<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-10 21:04:42"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U316565" ref_strand="+" ref_description="SGN-U316565        Tomato 200607 #1 [24 ESTs aligned] arabidopsis/peptide: | Symbol: None | CER1 protein, identical to maize gl1 homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467 from (Arabidopsis thaliana) | chr1:418778-422438 FORWARD | Aliases: None(evalue: 0, score=742) genbank/nr: gi|30678265|ref|NP_171723.2| CER1 protein [Arabidopsis thaliana](evalue: 0, score=742)">
      <seq>tctaaacctggaattctctcagaatggccatgggcaaaccttggcaactttaagtacttggtgttggcaccatttgttggtcatagcatatactcattcttgagggatggagatattggatacatagccatacttccatttctactcttcagatttattcacaaccagatatggatatcgttatcgcgccacaggactgctaagggtaataatagaattgttgatagaagcattgagtttgatcaagttgatagagaaaacaactgggatgatcaaattatatttaacgggctattatactatgttggatacctgagaatggaacaagttcatcacttgcctctatggagaagtggtggattcattgtaactgcattggcccatattggtcctgttgagtttatctattattggtttcatagagctctgcatcaccattttctctattcgcgttatcattctcatcatcactcctctattgttactcaacctatcagtgcatttattcatccgtttgctgaggtcgcatcatattatgccatctttgctgttcctgtaatcgcaactgaactcactgggactacttctatagctacaatcactctttatgttatctttactgatttcatgaacaacttgggccattgtaactttgaggtgattccaaagtggatcttctctctgtttccacctctcaagtacttgatatatacgtcctcgtaccactcactacatcacacgcaattcagaactaattattctcttttcatgccaatatatgactatatttttggtacaatggacaagtccagtgacacattgtatgaaaagtcacttgagaaaaaagcggaactgcctcatgtggttcaccttacacatctaacaaccttacaatccatctatcatctccgtctaggattttcatcgttggcctcaaagcctcacatgactagctctaagtggtatttgtggttaatgtggcctgtcacgctatggtcaatactcattacttggatttatagtcacacatttgttatcgagaggaatttgttcaaggatctcaaattacaaacttgggctattccaaagtttcgcaaacaatactttagtcaatggcaaagaaagagtattaataatttgatcaaggaagccatcatggaagcagatcagaaaggcgtaaaggttttgagcctcggactcttaaatcaggacgagaagttgaataacaatggtgaaatttgcataaggaagcatcctgagctgaaagttaaattggtagatggaagtagcctagttgttgctgtggttctcaactccattcctaaaggaacttcccaagtggtattacaagctggtcgtttgtccaaagttgctaatgctattgccctcgccttgtgtcaacgaggaattcaggttatcacgttagacgaagaagagtacaagggacttaaagcaaggtttacccctgaggctgcagctaatttggtcttgttgaaaagtacttgtgtttcaaagacgtggttagtagatgatggattgagtgaagatgaacaattgaaagcaccaaaaggaacattgtttattccttattcaccatttccaccaaagaaagttcgtgaggattgcttctacttgagcacaccagccatgatttgtccaaaacatgttcaaaatgtagactcttgtgagaactggctgccaagaagagtgatgagtgcatcgagaatagctggaattttgcacgcgtttgaaggttggaacgagcacgagtgtggtgacatgatgtttgatattgacaaagtatggaaagctagtcttgatcatggtttttcaccattagatgtagaaataatgtagattattattttgtaagatcacagttataagcttgtaataatggttaataattcctagcaactcaatggcctgtactatatgtaataaataacttttgacaaatttaaaagaccattattacctaaacacaaacatataaagatccatttttcattacaaaaatcaactttattaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="-" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="4550" stop="1038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4250" g_stop="4197" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="54" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4196" i_stop="4029" i_length="168">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.680" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4028" g_stop="3817" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="55" r_stop="266" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3816" i_stop="3732" i_length="85">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.561" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3731" g_stop="3499" g_length="233"/>
          <reference_exon_boundary r_type="cDNA" r_start="267" r_stop="499" r_length="233" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3498" i_stop="3429" i_length="70">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.553" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3428" g_stop="3209" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="719" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="3208" i_stop="3127" i_length="82">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.890" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3126" g_stop="2745" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="720" r_stop="1101" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="2744" i_stop="2672" i_length="73">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.939" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="2671" g_stop="2564" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1102" r_stop="1209" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="2563" i_stop="2425" i_length="139">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="2424" g_stop="2221" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1210" r_stop="1413" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="2220" i_stop="2127" i_length="94">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="2126" g_stop="2025" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1414" r_stop="1515" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="2024" i_stop="1939" i_length="86">
            <donor d_prob="0.713" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="1938" g_stop="1765" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1516" r_stop="1689" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="1764" i_stop="1681" i_length="84">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="1680" g_stop="1345" g_length="336"/>
