacgttactttcgttgttaaaactgaatgtttttcctgtcgaaaatggatgtgcttgctcttgctaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14146" stop="11220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13846" g_stop="13700" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="147" r_length="147" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="148" r_stop="231" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="314" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11520" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="315" r_stop="653" r_length="339" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E746567" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>653</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E746567" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="13846" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAGA</genome_strand>
        <mrna_strand>CAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E717001" ref_strand="+" ref_description="SGN-E717001 [FB18CF05]">
      <seq>tgataaggagatatttttcaaaaaaaaaaaagatggccggattgtcacaaaattgggagccgggggtgattcccaagaaagcgccgaccgccgccgcacggaaagatgaaaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcaaaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgaaaaagctggatgaaaatactgaaaatctgtcacatcaaaaggtacctactgaactgaaaaaagcgattatgcaagctcgacaggataaaaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtgtgtgtgtgtgtgcaaaccttttaaacgtctacatcgtttgggttctaagggtggtcatgtacatgagccttttgaatgttctctttactaagtaagggggttcttgtgtctggattcgggacgttactttcgttgttaaaactgaatgtttttcctgtcaaaaatggatgtgcttgctcttgctaaaaaaaaaaaaaaaaaaaaattcttggggggggggccgggaccccatttccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14164" stop="11220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13864" g_stop="13700" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="249" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="332" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11521" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="670" r_length="338" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="671" polyA_stop="690"/>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E717001" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="0.929" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E717001" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13864" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAG</genome_strand>
        <mrna_strand>TGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAAATTGGGAGCCGGGGGTGATTCCCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAAAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAAAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAAAAAGCTGGATGAAAATACTGAAAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAAAAAGCGATTATGCAAGCTCGACAGGATAAAAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGCAAACCTTTTAAACGTCTACATCGTTTGGGTTCTAAGGGTGGTCATGTACATGAGCCTTTTGAATGTTCTCTTTACTAAGTAAGGGGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCAAAAATGGATGTGCTTGCTCTTGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E716994" ref_strand="+" ref_description="SGN-E716994 [FB18CE10]">
      <seq>tgataaggagatatttttcaaaaaaaaaaaagatggccggattgtcacaaaattgggagccggtggtgattcgcaagaaagcgccgaccgccgccgcacggaaagatgaaaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcaaaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgaaaaagctggatgaaaatactgaaaatctgtcacatcaaaaggtacctactgaactgaaaaaagcgattatgcaagctcgacaggataaaaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatctttcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtgtgtgtgtgtgtgtaaaccttttgaacgtctacatcgtttgggttctaagtgtggtcatgtacatgagccttttgaatgttttctttacccagaaagggggttcttgtgtctggattcgggacgttactttcgttgttaaaactgaatgtttttcctgtcaaaaatggatgtgcttgctcttgctaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14164" stop="11220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13864" g_stop="13700" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="249" r_length="84" r_score="0.964"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="332" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11521" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="670" r_length="338" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="671" polyA_stop="683"/>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E716994" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E716994" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13864" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11521"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAG</genome_strand>
        <mrna_strand>TGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAAATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAAAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAAAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAAAAAGCTGGATGAAAATACTGAAAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAAAAAGCGATTATGCAAGCTCGACAGGATAAAAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCTTTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTAAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTACCCAGAAAGGGGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCAAAAATGGATGTGCTTGCTCTTGCTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E714665" ref_strand="+" ref_description="SGN-E714665 [FB12AD06]">
      <seq>ttcaaaaaaaaaaaagatggccggattgtcacaagattgggagccgggggtgattcgcaagaaagcgccgaccgccgccgcacggaaagatgaaaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcaaaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgaaaaagctggatgaagatactgaaaatctgtcacatcaaaaggtacctactgaactgaaaaaagcgattatgcaagctcgacaggataaaaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatctttcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtgtgtgtgtgtgtgtaaaccttttgaacgtctacatcgtttgggttctaagtggggtcatgtacatgacccttttgaatgttttctttacccagtaaggtggttcttgtgtctggattcgggacgttactttcgttgttaaaactgaatgtttttcctgtcgaaaaaaaaaaaaaaaaaaaaaaaaaaaattctttggggggggggccgggacccctttccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14148" stop="11243"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13848" g_stop="13700" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="233" r_length="84" r_score="0.976"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="316" r_length="83" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11544" g_length="315"/>
          <reference_exon_boundary r_type="cDNA" r_start="317" r_stop="631" r_length="315" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="640" polyA_stop="657"/>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E714665" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>631</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E714665" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13848" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAA</genome_strand>
        <mrna_strand>TTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGGGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAAAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAAAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAAAAAGCTGGATGAAGATACTGAAAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAAAAAGCGATTATGCAAGCTCGACAGGATAAAAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCTTTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTAAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGGGGTCATGTACATGACCCTTTTGAATGTTTTCTTTACCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E389781" ref_strand="+" ref_description="SGN-E389781 [TUS-4-E17]">
      <seq>taagcagtgataaggagatatttttcaaaaaaaaaaagatggccggattgtcacaagattgggagccggtggtgattcgcaagaaagcgccgaccgccgccgcacggaaagatgagaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcagaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgagaaagctggatgaagatactgagaatctgtcacatcaaaaggtacctactgaactgaagaaagcgattatgcaagctcgacaggataagaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtgtgtgtgtgtgtgtaaaccttttgaacgtctacatcgtttgggttctaagtgtggtcatgtacatgagccttttgaatgttttctttagccagtaaggtggttcttgtgtctggattcgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14170" stop="11288"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13871" g_stop="13700" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="255" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="256" r_stop="338" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11588" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="609" r_length="271" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E389781" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E389781" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13871" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCAGTGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGG</genome_strand>
        <mrna_strand>TAAGCAGTGATAAGGAGATATTTTTCAAAAAAAAAAA-GATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTAAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E248206" ref_strand="+" ref_description="SGN-E248206 [cLEF-55-O2]">
      <seq>atggccggattgtcacaagattgggagggggtggtgattcgcaagaaagcgcctaccgccgccgcacggaaagatgagaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcagaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgagaaagctggatgaagatactgagaatctgtcacatcaaaaggttcctactagaactgaataaagcaatctttcaagattaccccgataagacacttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtgtgtgtgtgtgtgtgaaccttttgaacgtctacatcgtttgggttctaagtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14132" stop="11356"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13832" g_stop="13700" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="133" r_length="133" r_score="0.977"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="134" r_stop="217" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.73"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="301" r_length="84" r_score="0.807"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="0.78"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11656" g_length="203"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="504" r_length="203" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E248206" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>503</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E248206" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13832" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11656"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACT-GAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTG</genome_strand>
        <mrna_strand>ATGGCCGGATTGTCACAAGATTGGGAGGGGGTGGTGATTCGCAAGAAAGCGCCTACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTTCCTACTAGAACTGAATAAAGCAATCTTTCAAGATTACCCCGATAAGACACTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E336549" ref_strand="+" ref_description="SGN-E336549 [cTOE-4-E15]">
      <seq>tttttcaaaaaaaaaaaagatggccggattgtcacaagattgggagccggtggtgattcgcaagaaagcgccgaccgccgccgcacggaaagatgagaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcagaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgagaaagctggatgaagatactgagaatctgtcacatcaaaaggtacctactgaactgaagaaagcgattatgcaagctcgacaggataagaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14151" stop="11407"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13851" g_stop="13700" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="152" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="153" r_stop="236" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="237" r_stop="319" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11707" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="471" r_length="152" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E336549" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E336549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13851" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11707"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTG</genome_strand>
        <mrna_strand>TTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E291198" ref_strand="+" ref_description="SGN-E291198 [cLET-2-E19]">
      <seq>tcaaaaaaaaaaaagatggccggattgtcacaagattgggagccggtggtgattcgcaagaaagcgccgaccgccgccgcacggaaagatgagaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcagaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgagaaagctggatgaagatactgagaatctgtcacatcaaaaggtacctactgaactgaagaaagcgattatgcaagctcgacaggataagaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaagtgatggtggtggtggtggggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14147" stop="11408"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13847" g_stop="13700" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="148" r_length="148" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="149" r_stop="232" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="315" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11708" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="316" r_stop="466" r_length="151" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E291198" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13847" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11708"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGT</genome_strand>
        <mrna_strand>TCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E227009" ref_strand="+" ref_description="SGN-E227009 [cLED-1-F6]">
      <seq>aaagcagtgataaggagatatttttcaaaaaaaaaaaagatggccggattgtcacaagattgggagccggtggtgattgtcaagaaagcgccgaccgccgccgcacggaaagatgagaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcagaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgagaaagctggatgaagatactgagaatctgtcacatcaaaaggtacctactgaactgaagaaagcgattatgcaagctcgacaggataagaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtgcgaaacttcgtggaaagaaataaactgcaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14171" stop="11430"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13871" g_stop="13700" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="256" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="257" r_stop="339" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11730" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="468" r_length="129" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E227009" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>468</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E227009" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13871" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11730"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGCAGTGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAA</genome_strand>
        <mrna_strand>AAAGCAGTGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTGTCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E296607" ref_strand="+" ref_description="SGN-E296607 [cLET-39-D16]">
      <seq>gttaagcagtgataaggagatatttttcaaaaaaaaaaaagatggccggattgtcacaagattgggagccggtggtgattcgcaagaaagcgccgaccgccgccgcacggaaagatgagaaagcagtcaacgccgcccgtcgagccggtgccgaaatcgaaaccgtcagaaaagctactgctgggtcaaacaaggctgcctctagtagcacaacgttgaacacgagaaagctggatgaagatactgagaatctgtcacatcaaaaggtacctactgaactgaagaaagcgattatgcaagctcgacaggataagaagcttactcagtctcaacttgcccaattgataaacgaaaaaccacagatcattcaagagtatgaatctggaaaggcaattccaaaccaacagataatttctaaactggagagagctcttggtg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="14173" stop="11462"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13873" g_stop="13700" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12522" g_stop="12439" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="258" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12076" g_stop="11994" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="259" r_stop="341" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="11858" g_stop="11762" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="342" r_stop="438" r_length="97" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E296607" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>438</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E296607" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13873" e_stop="13700"/>
          <exon e_start="12522" e_stop="12439"/>
          <exon e_start="12076" e_stop="11994"/>
          <exon e_start="11858" e_stop="11762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAAGCAGTGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAGGTTCATATACAACATGCTCTAATCTTCTTATCTCAGTTTTATTGATTTTCTGAGTAGCTTTTTACGATGAGTTATACTGTATCTGCTCCTTTTTTTTTCATTCCCGATCGGCTTTGCTTGGTACGAATTAGGGCTTTTAATTTTCCGGTCAGTTTAACGGCCAATTTCCCCTTTATCTATGGTTTCCTGTTTACATATAGCTAATTTCATTTCATGCTCAAATTGAATAACTCAACTCCTAATAAAACACTTCTGAATAAAAAATATTTGAATTATTTTTTTTGCACATTAAATTAACTGATTAAAATATACTCACAGCCTCAAGTAGAAAATGTATGTGGTTTTATAGATGTGTATAATCAAGGAAGAAACATATTTTATGTGGTTAGGAAGTTATTAATACACGATTGAGAACACACTGCGAGGCGAGGCGCGAAAGGTTGCTTCATTTAGTAAGATAAGGCAAGATGCAAGGGTGTAGTAGCTGCGCGGAAGCTGTTGCGCCCTTAGTTAATAGCAAAACTTACTCTTCCTGGTTTTGGTTTTATGACGAATAGAAAGTTCAATGTGCAATAGATTTCCTTATTTATAACTTAACTGCTTTTTGTGGTTCGGTCGTTCGGAGTTGCCTGTTAGTATCCTAAAGTCCTATATGAGGAGCATCTTGTATATAGTCTTCTACCAATGAAGCCAAATTCCCCCTTCGTTTTTCTTCTCTATTTTATATTACGAAAGGGAGGCTCCATGTTACTTTTATGTGCATTTTTCTTTTCTGCTTTGTTTGCCAAGAGAGACTAGTAATCTGAATTTTATATTGGTAAAGAGGTCCGGAGTGATATGCACGTCGCTTTGTCATTGCATGTTGATTTCTCTTGATATAACTCAAGTTGGGCAGTCTGGATCGGGAAGGAAATGACTTGTTAATGTTGAAATGGGCCTACTTTTATGTAGAATGATAGTATCTCTTTATCTGGGTTAATACCAATCCTTTTGACATTTCATGAATATTTTTGTCGTAGTTTATATATATTACAGTTTCATATGTTCCATGTTTTGCCAATTGCTAGATGGTGTGAAACTTCATTTTTGGTGTGATATTTTTTTGTTGACATCGATCCTTTAGTTGTGAAAATGAGCAAAATGTTTTACGCTCATGATATCTATTTTCTGAATGCAGCTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCACGTAAGTTTGAGTTGACGTTATAACTGAAAGAGAATCTGTCACGTAAGTTTGAGTTGACATTATAACTAGAAACACTTCTATAGAAACAATGTGTTTATAGAGCGTTTCTGTGCTCTGACCTGTTATACACCGTGATTTGAACTGTGCGCCACTAGCTCTAGGAATTTCTCGGTGATCAAAAGAAGAAGAGCACTTTTTTTCTCTGTGAGTCCAAGTCATGCTTACATCCCAACTTGACAAAGCGTCCTTTTAACGGTTTCTCCATCAGGCAAATACCAATAGGTTTGCCACTGGAAAAAACCCCCAGATGTTTTATCTTTTGCTGATGACATTGGGTGTTAATATCTGTTTTTTGTTCTCAGATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAAGTAACTCTCTCTCTCTCTCTCTCTTACGCGCTTATCTTTTTTGTTATAAATATAGCAATCTACATATAGATAGATTCAAGAGAAAGGCTTAATTCATTGTATCGATATAATTTTGGTAATCCCTTTGTTGCGCAGTTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTG</genome_strand>
        <mrna_strand>GTTAAGCAGTGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCAC..........................................................................................................................................................................................................................................................................................................................................................................ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA.......................................................................................................................................TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E541545" ref_strand="-" ref_description="SGN-E541545 [TUS-62-G8]">
      <seq>aaaaggggagtctttggaggtgttattcttaatatgcatctacattggaaaagacatgaaactgtcaaagtcatatgcaaaccctgcaaacctggtcagattcaagaatatgttgatgaaattgcaagactgagtggtggcattccgattcagataattgcaaatgataccatcgttttttaccgaggaagggaatatgtgcagcctgaaattatgtatcctattgatacactgtcgaagaagagggcgttggaaaaatcaaaatacgagcaatcgctagagtctgtgagacatttcattgccattgctgagaaggaacttgcactctactatagacatgttgccctatatgatgaaccaaatattcagagtgcttactccatccttgatgattcaacaagtacaagtgaaaaacgaaatgatgaaataggagaggagaactattcagcagacgaatctatttccttggatctcgagttaccacaagttgatgattattgctcggatgataaacaatctttaagcgaatttggatttgaggatactgatgaatcaagtagtgatgagttggattctggggaggaggaaactagtaattactgcggtagcatatggggaaattattgaatgttgagacttgaaataatgtggttttaattcttgatctgataaattgagggattggaatagaatagaattttttcaaattctaaatcttctgtttggttatcctgaaattggcacaaaaactagaacttgatttttaattttttaacccaagatagatcatatttcttatgtcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="16786" stop="14072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16486" g_stop="16241" g_length="246"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="246" r_length="246" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16240" i_stop="14932" i_length="1309">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14931" g_stop="14375" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="247" r_stop="803" r_length="557" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="804" polyA_stop="813"/>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E541545" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>803</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541545" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="16486" e_stop="16241"/>
          <exon e_start="14931" e_stop="14375"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGGGAGTCTTTGGAGGTGTTATTCTTAATATGCATCTACATTGGAAAAGACATGAAACTGTCAAAGTCATATGCAAACCCTGCAAACCTGGTCAGATTCAAGAATATGTTGATGAAATTGCAAGACTGAGTGGTGGCATTCCGATTCAGATAATTGCAAATGATACCATCGTTTTTTACCGAGGAAGGGAATATGTGCAGCCTGAAATTATGTATCCTATTGATACACTGTCGAAGAAGAGGGTAAGTTTGTTAGAGCTAATTTTCTATAATAACCAAGTCATTGCTTCTCATCATGCATTCATGCAAAATTCACTTTGTAAAGTCTCAATGTGTATAGCCCTTCTACCATAAACTTCTACTCATCGACACCAACTTCCACAATCATTCTTCTGCGGTTGACGCGCTACTTAGTCTATTTGCGTGGGTCCTACATTTTCTCAATTGACTTGTGCCAAAGATGTATGACATAGGTGTGTGTAGTTCTATGGATAATTTTATTCCTAATATTATCAAAAACTGCATGTACCGATATATGCACATTTTACCCCTATTGTAGCCGAATCCATGTTATGCAACGTATTGTTGACCTGGCTCATAGATGTAGTTAAGTTAATTATTAGGGTAGATCATCTGAAATCCACCTTAACAACCACTCTCCTACCGTTTTGTGACTTGTATTGTTGATTTGGCTCATAGATGTGGCTCAGTTGATAATTAGAGTAGATCATCTGAAATCCACCTCAACAACCACTCCCCTAAGTACCCAAAAGTGTGGCCTAGTGCTTAGTGGTCAATGAAAGTGGGTTGAGAACGATGAGGTCTCAAGTTCAAATCCTAGCATAGACAAAAACACTAGGTGATTTCTTCTCATCTGATCTAGCCTTGGTGGACGGAGTTACTTGATACTTGTTGCTGGTGGAAGGTGAAGTTAGTCGAGGTGCGTGAAAGCTGGCCCAGACACCACAATTATCTAAATAAAAACACTCTACTACCCTCTTGTGGCTTGTGTAATTCGCTCTACCTCACAAAAGAACAAGACCTTTCGTTGCACCTTATATACCCCATTGCACTTTGCAGTTTCGTCTTTTTCCATCGACCTTCTTTACTGCTTCAATCGTCAACATTATAGGAAAAAGATCTGTTGGTTTTTGCGATATGTTTGCACTATTTTAACCATCGATGGCTGTTTAGTTCGAAACTGAAACTAAATGTTATCAGCTTTTCATCATCATTCTTAGGAATATATACCAAAATGTCGTTTATTTCACTTGGAAAGATAACAAAGTATCTATCACTTTGTATTCAACAAAACATAGTAACGATCTTCCTTTTGCAAATGCTTTTGGATATTTAACTTACGATTTTTTCCCTCACAGACCTTTGGTAGTCTCATACGTGTTTCATGCTACTTTTTTTTGGAATCAGTTCACTGCACTGAAGGATTTGACTTGTAATACTGTTTGATTCTGTCATATTTACCTATATCTCTGTTTTATCTACTTCTGCATCAACCATGGTATGAATTACTAATCAAATTCTCTTTCTTCAGGCGTTGGAAAAATCAAAATACGAGCAATCGCTAGAGTCTGTGAGACATTTCATTGCCATTGCTGAGAAGGAACTTGCACTCTACTATAGACATGTTGCCCTATATGATGAACCAAATATTCAGAGTGCTTACTCCATCCTTGATGATTCAACAAGTACAAGTGAAAAACGAAATGATGAAATAGGAGAGGAGAACTATTCAGCAGACGAATCTATTTCCTTGGATCTCGAGTTACCACAAGTTGATGATTATTGCTCGGATGATAAACAATCTTTAAGCGAATTTGGATTTGAGGATACTGATGAATCAAGTAGTGATGAGTTGGATTCTGGGGAGGAGGAAACTAGTAATTACTGCGGTAGCATATGGGGAAATTATTGAATGTTGAGACTTGAAATAATGTGGTTTTAATTCTTGATCTGATAAATTGAGGGATTGGAATAGAATAGAATTTTTTCAAATTCTAAATCTTCTGTTTGGTTATCCTGAAATTGGCACAAAAACTAGAACTTGATTTTTAATTTTTTAACCCAAGATAGATCATATTTCTTATGTCA</genome_strand>
        <mrna_strand>AAAAGGGGAGTCTTTGGAGGTGTTATTCTTAATATGCATCTACATTGGAAAAGACATGAAACTGTCAAAGTCATATGCAAACCCTGCAAACCTGGTCAGATTCAAGAATATGTTGATGAAATTGCAAGACTGAGTGGTGGCATTCCGATTCAGATAATTGCAAATGATACCATCGTTTTTTACCGAGGAAGGGAATATGTGCAGCCTGAAATTATGTATCCTATTGATACACTGTCGAAGAAGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGGAAAAATCAAAATACGAGCAATCGCTAGAGTCTGTGAGACATTTCATTGCCATTGCTGAGAAGGAACTTGCACTCTACTATAGACATGTTGCCCTATATGATGAACCAAATATTCAGAGTGCTTACTCCATCCTTGATGATTCAACAAGTACAAGTGAAAAACGAAATGATGAAATAGGAGAGGAGAACTATTCAGCAGACGAATCTATTTCCTTGGATCTCGAGTTACCACAAGTTGATGATTATTGCTCGGATGATAAACAATCTTTAAGCGAATTTGGATTTGAGGATACTGATGAATCAAGTAGTGATGAGTTGGATTCTGGGGAGGAGGAAACTAGTAATTACTGCGGTAGCATATGGGGAAATTATTGAATGTTGAGACTTGAAATAATGTGGTTTTAATTCTTGATCTGATAAATTGAGGGATTGGAATAGAATAGAATTTTTTCAAATTCTAAATCTTCTGTTTGGTTATCCTGAAATTGGCACAAAAACTAGAACTTGATTTTTAATTTTTTAACCCAAGATAGATCATATTTCTTATGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E419159" ref_strand="-" ref_description="SGN-E419159 [STM-29-G9]">
      <seq>atttcattgtcattgctgagaaggaacttgcactctactatagacatgttgccctatacgatgacccaaataatcggagttcttactccatccttgatgattcaagaagcacaagtgaaaaacgaaatgacgaaataggagaggagagctattcagcaggcgaatctatttcctcggatctcgagttacctcaaattgatgattattgttctgatgacaaacaatctttaagcgaatttgaatttgaggatactgacgaatcaagtagtgatgacttggattctggggaggaggaaactagtaattactgaggtagcatatggggaaatatttgaatattgagacctgaaatgatgtggttttaattcttgatctgataattgagggattggaatagaataggttttttcaaatctaattcttctgtttggttatgctgaaattggcacaaaaactagaacttgatctttaatttgtttaacccaatttcatgagctaattccctttcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="15185" stop="14083"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14885" g_stop="14397" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="487" r_length="487" r_score="0.926"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="509" polyA_stop="522"/>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E419159" ref_strand="-">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419159" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="14885" e_stop="14397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTCATTGCCATTGCTGAGAAGGAACTTGCACTCTACTATAGACATGTTGCCCTATATGATGAACCAAATATTCAGAGTGCTTACTCCATCCTTGATGATTCAACAAGTACAAGTGAAAAACGAAATGATGAAATAGGAGAGGAGAACTATTCAGCAGACGAATCTATTTCCTTGGATCTCGAGTTACCACAAGTTGATGATTATTGCTCGGATGATAAACAATCTTTAAGCGAATTTGGATTTGAGGATACTGATGAATCAAGTAGTGATGAGTTGGATTCTGGGGAGGAGGAAACTAGTAATTACTGCGGTAGCATATGGGGAAATTATTGAATGTTGAGACTTGAAATAATGTGGTTTTAATTCTTGATCTGATAAATTGAGGGATTGGAATAGAATAGAATTTTTTCAAATTCTAAATCTTCTGTTTGGTTATCCTGAAATTGGCACAAAAACTAGAACTTGATTTTTAATTT-TTTAACCCAAG</genome_strand>
        <mrna_strand>ATTTCATTGTCATTGCTGAGAAGGAACTTGCACTCTACTATAGACATGTTGCCCTATACGATGACCCAAATAATCGGAGTTCTTACTCCATCCTTGATGATTCAAGAAGCACAAGTGAAAAACGAAATGACGAAATAGGAGAGGAGAGCTATTCAGCAGGCGAATCTATTTCCTCGGATCTCGAGTTACCTCAAATTGATGATTATTGTTCTGATGACAAACAATCTTTAAGCGAATTTGAATTTGAGGATACTGACGAATCAAGTAGTGATGACTTGGATTCTGGGGAGGAGGAAACTAGTAATTACTGAGGTAGCATATGGGGAAATATTTGAATATTGAGACCTGAAATGATGTGGTTTTAATTCTTGATCTGAT-AATTGAGGGATTGGAATAGAATAG-GTTTTTTCAAA-TCTAATTCTTCTGTTTGGTTATGCTGAAATTGGCACAAAAACTAGAACTTGATCTTTAATTTGTTTAACCCAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E298313" ref_strand="+" ref_description="SGN-E298313 [cLET-41-A10]">
      <seq>tgcaaaggaagagggagaagaagaagagtattgctgccaacaagagagatccgagaagacttggtgttcaggggaagaagaagaagcagaaatttgacactgctgaagaaagaatcaaacagaagattgaaaatgcaaaagtcaaagaagctatgctaattgagagactaaagagatatgaggttaccaaagttcaaggtcccgaggttaagccacattttctcactggtgaagaacgattctatattaaaaagatggcacaaaaaaagtctaattatgtgcctattggcaaaaggggagtctttggaggtgttattcttaatatgcatctacattggaaaagacatgaaactgtcaaagtcatatgcaaaccctgcaaacctggtcagattcaagaatatgttgatgaaattgcaagactgagtggtggcattccgattcagataattgcaaatgataccatcgttttttaccgaggaagggaatatgtgcagcctgaaattatgtatcctattgatacactgtcgaaaaagagggcgttggaaaaatcaaaatacgagcaatcgctagagtctgtgagacatttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="18126" stop="14581"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17826" g_stop="17693" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="134" r_length="134" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17692" i_stop="16643" i_length="1050">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16642" g_stop="16241" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="536" r_length="402" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16240" i_stop="14932" i_length="1309">
            <donor d_prob="0.979" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="14931" g_stop="14881" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="537" r_stop="587" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E298313" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>587</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E298313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17826" e_stop="17693"/>
          <exon e_start="16642" e_stop="16241"/>
          <exon e_start="14931" e_stop="14881"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCAAAGGAAGAGGGAGAAGAAGAAGAGAAAAGCTGCCAACAAGAGAGATCCGAGAAGACTTGGTGTTCAGGGGAAGAAGAAGAAGCAGAAATTTGACACTGCTGAAGAAAGAATCAAACAGAAGATTGAAAATGTGAGATAAAGATTTTTCTTTTTCACTTTTAGGAGCCTATGATTGTTTTTTTTTTTTTTTTGCCCAATAATGCTACTGCTGCTACTGTTATTTTCTCCATTATTCTATATGCGGTTACCTTGGTCGAGGGTCCTTCCGAAACAACCTCTCTACCTACCTTCAGTTAGGGAGATAGGAGTAAGGTTGCATACACACCACCCTCCCTAGACTCTACTAATGGGACTACAACTAAGGATTCATAGTGCCACCCCTAACTTGTTTGAGATTGAAAACAAATACCACCGCAGCTACTGAAACTATGTCTCAGCCCGAATTATTTGGTCTCGACTGTATCATTTCTCAAAATCCATCCCGTTCCGTCTGAACCTGTATGATTGTTATCATTATATTAGCTTAATAATCTGCAATAATATTAAGATGAACTGAATTGAAGCGCTTGGGAGTGAGCTTCAACCTGTTTTCTTCAGTTTGGTTGACAATAAATTAGAAGGAAGCCGGATGAAAATGACAAATTAGACGTATTGATGTGTTCTCTGTTGTTATTGTTAAATTTATTGAGGAACCTTTTATATTACCATTTCTCATTTGGTACTTGGAAATTAAAGTAAGATTAGAGAAGCATCATTGATCCTGCCTTTGTCTTTTTCCTTCTCTTCTTGGCTGTGGTTGTTGGAGCTTAATCTTAGTAGTTATTGCAAAAAAGATCCATCTTGTCTACGATTTCTGTCTTGCAAGACTGGAGAAAAAAAAGAGCCTTTGTGCTTCCGAATTACTTTAAATTTTTGTGTCATCTACTTTAAACCAAGTTACAACAAGTCCTGTATGCGTGGTTACTGCCTCACTGAGACATTGATGCCATTTCGTAGTTAATTTTGTGGCTATCTTAACCTTTTCCTGGTTTAGGGGTGTGAAGCATGTAGTATGGTCTCCCTATATTTATATTTGTAGAAGCTAAGATTTGTTTTGTTTGCATTTTCCATTTACTGCTATACAAAACCTAATGTACTTTTTTATTTCAACAAAAGCTGATATGTGTTGGCTTTGGGTCAGGCAAAAGTCAAAGAAGCTATGCTAATTGAGAGACTAAAGAGATATGAGGTTACCAAAGTTCAAGGTCCCGAGGTTAAGCCACATTTTCTCACTGGTGAAGAACGATTCTATATTAAAAAGATGGCACAAAAAAAGTCTAATTATGTGCCTATTGGCAAAAGGGGAGTCTTTGGAGGTGTTATTCTTAATATGCATCTACATTGGAAAAGACATGAAACTGTCAAAGTCATATGCAAACCCTGCAAACCTGGTCAGATTCAAGAATATGTTGATGAAATTGCAAGACTGAGTGGTGGCATTCCGATTCAGATAATTGCAAATGATACCATCGTTTTTTACCGAGGAAGGGAATATGTGCAGCCTGAAATTATGTATCCTATTGATACACTGTCGAAGAAGAGGGTAAGTTTGTTAGAGCTAATTTTCTATAATAACCAAGTCATTGCTTCTCATCATGCATTCATGCAAAATTCACTTTGTAAAGTCTCAATGTGTATAGCCCTTCTACCATAAACTTCTACTCATCGACACCAACTTCCACAATCATTCTTCTGCGGTTGACGCGCTACTTAGTCTATTTGCGTGGGTCCTACATTTTCTCAATTGACTTGTGCCAAAGATGTATGACATAGGTGTGTGTAGTTCTATGGATAATTTTATTCCTAATATTATCAAAAACTGCATGTACCGATATATGCACATTTTACCCCTATTGTAGCCGAATCCATGTTATGCAACGTATTGTTGACCTGGCTCATAGATGTAGTTAAGTTAATTATTAGGGTAGATCATCTGAAATCCACCTTAACAACCACTCTCCTACCGTTTTGTGACTTGTATTGTTGATTTGGCTCATAGATGTGGCTCAGTTGATAATTAGAGTAGATCATCTGAAATCCACCTCAACAACCACTCCCCTAAGTACCCAAAAGTGTGGCCTAGTGCTTAGTGGTCAATGAAAGTGGGTTGAGAACGATGAGGTCTCAAGTTCAAATCCTAGCATAGACAAAAACACTAGGTGATTTCTTCTCATCTGATCTAGCCTTGGTGGACGGAGTTACTTGATACTTGTTGCTGGTGGAAGGTGAAGTTAGTCGAGGTGCGTGAAAGCTGGCCCAGACACCACAATTATCTAAATAAAAACACTCTACTACCCTCTTGTGGCTTGTGTAATTCGCTCTACCTCACAAAAGAACAAGACCTTTCGTTGCACCTTATATACCCCATTGCACTTTGCAGTTTCGTCTTTTTCCATCGACCTTCTTTACTGCTTCAATCGTCAACATTATAGGAAAAAGATCTGTTGGTTTTTGCGATATGTTTGCACTATTTTAACCATCGATGGCTGTTTAGTTCGAAACTGAAACTAAATGTTATCAGCTTTTCATCATCATTCTTAGGAATATATACCAAAATGTCGTTTATTTCACTTGGAAAGATAACAAAGTATCTATCACTTTGTATTCAACAAAACATAGTAACGATCTTCCTTTTGCAAATGCTTTTGGATATTTAACTTACGATTTTTTCCCTCACAGACCTTTGGTAGTCTCATACGTGTTTCATGCTACTTTTTTTTGGAATCAGTTCACTGCACTGAAGGATTTGACTTGTAATACTGTTTGATTCTGTCATATTTACCTATATCTCTGTTTTATCTACTTCTGCATCAACCATGGTATGAATTACTAATCAAATTCTCTTTCTTCAGGCGTTGGAAAAATCAAAATACGAGCAATCGCTAGAGTCTGTGAGACATTTC</genome_strand>
