##gff-version 3
##sequence-region C12HBa0011D12.1 1 105818
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	5741	9299	0.992	-	0	ID=SGN-U318164_alignment_1;Target=SGN-U318164 1 1366 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	9235	9299	0.923	-	0	ID=GTH_SGN_U_tom_match_part_1;Parent=SGN-U318164_alignment_1;Target=SGN-U318164 1 65 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	8316	8443	0.992	-	0	ID=GTH_SGN_U_tom_match_part_2;Parent=SGN-U318164_alignment_1;Target=SGN-U318164 66 193 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	7690	7953	0.992	-	0	ID=GTH_SGN_U_tom_match_part_3;Parent=SGN-U318164_alignment_1;Target=SGN-U318164 194 455 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	7222	7492	0.993	-	0	ID=GTH_SGN_U_tom_match_part_4;Parent=SGN-U318164_alignment_1;Target=SGN-U318164 456 726 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	5741	6380	0.998	-	0	ID=GTH_SGN_U_tom_match_part_5;Parent=SGN-U318164_alignment_1;Target=SGN-U318164 727 1366 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	8351	9905	0.996	-	0	ID=SGN-U318162_alignment_1;Target=SGN-U318162 1 764 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	9235	9905	1.000	-	0	ID=GTH_SGN_U_tom_match_part_6;Parent=SGN-U318162_alignment_1;Target=SGN-U318162 1 671 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	8351	8443	0.968	-	0	ID=GTH_SGN_U_tom_match_part_7;Parent=SGN-U318162_alignment_1;Target=SGN-U318162 672 764 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	24005	26702	0.964	+	0	ID=SGN-U337416_alignment_1;Target=SGN-U337416 1 388 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	24005	24267	0.985	+	0	ID=GTH_SGN_U_tom_match_part_8;Parent=SGN-U337416_alignment_1;Target=SGN-U337416 1 263 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	24404	24466	0.921	+	0	ID=GTH_SGN_U_tom_match_part_9;Parent=SGN-U337416_alignment_1;Target=SGN-U337416 264 326 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	26641	26702	0.919	+	0	ID=GTH_SGN_U_tom_match_part_10;Parent=SGN-U337416_alignment_1;Target=SGN-U337416 327 388 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	24024	29168	0.997	+	0	ID=SGN-U321611_alignment_1;Target=SGN-U321611 1 1135 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	24024	24267	0.996	+	0	ID=GTH_SGN_U_tom_match_part_11;Parent=SGN-U321611_alignment_1;Target=SGN-U321611 1 244 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	24404	24466	1.000	+	0	ID=GTH_SGN_U_tom_match_part_12;Parent=SGN-U321611_alignment_1;Target=SGN-U321611 245 307 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	26641	26702	1.000	+	0	ID=GTH_SGN_U_tom_match_part_13;Parent=SGN-U321611_alignment_1;Target=SGN-U321611 308 369 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	28157	28238	1.000	+	0	ID=GTH_SGN_U_tom_match_part_14;Parent=SGN-U321611_alignment_1;Target=SGN-U321611 370 451 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	28334	28401	1.000	+	0	ID=GTH_SGN_U_tom_match_part_15;Parent=SGN-U321611_alignment_1;Target=SGN-U321611 452 519 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	28479	28562	1.000	+	0	ID=GTH_SGN_U_tom_match_part_16;Parent=SGN-U321611_alignment_1;Target=SGN-U321611 520 603 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	28638	29168	0.996	+	0	ID=GTH_SGN_U_tom_match_part_17;Parent=SGN-U321611_alignment_1;Target=SGN-U321611 604 1135 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	24200	27105	1.000	+	0	ID=SGN-U337417_alignment_1;Target=SGN-U337417 1 596 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	24200	24267	1.000	+	0	ID=GTH_SGN_U_tom_match_part_18;Parent=SGN-U337417_alignment_1;Target=SGN-U337417 1 68 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	24404	24466	1.000	+	0	ID=GTH_SGN_U_tom_match_part_19;Parent=SGN-U337417_alignment_1;Target=SGN-U337417 69 131 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	26641	27105	1.000	+	0	ID=GTH_SGN_U_tom_match_part_20;Parent=SGN-U337417_alignment_1;Target=SGN-U337417 132 596 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	30191	33236	0.998	+	0	ID=SGN-U327052_alignment_1;Target=SGN-U327052 1 1120 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	30191	30257	1.000	+	0	ID=GTH_SGN_U_tom_match_part_21;Parent=SGN-U327052_alignment_1;Target=SGN-U327052 1 67 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	31294	31692	1.000	+	0	ID=GTH_SGN_U_tom_match_part_22;Parent=SGN-U327052_alignment_1;Target=SGN-U327052 