          <reference_exon_boundary r_type="cDNA" r_start="1690" r_stop="2025" r_length="336" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2031" polyA_stop="2058"/>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="-" ref_id="SGN-U316565" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2025</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316565" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4250" e_stop="4197"/>
          <exon e_start="4028" e_stop="3817"/>
          <exon e_start="3731" e_stop="3499"/>
          <exon e_start="3428" e_stop="3209"/>
          <exon e_start="3126" e_stop="2745"/>
          <exon e_start="2671" e_stop="2564"/>
          <exon e_start="2424" e_stop="2221"/>
          <exon e_start="2126" e_stop="2025"/>
          <exon e_start="1938" e_stop="1765"/>
          <exon e_start="1680" e_stop="1345"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTAAACCTGGAATTCTCTCAGAATGGCCATGGGCAAACCTTGGCAACTTTAAGGTACATATATGTTGTTTTGCAGTACACATCAAAAACTTTTTCTTATTGTTGTGTTTCTAATATAATTAATGCATTATATCGATCATAATTTCTATGTCATCTAAAAGTTTAAGTCAGTAGTTTATTTATGTTAGCTAATTAATTATGTTGTTGTTTTTTGGTATGAAGTACTTGGTGTTGGCACCATTTGTTGGTCATAGCATATACTCATTCTTGAGGGATGGAGATATTGGATACATAGCCATACTTCCATTTCTACTCTTCAGATTTATTCACAACCAGATATGGATATCGTTATCGCGCCACAGGACTGCTAAGGGTAATAATAGAATTGTTGATAGAAGCATTGAGTTTGATCAAGTTGATAGAGAAAACAACTGGTAACTCATGATATATACTGTACTTTTAATTTTGAAACCCTTATGTTTACAAAGGATTTAAGTGAAAGGTTGAATTTTTATGTAGGGATGATCAAATTATATTTAACGGGCTATTATACTATGTTGGATACCTGAGAATGGAACAAGTTCATCACTTGCCTCTATGGAGAAGTGGTGGATTCATTGTAACTGCATTGGCCCATATTGGTCCTGTTGAGTTTATCTATTATTGGTTTCATAGAGCTCTGCATCACCATTTTCTCTATTCGCGTTATCATTCTCATCATCACTCCTCTATTGTTACTCAACCTATCAGTGGTAAGTCCGTCTTTTAACTAGCTAGTAAAGACCTTTTATTTCATGAACTAAAAGGGATGTATTTTGACAGCATTTATTCATCCGTTTGCTGAGGTCGCATCATATTATGCCATCTTTGCTGTTCCTGTAATCGCAACTGAACTCACTGGGACTACTTCTATAGCTACAATCACTCTTTATGTTATCTTTACTGATTTCATGAACAACTTGGGCCATTGTAACTTTGAGGTGATTCCAAAGTGGATCTTCTCTCTGTTTCCACCTCTCAAGTACTTGATATATACGTCCTCGTGAGTAATCTTCTTACCTCTCCCTACACATATACTCTCTGACGAATTTTTACACTATCACAACCTGTCGATGTCACTGCAGGTACCACTCACTACATCACACGCAATTCAGAACTAATTATTCTCTTTTCATGCCAATATATGACTATATTTTTGGTACAATGGACAAGTCCAGTGACACATTGTATGAAAAGTCACTTGAGAAAAAAGCGGAACTGCCTCATGTGGTTCACCTTACACATCTAACAACCTTACAATCCATCTATCATCTCCGTCTAGGATTTTCATCGTTGGCCTCAAAGCCTCACATGACTAGCTCTAAGTGGTATTTGTGGTTAATGTGGCCTGTCACGCTATGGTCAATACTCATTACTTGGATTTATAGTCACACATTTGTTATCGAGAGGAATTTGTTCAAGGATCTCAAATTACAAACTTGGGCTATTCCAAAGTTTCGCAAACAAGTAATAATCTATATCTTATTCAACATTGTTTTGGATCTGGTATCATTTATCATGATTATTTTTTTTTTAACAGTACTTTAGTCAATGGCAAAGAAAGAGTATTAATAATTTGATCAAGGAAGCCATCATGGAAGCAGATCAGAAAGGCGTAAAGGTTTTGAGCCTCGGACTCTTAAATCAGGCAAGTAAACTTAATGACTCTATTTGCCCCCTCTTTATGTGAGACGATTCAAGTTCAAAGGTCAAACTATCTAGTTTCAGATATAGAATCTTTAATCTTTTTAAAGATCTAACGAGCACAAATGAAACTTACTTTATAGGACGAGAAGTTGAATAACAATGGTGAAATTTGCATAAGGAAGCATCCTGAGCTGAAAGTTAAATTGGTAGATGGAAGTAGCCTAGTTGTTGCTGTGGTTCTCAACTCCATTCCTAAAGGAACTTCCCAAGTGGTATTACAAGCTGGTCGTTTGTCCAAAGTTGCTAATGCTATTGCCCTCGCCTTGTGTCAACGAGGAATTCAGGTATTCATAATCTTCTTACACTGTCCTAGCTCCCTTGACTTTGGTTTTTCTTTTAATTTCTCCAATCCATCGTAAATTTTGTACACATATATAGGTTATCACGTTAGACGAAGAAGAGTACAAGGGACTTAAAGCAAGGTTTACCCCTGAGGCTGCAGCTAATTTGGTCTTGTTGAAAAGTACTTGTGTTTCAAAGGTAGTACAGTACTATAACATATAATAATCGTGATATAATTCAAGAATTAGCAAGTTGTTGATTGATTTTGACGCGATATATTGCAGACGTGGTTAGTAGATGATGGATTGAGTGAAGATGAACAATTGAAAGCACCAAAAGGAACATTGTTTATTCCTTATTCACCATTTCCACCAAAGAAAGTTCGTGAGGATTGCTTCTACTTGAGCACACCAGCCATGATTTGTCCAAAACATGTTCAAAATGTAGACTCTTGTGAGGTCAGAAAGGATTATTCATAGTAAATTCTTTTTTTCAAGTTTTGTTTGTTAATTGACGATTGATTTTTTGTCTTTTAATTGAAGAACTGGCTGCCAAGAAGAGTGATGAGTGCATCGAGAATAGCTGGAATTTTGCACGCGTTTGAAGGTTGGAACGAGCACGAGTGTGGTGACATGATGTTTGATATTGACAAAGTATGGAAAGCTAGTCTTGATCATGGTTTTTCACCATTAGATGTAGAAATAATGTAGATTATTATTTTGTAAGATCACAGTTATAAGCTTGTAATAATGGTTAATAATTCCTAGCAACTCAATGGCCTGTACTATATGTAATAAATAACTTTTGACAAATTTAAAAGACCATTATTACCTAAACACAAACATATAAGGATCCATTTTTCATTACAAAAATCAACT</genome_strand>
        <mrna_strand>TCTAAACCTGGAATTCTCTCAGAATGGCCATGGGCAAACCTTGGCAACTTTAAG........................................................................................................................................................................TACTTGGTGTTGGCACCATTTGTTGGTCATAGCATATACTCATTCTTGAGGGATGGAGATATTGGATACATAGCCATACTTCCATTTCTACTCTTCAGATTTATTCACAACCAGATATGGATATCGTTATCGCGCCACAGGACTGCTAAGGGTAATAATAGAATTGTTGATAGAAGCATTGAGTTTGATCAAGTTGATAGAGAAAACAACTG.....................................................................................GGATGATCAAATTATATTTAACGGGCTATTATACTATGTTGGATACCTGAGAATGGAACAAGTTCATCACTTGCCTCTATGGAGAAGTGGTGGATTCATTGTAACTGCATTGGCCCATATTGGTCCTGTTGAGTTTATCTATTATTGGTTTCATAGAGCTCTGCATCACCATTTTCTCTATTCGCGTTATCATTCTCATCATCACTCCTCTATTGTTACTCAACCTATCAGTG......................................................................CATTTATTCATCCGTTTGCTGAGGTCGCATCATATTATGCCATCTTTGCTGTTCCTGTAATCGCAACTGAACTCACTGGGACTACTTCTATAGCTACAATCACTCTTTATGTTATCTTTACTGATTTCATGAACAACTTGGGCCATTGTAACTTTGAGGTGATTCCAAAGTGGATCTTCTCTCTGTTTCCACCTCTCAAGTACTTGATATATACGTCCTC..................................................................................GTACCACTCACTACATCACACGCAATTCAGAACTAATTATTCTCTTTTCATGCCAATATATGACTATATTTTTGGTACAATGGACAAGTCCAGTGACACATTGTATGAAAAGTCACTTGAGAAAAAAGCGGAACTGCCTCATGTGGTTCACCTTACACATCTAACAACCTTACAATCCATCTATCATCTCCGTCTAGGATTTTCATCGTTGGCCTCAAAGCCTCACATGACTAGCTCTAAGTGGTATTTGTGGTTAATGTGGCCTGTCACGCTATGGTCAATACTCATTACTTGGATTTATAGTCACACATTTGTTATCGAGAGGAATTTGTTCAAGGATCTCAAATTACAAACTTGGGCTATTCCAAAGTTTCGCAAACAA.........................................................................TACTTTAGTCAATGGCAAAGAAAGAGTATTAATAATTTGATCAAGGAAGCCATCATGGAAGCAGATCAGAAAGGCGTAAAGGTTTTGAGCCTCGGACTCTTAAATCAG...........................................................................................................................................GACGAGAAGTTGAATAACAATGGTGAAATTTGCATAAGGAAGCATCCTGAGCTGAAAGTTAAATTGGTAGATGGAAGTAGCCTAGTTGTTGCTGTGGTTCTCAACTCCATTCCTAAAGGAACTTCCCAAGTGGTATTACAAGCTGGTCGTTTGTCCAAAGTTGCTAATGCTATTGCCCTCGCCTTGTGTCAACGAGGAATTCAG..............................................................................................GTTATCACGTTAGACGAAGAAGAGTACAAGGGACTTAAAGCAAGGTTTACCCCTGAGGCTGCAGCTAATTTGGTCTTGTTGAAAAGTACTTGTGTTTCAAAG......................................................................................ACGTGGTTAGTAGATGATGGATTGAGTGAAGATGAACAATTGAAAGCACCAAAAGGAACATTGTTTATTCCTTATTCACCATTTCCACCAAAGAAAGTTCGTGAGGATTGCTTCTACTTGAGCACACCAGCCATGATTTGTCCAAAACATGTTCAAAATGTAGACTCTTGTGAG....................................................................................AACTGGCTGCCAAGAAGAGTGATGAGTGCATCGAGAATAGCTGGAATTTTGCACGCGTTTGAAGGTTGGAACGAGCACGAGTGTGGTGACATGATGTTTGATATTGACAAAGTATGGAAAGCTAGTCTTGATCATGGTTTTTCACCATTAGATGTAGAAATAATGTAGATTATTATTTTGTAAGATCACAGTTATAAGCTTGTAATAATGGTTAATAATTCCTAGCAACTCAATGGCCTGTACTATATGTAATAAATAACTTTTGACAAATTTAAAAGACCATTATTACCTAAACACAAACATATAAAGATCCATTTTTCATTACAAAAATCAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U316566" ref_strand="+" ref_description="SGN-U316566        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | CER1 protein, identical to maize gl1 homolog (glossy1 locus) GI:1209703 and CER1 GI:1199467 from (Arabidopsis thaliana) | chr1:418778-422438 FORWARD | Aliases: T6A9.16, AT1G02200(evalue: 2e-57, score=138) genbank/nr: Sterol(evalue: 2e-55, score=147)">
      <seq>gatgtattttgacagcatttattcatccgtttgctgaggtcgcatcatattatgccatctttgctgttcctgtaatcgcaactgaactcactgggactacttctatagctacaatcactctttatgttatctttactgatttcatgaacaacttgggccattgtaactttgaggtgattccaaagtggatcttctctctgtttccacctctcaagtacttgatatatacgtcctcgtgagtaatcttcttacctctccctacacatatactctctgacgaatttttacactatcacaacctgtcgatgtcactgcaggtaccactcactacatcacacgcaattcagaactaattattctcttttcatgccaatatatgactatatttttggtacaatggacaagtccagtgacacattgtatgaaaagtcacttgagaaaaaagcggaactgcctcatgtggttcaccttacacatctaacaaccttacaatccatctatcatctccgtctaggattttcatcgttggcctcaaagcctcacatgactagctctaagtggtatttgtggttaatgtggcctgtcacgctatggtcaatactcattacttggatttatagtcacacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="-" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="3743" stop="2516"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3443" g_stop="2816" g_length="628"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="628" r_length="628" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="-" ref_id="SGN-U316566" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316566" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3443" e_stop="2816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATGTATTTTGACAGCATTTATTCATCCGTTTGCTGAGGTCGCATCATATTATGCCATCTTTGCTGTTCCTGTAATCGCAACTGAACTCACTGGGACTACTTCTATAGCTACAATCACTCTTTATGTTATCTTTACTGATTTCATGAACAACTTGGGCCATTGTAACTTTGAGGTGATTCCAAAGTGGATCTTCTCTCTGTTTCCACCTCTCAAGTACTTGATATATACGTCCTCGTGAGTAATCTTCTTACCTCTCCCTACACATATACTCTCTGACGAATTTTTACACTATCACAACCTGTCGATGTCACTGCAGGTACCACTCACTACATCACACGCAATTCAGAACTAATTATTCTCTTTTCATGCCAATATATGACTATATTTTTGGTACAATGGACAAGTCCAGTGACACATTGTATGAAAAGTCACTTGAGAAAAAAGCGGAACTGCCTCATGTGGTTCACCTTACACATCTAACAACCTTACAATCCATCTATCATCTCCGTCTAGGATTTTCATCGTTGGCCTCAAAGCCTCACATGACTAGCTCTAAGTGGTATTTGTGGTTAATGTGGCCTGTCACGCTATGGTCAATACTCATTACTTGGATTTATAGTCACACAT</genome_strand>
        <mrna_strand>GATGTATTTTGACAGCATTTATTCATCCGTTTGCTGAGGTCGCATCATATTATGCCATCTTTGCTGTTCCTGTAATCGCAACTGAACTCACTGGGACTACTTCTATAGCTACAATCACTCTTTATGTTATCTTTACTGATTTCATGAACAACTTGGGCCATTGTAACTTTGAGGTGATTCCAAAGTGGATCTTCTCTCTGTTTCCACCTCTCAAGTACTTGATATATACGTCCTCGTGAGTAATCTTCTTACCTCTCCCTACACATATACTCTCTGACGAATTTTTACACTATCACAACCTGTCGATGTCACTGCAGGTACCACTCACTACATCACACGCAATTCAGAACTAATTATTCTCTTTTCATGCCAATATATGACTATATTTTTGGTACAATGGACAAGTCCAGTGACACATTGTATGAAAAGTCACTTGAGAAAAAAGCGGAACTGCCTCATGTGGTTCACCTTACACATCTAACAACCTTACAATCCATCTATCATCTCCGTCTAGGATTTTCATCGTTGGCCTCAAAGCCTCACATGACTAGCTCTAAGTGGTATTTGTGGTTAATGTGGCCTGTCACGCTATGGTCAATACTCATTACTTGGATTTATAGTCACACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315125" ref_strand="+" ref_description="SGN-U315125        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: AT3G12120.1 | Symbol: None | omega-6 fatty acid desaturase, endoplasmic reticulum (FAD2) / delta-12 desaturase, identical to omega-6 fatty acid desaturase, endoplasmic reticulum (FAD2) SP:P46313 (Arabidopsis thaliana (Mouse-ear cress)) (Plant Cell 6:147-158(1994)) | chr3:3860291-3863036 REVERSE | Aliases: T21B14.6 (evalue: 2e-166, score=582) genbank/nr: gi|51556906|gb|AAT72296.2| microsomal omega-6-desaturase [Nicotiana tabacum] (evalue: 0, score=648)">
      <seq>gcggccaatcggccgaattagagttaagacatatcccttatctctctttaacttatacaaaagagtaaggctaaaagaattctcttttgatctttgctttttgctttgctttaatttagattaagcgcttatcattatatcaaaaaacattttaactttaacattttcttttcctaataatgaaaatatttaagtttgatttgccatgcatggttgaattgtattctaacttctgtttaataatattaatttcatattactttttatattataactatcatagtaaaccaaaatcatctctctttaacttatacaaaagaatctattttaggattgatcaagagaccatgggagctggtggaaatatgtctactccaacaactaaaaaaagtcatctccaaagagttccatcttcgaagcccccttttacacttggcgatgtgaagaaggccattcctcctcactgcttccaacgttctcttattcgatccttctcttatcttattcaagatctcatacttgtctccgtcttctattatattgccaacacttacttccatctccttccatctccattaacttaccttgcctggcccgcttattggatcgcgcaaggttgtgtttccactgggatatgggtcattggacacgaatgtggtcatcatggcttcagtgattaccaatgggtagatgacactgttggtctcatcctacattctgcacttttaacaccatactttgcatggaagcatagtcatcggcgtcatcatgccaacactggctcccttgagaatgatgaagtgtacatacctaggtttaaatccaaactgagatggtactacaaatacttgaacaatccattaggacgagtattcgtacttgccttcaccctcacctttgcctggcctttatacttgatgttcaatatctcaggcaaaaaatatgaacgttttgcatgtcactatgatccaaatagcccaatctattctaaccgcgagagaatgcaaatctacatttcagatgcaggtgtgattgcagctacttatgtattataccgccttgctatgacacaagggctaacttgggttctgtgtatgtacggagtgcctctccttatcgtgaatggatttatagtgttgatcactcttatgcaccacactcatgcttcattgccacattatgattcatcggagtgggattatctaagaggagctttagctaccgtagatagagactatggtatactaaataaggtgttccataatgttactgatactcatgtcttgcatcatatattctcatacatatcacattaccatgcaatggaggcgaccaacgcgattaagccattgctaggagattattaccaagttgatgataccccaattttaaaggcaatgtggagggatacaaaggagtgcatctatgtagagaaggatgaaggatctcaaggtagaggtgtttattggtataaaaacaagctttgaaagtagaataccaagtaattggttaaatgttttaacctaataagaagatgcaagtattttgaataattatgtgtgtttttgttgtattttattgttaaatgttggttttagttgtcactaatgtattgttaaaataaaatatctacttatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="-" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="9814" stop="7618"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9489" g_stop="7956" g_length="1534"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="1619" r_length="1526" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="-" ref_id="SGN-U315125" ref_strand="+">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>1534</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315125" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9489" e_stop="7956"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTCTCTTTTGATGTTGGCATTAATTTAGATTAGGCGCTTATCGATCATCCTATCAAAAACTATATATGAATCTTTTAACACTTTCTTATCCTAATAATGAAAATTTTATTTATGTTTGATTTGCCATGCATGGTTGAATTGTATTCTAACTTCTGTTTAATAATATTAATTTCATATTACTTTTTATATTATAACTATCATAGTAAACCAAAATC--CAAAC-TTAATTGGTGC---AG-ATCTATTTTAGGATTGATCAAGAGACCATGGGAGCTGGTGGAAATATGTCTACTCCAACAACTAAAAAAAGTCATCTCCAAAGAGTTCCATCTTCGAAGCCCCCTTTTACACTTGGCGATGTGAAGAAGGCCATTCCTCCTCACTGCTTCCAACGTTCTCTTATTCGATCCTTCTCTTATCTTATTCAAGATCTCATACTTGTCTCCGTCTTCTATTATATTGCCAACACTTACTTCCATCTCCTTCCATCTCCATTAACTTACCTTGCCTGGCCCGCTTATTGGATCGCGCAAGGTTGTGTTTCCACTGGGATATGGGTCATTGGACACGAATGTGGTCATCATGGCTTCAGTGATTACCAATGGGTAGATGACACTGTTGGTCTCATCCTACATTCTGCACTTTTAACACCATACTTTGCATGGAAGCATAGTCATCGGCGTCATCATGCCAACACTGGCTCCCTTGAGAATGATGAAGTGTACATACCTAGGTTTAAATCCAAACTGAGATGGTACTACAAATACTTGAACAATCCATTAGGACGAGTATTCGTACTTGCCTTCACCCTCACCTTTGCCTGGCCTTTATACTTGATGTTCAATATCTCAGGCAAAAAATATGAACGTTTTGCATGTCACTATGATCCAAATAGCCCAATCTATTCTAACCGCGAGAGAATGCAAATCTACATTTCAGATGCAGGTGTGATTGCAGCTACTTATGTATTATACCGCCTTGCTATGACACAAGGGCTAACTTGGGTTCTGTGTATGTACGGAGTGCCTCTCCTTATCGTGAATGGATTTATAGTGTTGATCACTCTTATGCACCACACTCATGCTTCATTGCCACATTATGATTCATCGGAGTGGGATTATCTAAGAGGAGCTTTAGCTACCGTAGATAGAGACTATGGTATACTAAACAAGGTGTTCCATAATGTTACTGATACTCATGTCTTGCATCATATATTCTCATACATATCACATTACCATGCAATGGAGGCGACCAACGCGATTAAGCCATTGCTAGGAGATTATTACCAAGTTGATGATACCCCAATTTTAAAGGCAATGTGGAGGGATACAAAGGAGTGCATCTATGTAGAGAAGGACGAAGGATCTCAAGGAAGAGGTGTTTATTGGTATAAAAACAAGCTTTGAAAGTAGAATACCAAGTAATTGGTTAAATCTTTTAACCTAATAAGAAGATGCAAGTATTTTGAATAATTATGTGTGTTTTTGTTGTATTTTATTGTTAAATGTTGGTTTTAGTTGTTACTATTGTATTGTTAA</genome_strand>
        <mrna_strand>TTG-CT-TTTTGCT-TTG-CTTTAATTTAGATTAAGCGCTTATC-AT--T-ATATCAAAAA--ACATTTTAA-C-TTTAACATTTTCTTTTCCTAATAATGAAAA---TATTTAAGTTTGATTTGCCATGCATGGTTGAATTGTATTCTAACTTCTGTTTAATAATATTAATTTCATATTACTTTTTATATTATAACTATCATAGTAAACCAAAATCATCTCTCTTTAACTTATACAAAAGAATCTATTTTAGGATTGATCAAGAGACCATGGGAGCTGGTGGAAATATGTCTACTCCAACAACTAAAAAAAGTCATCTCCAAAGAGTTCCATCTTCGAAGCCCCCTTTTACACTTGGCGATGTGAAGAAGGCCATTCCTCCTCACTGCTTCCAACGTTCTCTTATTCGATCCTTCTCTTATCTTATTCAAGATCTCATACTTGTCTCCGTCTTCTATTATATTGCCAACACTTACTTCCATCTCCTTCCATCTCCATTAACTTACCTTGCCTGGCCCGCTTATTGGATCGCGCAAGGTTGTGTTTCCACTGGGATATGGGTCATTGGACACGAATGTGGTCATCATGGCTTCAGTGATTACCAATGGGTAGATGACACTGTTGGTCTCATCCTACATTCTGCACTTTTAACACCATACTTTGCATGGAAGCATAGTCATCGGCGTCATCATGCCAACACTGGCTCCCTTGAGAATGATGAAGTGTACATACCTAGGTTTAAATCCAAACTGAGATGGTACTACAAATACTTGAACAATCCATTAGGACGAGTATTCGTACTTGCCTTCACCCTCACCTTTGCCTGGCCTTTATACTTGATGTTCAATATCTCAGGCAAAAAATATGAACGTTTTGCATGTCACTATGATCCAAATAGCCCAATCTATTCTAACCGCGAGAGAATGCAAATCTACATTTCAGATGCAGGTGTGATTGCAGCTACTTATGTATTATACCGCCTTGCTATGACACAAGGGCTAACTTGGGTTCTGTGTATGTACGGAGTGCCTCTCCTTATCGTGAATGGATTTATAGTGTTGATCACTCTTATGCACCACACTCATGCTTCATTGCCACATTATGATTCATCGGAGTGGGATTATCTAAGAGGAGCTTTAGCTACCGTAGATAGAGACTATGGTATACTAAATAAGGTGTTCCATAATGTTACTGATACTCATGTCTTGCATCATATATTCTCATACATATCACATTACCATGCAATGGAGGCGACCAACGCGATTAAGCCATTGCTAGGAGATTATTACCAAGTTGATGATACCCCAATTTTAAAGGCAATGTGGAGGGATACAAAGGAGTGCATCTATGTAGAGAAGGATGAAGGATCTCAAGGTAGAGGTGTTTATTGGTATAAAAACAAGCTTTGAAAGTAGAATACCAAGTAATTGGTTAAATGTTTTAACCTAATAAGAAGATGCAAGTATTTTGAATAATTATGTGTGTTTTTGTTGTATTTTATTGTTAAATGTTGGTTTTAGTTGTCACTAATGTATTGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U323365" ref_strand="+" ref_description="SGN-U323365        