        <mrna_strand>TGCAAAGGAAGAGGGAGAAGAAGAAGAGTATTGCTGCCAACAAGAGAGATCCGAGAAGACTTGGTGTTCAGGGGAAGAAGAAGAAGCAGAAATTTGACACTGCTGAAGAAAGAATCAAACAGAAGATTGAAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGTCAAAGAAGCTATGCTAATTGAGAGACTAAAGAGATATGAGGTTACCAAAGTTCAAGGTCCCGAGGTTAAGCCACATTTTCTCACTGGTGAAGAACGATTCTATATTAAAAAGATGGCACAAAAAAAGTCTAATTATGTGCCTATTGGCAAAAGGGGAGTCTTTGGAGGTGTTATTCTTAATATGCATCTACATTGGAAAAGACATGAAACTGTCAAAGTCATATGCAAACCCTGCAAACCTGGTCAGATTCAAGAATATGTTGATGAAATTGCAAGACTGAGTGGTGGCATTCCGATTCAGATAATTGCAAATGATACCATCGTTTTTTACCGAGGAAGGGAATATGTGCAGCCTGAAATTATGTATCCTATTGATACACTGTCGAAAAAGAGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGGAAAAATCAAAATACGAGCAATCGCTAGAGTCTGTGAGACATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E541547" ref_strand="+" ref_description="SGN-E541547 [TUS-62-G8]">
      <seq>ctgcaaaggaagagggagaagaagaagagaaaagctgccaacaagagagatccgagaagacttggtgttcaggggaagaagaagaagcagaaatttgacactgctgaagaaagaatcaaacagaagattgaaaatgcaaaagtcaaagaagctatgctaattgagagactaaagagatatgaggttaccaaagttcaaggtcccgaggttaagccacattttctcactggtgaagaacgattctatattaaaaagatggcacaaaagaagtctaattatgtgcctattgggcaaaaggggagtctttggaggtgtta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="18127" stop="16162"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17827" g_stop="17693" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17692" i_stop="16643" i_length="1050">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16642" g_stop="16462" g_length="181"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="317" r_length="182" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E541547" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>316</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E541547" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17827" e_stop="17693"/>
          <exon e_start="16642" e_stop="16462"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCAAAGGAAGAGGGAGAAGAAGAAGAGAAAAGCTGCCAACAAGAGAGATCCGAGAAGACTTGGTGTTCAGGGGAAGAAGAAGAAGCAGAAATTTGACACTGCTGAAGAAAGAATCAAACAGAAGATTGAAAATGTGAGATAAAGATTTTTCTTTTTCACTTTTAGGAGCCTATGATTGTTTTTTTTTTTTTTTTGCCCAATAATGCTACTGCTGCTACTGTTATTTTCTCCATTATTCTATATGCGGTTACCTTGGTCGAGGGTCCTTCCGAAACAACCTCTCTACCTACCTTCAGTTAGGGAGATAGGAGTAAGGTTGCATACACACCACCCTCCCTAGACTCTACTAATGGGACTACAACTAAGGATTCATAGTGCCACCCCTAACTTGTTTGAGATTGAAAACAAATACCACCGCAGCTACTGAAACTATGTCTCAGCCCGAATTATTTGGTCTCGACTGTATCATTTCTCAAAATCCATCCCGTTCCGTCTGAACCTGTATGATTGTTATCATTATATTAGCTTAATAATCTGCAATAATATTAAGATGAACTGAATTGAAGCGCTTGGGAGTGAGCTTCAACCTGTTTTCTTCAGTTTGGTTGACAATAAATTAGAAGGAAGCCGGATGAAAATGACAAATTAGACGTATTGATGTGTTCTCTGTTGTTATTGTTAAATTTATTGAGGAACCTTTTATATTACCATTTCTCATTTGGTACTTGGAAATTAAAGTAAGATTAGAGAAGCATCATTGATCCTGCCTTTGTCTTTTTCCTTCTCTTCTTGGCTGTGGTTGTTGGAGCTTAATCTTAGTAGTTATTGCAAAAAAGATCCATCTTGTCTACGATTTCTGTCTTGCAAGACTGGAGAAAAAAAAGAGCCTTTGTGCTTCCGAATTACTTTAAATTTTTGTGTCATCTACTTTAAACCAAGTTACAACAAGTCCTGTATGCGTGGTTACTGCCTCACTGAGACATTGATGCCATTTCGTAGTTAATTTTGTGGCTATCTTAACCTTTTCCTGGTTTAGGGGTGTGAAGCATGTAGTATGGTCTCCCTATATTTATATTTGTAGAAGCTAAGATTTGTTTTGTTTGCATTTTCCATTTACTGCTATACAAAACCTAATGTACTTTTTTATTTCAACAAAAGCTGATATGTGTTGGCTTTGGGTCAGGCAAAAGTCAAAGAAGCTATGCTAATTGAGAGACTAAAGAGATATGAGGTTACCAAAGTTCAAGGTCCCGAGGTTAAGCCACATTTTCTCACTGGTGAAGAACGATTCTATATTAAAAAGATGGCACAAAAAAAGTCTAATTATGTGCCTATT-GGCAAAAGGGGAGTCTTTGGAGGTGTTA</genome_strand>
        <mrna_strand>CTGCAAAGGAAGAGGGAGAAGAAGAAGAGAAAAGCTGCCAACAAGAGAGATCCGAGAAGACTTGGTGTTCAGGGGAAGAAGAAGAAGCAGAAATTTGACACTGCTGAAGAAAGAATCAAACAGAAGATTGAAAAT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCAAAAGTCAAAGAAGCTATGCTAATTGAGAGACTAAAGAGATATGAGGTTACCAAAGTTCAAGGTCCCGAGGTTAAGCCACATTTTCTCACTGGTGAAGAACGATTCTATATTAAAAAGATGGCACAAAAGAAGTCTAATTATGTGCCTATTGGGCAAAAGGGGAGTCTTTGGAGGTGTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E209835" ref_strand="+" ref_description="SGN-E209835 [cLEC-52-G1]">
      <seq>atttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtactccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgtggagacacggcaatatcttggcgatcaatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19454" stop="18227"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19154" g_stop="18527" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E209835" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209835" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19154" e_stop="18527"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGAACTCGTAAAGTGCTTTTAGAAGCTGTTGAGTGTCTGAAAAGAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGATGGTAAGATCTCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTAGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAACTCGATCACAAACATGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATG</genome_strand>
        <mrna_strand>ATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E299938" ref_strand="+" ref_description="SGN-E299938 [cLEW-11-G21]">
      <seq>ctcgtgcccgtttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtaccccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaaccacactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatcccgcataaagcccgatcacaaacaggctatttgtttacatgtggaga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19396" stop="18252"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19104" g_stop="18552" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="554" r_length="554" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E299938" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E299938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19104" e_stop="18552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAAGTGCTTTTAGAAGCTGTTGAGTGTCTGAAAAGAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGATGGTAAGATCTCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTAGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGAT-CCGCATAAAACTCGATCACAAACATGCTATTTGTTTACATGTGGAGA</genome_strand>
        <mrna_strand>CTCGTGCCCGTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACCCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACCACACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGTGGAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E205887" ref_strand="+" ref_description="SGN-E205887 [cLEC-20-D8]">
      <seq>cgatttgtccctgcatttttattaaacggtcggggtctgaatttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtacgccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaacactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatccaaatcagaactgattggttacgcagatgcagggtatttatcagatccgcataaagcccgatcacaaacaggctatttgtttacatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19494" stop="18257"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19194" g_stop="18557" g_length="638"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="638" r_length="638" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E205887" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>638</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205887" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19194" e_stop="18557"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGATTTGTCCCTGCATTTTCATTAAACGGTTGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGAACTCGTAAAGTGCTTTTAGAAGCTGTTGAGTGTCTGAAAAGAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGATGGTAAGATCTCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTAGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAACTCGATCACAAACATGCTATTTGTTTACATGT</genome_strand>
        <mrna_strand>CGATTTGTCCCTGCATTTTTATTAAACGGTCGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACGCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAACACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAGCCCGATCACAAACAGGCTATTTGTTTACATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E209830" ref_strand="+" ref_description="SGN-E209830 [cLEC-52-E1]">
      <seq>atttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttgaaatgaaagatctcggcaagacaaaattttgtcttggcctacagattgagaatttgtcaaatggaatacttgttcatcaatcaacgtacacagaaaagatactaaagcgtttttacatggataactcacatccattgagtactccaatggtggtaagatcgcttgacatcaatacagatccatttcgacctcaagagaatgatgaagagcttcttggtgatgaaactccttatcttagtgcgatcggggcactaatgtaccttgctaacaatactcgaccagatatctgttttgcagtaagtctactggcaagattcagttcctccccaacaaaaagacattggaatggtgttaaacacatacttcgatatcttcgagggaccatggacatgggtttattctattccaatgaatgcaaatcagaactgattggttacgcagatgcaaggtatttatcagatccgcataaagcccgatcaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="19454" stop="18279"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19154" g_stop="18579" g_length="576"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="576" r_length="576" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E209830" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E209830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19154" e_stop="18579"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGAACTCGTAAAGTGCTTTTAGAAGCTGTTGAGTGTCTGAAAAGAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGATGGTAAGATCTCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTAGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAACTCGATCACA</genome_strand>
        <mrna_strand>ATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGCCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGGTGGTAAGATCGCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTCGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATGCAAATCAGAACTGATTGGTTACGCAGATGCAAGGTATTTATCAGATCCGCATAAAGCCCGATCACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E331947" ref_strand="+" ref_description="SGN-E331947 [cTOD-16-G12]">
      <seq>aaataatgcaacaatatgaagattttgagccaaaatctgttcacgaatgtagacagagaaatgattggccaaaatggaaggatgcaattcaagctgaattggcttcactagaaatacgtgaagtttttggaccgataatccgaacacctgaaggtatcaagccagtggggtacaaatgggtttttgtacggaaaagaaatgagaaagatgaagtcatgagatataaggcccgactcgttgctcaaggtttttctcaaagacctggcattgattatatggagacatattctccagtggtagatgcaatcaccttcagatatctcataaatttggcagttcatgaaaaacttgaaatgcgtctaatggacgttgtcacagcctatctatatggctcattggaccacaacattttcatgaaaattcctgaagcattcaaagttcctgaagcatacaaagattcaagagaaacttgttcaataaaacttcagaaatctctgtatggattgaaacaatcaggaaggatgtggtacaatcgtctgagtgaatatttgttaaagaaagggtacaaaaatgacccgatttgtccctgcatttttattaaacggtcggggtctgaatttgtaataatagctgtgtatgttgatgatttgaacatcattggcactggtaaagagcttttagaagctattgagtgtctgaaaaaagaatttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="20070" stop="18760"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19770" g_stop="19060" g_length="711"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="711" r_length="711" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E331947" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E331947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19770" e_stop="19060"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAATGCAACAAGATGAAGATTTTGAGCCAAAATCTGTTCACGAATGTAGACAGAGAAATGATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAAAACGTGAAGTTTTTGGACCAATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGGTTTTTGTACGAAAAAGAAATGAGAAAGGTGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACTTGGCATTGATTATATGGAGACATATTCTCCAGTGGTAGATGCAATCACCTTTAGATATCTCATAAATCTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACAGCCTATCTATATGGCTCATTGGACCACAACATTTTCATGAAAATTCCTGAAGCATTTAAAGTGCCTGAAACATACAAAGATTCAAGAGAAACTTGTTCAATAAAGCTTCAGAAATCTCTGTATGGACTGAAACAATCAGGAAGGATGTGGTACAATCGTTTGAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGCATTTTCATTAAACGGTTGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGAACTCGTAAAGTGCTTTTAGAAGCTGTTGAGTGTCTGAAAAGAGAATTTG</genome_strand>
        <mrna_strand>AAATAATGCAACAATATGAAGATTTTGAGCCAAAATCTGTTCACGAATGTAGACAGAGAAATGATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAATACGTGAAGTTTTTGGACCGATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGGTTTTTGTACGGAAAAGAAATGAGAAAGATGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACCTGGCATTGATTATATGGAGACATATTCTCCAGTGGTAGATGCAATCACCTTCAGATATCTCATAAATTTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACAGCCTATCTATATGGCTCATTGGACCACAACATTTTCATGAAAATTCCTGAAGCATTCAAAGTTCCTGAAGCATACAAAGATTCAAGAGAAACTTGTTCAATAAAACTTCAGAAATCTCTGTATGGATTGAAACAATCAGGAAGGATGTGGTACAATCGTCTGAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGCATTTTTATTAAACGGTCGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGCACTGGTAAAGAGCTTTTAGAAGCTATTGAGTGTCTGAAAAAAGAATTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E206250" ref_strand="+" ref_description="SGN-E206250 [cLEC-29-L2]">
      <seq>acgaatttgctacttgcatagaaatctccaattgtcagttggattcaagatgagtaatggagatgtatacctttttcatagtgctactacacatacaatattaaaagaaaagaaaagaaatacttttctaatttggttatgaaaatgacatatgtcaacacaatatcaggtagtacaaaattaattgagagctctggaagagcgaccttattacaacctggagagacaatattggacatttgtaatgcattataccgtagtaagtcacaaagaaacttattaagtttcagagtaattcgccaaaatggctatcacgttgagacgactaatgaaggaaaggatgaatgcctttacattactacaattaatgtacagaagaaaattgtgcatgaaaaattacgtgcattttcttctaggttctactatacaagtgtaagtacagttgaatcacatgtcgtagtaaacaaaaggtttactaattttaatgattctattatttggtatgaccggttgggccatcccggatttaatatgatgcacagaatcattgagaattcacgtgggcacacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="21929" stop="20780"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21625" g_stop="21080" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="572" r_length="551" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E206250" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E206250" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21625" e_stop="21080"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCCCCAGTTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATGCTTTCTTGATAGTGCTACAACGCATACAATATTAAAAGAAAAG--AA-ATAT--TTTTCTAATTTGGTTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGTATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</genome_strand>
        <mrna_strand>AAATCTCCAATTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATACCTTTTTCATAGTGCTACTACACATACAATATTAAAAGAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGAGCTCTGGAAGAGCGACCTTATTACAACCTGGAGAGACAATATTGGACATTTGTAATGCATTATACCGTAGTAAGTCACAAAGAAACTTATTAAGTTTCAGAGTAATTCGCCAAAATGGCTATCACGTTGAGACGACTAATGAAGGAAAGGATGAATGCCTTTACATTACTACAATTAATGTACAGAAGAAAATTGTGCATGAAAAATTACGTGCATTTTCTTCTAGGTTCTACTATACAAGTGTAAGTACAGTTGAATCACATGTCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTCTATTATTTGGTATGACCGGTTGGGCCATCCCGGATTTAATATGATGCACAGAATCATTGAGAATTCACGTGGGCACACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E332350" ref_strand="+" ref_description="SGN-E332350 [cTOD-17-L10]">
      <seq>ttttctaatttggttatgaaaatggcatatgtcaacacaaaattaattgagggctctggaagagcgaccttattactacctggagggacaatattaagcattgataatgcattatattgtagtaagtctcaaagaaacttattaagtttcaaagttattcgccaaaatggctatcatgttgagacggctaatgaaggaaaggttgaatacctttacattactacaattaatgttgagaagaaaattgtgcatgaaaaattacctgcattttcttctgggttgtactatacaagtataagtacagttgaatcacatgccgtagtaaacaaaaggtttactaattttaatgattttatcatttggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="21828" stop="20847"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="21515" g_stop="21147" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E332350" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E332350" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="21515" e_stop="21147"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGTATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</genome_strand>
        <mrna_strand>TTTTCTAATTTGGTTATGAAAATGGCATAT--GTCAACACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E689229" ref_strand="+" ref_description="SGN-E689229 [t3_tus_80_K13]">
      <seq>attttctttcttttagaattctagtaagttcttttctaacaagaattttagtaagttcttttataacacgttatcagcacgaaattgctacttgcaaaggtactatataaatatttttatttaattcacatattctctcataattttcattatgtcgaatttatccaaacttgagtttgtggcattagatatttctggaaagaattatctttcatgggtactcgatgctgagattcacttggctgctaaaggtcttgatgccactattactcagggaaatgaagcatcgagtcaagataaggcgaaggctatgattttccttcgtcatcatcttgatgagggcctgaagattgaatatctgacagtgaaagatccacttgaattgtggactgatttaaaggggagatatgaccacctaaaggcaacagtgttgccaagagctcgttatgagtggatgcatttacggtttcaagattttaagaccgtaattgaatacaactctgctgtattcaggataacctcccagttgaaattatgtggggagactataaaagatgaggacatgttggaaaagacacttactacttttcatgcctcgaatgtgatattgcagcagcaatatcgtgaaaagggttttcagaaatattctgaactaatctcatgtcttttggtggctgagcaacataatgctcttttaatgaaaaatcatgaagctcgtcccactggagctgctccattaccggaggcaaatgcggtggaagcacgtgatcaatctgaagtaaaaagaaatgatcatcggggatataataatgcacggggacgtggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="23229" stop="21859"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="22921" g_stop="22159" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="828" r_length="764" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E689229" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E689229" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="22921" e_stop="22159"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTGATTCACATATTATCTCATAA-TTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGCCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAAATTGAATATTTGACGGTAAAAGATCCACTTGAGTTGTGGACTGACTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCCCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTACAGCAACAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGTGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGGCAA</genome_strand>
        <mrna_strand>AACACGTTATCAGCACGAAATTGCTACTTGCAAAGGTACTATATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACAGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCGAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATCTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGCGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAAATGATCATCGGGGATATAATAATGCACGGGGACGTGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E341676" ref_strand="+" ref_description="SGN-E341676 [cTOF-9-A17]">
      <seq>ttcctttgaacaatttaggaatgccgaaaatggagaaagtgaaaaaggtatcactctttcagtctctcttctctacttcgccagcaaaaagatgctaaaatcgcccttcaactcttccttaatcctaatcccagccatggaagcgacaaaactactaaaccttttcgttattctccactctgttatgatctcatcatctgcaagctcggcagaggtaaactctttcaagaaatggaaaaaatcatcgataaattgagacaggacactcgagtttctctcaacgaagttgttttctgcaatgttatttctttttatggaagagcacatttacctgataaggctcttcatatgtttaatgaaataccctcttttcgctgctatagaagtataaaatctgttaatagcttgttgaatgcacttttagcttgtaaagaatacagcaagattggtgaaatgttaaacaactttgaaaattacgcaaccccagatgtttgtacgtttaatatattgatgaatgcgtgttgtttgtgtggtgatttggggtggtgcacgggaggtgtttgatgaaatgtgtgagagaagaattcagccaaatgtggtgactttggggacgttgattaatgggcttttgtgtgaatcgagaaattaacgaggcgtttaggatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="36440" stop="35179"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36140" g_stop="35479" g_length="662"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="666" r_length="666" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E341676" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>662</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E341676" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36140" e_stop="35479"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCATTTGAACAATTTAGGAATG-CGAAAATGGAGAAAGTGAAAAAGGTATCA-TCTTTCAGTCTCTCTTCTCTACTTCGCCAGCAAAAAGATGCTAAAATCGCCCTTCAACTCTTCCTTAATCCTAATCCCAGCCATGGAAGCGACAAAACTACTAAACCTTTTCGTTATTCTCCACTCTGTTATGATCTCATCATCTGCAAGCTCGGCAGAGGTAAACTCTTTCAAGAAATGGAAAAAATCATCGATAAATTGAGACAGGACACTCGAGTTTCTCTCAACGAAGTTGTTTTCTGCAATGTTATTTCTTTTTATGGAAGAGCACATTTACCTGATAAGGCTCTTCATATGTTTAATGAAATACCCTCTTTTCGCTGCTATAGAAGTATAAAATCTGTTAATAGCTTGTTGAATGCACTTTTAGCTTGTAAAGAATACAGCAAGATTGGTGAAATGTTAAACAACTTTGAAAATTACGCAACCCCAGATGTTTGTACGTTTAATATATTGATGAATGCGTGTTGTTTGTGTGGTGATTT-GGGTGGTGCACGGGAGGTGTTTGATGAAATGTGTGAGAGAGGAATTCAGCCAAATGTGGTGACTTTTGGGACGTTGATTAATGGGC-TTTGTGTGAATCGAGAAATTAACGAGGCGTTTAGGATGA</genome_strand>
        <mrna_strand>TTCCTTTGAACAATTTAGGAATGCCGAAAATGGAGAAAGTGAAAAAGGTATCACTCTTTCAGTCTCTCTTCTCTACTTCGCCAGCAAAAAGATGCTAAAATCGCCCTTCAACTCTTCCTTAATCCTAATCCCAGCCATGGAAGCGACAAAACTACTAAACCTTTTCGTTATTCTCCACTCTGTTATGATCTCATCATCTGCAAGCTCGGCAGAGGTAAACTCTTTCAAGAAATGGAAAAAATCATCGATAAATTGAGACAGGACACTCGAGTTTCTCTCAACGAAGTTGTTTTCTGCAATGTTATTTCTTTTTATGGAAGAGCACATTTACCTGATAAGGCTCTTCATATGTTTAATGAAATACCCTCTTTTCGCTGCTATAGAAGTATAAAATCTGTTAATAGCTTGTTGAATGCACTTTTAGCTTGTAAAGAATACAGCAAGATTGGTGAAATGTTAAACAACTTTGAAAATTACGCAACCCCAGATGTTTGTACGTTTAATATATTGATGAATGCGTGTTGTTTGTGTGGTGATTTGGGGTGGTGCACGGGAGGTGTTTGATGAAATGTGTGAGAGAAGAATTCAGCCAAATGTGGTGACTTTGGGGACGTTGATTAATGGGCTTTTGTGTGAATCGAGAAATTAACGAGGCGTTTAGGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E451735" ref_strand="+" ref_description="SGN-E451735 [cSTS-14-G5]">
      <seq>cgaggcccgcctcttctcttctgcccaaatctgattcccaaaaccttctcaattttgaattcaaaccttgaaccaatcaaagagaaattggtgtaccaaaccaatgagggaagatgaaattgagaggctaagaggtgtggtgagggattgtgtgagtaaacatttgtattcatcagctatcttctttgctgataaagtagctgcaattacttctgacccagctgatatatacatgcaagcacaagctttgtatcttggtcgacactatcgccgggcttttcaccttcttaatgcttctcaaatcgtccttcgtgacctccgcttccgatacctcgccgccaagtgccttgaagagctgaaggagtgggatcaatgtcttctaatgctgggtgatgctaaagtggatgaatatggaaatattactgatacaagagagtgcaacagcatgtacttagacaaggatggtgaagatcgtgaaataaatattttatcagcaatatgctttttgaggggcaaggcttatgaagcgttggagaatcgtgcacaggctcgactatggtataaagctgctatcaaggctgatccctttgtgttatgaggcattggaatgtctgatagagaatcacatgctcacttgtgatgaagagaaaaccctgctctcatgtttgcaatttggtcctgaaaatgggtggctctcttcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="36730" stop="50277"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37023" g_stop="37366" g_length="344"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="349" r_length="349" r_score="0.904"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37367" i_stop="47364" i_length="9998">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47365" g_stop="47499" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="350" r_stop="484" r_length="135" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47500" i_stop="47604" i_length="105">
            <donor d_prob="0.976" d_score="0.96"/>
            <acceptor a_prob="0.908" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47605" g_stop="47678" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="558" r_length="74" r_score="0.973"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47679" i_stop="48668" i_length="990">
            <donor d_prob="0.104" d_score="0.98"/>
            <acceptor a_prob="0.941" a_score="0.95"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48669" g_stop="48708" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="599" r_length="41" r_score="0.950"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48709" i_stop="48983" i_length="275">
            <donor d_prob="0.996" d_score="0.95"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="48984" g_stop="49029" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="600" r_stop="645" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="49030" i_stop="49919" i_length="890">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="49920" g_stop="49977" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="646" r_stop="703" r_length="58" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E451735" ref_strand="+">
        <total_alignment_score>0.926</total_alignment_score>
        <cumulative_length_of_scored_exons>697</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E451735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37023" e_stop="37366"/>
          <exon e_start="47365" e_stop="47499"/>
          <exon e_start="47605" e_stop="47678"/>
          <exon e_start="48669" e_stop="48708"/>
          <exon e_start="48984" e_stop="49029"/>
          <exon e_start="49920" e_stop="49977"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGCCTCCCGCTCTTCTCTTCTCCCCCAAATTCTTCCCCAAAAC-T-CTCAATTTTGAATTCAAAG-TTGAA-CAATCGAAGAGAAATTTGTATA-CAAA-CAATGAGGGAAGAAGAAATTGAGAGGCTAAGAGGTGTTGTGAGGGATTGTGTGAGTAAACATTTGTATTCATCAGCTATCTTCTTTGCTGATAAAGTAGCTGCAATTACTTCTGACCCAGCCGATATATACATGCAAGCACAAGCTTTGTATCTTGGTCGACACTATCGCCGTGCTTTTCACCTTCTTAATGCTTCTCAAATCGTCCTTCGTGACCTCCGCTTCCGATACCTCGCCGCCAAGTGCCTTGTATGCCCTTTTTACTATACAAATAATTGAATAGTTGATTGTTTATTTGTTCCAAGATAATCCGGGTCATTTTGAGGTCTAATTGCTTCCATCTTGTTACAAGATTGTGTCTTTTTGCACTTTTATGAATAAGGTTATATGGGATCTTCATGTTTATGTGTTAATTGAGTAAAAAGGCTACTTATGCATTGTAATTTTATGTTAAGTGGTGATTAACAAAAGTAGGTTTAGGCTCTAGTAGCAAAATGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAACTTATAAGGGTGTATATTTTCCTTGACAGGTTGAATCCTTAATTTTGTTTTTTCCAGGTACCATTTGCCTACTTTGTACATTGGAATGGAATATATGCGTACTCACAGCTTTAAACTGGCTGAGCAGGTGATTATACATTGTCTGTGGTTTCCTATGTTCAACACTTGGTTATGTTAGGTTCTGAGAAAAAATATTCTCTTCTCTGAGTCTGCACAAGTATGTGTGTTCATGCTGGTTGTTCATATCCTGAAGTCTATTGATATTGTCTGGAGTTCCCCGAATAATAGTGCTGATAATGTTCCCCTCTAGTTTTTTATGCAGGCAAAGTCAATATGCCCCTCAGATCCACTTGTATATAATGAACTTGGAGTTGTTGCTTATCATATGAAGGAGTAAGGGTCTCTACTCTTGTGAATTTGCGACATTTATGATTTAGTTGCGTTAACATTTCTCTCATTTATCCTCTAAAAGTGATAAAACATGTATTTTCTGTGTTAATCTCAACCACTTAGCATTTTGAAAATTATGGGTATATTGTTCTGAAGTCTTGTTCAACCTACCATACTCGAGTATCTTGTCCCTTAGTACGAAAAATTCTGTTGATCTTTCTCTTGTTATATTCTTATCCGTTTTACCAAAACTTTATTTAATTTTCTCTCTTTCAGGTATAAGAAAGCAGTGCGGTGGTTTGAGAAAACATTGTCTCACATTCCATCTTCCTTAAGTGAGATGTGGGAATCAACAGTAATCAATCTTGCTCATGCCCTCAGAAAATTAAAGTAAGTGTCTTATGCTAATATTAGTTTTGTGACATACAAGTTGTAGTTTGGTGACCATTTGTTTTCGTTCTCATTAGATCCCAAAAAATAACATAGATAACAAGGTTACATGTCCTCAGGTTTTACTATCGTAGTATTCTTCGATGAGGTTCGTATTTCAAAAAGTTCTTTAAATGATAAGAAGATTTTTCACATATTTATTTCGGTTAGTGTGATAATGAGTTTACCAGCCGGAGAAAGCTGAACAGCTTTACCAGCTGTGTGATTAGTTCTTTCTTTTCTTAGAAAAATTACATGAAATGGAGTTAATATACGGAAGATGCTTTGAATCTCTTGGGAGAACTTTTTAGTCCTTAGGTTACTGATTATATGGCCAATGGTCATTCTTTAGGGAATTAATATTAGGGACATCAAATTTTCCCTGAGGCACCAAACATTGATAGATAGATATATGCAATAAATAAACTTTTAATGCATATTAATTACCCTTTGAACCCATAACTTCAAAAGTAGAATGAGTTAAGTGCTAACCCAACAATTTAAATCTCGGATTCACCTTTGAAAGTAAGTTTGTAAACATTAACATTAAGCAAAACTTTCTTTCAGGAGGTACAACGAGGCAATCGCATATTATGAGAGAGCCCTTGCATTGTCTACAAGAAGTCTAAGTACTTACGCTGGTCTTGCATACACTTATCATCTCCAGGTAATAAATCTCAGATTATATGATGTCCGAAGTAACAAACTTGGCTTTGATATGTTGTTGCAATTATGCAGAACAATTACACATCAGCTATTACATACTATCACAAGGTGTGTTTCCATTTCAAATGTGTAAATACCGCTATTTGGTCTGATTAAATCGATATTGAGTCTGTTCCATTTCCTAAACAGGCGTTGTGGTTCAAACCAGATGATCAATTCTGCACAGAAATGTTAACTTTAGCTCTTGTTGATGAAAGCCGCCATGGAATTGACCCAATAGTTGAATCTCGTTCTGGTGGTCTGTTTATGTAATGCAGAAAATTCTTTGGTAATGTTATTCATCTGTTTTTTTTTTATGATAATTTCTCCAAAAGCTTAGGAAAACAATAAACATATCTTGTTGTATCATAGGCTAGTAGGAGCAGGTGTCGATAAATTTGTATCTACATATACATATCTATAATTTATTTTAGATCATATTAAATCGATACAGGAAAAAAAACCTTTTTTGCTGATGGTGAGTTGATAGAGATTGAAACTTTTTTTTCTATTATCATAATTCATATGAATGCATTTATTGTAATCATATAGGCCGTTTTTTTTTTATTATTATGTATGTTAGGTAAGTATTATTTTGTTTTTATGTAATTCATATGAATGCATTTATTTGTATTCATTTAAGGTTTTCTTAAATTCTGCAATAAAAGTTTGATGACTAGTGAAACGTGCAAACACCAGCTTACTACAATTTGACCCCATCATTAAATATTACTCCAATTTTTATTTTTATTTTTAAAAAAAACTTTTTCGTTTTAAATTTGTTTAAAAAAGAATGATTTTTTTTATAATATTTTAATTTCAATTTTTTTAAATGACATGTTTTAAGTCCGATCATAGGATAATTTGTACATTTGACATAATTTTAATTTACGATTATAAGATTTAAATTTTTTTTATATTTTTAAATTTGTGTCAAGTCAAATTAAATATTCTTTATAATACAGAGGGAGTATCAAAATTTTCATTCAATCCTACTCCATACATTAAAGGTATAAACCAAATTTTCTCTTTTTCTATCTCTTTTGTAGAAAGGTTTTTATTTTCTACCACAAAAATAATGATATTTTAATCGTTGAAAAAATATTTTTAAAGATAAGATTTTTATTTATTAATTTTATAAAATCAAGATATAAGTAATTAAAATTTTCCATTTTGCCCATATTTTTAAATGTTTTTGTAAGTAAAAATATTTCAAAGTTTGTCAATTATTTAATTTGATATTGAAAGATAAAGACACCGAAGTATAATGTATTAAAAAGAGTAATGATTGGAGATGCATTTCATTTTTTTTTTTATTTTTTTTTGAAAGTTCTATGAAGAAATGGAATTTCTCTTAAAAAATTGAAGGAAACTTGAGAATCTTTTTAAGATTAGATTTTTAAATTTTGTGATCACACATATTTAATAATTTAAAGATAAATTATTCAAGTTTCTTTGAAGATTTTATGGTCAAAGCTTAAGAACTTCTCATTCAATTATTTGTCATATACTTCCTCCCCCTATTTACTAGTACAAATGCTTTATCCTACCATCTTCACTTGTTCAGATTTAATTTGACATATTATAAATAAATAAATAAAAATGATAGTTTTATTATTTCACATCTATTAATTACTCTGTAAGTCATTCAAATGCTTTCAAAGTTTCAAAACATGTACCCAAAATTTATTAATGAGGAAAAGAGTCTGAAATATATTCGAATTTTGATCGAAATTGTTATAACAATTTATATTTTGCGCATTACCTTTTACCTCACTACATTATTTAATAGTATATATGTTAAAAATATATGTGTCAACGTGAATATCATAAATCTTATATTATTATAAATAGTAACTTGTCCACGTGAGCTTATATAATGCTTTCATATACATTAATTAGTTAAGATAATCATCCATCTACAATTTCATCTATAAAAAAGGCATAGCCACACAAAGTGGAATTCACAAAAAAAAATAAACTTTTAGAGAGAAAAAAGTATTAAAAACTTAGAAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAGGTTTGTGCATATGTATTTCTTTCGTCCTAATTTACGTGATATTTTTTAGATTTCAAAAGTTAAATAAATATTTACTTAATTACTAATAATCTTTTATATGCCTTATTATTATTTTGAATTGTTAAATATTGTGATTTATAGTCCATCCAGACTATTTTACATCTTGTGTCAAATAATCCTTATTTATTGATCCCAATTTGTTTTTGTTTTGTTTCAATTCATCTCCTTATTTTTTTCAATTAAGGATAAAAATGAAATCTCATAATTAATTATTTCTTAATTTTTTAAAAATGACAATCAATCTTGGATTAAGAAGTAGGAGAAATAAGATAAATTGAAGGGGGTAATATTTTTTTTTTACATAATTTTTAAATACAAAAATTTTAGTATAAATTTTATAGCATTAAAAGCTAATTATTATATTAGAGATTATGAAAAAAAATAATAAGAAGTGTATTTATGTAATTAAAGTAGTAGTATTTATCATCTTTCATGTAAATACAATTTGTTTTGTTTTGTTTTATGATTTTGAAATCAGGTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATGGTAAGACTTGCAAAATACTATTCTATTCAGCAACAGAATAAATAATCTAGGCCAGAAATTTATCTGTTTAAATGTAATTTTCATTATTATGAGATTTAATGAAGTAAAATAAATTATAAATTTAAACACATGTCATGTATGTATTGACTTGGTGTAAACATTCGGGGTGTGTTTGGTATGAAGGAAAATGTTTTATAGGAAACAAGTAGATATTTGATTTATTTTCTCTTGTTTAATTTGTGAGTAGAAAATATTTTTTGAAAAATATTTAGTGTTTGATTTTTGAATAAAATGTTTTTGAGAAATATCTTTTATTTTTTACTAAAGTATAAAATAATTTTTGAAGTTGAAATTAGTTTTTAGAAACAAACTTAAAATTCTTTTTCTTTGTGGGTGGGGGGCTAGTAAGGGATAGTTGTAGGGTGGGGGGAATCTAGGGTAGGGATGAAAAAATAAAATTTGAAGTTTAAAATATGTTTTAAGAACAAATTCAATTTCTTTTTGGGTTGTAGGGGGGACTGGGGTAGTAGGGGTGAGTGGGTGGGGGGTCGGAGAGCACGGGGTAGTTTAAAAATGAATTTTAAAAGTTTGAAAATATTTTTAAAAAACTAACTTTAATTATTTTTTATTGGATGGGGGTGGTAGGGGGATCAACGATGGGTGAAAAAAATAAATTTTGAAGTTAAAAATATTTTTTTTAAAATAAACTTAAGTTTTTTAGAGATAGGGGGGCTGGTAGGGGTGGATGGGTGGGAGGCAGGTAGGAGGGTGGTTTGGGGGTCTGGTAGGATGGGGTTGGGGTTGGAAGAAAGTTTTGAAAAAAGTTTATCTTAAATTTGAGGAAAATAAGTTAATTTGAAAAACATTTTTCAAAATATTTGACCAAATCAAACATGAGAAAATTGAAAAAATATTTTCTTTCATACCAAACACACCTTCGGTGCGGATAAATTTTACCCATAATTTAGCTAAATTGTTCTTTTATTTAATATTTCTTTTAGCAAACGTAAAAGAAAAAATATAACAAATAAAATGAAACCAAAAATTCACATTCTCGGCTGCTTCCGGTCCGATAGGTCGGTCGCCCTCTAGCCAGTGACTAACCCAGCTATGGAGCTAGGTGTATACCGCCACGTCGAGACTCTCATTCAAAAGTGCAAATAAGCAAAGAAAATTCTCCGCTCAAACTAATTTCATATTGGTAATATCAATCAATACTTTTTTATACAAATTTATTCAAATTTATATATGGGGATAATTTTAAAATTATTCAATCATATTGAATTGAATAGTATAATCATTTCTTCATTAAATAAAAGAGTGTACTGATAACATTCTTTTTCCCTCAATGAAATGCCTTCACATCACCACATATATCTTTAATCATATATGTAGTAGGTAGTGATACATATAGGCCCATTATAACCCCACTATGATCATCATGTTCTATAGTATCTATATTCTTAAAATAATATAGTATTTTGTTTACATATTAAACACACAAATGAATTATTTTTTACAAAAATATCTTTTTTTTTTCTTTATTTATATCAATTTTACTTTATGTTTTGCGATGAGATGGGACAGGAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGACATTGGGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAGGTCTCTCTCTATTCCTCTTACATACTTTTACACTATCGTAAAATAATATGCAGATATATCCTCTATCATATTTTTGGGATATTGGTACTTCTGTCGTTCAAGAACTAGAACATATACGTCATTCACTCTAACGGCAGACTAAATAAAAACACGTGGCACAATCTTATTCGTCGATATGATATTTAATAAATGTCAGGTCATTGGATAAAGATTACGACATGTGTATGTCCGTTAGTATAAAAAGTATATATGTTCTACTTTTTGGGCATAAGGGGCATCAATATCTCAAAAGTATGATGGAGGGTATCTGCATAATATTTACCATTTTTTCCTTTTGTTTTTGACAATTTATAAGGTAAATTAAAACGGCATACACATCACTCTTTTCAATTTATTTTGTGGATTACACTAAATATATTGCTACTATTAATTTTATTTCATTTATTACTTTACAAAATAAAAAATATCACTAAATTTGTTTTGCTAGGAAATCCACTTTAAAAATGATACTGTTTGATTTTATTAATAAGAAGAACACAAAAATAATCAAAATGAATTGAGAAATAATATATGTATAAATTTTATAATTACTTATATATTATTCACAATAAAATATAAATATACTGTTAAATTTTAATTAACTTAAAATTTTTATTTTTATCATTTTTTCAAGTGCAATACTTAAATTTTCGAGTATAATGACTTTAGTATTGATTAACTAAATCACTTTGTTCGTATAATAATAATTTTAGTATAGTTTAATTAAATTCATAATAACTTTCTTGTAGATTTTTCGTGTACTAGATGTTTGTGATGTGTATGCCATCTACAAACTTTTACTTTCAAACAAAAAAAAACTAAAAAATTCAAATCAAACCAAATCGACGATTATTTTTTATTTGATTTTAAAAATTCAAAAATCAATAAAATTGATTTTGAAAATGATTAATCTTGAACATTTGACTTTTGTTTTTCTCTCTCTTTATATATATAATTATGAATTTAAATAAATTATTTTCTAAATGTTGACAGGTTGATGAATCACTAAGAGCAGAGGATGTAGAGGTATATTATGATCCAACGGAACTTTTTGGTGAACTACTCAAAGGACCAAAAATTTCTGAATCTAATGTTGAGCACCACTAGTCATGGTTTATTGATTTTATGAAGTTTTTTTTTTTATGTTTTTTCATAAAATAAACTTTCTCTGTTTGGATCGCACAATATTACAATACAATGTTACAAAGTTTGTTTGGATTGATTTATTTGAAGTGTTTAAAATTAAAATAACTTTGAATATTTGAATAAATTAAAAGGTGTTTAAACAGAGAGTTCAATTTTAAAGATCTTGTGCTTATGTTTAACTCTAGGCTTCCTTATTTAAGGAATCCATTAATTTCGGTCACTAGACTTTCCTTCATGTTGTTTTTGGTTTTGAGGTAGTCAGGGGTCATGTTTCGGCGCACTAATGTTTACAATTGAACTAGTAAAGGCTTATTTTAGACTCGTAGAAANTATAATCTCATGAATTTTTTTAAACTTTTTTATTCAGCTNNATGTATTNCAATTTGGTACCAGTTACGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGGGGGGATTTAACAAAAGTAGGGTTTGGGTTTTGGTGGAAAATGGGGAATAACTACCCAAAGAAACTGTTTTGGGTATTTGTTTATTTTTTTTTTGGGGGATCAACAAGTTTAGTGGTGTTCTTTAGCTGTTAAATTAAGTTATACAGCTAAGTTGTTGTGCTTTAACATTGAAAGTGGTGATTCAGCAAAGTAGGTTCAGCCTTATATACGGTTTTTTGTTTTAGTTATCACTAGTAAATGGGACACAAATATTACACAAAGCAGTGTATCTTAAGCTGTTATCGAGCAGTGTGTTGGACTTTATTATGTAAAACTTCATAGATACTTGGAACTTGATTCAGGTGTTAAATTTCAGGGGTTGACATCATTTGCCAGATGCTTGTTAATATATTTAAGATGGTTTGATCATATATCAGTGAGGTTGCTCAAAAATGTGAAGGCTTGATAAACCCTGTCTTTTTGTAGTGTAAACTACTTTTTCCCATCCCAAGTAATGTTTTGGACTTCCATCCCCTATCTATACTATAACCTCAAACCTCTTTCTACTTTCTGTGCACCAAATGTTGATTAGGAGATGAAAGAAGCACACCGTGGAATCAAACCAGTCATTTTCCTTATATGGTGAAAGTTGACAGTGAAGATCTACACTTGAATAAAAAATCTACACTAGAGAGCATACACTTGTTAGAGGTGATCCCCACCTCCCCTTTTCACCTAATCCATTAGTTCACAGCTTCACCACTTTATCTAGGATTGAGCTACCACACTCTTGAAACTCGGTAAAATTGTTTTCATTCAATGAGAATATAAAGAAAAGTAGCAATTCTTATAAAAAAGATAAACTGAACAAGTGGATCAGATTCTGGTTCTATTCTTCTTTGTTTGTCTTCCCTAACTTGAAGTGTTACAGTTGCAACACTGCAGAACACAAAACATTTAACTCAACACATAGTACGTGATAGTATTTCCAGCCTGACAAGTCCCACTAATCTTCTACTGTCATTGAATGCCTGCTTGACGCATTCATAAGCCATGAAACTACTTGCAAACAGGTTTAGTGCTTCACCTTGCTTGGGCAGTGCTTCAGTGCAAACACAAAGGTGTTAGGCGTGTGTCTCAGAGTCCAACTGTCTTAAAGAGAGGGCTAAACAATAAATATTTCACCTAATTGTAATTTTGAAAATAAGTTATATAATTGTTATTTGTGTTTATAGTTATTATTCTTGAACTACTACATATTCTGAATTTTTTTGTTAATTAGAATCCCGTGCTTTGTGTGTAGTGCTTAAAGTTAGACATTTGTGCTTCTTTTCACTTTTTGCCATTGATTACATGGCTGCCTACTTGGGCAAGGTGCTACCATTTGAATGTAGGTTGCCGTCTTTCCACTTTCAGTTATCAACATGTCACATCCCTAAGTATGATTATGGTTAGGTTTTAATCTGTAGTATCTGTCCCTTGATTGAAGCCTCAATCCCTAAATAATTGGGATTAACTATAAGTGCTAGTTGGATCCATATTTTCTTCTTCTTCTATATATGTGATCTCAAGAACAGGTCATCATAATCTTGCACTTACCCCTACACTAACATACAAGTAATTAACCAGACTAAACATTAGGCTTAACAAATTGGATACTATTATGTTCTAAAATAGTTTGCTTAAATTTCCTTGTATAATTTCTGTATTTTTAGGAAGAACTGAAGGAGTGGGATCAATGCCTTCTAATGCTGGGTGATGCTAAAGTGGATGAACATGGTAATATTACTGATACAAGAGAGTTCAACAGCATGTACTTGGACAAGGATGGTGAAGATCGTGAAATAAATGTAAGTTTCTCCATTATCCCTTACCTAGTGGGGATTTCCGGGAGAATCTGTTATGAGTCATGACTTTCCCACAGATTCAAAATGCTCTATGTAAATCTTTGACAGATTTTATCAGCAATCTGCTTTTTGAGGGGCAAGGCATATGAAGCGTTGGAGAATCGTGCACAGGCTCGACTATGGTTAGTGATAGTTTGGATATAAGACACTGATGTTCATAGACATAATTTTGGATTACAGATTTGGTCTTAACAACCTCCGTACCTCCACGAGGTAGGGGTAAGGTCTGCATACACTCTACCCTCCTAGATCCCACTTTTGTGATTTCACAAGGTATGTTGTTGTAGATTTGGTCTGAATTTCTTGTGGGTCACGGGAGAGATTTCTCGGTGCTATAGTTTTCTGTTTGGCTGGTAATCATGTTTTCACACTAGTTATGAGGGAGAAGAAATGATAGAAAGTATAGGAAGTGAGGCAAAATGACTTTCCACATTTAATTCGAACATAGTACGCCTTAGCAAAATCGAATAAGCAAAGAATGAAGAAGTTTAACAGTGTTATTTGGGTTCCTTGAGATAAAAGTGGTAAATACTCTAAACCACTTCTATCTCATCTTTTCTCTTCTAAAAAAAAGATAAAAGTGAGTTAGAGCATTTAAATTCCTTACATCTGATTTCTGGTAGTTTCTTAAACTGAAAAGAATAATTGGTGTTGAAGTAATTAACTTTTGACTATAGCCTATCATACGGATGAACCTTTTGTTTACAGACCCCATCCTTTCCCTCGCGTTGGCTCCTTCATTTGTTGTTTGTTAATACAATGAAGAAATTATTGGTTCCCCTTAATATAACTGTAGGAACAAATTATCCTCTTCTTTTGTCTTGTGTTCAGCATCTGTGATCATCAGTGATCTCATCTCCTTACCTCTCATTCCTTGCTTTCTTGTGCATAGAATTAGGTTAGAAAATGAATCTTGAAGATCCTATCTGATAAAGAGATGTATTCAGTCTCAAGTTAACTGTATTGCAAGAGATATCATTGAATCTGATGTTAAGGAATTACAATTCCATCATGTGCTGAGCTGTCTTTCCCTACTTCTTAATATTGATCTAGCAGTTAAATATTATCATCGTAAGGAGCTGACTTGTTATAACTCCGTGACACTTTCTTAGGTATAAAGCTGCTATCAAGGCTGAT-CCTTTGTGTTATGAGGTATGTAAGTTTTGGTATTCTAGTCATTCTTCTTTAATTGATGGAAGTCTTTATCTAGGGGTTGGTTAGTATGTCTCTTGGTTTTTTCTCCTCCTTTGTTATGGCTAAGGAATTAGTCTTGTCAATTACTGTATTAGAGGCCAGATTTATATGGTAAAACTCTGGAAGATACTTAGTTATCTTATATTCATTTTCCTTATCGTAGAAGCATCATAGGTCCTTCATGCTTTCAATTCCATGACAATCTTATGAAATTTATCTATGCTCATTTTCAGGCATTGGAATGTCTGATAGAGAATCACATGCTCACTTGTGATGAAGGTGAGAACCTTTGCTGTTTAAAGTGTATCTTCTTGGAACTATGAAATAGTACAAGCTAATTTGTAGAATCAAACTGTCTTAAAACAATGCAAGTACTTTTGGAGACCGTGTTTATTGTACTCTAAAAGTCCTTGGTGTGTGTTTTTATAAGTAATGAACATTCTCTTTCTTTTAACCAAACATTCTATAGCTGTTCAGTGCTGTTAAAGGCCCGTAATGTGCTCAAACTCTGAAGCTGTGCAGGGGCAGTTGGCTGCTTGTGTTGCTTAGGCAGTATCTATGTAGGCCCCAAGACTAAGGGATCCTCTTCACCACCTATAAGCTCGGTCTTGTAGGGAATAGAACTAAACAACATATATAACTGGAGAATACTCGTAAACCTCCTTGGCAAAGTGGTATATTAATTGATAAAGAAATGTTATATAAATATGTGAGTCATTAGAAATATAAAGTTGGAATTTTAGTAGGGAAGTAGCCACTGAGCCAATATTAGAAAACCAAACCCCCTCTTAGCATTAGAATCAGAAATTTTAAATAGTTTTCGGAACAATCGAAATGTTAAATATGCACTTAACTGTAGCTTCTCAAATTCCTTTGTCCTATAAGTATTACTCGTGCTATAGTTAATTTTTTCAGATCACATTTATAATTTTCATTTGTTTCTTTTGCACCTTTATTTACCATGGCCTGCTCTTTAATTGTGTTTTGCACTTAAAATCTTGTTGAATTTTGGCATTTTTTCTGCTTTTACCTTTTTTAATGCTATTTATTGTTGATACTATCATTGAAAACTGCCAATCTTTTAGATGATAGTATTATTGTGTTAATGTTATCTTTGTTAAAGGAATTATTATGAGAAATTGACCAATCCAGTTGCTAGTGAATTTCAGAGAGAACCCTGCTCTCATGTTTGCAGTTTGGTCCTGAAGATGGGTGGCTTTCTTCATT</genome_strand>
        <mrna_strand>CGAGGC-CCGCCTCTTCTCTTCTGCCCAAATCTGATTCCCAAAACCTTCTCAATTTTGAATTCAAACCTTGAACCAATCAAAGAGAAATTGGTGTACCAAACCAATGAGGGAAGATGAAATTGAGAGGCTAAGAGGTGTGGTGAGGGATTGTGTGAGTAAACATTTGTATTCATCAGCTATCTTCTTTGCTGATAAAGTAGCTGCAATTACTTCTGACCCAGCTGATATATACATGCAAGCACAAGCTTTGTATCTTGGTCGACACTATCGCCGGGCTTTTCACCTTCTTAATGCTTCTCAAATCGTCCTTCGTGACCTCCGCTTCCGATACCTCGCCGCCAAGTGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGCTGAAGGAGTGGGATCAATGTCTTCTAATGCTGGGTGATGCTAAAGTGGATGAATATGGAAATATTACTGATACAAGAGAGTGCAACAGCATGTACTTAGACAAGGATGGTGAAGATCGTGAAATAAAT.........................................................................................................ATTTTATCAGCAATATGCTTTTTGAGGGGCAAGGCTTATGAAGCGTTGGAGAATCGTGCACAGGCTCGACTATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAAAGCTGCTATCAAGGCTGATCCCTTTGTGTTATGAG...................................................................................................................................................................................................................................................................................GCATTGGAATGTCTGATAGAGAATCACATGCTCACTTGTGATGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAAACCCTGCTCTCATGTTTGCAATTTGGTCCTGAAAATGGGTGGCTCTCTTCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E424118" ref_strand="+" ref_description="SGN-E424118 [STM-43-G3]">
      <seq>ccgctcttctcttctgcccaaatctgattcccaaaactctcaattttgaattcaaacttgaacaatcaaagagaaattggtgtacaaacaatgagggaagaagaaattgagaggctaagaggtgtggtgagggattgtgtgagtaaacatttgtattcatcagctatcttctttgctgataaagtagctgcaattacttctgacccagctgatatatacatgcaagcacaagctttgtatcttggtcgacactatcgccgggcttttcaccttcttaatgcttctcaaatcgtccttcgtgacctccgcttccgatacctcgccgccaagtgccttgaagagctgaaggagtgggatcaatgtcttctaatgctgggtgatgctaaagtggatgaatatggaaatattactgatacaagagagtgcaacagcatgtacttagacaaggatggtgaagatcgtgaaataaatattttatcagcaatatgctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="36731" stop="47801"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37031" g_stop="37366" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="336" r_length="336" r_score="0.958"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37367" i_stop="47364" i_length="9998">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47365" g_stop="47499" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="337" r_stop="471" r_length="135" r_score="0.956"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47500" i_stop="47604" i_length="105">
            <donor d_prob="0.976" d_score="0.96"/>
            <acceptor a_prob="0.908" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47605" g_stop="47626" g_length="22"/>
          <reference_exon_boundary r_type="cDNA" r_start="472" r_stop="493" r_length="22" r_score="0.955"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E424118" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E424118" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37031" e_stop="37366"/>
          <exon e_start="47365" e_stop="47499"/>
          <exon e_start="47605" e_stop="47626"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGCTCTTCTCTTCTCCCCCAAATTCTTCCCCAAAACTCTCAATTTTGAATTCAAAGTTGAACAATCGAAGAGAAATTTGTATACAAACAATGAGGGAAGAAGAAATTGAGAGGCTAAGAGGTGTTGTGAGGGATTGTGTGAGTAAACATTTGTATTCATCAGCTATCTTCTTTGCTGATAAAGTAGCTGCAATTACTTCTGACCCAGCCGATATATACATGCAAGCACAAGCTTTGTATCTTGGTCGACACTATCGCCGTGCTTTTCACCTTCTTAATGCTTCTCAAATCGTCCTTCGTGACCTCCGCTTCCGATACCTCGCCGCCAAGTGCCTTGTATGCCCTTTTTACTATACAAATAATTGAATAGTTGATTGTTTATTTGTTCCAAGATAATCCGGGTCATTTTGAGGTCTAATTGCTTCCATCTTGTTACAAGATTGTGTCTTTTTGCACTTTTATGAATAAGGTTATATGGGATCTTCATGTTTATGTGTTAATTGAGTAAAAAGGCTACTTATGCATTGTAATTTTATGTTAAGTGGTGATTAACAAAAGTAGGTTTAGGCTCTAGTAGCAAAATGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAACTTATAAGGGTGTATATTTTCCTTGACAGGTTGAATCCTTAATTTTGTTTTTTCCAGGTACCATTTGCCTACTTTGTACATTGGAATGGAATATATGCGTACTCACAGCTTTAAACTGGCTGAGCAGGTGATTATACATTGTCTGTGGTTTCCTATGTTCAACACTTGGTTATGTTAGGTTCTGAGAAAAAATATTCTCTTCTCTGAGTCTGCACAAGTATGTGTGTTCATGCTGGTTGTTCATATCCTGAAGTCTATTGATATTGTCTGGAGTTCCCCGAATAATAGTGCTGATAATGTTCCCCTCTAGTTTTTTATGCAGGCAAAGTCAATATGCCCCTCAGATCCACTTGTATATAATGAACTTGGAGTTGTTGCTTATCATATGAAGGAGTAAGGGTCTCTACTCTTGTGAATTTGCGACATTTATGATTTAGTTGCGTTAACATTTCTCTCATTTATCCTCTAAAAGTGATAAAACATGTATTTTCTGTGTTAATCTCAACCACTTAGCATTTTGAAAATTATGGGTATATTGTTCTGAAGTCTTGTTCAACCTACCATACTCGAGTATCTTGTCCCTTAGTACGAAAAATTCTGTTGATCTTTCTCTTGTTATATTCTTATCCGTTTTACCAAAACTTTATTTAATTTTCTCTCTTTCAGGTATAAGAAAGCAGTGCGGTGGTTTGAGAAAACATTGTCTCACATTCCATCTTCCTTAAGTGAGATGTGGGAATCAACAGTAATCAATCTTGCTCATGCCCTCAGAAAATTAAAGTAAGTGTCTTATGCTAATATTAGTTTTGTGACATACAAGTTGTAGTTTGGTGACCATTTGTTTTCGTTCTCATTAGATCCCAAAAAATAACATAGATAACAAGGTTACATGTCCTCAGGTTTTACTATCGTAGTATTCTTCGATGAGGTTCGTATTTCAAAAAGTTCTTTAAATGATAAGAAGATTTTTCACATATTTATTTCGGTTAGTGTGATAATGAGTTTACCAGCCGGAGAAAGCTGAACAGCTTTACCAGCTGTGTGATTAGTTCTTTCTTTTCTTAGAAAAATTACATGAAATGGAGTTAATATACGGAAGATGCTTTGAATCTCTTGGGAGAACTTTTTAGTCCTTAGGTTACTGATTATATGGCCAATGGTCATTCTTTAGGGAATTAATATTAGGGACATCAAATTTTCCCTGAGGCACCAAACATTGATAGATAGATATATGCAATAAATAAACTTTTAATGCATATTAATTACCCTTTGAACCCATAACTTCAAAAGTAGAATGAGTTAAGTGCTAACCCAACAATTTAAATCTCGGATTCACCTTTGAAAGTAAGTTTGTAAACATTAACATTAAGCAAAACTTTCTTTCAGGAGGTACAACGAGGCAATCGCATATTATGAGAGAGCCCTTGCATTGTCTACAAGAAGTCTAAGTACTTACGCTGGTCTTGCATACACTTATCATCTCCAGGTAATAAATCTCAGATTATATGATGTCCGAAGTAACAAACTTGGCTTTGATATGTTGTTGCAATTATGCAGAACAATTACACATCAGCTATTACATACTATCACAAGGTGTGTTTCCATTTCAAATGTGTAAATACCGCTATTTGGTCTGATTAAATCGATATTGAGTCTGTTCCATTTCCTAAACAGGCGTTGTGGTTCAAACCAGATGATCAATTCTGCACAGAAATGTTAACTTTAGCTCTTGTTGATGAAAGCCGCCATGGAATTGACCCAATAGTTGAATCTCGTTCTGGTGGTCTGTTTATGTAATGCAGAAAATTCTTTGGTAATGTTATTCATCTGTTTTTTTTTTATGATAATTTCTCCAAAAGCTTAGGAAAACAATAAACATATCTTGTTGTATCATAGGCTAGTAGGAGCAGGTGTCGATAAATTTGTATCTACATATACATATCTATAATTTATTTTAGATCATATTAAATCGATACAGGAAAAAAAACCTTTTTTGCTGATGGTGAGTTGATAGAGATTGAAACTTTTTTTTCTATTATCATAATTCATATGAATGCATTTATTGTAATCATATAGGCCGTTTTTTTTTTATTATTATGTATGTTAGGTAAGTATTATTTTGTTTTTATGTAATTCATATGAATGCATTTATTTGTATTCATTTAAGGTTTTCTTAAATTCTGCAATAAAAGTTTGATGACTAGTGAAACGTGCAAACACCAGCTTACTACAATTTGACCCCATCATTAAATATTACTCCAATTTTTATTTTTATTTTTAAAAAAAACTTTTTCGTTTTAAATTTGTTTAAAAAAGAATGATTTTTTTTATAATATTTTAATTTCAATTTTTTTAAATGACATGTTTTAAGTCCGATCATAGGATAATTTGTACATTTGACATAATTTTAATTTACGATTATAAGATTTAAATTTTTTTTATATTTTTAAATTTGTGTCAAGTCAAATTAAATATTCTTTATAATACAGAGGGAGTATCAAAATTTTCATTCAATCCTACTCCATACATTAAAGGTATAAACCAAATTTTCTCTTTTTCTATCTCTTTTGTAGAAAGGTTTTTATTTTCTACCACAAAAATAATGATATTTTAATCGTTGAAAAAATATTTTTAAAGATAAGATTTTTATTTATTAATTTTATAAAATCAAGATATAAGTAATTAAAATTTTCCATTTTGCCCATATTTTTAAATGTTTTTGTAAGTAAAAATATTTCAAAGTTTGTCAATTATTTAATTTGATATTGAAAGATAAAGACACCGAAGTATAATGTATTAAAAAGAGTAATGATTGGAGATGCATTTCATTTTTTTTTTTATTTTTTTTTGAAAGTTCTATGAAGAAATGGAATTTCTCTTAAAAAATTGAAGGAAACTTGAGAATCTTTTTAAGATTAGATTTTTAAATTTTGTGATCACACATATTTAATAATTTAAAGATAAATTATTCAAGTTTCTTTGAAGATTTTATGGTCAAAGCTTAAGAACTTCTCATTCAATTATTTGTCATATACTTCCTCCCCCTATTTACTAGTACAAATGCTTTATCCTACCATCTTCACTTGTTCAGATTTAATTTGACATATTATAAATAAATAAATAAAAATGATAGTTTTATTATTTCACATCTATTAATTACTCTGTAAGTCATTCAAATGCTTTCAAAGTTTCAAAACATGTACCCAAAATTTATTAATGAGGAAAAGAGTCTGAAATATATTCGAATTTTGATCGAAATTGTTATAACAATTTATATTTTGCGCATTACCTTTTACCTCACTACATTATTTAATAGTATATATGTTAAAAATATATGTGTCAACGTGAATATCATAAATCTTATATTATTATAAATAGTAACTTGTCCACGTGAGCTTATATAATGCTTTCATATACATTAATTAGTTAAGATAATCATCCATCTACAATTTCATCTATAAAAAAGGCATAGCCACACAAAGTGGAATTCACAAAAAAAAATAAACTTTTAGAGAGAAAAAAGTATTAAAAACTTAGAAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAGGTTTGTGCATATGTATTTCTTTCGTCCTAATTTACGTGATATTTTTTAGATTTCAAAAGTTAAATAAATATTTACTTAATTACTAATAATCTTTTATATGCCTTATTATTATTTTGAATTGTTAAATATTGTGATTTATAGTCCATCCAGACTATTTTACATCTTGTGTCAAATAATCCTTATTTATTGATCCCAATTTGTTTTTGTTTTGTTTCAATTCATCTCCTTATTTTTTTCAATTAAGGATAAAAATGAAATCTCATAATTAATTATTTCTTAATTTTTTAAAAATGACAATCAATCTTGGATTAAGAAGTAGGAGAAATAAGATAAATTGAAGGGGGTAATATTTTTTTTTTACATAATTTTTAAATACAAAAATTTTAGTATAAATTTTATAGCATTAAAAGCTAATTATTATATTAGAGATTATGAAAAAAAATAATAAGAAGTGTATTTATGTAATTAAAGTAGTAGTATTTATCATCTTTCATGTAAATACAATTTGTTTTGTTTTGTTTTATGATTTTGAAATCAGGTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATGGTAAGACTTGCAAAATACTATTCTATTCAGCAACAGAATAAATAATCTAGGCCAGAAATTTATCTGTTTAAATGTAATTTTCATTATTATGAGATTTAATGAAGTAAAATAAATTATAAATTTAAACACATGTCATGTATGTATTGACTTGGTGTAAACATTCGGGGTGTGTTTGGTATGAAGGAAAATGTTTTATAGGAAACAAGTAGATATTTGATTTATTTTCTCTTGTTTAATTTGTGAGTAGAAAATATTTTTTGAAAAATATTTAGTGTTTGATTTTTGAATAAAATGTTTTTGAGAAATATCTTTTATTTTTTACTAAAGTATAAAATAATTTTTGAAGTTGAAATTAGTTTTTAGAAACAAACTTAAAATTCTTTTTCTTTGTGGGTGGGGGGCTAGTAAGGGATAGTTGTAGGGTGGGGGGAATCTAGGGTAGGGATGAAAAAATAAAATTTGAAGTTTAAAATATGTTTTAAGAACAAATTCAATTTCTTTTTGGGTTGTAGGGGGGACTGGGGTAGTAGGGGTGAGTGGGTGGGGGGTCGGAGAGCACGGGGTAGTTTAAAAATGAATTTTAAAAGTTTGAAAATATTTTTAAAAAACTAACTTTAATTATTTTTTATTGGATGGGGGTGGTAGGGGGATCAACGATGGGTGAAAAAAATAAATTTTGAAGTTAAAAATATTTTTTTTAAAATAAACTTAAGTTTTTTAGAGATAGGGGGGCTGGTAGGGGTGGATGGGTGGGAGGCAGGTAGGAGGGTGGTTTGGGGGTCTGGTAGGATGGGGTTGGGGTTGGAAGAAAGTTTTGAAAAAAGTTTATCTTAAATTTGAGGAAAATAAGTTAATTTGAAAAACATTTTTCAAAATATTTGACCAAATCAAACATGAGAAAATTGAAAAAATATTTTCTTTCATACCAAACACACCTTCGGTGCGGATAAATTTTACCCATAATTTAGCTAAATTGTTCTTTTATTTAATATTTCTTTTAGCAAACGTAAAAGAAAAAATATAACAAATAAAATGAAACCAAAAATTCACATTCTCGGCTGCTTCCGGTCCGATAGGTCGGTCGCCCTCTAGCCAGTGACTAACCCAGCTATGGAGCTAGGTGTATACCGCCACGTCGAGACTCTCATTCAAAAGTGCAAATAAGCAAAGAAAATTCTCCGCTCAAACTAATTTCATATTGGTAATATCAATCAATACTTTTTTATACAAATTTATTCAAATTTATATATGGGGATAATTTTAAAATTATTCAATCATATTGAATTGAATAGTATAATCATTTCTTCATTAAATAAAAGAGTGTACTGATAACATTCTTTTTCCCTCAATGAAATGCCTTCACATCACCACATATATCTTTAATCATATATGTAGTAGGTAGTGATACATATAGGCCCATTATAACCCCACTATGATCATCATGTTCTATAGTATCTATATTCTTAAAATAATATAGTATTTTGTTTACATATTAAACACACAAATGAATTATTTTTTACAAAAATATCTTTTTTTTTTCTTTATTTATATCAATTTTACTTTATGTTTTGCGATGAGATGGGACAGGAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGACATTGGGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAGGTCTCTCTCTATTCCTCTTACATACTTTTACACTATCGTAAAATAATATGCAGATATATCCTCTATCATATTTTTGGGATATTGGTACTTCTGTCGTTCAAGAACTAGAACATATACGTCATTCACTCTAACGGCAGACTAAATAAAAACACGTGGCACAATCTTATTCGTCGATATGATATTTAATAAATGTCAGGTCATTGGATAAAGATTACGACATGTGTATGTCCGTTAGTATAAAAAGTATATATGTTCTACTTTTTGGGCATAAGGGGCATCAATATCTCAAAAGTATGATGGAGGGTATCTGCATAATATTTACCATTTTTTCCTTTTGTTTTTGACAATTTATAAGGTAAATTAAAACGGCATACACATCACTCTTTTCAATTTATTTTGTGGATTACACTAAATATATTGCTACTATTAATTTTATTTCATTTATTACTTTACAAAATAAAAAATATCACTAAATTTGTTTTGCTAGGAAATCCACTTTAAAAATGATACTGTTTGATTTTATTAATAAGAAGAACACAAAAATAATCAAAATGAATTGAGAAATAATATATGTATAAATTTTATAATTACTTATATATTATTCACAATAAAATATAAATATACTGTTAAATTTTAATTAACTTAAAATTTTTATTTTTATCATTTTTTCAAGTGCAATACTTAAATTTTCGAGTATAATGACTTTAGTATTGATTAACTAAATCACTTTGTTCGTATAATAATAATTTTAGTATAGTTTAATTAAATTCATAATAACTTTCTTGTAGATTTTTCGTGTACTAGATGTTTGTGATGTGTATGCCATCTACAAACTTTTACTTTCAAACAAAAAAAAACTAAAAAATTCAAATCAAACCAAATCGACGATTATTTTTTATTTGATTTTAAAAATTCAAAAATCAATAAAATTGATTTTGAAAATGATTAATCTTGAACATTTGACTTTTGTTTTTCTCTCTCTTTATATATATAATTATGAATTTAAATAAATTATTTTCTAAATGTTGACAGGTTGATGAATCACTAAGAGCAGAGGATGTAGAGGTATATTATGATCCAACGGAACTTTTTGGTGAACTACTCAAAGGACCAAAAATTTCTGAATCTAATGTTGAGCACCACTAGTCATGGTTTATTGATTTTATGAAGTTTTTTTTTTTATGTTTTTTCATAAAATAAACTTTCTCTGTTTGGATCGCACAATATTACAATACAATGTTACAAAGTTTGTTTGGATTGATTTATTTGAAGTGTTTAAAATTAAAATAACTTTGAATATTTGAATAAATTAAAAGGTGTTTAAACAGAGAGTTCAATTTTAAAGATCTTGTGCTTATGTTTAACTCTAGGCTTCCTTATTTAAGGAATCCATTAATTTCGGTCACTAGACTTTCCTTCATGTTGTTTTTGGTTTTGAGGTAGTCAGGGGTCATGTTTCGGCGCACTAATGTTTACAATTGAACTAGTAAAGGCTTATTTTAGACTCGTAGAAANTATAATCTCATGAATTTTTTTAAACTTTTTTATTCAGCTNNATGTATTNCAATTTGGTACCAGTTACGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGGGGGGATTTAACAAAAGTAGGGTTTGGGTTTTGGTGGAAAATGGGGAATAACTACCCAAAGAAACTGTTTTGGGTATTTGTTTATTTTTTTTTTGGGGGATCAACAAGTTTAGTGGTGTTCTTTAGCTGTTAAATTAAGTTATACAGCTAAGTTGTTGTGCTTTAACATTGAAAGTGGTGATTCAGCAAAGTAGGTTCAGCCTTATATACGGTTTTTTGTTTTAGTTATCACTAGTAAATGGGACACAAATATTACACAAAGCAGTGTATCTTAAGCTGTTATCGAGCAGTGTGTTGGACTTTATTATGTAAAACTTCATAGATACTTGGAACTTGATTCAGGTGTTAAATTTCAGGGGTTGACATCATTTGCCAGATGCTTGTTAATATATTTAAGATGGTTTGATCATATATCAGTGAGGTTGCTCAAAAATGTGAAGGCTTGATAAACCCTGTCTTTTTGTAGTGTAAACTACTTTTTCCCATCCCAAGTAATGTTTTGGACTTCCATCCCCTATCTATACTATAACCTCAAACCTCTTTCTACTTTCTGTGCACCAAATGTTGATTAGGAGATGAAAGAAGCACACCGTGGAATCAAACCAGTCATTTTCCTTATATGGTGAAAGTTGACAGTGAAGATCTACACTTGAATAAAAAATCTACACTAGAGAGCATACACTTGTTAGAGGTGATCCCCACCTCCCCTTTTCACCTAATCCATTAGTTCACAGCTTCACCACTTTATCTAGGATTGAGCTACCACACTCTTGAAACTCGGTAAAATTGTTTTCATTCAATGAGAATATAAAGAAAAGTAGCAATTCTTATAAAAAAGATAAACTGAACAAGTGGATCAGATTCTGGTTCTATTCTTCTTTGTTTGTCTTCCCTAACTTGAAGTGTTACAGTTGCAACACTGCAGAACACAAAACATTTAACTCAACACATAGTACGTGATAGTATTTCCAGCCTGACAAGTCCCACTAATCTTCTACTGTCATTGAATGCCTGCTTGACGCATTCATAAGCCATGAAACTACTTGCAAACAGGTTTAGTGCTTCACCTTGCTTGGGCAGTGCTTCAGTGCAAACACAAAGGTGTTAGGCGTGTGTCTCAGAGTCCAACTGTCTTAAAGAGAGGGCTAAACAATAAATATTTCACCTAATTGTAATTTTGAAAATAAGTTATATAATTGTTATTTGTGTTTATAGTTATTATTCTTGAACTACTACATATTCTGAATTTTTTTGTTAATTAGAATCCCGTGCTTTGTGTGTAGTGCTTAAAGTTAGACATTTGTGCTTCTTTTCACTTTTTGCCATTGATTACATGGCTGCCTACTTGGGCAAGGTGCTACCATTTGAATGTAGGTTGCCGTCTTTCCACTTTCAGTTATCAACATGTCACATCCCTAAGTATGATTATGGTTAGGTTTTAATCTGTAGTATCTGTCCCTTGATTGAAGCCTCAATCCCTAAATAATTGGGATTAACTATAAGTGCTAGTTGGATCCATATTTTCTTCTTCTTCTATATATGTGATCTCAAGAACAGGTCATCATAATCTTGCACTTACCCCTACACTAACATACAAGTAATTAACCAGACTAAACATTAGGCTTAACAAATTGGATACTATTATGTTCTAAAATAGTTTGCTTAAATTTCCTTGTATAATTTCTGTATTTTTAGGAAGAACTGAAGGAGTGGGATCAATGCCTTCTAATGCTGGGTGATGCTAAAGTGGATGAACATGGTAATATTACTGATACAAGAGAGTTCAACAGCATGTACTTGGACAAGGATGGTGAAGATCGTGAAATAAATGTAAGTTTCTCCATTATCCCTTACCTAGTGGGGATTTCCGGGAGAATCTGTTATGAGTCATGACTTTCCCACAGATTCAAAATGCTCTATGTAAATCTTTGACAGATTTTATCAGCAATCTGCTTTT</genome_strand>
        <mrna_strand>CCGCTCTTCTCTTCTGCCCAAATCTGATTCCCAAAACTCTCAATTTTGAATTCAAACTTGAACAATCAAAGAGAAATTGGTGTACAAACAATGAGGGAAGAAGAAATTGAGAGGCTAAGAGGTGTGGTGAGGGATTGTGTGAGTAAACATTTGTATTCATCAGCTATCTTCTTTGCTGATAAAGTAGCTGCAATTACTTCTGACCCAGCTGATATATACATGCAAGCACAAGCTTTGTATCTTGGTCGACACTATCGCCGGGCTTTTCACCTTCTTAATGCTTCTCAAATCGTCCTTCGTGACCTCCGCTTCCGATACCTCGCCGCCAAGTGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGCTGAAGGAGTGGGATCAATGTCTTCTAATGCTGGGTGATGCTAAAGTGGATGAATATGGAAATATTACTGATACAAGAGAGTGCAACAGCATGTACTTAGACAAGGATGGTGAAGATCGTGAAATAAAT.........................................................................................................ATTTTATCAGCAATATGCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E212356" ref_strand="+" ref_description="SGN-E212356 [cLEC-74-E22]">
      <seq>acaagctttgtatcttggtcgacactatcgccgtgcttttcaccttcttaatgcttctcaaatcgtccttcgtgacctccgcttccgatacctcgccgccaagtgccttgaagaactgaaggagtgggatcaatgccttctaatgctgggtgatgctaaagtggatgaacatggtaatattactgatacaagagagttcaacagcatgtacttggacaaggatggtgaagatcgtgaaataaatattttatcagcaatctgctttttgaggggcaaggcatatgaagcgttggagaatcgtgcacaggctcgactatggtataaagctgctatcaaggctgatcctttgtgttatgaggcattggaatgtctgatagagaatcacatgctcacttgtgatgaagagagaaccctgctctcatgtttgcagtttggtcctgaagatgggtggctttcttcattctattcttgtttgataaagaagtatgataaagaaaatgtggtggaagctaaatttagagagctggaacagagtggacctaatacaaagctttcggacaaatctgttttgtgtacgcttaaatccaactctgatcttttagcctgcaaagctgagtattatcatcaatgcggtgaatatcagaaatgctttgaactaacatctgaattgcttgaaaaggatccgttccaccctcagtgtaccctggtgcacttagcagcagcaatggagttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="36958" stop="50976"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37258" g_stop="37366" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37367" i_stop="47364" i_length="9998">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="47365" g_stop="47499" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="244" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="47500" i_stop="47604" i_length="105">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.908" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="47605" g_stop="47678" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="245" r_stop="318" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="47679" i_stop="48668" i_length="990">
            <donor d_prob="0.104" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="48669" g_stop="48708" g_length="40"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="358" r_length="40" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="48709" i_stop="48983" i_length="275">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="48984" g_stop="49029" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="404" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="49030" i_stop="49919" i_length="890">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="49920" g_stop="49999" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="484" r_length="80" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="50000" i_stop="50262" i_length="263">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="50263" g_stop="50444" g_length="182"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="666" r_length="182" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="50445" i_stop="50607" i_length="163">
            <donor d_prob="0.917" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="50608" g_stop="50676" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="667" r_stop="735" r_length="69" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E212356" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212356" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37258" e_stop="37366"/>
          <exon e_start="47365" e_stop="47499"/>
          <exon e_start="47605" e_stop="47678"/>
          <exon e_start="48669" e_stop="48708"/>
          <exon e_start="48984" e_stop="49029"/>
          <exon e_start="49920" e_stop="49999"/>
          <exon e_start="50263" e_stop="50444"/>
          <exon e_start="50608" e_stop="50676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAGCTTTGTATCTTGGTCGACACTATCGCCGTGCTTTTCACCTTCTTAATGCTTCTCAAATCGTCCTTCGTGACCTCCGCTTCCGATACCTCGCCGCCAAGTGCCTTGTATGCCCTTTTTACTATACAAATAATTGAATAGTTGATTGTTTATTTGTTCCAAGATAATCCGGGTCATTTTGAGGTCTAATTGCTTCCATCTTGTTACAAGATTGTGTCTTTTTGCACTTTTATGAATAAGGTTATATGGGATCTTCATGTTTATGTGTTAATTGAGTAAAAAGGCTACTTATGCATTGTAATTTTATGTTAAGTGGTGATTAACAAAAGTAGGTTTAGGCTCTAGTAGCAAAATGGGGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATAACTTATAAGGGTGTATATTTTCCTTGACAGGTTGAATCCTTAATTTTGTTTTTTCCAGGTACCATTTGCCTACTTTGTACATTGGAATGGAATATATGCGTACTCACAGCTTTAAACTGGCTGAGCAGGTGATTATACATTGTCTGTGGTTTCCTATGTTCAACACTTGGTTATGTTAGGTTCTGAGAAAAAATATTCTCTTCTCTGAGTCTGCACAAGTATGTGTGTTCATGCTGGTTGTTCATATCCTGAAGTCTATTGATATTGTCTGGAGTTCCCCGAATAATAGTGCTGATAATGTTCCCCTCTAGTTTTTTATGCAGGCAAAGTCAATATGCCCCTCAGATCCACTTGTATATAATGAACTTGGAGTTGTTGCTTATCATATGAAGGAGTAAGGGTCTCTACTCTTGTGAATTTGCGACATTTATGATTTAGTTGCGTTAACATTTCTCTCATTTATCCTCTAAAAGTGATAAAACATGTATTTTCTGTGTTAATCTCAACCACTTAGCATTTTGAAAATTATGGGTATATTGTTCTGAAGTCTTGTTCAACCTACCATACTCGAGTATCTTGTCCCTTAGTACGAAAAATTCTGTTGATCTTTCTCTTGTTATATTCTTATCCGTTTTACCAAAACTTTATTTAATTTTCTCTCTTTCAGGTATAAGAAAGCAGTGCGGTGGTTTGAGAAAACATTGTCTCACATTCCATCTTCCTTAAGTGAGATGTGGGAATCAACAGTAATCAATCTTGCTCATGCCCTCAGAAAATTAAAGTAAGTGTCTTATGCTAATATTAGTTTTGTGACATACAAGTTGTAGTTTGGTGACCATTTGTTTTCGTTCTCATTAGATCCCAAAAAATAACATAGATAACAAGGTTACATGTCCTCAGGTTTTACTATCGTAGTATTCTTCGATGAGGTTCGTATTTCAAAAAGTTCTTTAAATGATAAGAAGATTTTTCACATATTTATTTCGGTTAGTGTGATAATGAGTTTACCAGCCGGAGAAAGCTGAACAGCTTTACCAGCTGTGTGATTAGTTCTTTCTTTTCTTAGAAAAATTACATGAAATGGAGTTAATATACGGAAGATGCTTTGAATCTCTTGGGAGAACTTTTTAGTCCTTAGGTTACTGATTATATGGCCAATGGTCATTCTTTAGGGAATTAATATTAGGGACATCAAATTTTCCCTGAGGCACCAAACATTGATAGATAGATATATGCAATAAATAAACTTTTAATGCATATTAATTACCCTTTGAACCCATAACTTCAAAAGTAGAATGAGTTAAGTGCTAACCCAACAATTTAAATCTCGGATTCACCTTTGAAAGTAAGTTTGTAAACATTAACATTAAGCAAAACTTTCTTTCAGGAGGTACAACGAGGCAATCGCATATTATGAGAGAGCCCTTGCATTGTCTACAAGAAGTCTAAGTACTTACGCTGGTCTTGCATACACTTATCATCTCCAGGTAATAAATCTCAGATTATATGATGTCCGAAGTAACAAACTTGGCTTTGATATGTTGTTGCAATTATGCAGAACAATTACACATCAGCTATTACATACTATCACAAGGTGTGTTTCCATTTCAAATGTGTAAATACCGCTATTTGGTCTGATTAAATCGATATTGAGTCTGTTCCATTTCCTAAACAGGCGTTGTGGTTCAAACCAGATGATCAATTCTGCACAGAAATGTTAACTTTAGCTCTTGTTGATGAAAGCCGCCATGGAATTGACCCAATAGTTGAATCTCGTTCTGGTGGTCTGTTTATGTAATGCAGAAAATTCTTTGGTAATGTTATTCATCTGTTTTTTTTTTATGATAATTTCTCCAAAAGCTTAGGAAAACAATAAACATATCTTGTTGTATCATAGGCTAGTAGGAGCAGGTGTCGATAAATTTGTATCTACATATACATATCTATAATTTATTTTAGATCATATTAAATCGATACAGGAAAAAAAACCTTTTTTGCTGATGGTGAGTTGATAGAGATTGAAACTTTTTTTTCTATTATCATAATTCATATGAATGCATTTATTGTAATCATATAGGCCGTTTTTTTTTTATTATTATGTATGTTAGGTAAGTATTATTTTGTTTTTATGTAATTCATATGAATGCATTTATTTGTATTCATTTAAGGTTTTCTTAAATTCTGCAATAAAAGTTTGATGACTAGTGAAACGTGCAAACACCAGCTTACTACAATTTGACCCCATCATTAAATATTACTCCAATTTTTATTTTTATTTTTAAAAAAAACTTTTTCGTTTTAAATTTGTTTAAAAAAGAATGATTTTTTTTATAATATTTTAATTTCAATTTTTTTAAATGACATGTTTTAAGTCCGATCATAGGATAATTTGTACATTTGACATAATTTTAATTTACGATTATAAGATTTAAATTTTTTTTATATTTTTAAATTTGTGTCAAGTCAAATTAAATATTCTTTATAATACAGAGGGAGTATCAAAATTTTCATTCAATCCTACTCCATACATTAAAGGTATAAACCAAATTTTCTCTTTTTCTATCTCTTTTGTAGAAAGGTTTTTATTTTCTACCACAAAAATAATGATATTTTAATCGTTGAAAAAATATTTTTAAAGATAAGATTTTTATTTATTAATTTTATAAAATCAAGATATAAGTAATTAAAATTTTCCATTTTGCCCATATTTTTAAATGTTTTTGTAAGTAAAAATATTTCAAAGTTTGTCAATTATTTAATTTGATATTGAAAGATAAAGACACCGAAGTATAATGTATTAAAAAGAGTAATGATTGGAGATGCATTTCATTTTTTTTTTTATTTTTTTTTGAAAGTTCTATGAAGAAATGGAATTTCTCTTAAAAAATTGAAGGAAACTTGAGAATCTTTTTAAGATTAGATTTTTAAATTTTGTGATCACACATATTTAATAATTTAAAGATAAATTATTCAAGTTTCTTTGAAGATTTTATGGTCAAAGCTTAAGAACTTCTCATTCAATTATTTGTCATATACTTCCTCCCCCTATTTACTAGTACAAATGCTTTATCCTACCATCTTCACTTGTTCAGATTTAATTTGACATATTATAAATAAATAAATAAAAATGATAGTTTTATTATTTCACATCTATTAATTACTCTGTAAGTCATTCAAATGCTTTCAAAGTTTCAAAACATGTACCCAAAATTTATTAATGAGGAAAAGAGTCTGAAATATATTCGAATTTTGATCGAAATTGTTATAACAATTTATATTTTGCGCATTACCTTTTACCTCACTACATTATTTAATAGTATATATGTTAAAAATATATGTGTCAACGTGAATATCATAAATCTTATATTATTATAAATAGTAACTTGTCCACGTGAGCTTATATAATGCTTTCATATACATTAATTAGTTAAGATAATCATCCATCTACAATTTCATCTATAAAAAAGGCATAGCCACACAAAGTGGAATTCACAAAAAAAAATAAACTTTTAGAGAGAAAAAAGTATTAAAAACTTAGAAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAGGTTTGTGCATATGTATTTCTTTCGTCCTAATTTACGTGATATTTTTTAGATTTCAAAAGTTAAATAAATATTTACTTAATTACTAATAATCTTTTATATGCCTTATTATTATTTTGAATTGTTAAATATTGTGATTTATAGTCCATCCAGACTATTTTACATCTTGTGTCAAATAATCCTTATTTATTGATCCCAATTTGTTTTTGTTTTGTTTCAATTCATCTCCTTATTTTTTTCAATTAAGGATAAAAATGAAATCTCATAATTAATTATTTCTTAATTTTTTAAAAATGACAATCAATCTTGGATTAAGAAGTAGGAGAAATAAGATAAATTGAAGGGGGTAATATTTTTTTTTTACATAATTTTTAAATACAAAAATTTTAGTATAAATTTTATAGCATTAAAAGCTAATTATTATATTAGAGATTATGAAAAAAAATAATAAGAAGTGTATTTATGTAATTAAAGTAGTAGTATTTATCATCTTTCATGTAAATACAATTTGTTTTGTTTTGTTTTATGATTTTGAAATCAGGTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATGGTAAGACTTGCAAAATACTATTCTATTCAGCAACAGAATAAATAATCTAGGCCAGAAATTTATCTGTTTAAATGTAATTTTCATTATTATGAGATTTAATGAAGTAAAATAAATTATAAATTTAAACACATGTCATGTATGTATTGACTTGGTGTAAACATTCGGGGTGTGTTTGGTATGAAGGAAAATGTTTTATAGGAAACAAGTAGATATTTGATTTATTTTCTCTTGTTTAATTTGTGAGTAGAAAATATTTTTTGAAAAATATTTAGTGTTTGATTTTTGAATAAAATGTTTTTGAGAAATATCTTTTATTTTTTACTAAAGTATAAAATAATTTTTGAAGTTGAAATTAGTTTTTAGAAACAAACTTAAAATTCTTTTTCTTTGTGGGTGGGGGGCTAGTAAGGGATAGTTGTAGGGTGGGGGGAATCTAGGGTAGGGATGAAAAAATAAAATTTGAAGTTTAAAATATGTTTTAAGAACAAATTCAATTTCTTTTTGGGTTGTAGGGGGGACTGGGGTAGTAGGGGTGAGTGGGTGGGGGGTCGGAGAGCACGGGGTAGTTTAAAAATGAATTTTAAAAGTTTGAAAATATTTTTAAAAAACTAACTTTAATTATTTTTTATTGGATGGGGGTGGTAGGGGGATCAACGATGGGTGAAAAAAATAAATTTTGAAGTTAAAAATATTTTTTTTAAAATAAACTTAAGTTTTTTAGAGATAGGGGGGCTGGTAGGGGTGGATGGGTGGGAGGCAGGTAGGAGGGTGGTTTGGGGGTCTGGTAGGATGGGGTTGGGGTTGGAAGAAAGTTTTGAAAAAAGTTTATCTTAAATTTGAGGAAAATAAGTTAATTTGAAAAACATTTTTCAAAATATTTGACCAAATCAAACATGAGAAAATTGAAAAAATATTTTCTTTCATACCAAACACACCTTCGGTGCGGATAAATTTTACCCATAATTTAGCTAAATTGTTCTTTTATTTAATATTTCTTTTAGCAAACGTAAAAGAAAAAATATAACAAATAAAATGAAACCAAAAATTCACATTCTCGGCTGCTTCCGGTCCGATAGGTCGGTCGCCCTCTAGCCAGTGACTAACCCAGCTATGGAGCTAGGTGTATACCGCCACGTCGAGACTCTCATTCAAAAGTGCAAATAAGCAAAGAAAATTCTCCGCTCAAACTAATTTCATATTGGTAATATCAATCAATACTTTTTTATACAAATTTATTCAAATTTATATATGGGGATAATTTTAAAATTATTCAATCATATTGAATTGAATAGTATAATCATTTCTTCATTAAATAAAAGAGTGTACTGATAACATTCTTTTTCCCTCAATGAAATGCCTTCACATCACCACATATATCTTTAATCATATATGTAGTAGGTAGTGATACATATAGGCCCATTATAACCCCACTATGATCATCATGTTCTATAGTATCTATATTCTTAAAATAATATAGTATTTTGTTTACATATTAAACACACAAATGAATTATTTTTTACAAAAATATCTTTTTTTTTTCTTTATTTATATCAATTTTACTTTATGTTTTGCGATGAGATGGGACAGGAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGACATTGGGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAGGTCTCTCTCTATTCCTCTTACATACTTTTACACTATCGTAAAATAATATGCAGATATATCCTCTATCATATTTTTGGGATATTGGTACTTCTGTCGTTCAAGAACTAGAACATATACGTCATTCACTCTAACGGCAGACTAAATAAAAACACGTGGCACAATCTTATTCGTCGATATGATATTTAATAAATGTCAGGTCATTGGATAAAGATTACGACATGTGTATGTCCGTTAGTATAAAAAGTATATATGTTCTACTTTTTGGGCATAAGGGGCATCAATATCTCAAAAGTATGATGGAGGGTATCTGCATAATATTTACCATTTTTTCCTTTTGTTTTTGACAATTTATAAGGTAAATTAAAACGGCATACACATCACTCTTTTCAATTTATTTTGTGGATTACACTAAATATATTGCTACTATTAATTTTATTTCATTTATTACTTTACAAAATAAAAAATATCACTAAATTTGTTTTGCTAGGAAATCCACTTTAAAAATGATACTGTTTGATTTTATTAATAAGAAGAACACAAAAATAATCAAAATGAATTGAGAAATAATATATGTATAAATTTTATAATTACTTATATATTATTCACAATAAAATATAAATATACTGTTAAATTTTAATTAACTTAAAATTTTTATTTTTATCATTTTTTCAAGTGCAATACTTAAATTTTCGAGTATAATGACTTTAGTATTGATTAACTAAATCACTTTGTTCGTATAATAATAATTTTAGTATAGTTTAATTAAATTCATAATAACTTTCTTGTAGATTTTTCGTGTACTAGATGTTTGTGATGTGTATGCCATCTACAAACTTTTACTTTCAAACAAAAAAAAACTAAAAAATTCAAATCAAACCAAATCGACGATTATTTTTTATTTGATTTTAAAAATTCAAAAATCAATAAAATTGATTTTGAAAATGATTAATCTTGAACATTTGACTTTTGTTTTTCTCTCTCTTTATATATATAATTATGAATTTAAATAAATTATTTTCTAAATGTTGACAGGTTGATGAATCACTAAGAGCAGAGGATGTAGAGGTATATTATGATCCAACGGAACTTTTTGGTGAACTACTCAAAGGACCAAAAATTTCTGAATCTAATGTTGAGCACCACTAGTCATGGTTTATTGATTTTATGAAGTTTTTTTTTTTATGTTTTTTCATAAAATAAACTTTCTCTGTTTGGATCGCACAATATTACAATACAATGTTACAAAGTTTGTTTGGATTGATTTATTTGAAGTGTTTAAAATTAAAATAACTTTGAATATTTGAATAAATTAAAAGGTGTTTAAACAGAGAGTTCAATTTTAAAGATCTTGTGCTTATGTTTAACTCTAGGCTTCCTTATTTAAGGAATCCATTAATTTCGGTCACTAGACTTTCCTTCATGTTGTTTTTGGTTTTGAGGTAGTCAGGGGTCATGTTTCGGCGCACTAATGTTTACAATTGAACTAGTAAAGGCTTATTTTAGACTCGTAGAAANTATAATCTCATGAATTTTTTTAAACTTTTTTATTCAGCTNNATGTATTNCAATTTGGTACCAGTTACGCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAGGGGGGATTTAACAAAAGTAGGGTTTGGGTTTTGGTGGAAAATGGGGAATAACTACCCAAAGAAACTGTTTTGGGTATTTGTTTATTTTTTTTTTGGGGGATCAACAAGTTTAGTGGTGTTCTTTAGCTGTTAAATTAAGTTATACAGCTAAGTTGTTGTGCTTTAACATTGAAAGTGGTGATTCAGCAAAGTAGGTTCAGCCTTATATACGGTTTTTTGTTTTAGTTATCACTAGTAAATGGGACACAAATATTACACAAAGCAGTGTATCTTAAGCTGTTATCGAGCAGTGTGTTGGACTTTATTATGTAAAACTTCATAGATACTTGGAACTTGATTCAGGTGTTAAATTTCAGGGGTTGACATCATTTGCCAGATGCTTGTTAATATATTTAAGATGGTTTGATCATATATCAGTGAGGTTGCTCAAAAATGTGAAGGCTTGATAAACCCTGTCTTTTTGTAGTGTAAACTACTTTTTCCCATCCCAAGTAATGTTTTGGACTTCCATCCCCTATCTATACTATAACCTCAAACCTCTTTCTACTTTCTGTGCACCAAATGTTGATTAGGAGATGAAAGAAGCACACCGTGGAATCAAACCAGTCATTTTCCTTATATGGTGAAAGTTGACAGTGAAGATCTACACTTGAATAAAAAATCTACACTAGAGAGCATACACTTGTTAGAGGTGATCCCCACCTCCCCTTTTCACCTAATCCATTAGTTCACAGCTTCACCACTTTATCTAGGATTGAGCTACCACACTCTTGAAACTCGGTAAAATTGTTTTCATTCAATGAGAATATAAAGAAAAGTAGCAATTCTTATAAAAAAGATAAACTGAACAAGTGGATCAGATTCTGGTTCTATTCTTCTTTGTTTGTCTTCCCTAACTTGAAGTGTTACAGTTGCAACACTGCAGAACACAAAACATTTAACTCAACACATAGTACGTGATAGTATTTCCAGCCTGACAAGTCCCACTAATCTTCTACTGTCATTGAATGCCTGCTTGACGCATTCATAAGCCATGAAACTACTTGCAAACAGGTTTAGTGCTTCACCTTGCTTGGGCAGTGCTTCAGTGCAAACACAAAGGTGTTAGGCGTGTGTCTCAGAGTCCAACTGTCTTAAAGAGAGGGCTAAACAATAAATATTTCACCTAATTGTAATTTTGAAAATAAGTTATATAATTGTTATTTGTGTTTATAGTTATTATTCTTGAACTACTACATATTCTGAATTTTTTTGTTAATTAGAATCCCGTGCTTTGTGTGTAGTGCTTAAAGTTAGACATTTGTGCTTCTTTTCACTTTTTGCCATTGATTACATGGCTGCCTACTTGGGCAAGGTGCTACCATTTGAATGTAGGTTGCCGTCTTTCCACTTTCAGTTATCAACATGTCACATCCCTAAGTATGATTATGGTTAGGTTTTAATCTGTAGTATCTGTCCCTTGATTGAAGCCTCAATCCCTAAATAATTGGGATTAACTATAAGTGCTAGTTGGATCCATATTTTCTTCTTCTTCTATATATGTGATCTCAAGAACAGGTCATCATAATCTTGCACTTACCCCTACACTAACATACAAGTAATTAACCAGACTAAACATTAGGCTTAACAAATTGGATACTATTATGTTCTAAAATAGTTTGCTTAAATTTCCTTGTATAATTTCTGTATTTTTAGGAAGAACTGAAGGAGTGGGATCAATGCCTTCTAATGCTGGGTGATGCTAAAGTGGATGAACATGGTAATATTACTGATACAAGAGAGTTCAACAGCATGTACTTGGACAAGGATGGTGAAGATCGTGAAATAAATGTAAGTTTCTCCATTATCCCTTACCTAGTGGGGATTTCCGGGAGAATCTGTTATGAGTCATGACTTTCCCACAGATTCAAAATGCTCTATGTAAATCTTTGACAGATTTTATCAGCAATCTGCTTTTTGAGGGGCAAGGCATATGAAGCGTTGGAGAATCGTGCACAGGCTCGACTATGGTTAGTGATAGTTTGGATATAAGACACTGATGTTCATAGACATAATTTTGGATTACAGATTTGGTCTTAACAACCTCCGTACCTCCACGAGGTAGGGGTAAGGTCTGCATACACTCTACCCTCCTAGATCCCACTTTTGTGATTTCACAAGGTATGTTGTTGTAGATTTGGTCTGAATTTCTTGTGGGTCACGGGAGAGATTTCTCGGTGCTATAGTTTTCTGTTTGGCTGGTAATCATGTTTTCACACTAGTTATGAGGGAGAAGAAATGATAGAAAGTATAGGAAGTGAGGCAAAATGACTTTCCACATTTAATTCGAACATAGTACGCCTTAGCAAAATCGAATAAGCAAAGAATGAAGAAGTTTAACAGTGTTATTTGGGTTCCTTGAGATAAAAGTGGTAAATACTCTAAACCACTTCTATCTCATCTTTTCTCTTCTAAAAAAAAGATAAAAGTGAGTTAGAGCATTTAAATTCCTTACATCTGATTTCTGGTAGTTTCTTAAACTGAAAAGAATAATTGGTGTTGAAGTAATTAACTTTTGACTATAGCCTATCATACGGATGAACCTTTTGTTTACAGACCCCATCCTTTCCCTCGCGTTGGCTCCTTCATTTGTTGTTTGTTAATACAATGAAGAAATTATTGGTTCCCCTTAATATAACTGTAGGAACAAATTATCCTCTTCTTTTGTCTTGTGTTCAGCATCTGTGATCATCAGTGATCTCATCTCCTTACCTCTCATTCCTTGCTTTCTTGTGCATAGAATTAGGTTAGAAAATGAATCTTGAAGATCCTATCTGATAAAGAGATGTATTCAGTCTCAAGTTAACTGTATTGCAAGAGATATCATTGAATCTGATGTTAAGGAATTACAATTCCATCATGTGCTGAGCTGTCTTTCCCTACTTCTTAATATTGATCTAGCAGTTAAATATTATCATCGTAAGGAGCTGACTTGTTATAACTCCGTGACACTTTCTTAGGTATAAAGCTGCTATCAAGGCTGATCCTTTGTGTTATGAGGTATGTAAGTTTTGGTATTCTAGTCATTCTTCTTTAATTGATGGAAGTCTTTATCTAGGGGTTGGTTAGTATGTCTCTTGGTTTTTTCTCCTCCTTTGTTATGGCTAAGGAATTAGTCTTGTCAATTACTGTATTAGAGGCCAGATTTATATGGTAAAACTCTGGAAGATACTTAGTTATCTTATATTCATTTTCCTTATCGTAGAAGCATCATAGGTCCTTCATGCTTTCAATTCCATGACAATCTTATGAAATTTATCTATGCTCATTTTCAGGCATTGGAATGTCTGATAGAGAATCACATGCTCACTTGTGATGAAGGTGAGAACCTTTGCTGTTTAAAGTGTATCTTCTTGGAACTATGAAATAGTACAAGCTAATTTGTAGAATCAAACTGTCTTAAAACAATGCAAGTACTTTTGGAGACCGTGTTTATTGTACTCTAAAAGTCCTTGGTGTGTGTTTTTATAAGTAATGAACATTCTCTTTCTTTTAACCAAACATTCTATAGCTGTTCAGTGCTGTTAAAGGCCCGTAATGTGCTCAAACTCTGAAGCTGTGCAGGGGCAGTTGGCTGCTTGTGTTGCTTAGGCAGTATCTATGTAGGCCCCAAGACTAAGGGATCCTCTTCACCACCTATAAGCTCGGTCTTGTAGGGAATAGAACTAAACAACATATATAACTGGAGAATACTCGTAAACCTCCTTGGCAAAGTGGTATATTAATTGATAAAGAAATGTTATATAAATATGTGAGTCATTAGAAATATAAAGTTGGAATTTTAGTAGGGAAGTAGCCACTGAGCCAATATTAGAAAACCAAACCCCCTCTTAGCATTAGAATCAGAAATTTTAAATAGTTTTCGGAACAATCGAAATGTTAAATATGCACTTAACTGTAGCTTCTCAAATTCCTTTGTCCTATAAGTATTACTCGTGCTATAGTTAATTTTTTCAGATCACATTTATAATTTTCATTTGTTTCTTTTGCACCTTTATTTACCATGGCCTGCTCTTTAATTGTGTTTTGCACTTAAAATCTTGTTGAATTTTGGCATTTTTTCTGCTTTTACCTTTTTTAATGCTATTTATTGTTGATACTATCATTGAAAACTGCCAATCTTTTAGATGATAGTATTATTGTGTTAATGTTATCTTTGTTAAAGGAATTATTATGAGAAATTGACCAATCCAGTTGCTAGTGAATTTCAGAGAGAACCCTGCTCTCATGTTTGCAGTTTGGTCCTGAAGATGGGTGGCTTTCTTCATTCTATTCTTGTTTGATAAAGAAGGTAATCACTTCTTATAAGACTACATTTTATTCCATTTGATCTTCTTTATGGATCATAAACACTTAACTTTTAAGTTTCACCCAGTTGAAAAATAGAATATTGAATTTGGTACTTTATATTGATAACTAGACAGAAGCTGTACTTGAATTTTTACAGAAATGTTGAAGTGTTCTATTATTTGCGTAGAAAAATTTTAGTTTTATGTTTTGCTCATCCATTTACTCCTCAATGGAATAATTTTTTCCTTTTCCTGTGCTTCTCAGTATGATAAAGAAAATGTGGTGGAAGCTAAATTTAGAGAGCTGGAACAGAGTGGACCTAATACAAAGCTTTCGGACAAATCTGTTTTGTGTACGCTTAAATCCAACTCTGATCTTTTAGCCTGCAAAGCTGAGTATTATCATCAATGCGGTGAATATCAGAAATGCTTTGAACTAACATCTGAGTAAGTTGGTAACCCACCAGAAAGGAAATTATGTCTTTTTATTCTTTTGCTAGATCTTATTGTATACTGATCACATGTATTTTGGTACCTACTTTACATCACTACATGAAATTTGGCAACTGTTTTCTTTTCCTCTTATACTTTGGTACATGATAAAATACAGATTGCTTGAAAAGGATCCGTTCCACCTCAAGTGTACCCTGGTGCACTTAGCAGCAGCAATGGAGTTGGG</genome_strand>
        <mrna_strand>ACAAGCTTTGTATCTTGGTCGACACTATCGCCGTGCTTTTCACCTTCTTAATGCTTCTCAAATCGTCCTTCGTGACCTCCGCTTCCGATACCTCGCCGCCAAGTGCCTT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAACTGAAGGAGTGGGATCAATGCCTTCTAATGCTGGGTGATGCTAAAGTGGATGAACATGGTAATATTACTGATACAAGAGAGTTCAACAGCATGTACTTGGACAAGGATGGTGAAGATCGTGAAATAAAT.........................................................................................................ATTTTATCAGCAATCTGCTTTTTGAGGGGCAAGGCATATGAAGCGTTGGAGAATCGTGCACAGGCTCGACTATG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATAAAGCTGCTATCAAGGCTGATCCTTTGTGTTATGAG...................................................................................................................................................................................................................................................................................GCATTGGAATGTCTGATAGAGAATCACATGCTCACTTGTGATGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAACCCTGCTCTCATGTTTGCAGTTTGGTCCTGAAGATGGGTGGCTTTCTTCATTCTATTCTTGTTTGATAAAGAAG.......................................................................................................................................................................................................................................................................TATGATAAAGAAAATGTGGTGGAAGCTAAATTTAGAGAGCTGGAACAGAGTGGACCTAATACAAAGCTTTCGGACAAATCTGTTTTGTGTACGCTTAAATCCAACTCTGATCTTTTAGCCTGCAAAGCTGAGTATTATCATCAATGCGGTGAATATCAGAAATGCTTTGAACTAACATCTGA...................................................................................................................................................................ATTGCTTGAAAAGGATCCGTTCCACCCTCAGTGTACCCTGGTGCACTTAGCAGCAGCAATGGAGTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E537997" ref_strand="+" ref_description="SGN-E537997 [TUS-56-O5]">
      <seq>taaaaacttagaaatatggctagtgagaaggaaaaaattaaaattacaagtgataagtataggctattcttgcatgaagatcaagctgctgctgaaggaaccatccaatggagacatggtgatgctccaagttatggaagtgttaataaactctttgaagaaggaaggactaaggtttggccagaaggatctcttgaagaaacagtacaaaatgctataaaatcatgggaaatggaactttcacataagactagagtaaaagactttaggacaattaatcctcaaaaattcaagctcttcgtaaatggaagagacggattgtccgcggaagagacgttgaaagtgggaagctacaatgcgctattgaagagttcaatgccaaatgaattcaaatattacaaagcagatgaagagacatttgaatcatcccacaatgcttttagatcagcttttccaagaggatttgcttgggaagtgatcagtgtatacacagggccaccaattattacatacaaattcagacattggggtttctttgaaagtccatttaaaggacatgcccctactggcaacatggtccaattctatggccttggtatattgaaagttgatgaatcactaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="40950" stop="45329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41250" g_stop="41423" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41424" i_stop="41961" i_length="538">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41962" g_stop="42094" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="307" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42095" i_stop="43681" i_length="1587">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43682" g_stop="43980" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="606" r_length="299" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43981" i_stop="45012" i_length="1032">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45013" g_stop="45029" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="623" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E537997" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>623</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E537997" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41250" e_stop="41423"/>
          <exon e_start="41962" e_stop="42094"/>
          <exon e_start="43682" e_stop="43980"/>
          <exon e_start="45013" e_stop="45029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAAACTTAGAAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAGGTTTGTGCATATGTATTTCTTTCGTCCTAATTTACGTGATATTTTTTAGATTTCAAAAGTTAAATAAATATTTACTTAATTACTAATAATCTTTTATATGCCTTATTATTATTTTGAATTGTTAAATATTGTGATTTATAGTCCATCCAGACTATTTTACATCTTGTGTCAAATAATCCTTATTTATTGATCCCAATTTGTTTTTGTTTTGTTTCAATTCATCTCCTTATTTTTTTCAATTAAGGATAAAAATGAAATCTCATAATTAATTATTTCTTAATTTTTTAAAAATGACAATCAATCTTGGATTAAGAAGTAGGAGAAATAAGATAAATTGAAGGGGGTAATATTTTTTTTTTACATAATTTTTAAATACAAAAATTTTAGTATAAATTTTATAGCATTAAAAGCTAATTATTATATTAGAGATTATGAAAAAAAATAATAAGAAGTGTATTTATGTAATTAAAGTAGTAGTATTTATCATCTTTCATGTAAATACAATTTGTTTTGTTTTGTTTTATGATTTTGAAATCAGGTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATGGTAAGACTTGCAAAATACTATTCTATTCAGCAACAGAATAAATAATCTAGGCCAGAAATTTATCTGTTTAAATGTAATTTTCATTATTATGAGATTTAATGAAGTAAAATAAATTATAAATTTAAACACATGTCATGTATGTATTGACTTGGTGTAAACATTCGGGGTGTGTTTGGTATGAAGGAAAATGTTTTATAGGAAACAAGTAGATATTTGATTTATTTTCTCTTGTTTAATTTGTGAGTAGAAAATATTTTTTGAAAAATATTTAGTGTTTGATTTTTGAATAAAATGTTTTTGAGAAATATCTTTTATTTTTTACTAAAGTATAAAATAATTTTTGAAGTTGAAATTAGTTTTTAGAAACAAACTTAAAATTCTTTTTCTTTGTGGGTGGGGGGCTAGTAAGGGATAGTTGTAGGGTGGGGGGAATCTAGGGTAGGGATGAAAAAATAAAATTTGAAGTTTAAAATATGTTTTAAGAACAAATTCAATTTCTTTTTGGGTTGTAGGGGGGACTGGGGTAGTAGGGGTGAGTGGGTGGGGGGTCGGAGAGCACGGGGTAGTTTAAAAATGAATTTTAAAAGTTTGAAAATATTTTTAAAAAACTAACTTTAATTATTTTTTATTGGATGGGGGTGGTAGGGGGATCAACGATGGGTGAAAAAAATAAATTTTGAAGTTAAAAATATTTTTTTTAAAATAAACTTAAGTTTTTTAGAGATAGGGGGGCTGGTAGGGGTGGATGGGTGGGAGGCAGGTAGGAGGGTGGTTTGGGGGTCTGGTAGGATGGGGTTGGGGTTGGAAGAAAGTTTTGAAAAAAGTTTATCTTAAATTTGAGGAAAATAAGTTAATTTGAAAAACATTTTTCAAAATATTTGACCAAATCAAACATGAGAAAATTGAAAAAATATTTTCTTTCATACCAAACACACCTTCGGTGCGGATAAATTTTACCCATAATTTAGCTAAATTGTTCTTTTATTTAATATTTCTTTTAGCAAACGTAAAAGAAAAAATATAACAAATAAAATGAAACCAAAAATTCACATTCTCGGCTGCTTCCGGTCCGATAGGTCGGTCGCCCTCTAGCCAGTGACTAACCCAGCTATGGAGCTAGGTGTATACCGCCACGTCGAGACTCTCATTCAAAAGTGCAAATAAGCAAAGAAAATTCTCCGCTCAAACTAATTTCATATTGGTAATATCAATCAATACTTTTTTATACAAATTTATTCAAATTTATATATGGGGATAATTTTAAAATTATTCAATCATATTGAATTGAATAGTATAATCATTTCTTCATTAAATAAAAGAGTGTACTGATAACATTCTTTTTCCCTCAATGAAATGCCTTCACATCACCACATATATCTTTAATCATATATGTAGTAGGTAGTGATACATATAGGCCCATTATAACCCCACTATGATCATCATGTTCTATAGTATCTATATTCTTAAAATAATATAGTATTTTGTTTACATATTAAACACACAAATGAATTATTTTTTACAAAAATATCTTTTTTTTTTCTTTATTTATATCAATTTTACTTTATGTTTTGCGATGAGATGGGACAGGAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGACATTGGGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAGGTCTCTCTCTATTCCTCTTACATACTTTTACACTATCGTAAAATAATATGCAGATATATCCTCTATCATATTTTTGGGATATTGGTACTTCTGTCGTTCAAGAACTAGAACATATACGTCATTCACTCTAACGGCAGACTAAATAAAAACACGTGGCACAATCTTATTCGTCGATATGATATTTAATAAATGTCAGGTCATTGGATAAAGATTACGACATGTGTATGTCCGTTAGTATAAAAAGTATATATGTTCTACTTTTTGGGCATAAGGGGCATCAATATCTCAAAAGTATGATGGAGGGTATCTGCATAATATTTACCATTTTTTCCTTTTGTTTTTGACAATTTATAAGGTAAATTAAAACGGCATACACATCACTCTTTTCAATTTATTTTGTGGATTACACTAAATATATTGCTACTATTAATTTTATTTCATTTATTACTTTACAAAATAAAAAATATCACTAAATTTGTTTTGCTAGGAAATCCACTTTAAAAATGATACTGTTTGATTTTATTAATAAGAAGAACACAAAAATAATCAAAATGAATTGAGAAATAATATATGTATAAATTTTATAATTACTTATATATTATTCACAATAAAATATAAATATACTGTTAAATTTTAATTAACTTAAAATTTTTATTTTTATCATTTTTTCAAGTGCAATACTTAAATTTTCGAGTATAATGACTTTAGTATTGATTAACTAAATCACTTTGTTCGTATAATAATAATTTTAGTATAGTTTAATTAAATTCATAATAACTTTCTTGTAGATTTTTCGTGTACTAGATGTTTGTGATGTGTATGCCATCTACAAACTTTTACTTTCAAACAAAAAAAAACTAAAAAATTCAAATCAAACCAAATCGACGATTATTTTTTATTTGATTTTAAAAATTCAAAAATCAATAAAATTGATTTTGAAAATGATTAATCTTGAACATTTGACTTTTGTTTTTCTCTCTCTTTATATATATAATTATGAATTTAAATAAATTATTTTCTAAATGTTGACAGGTTGATGAATCACTAAG</genome_strand>
        <mrna_strand>TAAAAACTTAGAAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGACATTGGGGTTTCTTTGAAAGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAA........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGAATCACTAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E267847" ref_strand="+" ref_description="SGN-E267847 [cLEI-12-E10]">
      <seq>aaaaacttagaaatatggctagtgagaaggaaaaaattaaaattacaagtgataagtataggctattcttgcatgaagatcaagctgctgctgaaggaaccatccaatggagacatggtgatgctccaagttatggaagtgttaataaactctttgaagaaggaacgactaaggtttggccagaaggatctcttgaagaaacagtacaaaatgctataaaatcatgggaaatggaactttcacataagactagagtaaaagactttacgacaattaatcctcaaaaattcaagctcttcgtaaatggaagagacggattgtccgcggaagagacgttgaaagtgggaagctacaatgcgctattgaagagttcaatgccaaatgaattcaaatattacaaagcagatgaagagacatttgaatcatcccacaatgcttttagatcagctttgccaagaagatttgcttgggaagtgatcagtgtatacacagggccac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="40951" stop="44173"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41251" g_stop="41423" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="173" r_length="173" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41424" i_stop="41961" i_length="538">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41962" g_stop="42094" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="174" r_stop="306" r_length="133" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42095" i_stop="43681" i_length="1587">
            <donor d_prob="0.984" d_score="0.98"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43682" g_stop="43873" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="307" r_stop="498" r_length="192" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E267847" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>498</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267847" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41251" e_stop="41423"/>
          <exon e_start="41962" e_stop="42094"/>
          <exon e_start="43682" e_stop="43873"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAACTTAGAAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAGGTTTGTGCATATGTATTTCTTTCGTCCTAATTTACGTGATATTTTTTAGATTTCAAAAGTTAAATAAATATTTACTTAATTACTAATAATCTTTTATATGCCTTATTATTATTTTGAATTGTTAAATATTGTGATTTATAGTCCATCCAGACTATTTTACATCTTGTGTCAAATAATCCTTATTTATTGATCCCAATTTGTTTTTGTTTTGTTTCAATTCATCTCCTTATTTTTTTCAATTAAGGATAAAAATGAAATCTCATAATTAATTATTTCTTAATTTTTTAAAAATGACAATCAATCTTGGATTAAGAAGTAGGAGAAATAAGATAAATTGAAGGGGGTAATATTTTTTTTTTACATAATTTTTAAATACAAAAATTTTAGTATAAATTTTATAGCATTAAAAGCTAATTATTATATTAGAGATTATGAAAAAAAATAATAAGAAGTGTATTTATGTAATTAAAGTAGTAGTATTTATCATCTTTCATGTAAATACAATTTGTTTTGTTTTGTTTTATGATTTTGAAATCAGGTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATGGTAAGACTTGCAAAATACTATTCTATTCAGCAACAGAATAAATAATCTAGGCCAGAAATTTATCTGTTTAAATGTAATTTTCATTATTATGAGATTTAATGAAGTAAAATAAATTATAAATTTAAACACATGTCATGTATGTATTGACTTGGTGTAAACATTCGGGGTGTGTTTGGTATGAAGGAAAATGTTTTATAGGAAACAAGTAGATATTTGATTTATTTTCTCTTGTTTAATTTGTGAGTAGAAAATATTTTTTGAAAAATATTTAGTGTTTGATTTTTGAATAAAATGTTTTTGAGAAATATCTTTTATTTTTTACTAAAGTATAAAATAATTTTTGAAGTTGAAATTAGTTTTTAGAAACAAACTTAAAATTCTTTTTCTTTGTGGGTGGGGGGCTAGTAAGGGATAGTTGTAGGGTGGGGGGAATCTAGGGTAGGGATGAAAAAATAAAATTTGAAGTTTAAAATATGTTTTAAGAACAAATTCAATTTCTTTTTGGGTTGTAGGGGGGACTGGGGTAGTAGGGGTGAGTGGGTGGGGGGTCGGAGAGCACGGGGTAGTTTAAAAATGAATTTTAAAAGTTTGAAAATATTTTTAAAAAACTAACTTTAATTATTTTTTATTGGATGGGGGTGGTAGGGGGATCAACGATGGGTGAAAAAAATAAATTTTGAAGTTAAAAATATTTTTTTTAAAATAAACTTAAGTTTTTTAGAGATAGGGGGGCTGGTAGGGGTGGATGGGTGGGAGGCAGGTAGGAGGGTGGTTTGGGGGTCTGGTAGGATGGGGTTGGGGTTGGAAGAAAGTTTTGAAAAAAGTTTATCTTAAATTTGAGGAAAATAAGTTAATTTGAAAAACATTTTTCAAAATATTTGACCAAATCAAACATGAGAAAATTGAAAAAATATTTTCTTTCATACCAAACACACCTTCGGTGCGGATAAATTTTACCCATAATTTAGCTAAATTGTTCTTTTATTTAATATTTCTTTTAGCAAACGTAAAAGAAAAAATATAACAAATAAAATGAAACCAAAAATTCACATTCTCGGCTGCTTCCGGTCCGATAGGTCGGTCGCCCTCTAGCCAGTGACTAACCCAGCTATGGAGCTAGGTGTATACCGCCACGTCGAGACTCTCATTCAAAAGTGCAAATAAGCAAAGAAAATTCTCCGCTCAAACTAATTTCATATTGGTAATATCAATCAATACTTTTTTATACAAATTTATTCAAATTTATATATGGGGATAATTTTAAAATTATTCAATCATATTGAATTGAATAGTATAATCATTTCTTCATTAAATAAAAGAGTGTACTGATAACATTCTTTTTCCCTCAATGAAATGCCTTCACATCACCACATATATCTTTAATCATATATGTAGTAGGTAGTGATACATATAGGCCCATTATAACCCCACTATGATCATCATGTTCTATAGTATCTATATTCTTAAAATAATATAGTATTTTGTTTACATATTAAACACACAAATGAATTATTTTTTACAAAAATATCTTTTTTTTTTCTTTATTTATATCAATTTTACTTTATGTTTTGCGATGAGATGGGACAGGAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCAC</genome_strand>
        <mrna_strand>AAAAACTTAGAAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAACGACTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTACGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTGCCAAGAAGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E574565" ref_strand="+" ref_description="SGN-E574565 [34053]">
      <seq>ttttagagagagaaaagtattaaaacttgaagtagttgaaatatggctggtgagaaggaaacaattaaagttgtaagtgataagtataggctattcttgcatgaagatcaagctgctgctgcaggaaccatccagtggagacatggtgatcctccaagctatgaaagtgttaataagctctttgaacaaggaaggaccaaggtttggccagaaggatctcttgaagaaacagtacaaaatgctataaaatcatgggaaatggaactttcacacaagactcgcataaaagactttaggacaattaatcctgaaaaattcaagctctttgtaaatggaagagatggattgtcagccgaagagacattaaaagtgggaagctacaatgcgctattgaagagttcaatgccagatgaattcaaatattacaaagcagatgaagagacctttgaatcatctcacaatgcttttagatcagcttttccaagaggatttgcttgggaagtgatcaatgtatattcaggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="40942" stop="44169"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41261" g_stop="41423" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="201" r_length="163" r_score="0.920"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41424" i_stop="41961" i_length="538">
            <donor d_prob="0.984" d_score="0.90"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41962" g_stop="42094" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="334" r_length="133" r_score="0.955"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42095" i_stop="43681" i_length="1587">
            <donor d_prob="0.984" d_score="0.96"/>
            <acceptor a_prob="0.960" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43682" g_stop="43869" g_length="188"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="522" r_length="188" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E574565" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574565" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41261" e_stop="41423"/>
          <exon e_start="41962" e_stop="42094"/>
          <exon e_start="43682" e_stop="43869"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAGGTTTGTGCATATGTATTTCTTTCGTCCTAATTTACGTGATATTTTTTAGATTTCAAAAGTTAAATAAATATTTACTTAATTACTAATAATCTTTTATATGCCTTATTATTATTTTGAATTGTTAAATATTGTGATTTATAGTCCATCCAGACTATTTTACATCTTGTGTCAAATAATCCTTATTTATTGATCCCAATTTGTTTTTGTTTTGTTTCAATTCATCTCCTTATTTTTTTCAATTAAGGATAAAAATGAAATCTCATAATTAATTATTTCTTAATTTTTTAAAAATGACAATCAATCTTGGATTAAGAAGTAGGAGAAATAAGATAAATTGAAGGGGGTAATATTTTTTTTTTACATAATTTTTAAATACAAAAATTTTAGTATAAATTTTATAGCATTAAAAGCTAATTATTATATTAGAGATTATGAAAAAAAATAATAAGAAGTGTATTTATGTAATTAAAGTAGTAGTATTTATCATCTTTCATGTAAATACAATTTGTTTTGTTTTGTTTTATGATTTTGAAATCAGGTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATGGTAAGACTTGCAAAATACTATTCTATTCAGCAACAGAATAAATAATCTAGGCCAGAAATTTATCTGTTTAAATGTAATTTTCATTATTATGAGATTTAATGAAGTAAAATAAATTATAAATTTAAACACATGTCATGTATGTATTGACTTGGTGTAAACATTCGGGGTGTGTTTGGTATGAAGGAAAATGTTTTATAGGAAACAAGTAGATATTTGATTTATTTTCTCTTGTTTAATTTGTGAGTAGAAAATATTTTTTGAAAAATATTTAGTGTTTGATTTTTGAATAAAATGTTTTTGAGAAATATCTTTTATTTTTTACTAAAGTATAAAATAATTTTTGAAGTTGAAATTAGTTTTTAGAAACAAACTTAAAATTCTTTTTCTTTGTGGGTGGGGGGCTAGTAAGGGATAGTTGTAGGGTGGGGGGAATCTAGGGTAGGGATGAAAAAATAAAATTTGAAGTTTAAAATATGTTTTAAGAACAAATTCAATTTCTTTTTGGGTTGTAGGGGGGACTGGGGTAGTAGGGGTGAGTGGGTGGGGGGTCGGAGAGCACGGGGTAGTTTAAAAATGAATTTTAAAAGTTTGAAAATATTTTTAAAAAACTAACTTTAATTATTTTTTATTGGATGGGGGTGGTAGGGGGATCAACGATGGGTGAAAAAAATAAATTTTGAAGTTAAAAATATTTTTTTTAAAATAAACTTAAGTTTTTTAGAGATAGGGGGGCTGGTAGGGGTGGATGGGTGGGAGGCAGGTAGGAGGGTGGTTTGGGGGTCTGGTAGGATGGGGTTGGGGTTGGAAGAAAGTTTTGAAAAAAGTTTATCTTAAATTTGAGGAAAATAAGTTAATTTGAAAAACATTTTTCAAAATATTTGACCAAATCAAACATGAGAAAATTGAAAAAATATTTTCTTTCATACCAAACACACCTTCGGTGCGGATAAATTTTACCCATAATTTAGCTAAATTGTTCTTTTATTTAATATTTCTTTTAGCAAACGTAAAAGAAAAAATATAACAAATAAAATGAAACCAAAAATTCACATTCTCGGCTGCTTCCGGTCCGATAGGTCGGTCGCCCTCTAGCCAGTGACTAACCCAGCTATGGAGCTAGGTGTATACCGCCACGTCGAGACTCTCATTCAAAAGTGCAAATAAGCAAAGAAAATTCTCCGCTCAAACTAATTTCATATTGGTAATATCAATCAATACTTTTTTATACAAATTTATTCAAATTTATATATGGGGATAATTTTAAAATTATTCAATCATATTGAATTGAATAGTATAATCATTTCTTCATTAAATAAAAGAGTGTACTGATAACATTCTTTTTCCCTCAATGAAATGCCTTCACATCACCACATATATCTTTAATCATATATGTAGTAGGTAGTGATACATATAGGCCCATTATAACCCCACTATGATCATCATGTTCTATAGTATCTATATTCTTAAAATAATATAGTATTTTGTTTACATATTAAACACACAAATGAATTATTTTTTACAAAAATATCTTTTTTTTTTCTTTATTTATATCAATTTTACTTTATGTTTTGCGATGAGATGGGACAGGAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGG</genome_strand>
        <mrna_strand>AAATATGGCTGGTGAGAAGGAAACAATTAAAGTTGTAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGCAGGAACCATCCAGTGGAGACATGGTGATCCTCCAAGCTATGAAAGTGTTAATAAGCTCTTTGAACAAGGAAGGACCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACACAAGACTCGCATAAAAGACTTTAGGACAATTAATCCTGAAAAATTCAAGCTCTTTGTAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGATGGATTGTCAGCCGAAGAGACATTAAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAGATGAATTCAAATATTACAAAGCAGATGAAGAGACCTTTGAATCATCTCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAATGTATATTCAGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E339470" ref_strand="+" ref_description="SGN-E339470 [cTOF-4-H18]">
      <seq>aagctgctgctgaaggaaccatccaatggagacatggtgatgctccaagttatggaagtgttaataaactctttgaagaaggaaggactaaggtttggccagaaggatctcttgaagaaacagtacaaaatgctataaaatcatgggaaatggaactttcacataagactagagtaaaagactttaggacaattaatcctcaaaaattcaagctcttcgtaaatggaagagacggattgtccgcggaagagacgttgaaagtgggaagctacaatgcgctattgaagagttcaatgccaaatgaattcaaatattacaaagcagatgaagagacatttgaatcatcccacaatgcttttagatcagcttttccaagaggatttgcttgggaagtgatcagtgtatacacagggccaccaattattacatacaaattcagaacattgnggtttctttgaaggtccatttaaaggacatgcccctactggcaacatggtccaattctatggccttggtatattgaaggttgatgaatcactaagagcagaggatgtagaggtatattatgatccaacggaaactttttggtgaactactcaaaggaccaaaaatttctgaatctaatgttgagcaccacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="41032" stop="45425"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41332" g_stop="41423" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41424" i_stop="41961" i_length="538">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41962" g_stop="42094" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="225" r_length="133" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="42095" i_stop="43681" i_length="1587">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43682" g_stop="43980" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="226" r_stop="525" r_length="300" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43981" i_stop="45012" i_length="1032">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="45013" g_stop="45125" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="526" r_stop="639" r_length="114" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E339470" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>637</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339470" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41332" e_stop="41423"/>
          <exon e_start="41962" e_stop="42094"/>
          <exon e_start="43682" e_stop="43980"/>
          <exon e_start="45013" e_stop="45125"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAGGTTTGTGCATATGTATTTCTTTCGTCCTAATTTACGTGATATTTTTTAGATTTCAAAAGTTAAATAAATATTTACTTAATTACTAATAATCTTTTATATGCCTTATTATTATTTTGAATTGTTAAATATTGTGATTTATAGTCCATCCAGACTATTTTACATCTTGTGTCAAATAATCCTTATTTATTGATCCCAATTTGTTTTTGTTTTGTTTCAATTCATCTCCTTATTTTTTTCAATTAAGGATAAAAATGAAATCTCATAATTAATTATTTCTTAATTTTTTAAAAATGACAATCAATCTTGGATTAAGAAGTAGGAGAAATAAGATAAATTGAAGGGGGTAATATTTTTTTTTTACATAATTTTTAAATACAAAAATTTTAGTATAAATTTTATAGCATTAAAAGCTAATTATTATATTAGAGATTATGAAAAAAAATAATAAGAAGTGTATTTATGTAATTAAAGTAGTAGTATTTATCATCTTTCATGTAAATACAATTTGTTTTGTTTTGTTTTATGATTTTGAAATCAGGTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATGGTAAGACTTGCAAAATACTATTCTATTCAGCAACAGAATAAATAATCTAGGCCAGAAATTTATCTGTTTAAATGTAATTTTCATTATTATGAGATTTAATGAAGTAAAATAAATTATAAATTTAAACACATGTCATGTATGTATTGACTTGGTGTAAACATTCGGGGTGTGTTTGGTATGAAGGAAAATGTTTTATAGGAAACAAGTAGATATTTGATTTATTTTCTCTTGTTTAATTTGTGAGTAGAAAATATTTTTTGAAAAATATTTAGTGTTTGATTTTTGAATAAAATGTTTTTGAGAAATATCTTTTATTTTTTACTAAAGTATAAAATAATTTTTGAAGTTGAAATTAGTTTTTAGAAACAAACTTAAAATTCTTTTTCTTTGTGGGTGGGGGGCTAGTAAGGGATAGTTGTAGGGTGGGGGGAATCTAGGGTAGGGATGAAAAAATAAAATTTGAAGTTTAAAATATGTTTTAAGAACAAATTCAATTTCTTTTTGGGTTGTAGGGGGGACTGGGGTAGTAGGGGTGAGTGGGTGGGGGGTCGGAGAGCACGGGGTAGTTTAAAAATGAATTTTAAAAGTTTGAAAATATTTTTAAAAAACTAACTTTAATTATTTTTTATTGGATGGGGGTGGTAGGGGGATCAACGATGGGTGAAAAAAATAAATTTTGAAGTTAAAAATATTTTTTTTAAAATAAACTTAAGTTTTTTAGAGATAGGGGGGCTGGTAGGGGTGGATGGGTGGGAGGCAGGTAGGAGGGTGGTTTGGGGGTCTGGTAGGATGGGGTTGGGGTTGGAAGAAAGTTTTGAAAAAAGTTTATCTTAAATTTGAGGAAAATAAGTTAATTTGAAAAACATTTTTCAAAATATTTGACCAAATCAAACATGAGAAAATTGAAAAAATATTTTCTTTCATACCAAACACACCTTCGGTGCGGATAAATTTTACCCATAATTTAGCTAAATTGTTCTTTTATTTAATATTTCTTTTAGCAAACGTAAAAGAAAAAATATAACAAATAAAATGAAACCAAAAATTCACATTCTCGGCTGCTTCCGGTCCGATAGGTCGGTCGCCCTCTAGCCAGTGACTAACCCAGCTATGGAGCTAGGTGTATACCGCCACGTCGAGACTCTCATTCAAAAGTGCAAATAAGCAAAGAAAATTCTCCGCTCAAACTAATTTCATATTGGTAATATCAATCAATACTTTTTTATACAAATTTATTCAAATTTATATATGGGGATAATTTTAAAATTATTCAATCATATTGAATTGAATAGTATAATCATTTCTTCATTAAATAAAAGAGTGTACTGATAACATTCTTTTTCCCTCAATGAAATGCCTTCACATCACCACATATATCTTTAATCATATATGTAGTAGGTAGTGATACATATAGGCCCATTATAACCCCACTATGATCATCATGTTCTATAGTATCTATATTCTTAAAATAATATAGTATTTTGTTTACATATTAAACACACAAATGAATTATTTTTTACAAAAATATCTTTTTTTTTTCTTTATTTATATCAATTTTACTTTATGTTTTGCGATGAGATGGGACAGGAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAG-ACATTGGGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAGGTCTCTCTCTATTCCTCTTACATACTTTTACACTATCGTAAAATAATATGCAGATATATCCTCTATCATATTTTTGGGATATTGGTACTTCTGTCGTTCAAGAACTAGAACATATACGTCATTCACTCTAACGGCAGACTAAATAAAAACACGTGGCACAATCTTATTCGTCGATATGATATTTAATAAATGTCAGGTCATTGGATAAAGATTACGACATGTGTATGTCCGTTAGTATAAAAAGTATATATGTTCTACTTTTTGGGCATAAGGGGCATCAATATCTCAAAAGTATGATGGAGGGTATCTGCATAATATTTACCATTTTTTCCTTTTGTTTTTGACAATTTATAAGGTAAATTAAAACGGCATACACATCACTCTTTTCAATTTATTTTGTGGATTACACTAAATATATTGCTACTATTAATTTTATTTCATTTATTACTTTACAAAATAAAAAATATCACTAAATTTGTTTTGCTAGGAAATCCACTTTAAAAATGATACTGTTTGATTTTATTAATAAGAAGAACACAAAAATAATCAAAATGAATTGAGAAATAATATATGTATAAATTTTATAATTACTTATATATTATTCACAATAAAATATAAATATACTGTTAAATTTTAATTAACTTAAAATTTTTATTTTTATCATTTTTTCAAGTGCAATACTTAAATTTTCGAGTATAATGACTTTAGTATTGATTAACTAAATCACTTTGTTCGTATAATAATAATTTTAGTATAGTTTAATTAAATTCATAATAACTTTCTTGTAGATTTTTCGTGTACTAGATGTTTGTGATGTGTATGCCATCTACAAACTTTTACTTTCAAACAAAAAAAAACTAAAAAATTCAAATCAAACCAAATCGACGATTATTTTTTATTTGATTTTAAAAATTCAAAAATCAATAAAATTGATTTTGAAAATGATTAATCTTGAACATTTGACTTTTGTTTTTCTCTCTCTTTATATATATAATTATGAATTTAAATAAATTATTTTCTAAATGTTGACAGGTTGATGAATCACTAAGAGCAGAGGATGTAGAGGTATATTATGATCCAACGG-AACTTTTTGGTGAACTACTCAAAGGACCAAAAATTTCTGAATCTAATGTTGAGCACCACTA</genome_strand>
        <mrna_strand>AAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGAACATTGNGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGAATCACTAAGAGCAGAGGATGTAGAGGTATATTATGATCCAACGGAAACTTTTTGGTGAACTACTCAAAGGACCAAAAATTTCTGAATCTAATGTTGAGCACCACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E537994" ref_strand="-" ref_description="SGN-E537994 [TUS-56-O5]">