68 466 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	32287	32467	1.000	+	0	ID=GTH_SGN_U_tom_match_part_23;Parent=SGN-U327052_alignment_1;Target=SGN-U327052 467 647 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	32567	32655	1.000	+	0	ID=GTH_SGN_U_tom_match_part_24;Parent=SGN-U327052_alignment_1;Target=SGN-U327052 648 736 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	32748	32835	1.000	+	0	ID=GTH_SGN_U_tom_match_part_25;Parent=SGN-U327052_alignment_1;Target=SGN-U327052 737 824 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	32941	33236	0.993	+	0	ID=GTH_SGN_U_tom_match_part_26;Parent=SGN-U327052_alignment_1;Target=SGN-U327052 825 1120 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	35899	36853	0.939	-	0	ID=SGN-U337212_alignment_1;Target=SGN-U337212 31 590 -
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	36806	36853	0.979	-	0	ID=GTH_SGN_U_tom_match_part_27;Parent=SGN-U337212_alignment_1;Target=SGN-U337212 31 78 -
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	36611	36673	1.000	-	0	ID=GTH_SGN_U_tom_match_part_28;Parent=SGN-U337212_alignment_1;Target=SGN-U337212 79 141 -
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	36387	36440	1.000	-	0	ID=GTH_SGN_U_tom_match_part_29;Parent=SGN-U337212_alignment_1;Target=SGN-U337212 142 195 -
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	35899	36293	0.922	-	0	ID=GTH_SGN_U_tom_match_part_30;Parent=SGN-U337212_alignment_1;Target=SGN-U337212 196 590 -
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	35955	44526	0.996	-	0	ID=SGN-U320764_alignment_1;Target=SGN-U320764 1 1948 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	44351	44526	1.000	-	0	ID=GTH_SGN_U_tom_match_part_31;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1 176 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	43890	44274	1.000	-	0	ID=GTH_SGN_U_tom_match_part_32;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 177 561 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	42431	42511	1.000	-	0	ID=GTH_SGN_U_tom_match_part_33;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 562 642 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	41598	41671	0.986	-	0	ID=GTH_SGN_U_tom_match_part_34;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 643 716 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	41440	41515	1.000	-	0	ID=GTH_SGN_U_tom_match_part_35;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 717 792 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	41161	41228	1.000	-	0	ID=GTH_SGN_U_tom_match_part_36;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 793 860 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	40265	40388	1.000	-	0	ID=GTH_SGN_U_tom_match_part_37;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 861 984 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	39997	40083	1.000	-	0	ID=GTH_SGN_U_tom_match_part_38;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 985 1071 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	39202	39270	1.000	-	0	ID=GTH_SGN_U_tom_match_part_39;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1072 1140 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	38982	39118	1.000	-	0	ID=GTH_SGN_U_tom_match_part_40;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1141 1277 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	38204	38285	1.000	-	0	ID=GTH_SGN_U_tom_match_part_41;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1278 1359 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	38061	38081	1.000	-	0	ID=GTH_SGN_U_tom_match_part_42;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1360 1380 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	37830	37892	1.000	-	0	ID=GTH_SGN_U_tom_match_part_43;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1381 1443 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	36806	36853	1.000	-	0	ID=GTH_SGN_U_tom_match_part_44;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1444 1491 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	36611	36673	1.000	-	0	ID=GTH_SGN_U_tom_match_part_45;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1492 1554 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	36387	36440	1.000	-	0	ID=GTH_SGN_U_tom_match_part_46;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1555 1608 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	