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | SET domain-containing protein (ASHH3), low similarity to huntingtin interacting protein 1 (Homo sapiens) GI:12697196; contains Pfam profile PF00856: SET domain; identical to cDNA ASH1-like protein 3 (ASHH3) partial cds GI:15488419 | chr2:18265686-18268512 FORWARD | Aliases: F6E13.28(evalue: 1e-109, score=392) genbank/nr: gi|18406465|ref|NP_566010.1| SET-domain transcriptional regulator family [Arabidopsis thaliana] gi|15028059|gb|AAK76560.1| unknown protein [Arabidopsis thaliana] gi|20197070|gb|AAC23419.2| expressed protein [Arabidopsis thaliana] gi|20259301|gb|AAM14386.1| unknown protein [Arabidopsis thaliana](evalue: 1e-107, score=392)">
      <seq>gggaaccggtcaaggttgaaatttaactgggatgagcaataacaggctaagtggtcattagctcagatcagcttttcaggttatagtcaatcagtgttatatccagtgccagtcaaggtgatgcctgctatgaagactgctattcatggtgggattgggcacgtattcagcaaactaataaaggagattggtgatcctgttgactttgaacttccagattggttaaataaatggcagtcaatgccctatacctttattaagcgcaatatatacctcactaagaaggtaaagcgacgtctggaagatgatggtatattttgttcctgcagctcaacggcagaaacttctgttgtgtgtggcaaggattgtctctgtagcatgctatggtctagctgcacctcgggatgtaaatgtgggagttcttgtctgaataagccattccatcaacgtcctgtgaagaagatgaaaatagtgaagactgagaaatgtggcactgggattgtggcagatgaagatatcaagacaaaagagtttgttgtagagtatgttggagaagttattgatgacaagacatgtgaagagcgactttggaaattgaagcacagtggggaaacaaatttttacttgtgtgagatcaatagggatatggtgattgatgccacttataagggaaacaaatccacatacattaatcatagctgttgtccaaatactgagatgcagagatggatgattgatggtgagaatagaattggcatatttgcaacgcgtgacattaaaaggggcgagcatctgacctacgattatcagtttgttcaatttggtgcagatcaagattgtcactgtggtgctataaattgcaagcgaaagctgggaatcagacctaacaaactaaaacttccttcttcagatgctgctgcactaaagctagtggcatgccaggtagctgcgccctttcccaaagagaaagtactgctatcggcaaaacatgattctcaaactgaagttcccccacaangaaattggagttctgactctgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="-" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="33719" stop="25035"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="33418" g_stop="33348" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="79" r_length="71" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="33347" i_stop="32997" i_length="351">
            <donor d_prob="0.864" d_score="0.98"/>
            <acceptor a_prob="0.921" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="32996" g_stop="32941" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="80" r_stop="135" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="32940" i_stop="31285" i_length="1656">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31284" g_stop="31155" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="265" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31154" i_stop="30896" i_length="259">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="30895" g_stop="30784" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="266" r_stop="377" r_length="112" r_score="0.991"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="30783" i_stop="28520" i_length="2264">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.890" a_score="0.88"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="28519" g_stop="28420" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="378" r_stop="477" r_length="100" r_score="0.930"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="28419" i_stop="26122" i_length="2298">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26121" g_stop="26043" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="478" r_stop="556" r_length="79" r_score="0.873"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="26042" i_stop="25947" i_length="96">
            <donor d_prob="1.000" d_score="0.86"/>
            <acceptor a_prob="0.468" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="25946" g_stop="25775" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="557" r_stop="728" r_length="172" r_score="0.907"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="25774" i_stop="25667" i_length="108">
            <donor d_prob="0.882" d_score="0.92"/>
            <acceptor a_prob="0.988" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="25666" g_stop="25586" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="729" r_stop="809" r_length="81" r_score="0.914"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="25585" i_stop="25457" i_length="129">
            <donor d_prob="0.989" d_score="0.92"/>
            <acceptor a_prob="0.305" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="25456" g_stop="25284" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="810" r_stop="985" r_length="176" r_score="0.798"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="-" ref_id="SGN-U323365" ref_strand="+">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>974</cumulative_length_of_scored_exons>