      <seq>aaaatgctataaaatcatgggaaatggaactttcacataagactagagtaaaagactttaggacaattaatcctcaaaaattcaagctcttcgtaaatggaagagacggattgtccgcggaagagacgttgaaagtgggaagctacaatgcgctattgaagagttcaatgccaaatgaattcaaatattacaaagcagatgaagagacatttgaatcatcccacaatgcttttagatcagcttttccaagaggatttgcttgggaagtgatcagtgtatacacagggccaccaattattacatacaaattcagacattggggtttctttgaaggtccatttaaaggacatgcccctactggcaacatggtccaattctatggccttggtatattgaaggttgatgaatcactaagagcagaggatgtagaggtatattatgatccaacggaactttttggtgaactactcaaaggaccaaaaatttctgaatctaatgttgagcaccactagtcatggtttattgattttatgaagtttttttttttatgttttttcataaaataaactttctctgtttggatcgcacaatattacaatacaatgttacaaagtttgtttggattgatttaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="41696" stop="45545"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41996" g_stop="42094" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="99" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42095" i_stop="43681" i_length="1587">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43682" g_stop="43980" g_length="299"/>
          <reference_exon_boundary r_type="cDNA" r_start="100" r_stop="398" r_length="299" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43981" i_stop="45012" i_length="1032">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45013" g_stop="45253" g_length="241"/>
          <reference_exon_boundary r_type="cDNA" r_start="399" r_stop="639" r_length="241" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E537994" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>639</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E537994" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="41996" e_stop="42094"/>
          <exon e_start="43682" e_stop="43980"/>
          <exon e_start="45013" e_stop="45253"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATGGTAAGACTTGCAAAATACTATTCTATTCAGCAACAGAATAAATAATCTAGGCCAGAAATTTATCTGTTTAAATGTAATTTTCATTATTATGAGATTTAATGAAGTAAAATAAATTATAAATTTAAACACATGTCATGTATGTATTGACTTGGTGTAAACATTCGGGGTGTGTTTGGTATGAAGGAAAATGTTTTATAGGAAACAAGTAGATATTTGATTTATTTTCTCTTGTTTAATTTGTGAGTAGAAAATATTTTTTGAAAAATATTTAGTGTTTGATTTTTGAATAAAATGTTTTTGAGAAATATCTTTTATTTTTTACTAAAGTATAAAATAATTTTTGAAGTTGAAATTAGTTTTTAGAAACAAACTTAAAATTCTTTTTCTTTGTGGGTGGGGGGCTAGTAAGGGATAGTTGTAGGGTGGGGGGAATCTAGGGTAGGGATGAAAAAATAAAATTTGAAGTTTAAAATATGTTTTAAGAACAAATTCAATTTCTTTTTGGGTTGTAGGGGGGACTGGGGTAGTAGGGGTGAGTGGGTGGGGGGTCGGAGAGCACGGGGTAGTTTAAAAATGAATTTTAAAAGTTTGAAAATATTTTTAAAAAACTAACTTTAATTATTTTTTATTGGATGGGGGTGGTAGGGGGATCAACGATGGGTGAAAAAAATAAATTTTGAAGTTAAAAATATTTTTTTTAAAATAAACTTAAGTTTTTTAGAGATAGGGGGGCTGGTAGGGGTGGATGGGTGGGAGGCAGGTAGGAGGGTGGTTTGGGGGTCTGGTAGGATGGGGTTGGGGTTGGAAGAAAGTTTTGAAAAAAGTTTATCTTAAATTTGAGGAAAATAAGTTAATTTGAAAAACATTTTTCAAAATATTTGACCAAATCAAACATGAGAAAATTGAAAAAATATTTTCTTTCATACCAAACACACCTTCGGTGCGGATAAATTTTACCCATAATTTAGCTAAATTGTTCTTTTATTTAATATTTCTTTTAGCAAACGTAAAAGAAAAAATATAACAAATAAAATGAAACCAAAAATTCACATTCTCGGCTGCTTCCGGTCCGATAGGTCGGTCGCCCTCTAGCCAGTGACTAACCCAGCTATGGAGCTAGGTGTATACCGCCACGTCGAGACTCTCATTCAAAAGTGCAAATAAGCAAAGAAAATTCTCCGCTCAAACTAATTTCATATTGGTAATATCAATCAATACTTTTTTATACAAATTTATTCAAATTTATATATGGGGATAATTTTAAAATTATTCAATCATATTGAATTGAATAGTATAATCATTTCTTCATTAAATAAAAGAGTGTACTGATAACATTCTTTTTCCCTCAATGAAATGCCTTCACATCACCACATATATCTTTAATCATATATGTAGTAGGTAGTGATACATATAGGCCCATTATAACCCCACTATGATCATCATGTTCTATAGTATCTATATTCTTAAAATAATATAGTATTTTGTTTACATATTAAACACACAAATGAATTATTTTTTACAAAAATATCTTTTTTTTTTCTTTATTTATATCAATTTTACTTTATGTTTTGCGATGAGATGGGACAGGAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGACATTGGGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAGGTCTCTCTCTATTCCTCTTACATACTTTTACACTATCGTAAAATAATATGCAGATATATCCTCTATCATATTTTTGGGATATTGGTACTTCTGTCGTTCAAGAACTAGAACATATACGTCATTCACTCTAACGGCAGACTAAATAAAAACACGTGGCACAATCTTATTCGTCGATATGATATTTAATAAATGTCAGGTCATTGGATAAAGATTACGACATGTGTATGTCCGTTAGTATAAAAAGTATATATGTTCTACTTTTTGGGCATAAGGGGCATCAATATCTCAAAAGTATGATGGAGGGTATCTGCATAATATTTACCATTTTTTCCTTTTGTTTTTGACAATTTATAAGGTAAATTAAAACGGCATACACATCACTCTTTTCAATTTATTTTGTGGATTACACTAAATATATTGCTACTATTAATTTTATTTCATTTATTACTTTACAAAATAAAAAATATCACTAAATTTGTTTTGCTAGGAAATCCACTTTAAAAATGATACTGTTTGATTTTATTAATAAGAAGAACACAAAAATAATCAAAATGAATTGAGAAATAATATATGTATAAATTTTATAATTACTTATATATTATTCACAATAAAATATAAATATACTGTTAAATTTTAATTAACTTAAAATTTTTATTTTTATCATTTTTTCAAGTGCAATACTTAAATTTTCGAGTATAATGACTTTAGTATTGATTAACTAAATCACTTTGTTCGTATAATAATAATTTTAGTATAGTTTAATTAAATTCATAATAACTTTCTTGTAGATTTTTCGTGTACTAGATGTTTGTGATGTGTATGCCATCTACAAACTTTTACTTTCAAACAAAAAAAAACTAAAAAATTCAAATCAAACCAAATCGACGATTATTTTTTATTTGATTTTAAAAATTCAAAAATCAATAAAATTGATTTTGAAAATGATTAATCTTGAACATTTGACTTTTGTTTTTCTCTCTCTTTATATATATAATTATGAATTTAAATAAATTATTTTCTAAATGTTGACAGGTTGATGAATCACTAAGAGCAGAGGATGTAGAGGTATATTATGATCCAACGGAACTTTTTGGTGAACTACTCAAAGGACCAAAAATTTCTGAATCTAATGTTGAGCACCACTAGTCATGGTTTATTGATTTTATGAAGTTTTTTTTTTTATGTTTTTTCATAAAATAAACTTTCTCTGTTTGGATCGCACAATATTACAATACAATGTTACAAAGTTTGTTTGGATTGATTTATTTGAAGT</genome_strand>
        <mrna_strand>AAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGACATTGGGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGATGAATCACTAAGAGCAGAGGATGTAGAGGTATATTATGATCCAACGGAACTTTTTGGTGAACTACTCAAAGGACCAAAAATTTCTGAATCTAATGTTGAGCACCACTAGTCATGGTTTATTGATTTTATGAAGTTTTTTTTTTTATGTTTTTTCATAAAATAAACTTTCTCTGTTTGGATCGCACAATATTACAATACAATGTTACAAAGTTTGTTTGGATTGATTTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E339727" ref_strand="+" ref_description="SGN-E339727 [cTOE-16-M14]">
      <seq>tccgtcatatttttcttcgccctctgacagatgggctttcagcagttcaggagtgtacgtgggtcttcaagctgccagttatattgcatcaaatacattttcactggatgtgtccggtcctgacttctacaatacagcacgccttgcccctaattccctcaaatattatgggctttgcctacaaggaggtagctacagagtgcgccttcactttgctgaaataatgttttctaatgactcaacatatagcagccttggaaggcggatatttgatgtagcaatacaagggagagtagttttgagggatttcaacattatggaggaagctaacggtgttgggaaagtcattaccaaggactttcctgatgttactgttagtagcactctggagattcatttgtattggaccgggaaggggactaacgctattccagacagaggtgtatatggaccactgatttcagctatcacagtgacaccaaactttagagttgacactggtagtggcttacctgttggagctgttatcggcattgtactcgcttcaattgtagtgcttctgctagttttatttgctctgtggaagaaaggcatttttggagggaaaaataaccaagaagaattagaactcagagcccttgatttacaaacaggtcattttag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="62178" stop="63996"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62478" g_stop="62763" g_length="286"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="286" r_length="286" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62764" i_stop="62903" i_length="140">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62904" g_stop="63098" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="481" r_length="195" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63099" i_stop="63182" i_length="84">
            <donor d_prob="0.572" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63183" g_stop="63330" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="626" r_length="145" r_score="0.865"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63331" i_stop="63659" i_length="329">
            <donor d_prob="0.996" d_score="0.85"/>
            <acceptor a_prob="0.880" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63660" g_stop="63696" g_length="37"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="663" r_length="37" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E339727" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>666</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E339727" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62478" e_stop="62763"/>
          <exon e_start="62904" e_stop="63098"/>
          <exon e_start="63183" e_stop="63330"/>
          <exon e_start="63660" e_stop="63696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCGTCATATTTTTCTTCGCCCTCTGACAGATGGGCTTTCAGCAGTTCAGGAGTGTACGTGGGTCTTCAAGCTGCCAGTTATATTGCATCAAATACATTTTCACTGGATGTGTCCGGTCCTGACTTCTACAATACAGCACGCCTTGCCCCTAATTCCCTCAAATATTATGGGCTTTGCCTACAAGGAGGTAGCTACAGAGTGCGCCTTCACTTTGCTGAAATAATGTTTTCTAATGACTCAACATATAGCAGCCTTGGAAGGCGGATATTTGATGTAGCAATACAAGTAAGTTTGAGGCCTAACTTCTTTTGTAAATAATATGTAATCTAGAAAGTTGATTTATTTAGTTCTGATATGATCGGCAGCTTTCCAATTTAATATTTAAGGTACCAATTTTAATGTGGTATATTTTGATTTCTTACCAGGGGAGAGTAGTTTTGAGGGATTTCAACATTATGGAGGAAGCTAACGGTGTTGGGAAAGTCATTACCAAGGACTTTCCTGATGTTACTGTTAGTAGCACTCTGGAGATTCATTTGTATTGGACCGGGAAGGGGACTAACGCTATTCCAGACAGAGGTGTATATGGACCACTGATTTCAGCTATCACAGTGACCCCAGTTCGTATATCTCTGCCGATAGACCTTTAAACTTATTTTCCCCACAAACTTATTTTAATAAATTTCCCACTTTGTTTGTTGCAAAACTTTAAAGTTGAACACGGGAAGTGGGCTTTACCTGGTTGAAGCTGTTTAACCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTA-TTGCTCTGTGG-AGAAAGGCA-TCTTGGAGGGAGAAATAGCCAAGAAGAATTAGGTAATACATATCTCAAAGACTTTATTCACTCTCTATATTTGATAATATGGCGATAGTTCTGTTGTGATAATCAGAATCATTTACGAGATTTCTAGCCGTGAGATACAAATAATTATCTCCCTGTAATTGACCGGCATTGAGATGATTGTTCTGTTGGTGGATCGACATCATGTCGTATCATAGATACTTAGCACACGATTAAATGCTCATGACGTCTTAAACTGTCTTCGTCATACAGATGTTCATTCTTTTAAAAGTTGTTTTTCATCATACAGATGTTTTAGAAGATCTATATATACTGACGTTTGCAATGTTCATCTCGTTTACAGAACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAG</genome_strand>
        <mrna_strand>TCCGTCATATTTTTCTTCGCCCTCTGACAGATGGGCTTTCAGCAGTTCAGGAGTGTACGTGGGTCTTCAAGCTGCCAGTTATATTGCATCAAATACATTTTCACTGGATGTGTCCGGTCCTGACTTCTACAATACAGCACGCCTTGCCCCTAATTCCCTCAAATATTATGGGCTTTGCCTACAAGGAGGTAGCTACAGAGTGCGCCTTCACTTTGCTGAAATAATGTTTTCTAATGACTCAACATATAGCAGCCTTGGAAGGCGGATATTTGATGTAGCAATACAA............................................................................................................................................GGGAGAGTAGTTTTGAGGGATTTCAACATTATGGAGGAAGCTAACGGTGTTGGGAAAGTCATTACCAAGGACTTTCCTGATGTTACTGTTAGTAGCACTCTGGAGATTCATTTGTATTGGACCGGGAAGGGGACTAACGCTATTCCAGACAGAGGTGTATATGGACCACTGATTTCAGCTATCACAGTGACACCA....................................................................................AACTTTAGAGTTG-ACACTGGTAGT-GGC-TTACCT-GTTGGAGCTG-TT-ATCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTATTTGCTCTGTGGAAGAAAGGCATTTTTGGAGGGAAAAATAACCAAGAAGAATTAG.........................................................................................................................................................................................................................................................................................................................................AACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E348646" ref_strand="+" ref_description="SGN-E348646 [cTOF-30-B21]">
      <seq>gctaacggtgttgggaaagtcattaccaaggactttcctgatgttactgttagtagcactctggagattcatttgtattggaccgggaaggggactaacgctattccagacagaggtgtatatggaccactgatttcagctatcacagtgacaccaaactttagagttgacactggtagtggcttacctgttggagctgttatcggcattgtactcgcttcaattgtagtgcttctgctagttttatttgctctgtggaagaaaggcatttttggagggaaaaataaccaagaagaattagaactcagagcccttgatttacaaacaggtcattttagacttagacaaattaaagctgctactaataactttgatcctgccaacaaaattggtgaaggagggtttggaccagttacaagggtgtactcgccgatggtgccatcatagctgttaagcagctgtcttccaagtcaaagcaaggaaatcgtgaatttgtcaatgagataggcatgatttcagctctacaacacccaaaccttgtcaagcntttacggttgttgcatagaagggaaccagttattagtgatatacgaatacatggaaaataactgtcttgctcgagctctctttggccgtgacgatcagagattaaacatagactgggcaaccagaaaaaggatatgctcaggaatagcaaaagggttagcttacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="62643" stop="64633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62943" g_stop="63098" g_length="156"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="156" r_length="156" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63099" i_stop="63182" i_length="84">
            <donor d_prob="0.572" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63183" g_stop="63330" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="157" r_stop="301" r_length="145" r_score="0.865"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63331" i_stop="63659" i_length="329">
            <donor d_prob="0.996" d_score="0.85"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63660" g_stop="63778" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="419" r_length="118" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63779" i_stop="63956" i_length="178">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63957" g_stop="64167" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="420" r_stop="631" r_length="212" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64168" i_stop="64252" i_length="85">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64253" g_stop="64333" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="712" r_length="81" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E348646" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348646" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62943" e_stop="63098"/>
          <exon e_start="63183" e_stop="63330"/>
          <exon e_start="63660" e_stop="63778"/>
          <exon e_start="63957" e_stop="64167"/>
          <exon e_start="64253" e_stop="64333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTAACGGTGTTGGGAAAGTCATTACCAAGGACTTTCCTGATGTTACTGTTAGTAGCACTCTGGAGATTCATTTGTATTGGACCGGGAAGGGGACTAACGCTATTCCAGACAGAGGTGTATATGGACCACTGATTTCAGCTATCACAGTGACCCCAGTTCGTATATCTCTGCCGATAGACCTTTAAACTTATTTTCCCCACAAACTTATTTTAATAAATTTCCCACTTTGTTTGTTGCAAAACTTTAAAGTTGAACACGGGAAGTGGGCTTTACCTGGTTGAAGCTGTTTAACCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTA-TTGCTCTGTGG-AGAAAGGCA-TCTTGGAGGGAGAAATAGCCAAGAAGAATTAGGTAATACATATCTCAAAGACTTTATTCACTCTCTATATTTGATAATATGGCGATAGTTCTGTTGTGATAATCAGAATCATTTACGAGATTTCTAGCCGTGAGATACAAATAATTATCTCCCTGTAATTGACCGGCATTGAGATGATTGTTCTGTTGGTGGATCGACATCATGTCGTATCATAGATACTTAGCACACGATTAAATGCTCATGACGTCTTAAACTGTCTTCGTCATACAGATGTTCATTCTTTTAAAAGTTGTTTTTCATCATACAGATGTTTTAGAAGATCTATATATACTGACGTTTGCAATGTTCATCTCGTTTACAGAACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAGACTTAGACAAATTAAAGCTGCTACTAATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAGGTATCAATTCTCTATCCATACTGATTTTGCATAAGGACAGCTTGCGGTTTTTTGGTGATATTTCCTACTGGTTATCCTCGATGTCATGTTTATAGGAAAAATAGAGTAGTAATAATTGAAGTAACTCATATCCTTCTTCTGTCTGTAATATGATTGTTGTGAATATTGCTATCTGTAGGGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGC-TTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTGGTAATGCTTCGCAACAACATTTTAAGAATCGTTAATTATGCAGTGATAGTTCATGCTTCACATTCCTCCAATTCTCATTTCTCAGGCCGTGACGATCAGAGATTAAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACC</genome_strand>
        <mrna_strand>GCTAACGGTGTTGGGAAAGTCATTACCAAGGACTTTCCTGATGTTACTGTTAGTAGCACTCTGGAGATTCATTTGTATTGGACCGGGAAGGGGACTAACGCTATTCCAGACAGAGGTGTATATGGACCACTGATTTCAGCTATCACAGTGACACCA....................................................................................AACTTTAGAGTTG-ACACTGGTAGT-GGC-TTACCT-GTTGGAGCTG-TT-ATCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTATTTGCTCTGTGGAAGAAAGGCATTTTTGGAGGGAAAAATAACCAAGAAGAATTAG.........................................................................................................................................................................................................................................................................................................................................AACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAGACTTAGACAAATTAAAGCTGCTACTAATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAG-TTACAAG..................................................................................................................................................................................GGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCNTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTG.....................................................................................GCCGTGACGATCAGAGATTAAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E248305" ref_strand="+" ref_description="SGN-E248305 [cLEG-1-G11]">
      <seq>aaagtcattaccaaggactttcctgatgttactgttagtagcactctggagattcatttgtattggaccgggaaggggactaacgctattccagacagaggtgtatatggaccactgatttcagctatcacagtgacaccaaactttagagttgacactggtagtggcttacctgttggagctgttatcggcattgtactcgcttcaattgtagtgcttctgctagttttatttgctctgtggaagaaaggcatttttggagggaaaaataaccaagaagaattagaactcagagcccttgatttacaaacaggtcattttagacttagacaaattaaagctgctactaataactttgatcctgccaacaaaattggtgaaggagggtttggaccagtttacaagggtgtactcgccgatggtgccatcatagctgttaagcagctgtcttccaagtcaaagcaaggaaatcgtgaatttgtcaatgagataggcatgatttcagctctacaacacccaaaccttgtcaagctttacggttgttgcatagaagggaaccagttattagtgatatacgaatacatggaaaataactgtcttgctcgagctctctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="62658" stop="64465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62958" g_stop="63098" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="141" r_length="141" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63099" i_stop="63182" i_length="84">
            <donor d_prob="0.572" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.82"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63183" g_stop="63330" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="286" r_length="145" r_score="0.865"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63331" i_stop="63659" i_length="329">
            <donor d_prob="0.996" d_score="0.85"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63660" g_stop="63778" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="287" r_stop="405" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="63779" i_stop="63956" i_length="178">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63957" g_stop="64165" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="406" r_stop="614" r_length="209" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E248305" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>617</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E248305" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62958" e_stop="63098"/>
          <exon e_start="63183" e_stop="63330"/>
          <exon e_start="63660" e_stop="63778"/>
          <exon e_start="63957" e_stop="64165"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTCATTACCAAGGACTTTCCTGATGTTACTGTTAGTAGCACTCTGGAGATTCATTTGTATTGGACCGGGAAGGGGACTAACGCTATTCCAGACAGAGGTGTATATGGACCACTGATTTCAGCTATCACAGTGACCCCAGTTCGTATATCTCTGCCGATAGACCTTTAAACTTATTTTCCCCACAAACTTATTTTAATAAATTTCCCACTTTGTTTGTTGCAAAACTTTAAAGTTGAACACGGGAAGTGGGCTTTACCTGGTTGAAGCTGTTTAACCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTA-TTGCTCTGTGG-AGAAAGGCA-TCTTGGAGGGAGAAATAGCCAAGAAGAATTAGGTAATACATATCTCAAAGACTTTATTCACTCTCTATATTTGATAATATGGCGATAGTTCTGTTGTGATAATCAGAATCATTTACGAGATTTCTAGCCGTGAGATACAAATAATTATCTCCCTGTAATTGACCGGCATTGAGATGATTGTTCTGTTGGTGGATCGACATCATGTCGTATCATAGATACTTAGCACACGATTAAATGCTCATGACGTCTTAAACTGTCTTCGTCATACAGATGTTCATTCTTTTAAAAGTTGTTTTTCATCATACAGATGTTTTAGAAGATCTATATATACTGACGTTTGCAATGTTCATCTCGTTTACAGAACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAGACTTAGACAAATTAAAGCTGCTACTAATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAGGTATCAATTCTCTATCCATACTGATTTTGCATAAGGACAGCTTGCGGTTTTTTGGTGATATTTCCTACTGGTTATCCTCGATGTCATGTTTATAGGAAAAATAGAGTAGTAATAATTGAAGTAACTCATATCCTTCTTCTGTCTGTAATATGATTGTTGTGAATATTGCTATCTGTAGGGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTT</genome_strand>
        <mrna_strand>AAAGTCATTACCAAGGACTTTCCTGATGTTACTGTTAGTAGCACTCTGGAGATTCATTTGTATTGGACCGGGAAGGGGACTAACGCTATTCCAGACAGAGGTGTATATGGACCACTGATTTCAGCTATCACAGTGACACCA....................................................................................AACTTTAGAGTTG-ACACTGGTAGT-GGC-TTACCT-GTTGGAGCTG-TT-ATCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTATTTGCTCTGTGGAAGAAAGGCATTTTTGGAGGGAAAAATAACCAAGAAGAATTAG.........................................................................................................................................................................................................................................................................................................................................AACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAGACTTAGACAAATTAAAGCTGCTACTAATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAG..................................................................................................................................................................................GGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E214137" ref_strand="+" ref_description="SGN-E214137 [cLEC-80-J16]">
      <seq>ggcttacctgttggagctgttatcggcattgtactcgcttcaattgtagtgcttctgctagttttatttgctctgtggaagaaaggcatttttggagggaaaaataaccaagaagaattagaactcagagcccttgatttacaaacaggtcattttagacttagacaaattaaagctgctactaataactttgatcctgccaacaaaattggtgaaggagggtttggaccagtttacaagggtgtactcgccgatggtgccatcatagctgttaagcagctgtcttccaagtcaaagcaaggaaatcgtgaatttgtcaatgagataggcatgatttcagctctacaacacccaaaccttgtcaagctttacggttgttgcatagaagggaaccagttattagtgatatacgaatacatggaaaataactgtcttgctcgagctctctttggccgtgacgatcagagattaaacatagactgggcaaccagaaaaaggatatgctcaggaatagcaaaagggttagcttaccttcatgaagaatcaaggttgaaaatcgtccatagagatataaagtgtacgaatgtgcttctttgataggatctgaacgcgaagatttcagattttggattggctaaattagatga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="62909" stop="64748"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63209" g_stop="63330" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="121" r_length="121" r_score="0.877"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63331" i_stop="63659" i_length="329">
            <donor d_prob="0.996" d_score="0.85"/>
            <acceptor a_prob="0.880" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63660" g_stop="63778" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="240" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="63779" i_stop="63956" i_length="178">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="63957" g_stop="64167" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="451" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64168" i_stop="64252" i_length="85">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64253" g_stop="64448" g_length="196"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="647" r_length="196" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E214137" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>648</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E214137" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63209" e_stop="63330"/>
          <exon e_start="63660" e_stop="63778"/>
          <exon e_start="63957" e_stop="64167"/>
          <exon e_start="64253" e_stop="64448"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGCTTTACCTGGTTGAAGCTGTTTAACCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTA-TTGCTCTGTGG-AGAAAGGCA-TCTTGGAGGGAGAAATAGCCAAGAAGAATTAGGTAATACATATCTCAAAGACTTTATTCACTCTCTATATTTGATAATATGGCGATAGTTCTGTTGTGATAATCAGAATCATTTACGAGATTTCTAGCCGTGAGATACAAATAATTATCTCCCTGTAATTGACCGGCATTGAGATGATTGTTCTGTTGGTGGATCGACATCATGTCGTATCATAGATACTTAGCACACGATTAAATGCTCATGACGTCTTAAACTGTCTTCGTCATACAGATGTTCATTCTTTTAAAAGTTGTTTTTCATCATACAGATGTTTTAGAAGATCTATATATACTGACGTTTGCAATGTTCATCTCGTTTACAGAACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAGACTTAGACAAATTAAAGCTGCTACTAATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAGGTATCAATTCTCTATCCATACTGATTTTGCATAAGGACAGCTTGCGGTTTTTTGGTGATATTTCCTACTGGTTATCCTCGATGTCATGTTTATAGGAAAAATAGAGTAGTAATAATTGAAGTAACTCATATCCTTCTTCTGTCTGTAATATGATTGTTGTGAATATTGCTATCTGTAGGGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTGGTAATGCTTCGCAACAACATTTTAAGAATCGTTAATTATGCAGTGATAGTTCATGCTTCACATTCCTCCAATTCTCATTTCTCAGGCCGTGACGATCAGAGATTAAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTCCATAGAGATATAAAGTGTACGAATGTGCTTCTTGATAAGGATCTGAACGCGAAGATTTCAGATTTTGGATTGGCTAAATTAGATGA</genome_strand>
        <mrna_strand>GGCTT-ACCT-GTTGGAGCTG-TT-ATCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTATTTGCTCTGTGGAAGAAAGGCATTTTTGGAGGGAAAAATAACCAAGAAGAATTAG.........................................................................................................................................................................................................................................................................................................................................AACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAGACTTAGACAAATTAAAGCTGCTACTAATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAG..................................................................................................................................................................................GGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTG.....................................................................................GCCGTGACGATCAGAGATTAAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTCCATAGAGATATAAAGTGTACGAATGTGCTTCTTTGATAGGATCTGAACGCGAAGATTTCAGATTTTGGATTGGCTAAATTAGATGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E434323" ref_strand="+" ref_description="SGN-E434323 [STM-59-D8]">
      <seq>ataacttcgatcctgccaacaaaattggtgaaggagggtttggaccagtttacaagggagtactcgctgatggtgccatcatagctgttaagcagctgtcttccaagtcgaagcaaggaaatcgtgaatttgtcaatgagataggcatgatttcagctctacaacacccaaaccttgtcaagctttacggttgttgcatagaagggaaccagttattagtgatatacgaatacatggaaaataactgtcttgctcgagctctctttggccgtgacgaccagaggttgaacatagactgggcaaccagaaaaaggatatgctcaggaatagcaaaagggttagcttaccttcatgaagaatcaaggttgaaaatcgtacaccgagatataaagtgtaccaatgtgcttcttgataaggatctgaacgctaagatttcagattttggattggctaaattagatgaagaagagaacactcatattagcacccgaattgctggaacagtaggttatatggctccggagtatgcaatgagaggctacttgacagataaagctgatgtttatagcttttggagttgttttattagagattgtcagtgggaaaagcaacacaaactacaggccaaaagaggaatttgtttaccttcttgactgggcttatgtcctaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="63423" stop="65082"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63723" g_stop="63778" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63779" i_stop="63956" i_length="178">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63957" g_stop="64167" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="267" r_length="211" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64168" i_stop="64252" i_length="85">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64253" g_stop="64490" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="505" r_length="238" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64491" i_stop="64618" i_length="128">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64619" g_stop="64769" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="657" r_length="152" r_score="0.980"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64770" i_stop="64860" i_length="91">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.894" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64861" g_stop="64874" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="658" r_stop="671" r_length="14" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E434323" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>670</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E434323" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63723" e_stop="63778"/>
          <exon e_start="63957" e_stop="64167"/>
          <exon e_start="64253" e_stop="64490"/>
          <exon e_start="64619" e_stop="64769"/>
          <exon e_start="64861" e_stop="64874"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAGGTATCAATTCTCTATCCATACTGATTTTGCATAAGGACAGCTTGCGGTTTTTTGGTGATATTTCCTACTGGTTATCCTCGATGTCATGTTTATAGGAAAAATAGAGTAGTAATAATTGAAGTAACTCATATCCTTCTTCTGTCTGTAATATGATTGTTGTGAATATTGCTATCTGTAGGGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTGGTAATGCTTCGCAACAACATTTTAAGAATCGTTAATTATGCAGTGATAGTTCATGCTTCACATTCCTCCAATTCTCATTTCTCAGGCCGTGACGATCAGAGATTAAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTCCATAGAGATATAAAGTGTACGAATGTGCTTCTTGATAAGGATCTGAACGCGAAGATTTCAGATTTTGGATTGGCTAAATTAGATGAAGAAGAGAACACTCATATTAGCACCCGAATTGCTGGAACAGTGTAAGCCTTCTTATCATAACTGTCTCTGTACTATCATGTGATGAGAGAGTTACAGTTCTGTGCGTTTAAATTTGTTCACTACTATGGTTACTTTGAAGTATCTTACGTTTCGTTTTCTTTTCTTGAAGAGGTTATATGGCTCCGGAGTATGCAATGAGAGGCTACTTGACAGATAAAGCTGATGTTTATAGC-TTTGGAGTTGTTTTATTAGAGATTGTCAGTGGGAAAAGCAACACAAACTACAGACCAAAAGAGGAATTTGTTTACCTTCTTGACTGGGTAAACTACCTTCTCTACTTTCTTAAACTCTGTATACGTTAGAACTAGACAAACAAATTGAAACGAAGGGAGCATTTGCTTTGTTATGCAGGCTTACGTCCTACA</genome_strand>
        <mrna_strand>ATAACTTCGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAG..................................................................................................................................................................................GGAGTACTCGCTGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCGAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTG.....................................................................................GCCGTGACGACCAGAGGTTGAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTACACCGAGATATAAAGTGTACCAATGTGCTTCTTGATAAGGATCTGAACGCTAAGATTTCAGATTTTGGATTGGCTAAATTAGATGAAGAAGAGAACACTCATATTAGCACCCGAATTGCTGGAACAGT................................................................................................................................AGGTTATATGGCTCCGGAGTATGCAATGAGAGGCTACTTGACAGATAAAGCTGATGTTTATAGCTTTTGGAGTTGTTTTATTAGAGATTGTCAGTGGGAAAAGCAACACAAACTACAGGCCAAAAGAGGAATTTGTTTACCTTCTTGACTGG...........................................................................................GCTTATGTCCTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E410502" ref_strand="+" ref_description="SGN-E410502 [PPI-17-A6]">
      <seq>ataacttcgatcctgccaacaaaattggtgaaggagggtttggaccagtttacaagggagtactcgctgatggtgccatcatagctgttaagcagctgtcttccaagtcgaagcaaggaaatcgtgaatttgtcaatgagataggcatgatttcagctctacaacacccaaaccttgtcaagctttacggttgttgcatagaagggaaccagttattagtgatatacgaatacatggaaaataactgtcttgctcgagctctctttggccgtgacgaccagaggttgaacatagactgggcaaccagaaaaaggatatgctcaggaatagcaaaagggttagcttaccttcatgaagaatcaaggttgaaaatcgtacaccgagatataaagtgtaccaatgtgcttcttgataaggatctgaacgctaagatttcagattttggattggctaaattagatgaagaagagaacactcatattagcacccgaattgctggaacagtaggttatatggctccggagtatgcaatgagaggctacttgacagataaagctgatgtttatagcttttggagttgttttatttagagattgtcagtgggaaaagcaacacaaactacaggcccaaagaggaatttgtttaccttcttgactgggcttatgtccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="63423" stop="65080"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="63723" g_stop="63778" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="56" r_length="56" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="63779" i_stop="63956" i_length="178">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="63957" g_stop="64167" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="57" r_stop="267" r_length="211" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64168" i_stop="64252" i_length="85">