35955	36293	0.982	-	0	ID=GTH_SGN_U_tom_match_part_47;Parent=SGN-U320764_alignment_1;Target=SGN-U320764 1609 1948 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	49548	54936	0.995	+	0	ID=SGN-U323380_alignment_1;Target=SGN-U323380 1 2018 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	49548	50050	0.988	+	0	ID=GTH_SGN_U_tom_match_part_48;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 1 503 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	50957	51128	1.000	+	0	ID=GTH_SGN_U_tom_match_part_49;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 504 675 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	51845	51980	1.000	+	0	ID=GTH_SGN_U_tom_match_part_50;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 676 811 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	52093	52203	0.991	+	0	ID=GTH_SGN_U_tom_match_part_51;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 812 922 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	52283	52385	1.000	+	0	ID=GTH_SGN_U_tom_match_part_52;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 923 1025 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	52702	52845	0.979	+	0	ID=GTH_SGN_U_tom_match_part_53;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 1026 1170 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	52942	53049	1.000	+	0	ID=GTH_SGN_U_tom_match_part_54;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 1171 1278 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	53136	53232	1.000	+	0	ID=GTH_SGN_U_tom_match_part_55;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 1279 1375 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	53457	53582	1.000	+	0	ID=GTH_SGN_U_tom_match_part_56;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 1376 1501 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	53796	53928	1.000	+	0	ID=GTH_SGN_U_tom_match_part_57;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 1502 1634 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	54553	54936	0.997	+	0	ID=GTH_SGN_U_tom_match_part_58;Parent=SGN-U323380_alignment_1;Target=SGN-U323380 1635 2018 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	59036	60378	0.997	+	0	ID=SGN-U333076_alignment_1;Target=SGN-U333076 1 741 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	59036	59239	1.000	+	0	ID=GTH_SGN_U_tom_match_part_59;Parent=SGN-U333076_alignment_1;Target=SGN-U333076 1 204 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	59842	60378	0.996	+	0	ID=GTH_SGN_U_tom_match_part_60;Parent=SGN-U333076_alignment_1;Target=SGN-U333076 205 741 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	60374	61557	0.994	+	0	ID=SGN-U327991_alignment_1;Target=SGN-U327991 1 1078 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	60374	60588	1.000	+	0	ID=GTH_SGN_U_tom_match_part_61;Parent=SGN-U327991_alignment_1;Target=SGN-U327991 1 215 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	60695	61557	0.992	+	0	ID=GTH_SGN_U_tom_match_part_62;Parent=SGN-U327991_alignment_1;Target=SGN-U327991 216 1078 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	63881	67383	0.989	-	0	ID=SGN-U316186_alignment_1;Target=SGN-U316186 1 2005 -
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	65441	67383	0.998	-	0	ID=GTH_SGN_U_tom_match_part_63;Parent=SGN-U316186_alignment_1;Target=SGN-U316186 1 1943 -
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	63881	63944	0.703	-	0	ID=GTH_SGN_U_tom_match_part_64;Parent=SGN-U316186_alignment_1;Target=SGN-U316186 1944 2005 -
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	74263	78142	0.986	+	0	ID=SGN-U316887_alignment_1;Target=SGN-U316887 1 905 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	74263	74624	0.972	+	0	ID=GTH_SGN_U_tom_match_part_65;Parent=SGN-U316887_alignment_1;Target=SGN-U316887 1 360 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	76659	76833	1.000	+	0	ID=GTH_SGN_U_tom_match_part_66;Parent=SGN-U316887_alignment_1;Target=SGN-U316887 361 535 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	77522	77605	0.988	+	0	ID=GTH_SGN_U_tom_match_part_67;Parent=SGN-U316887_alignment_1;Target=SGN-U316887 536 619 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	77747	77988	0.996	+	0	ID=GTH_SGN_U_tom_match_part_68;Parent=SGN-U316887_alignment_1;Target=SGN-U316887 620 861 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	78099	78142	1.000	+	0	