        <coverage percentage="0.936" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323365" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="33418" e_stop="33348"/>
          <exon e_start="32996" e_stop="32941"/>
          <exon e_start="31284" e_stop="31155"/>
          <exon e_start="30895" e_stop="30784"/>
          <exon e_start="28519" e_stop="28420"/>
          <exon e_start="26121" e_stop="26043"/>
          <exon e_start="25946" e_stop="25775"/>
          <exon e_start="25666" e_stop="25586"/>
          <exon e_start="25456" e_stop="25284"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAAGGTTGAAATTTAACTGGGATGAGCAATAACAGGCTAAATGGTCATTAGCTCAGATCAGCTTTTCAGGTACACTCAAGAAATACTATGAATATAGATGAAGTGGTGGATAACGTATGGCGGAGAAAACTGAAGAGTCGAAATTCTATACTTGTCTTAAGATTATCCATTAAATGAGAGTAGCATGTGAAAGGAAGTGGTAATTTTGTGGTTGCATTATCAGAAACTTCATTGTCCCAGCAATGGCATAAATAAAACTGCTGAAGTCCTTAATTTATGCATTTTATTTTCATGAACTTCTTTTTAGTCTGCAATTTTATACTGATTGATGTGGTATTTTGTAAATCTTAATCTGCAATTTTCTACTTTGTATATCAGCTTCTCTGCACATCAATTGATTCCTTGTTTTACCATTATTAGGTTATAGTCAATCAGTGTTATATCCAGTGCCAGTCAAGGTGATGCCTGCTATGAAGGTTCAGATACTAACTTTTTCTGGTTCATACTCTTTGTCTGCATGTTGTCTATATCAATTTAACTTACAGAGATATTATGTCGAGTGATATCATATGCTGTGCTATATACTTATAATAATTATATTATGTGCTATACAAGTTACATTTTTTGTTCTACATATTTGAATCTCAATAATTTCTGCTCCCTCTTGGTATTTTTGTAATCAATGAAGCAACATAACTAGACCTCTAAAGGAGAAGATTTGGTGCGAGGCATTTGGTAAAGTCAGGACGTTTTGATATACTGCAAATTAAATAGTAAATTGACAGCTGCTGTAGTGACTCCAGTAAAGCCAAAAGACTAGCTAGCAGCTAGCCAGTGGCTTGAATTCAAGTCTGAGTTCAGTTCCTATCGAGGATAAAAGTGGGAATATTTATTTTGGAAGCATTAGTTTCTTCATTACCGCGGTGGGGACGAGTTCGCTTTTTCTACTTTCCATGGGTTAGGGGTGGGTGGTGTTTGCAGGTTTCGATTGGAACTCCAATTTGTCAAAATGCATTTTTCACAGCTTTAAATCATAAAATGCCCACTCCCTTGGACATGGTGATGTCCACTTAAATAATAGAATTGGGCATCCGAGTGTTGAAGACCAGAAAGAGTCAAATACGAGCATTCCTAGTGGACAATCGAGGAAACAAAACTTTCCTCCGAAGCTAATTAGGGATTCCTTTTTTCCCGGTTAATAATTAGGGGTTCCATTGCAATATATTTTCCTTGTAGTTCTACTCCAATTCAAGAAGTCTGAAACTTTTTCAAGTTGGTGATTCAGTAGCTTTTAGAACATATAATTTCTTATTCTGCTGGCTGGTTTGTCTGATTTAGGCATTTGCTTTTGTCTCCACATTCGTCCTTCATGTTTGCGAAATGTGAAGAAGAGAGTTTAATGATTTTTAATCCTGTTCGATTTAAATATATAGGAAATTGAGATACTCTTTTATGTTATTTGCATGACTAGCTAATATAGGCGAACATAGTGGATATGTAATCCTTGATTTCAATCCATCCACTACACACTTCCAGTCCTATGTGATGGTTCCATTTTCCTTTTTCCTATTTATTTTAGTGAAAGATCCTTGCATTTTATGTTGGCCTGAGATGCACCCAAGGGGGTGTGTGGCTTAGTGGTTAATGAAGTGGTTGAAAAACCATGAGATCTTGGGTTAAAATCCTAGTGGATGCAAAAAACATGGGGCAATTTCTTTCCATTTGGTTATGTGGCACGTGCCTTGGGCCATGTCCTTATGCTGATTGTGAAATTTTTTTGCCCGTAGTGCCGACAATGTTTGTTGGAACATTTTTTGAGTTAAATTTTGTAGTAGTTTTTATTTGATTATTATATTTGTAATTATTTTGATAATATATTGTAGCTAGAAAGATCCACTTAATGTAATTACAAAGCCCATTCCTTTTGTTTTTTTGGATGTTGGATTGTATTTAAGAAAAAATGGTTCTCTATGATTTAGTTCTTGAGCTTCTTTTACTTATTGACATATATAAAAAGTTGGGAATGCCATTGCTGATTCCGATCGTCTCAATCAATTGATTGGGAAGAGATTACTTTAGAATGCAAAAAAATATATCATCTTGTTAATATGCCTTTTTCTTTCCGTGGCCAGACTGCTATTCATGGTGGGATTGGGCACGTATTCAGCAAACTAATAAAGGAGATTGGTGATCCTGTTGACTTTGAACTTCCAGATTGGTTAAATAAATGGCAGTCAATGCCCTATACCTTTATTAAGCGCAGTATCCTTTCATTTGATGGTCTTGATATTTGTGACCTATGATATTCTTCACCTATCTATTAGATGTTCTTTCATATTGTGATAGTTTACATCTTACACGTACACTGTTCACTTCTGCATCTCTTGGATAAGATCTTTGTGCTTCATCTCATTTCCTTTTTCATTAAGGTTTTCTGTCTGACCTTCATAGTCCTTTATCTTTGTGATCTTTCTTTGTATCCTCTTTTTTTTCCTCTTCTGTTGGTATTAACTACTTGAAGATATATACCTCACTAAGAAGGTAAAGCGACGTCTGGAAGATGATGGTATATTTTGTTCCTGCAGCTCAACGGCAGAAACTTCTGTTGTGTGTGGCAAGGATTGTCTCTGTGGGTGAGGATGATTTTGATTAAGTTCCGTTGGCTGTCAGTAAACTGGAGAAGTGTTACATACATTTGTGGAAATATCAGCTCTATACATTAATTATTCTGGATGGTTCTTTAGCTGATAGCTTCCTGCTGTTACGTGCATTCCCTTTTCCGTTAAAGTCTTGTGTGAATATATTATATATAGCATGTTTTAGGTTCTTAGGCGTTTATACTTTTAATATAAATCCCAGTGACATTTTTGCTTATATTCTTGTGTTAGTCTTCTAGTCGTTCATTAGCTCCATGGTGTAATTTCTAGCTGCAGACCTAGAGGAGGCAACATAAAAGGTTTAGGTTTTGTGGATAAGATGAGGGAAGTGAGACTGAGAAGGTTTGGGCATTCGAAGAGGAAGTGCACAGAGGCCCAGTGAGGAGGTGTGAAAGGTTGGCCAGAGTGGGTTTTAGGAGAGGTAGAGGTAGGCCAAAGACGTATTTGGGAGAGGTGATTAAACAAGACATGGTTCAACTCTATCTTTCCGAGGACATGATCTTAGAGTTGTGGAGGTCGTTAATTAGGGTAGAAGGTGATTAGATAGTTGAGCATTGTCTCATTTCCTAGCCGGATAGGTTGGTGCATTGTATCTAACCCAAATAAAAACATAATCAAGACTATATATAAAAACTATAAACACCCTAGCTTTTTGTATTCTTAATTTCATACACATGCATTTGACATATTCTAATGCTTTAGTGATTCATGACCTTTAAATACTCTTAATCAATTTAAAATGTGTAAAAATAAATATAACGAAAAGAGAAAGGTTTGTTTCAATATATTCTTTATATACATAAATTAATTCACTTTATATATATAAGAAAAATAATTTTGTTCCTATCGAAAATAATATTTCTACCTCTCAAGATAAGAATAAGATTTGCATACACGATTTTTCTCAGATTCTACTTATGAAATTATACTTGCTATGTTATTACTGAATTTCACAACAACTTCATTTATATGTTTGTCTATTGATCTTAGCCACTAATATATCTTCTTCATTTGATTTGTTATTATAAGTCAAATTAATGGACATTGGGGTCTACAATTAGGAAGAAGAACTGTAGTATTTATTACGTGGAATGTTCTTTTCCATGCAACTAGCTAGACTTATGCGTGTATAAAGAAGGATTGAAGTTATATACGCTTAACATACAAAATCTTTTTGCAGTGTAGTTTAGCTTATTATAACATGTCCCTTTTTGTATTATCATGTTATTACTTAATATTTGTCATAAAACTTTACTTGTAATTACTTAACAAATTACGTATTATTAATGCATAAGACTTGAACTCGTAAATAACGATTAAACCTTAGTTTTCTTTCCCCTCTAGGTTCACACATGCACTGACTTGAGATGCATGTTGTACTAGAAATATAAAATTCCACACCATACAAAAGTACTAATTGTCAAAAGGGATCAAAAGGCCATGGATGAGTTGACAATCATACTACTACAAGTCTTCTAATGCTTTAACTAGATGGAGTAGGAACTCTAACTAGAAAATTTTAAAAAAGATAAATGGAAGTGTAGTAATCGAGATTCAAACTTATAATCTAAAGCAACTTTCGAAGTATCTTCATTCATACACAAAGAGTTCCTCTTGTATTAGGCGATTCAACTAACCTTGTATATTGGTAGGAGATGTGACACATCTCGTAGACCAAAATTCTTCTTTCGAGTTTCTTAGATTTGTGCCCTGTCCCATTGAAACTCTTTTAGTTTTGGATAGTGTTCTAATTTGTGTCACTTCTAGTCTTGCTACTATTTCTATTTTATGAACATCATGTATTATATGATCATATGTTATGTTTGGCATGAAAAAATGTATATATGAACAATTTCTTATCAGTTAAATCGAAAATTTAACTGCTAAACACCAAACACGGATTTACTGAAAATCGACAATAAATATCTTATTGGTTTGGTTACCGGTTTAGCCTGTTCACAAACTGAAAATTGATAAACCGAACCGACCGAAGCACACCCCTACATGTGACTAGTCTAGGCATTCATTTTCTTACATTTTAGATCGTTATGGTTTTATTTATTTTTTGGTTACTCTTATATTGTTCTAGATCTCTTTGGCAGTTCTTTTAGACGTGTTATATATATTTGCTTGATAAAAGGATAATCAGCTTAAAGATTTTATTTCAGCATTTTATTTGGGAAATTTGATACAGCTTTAGAGAAGTGTGTAATTTGTTTGACTTTTCGTAAATTTTACAGCATAATGTTGTCTAGCTGCTCCTCGGGTTGTAAATGTGGGAGTTCTTGTCTGAATAAGCCATTCCATCAACGTCCTGTGAAGAAGATGAAATTAGTGAAGGTAGACACTTAAAGAACTTCGAGCTGCTTCAGATAGTTGAACAAATATCCCCTGATGGATGCATTTTAACTACTTGATTGTTTTTAACTACTTCTCATTGAGATGACTGTTTGTGATGCCTTGTGGTGACTTTTGTAATTCTGAATTGTTCTATTTTGCAGTACCTCATTGGTACTCGCTTCAATAAATTTTACTTAAATTACCCAAATAAAATTGTTTTAAACTTCTTTGGAACCTTTGATATTTATCTTTCTCAAAAGAAGAACCTTTGTTGGACTAGAAAGTTGACCATTGACCTTGAGCTGTGATTTTGCCATAGCATAGACTTTCACTTCCTTGTATTTCTCAATTGAATTATACTTTTTTATGTGATTACTACCAACACATATGATAATTGTCCGATGTGGGTTATTGTTGATTATAGTGTGTCAGACTCAATATATATTTGTAAATTTCACACTGGCTGAGAATTTCTATAGCTGGCAAATAGAATGGAATAAGGTAAAATGGTTATAACTTTGGGAGGAAATCCATACTCATTGCGAAATGTTTCTTTGAATATCTTTTTTTACAATGATGTATCTTTTAATGTCTAAATGACTGGTTTTAGTATATGTTTTGTTTAGTATCTAAATTGTTTGATTTATAACCGGAAAATAATGTGTTCACAATTATTTAGTATTGATTAATATTGAAGTATATTACCACACATATCTAATGCATGATTCTAGTTTTAAGTTTTGAATAAGAATGTCAATTTCACATGTATTCAGAAAGTTTAGAACATTATGAACAGAACATGAAAACCTAGGACAAGAAATGCATAAACCATACGAATGAAGAAGATGAAGTGCAATAACAAAACTTGCACTTTTTCTTCGCTGAAACAATACCGTTAGGAGGAGGTCTTTATTTAACACACATTCGGAGCTTTTTGAATCTGGGAAAAAATACGTAGTTTTGATTTGAGATCGAACGAACCGTCCAAAGACAAATACCAAAATTGCAATTAACTTTAACAAAAGTATTCTAGACTTGCAAGTACACCCAACAATTATGGAGGATTTTATCAGCCTCAAAAGGCATTTTCTGGATCATGCCTAGGAAAGTGACTGAGGCCTTAATGAGCTGGGAGGAAGAGGGGGTCCCTGCAAAAGACAGAAGTAGATGGAGAATTATCCCTAGTGCTATATGGTGGGTTATCTGGAAAGAGAGGAATTCAACATGTGTTGAGAGCATACTGAACAATGTGCAGAAAGTTAAACTTAACTACTACTTTTTTAGTTTTTTGGTGTAATCAGTTATACTCAAATGAAACTATTTCTTATTATTGATGTTCTAGACTCAATTTGATCATAGAGCAGAGAAAATTGGAGTACACTTGTATTTAAGGTTTCAATACAACCCATTTGTTGTTTTGTGGTATAATACAAAGTTACCAAGTTAAAAAAAAAATATTTTGGACTTGGATAAATTTTCATCCTAGTGAATAGTCTCTTTCTATTCCTTTCTTGACAGTTGTTTCACCAAGTAAAGAAGCTCTTGAGTTCCCCATTTCAATTTTCATCAAAGTGTTGTCTAGAAATTCTTAAAGATAGAATGAATAGAAGTTTCACCAATTTTCTAGCACTTTGTACTCTTCATTTTCTGCATCTATTGGATGCCATCAATGAAATCAATTACTTTCATGAAAAACAAGAGAAAATGAAGGAAGTTCTATCAATGTTCTTGTTTGTGGTTTATTTCTTTAAGGGTTGCTGAATTATCCATGTGACGGTTGCAATTCCCTTATTCCTTCATTTTGGTTTACTTCTGCTTAAGTTTGTCTACTGCCAATTTTATTACCAGGAAAATACTGCCTAAAATTAGTCACCTAGAGAATTATGACTTTCCTTGTCATCAAGATAGAGACACTCATCCTACATCTGTTTTTGACCTAAACAGTGAATACCATTCTAACTTGGTCTCATTAACTTTTAGACCCTGAGCATGAGTGAAAAAATCAATGTTAAACACTGCATAGATGAACCTGATGTCTGATTATTTGTAGAGAATATCTGTAGAGCAGTCTTAGAGTTGTTACATTAAGAAAAAGGACGTCCAGAGGGGAGTGATTGTTTAATCTGTTTATTGTGTCATTTTGTGTCTCTCATGTATTTTGAAAGAAATTAGAAGAGGTTACATTATCACCTTTATTTCTTTGCTTTCTTTTAAAAAGTGTACAACGATCATATTCTTCCTCAAACTTTTGGTCATTATATACATGGTTGGTCAAGTTTGTTGACATGTAACATGCAGACTGAAAAATGTGGCTCTGGAATTGTGGCAGATGAAGATATCAAACGAGGAGACTTTGTTATAGAGTATGTTGGAGAAGGTGAGTTATTTCACTTTTTGATTATATTTTGAGGAATAATTTATGTTTTGTGCATTCTGAACTTCATTTAGCAAGGAAATATGCTTACCACTGCAGTTATTGATGACAAAACATGTGAAGAGAGGCTTTGGAAAATGAAGCATAGTGGAGAAACAAACTTCTACTTGTGTGAAATCAATCGGGATATGGTGATTGATGCCACTTACAAGGGCAACAAATCCCGATACATTAATCATAGTTGTTGTCCAAATACTGAGATGCAGAAATGGTATAGAAATAGCTAAATAATTAATCGTACTTCTATATTCTCAACCTCCATTCCCAGAGATTCAACTCTATATTACATTTCATTTCCATGTCCGCCTTTTTCTTTTAGGATGATTGATGGTGAAACAAGAATTGGCATATTTGCAACACGAGACATTAAAAGGGGCGAGCATCTGACCTATGATTACCAGTATGAAGCTGCTCTTTAATTTTACTTATTTCTTTTCCACCTGTAAGGTGTGCAGTGTGTTATTCTTCTGAGAGATTAAATAAACCTTCTTGGAATGTACATTGCATTTGAATCTAACAAGTGTAGCAGGTTTGTTCAGTTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGTAAGATGTAGGCGAAAGCTGGGCGTTAAACCTAACAAACCAAAACTCCCTGCTTCAGATAC--C-GCATTAAAGATAGTGGCATGTCAGGTGGCTGCCACCTCTCCCAAATTGAAAGCACTTCTATCTACAC</genome_strand>
        <mrna_strand>GTCAAGGTTGAAATTTAACTGGGATGAGCAATAACAGGCTAAGTGGTCATTAGCTCAGATCAGCTTTTCAG...............................................................................................................................................................................................................................................................................................................................................................GTTATAGTCAATCAGTGTTATATCCAGTGCCAGTCAAGGTGATGCCTGCTATGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGCTATTCATGGTGGGATTGGGCACGTATTCAGCAAACTAATAAAGGAGATTGGTGATCCTGTTGACTTTGAACTTCCAGATTGGTTAAATAAATGGCAGTCAATGCCCTATACCTTTATTAAGCGCA...................................................................................................................................................................................................................................................................ATATATACCTCACTAAGAAGGTAAAGCGACGTCTGGAAGATGATGGTATATTTTGTTCCTGCAGCTCAACGGCAGAAACTTCTGTTGTGTGTGGCAAGGATTGTCTCTGTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGCTATGGTCTAGCTGCACCTCGGGATGTAAATGTGGGAGTTCTTGTCTGAATAAGCCATTCCATCAACGTCCTGTGAAGAAGATGAAAATAGTGAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGAGAAATGTGGCACTGGGATTGTGGCAGATGAAGATATCAAGACAAAAGAGTTTGTTGTAGAGTATGTTGGAGAAG................................................................................................