            <donor d_prob="0.953" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64253" g_stop="64490" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="505" r_length="238" r_score="0.966"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64491" i_stop="64618" i_length="128">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64619" g_stop="64769" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="506" r_stop="658" r_length="153" r_score="0.960"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64770" i_stop="64860" i_length="91">
            <donor d_prob="0.996" d_score="0.96"/>
            <acceptor a_prob="0.894" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64861" g_stop="64872" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="670" r_length="12" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E410502" ref_strand="+">
        <total_alignment_score>0.973</total_alignment_score>
        <cumulative_length_of_scored_exons>668</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E410502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="63723" e_stop="63778"/>
          <exon e_start="63957" e_stop="64167"/>
          <exon e_start="64253" e_stop="64490"/>
          <exon e_start="64619" e_stop="64769"/>
          <exon e_start="64861" e_stop="64872"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAGGTATCAATTCTCTATCCATACTGATTTTGCATAAGGACAGCTTGCGGTTTTTTGGTGATATTTCCTACTGGTTATCCTCGATGTCATGTTTATAGGAAAAATAGAGTAGTAATAATTGAAGTAACTCATATCCTTCTTCTGTCTGTAATATGATTGTTGTGAATATTGCTATCTGTAGGGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTGGTAATGCTTCGCAACAACATTTTAAGAATCGTTAATTATGCAGTGATAGTTCATGCTTCACATTCCTCCAATTCTCATTTCTCAGGCCGTGACGATCAGAGATTAAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTCCATAGAGATATAAAGTGTACGAATGTGCTTCTTGATAAGGATCTGAACGCGAAGATTTCAGATTTTGGATTGGCTAAATTAGATGAAGAAGAGAACACTCATATTAGCACCCGAATTGCTGGAACAGTGTAAGCCTTCTTATCATAACTGTCTCTGTACTATCATGTGATGAGAGAGTTACAGTTCTGTGCGTTTAAATTTGTTCACTACTATGGTTACTTTGAAGTATCTTACGTTTCGTTTTCTTTTCTTGAAGAGGTTATATGGCTCCGGAGTATGCAATGAGAGGCTACTTGACAGATAAAGCTGATGTTTATAGC-TTTGGAGTTGTTTTA-TTAGAGATTGTCAGTGGGAAAAGCAACACAAACTACAGACCAAAAGAGGAATTTGTTTACCTTCTTGACTGGGTAAACTACCTTCTCTACTTTCTTAAACTCTGTATACGTTAGAACTAGACAAACAAATTGAAACGAAGGGAGCATTTGCTTTGTTATGCAGGCTTACGTCCTA</genome_strand>
        <mrna_strand>ATAACTTCGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAG..................................................................................................................................................................................GGAGTACTCGCTGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCGAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTG.....................................................................................GCCGTGACGACCAGAGGTTGAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTACACCGAGATATAAAGTGTACCAATGTGCTTCTTGATAAGGATCTGAACGCTAAGATTTCAGATTTTGGATTGGCTAAATTAGATGAAGAAGAGAACACTCATATTAGCACCCGAATTGCTGGAACAGT................................................................................................................................AGGTTATATGGCTCCGGAGTATGCAATGAGAGGCTACTTGACAGATAAAGCTGATGTTTATAGCTTTTGGAGTTGTTTTATTTAGAGATTGTCAGTGGGAAAAGCAACACAAACTACAGGCCCAAAGAGGAATTTGTTTACCTTCTTGACTGG...........................................................................................GCTTATGTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E618839" ref_strand="+" ref_description="SGN-E618839 [69522]">
      <seq>ctgctatgaaaataactgtcttgctcgagctctctttggccgtgacgaccagaggttgaacatagactgggcaaccagaaaaaggatatgctcaggaatagcaaaagggttagcttaccttcatgaagaatcaaggttgaaaatcgtacaccgagatataaagtgtaccaatgtgcttcttgataaggatctgaacgctaagatttcagattttggattggctaaattagatgaagaagagaacactcatattagcacccgaattgctggaacagtaggttatatggctccggagtatgcaatgagaggctacttgacagataaagctgatgtttatagctttggagttgttttattagagattgtcagtgggaaaagcaacacaaactacaggccaaaagaggaatttgtttaccttcttgactgggcttatgtcctacaagaacagggaaatctgttagaactagtggatccatgtctcggtacccattactccaaaaaagaggcaatgcggatgataaatatttctcttttgtgcacaaatccctctcctactctccgaccatccatgtcttcagtagtgagtatgctcgaaggaaaactccccgtgcaagcaaccaataatcaagctcactacatcagacgatgaaatgagatttaaatcgtttgagaaactttcacatgaccagtcaaaacaacacaaagtatcaaacatactctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="63831" stop="65449"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64130" g_stop="64167" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="0.868"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64168" i_stop="64252" i_length="85">
            <donor d_prob="0.953" d_score="0.00"/>
            <acceptor a_prob="0.956" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64253" g_stop="64490" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="276" r_length="238" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64491" i_stop="64618" i_length="128">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64619" g_stop="64769" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="427" r_length="151" r_score="0.993"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64770" i_stop="64860" i_length="91">
            <donor d_prob="0.996" d_score="0.98"/>
            <acceptor a_prob="0.894" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64861" g_stop="65149" g_length="289"/>
          <reference_exon_boundary r_type="cDNA" r_start="428" r_stop="721" r_length="294" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E618839" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E618839" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64130" e_stop="64167"/>
          <exon e_start="64253" e_stop="64490"/>
          <exon e_start="64619" e_stop="64769"/>
          <exon e_start="64861" e_stop="65149"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTGGTAATGCTTCGCAACAACATTTTAAGAATCGTTAATTATGCAGTGATAGTTCATGCTTCACATTCCTCCAATTCTCATTTCTCAGGCCGTGACGATCAGAGATTAAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTCCATAGAGATATAAAGTGTACGAATGTGCTTCTTGATAAGGATCTGAACGCGAAGATTTCAGATTTTGGATTGGCTAAATTAGATGAAGAAGAGAACACTCATATTAGCACCCGAATTGCTGGAACAGTGTAAGCCTTCTTATCATAACTGTCTCTGTACTATCATGTGATGAGAGAGTTACAGTTCTGTGCGTTTAAATTTGTTCACTACTATGGTTACTTTGAAGTATCTTACGTTTCGTTTTCTTTTCTTGAAGAGGTTATATGGCTCCGGAGTATGCAATGAGAGGCTACTTGACAGATAAAGCTGATGTTTATAGCTTTGGAGTTGTTTTATTAGAGATTGTCAGTGGGAAAAGCAACACAAACTACAGACCAAAAGAGGAATTTGTTTACCTTCTTGACTGGGTAAACTACCTTCTCTACTTTCTTAAACTCTGTATACGTTAGAACTAGACAAACAAATTGAAACGAAGGGAGCATTTGCTTTGTTATGCAGGCTTACGTCCTACAAGAACAGGGAAATCTGTTAGAACTAGTTGATCCACGTCTCGGTACCAATTACTCCAAAAAAGAGGCAATGCGGATGATAAACGTGTCTCTTTTGTGCACGAATCCCTCTCCTACTCTCCGACCATCCATGTCTTCTGTAGTGAGTATGCTCGAAGGAAAACTCCCCGTGCAAGC-ACCAATAATCAAACGTACTACATCAGACGATGAAATGAGATTTAAATCGTTCGAGAAGCTTTCACATGA-CAGTC-AAACAACAC-AAGTATC-AACATACTCTC</genome_strand>
        <mrna_strand>CTGCTATGAAAATAACTGTCTTGCTCGAGCTCTCTTTG.....................................................................................GCCGTGACGACCAGAGGTTGAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTACACCGAGATATAAAGTGTACCAATGTGCTTCTTGATAAGGATCTGAACGCTAAGATTTCAGATTTTGGATTGGCTAAATTAGATGAAGAAGAGAACACTCATATTAGCACCCGAATTGCTGGAACAGT................................................................................................................................AGGTTATATGGCTCCGGAGTATGCAATGAGAGGCTACTTGACAGATAAAGCTGATGTTTATAGCTTTGGAGTTGTTTTATTAGAGATTGTCAGTGGGAAAAGCAACACAAACTACAGGCCAAAAGAGGAATTTGTTTACCTTCTTGACTGG...........................................................................................GCTTATGTCCTACAAGAACAGGGAAATCTGTTAGAACTAGTGGATCCATGTCTCGGTACCCATTACTCCAAAAAAGAGGCAATGCGGATGATAAATATTTCTCTTTTGTGCACAAATCCCTCTCCTACTCTCCGACCATCCATGTCTTCAGTAGTGAGTATGCTCGAAGGAAAACTCCCCGTGCAAGCAACCAATAATCAAGCTCACTACATCAGACGATGAAATGAGATTTAAATCGTTTGAGAAACTTTCACATGACCAGTCAAAACAACACAAAGTATCAAACATACTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E462046" ref_strand="+" ref_description="SGN-E462046 [cPRO-10-M14]">
      <seq>ttcgttttctcttatgacaaattttacaggcattgatggatcttttgtcacaaatgctagtagatcaatcacattgacaggatgggtaaagtcctcctatgggaacatcactactaagtcagctcaaggtttaagttatagtaattatatggtggagggaaacggaggaaatttgcaaaatgtggatcagattatttatttcaatgaaactgttgatgttgtgatgccatcttcatctgtccagtctcttgagtcctttaaaaagtttctgcttctcttgcattctgacgatgtagacaaaggagacgaaagctatgcctcaatctcaaatgttacgctgggatttaatgataagagggtaaagacgtccaagaacggatcatcagccagctctactgaaaacatgcaaaaagcacagggccatattcttgtaaagggccggatagtagtcagcggggttgggagtacccaacaggtctacaaatataagggcaattcattctgctactccaggaacataagcagctcaaattacacaatacactatgataaagttagcgatagttgccccagaagcactttgtctcgtttgcctttcagctttggcaaatttcggtctgttcctgctcgaagggtctctttggcatctcatcttggtgatgttaaagatggtgtctgacattgctccaattcattgtcttccactncttcaacataacaattcctctttgtgaactgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="69920" stop="71259"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70220" g_stop="70959" g_length="740"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="740" r_length="740" r_score="0.931"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E462046" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E462046" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70220" e_stop="70959"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTTTCTCTTAGGACAAATTTTACAGGCATTGATGGATCTTTCGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTTAAGTCATCCTACGGGAACATCACTACTAAGTCAGCTCAAGTTTTAAGTTATAGTAATTATATGGTGGAGGGTAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTATTGTCTTCCACTCCTTCAACATAACAGTTCCTCTATGTTTACTGCT</genome_strand>
        <mrna_strand>TTCGTTTTCTCTTATGACAAATTTTACAGGCATTGATGGATCTTTTGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTAAAGTCCTCCTATGGGAACATCACTACTAAGTCAGCTCAAGGTTTAAGTTATAGTAATTATATGGTGGAGGGAAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTTGTGATGCCATCTTCATCTGTCCAGTCTCTTGAGTCCTTTAAAAAGTTTCTGCTTCTCTTGCATTCTGACGATGTAGACAAAGGAGACGAAAGCTATGCCTCAATCTCAAATGTTACGCTGGGATTTAATGATAAGAGGGTAAAGACGTCCAAGAACGGATCATCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGCCATATTCTTGTAAAGGGCCGGATAGTAGTCAGCGGGGTTGGGAGTACCCAACAGGTCTACAAATATAAGGGCAATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACACTATGATAAAGTTAGCGATAGTTGCCCCAGAAGCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCGGTCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCAATTCATTGTCTTCCACTNCTTCAACATAACAATTCCTCTTTGTGAACTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E430543" ref_strand="+" ref_description="SGN-E430543 [STM-53-H22]">
      <seq>ttcgttttctcttatgacaaattttacaggcattgatggatcttttgtcacaaatgctagtagatcaatcacattgacaggatgggtaaagtcctcctatgggaacatcactactaagtcagctcaaggtttaagttatagtaattatatggtggagggaaacggaggaaatttgcaaaatgtggatcagattatttatttcaatgaaactgttgatgttgtgatgccatcttcatctgtccagtctcttgagtcctttaaaaagtttctgcttctcttgcattctgacgatgtagacaaaggagacgaaagctatgcctcaatctcaaatgttacgctgggatttaatgataagagggtaaagacgtccaagaacggatcatcagccagctctactgaaaacatgcaaaaagcacagggccatattcttgtaaagggccggatagtagtcagcggggttgggagtacccaacaggtctacaaatataagggcaattcattctgctactccaggaacataagcagctcaaattacacaatacactatgataaagttagcgatagttgccccagaagcactttgtct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="69920" stop="71105"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70220" g_stop="70805" g_length="586"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="586" r_length="586" r_score="0.928"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E430543" ref_strand="+">
        <total_alignment_score>0.928</total_alignment_score>
        <cumulative_length_of_scored_exons>586</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E430543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70220" e_stop="70805"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTTTCTCTTAGGACAAATTTTACAGGCATTGATGGATCTTTCGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTTAAGTCATCCTACGGGAACATCACTACTAAGTCAGCTCAAGTTTTAAGTTATAGTAATTATATGGTGGAGGGTAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCT</genome_strand>
        <mrna_strand>TTCGTTTTCTCTTATGACAAATTTTACAGGCATTGATGGATCTTTTGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTAAAGTCCTCCTATGGGAACATCACTACTAAGTCAGCTCAAGGTTTAAGTTATAGTAATTATATGGTGGAGGGAAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTTGTGATGCCATCTTCATCTGTCCAGTCTCTTGAGTCCTTTAAAAAGTTTCTGCTTCTCTTGCATTCTGACGATGTAGACAAAGGAGACGAAAGCTATGCCTCAATCTCAAATGTTACGCTGGGATTTAATGATAAGAGGGTAAAGACGTCCAAGAACGGATCATCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGCCATATTCTTGTAAAGGGCCGGATAGTAGTCAGCGGGGTTGGGAGTACCCAACAGGTCTACAAATATAAGGGCAATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACACTATGATAAAGTTAGCGATAGTTGCCCCAGAAGCACTTTGTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E465223" ref_strand="+" ref_description="SGN-E465223 [cPRO-20-O22]">
      <seq>ttcgttttctcttatgacaaattttacaggcattgatggatcttttgtcacaaatgctagtagatcaatcacattgacaggatgggtaaagtcctcctatgggaacatcactactaagtcagctcaaggtttaagttatagtaattatatggtggagggaaacggaggaaatttgcaaaatgtggatcagattatttatttcaatgaaactgttgatgttgtgatgccatcttcatctgtccagtctcttgagtcctttaaaaagtttctgcttctcttgcattctgacgatgtagacaaaggagacgaaagctatgcctcaatctcaaatgttacgctgggatttaatgataagagggtaaagacgtccaagaacggatcatcagccagctctactgaaaacatgcaaaaagcacagggccatattcttgtaaagggccggatagtagtcagcggggttgggagtacccaacaggtctaccaatataagggcaattcattctgctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="69920" stop="70959"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70220" g_stop="70728" g_length="509"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="509" r_length="509" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E465223" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>509</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E465223" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70220" e_stop="70728"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGTTTTCTCTTAGGACAAATTTTACAGGCATTGATGGATCTTTCGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTTAAGTCATCCTACGGGAACATCACTACTAAGTCAGCTCAAGTTTTAAGTTATAGTAATTATATGGTGGAGGGTAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACT</genome_strand>
        <mrna_strand>TTCGTTTTCTCTTATGACAAATTTTACAGGCATTGATGGATCTTTTGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTAAAGTCCTCCTATGGGAACATCACTACTAAGTCAGCTCAAGGTTTAAGTTATAGTAATTATATGGTGGAGGGAAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTTGTGATGCCATCTTCATCTGTCCAGTCTCTTGAGTCCTTTAAAAAGTTTCTGCTTCTCTTGCATTCTGACGATGTAGACAAAGGAGACGAAAGCTATGCCTCAATCTCAAATGTTACGCTGGGATTTAATGATAAGAGGGTAAAGACGTCCAAGAACGGATCATCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGCCATATTCTTGTAAAGGGCCGGATAGTAGTCAGCGGGGTTGGGAGTACCCAACAGGTCTACCAATATAAGGGCAATTCATTCTGCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E372442" ref_strand="+" ref_description="SGN-E372442 [TUS-32-K20]">
      <seq>ccagctctactgaaaacatgcaaaaagcagaaactgttgatgtcgtgaggccaacttcatatgttcagtctcgtaagtccttcaaaaagtttctgcttctcttgcattctgacaatgtagacaaaggagatgaaagctatgcctcaatctcaaatgttacgttgggatttgatgataataggataaagacttccaagaacgtatcgtcagccagctctactgaaaacatgcaaaaagcacagggacatattcttgtaaaggggcaattggttgtcagtgggatcgggagtacccaacaagtctataaatataaggatgattcattctgctactccaggaacataagcagctcaaattacacaatacattatgataaagttagcgataattgccccagaatcactttgtctcgtttgcctttcagctttggcaaatttcaatctgttcctgctcgaagggtctctttggcatctcatcttggtgatgttaaagatggtgtctgacattgctccattttattgtcttccactccttcaacataacagttcctctatgtttactgctgtcaaagaagttgtcaactgtcacggccttccaattatgattgtaaggcaatacttctgcattgcctcttttgtttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="70125" stop="71339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70425" g_stop="71039" g_length="615"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="644" r_length="615" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E372442" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>615</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E372442" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70425" e_stop="71039"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTATTGTCTTCCACTCCTTCAACATAACAGTTCCTCTATGTTTACTGCTGTCAAAGAAGTTGTCAACTGTCACGGCCTTCCAATTATGATTGTAAGGCAATACTTCTGCATTGCCTCTTTTGTTTCTTG</genome_strand>
        <mrna_strand>GAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTATTGTCTTCCACTCCTTCAACATAACAGTTCCTCTATGTTTACTGCTGTCAAAGAAGTTGTCAACTGTCACGGCCTTCCAATTATGATTGTAAGGCAATACTTCTGCATTGCCTCTTTTGTTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E294173" ref_strand="+" ref_description="SGN-E294173 [cLET-13-H4]">
      <seq>ccagctctactgaaaacatgcaaaaagcagaaactgttgatgtcgtgaggccaacttcatatgttcagtctcgtaagtccttcaaaaagtttctgcttctcttgcattctgacaatgtagacaaaggagatgaaagctatgcctcaatctcaaatgttacgttgggatttgatgataataggataaagacttccaagaacgtatcgtcagccagctctactgaaaacatgcaaaaagcacagggacatattcttgtaaaggggcaattggttgtcagtgggatcgggagtacccaacaagtctataaatataaggatgattcattctgctactccaggaacataagcagctcaaattacacaatacattatgataaagttagcgataattgccccagaatcactttgtctcgtttgcctttcagctttggcaaatttcaatctgttcctgctcgaagggtctctttggcatctcatcttggtgatgttaaagatggtgtctgacattgctccatttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="+" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="70125" stop="71213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="70425" g_stop="70913" g_length="489"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="518" r_length="489" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="+" ref_id="SGN-E294173" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294173" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="70425" e_stop="70913"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTA</genome_strand>
        <mrna_strand>GAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-7SnW1G/sgn_ests_tomato_potato" ref_id="SGN-E372441" ref_strand="+" ref_description="SGN-E372441 [TUS-32-K20]">
      <seq>tttttttttcaggtaaattgtaatatcactttaagtataattctcccagggaaaaccactggtgacaattttagtgaagtttaatcttggaatatccagcaacacaaatgcaaggtgatgctattgtttgaaacttgtctcttattgcacaaagtgaaaacccgaacaaacgcaagaaacaaaagaggcaatgcaaaagtattgccttacaatcataattggaaggccgtgacagttgacaacttctttgacagcagtaaacatagaggaactgttatgttgaaggagtggaagacaataaaatggagcaatgtcagacaccatctttaacatcaccaagatgagatgccaaagagacccttcgagcaggaacagattgaaatttgccaaagctgaaaggcaaacgagacaaagtgattctggggcaattatcgctaactttatcataatgtattgtgtaatttgagctgcttatgttcctggagtagcagaatgaatcatccttatatttatagacttgttgggtactcccgatcccactgacaaccaattgcccctttacaagaatatgtccctgtgctttttgcatgttttcagtagagctggctgacgatacgttcttggaagtctttatcctattatcatcaaatcccaacgtaacatttgagattgaggcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0020C08-UWFkv/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C12HBa0020C08.1" temp_strand="-" temp_description="C12HBa0020C08.1  AC217430.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0020C08 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="71504" stop="70234"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71211" g_stop="70534" g_length="678"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="678" r_length="678" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0020C08.1" gen_strand="-" ref_id="SGN-E372441" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0020C08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E372441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71211" e_stop="70534"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGTGATTCAGGTAAATTGTAATATCACTTTAAGTATAATTCTCCCAGGGAAAACCACTGGTGACAATTTTAGTGAAGTTTAATCTTGGAATATCCAGCAACACAAATGCAAGGTGATGCTATTGTTTGAAACTTGTCTCTTATTGCACAAAGTGAAAACCCGAACAAACGCAAGAAACAAAAGAGGCAATGCAGAAGTATTGCCTTACAATCATAATTGGAAGGCCGTGACAGTTGACAACTTCTTTGACAGCAGTAAACATAGAGGAACTGTTATGTTGAAGGAGTGGAAGACAATAAAATGGAGCAATGTCAGACACCATCTTTAACATCACCAAGATGAGATGCCAAAGAGACCCTTCGAGCAGGAACAGATTGAAATTTGCCAAAGCTGAAAGGCAAACGAGACAAAGTGATTCTGGGGCAATTATCGCTAACTTTATCATAATGTATTGTGTAATTTGAGCTGCTTATGTTCCTGGAGTAGCAGAATGAATCATCCTTATATTTATAGACTTGTTGGGTACTCCCGATCCCACTGACAACCAATTGCCCCTTTACAAGAATATGTCCCTGTGCTTTTTGCATGTTTTCAGTAGAGCTGGCTGACGATACGTTCTTGGAAGTCTTTATCCTATTATCATCAAATCCCAACGTAACATTTGAGATTGAGGCAT</genome_strand>
        <mrna_strand>TTTTTTTTTCAGGTAAATTGTAATATCACTTTAAGTATAATTCTCCCAGGGAAAACCACTGGTGACAATTTTAGTGAAGTTTAATCTTGGAATATCCAGCAACACAAATGCAAGGTGATGCTATTGTTTGAAACTTGTCTCTTATTGCACAAAGTGAAAACCCGAACAAACGCAAGAAACAAAAGAGGCAATGCAAAAGTATTGCCTTACAATCATAATTGGAAGGCCGTGACAGTTGACAACTTCTTTGACAGCAGTAAACATAGAGGAACTGTTATGTTGAAGGAGTGGAAGACAATAAAATGGAGCAATGTCAGACACCATCTTTAACATCACCAAGATGAGATGCCAAAGAGACCCTTCGAGCAGGAACAGATTGAAATTTGCCAAAGCTGAAAGGCAAACGAGACAAAGTGATTCTGGGGCAATTATCGCTAACTTTATCATAATGTATTGTGTAATTTGAGCTGCTTATGTTCCTGGAGTAGCAGAATGAATCATCCTTATATTTATAGACTTGTTGGGTACTCCCGATCCCACTGACAACCAATTGCCCCTTTACAAGAATATGTCCCTGTGCTTTTTGCATGTTTTCAGTAGAGCTGGCTGACGATACGTTCTTGGAAGTCTTTATCCTATTATCATCAAATCCCAACGTAACATTTGAGATTGAGGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>46</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="13873" PGL_stop="11302"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13873" e_stop="13700"/>
            <exon e_start="12522" e_stop="12439"/>
            <exon e_start="12076" e_stop="11994"/>
            <exon e_start="11858" e_stop="11302"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.989" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13873" e_stop="13700" e_length="174"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.956">
            <gDNA_intron_boundary i_start="13699" i_stop="12523" i_length="1177"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12522" e_stop="12439" e_length="84"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="12438" i_stop="12077" i_length="362"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12076" e_stop="11994" e_length="83"/>
          </exon>
          <intron i_serial="3" don_prob="0.998" acc_prob="0.989">
            <gDNA_intron_boundary i_start="11993" i_stop="11859" i_length="135"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="11858" e_stop="11302" e_length="557"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13873" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E296607" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13871" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389781" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13871" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11730"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227009" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13864" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E717001" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13864" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11521"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E716994" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13851" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11707"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E336549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13848" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E714665" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13847" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11708"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13846" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E746567" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13832" stop="13700"/>
              <exon start="12522" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11656"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248206" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12505" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11510"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E711673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12465" stop="12439"/>
              <exon start="12076" stop="11994"/>
              <exon start="11858" stop="11302"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E389519" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAAAGCAGTGATAAGGAGATATTTTTCAAAAAAAAAAAAGATGGCCGGATTGTCACAAGATTGGGAGCCGGTGGTGATTCGCAAGAAAGCGCCGACCGCCGCCGCACGGAAAGATGAGAAAGCAGTCAACGCCGCCCGTCGAGCCGGTGCCGAAATCGAAACCGTCAGAAAAG : CTACTGCTGGGTCAAACAAGGCTGCCTCTAGTAGCACAACGTTGAACACGAGAAAGCTGGATGAAGATACTGAGAATCTGTCAC : ATCAAAAGGTACCTACTGAACTGAAGAAAGCGATTATGCAAGCTCGACAGGATAAGAAGCTTACTCAGTCTCAACTTGCCCAA : TTGATAAACGAAAAACCACAGATCATTCAAGAGTATGAATCTGGAAAGGCAATTCCAAACCAACAGATAATTTCTAAACTGGAGAGAGCTCTTGGTGCGAAACTTCGTGGAAAGAAATAAACTGCAAAAGTGATGGTGGTGGTGGTGGGGTGTGTGTGTGTGTGTGAACCTTTTGAACGTCTACATCGTTTGGGTTCTAAGTGTGGTCATGTACATGAGCCTTTTGAATGTTTTCTTTAGCCAGTAAGGTGGTTCTTGTGTCTGGATTCGGGACGTTACTTTCGTTGTTAAAACTGAATGTTTTTCCTGTCGAAAATGGATGTGCTTGCTCTTGCTAGATGTTTAAGGATTGCAATTAGGACAATTCAGCAAATTTGATTATCCAGACATCTTAATCTTAATGAACATGATTGTTCACAAGATATAAAGTTTATTTTGCCATACCAACGTCCTTTGCATTTAGGAATTGTTAAGTTACTAATTCAGATTAAAAGATGAGAATTGGTTAATGACCTTAAAATAGATCAGTTACATTATGTAATTGTATTTCTTTTTGT</gDNA_template>
            <first_frame> V  K  Q  *  *  G  D  I  F  Q  K  K  K  R  W  P  D  C  H  K  I  G  S  R  W  *  F  A  R  K  R  R  P  P  P  H  G  K  M  R  K  Q  S  T  P  P  V  E  P  V  P  K  S  K  P  S  E  K  :  L  L  L  G  Q  T  R  L  P  L  V  A  Q  R  *  T  R  E  S  W  M  K  I  L  R  I  C  H  :  I  K  R  Y  L  L  N  *  R  K  R  L  C  K  L  D  R  I  R  S  L  L  S  L  N  L  P  N :   *  *  T  K  N  H  R  S  F  K  S  M  N  L  E  R  Q  F  Q  T  N  R  *  F  L  N  W  R  E  L  L  V  R  N  F  V  E  R  N  K  L  Q  K  *  W  W  W  W  W  G  V  C  V  C  V  N  L  L  N  V  Y  I  V  W  V  L  S  V  V  M  Y  M  S  L  L  N  V  F  F  S  Q  *  G  G  S  C  V  W  I  R  D  V  T  F  V  V  K  T  E  C  F  S  C  R  K  W  M  C  L  L  L  L  D  V  *  G  L  Q  L  G  Q  F  S  K  F  D  Y  P  D  I  L  I  L  M  N  M  I  V  H  K  I  *  S  L  F  C  H  T  N  V  L  C  I  *  E  L  L  S  Y  *  F  R  L  K  D  E  N  W  L  M  T  L  K  *  I  S  Y  I  M  *  L  Y  F  F  L  </first_frame>
            <second_frame>  *  S  S  D  K  E  I  F  F  K  K  K  K  D  G  R  I  V  T  R  L  G  A  G  G  D  S  Q  E  S  A  D  R  R  R  T  E  R  *  E  S  S  Q  R  R  P  S  S  R  C  R  N  R  N  R  Q  K  S :   Y  C  W  V  K  Q  G  C  L  *  *  H  N  V  E  H  E  K  A  G  *  R  Y  *  E  S  V  T :   S  K  G  T  Y  *  T  E  E  S  D  Y  A  S  S  T  G  *  E  A  Y  S  V  S  T  C  P   : I  D  K  R  K  T  T  D  H  S  R  V  *  I  W  K  G  N  S  K  P  T  D  N  F  *  T  G  E  S  S  W  C  E  T  S  W  K  E  I  N  C  K  S  D  G  G  G  G  G  V  C  V  C  V  *  T  F  *  T  S  T  S  F  G  F  *  V  W  S  C  T  *  A  F  *  M  F  S  L  A  S  K  V  V  L  V  S  G  F  G  T  L  L  S  L  L  K  L  N  V  F  P  V  E  N  G  C  A  C  S  C  *  M  F  K  D  C  N  *  D  N  S  A  N  L  I  I  Q  T  S  *  S  *  *  T  *  L  F  T  R  Y  K  V  Y  F  A  I  P  T  S  F  A  F  R  N  C  *  V  T  N  S  D  *  K  M  R  I  G  *  *  P  *  N  R  S  V  T  L  C  N  C  I  S  F  C </second_frame>
            <third_frame>   K  A  V  I  R  R  Y  F  S  K  K  K  K  M  A  G  L  S  Q  D  W  E  P  V  V  I  R  K  K  A  P  T  A  A  A  R  K  D  E  K  A  V  N  A  A  R  R  A  G  A  E  I  E  T  V  R  K   : A  T  A  G  S  N  K  A  A  S  S  S  T  T  L  N  T  R  K  L  D  E  D  T  E  N  L  S   : H  Q  K  V  P  T  E  L  K  K  A  I  M  Q  A  R  Q  D  K  K  L  T  Q  S  Q  L  A  Q  :  L  I  N  E  K  P  Q  I  I  Q  E  Y  E  S  G  K  A  I  P  N  Q  Q  I  I  S  K  L  E  R  A  L  G  A  K  L  R  G  K  K  *  T  A  K  V  M  V  V  V  V  G  C  V  C  V  C  E  P  F  E  R  L  H  R  L  G  S  K  C  G  H  V  H  E  P  F  E  C  F  L  *  P  V  R  W  F  L  C  L  D  S  G  R  Y  F  R  C  *  N  *  M  F  F  L  S  K  M  D  V  L  A  L  A  R  C  L  R  I  A  I  R  T  I  Q  Q  I  *  L  S  R  H  L  N  L  N  E  H  D  C  S  Q  D  I  K  F  I  L  P  Y  Q  R  P  L  H  L  G  I  V  K  L  L  I  Q  I  K  R  *  E  L  V  N  D  L  K  I  D  Q  L  H  Y  V  I  V  F  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13871" stop="13700"/>
                    <exon start="12522" stop="12439"/>
                    <exon start="12076" stop="11994"/>
                    <exon start="11858" stop="11739"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>456</number_coding_nucleotides>
                  <number_encoded_amino_acids>152</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KAVIRRYFSKKKKMAGLSQDWEPVVIRKKAPTAAARKDEKAVNAARRAGAEIETVRKATAGSNKAASSSTTLNTRKLDEDTENLSHQKVPTELKKAIMQARQDKKLTQSQLAQLINEKPQIIQEYESGKAIPNQQIISKLERALGAKLRGKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="17827" PGL_stop="14375"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17827" e_stop="17693"/>
            <exon e_start="16642" e_stop="16241"/>
            <exon e_start="14931" e_stop="14375"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.991" e_score="0.998"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17827" e_stop="17693" e_length="135"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="17692" i_stop="16643" i_length="1050"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="16642" e_stop="16241" e_length="402"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.991">
            <gDNA_intron_boundary i_start="16240" i_stop="14932" i_length="1309"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="14931" e_stop="14375" e_length="557"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17827" stop="17693"/>
              <exon start="16642" stop="16462"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541547" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17826" stop="17693"/>
              <exon start="16642" stop="16241"/>
              <exon start="14931" stop="14881"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E298313" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16486" stop="16241"/>