ID=GTH_SGN_U_tom_match_part_69;Parent=SGN-U316887_alignment_1;Target=SGN-U316887 862 905 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	78150	84441	0.986	+	0	ID=SGN-U325751_alignment_1;Target=SGN-U325751 1 1533 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	78150	78303	0.994	+	0	ID=GTH_SGN_U_tom_match_part_70;Parent=SGN-U325751_alignment_1;Target=SGN-U325751 1 154 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	79424	79503	1.000	+	0	ID=GTH_SGN_U_tom_match_part_71;Parent=SGN-U325751_alignment_1;Target=SGN-U325751 155 234 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	79692	79776	1.000	+	0	ID=GTH_SGN_U_tom_match_part_72;Parent=SGN-U325751_alignment_1;Target=SGN-U325751 235 319 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	80105	80236	1.000	+	0	ID=GTH_SGN_U_tom_match_part_73;Parent=SGN-U325751_alignment_1;Target=SGN-U325751 320 451 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	80310	80423	1.000	+	0	ID=GTH_SGN_U_tom_match_part_74;Parent=SGN-U325751_alignment_1;Target=SGN-U325751 452 565 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	80864	80908	1.000	+	0	ID=GTH_SGN_U_tom_match_part_75;Parent=SGN-U325751_alignment_1;Target=SGN-U325751 566 610 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	81001	81085	1.000	+	0	ID=GTH_SGN_U_tom_match_part_76;Parent=SGN-U325751_alignment_1;Target=SGN-U325751 611 695 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	83606	84441	0.976	+	0	ID=GTH_SGN_U_tom_match_part_77;Parent=SGN-U325751_alignment_1;Target=SGN-U325751 696 1533 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	84388	90375	0.996	-	0	ID=SGN-U316934_alignment_1;Target=SGN-U316934 1 1873 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	89897	90375	1.000	-	0	ID=GTH_SGN_U_tom_match_part_78;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 1 479 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	89645	89729	1.000	-	0	ID=GTH_SGN_U_tom_match_part_79;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 480 564 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	88338	88472	1.000	-	0	ID=GTH_SGN_U_tom_match_part_80;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 565 699 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	87333	87557	1.000	-	0	ID=GTH_SGN_U_tom_match_part_81;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 700 924 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	87068	87250	1.000	-	0	ID=GTH_SGN_U_tom_match_part_82;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 925 1107 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	86431	86654	1.000	-	0	ID=GTH_SGN_U_tom_match_part_83;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 1108 1331 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	86275	86320	1.000	-	0	ID=GTH_SGN_U_tom_match_part_84;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 1332 1377 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	86084	86185	1.000	-	0	ID=GTH_SGN_U_tom_match_part_85;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 1378 1479 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	84388	84781	0.982	-	0	ID=GTH_SGN_U_tom_match_part_86;Parent=SGN-U316934_alignment_1;Target=SGN-U316934 1480 1873 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match	94229	97604	1.000	+	0	ID=SGN-U317961_alignment_1;Target=SGN-U317961 1 1055 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	94229	94590	1.000	+	0	ID=GTH_SGN_U_tom_match_part_87;Parent=SGN-U317961_alignment_1;Target=SGN-U317961 1 362 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	match_part	96912	97604	1.000	+	0	ID=GTH_SGN_U_tom_match_part_88;Parent=SGN-U317961_alignment_1;Target=SGN-U317961 363 1055 +
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	5741	9905	.	-	0	ID=GTH_SGN_U_tom_gene_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	5741	9905	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	9235	9905	1.000	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	8316	8443	0.992	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	7690	7953	0.992	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	7222	7492	0.993	-	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	5741	6380	0.998	-	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	24005	29168	.	+	0	ID=GTH_SGN_U_tom_gene_2
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	24005	29168	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	24005	24267	0.996	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	24404	24466	1.000	+	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	26641	26702	1.000	+	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	28157	28238	1.000	+	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	28334	28401	1.000	+	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	28479	28562	1.000	+	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	28638	29168	0.996	+	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	24005	27105	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_2;Parent=GTH_SGN_U_tom_gene_2
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	24005	24267	0.985	+	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	24404	24466	1.000	+	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	26641	27105	1.000	+	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_2_AGS_2
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	30191	33236	.	+	0	ID=GTH_SGN_U_tom_gene_3
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	30191	33236	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	30191	30257	1.000	+	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	31294	31692	1.000	+	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	32287	32467	1.000	+	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	32567	32655	1.000	+	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	32748	32835	1.000	+	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	32941	33236	0.993	+	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	35899	44526	.	-	0	ID=GTH_SGN_U_tom_gene_4
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	35899	44526	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	44351	44526	1.000	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	43890	44274	1.000	-	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	42431	42511	1.000	-	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	41598	41671	0.986	-	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	41440	41515	1.000	-	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	41161	41228	1.000	-	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	40265	40388	1.000	-	0	ID=GTH_SGN_U_tom_exon_28;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	39997	40083	1.000	-	0	ID=GTH_SGN_U_tom_exon_29;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	39202	39270	1.000	-	0	ID=GTH_SGN_U_tom_exon_30;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	38982	39118	1.000	-	0	ID=GTH_SGN_U_tom_exon_31;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	38204	38285	1.000	-	0	ID=GTH_SGN_U_tom_exon_32;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	38061	38081	1.000	-	0	ID=GTH_SGN_U_tom_exon_33;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	37830	37892	1.000	-	0	ID=GTH_SGN_U_tom_exon_34;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	36806	36853	1.000	-	0	ID=GTH_SGN_U_tom_exon_35;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	36611	36673	1.000	-	0	ID=GTH_SGN_U_tom_exon_36;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	36387	36440	1.000	-	0	ID=GTH_SGN_U_tom_exon_37;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	35899	36293	0.922	-	0	ID=GTH_SGN_U_tom_exon_38;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	49548	54936	.	+	0	ID=GTH_SGN_U_tom_gene_5
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	49548	54936	.	+	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	49548	50050	0.988	+	0	ID=GTH_SGN_U_tom_exon_39;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	50957	51128	1.000	+	0	ID=GTH_SGN_U_tom_exon_40;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	51845	51980	1.000	+	0	ID=GTH_SGN_U_tom_exon_41;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	52093	52203	0.991	+	0	ID=GTH_SGN_U_tom_exon_42;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	52283	52385	1.000	+	0	ID=GTH_SGN_U_tom_exon_43;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	52702	52845	0.979	+	0	ID=GTH_SGN_U_tom_exon_44;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	52942	53049	1.000	+	0	ID=GTH_SGN_U_tom_exon_45;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	53136	53232	1.000	+	0	ID=GTH_SGN_U_tom_exon_46;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	53457	53582	1.000	+	0	ID=GTH_SGN_U_tom_exon_47;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	53796	53928	1.000	+	0	ID=GTH_SGN_U_tom_exon_48;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	54553	54936	0.997	+	0	ID=GTH_SGN_U_tom_exon_49;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	59036	61557	.	+	0	ID=GTH_SGN_U_tom_gene_6