              <exon start="14931" stop="14375"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E541545" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14885" stop="14397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419159" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGCAAAGGAAGAGGGAGAAGAAGAAGAGAAAAGCTGCCAACAAGAGAGATCCGAGAAGACTTGGTGTTCAGGGGAAGAAGAAGAAGCAGAAATTTGACACTGCTGAAGAAAGAATCAAACAGAAGATTGAAAAT : GCAAAAGTCAAAGAAGCTATGCTAATTGAGAGACTAAAGAGATATGAGGTTACCAAAGTTCAAGGTCCCGAGGTTAAGCCACATTTTCTCACTGGTGAAGAACGATTCTATATTAAAAAGATGGCACAAAAAAAGTCTAATTATGTGCCTATTGGCAAAAGGGGAGTCTTTGGAGGTGTTATTCTTAATATGCATCTACATTGGAAAAGACATGAAACTGTCAAAGTCATATGCAAACCCTGCAAACCTGGTCAGATTCAAGAATATGTTGATGAAATTGCAAGACTGAGTGGTGGCATTCCGATTCAGATAATTGCAAATGATACCATCGTTTTTTACCGAGGAAGGGAATATGTGCAGCCTGAAATTATGTATCCTATTGATACACTGTCGAAGAAGAGG : GCGTTGGAAAAATCAAAATACGAGCAATCGCTAGAGTCTGTGAGACATTTCATTGCCATTGCTGAGAAGGAACTTGCACTCTACTATAGACATGTTGCCCTATATGATGAACCAAATATTCAGAGTGCTTACTCCATCCTTGATGATTCAACAAGTACAAGTGAAAAACGAAATGATGAAATAGGAGAGGAGAACTATTCAGCAGACGAATCTATTTCCTTGGATCTCGAGTTACCACAAGTTGATGATTATTGCTCGGATGATAAACAATCTTTAAGCGAATTTGGATTTGAGGATACTGATGAATCAAGTAGTGATGAGTTGGATTCTGGGGAGGAGGAAACTAGTAATTACTGCGGTAGCATATGGGGAAATTATTGAATGTTGAGACTTGAAATAATGTGGTTTTAATTCTTGATCTGATAAATTGAGGGATTGGAATAGAATAGAATTTTTTCAAATTCTAAATCTTCTGTTTGGTTATCCTGAAATTGGCACAAAAACTAGAACTTGATTTTTAATTTTTTAACCCAAGATAGATCATATTTCTTATGTCA</gDNA_template>
            <first_frame> L  Q  R  K  R  E  K  K  K  R  K  A  A  N  K  R  D  P  R  R  L  G  V  Q  G  K  K  K  K  Q  K  F  D  T  A  E  E  R  I  K  Q  K  I  E  N  :  A  K  V  K  E  A  M  L  I  E  R  L  K  R  Y  E  V  T  K  V  Q  G  P  E  V  K  P  H  F  L  T  G  E  E  R  F  Y  I  K  K  M  A  Q  K  K  S  N  Y  V  P  I  G  K  R  G  V  F  G  G  V  I  L  N  M  H  L  H  W  K  R  H  E  T  V  K  V  I  C  K  P  C  K  P  G  Q  I  Q  E  Y  V  D  E  I  A  R  L  S  G  G  I  P  I  Q  I  I  A  N  D  T  I  V  F  Y  R  G  R  E  Y  V  Q  P  E  I  M  Y  P  I  D  T  L  S  K  K  R  :  A  L  E  K  S  K  Y  E  Q  S  L  E  S  V  R  H  F  I  A  I  A  E  K  E  L  A  L  Y  Y  R  H  V  A  L  Y  D  E  P  N  I  Q  S  A  Y  S  I  L  D  D  S  T  S  T  S  E  K  R  N  D  E  I  G  E  E  N  Y  S  A  D  E  S  I  S  L  D  L  E  L  P  Q  V  D  D  Y  C  S  D  D  K  Q  S  L  S  E  F  G  F  E  D  T  D  E  S  S  S  D  E  L  D  S  G  E  E  E  T  S  N  Y  C  G  S  I  W  G  N  Y  *  M  L  R  L  E  I  M  W  F  *  F  L  I  *  *  I  E  G  L  E  *  N  R  I  F  S  N  S  K  S  S  V  W  L  S  *  N  W  H  K  N  *  N  L  I  F  N  F  L  T  Q  D  R  S  Y  F  L  C   </first_frame>
            <second_frame>  C  K  G  R  G  R  R  R  R  E  K  L  P  T  R  E  I  R  E  D  L  V  F  R  G  R  R  R  S  R  N  L  T  L  L  K  K  E  S  N  R  R  L  K  M :   Q  K  S  K  K  L  C  *  L  R  D  *  R  D  M  R  L  P  K  F  K  V  P  R  L  S  H  I  F  S  L  V  K  N  D  S  I  L  K  R  W  H  K  K  S  L  I  M  C  L  L  A  K  G  E  S  L  E  V  L  F  L  I  C  I  Y  I  G  K  D  M  K  L  S  K  S  Y  A  N  P  A  N  L  V  R  F  K  N  M  L  M  K  L  Q  D  *  V  V  A  F  R  F  R  *  L  Q  M  I  P  S  F  F  T  E  E  G  N  M  C  S  L  K  L  C  I  L  L  I  H  C  R  R  R  G :   R  W  K  N  Q  N  T  S  N  R  *  S  L  *  D  I  S  L  P  L  L  R  R  N  L  H  S  T  I  D  M  L  P  Y  M  M  N  Q  I  F  R  V  L  T  P  S  L  M  I  Q  Q  V  Q  V  K  N  E  M  M  K  *  E  R  R  T  I  Q  Q  T  N  L  F  P  W  I  S  S  Y  H  K  L  M  I  I  A  R  M  I  N  N  L  *  A  N  L  D  L  R  I  L  M  N  Q  V  V  M  S  W  I  L  G  R  R  K  L  V  I  T  A  V  A  Y  G  E  I  I  E  C  *  D  L  K  *  C  G  F  N  S  *  S  D  K  L  R  D  W  N  R  I  E  F  F  Q  I  L  N  L  L  F  G  Y  P  E  I  G  T  K  T  R  T  *  F  L  I  F  *  P  K  I  D  H  I  S  Y  V  </second_frame>
            <third_frame>   A  K  E  E  G  E  E  E  E  K  S  C  Q  Q  E  R  S  E  K  T  W  C  S  G  E  E  E  E  A  E  I  *  H  C  *  R  K  N  Q  T  E  D  *  K   : C  K  S  Q  R  S  Y  A  N  *  E  T  K  E  I  *  G  Y  Q  S  S  R  S  R  G  *  A  T  F  S  H  W  *  R  T  I  L  Y  *  K  D  G  T  K  K  V  *  L  C  A  Y  W  Q  K  G  S  L  W  R  C  Y  S  *  Y  A  S  T  L  E  K  T  *  N  C  Q  S  H  M  Q  T  L  Q  T  W  S  D  S  R  I  C  *  *  N  C  K  T  E  W  W  H  S  D  S  D  N  C  K  *  Y  H  R  F  L  P  R  K  G  I  C  A  A  *  N  Y  V  S  Y  *  Y  T  V  E  E  E   : G  V  G  K  I  K  I  R  A  I  A  R  V  C  E  T  F  H  C  H  C  *  E  G  T  C  T  L  L  *  T  C  C  P  I  *  *  T  K  Y  S  E  C  L  L  H  P  *  *  F  N  K  Y  K  *  K  T  K  *  *  N  R  R  G  E  L  F  S  R  R  I  Y  F  L  G  S  R  V  T  T  S  *  *  L  L  L  G  *  *  T  I  F  K  R  I  W  I  *  G  Y  *  *  I  K  *  *  *  V  G  F  W  G  G  G  N  *  *  L  L  R  *  H  M  G  K  L  L  N  V  E  T  *  N  N  V  V  L  I  L  D  L  I  N  *  G  I  G  I  E  *  N  F  F  K  F  *  I  F  C  L  V  I  L  K  L  A  Q  K  L  E  L  D  F  *  F  F  N  P  R  *  I  I  F  L  M  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17827" stop="17693"/>
                    <exon start="16642" stop="16241"/>
                    <exon start="14931" stop="14551"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>915</number_coding_nucleotides>
                  <number_encoded_amino_acids>305</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQRKREKKKRKAANKRDPRRLGVQGKKKKQKFDTAEERIKQKIENAKVKEAMLIERLKRYEVTKVQGPEVKPHFLTGEERFYIKKMAQKKSNYVPIGKRGVFGGVILNMHLHWKRHETVKVICKPCKPGQIQEYVDEIARLSGGIPIQIIANDTIVFYRGREYVQPEIMYPIDTLSKKRALEKSKYEQSLESVRHFIAIAEKELALYYRHVALYDEPNIQSAYSILDDSTSTSEKRNDEIGEENYSADESISLDLELPQVDDYCSDDKQSLSEFGFEDTDESSSDELDSGEEETSNYCGSIWGNY*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="19770" PGL_stop="18527"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19770" e_stop="18527"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="19770" e_stop="18527" e_length="1244"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19770" stop="19060"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19194" stop="18557"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205887" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19154" stop="18527"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209835" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19154" stop="18579"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E209830" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19104" stop="18552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E299938" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATAATGCAACAAGATGAAGATTTTGAGCCAAAATCTGTTCACGAATGTAGACAGAGAAATGATTGGCCAAAATGGAAGGATGCAATTCAAGCTGAATTGGCTTCACTAGAAAAACGTGAAGTTTTTGGACCAATAATCCGAACACCTGAAGGTATCAAGCCAGTGGGGTACAAATGGGTTTTTGTACGAAAAAGAAATGAGAAAGGTGAAGTCATGAGATATAAGGCCCGACTCGTTGCTCAAGGTTTTTCTCAAAGACTTGGCATTGATTATATGGAGACATATTCTCCAGTGGTAGATGCAATCACCTTTAGATATCTCATAAATCTGGCAGTTCATGAAAAACTTGAAATGCGTCTAATGGACGTTGTCACAGCCTATCTATATGGCTCATTGGACCACAACATTTTCATGAAAATTCCTGAAGCATTTAAAGTGCCTGAAACATACAAAGATTCAAGAGAAACTTGTTCAATAAAGCTTCAGAAATCTCTGTATGGACTGAAACAATCAGGAAGGATGTGGTACAATCGTTTGAGTGAATATTTGTTAAAGAAAGGGTACAAAAATGACCCGATTTGTCCCTGCATTTTCATTAAACGGTTGGGGTCTGAATTTGTAATAATAGCTGTGTATGTTGATGATTTGAACATCATTGGAACTCGTAAAGTGCTTTTAGAAGCTGTTGAGTGTCTGAAAAGAGAATTTGAAATGAAAGATCTCGGCAAGACAAAATTTTGTCTTGGTCTACAGATTGAGAATTTGTCAAATGGAATACTTGTTCATCAATCAACGTACACAGAAAAGATACTAAAGCGTTTTTACATGGATAACTCACATCCATTGAGTACTCCAATGATGGTAAGATCTCTTGACATCAATACAGATCCATTTCGACCTCAAGAGAATGATGAAGAGCTTCTTGGTGATGAAACTCCTTATCTTAGTGCGATCGGGGCACTAATGTACCTTGCTAACAATACTCGACCAGATATCTGTTTTGCAGTAAGTCTACTGGCAAGATTCAGTTCCTCCCCAACAAAAAGACATTGGAATGGTGTTAAACACATACTTCGATATCTTAGAGGGACCATGGACATGGGTTTATTCTATTCCAATGAATCCAAATCAGAACTGATTGGTTACGCAGATGCAGGGTATTTATCAGATCCGCATAAAACTCGATCACAAACATGCTATTTGTTTACATGTGGAGACACGGCAATATCTTGGCGATCAATG</gDNA_template>
            <first_frame> K  *  C  N  K  M  K  I  L  S  Q  N  L  F  T  N  V  D  R  E  M  I  G  Q  N  G  R  M  Q  F  K  L  N  W  L  H  *  K  N  V  K  F  L  D  Q  *  S  E  H  L  K  V  S  S  Q  W  G  T  N  G  F  L  Y  E  K  E  M  R  K  V  K  S  *  D  I  R  P  D  S  L  L  K  V  F  L  K  D  L  A  L  I  I  W  R  H  I  L  Q  W  *  M  Q  S  P  L  D  I  S  *  I  W  Q  F  M  K  N  L  K  C  V  *  W  T  L  S  Q  P  I  Y  M  A  H  W  T  T  T  F  S  *  K  F  L  K  H  L  K  C  L  K  H  T  K  I  Q  E  K  L  V  Q  *  S  F  R  N  L  C  M  D  *  N  N  Q  E  G  C  G  T  I  V  *  V  N  I  C  *  R  K  G  T  K  M  T  R  F  V  P  A  F  S  L  N  G  W  G  L  N  L  *  *  *  L  C  M  L  M  I  *  T  S  L  E  L  V  K  C  F  *  K  L  L  S  V  *  K  E  N  L  K  *  K  I  S  A  R  Q  N  F  V  L  V  Y  R  L  R  I  C  Q  M  E  Y  L  F  I  N  Q  R  T  Q  K  R  Y  *  S  V  F  T  W  I  T  H  I  H  *  V  L  Q  *  W  *  D  L  L  T  S  I  Q  I  H  F  D  L  K  R  M  M  K  S  F  L  V  M  K  L  L  I  L  V  R  S  G  H  *  C  T  L  L  T  I  L  D  Q  I  S  V  L  Q  *  V  Y  W  Q  D  S  V  P  P  Q  Q  K  D  I  G  M  V  L  N  T  Y  F  D  I  L  E  G  P  W  T  W  V  Y  S  I  P  M  N  P  N  Q  N  *  L  V  T  Q  M  Q  G  I  Y  Q  I  R  I  K  L  D  H  K  H  A  I  C  L  H  V  E  T  R  Q  Y  L  G  D  Q   </first_frame>
            <second_frame>  N  N  A  T  R  *  R  F  *  A  K  I  C  S  R  M  *  T  E  K  *  L  A  K  M  E  G  C  N  S  S  *  I  G  F  T  R  K  T  *  S  F  W  T  N  N  P  N  T  *  R  Y  Q  A  S  G  V  Q  M  G  F  C  T  K  K  K  *  E  R  *  S  H  E  I  *  G  P  T  R  C  S  R  F  F  S  K  T  W  H  *  L  Y  G  D  I  F  S  S  G  R  C  N  H  L  *  I  S  H  K  S  G  S  S  *  K  T  *  N  A  S  N  G  R  C  H  S  L  S  I  W  L  I  G  P  Q  H  F  H  E  N  S  *  S  I  *  S  A  *  N  I  Q  R  F  K  R  N  L  F  N  K  A  S  E  I  S  V  W  T  E  T  I  R  K  D  V  V  Q  S  F  E  *  I  F  V  K  E  R  V  Q  K  *  P  D  L  S  L  H  F  H  *  T  V  G  V  *  I  C  N  N  S  C  V  C  *  *  F  E  H  H  W  N  S  *  S  A  F  R  S  C  *  V  S  E  K  R  I  *  N  E  R  S  R  Q  D  K  I  L  S  W  S  T  D  *  E  F  V  K  W  N  T  C  S  S  I  N  V  H  R  K  D  T  K  A  F  L  H  G  *  L  T  S  I  E  Y  S  N  D  G  K  I  S  *  H  Q  Y  R  S  I  S  T  S  R  E  *  *  R  A  S  W  *  *  N  S  L  S  *  C  D  R  G  T  N  V  P  C  *  Q  Y  S  T  R  Y  L  F  C  S  K  S  T  G  K  I  Q  F  L  P  N  K  K  T  L  E  W  C  *  T  H  T  S  I  S  *  R  D  H  G  H  G  F  I  L  F  Q  *  I  Q  I  R  T  D  W  L  R  R  C  R  V  F  I  R  S  A  *  N  S  I  T  N  M  L  F  V  Y  M  W  R  H  G  N  I  L  A  I  N  </second_frame>
            <third_frame>   I  M  Q  Q  D  E  D  F  E  P  K  S  V  H  E  C  R  Q  R  N  D  W  P  K  W  K  D  A  I  Q  A  E  L  A  S  L  E  K  R  E  V  F  G  P  I  I  R  T  P  E  G  I  K  P  V  G  Y  K  W  V  F  V  R  K  R  N  E  K  G  E  V  M  R  Y  K  A  R  L  V  A  Q  G  F  S  Q  R  L  G  I  D  Y  M  E  T  Y  S  P  V  V  D  A  I  T  F  R  Y  L  I  N  L  A  V  H  E  K  L  E  M  R  L  M  D  V  V  T  A  Y  L  Y  G  S  L  D  H  N  I  F  M  K  I  P  E  A  F  K  V  P  E  T  Y  K  D  S  R  E  T  C  S  I  K  L  Q  K  S  L  Y  G  L  K  Q  S  G  R  M  W  Y  N  R  L  S  E  Y  L  L  K  K  G  Y  K  N  D  P  I  C  P  C  I  F  I  K  R  L  G  S  E  F  V  I  I  A  V  Y  V  D  D  L  N  I  I  G  T  R  K  V  L  L  E  A  V  E  C  L  K  R  E  F  E  M  K  D  L  G  K  T  K  F  C  L  G  L  Q  I  E  N  L  S  N  G  I  L  V  H  Q  S  T  Y  T  E  K  I  L  K  R  F  Y  M  D  N  S  H  P  L  S  T  P  M  M  V  R  S  L  D  I  N  T  D  P  F  R  P  Q  E  N  D  E  E  L  L  G  D  E  T  P  Y  L  S  A  I  G  A  L  M  Y  L  A  N  N  T  R  P  D  I  C  F  A  V  S  L  L  A  R  F  S  S  S  P  T  K  R  H  W  N  G  V  K  H  I  L  R  Y  L  R  G  T  M  D  M  G  L  F  Y  S  N  E  S  K  S  E  L  I  G  Y  A  D  A  G  Y  L  S  D  P  H  K  T  R  S  Q  T  C  Y  L  F  T  C  G  D  T  A  I  S  W  R  S  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19768" stop="18527"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1242</number_coding_nucleotides>
                  <number_encoded_amino_acids>414</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IMQQDEDFEPKSVHECRQRNDWPKWKDAIQAELASLEKREVFGPIIRTPEGIKPVGYKWVFVRKRNEKGEVMRYKARLVAQGFSQRLGIDYMETYSPVVDAITFRYLINLAVHEKLEMRLMDVVTAYLYGSLDHNIFMKIPEAFKVPETYKDSRETCSIKLQKSLYGLKQSGRMWYNRLSEYLLKKGYKNDPICPCIFIKRLGSEFVIIAVYVDDLNIIGTRKVLLEAVECLKREFEMKDLGKTKFCLGLQIENLSNGILVHQSTYTEKILKRFYMDNSHPLSTPMMVRSLDINTDPFRPQENDEELLGDETPYLSAIGALMYLANNTRPDICFAVSLLARFSSSPTKRHWNGVKHILRYLRGTMDMGLFYSNESKSELIGYADAGYLSDPHKTRSQTCYLFTCGDTAISWRSM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="21625" PGL_stop="21080"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="21625" e_stop="21080"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.903"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.903">
            <gDNA_exon_boundary e_start="21625" e_stop="21080" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21625" stop="21080"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E206250" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="21515" stop="21147"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E332350" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAATCCCCAGTTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATGCTTTCTTGATAGTGCTACAACGCATACAATATTAAAAGAAAAGAAATATTTTTCTAATTTGGTTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGTATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</gDNA_template>
            <first_frame> K  S  P  V  V  S  W  I  Q  D  E  *  W  R  C  M  L  S  *  *  C  Y  N  A  Y  N  I  K  R  K  E  I  F  F  *  F  G  Y  E  N  G  I  C  Q  H  N  I  R  *  Y  K  I  N  *  G  L  W  K  S  D  L  I  T  T  W  R  D  N  I  K  H  *  *  C  I  I  L  *  *  V  S  K  K  L  I  K  F  Q  S  Y  S  P  K  W  L  S  C  *  D  G  *  *  R  K  G  *  I  P  L  H  Y  Y  N  *  C  *  E  E  N  C  A  *  K  I  T  C  I  F  F  W  V  V  L  Y  K  Y  K  Y  S  *  I  T  C  R  S  K  Q  K  V  Y  *  F  *  *  F  Y  H  L  A  *  P  V  G  P  S  W  I  *  Y  D  A  Q  N  H  *  E  F  T  W  T  H  L </first_frame>
            <second_frame>  N  P  Q  L  S  V  G  F  K  M  S  N  G  D  V  C  F  L  D  S  A  T  T  H  T  I  L  K  E  K  K  Y  F  S  N  L  V  M  K  M  A  Y  V  N  T  I  S  G  S  T  K  L  I  E  G  S  G  R  A  T  L  L  L  P  G  G  T  I  L  S  I  D  N  A  L  Y  C  S  K  S  Q  R  N  L  L  S  F  K  V  I  R  Q  N  G  Y  H  V  E  T  A  N  E  G  K  V  E  Y  L  Y  I  T  T  I  N  V  E  K  K  I  V  H  E  K  L  P  V  F  S  S  G  L  Y  Y  T  S  I  S  T  V  E  S  H  A  V  V  N  K  R  F  T  N  F  N  D  F  I  I  W  H  D  R  L  G  H  P  G  F  N  M  M  R  K  I  I  E  N  S  H  G  H  T   </second_frame>
            <third_frame>   I  P  S  C  Q  L  D  S  R  *  V  M  E  M  Y  A  F  L  I  V  L  Q  R  I  Q  Y  *  K  K  R  N  I  F  L  I  W  L  *  K  W  H  M  S  T  Q  Y  Q  V  V  Q  N  *  L  R  A  L  E  E  R  P  Y  Y  Y  L  E  G  Q  Y  *  A  L  I  M  H  Y  I  V  V  S  L  K  E  T  Y  *  V  S  K  L  F  A  K  M  A  I  M  L  R  R  L  M  K  E  R  L  N  T  F  T  L  L  Q  L  M  L  R  R  K  L  C  M  K  N  Y  L  Y  F  L  L  G  C  T  I  Q  V  *  V  Q  L  N  H  M  P  *  *  T  K  G  L  L  I  L  M  I  L  S  F  G  M  T  G  W  A  I  L  D  L  I  *  C  A  K  S  L  R  I  H  M  D  T  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="21624" stop="21082"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPQLSVGFKMSNGDVCFLDSATTHTILKEKKYFSNLVMKMAYVNTISGSTKLIEGSGRATLLLPGGTILSIDNALYCSKSQRNLLSFKVIRQNGYHVETANEGKVEYLYITTINVEKKIVHEKLPVFSSGLYYTSISTVESHAVVNKRFTNFNDFIIWHDRLGHPGFNMMRKIIENSHGHT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="22921" PGL_stop="22159"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="22921" e_stop="22159"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.969"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="22921" e_stop="22159" e_length="763"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="22921" stop="22159"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689229" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTGATTCACATATTATCTCATAATTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGCCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAAATTGAATATTTGACGGTAAAAGATCCACTTGAGTTGTGGACTGACTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCCCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTAAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTACAGCAACAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATTTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGTGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAGATGATCATCGGGGCTATAATAATGCACGGGGACGTGGCAA</gDNA_template>
            <first_frame> N  T  L  S  A  R  S  C  Y  L  Q  R  Y  Y  I  N  I  F  I  *  F  T  Y  Y  L  I  I  S  L  C  R  I  Y  P  N  L  S  L  C  H  *  I  F  L  E  R  I  I  F  H  G  Y  S  M  L  R  F  T  W  L  L  K  V  L  M  P  L  L  L  R  E  M  K  H  R  V  K  I  R  R  K  L  *  F  S  F  V  I  I  L  M  R  A  *  K  L  N  I  *  R  *  K  I  H  L  S  C  G  L  T  *  R  G  D  M  T  T  *  R  Q  Q  C  C  Q  E  P  V  M  S  G  C  I  Y  G  F  K  I  L  R  P  *  L  N  T  T  L  L  Y  S  G  *  P  P  S  *  N  Y  V  G  R  L  *  K  M  R  T  C  W  K  R  H  L  L  L  S  M  P  Q  M  *  Y  Y  S  N  N  I  V  K  R  V  F  R  N  I  L  N  *  F  H  V  F  W  W  L  S  N  I  M  L  F  *  *  K  I  M  K  L  V  P  L  E  L  L  H  Y  R  R  Q  M  W  W  K  H  V  I  N  L  K  *  K  E  M  I  I  G  A  I  I  M  H  G  D  V  A  </first_frame>
            <second_frame>  T  R  Y  Q  H  E  V  A  T  C  K  G  I  I  *  I  F  L  F  D  S  H  I  I  S  *  F  H  Y  V  E  F  I  Q  T  *  V  C  A  I  R  Y  F  W  K  E  L  S  F  M  G  T  R  C  *  D  S  L  G  C  *  R  S  *  C  H  Y  Y  S  G  K  *  S  I  E  S  R  *  G  E  S  Y  D  F  P  S  S  S  S  *  *  G  P  E  N  *  I  F  D  G  K  R  S  T  *  V  V  D  *  L  K  G  E  I  *  P  P  K  G  N  S  V  A  K  S  P  L  *  V  D  A  F  T  V  S  R  F  *  D  R  N  *  I  Q  L  C  C  I  Q  D  N  L  P  V  K  I  M  W  G  D  Y  K  R  *  G  H  V  G  K  D  T  Y  Y  F  P  C  L  K  C  D  I  T  A  T  I  S  *  K  G  F  S  E  I  F  *  T  N  F  M  S  F  G  G  *  A  T  *  C  S  F  N  E  K  S  *  S  S  S  H  W  S  C  S  I  T  G  G  K  C  G  G  S  T  *  S  I  *  S  K  K  R  *  S  S  G  L  *  *  C  T  G  T  W  Q </second_frame>
            <third_frame>   H  V  I  S  T  K  L  L  L  A  K  V  L  Y  K  Y  F  Y  L  I  H  I  L  S  H  N  F  I  M  S  N  L  S  K  L  E  F  V  P  L  D  I  S  G  K  N  Y  L  S  W  V  L  D  A  E  I  H  L  A  A  K  G  L  D  A  T  I  T  Q  G  N  E  A  S  S  Q  D  K  A  K  A  M  I  F  L  R  H  H  L  D  E  G  L  K  I  E  Y  L  T  V  K  D  P  L  E  L  W  T  D  L  K  G  R  Y  D  H  L  K  A  T  V  L  P  R  A  R  Y  E  W  M  H  L  R  F  Q  D  F  K  T  V  I  E  Y  N  S  A  V  F  R  I  T  S  Q  L  K  L  C  G  E  T  I  K  D  E  D  M  L  E  K  T  L  T  T  F  H  A  S  N  V  I  L  Q  Q  Q  Y  R  E  K  G  F  Q  K  Y  S  E  L  I  S  C  L  L  V  A  E  Q  H  N  A  L  L  M  K  N  H  E  A  R  P  T  G  A  A  P  L  P  E  A  N  V  V  E  A  R  D  Q  S  E  V  K  R  D  D  H  R  G  Y  N  N  A  R  G  R  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="22919" stop="22161"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVISTKLLLAKVLYKYFYLIHILSHNFIMSNLSKLEFVPLDISGKNYLSWVLDAEIHLAAKGLDATITQGNEASSQDKAKAMIFLRHHLDEGLKIEYLTVKDPLELWTDLKGRYDHLKATVLPRARYEWMHLRFQDFKTVIEYNSAVFRITSQLKLCGETIKDEDMLEKTLTTFHASNVILQQQYREKGFQKYSELISCLLVAEQHNALLMKNHEARPTGAAPLPEANVVEARDQSEVKRDDHRGYNNARGRG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="36140" PGL_stop="35479"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36140" e_stop="35479"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="36140" e_stop="35479" e_length="662"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36140" stop="35479"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E341676" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTCATTTGAACAATTTAGGAATGCGAAAATGGAGAAAGTGAAAAAGGTATCATCTTTCAGTCTCTCTTCTCTACTTCGCCAGCAAAAAGATGCTAAAATCGCCCTTCAACTCTTCCTTAATCCTAATCCCAGCCATGGAAGCGACAAAACTACTAAACCTTTTCGTTATTCTCCACTCTGTTATGATCTCATCATCTGCAAGCTCGGCAGAGGTAAACTCTTTCAAGAAATGGAAAAAATCATCGATAAATTGAGACAGGACACTCGAGTTTCTCTCAACGAAGTTGTTTTCTGCAATGTTATTTCTTTTTATGGAAGAGCACATTTACCTGATAAGGCTCTTCATATGTTTAATGAAATACCCTCTTTTCGCTGCTATAGAAGTATAAAATCTGTTAATAGCTTGTTGAATGCACTTTTAGCTTGTAAAGAATACAGCAAGATTGGTGAAATGTTAAACAACTTTGAAAATTACGCAACCCCAGATGTTTGTACGTTTAATATATTGATGAATGCGTGTTGTTTGTGTGGTGATTTGGGTGGTGCACGGGAGGTGTTTGATGAAATGTGTGAGAGAGGAATTCAGCCAAATGTGGTGACTTTTGGGACGTTGATTAATGGGCTTTGTGTGAATCGAGAAATTAACGAGGCGTTTAGGATGA</gDNA_template>
            <first_frame> F  I  *  T  I  *  E  C  E  N  G  E  S  E  K  G  I  I  F  Q  S  L  F  S  T  S  P  A  K  R  C  *  N  R  P  S  T  L  P  *  S  *  S  Q  P  W  K  R  Q  N  Y  *  T  F  S  L  F  S  T  L  L  *  S  H  H  L  Q  A  R  Q  R  *  T  L  S  R  N  G  K  N  H  R  *  I  E  T  G  H  S  S  F  S  Q  R  S  C  F  L  Q  C  Y  F  F  L  W  K  S  T  F  T  *  *  G  S  S  Y  V  *  *  N  T  L  F  S  L  L  *  K  Y  K  I  C  *  *  L  V  E  C  T  F  S  L  *  R  I  Q  Q  D  W  *  N  V  K  Q  L  *  K  L  R  N  P  R  C  L  Y  V  *  Y  I  D  E  C  V  L  F  V  W  *  F  G  W  C  T  G  G  V  *  *  N  V  *  E  R  N  S  A  K  C  G  D  F  W  D  V  D  *  W  A  L  C  E  S  R  N  *  R  G  V  *  D   </first_frame>
            <second_frame>  S  F  E  Q  F  R  N  A  K  M  E  K  V  K  K  V  S  S  F  S  L  S  S  L  L  R  Q  Q  K  D  A  K  I  A  L  Q  L  F  L  N  P  N  P  S  H  G  S  D  K  T  T  K  P  F  R  Y  S  P  L  C  Y  D  L  I  I  C  K  L  G  R  G  K  L  F  Q  E  M  E  K  I  I  D  K  L  R  Q  D  T  R  V  S  L  N  E  V  V  F  C  N  V  I  S  F  Y  G  R  A  H  L  P  D  K  A  L  H  M  F  N  E  I  P  S  F  R  C  Y  R  S  I  K  S  V  N  S  L  L  N  A  L  L  A  C  K  E  Y  S  K  I  G  E  M  L  N  N  F  E  N  Y  A  T  P  D  V  C  T  F  N  I  L  M  N  A  C  C  L  C  G  D  L  G  G  A  R  E  V  F  D  E  M  C  E  R  G  I  Q  P  N  V  V  T  F  G  T  L  I  N  G  L  C  V  N  R  E  I  N  E  A  F  R  M  </second_frame>
            <third_frame>   H  L  N  N  L  G  M  R  K  W  R  K  *  K  R  Y  H  L  S  V  S  L  L  Y  F  A  S  K  K  M  L  K  S  P  F  N  S  S  L  I  L  I  P  A  M  E  A  T  K  L  L  N  L  F  V  I  L  H  S  V  M  I  S  S  S  A  S  S  A  E  V  N  S  F  K  K  W  K  K  S  S  I  N  *  D  R  T  L  E  F  L  S  T  K  L  F  S  A  M  L  F  L  F  M  E  E  H  I  Y  L  I  R  L  F  I  C  L  M  K  Y  P  L  F  A  A  I  E  V  *  N  L  L  I  A  C  *  M  H  F  *  L  V  K  N  T  A  R  L  V  K  C  *  T  T  L  K  I  T  Q  P  Q  M  F  V  R  L  I  Y  *  *  M  R  V  V  C  V  V  I  W  V  V  H  G  R  C  L  M  K  C  V  R  E  E  F  S  Q  M  W  *  L  L  G  R  *  L  M  G  F  V  *  I  E  K  L  T  R  R  L  G  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36139" stop="35480"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFEQFRNAKMEKVKKVSSFSLSSLLRQQKDAKIALQLFLNPNPSHGSDKTTKPFRYSPLCYDLIICKLGRGKLFQEMEKIIDKLRQDTRVSLNEVVFCNVISFYGRAHLPDKALHMFNEIPSFRCYRSIKSVNSLLNALLACKEYSKIGEMLNNFENYATPDVCTFNILMNACCLCGDLGGAREVFDEMCERGIQPNVVTFGTLINGLCVNREINEAFRM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="37023" PGL_stop="50676"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41250" e_stop="41423"/>
            <exon e_start="41962" e_stop="42094"/>
            <exon e_start="43682" e_stop="43980"/>
            <exon e_start="45013" e_stop="45253"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.984" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.960" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.975"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41250" e_stop="41423" e_length="174"/>
          </exon>
          <intron i_serial="1" don_prob="0.984" acc_prob="1.000">
            <gDNA_intron_boundary i_start="41424" i_stop="41961" i_length="538"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41962" e_stop="42094" e_length="133"/>
          </exon>
          <intron i_serial="2" don_prob="0.984" acc_prob="0.960">
            <gDNA_intron_boundary i_start="42095" i_stop="43681" i_length="1587"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="43682" e_stop="43980" e_length="299"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43981" i_stop="45012" i_length="1032"/>
          </intron>
          <exon e_serial="4" e_score="0.975">
            <gDNA_exon_boundary e_start="45013" e_stop="45253" e_length="241"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41250" stop="41423"/>
              <exon start="41962" stop="42094"/>
              <exon start="43682" stop="43980"/>
              <exon start="45013" stop="45029"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537997" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41251" stop="41423"/>
              <exon start="41962" stop="42094"/>
              <exon start="43682" stop="43873"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267847" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41261" stop="41423"/>
              <exon start="41962" stop="42094"/>
              <exon start="43682" stop="43869"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574565" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41332" stop="41423"/>
              <exon start="41962" stop="42094"/>
              <exon start="43682" stop="43980"/>
              <exon start="45013" stop="45125"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339470" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41996" stop="42094"/>
              <exon start="43682" stop="43980"/>
              <exon start="45013" stop="45253"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537994" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAAAAACTTAGAAATATGGCTAGTGAGAAGGAAAAAATTAAAATTACAAGTGATAAGTATAGGCTATTCTTGCATGAAGATCAAGCTGCTGCTGAAGGAACCATCCAATGGAGACATGGTGATGCTCCAAGTTATGGAAGTGTTAATAAACTCTTTGAAGAAGGAAGGACTAAG : GTTTGGCCAGAAGGATCTCTTGAAGAAACAGTACAAAATGCTATAAAATCATGGGAAATGGAACTTTCACATAAGACTAGAGTAAAAGACTTTAGGACAATTAATCCTCAAAAATTCAAGCTCTTCGTAAATG : GAAGAGACGGATTGTCCGCGGAAGAGACGTTGAAAGTGGGAAGCTACAATGCGCTATTGAAGAGTTCAATGCCAAATGAATTCAAATATTACAAAGCAGATGAAGAGACATTTGAATCATCCCACAATGCTTTTAGATCAGCTTTTCCAAGAGGATTTGCTTGGGAAGTGATCAGTGTATACACAGGGCCACCAATTATTACATACAAATTCAGACATTGGGGTTTCTTTGAAGGTCCATTTAAAGGACATGCCCCTACTGGCAACATGGTCCAATTCTATGGCCTTGGTATATTGAAG : GTTGATGAATCACTAAGAGCAGAGGATGTAGAGGTATATTATGATCCAACGGAACTTTTTGGTGAACTACTCAAAGGACCAAAAATTTCTGAATCTAATGTTGAGCACCACTAGTCATGGTTTATTGATTTTATGAAGTTTTTTTTTTTATGTTTTTTCATAAAATAAACTTTCTCTGTTTGGATCGCACAATATTACAATACAATGTTACAAAGTTTGTTTGGATTGATTTATTTGAAGT</gDNA_template>
            <first_frame> *  K  L  R  N  M  A  S  E  K  E  K  I  K  I  T  S  D  K  Y  R  L  F  L  H  E  D  Q  A  A  A  E  G  T  I  Q  W  R  H  G  D  A  P  S  Y  G  S  V  N  K  L  F  E  E  G  R  T  K  :  V  W  P  E  G  S  L  E  E  T  V  Q  N  A  I  K  S  W  E  M  E  L  S  H  K  T  R  V  K  D  F  R  T  I  N  P  Q  K  F  K  L  F  V  N   : G  R  D  G  L  S  A  E  E  T  L  K  V  G  S  Y  N  A  L  L  K  S  S  M  P  N  E  F  K  Y  Y  K  A  D  E  E  T  F  E  S  S  H  N  A  F  R  S  A  F  P  R  G  F  A  W  E  V  I  S  V  Y  T  G  P  P  I  I  T  Y  K  F  R  H  W  G  F  F  E  G  P  F  K  G  H  A  P  T  G  N  M  V  Q  F  Y  G  L  G  I  L  K  :  V  D  E  S  L  R  A  E  D  V  E  V  Y  Y  D  P  T  E  L  F  G  E  L  L  K  G  P  K  I  S  E  S  N  V  E  H  H  *  S  W  F  I  D  F  M  K  F  F  F  L  C  F  F  I  K  *  T  F  S  V  W  I  A  Q  Y  Y  N  T  M  L  Q  S  L  F  G  L  I  Y  L  K  </first_frame>
            <second_frame>  K  N  L  E  I  W  L  V  R  R  K  K  L  K  L  Q  V  I  S  I  G  Y  S  C  M  K  I  K  L  L  L  K  E  P  S  N  G  D  M  V  M  L  Q  V  M  E  V  L  I  N  S  L  K  K  E  G  L  R :   F  G  Q  K  D  L  L  K  K  Q  Y  K  M  L  *  N  H  G  K  W  N  F  H  I  R  L  E  *  K  T  L  G  Q  L  I  L  K  N  S  S  S  S  *  M  :  E  E  T  D  C  P  R  K  R  R  *  K  W  E  A  T  M  R  Y  *  R  V  Q  C  Q  M  N  S  N  I  T  K  Q  M  K  R  H  L  N  H  P  T  M  L  L  D  Q  L  F  Q  E  D  L  L  G  K  *  S  V  Y  T  Q  G  H  Q  L  L  H  T  N  S  D  I  G  V  S  L  K  V  H  L  K  D  M  P  L  L  A  T  W  S  N  S  M  A  L  V  Y  *  R :   L  M  N  H  *  E  Q  R  M  *  R  Y  I  M  I  Q  R  N  F  L  V  N  Y  S  K  D  Q  K  F  L  N  L  M  L  S  T  T  S  H  G  L  L  I  L  *  S  F  F  F  Y  V  F  S  *  N  K  L  S  L  F  G  S  H  N  I  T  I  Q  C  Y  K  V  C  L  D  *  F  I  *  S </second_frame>
            <third_frame>   K  T  *  K  Y  G  *  *  E  G  K  N  *  N  Y  K  *  *  V  *  A  I  L  A  *  R  S  S  C  C  *  R  N  H  P  M  E  T  W  *  C  S  K  L  W  K  C  *  *  T  L  *  R  R  K  D  *   : G  L  A  R  R  I  S  *  R  N  S  T  K  C  Y  K  I  M  G  N  G  T  F  T  *  D  *  S  K  R  L  *  D  N  *  S  S  K  I  Q  A  L  R  K  W :   K  R  R  I  V  R  G  R  D  V  E  S  G  K  L  Q  C  A  I  E  E  F  N  A  K  *  I  Q  I  L  Q  S  R  *  R  D  I  *  I  I  P  Q  C  F  *  I  S  F  S  K  R  I  C  L  G  S  D  Q  C  I  H  R  A  T  N  Y  Y  I  Q  I  Q  T  L  G  F  L  *  R  S  I  *  R  T  C  P  Y  W  Q  H  G  P  I  L  W  P  W  Y  I  E   : G  *  *  I  T  K  S  R  G  C  R  G  I  L  *  S  N  G  T  F  W  *  T  T  Q  R  T  K  N  F  *  I  *  C  *  A  P  L  V  M  V  Y  *  F  Y  E  V  F  F  F  M  F  F  H  K  I  N  F  L  C  L  D  R  T  I  L  Q  Y  N  V  T  K  F  V  W  I  D  L  F  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41253" stop="41423"/>
                    <exon start="41962" stop="42094"/>
                    <exon start="43682" stop="43980"/>
                    <exon start="45013" stop="45126"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>714</number_coding_nucleotides>
                  <number_encoded_amino_acids>238</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLRNMASEKEKIKITSDKYRLFLHEDQAAAEGTIQWRHGDAPSYGSVNKLFEEGRTKVWPEGSLEETVQNAIKSWEMELSHKTRVKDFRTINPQKFKLFVNGRDGLSAEETLKVGSYNALLKSSMPNEFKYYKADEETFESSHNAFRSAFPRGFAWEVISVYTGPPIITYKFRHWGFFEGPFKGHAPTGNMVQFYGLGILKVDESLRAEDVEVYYDPTELFGELLKGPKISESNVEHH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="37023" e_stop="37366"/>
            <exon e_start="47365" e_stop="47499"/>
            <exon e_start="47605" e_stop="47678"/>
            <exon e_start="48669" e_stop="48708"/>
            <exon e_start="48984" e_stop="49029"/>
            <exon e_start="49920" e_stop="49999"/>
            <exon e_start="50263" e_stop="50444"/>
            <exon e_start="50608" e_stop="50676"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="0.958"/>
          <exon-intron don_prob="0.976" acc_prob="0.908" e_score="1.000"/>
          <exon-intron don_prob="0.104" acc_prob="0.941" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.917" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="0.957"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.958">
            <gDNA_exon_boundary e_start="37023" e_stop="37366" e_length="344"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="37367" i_stop="47364" i_length="9998"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="47365" e_stop="47499" e_length="135"/>
          </exon>