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	59036	61557	.	+	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	59036	59239	1.000	+	0	ID=GTH_SGN_U_tom_exon_50;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	59842	60588	0.996	+	0	ID=GTH_SGN_U_tom_exon_51;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	60695	61557	0.992	+	0	ID=GTH_SGN_U_tom_exon_52;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	63881	67383	.	-	0	ID=GTH_SGN_U_tom_gene_7
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	63881	67383	.	-	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	65441	67383	0.998	-	0	ID=GTH_SGN_U_tom_exon_53;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	63881	63944	0.703	-	0	ID=GTH_SGN_U_tom_exon_54;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	74263	78142	.	+	0	ID=GTH_SGN_U_tom_gene_8
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	74263	78142	.	+	0	ID=GTH_SGN_U_tom_gene_8_AGS_1;Parent=GTH_SGN_U_tom_gene_8
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	74263	74624	0.972	+	0	ID=GTH_SGN_U_tom_exon_55;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	76659	76833	1.000	+	0	ID=GTH_SGN_U_tom_exon_56;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	77522	77605	0.988	+	0	ID=GTH_SGN_U_tom_exon_57;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	77747	77988	0.996	+	0	ID=GTH_SGN_U_tom_exon_58;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	78099	78142	1.000	+	0	ID=GTH_SGN_U_tom_exon_59;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	78150	84441	.	+	0	ID=GTH_SGN_U_tom_gene_9
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	78150	84441	.	+	0	ID=GTH_SGN_U_tom_gene_9_AGS_1;Parent=GTH_SGN_U_tom_gene_9
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	78150	78303	0.994	+	0	ID=GTH_SGN_U_tom_exon_60;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	79424	79503	1.000	+	0	ID=GTH_SGN_U_tom_exon_61;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	79692	79776	1.000	+	0	ID=GTH_SGN_U_tom_exon_62;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	80105	80236	1.000	+	0	ID=GTH_SGN_U_tom_exon_63;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	80310	80423	1.000	+	0	ID=GTH_SGN_U_tom_exon_64;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	80864	80908	1.000	+	0	ID=GTH_SGN_U_tom_exon_65;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	81001	81085	1.000	+	0	ID=GTH_SGN_U_tom_exon_66;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	83606	84441	0.976	+	0	ID=GTH_SGN_U_tom_exon_67;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	84388	90375	.	-	0	ID=GTH_SGN_U_tom_gene_10
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	84388	90375	.	-	0	ID=GTH_SGN_U_tom_gene_10_AGS_1;Parent=GTH_SGN_U_tom_gene_10
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	89897	90375	1.000	-	0	ID=GTH_SGN_U_tom_exon_68;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	89645	89729	1.000	-	0	ID=GTH_SGN_U_tom_exon_69;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	88338	88472	1.000	-	0	ID=GTH_SGN_U_tom_exon_70;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	87333	87557	1.000	-	0	ID=GTH_SGN_U_tom_exon_71;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	87068	87250	1.000	-	0	ID=GTH_SGN_U_tom_exon_72;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	86431	86654	1.000	-	0	ID=GTH_SGN_U_tom_exon_73;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	86275	86320	1.000	-	0	ID=GTH_SGN_U_tom_exon_74;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	86084	86185	1.000	-	0	ID=GTH_SGN_U_tom_exon_75;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	84388	84781	0.982	-	0	ID=GTH_SGN_U_tom_exon_76;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	gene	94229	97604	.	+	0	ID=GTH_SGN_U_tom_gene_11
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	mRNA	94229	97604	.	+	0	ID=GTH_SGN_U_tom_gene_11_AGS_1;Parent=GTH_SGN_U_tom_gene_11
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	94229	94590	1.000	+	0	ID=GTH_SGN_U_tom_exon_77;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C12HBa0011D12.1	GenomeThreader_SGN_U_tomato	exon	96912	97604	1.000	+	0	ID=GTH_SGN_U_tom_exon_78;Parent=GTH_SGN_U_tom_gene_11_AGS_1