          <intron i_serial="2" don_prob="0.976" acc_prob="0.908">
            <gDNA_intron_boundary i_start="47500" i_stop="47604" i_length="105"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="47605" e_stop="47678" e_length="74"/>
          </exon>
          <intron i_serial="3" don_prob="0.104" acc_prob="0.941">
            <gDNA_intron_boundary i_start="47679" i_stop="48668" i_length="990"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="48669" e_stop="48708" e_length="40"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="0.999">
            <gDNA_intron_boundary i_start="48709" i_stop="48983" i_length="275"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="48984" e_stop="49029" e_length="46"/>
          </exon>
          <intron i_serial="5" don_prob="0.996" acc_prob="0.000">
            <gDNA_intron_boundary i_start="49030" i_stop="49919" i_length="890"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="49920" e_stop="49999" e_length="80"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.975">
            <gDNA_intron_boundary i_start="50000" i_stop="50262" i_length="263"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="50263" e_stop="50444" e_length="182"/>
          </exon>
          <intron i_serial="7" don_prob="0.917" acc_prob="0.987">
            <gDNA_intron_boundary i_start="50445" i_stop="50607" i_length="163"/>
          </intron>
          <exon e_serial="8" e_score="0.957">
            <gDNA_exon_boundary e_start="50608" e_stop="50676" e_length="69"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37023" stop="37366"/>
              <exon start="47365" stop="47499"/>
              <exon start="47605" stop="47678"/>
              <exon start="48669" stop="48708"/>
              <exon start="48984" stop="49029"/>
              <exon start="49920" stop="49977"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451735" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37031" stop="37366"/>
              <exon start="47365" stop="47499"/>
              <exon start="47605" stop="47626"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424118" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37258" stop="37366"/>
              <exon start="47365" stop="47499"/>
              <exon start="47605" stop="47678"/>
              <exon start="48669" stop="48708"/>
              <exon start="48984" stop="49029"/>
              <exon start="49920" stop="49999"/>
              <exon start="50263" stop="50444"/>
              <exon start="50608" stop="50676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212356" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAGCCTCCCGCTCTTCTCTTCTCCCCCAAATTCTTCCCCAAAACTCTCAATTTTGAATTCAAAGTTGAACAATCGAAGAGAAATTTGTATACAAACAATGAGGGAAGAAGAAATTGAGAGGCTAAGAGGTGTTGTGAGGGATTGTGTGAGTAAACATTTGTATTCATCAGCTATCTTCTTTGCTGATAAAGTAGCTGCAATTACTTCTGACCCAGCCGATATATACATGCAAGCACAAGCTTTGTATCTTGGTCGACACTATCGCCGTGCTTTTCACCTTCTTAATGCTTCTCAAATCGTCCTTCGTGACCTCCGCTTCCGATACCTCGCCGCCAAGTGCCTT : GAAGAACTGAAGGAGTGGGATCAATGCCTTCTAATGCTGGGTGATGCTAAAGTGGATGAACATGGTAATATTACTGATACAAGAGAGTTCAACAGCATGTACTTGGACAAGGATGGTGAAGATCGTGAAATAAAT : ATTTTATCAGCAATCTGCTTTTTGAGGGGCAAGGCATATGAAGCGTTGGAGAATCGTGCACAGGCTCGACTATG : GTATAAAGCTGCTATCAAGGCTGATCCTTTGTGTTATGAG : GCATTGGAATGTCTGATAGAGAATCACATGCTCACTTGTGATGAAG : AGAGAACCCTGCTCTCATGTTTGCAGTTTGGTCCTGAAGATGGGTGGCTTTCTTCATTCTATTCTTGTTTGATAAAGAAG : TATGATAAAGAAAATGTGGTGGAAGCTAAATTTAGAGAGCTGGAACAGAGTGGACCTAATACAAAGCTTTCGGACAAATCTGTTTTGTGTACGCTTAAATCCAACTCTGATCTTTTAGCCTGCAAAGCTGAGTATTATCATCAATGCGGTGAATATCAGAAATGCTTTGAACTAACATCTGA : ATTGCTTGAAAAGGATCCGTTCCACCTCAAGTGTACCCTGGTGCACTTAGCAGCAGCAATGGAGTTGGG</gDNA_template>
            <first_frame> I  A  S  R  S  S  L  L  P  Q  I  L  P  Q  N  S  Q  F  *  I  Q  S  *  T  I  E  E  K  F  V  Y  K  Q  *  G  K  K  K  L  R  G  *  E  V  L  *  G  I  V  *  V  N  I  C  I  H  Q  L  S  S  L  L  I  K  *  L  Q  L  L  L  T  Q  P  I  Y  T  C  K  H  K  L  C  I  L  V  D  T  I  A  V  L  F  T  F  L  M  L  L  K  S  S  F  V  T  S  A  S  D  T  S  P  P  S  A  L :   K  N  *  R  S  G  I  N  A  F  *  C  W  V  M  L  K  W  M  N  M  V  I  L  L  I  Q  E  S  S  T  A  C  T  W  T  R  M  V  K  I  V  K  *  I :   F  Y  Q  Q  S  A  F  *  G  A  R  H  M  K  R  W  R  I  V  H  R  L  D  Y   : G  I  K  L  L  S  R  L  I  L  C  V  M  R :   H  W  N  V  *  *  R  I  T  C  S  L  V  M  K  :  R  E  P  C  S  H  V  C  S  L  V  L  K  M  G  G  F  L  H  S  I  L  V  *  *  R  S :   M  I  K  K  M  W  W  K  L  N  L  E  S  W  N  R  V  D  L  I  Q  S  F  R  T  N  L  F  C  V  R  L  N  P  T  L  I  F  *  P  A  K  L  S  I  I  I  N  A  V  N  I  R  N  A  L  N  *  H  L   : N  C  L  K  R  I  R  S  T  S  S  V  P  W  C  T  *  Q  Q  Q  W  S  W  </first_frame>
            <second_frame>  *  P  P  A  L  L  F  S  P  K  F  F  P  K  T  L  N  F  E  F  K  V  E  Q  S  K  R  N  L  Y  T  N  N  E  G  R  R  N  *  E  A  K  R  C  C  E  G  L  C  E  *  T  F  V  F  I  S  Y  L  L  C  *  *  S  S  C  N  Y  F  *  P  S  R  Y  I  H  A  S  T  S  F  V  S  W  S  T  L  S  P  C  F  S  P  S  *  C  F  S  N  R  P  S  *  P  P  L  P  I  P  R  R  Q  V  P   : *  R  T  E  G  V  G  S  M  P  S  N  A  G  *  C  *  S  G  *  T  W  *  Y  Y  *  Y  K  R  V  Q  Q  H  V  L  G  Q  G  W  *  R  S  *  N  K   : Y  F  I  S  N  L  L  F  E  G  Q  G  I  *  S  V  G  E  S  C  T  G  S  T  M  :  V  *  S  C  Y  Q  G  *  S  F  V  L  *   : G  I  G  M  S  D  R  E  S  H  A  H  L  *  *  R :   E  N  P  A  L  M  F  A  V  W  S  *  R  W  V  A  F  F  I  L  F  L  F  D  K  E   : V  *  *  R  K  C  G  G  S  *  I  *  R  A  G  T  E  W  T  *  Y  K  A  F  G  Q  I  C  F  V  Y  A  *  I  Q  L  *  S  F  S  L  Q  S  *  V  L  S  S  M  R  *  I  S  E  M  L  *  T  N  I  *  :  I  A  *  K  G  S  V  P  P  Q  V  Y  P  G  A  L  S  S  S  N  G  V  G </second_frame>
            <third_frame>   S  L  P  L  F  S  S  P  P  N  S  S  P  K  L  S  I  L  N  S  K  L  N  N  R  R  E  I  C  I  Q  T  M  R  E  E  E  I  E  R  L  R  G  V  V  R  D  C  V  S  K  H  L  Y  S  S  A  I  F  F  A  D  K  V  A  A  I  T  S  D  P  A  D  I  Y  M  Q  A  Q  A  L  Y  L  G  R  H  Y  R  R  A  F  H  L  L  N  A  S  Q  I  V  L  R  D  L  R  F  R  Y  L  A  A  K  C  L  :  E  E  L  K  E  W  D  Q  C  L  L  M  L  G  D  A  K  V  D  E  H  G  N  I  T  D  T  R  E  F  N  S  M  Y  L  D  K  D  G  E  D  R  E  I  N  :  I  L  S  A  I  C  F  L  R  G  K  A  Y  E  A  L  E  N  R  A  Q  A  R  L  W :   Y  K  A  A  I  K  A  D  P  L  C  Y  E  :  A  L  E  C  L  I  E  N  H  M  L  T  C  D  E   : E  R  T  L  L  S  C  L  Q  F  G  P  E  D  G  W  L  S  S  F  Y  S  C  L  I  K  K  :  Y  D  K  E  N  V  V  E  A  K  F  R  E  L  E  Q  S  G  P  N  T  K  L  S  D  K  S  V  L  C  T  L  K  S  N  S  D  L  L  A  C  K  A  E  Y  Y  H  Q  C  G  E  Y  Q  K  C  F  E  L  T  S  E :   L  L  E  K  D  P  F  H  L  K  C  T  L  V  H  L  A  A  A  M  E  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37025" stop="37366"/>
                    <exon start="47365" stop="47499"/>
                    <exon start="47605" stop="47678"/>
                    <exon start="48669" stop="48708"/>
                    <exon start="48984" stop="49029"/>
                    <exon start="49920" stop="49999"/>
                    <exon start="50263" stop="50444"/>
                    <exon start="50608" stop="50674"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>966</number_coding_nucleotides>
                  <number_encoded_amino_acids>322</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLPLFSSPPNSSPKLSILNSKLNNRREICIQTMREEEIERLRGVVRDCVSKHLYSSAIFFADKVAAITSDPADIYMQAQALYLGRHYRRAFHLLNASQIVLRDLRFRYLAAKCLEELKEWDQCLLMLGDAKVDEHGNITDTREFNSMYLDKDGEDREINILSAICFLRGKAYEALENRAQARLWYKAAIKADPLCYEALECLIENHMLTCDEERTLLSCLQFGPEDGWLSSFYSCLIKKYDKENVVEAKFRELEQSGPNTKLSDKSVLCTLKSNSDLLACKAEYYHQCGEYQKCFELTSELLEKDPFHLKCTLVHLAAAMEL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="62478" PGL_stop="65149"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62478" e_stop="62763"/>
            <exon e_start="62904" e_stop="63098"/>
            <exon e_start="63183" e_stop="63330"/>
            <exon e_start="63660" e_stop="63778"/>
            <exon e_start="63957" e_stop="64167"/>
            <exon e_start="64253" e_stop="64490"/>
            <exon e_start="64619" e_stop="64769"/>
            <exon e_start="64861" e_stop="65149"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.572" acc_prob="0.000" e_score="0.995"/>
          <exon-intron don_prob="0.996" acc_prob="0.880" e_score="0.877"/>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.953" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.992" e_score="0.966"/>
          <exon-intron don_prob="0.996" acc_prob="0.894" e_score="0.993"/>
          <exon-only e_score="0.917"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="62478" e_stop="62763" e_length="286"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="0.998">
            <gDNA_intron_boundary i_start="62764" i_stop="62903" i_length="140"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="62904" e_stop="63098" e_length="195"/>
          </exon>
          <intron i_serial="2" don_prob="0.572" acc_prob="0.000">
            <gDNA_intron_boundary i_start="63099" i_stop="63182" i_length="84"/>
          </intron>
          <exon e_serial="3" e_score="0.877">
            <gDNA_exon_boundary e_start="63183" e_stop="63330" e_length="148"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.880">
            <gDNA_intron_boundary i_start="63331" i_stop="63659" i_length="329"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="63660" e_stop="63778" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="63779" i_stop="63956" i_length="178"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="63957" e_stop="64167" e_length="211"/>
          </exon>
          <intron i_serial="5" don_prob="0.953" acc_prob="0.956">
            <gDNA_intron_boundary i_start="64168" i_stop="64252" i_length="85"/>
          </intron>
          <exon e_serial="6" e_score="0.966">
            <gDNA_exon_boundary e_start="64253" e_stop="64490" e_length="238"/>
          </exon>
          <intron i_serial="6" don_prob="0.999" acc_prob="0.992">
            <gDNA_intron_boundary i_start="64491" i_stop="64618" i_length="128"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="64619" e_stop="64769" e_length="151"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.894">
            <gDNA_intron_boundary i_start="64770" i_stop="64860" i_length="91"/>
          </intron>
          <exon e_serial="8" e_score="0.917">
            <gDNA_exon_boundary e_start="64861" e_stop="65149" e_length="289"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62478" stop="62763"/>
              <exon start="62904" stop="63098"/>
              <exon start="63183" stop="63330"/>
              <exon start="63660" stop="63696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339727" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62943" stop="63098"/>
              <exon start="63183" stop="63330"/>
              <exon start="63660" stop="63778"/>
              <exon start="63957" stop="64167"/>
              <exon start="64253" stop="64333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348646" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62958" stop="63098"/>
              <exon start="63183" stop="63330"/>
              <exon start="63660" stop="63778"/>
              <exon start="63957" stop="64165"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E248305" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63209" stop="63330"/>
              <exon start="63660" stop="63778"/>
              <exon start="63957" stop="64167"/>
              <exon start="64253" stop="64448"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E214137" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63723" stop="63778"/>
              <exon start="63957" stop="64167"/>
              <exon start="64253" stop="64490"/>
              <exon start="64619" stop="64769"/>
              <exon start="64861" stop="64874"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434323" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="63723" stop="63778"/>
              <exon start="63957" stop="64167"/>
              <exon start="64253" stop="64490"/>
              <exon start="64619" stop="64769"/>
              <exon start="64861" stop="64872"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E410502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64130" stop="64167"/>
              <exon start="64253" stop="64490"/>
              <exon start="64619" stop="64769"/>
              <exon start="64861" stop="65149"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E618839" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCCGTCATATTTTTCTTCGCCCTCTGACAGATGGGCTTTCAGCAGTTCAGGAGTGTACGTGGGTCTTCAAGCTGCCAGTTATATTGCATCAAATACATTTTCACTGGATGTGTCCGGTCCTGACTTCTACAATACAGCACGCCTTGCCCCTAATTCCCTCAAATATTATGGGCTTTGCCTACAAGGAGGTAGCTACAGAGTGCGCCTTCACTTTGCTGAAATAATGTTTTCTAATGACTCAACATATAGCAGCCTTGGAAGGCGGATATTTGATGTAGCAATACAA : GGGAGAGTAGTTTTGAGGGATTTCAACATTATGGAGGAAGCTAACGGTGTTGGGAAAGTCATTACCAAGGACTTTCCTGATGTTACTGTTAGTAGCACTCTGGAGATTCATTTGTATTGGACCGGGAAGGGGACTAACGCTATTCCAGACAGAGGTGTATATGGACCACTGATTTCAGCTATCACAGTGACCCCA : AACTTTAAAGTTGAACACGGGAAGTGGGCTTTACCTGGTTGAAGCTGTTTAACCGGCATTGTACTCGCTTCAATTGTAGTGCTTCTGCTAGTTTTATTGCTCTGTGGAGAAAGGCATCTTGGAGGGAGAAATAGCCAAGAAGAATTAG : AACTCAGAGCCCTTGATTTACAAACAGGTCATTTTAGACTTAGACAAATTAAAGCTGCTACTAATAACTTTGATCCTGCCAACAAAATTGGTGAAGGAGGGTTTGGACCAGTTTACAAG : GGTGTACTCGCCGATGGTGCCATCATAGCTGTTAAGCAGCTGTCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTCAATGAGATAGGCATGATTTCAGCTCTACAACACCCAAACCTTGTCAAGCTTTACGGTTGTTGCATAGAAGGGAACCAGTTATTAGTGATATACGAATACATGGAAAATAACTGTCTTGCTCGAGCTCTCTTTG : GCCGTGACGATCAGAGATTAAACATAGACTGGGCAACCAGAAAAAGGATATGCTCAGGAATAGCAAAAGGGTTAGCTTACCTTCATGAAGAATCAAGGTTGAAAATCGTCCATAGAGATATAAAGTGTACGAATGTGCTTCTTGATAAGGATCTGAACGCGAAGATTTCAGATTTTGGATTGGCTAAATTAGATGAAGAAGAGAACACTCATATTAGCACCCGAATTGCTGGAACAGT : AGGTTATATGGCTCCGGAGTATGCAATGAGAGGCTACTTGACAGATAAAGCTGATGTTTATAGCTTTGGAGTTGTTTTATTAGAGATTGTCAGTGGGAAAAGCAACACAAACTACAGACCAAAAGAGGAATTTGTTTACCTTCTTGACTGG : GCTTACGTCCTACAAGAACAGGGAAATCTGTTAGAACTAGTTGATCCACGTCTCGGTACCAATTACTCCAAAAAAGAGGCAATGCGGATGATAAACGTGTCTCTTTTGTGCACGAATCCCTCTCCTACTCTCCGACCATCCATGTCTTCTGTAGTGAGTATGCTCGAAGGAAAACTCCCCGTGCAAGCACCAATAATCAAACGTACTACATCAGACGATGAAATGAGATTTAAATCGTTCGAGAAGCTTTCACATGACAGTCAAACAACACAAGTATCAACATACTCTC</gDNA_template>
            <first_frame> S  V  I  F  F  F  A  L  *  Q  M  G  F  Q  Q  F  R  S  V  R  G  S  S  S  C  Q  L  Y  C  I  K  Y  I  F  T  G  C  V  R  S  *  L  L  Q  Y  S  T  P  C  P  *  F  P  Q  I  L  W  A  L  P  T  R  R  *  L  Q  S  A  P  S  L  C  *  N  N  V  F  *  *  L  N  I  *  Q  P  W  K  A  D  I  *  C  S  N  T   : R  E  S  S  F  E  G  F  Q  H  Y  G  G  S  *  R  C  W  E  S  H  Y  Q  G  L  S  *  C  Y  C  *  *  H  S  G  D  S  F  V  L  D  R  E  G  D  *  R  Y  S  R  Q  R  C  I  W  T  T  D  F  S  Y  H  S  D  P   : K  L  *  S  *  T  R  E  V  G  F  T  W  L  K  L  F  N  R  H  C  T  R  F  N  C  S  A  S  A  S  F  I  A  L  W  R  K  A  S  W  R  E  K  *  P  R  R  I  R :   T  Q  S  P  *  F  T  N  R  S  F  *  T  *  T  N  *  S  C  Y  *  *  L  *  S  C  Q  Q  N  W  *  R  R  V  W  T  S  L  Q   : G  C  T  R  R  W  C  H  H  S  C  *  A  A  V  F  Q  V  K  A  R  K  S  *  I  C  Q  *  D  R  H  D  F  S  S  T  T  P  K  P  C  Q  A  L  R  L  L  H  R  R  E  P  V  I  S  D  I  R  I  H  G  K  *  L  S  C  S  S  S  L  W :   P  *  R  S  E  I  K  H  R  L  G  N  Q  K  K  D  M  L  R  N  S  K  R  V  S  L  P  S  *  R  I  K  V  E  N  R  P  *  R  Y  K  V  Y  E  C  A  S  *  *  G  S  E  R  E  D  F  R  F  W  I  G  *  I  R  *  R  R  E  H  S  Y  *  H  P  N  C  W  N  S  :  R  L  Y  G  S  G  V  C  N  E  R  L  L  D  R  *  S  *  C  L  *  L  W  S  C  F  I  R  D  C  Q  W  E  K  Q  H  K  L  Q  T  K  R  G  I  C  L  P  S  *  L   : G  L  R  P  T  R  T  G  K  S  V  R  T  S  *  S  T  S  R  Y  Q  L  L  Q  K  R  G  N  A  D  D  K  R  V  S  F  V  H  E  S  L  S  Y  S  P  T  I  H  V  F  C  S  E  Y  A  R  R  K  T  P  R  A  S  T  N  N  Q  T  Y  Y  I  R  R  *  N  E  I  *  I  V  R  E  A  F  T  *  Q  S  N  N  T  S  I  N  I  L   </first_frame>
            <second_frame>  P  S  Y  F  S  S  P  S  D  R  W  A  F  S  S  S  G  V  Y  V  G  L  Q  A  A  S  Y  I  A  S  N  T  F  S  L  D  V  S  G  P  D  F  Y  N  T  A  R  L  A  P  N  S  L  K  Y  Y  G  L  C  L  Q  G  G  S  Y  R  V  R  L  H  F  A  E  I  M  F  S  N  D  S  T  Y  S  S  L  G  R  R  I  F  D  V  A  I  Q  :  G  R  V  V  L  R  D  F  N  I  M  E  E  A  N  G  V  G  K  V  I  T  K  D  F  P  D  V  T  V  S  S  T  L  E  I  H  L  Y  W  T  G  K  G  T  N  A  I  P  D  R  G  V  Y  G  P  L  I  S  A  I  T  V  T  P  :  N  F  K  V  E  H  G  K  W  A  L  P  G  *  S  C  L  T  G  I  V  L  A  S  I  V  V  L  L  L  V  L  L  L  C  G  E  R  H  L  G  G  R  N  S  Q  E  E  L   : E  L  R  A  L  D  L  Q  T  G  H  F  R  L  R  Q  I  K  A  A  T  N  N  F  D  P  A  N  K  I  G  E  G  G  F  G  P  V  Y  K  :  G  V  L  A  D  G  A  I  I  A  V  K  Q  L  S  S  K  S  K  Q  G  N  R  E  F  V  N  E  I  G  M  I  S  A  L  Q  H  P  N  L  V  K  L  Y  G  C  C  I  E  G  N  Q  L  L  V  I  Y  E  Y  M  E  N  N  C  L  A  R  A  L  F   : G  R  D  D  Q  R  L  N  I  D  W  A  T  R  K  R  I  C  S  G  I  A  K  G  L  A  Y  L  H  E  E  S  R  L  K  I  V  H  R  D  I  K  C  T  N  V  L  L  D  K  D  L  N  A  K  I  S  D  F  G  L  A  K  L  D  E  E  E  N  T  H  I  S  T  R  I  A  G  T  V :   G  Y  M  A  P  E  Y  A  M  R  G  Y  L  T  D  K  A  D  V  Y  S  F  G  V  V  L  L  E  I  V  S  G  K  S  N  T  N  Y  R  P  K  E  E  F  V  Y  L  L  D  W  :  A  Y  V  L  Q  E  Q  G  N  L  L  E  L  V  D  P  R  L  G  T  N  Y  S  K  K  E  A  M  R  M  I  N  V  S  L  L  C  T  N  P  S  P  T  L  R  P  S  M  S  S  V  V  S  M  L  E  G  K  L  P  V  Q  A  P  I  I  K  R  T  T  S  D  D  E  M  R  F  K  S  F  E  K  L  S  H  D  S  Q  T  T  Q  V  S  T  Y  S  </second_frame>
            <third_frame>   R  H  I  F  L  R  P  L  T  D  G  L  S  A  V  Q  E  C  T  W  V  F  K  L  P  V  I  L  H  Q  I  H  F  H  W  M  C  P  V  L  T  S  T  I  Q  H  A  L  P  L  I  P  S  N  I  M  G  F  A  Y  K  E  V  A  T  E  C  A  F  T  L  L  K  *  C  F  L  M  T  Q  H  I  A  A  L  E  G  G  Y  L  M  *  Q  Y  K :   G  E  *  F  *  G  I  S  T  L  W  R  K  L  T  V  L  G  K  S  L  P  R  T  F  L  M  L  L  L  V  A  L  W  R  F  I  C  I  G  P  G  R  G  L  T  L  F  Q  T  E  V  Y  M  D  H  *  F  Q  L  S  Q  *  P  Q :   T  L  K  L  N  T  G  S  G  L  Y  L  V  E  A  V  *  P  A  L  Y  S  L  Q  L  *  C  F  C  *  F  Y  C  S  V  E  K  G  I  L  E  G  E  I  A  K  K  N  *  :  N  S  E  P  L  I  Y  K  Q  V  I  L  D  L  D  K  L  K  L  L  L  I  T  L  I  L  P  T  K  L  V  K  E  G  L  D  Q  F  T  R :   V  Y  S  P  M  V  P  S  *  L  L  S  S  C  L  P  S  Q  S  K  E  I  V  N  L  S  M  R  *  A  *  F  Q  L  Y  N  T  Q  T  L  S  S  F  T  V  V  A  *  K  G  T  S  Y  *  *  Y  T  N  T  W  K  I  T  V  L  L  E  L  S  L  :  A  V  T  I  R  D  *  T  *  T  G  Q  P  E  K  G  Y  A  Q  E  *  Q  K  G  *  L  T  F  M  K  N  Q  G  *  K  S  S  I  E  I  *  S  V  R  M  C  F  L  I  R  I  *  T  R  R  F  Q  I  L  D  W  L  N  *  M  K  K  R  T  L  I  L  A  P  E  L  L  E  Q   : *  V  I  W  L  R  S  M  Q  *  E  A  T  *  Q  I  K  L  M  F  I  A  L  E  L  F  Y  *  R  L  S  V  G  K  A  T  Q  T  T  D  Q  K  R  N  L  F  T  F  L  T  G :   L  T  S  Y  K  N  R  E  I  C  *  N  *  L  I  H  V  S  V  P  I  T  P  K  K  R  Q  C  G  *  *  T  C  L  F  C  A  R  I  P  L  L  L  S  D  H  P  C  L  L  *  *  V  C  S  K  E  N  S  P  C  K  H  Q  *  S  N  V  L  H  Q  T  M  K  *  D  L  N  R  S  R  S  F  H  M  T  V  K  Q  H  K  Y  Q  H  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="63225" stop="63330"/>
                    <exon start="63660" stop="63778"/>
                    <exon start="63957" stop="64167"/>
                    <exon start="64253" stop="64490"/>
                    <exon start="64619" stop="64769"/>
                    <exon start="64861" stop="65148"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1113</number_coding_nucleotides>
                  <number_encoded_amino_acids>371</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SCLTGIVLASIVVLLLVLLLCGERHLGGRNSQEELELRALDLQTGHFRLRQIKAATNNFDPANKIGEGGFGPVYKGVLADGAIIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLVIYEYMENNCLARALFGRDDQRLNIDWATRKRICSGIAKGLAYLHEESRLKIVHRDIKCTNVLLDKDLNAKISDFGLAKLDEEENTHISTRIAGTVGYMAPEYAMRGYLTDKADVYSFGVVLLEIVSGKSNTNYRPKEEFVYLLDWAYVLQEQGNLLELVDPRLGTNYSKKEAMRMINVSLLCTNPSPTLRPSMSSVVSMLEGKLPVQAPIIKRTTSDDEMRFKSFEKLSHDSQTTQVSTYS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62479" stop="62763"/>
                    <exon start="62904" stop="63098"/>
                    <exon start="63183" stop="63224"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>519</number_coding_nucleotides>
                  <number_encoded_amino_acids>173</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PSYFSSPSDRWAFSSSGVYVGLQAASYIASNTFSLDVSGPDFYNTARLAPNSLKYYGLCLQGGSYRVRLHFAEIMFSNDSTYSSLGRRIFDVAIQGRVVLRDFNIMEEANGVGKVITKDFPDVTVSSTLEIHLYWTGKGTNAIPDRGVYGPLISAITVTPNFKVEHGKWALPG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="70220" PGL_stop="71039"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="70220" e_stop="71039"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.931"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.931">
            <gDNA_exon_boundary e_start="70220" e_stop="71039" e_length="820"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70220" stop="70959"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E462046" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70220" stop="70805"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E430543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70220" stop="70728"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465223" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70425" stop="71039"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372442" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="70425" stop="70913"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294173" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCGTTTTCTCTTAGGACAAATTTTACAGGCATTGATGGATCTTTCGTCACAAATGCTAGTAGATCAATCACATTGACAGGATGGGTTAAGTCATCCTACGGGAACATCACTACTAAGTCAGCTCAAGTTTTAAGTTATAGTAATTATATGGTGGAGGGTAACGGAGGAAATTTGCAAAATGTGGATCAGATTATTTATTTCAATGAAACTGTTGATGTCGTGAGGCCAACTTCATATGTTCAGTCTCGTAAGTCCTTCAAAAAGTTTCTGCTTCTCTTGCATTCTGACAATGTAGACAAAGGAGATGAAAGCTATGCCTCAATCTCAAATGTTACGTTGGGATTTGATGATAATAGGATAAAGACTTCCAAGAACGTATCGTCAGCCAGCTCTACTGAAAACATGCAAAAAGCACAGGGACATATTCTTGTAAAGGGGCAATTGGTTGTCAGTGGGATCGGGAGTACCCAACAAGTCTATAAATATAAGGATGATTCATTCTGCTACTCCAGGAACATAAGCAGCTCAAATTACACAATACATTATGATAAAGTTAGCGATAATTGCCCCAGAATCACTTTGTCTCGTTTGCCTTTCAGCTTTGGCAAATTTCAATCTGTTCCTGCTCGAAGGGTCTCTTTGGCATCTCATCTTGGTGATGTTAAAGATGGTGTCTGACATTGCTCCATTTTATTGTCTTCCACTCCTTCAACATAACAGTTCCTCTATGTTTACTGCTGTCAAAGAAGTTGTCAACTGTCACGGCCTTCCAATTATGATTGTAAGGCAATACTTCTGCATTGCCTCTTTTGTTTCTTG</gDNA_template>
            <first_frame> F  V  F  S  *  D  K  F  Y  R  H  *  W  I  F  R  H  K  C  *  *  I  N  H  I  D  R  M  G  *  V  I  L  R  E  H  H  Y  *  V  S  S  S  F  K  L  *  *  L  Y  G  G  G  *  R  R  K  F  A  K  C  G  S  D  Y  L  F  Q  *  N  C  *  C  R  E  A  N  F  I  C  S  V  S  *  V  L  Q  K  V  S  A  S  L  A  F  *  Q  C  R  Q  R  R  *  K  L  C  L  N  L  K  C  Y  V  G  I  *  *  *  *  D  K  D  F  Q  E  R  I  V  S  Q  L  Y  *  K  H  A  K  S  T  G  T  Y  S  C  K  G  A  I  G  C  Q  W  D  R  E  Y  P  T  S  L  *  I  *  G  *  F  I  L  L  L  Q  E  H  K  Q  L  K  L  H  N  T  L  *  *  S  *  R  *  L  P  Q  N  H  F  V  S  F  A  F  Q  L  W  Q  I  S  I  C  S  C  S  K  G  L  F  G  I  S  S  W  *  C  *  R  W  C  L  T  L  L  H  F  I  V  F  H  S  F  N  I  T  V  P  L  C  L  L  L  S  K  K  L  S  T  V  T  A  F  Q  L  *  L  *  G  N  T  S  A  L  P  L  L  F  L  </first_frame>
            <second_frame>  S  F  S  L  R  T  N  F  T  G  I  D  G  S  F  V  T  N  A  S  R  S  I  T  L  T  G  W  V  K  S  S  Y  G  N  I  T  T  K  S  A  Q  V  L  S  Y  S  N  Y  M  V  E  G  N  G  G  N  L  Q  N  V  D  Q  I  I  Y  F  N  E  T  V  D  V  V  R  P  T  S  Y  V  Q  S  R  K  S  F  K  K  F  L  L  L  L  H  S  D  N  V  D  K  G  D  E  S  Y  A  S  I  S  N  V  T  L  G  F  D  D  N  R  I  K  T  S  K  N  V  S  S  A  S  S  T  E  N  M  Q  K  A  Q  G  H  I  L  V  K  G  Q  L  V  V  S  G  I  G  S  T  Q  Q  V  Y  K  Y  K  D  D  S  F  C  Y  S  R  N  I  S  S  S  N  Y  T  I  H  Y  D  K  V  S  D  N  C  P  R  I  T  L  S  R  L  P  F  S  F  G  K  F  Q  S  V  P  A  R  R  V  S  L  A  S  H  L  G  D  V  K  D  G  V  *  H  C  S  I  L  L  S  S  T  P  S  T  *  Q  F  L  Y  V  Y  C  C  Q  R  S  C  Q  L  S  R  P  S  N  Y  D  C  K  A  I  L  L  H  C  L  F  C  F  L </second_frame>
            <third_frame>   R  F  L  L  G  Q  I  L  Q  A  L  M  D  L  S  S  Q  M  L  V  D  Q  S  H  *  Q  D  G  L  S  H  P  T  G  T  S  L  L  S  Q  L  K  F  *  V  I  V  I  I  W  W  R  V  T  E  E  I  C  K  M  W  I  R  L  F  I  S  M  K  L  L  M  S  *  G  Q  L  H  M  F  S  L  V  S  P  S  K  S  F  C  F  S  C  I  L  T  M  *  T  K  E  M  K  A  M  P  Q  S  Q  M  L  R  W  D  L  M  I  I  G  *  R  L  P  R  T  Y  R  Q  P  A  L  L  K  T  C  K  K  H  R  D  I  F  L  *  R  G  N  W  L  S  V  G  S  G  V  P  N  K  S  I  N  I  R  M  I  H  S  A  T  P  G  T  *  A  A  Q  I  T  Q  Y  I  M  I  K  L  A  I  I  A  P  E  S  L  C  L  V  C  L  S  A  L  A  N  F  N  L  F  L  L  E  G  S  L  W  H  L  I  L  V  M  L  K  M  V  S  D  I  A  P  F  Y  C  L  P  L  L  Q  H  N  S  S  S  M  F  T  A  V  K  E  V  V  N  C  H  G  L  P  I  M  I  V  R  Q  Y  F  C  I  A  S  F  V  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70221" stop="70898"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFSLRTNFTGIDGSFVTNASRSITLTGWVKSSYGNITTKSAQVLSYSNYMVEGNGGNLQNVDQIIYFNETVDVVRPTSYVQSRKSFKKFLLLLHSDNVDKGDESYASISNVTLGFDDNRIKTSKNVSSASSTENMQKAQGHILVKGQLVVSGIGSTQQVYKYKDDSFCYSRNISSSNYTIHYDKVSDNCPRITLSRLPFSFGKFQSVPARRVSLASHLGDVKDGV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="71211" PGL_stop="70534"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71211" e_stop="70534"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="71211" e_stop="70534" e_length="678"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71211" stop="70534"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E372441" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAGTGATTCAGGTAAATTGTAATATCACTTTAAGTATAATTCTCCCAGGGAAAACCACTGGTGACAATTTTAGTGAAGTTTAATCTTGGAATATCCAGCAACACAAATGCAAGGTGATGCTATTGTTTGAAACTTGTCTCTTATTGCACAAAGTGAAAACCCGAACAAACGCAAGAAACAAAAGAGGCAATGCAGAAGTATTGCCTTACAATCATAATTGGAAGGCCGTGACAGTTGACAACTTCTTTGACAGCAGTAAACATAGAGGAACTGTTATGTTGAAGGAGTGGAAGACAATAAAATGGAGCAATGTCAGACACCATCTTTAACATCACCAAGATGAGATGCCAAAGAGACCCTTCGAGCAGGAACAGATTGAAATTTGCCAAAGCTGAAAGGCAAACGAGACAAAGTGATTCTGGGGCAATTATCGCTAACTTTATCATAATGTATTGTGTAATTTGAGCTGCTTATGTTCCTGGAGTAGCAGAATGAATCATCCTTATATTTATAGACTTGTTGGGTACTCCCGATCCCACTGACAACCAATTGCCCCTTTACAAGAATATGTCCCTGTGCTTTTTGCATGTTTTCAGTAGAGCTGGCTGACGATACGTTCTTGGAAGTCTTTATCCTATTATCATCAAATCCCAACGTAACATTTGAGATTGAGGCAT</gDNA_template>
            <first_frame> K  V  I  Q  V  N  C  N  I  T  L  S  I  I  L  P  G  K  T  T  G  D  N  F  S  E  V  *  S  W  N  I  Q  Q  H  K  C  K  V  M  L  L  F  E  T  C  L  L  L  H  K  V  K  T  R  T  N  A  R  N  K  R  G  N  A  E  V  L  P  Y  N  H  N  W  K  A  V  T  V  D  N  F  F  D  S  S  K  H  R  G  T  V  M  L  K  E  W  K  T  I  K  W  S  N  V  R  H  H  L  *  H  H  Q  D  E  M  P  K  R  P  F  E  Q  E  Q  I  E  I  C  Q  S  *  K  A  N  E  T  K  *  F  W  G  N  Y  R  *  L  Y  H  N  V  L  C  N  L  S  C  L  C  S  W  S  S  R  M  N  H  P  Y  I  Y  R  L  V  G  Y  S  R  S  H  *  Q  P  I  A  P  L  Q  E  Y  V  P  V  L  F  A  C  F  Q  *  S  W  L  T  I  R  S  W  K  S  L  S  Y  Y  H  Q  I  P  T  *  H  L  R  L  R  H </first_frame>
            <second_frame>  K  *  F  R  *  I  V  I  S  L  *  V  *  F  S  Q  G  K  P  L  V  T  I  L  V  K  F  N  L  G  I  S  S  N  T  N  A  R  *  C  Y  C  L  K  L  V  S  Y  C  T  K  *  K  P  E  Q  T  Q  E  T  K  E  A  M  Q  K  Y  C  L  T  I  I  I  G  R  P  *  Q  L  T  T  S  L  T  A  V  N  I  E  E  L  L  C  *  R  S  G  R  Q  *  N  G  A  M  S  D  T  I  F  N  I  T  K  M  R  C  Q  R  D  P  S  S  R  N  R  L  K  F  A  K  A  E  R  Q  T  R  Q  S  D  S  G  A  I  I  A  N  F  I  I  M  Y  C  V  I  *  A  A  Y  V  P  G  V  A  E  *  I  I  L  I  F  I  D  L  L  G  T  P  D  P  T  D  N  Q  L  P  L  Y  K  N  M  S  L  C  F  L  H  V  F  S  R  A  G  *  R  Y  V  L  G  S  L  Y  P  I  I  I  K  S  Q  R  N  I  *  D  *  G   </second_frame>
            <third_frame>   S  D  S  G  K  L  *  Y  H  F  K  Y  N  S  P  R  E  N  H  W  *  Q  F  *  *  S  L  I  L  E  Y  P  A  T  Q  M  Q  G  D  A  I  V  *  N  L  S  L  I  A  Q  S  E  N  P  N  K  R  K  K  Q  K  R  Q  C  R  S  I  A  L  Q  S  *  L  E  G  R  D  S  *  Q  L  L  *  Q  Q  *  T  *  R  N  C  Y  V  E  G  V  E  D  N  K  M  E  Q  C  Q  T  P  S  L  T  S  P  R  *  D  A  K  E  T  L  R  A  G  T  D  *  N  L  P  K  L  K  G  K  R  D  K  V  I  L  G  Q  L  S  L  T  L  S  *  C  I  V  *  F  E  L  L  M  F  L  E  *  Q  N  E  S  S  L  Y  L  *  T  C  W  V  L  P  I  P  L  T  T  N  C  P  F  T  R  I  C  P  C  A  F  C  M  F  S  V  E  L  A  D  D  T  F  L  E  V  F  I  L  L  S  S  N  P  N  V  T  F  E  I  E  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0020C08.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71127" stop="70882"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>243</number_coding_nucleotides>
                  <number_encoded_amino_acids>81</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SWNIQQHKCKVMLLFETCLLLHKVKTRTNARNKRGNAEVLPYNHNWKAVTVDNFFDSSKHRGTVMLKEWKTIKWSNVRHHL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 207 chains have been computed
$ 
$ memory statistics:
$ 99760 bytes spliced alignments in total
$ 46 spliced alignments have been stored
$ 2168 bytes was the average size of a spliced alignment
$ 16968 bytes predicted gene locations in total
$ 10 predicted gene locations have been stored
$ 1696 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 251 backtrace matrices have been allocated
$ 
$ date finished: 2008-04-08 16:15:39
-->