TTATTGATGACAAGACATGTGAAGAGCGACTTTGGAAATTGAAGCACAGTGGGGAAACAAATTTTTACTTGTGTGAGATCAATAGGGATATGGTGATTGATGCCACTTATAAGGGAAACAAATCCACATACATTAATCATAGCTGTTGTCCAAATACTGAGATGCAGAGATG............................................................................................................GATGATTGATGGTGAGAATAGAATTGGCATATTTGCAACGCGTGACATTAAAAGGGGCGAGCATCTGACCTACGATTATCA.................................................................................................................................GTTTGTTCAATTTGGTGCAGATCAAGATTGTCACTGTGGTGCTATAAATTGCAAGCGAAAGCTGGGAATCAGACCTAACAAACTAAAACTTCCTTCTTCAGATGCTGCTGCACTAAAGCTAGTGGCATGCCAGGTAGCTGCGCCCTTTCCCAAAGAGAAAGTACTGCTATCGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U315153" ref_strand="+" ref_description="SGN-U315153        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: EMB2394 | ribosomal protein L6 family protein, Similar to Mycobacterium RlpF (gb:Z84395). ESTs gb:T75785,gb:R30580,gb:T04698 come from this gene | chr1:1502343-1503826 REVERSE | Aliases: YUP8H12.20, YUP8H12_20, EMB2394, EMBRYO DEFECTIVE 2394(evalue: 1e-09, score=41.2) genbank/nr: gi|15220443|ref|NP_172011.1| ribosomal protein L6p family [Arabidopsis thaliana] gi|25295056|pir||C86186 hypothetical protein [imported] - Arabidopsis thaliana gi|2388578|gb|AAB71459.1| Similar to Mycobacterium RlpF (gb|Z84395). ESTs gb|T75785,gb|R30580,gb|T04698 come from this gene. [Arabidopsis thaliana] gi|13430706|gb|AAK25975.1| putative chloroplast 50S ribosomal protein L6 [Arabidopsis thaliana] gi|14532906|gb|AAK64135.1| putative chloroplast 50S ribosomal protein L6 [Arabidopsis thaliana] gi|21553840|gb|AAM62933.1| putative chloroplast 50S ribosomal protein L6 [Arabidopsis thaliana](evalue: 8e-08, score=41.2)">
      <seq>gagaactagtcccttgtttttatccacttatagtttattgttttgcccttactttaaatggtcaaactagccgttaactagtcgttgtagagttttaggagctttaataaagaactagtttaggtataataaccataaatcataaggtttttgatgctagtttatactagatgagcttgttgaatcctaggagatacgtttatatgattgaatatccttacagaaagtgtcatacacacgccttaagctagaagaatatccatgatttcaacaattagacgtgattttcaacttggaattttcatttacacgactctcgtctctgatgatgatgatcatcagtttcacagaattttgtgataaaggtatgattctgcaccccaaatgatttcctctcaacttcaaaagccataatatgtgtcttacaccaactctatcaaacattctgccaatacctacggactgtatataaaatttttcataatcttatcactgttgttatgttggtcaattctagtgacaatgtatagatgcacatattttgagtgtttactctgaagatgttctttttcttcatcaaactcggcaggactctaactgataacatggtagtcggcgtttccaaaggattcgagaagaaacttcattgggtanggggntggatatcgtgcaaccatcgaaaggaaagacatagttctcaatctcggattttctcatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="36653" stop="37966"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36950" g_stop="37666" g_length="717"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="718" r_length="718" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U315153" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>717</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315153" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36950" e_stop="37666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGAAGTGTCCCTTGTTTTTATCCACTTATAGTTTATTGTTTTGCCCTTACTTTAAATGGTCAAACTAGCCGTTAACTAGTCGTTGTAGAGTTTTAGGAGCTTTAATAAAGAACTAGTTTAGGTATAATAACCATAAATCATAAGGTTTTTGATGCTAGTTTATACTAGATGAGCTTGTTGAATCCTAGGAGATACGTTTATATGATTGAATATCCTTACAGAAAGTGTCATACACACGCCTTAAGCTAGAAGAATATCCATGATTTCAACAATTAGACGTGATTTTCAACTTGGAATTTTCATTTACACGACTCTCGTCTCTGATGATGATGATCATCAGTTTCACAGAATTTTGTGATAAAGGTATGATTCTGCACCCCAAATGATTTCCTCTCAACTTCAAAAGCCATAATATGTGTCTTACACCAACTCTATCAAACATTCTGCCAATACCTACGGACTGTATATAAAATTTTTCATAATCTTATCACTGTTGTTATGTTGGTCAATTCTAGTGACAATGTATAGATGCACATATTTTGAGTGTTTACTCTGAAGATGTTCTTTTTCTTCATCAAACTCGGCAGGACTCTAACTGATAACATGGTAGTCGGCGTTTCCAAAGGATTCGAGAAGAAACTTCAATTGGTA-GGGGTTGGATATCGTGCAACCATCGAAGGGAAAGACATAGTTCTCAATCTCGGATTTTCTCATC</genome_strand>
        <mrna_strand>GAGAACTAGTCCCTTGTTTTTATCCACTTATAGTTTATTGTTTTGCCCTTACTTTAAATGGTCAAACTAGCCGTTAACTAGTCGTTGTAGAGTTTTAGGAGCTTTAATAAAGAACTAGTTTAGGTATAATAACCATAAATCATAAGGTTTTTGATGCTAGTTTATACTAGATGAGCTTGTTGAATCCTAGGAGATACGTTTATATGATTGAATATCCTTACAGAAAGTGTCATACACACGCCTTAAGCTAGAAGAATATCCATGATTTCAACAATTAGACGTGATTTTCAACTTGGAATTTTCATTTACACGACTCTCGTCTCTGATGATGATGATCATCAGTTTCACAGAATTTTGTGATAAAGGTATGATTCTGCACCCCAAATGATTTCCTCTCAACTTCAAAAGCCATAATATGTGTCTTACACCAACTCTATCAAACATTCTGCCAATACCTACGGACTGTATATAAAATTTTTCATAATCTTATCACTGTTGTTATGTTGGTCAATTCTAGTGACAATGTATAGATGCACATATTTTGAGTGTTTACTCTGAAGATGTTCTTTTTCTTCATCAAACTCGGCAGGACTCTAACTGATAACATGGTAGTCGGCGTTTCCAAAGGATTCGAGAAGAAACTTCATTGGGTANGGGGNTGGATATCGTGCAACCATCGAAAGGAAAGACATAGTTCTCAATCTCGGATTTTCTCATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U328575" ref_strand="+" ref_description="SGN-U328575        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT1G15520.1 | Symbol: PDR12 | ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots. | chr1:5331988-5338170 REVERSE | Aliases: T16N11.3, T16N11_3, PDR12, PLEIOTROPIC DRUG RESISTANCE 12 (evalue: 0, score=976) genbank/nr: gi|20522008|dbj|BAB92011.1| pleiotropic drug resistance like protein [Nicotiana tabacum](evalue: 0, score=1151)">
      <seq>tttggttcaaaatggagctaactaattcaagaggtactagtttaagagaaaaaataatcaggggaagtagtttgagagggagcttaagtagaaagaggaatagtactaacaactccaggtggaatggcaatgatggggagatttttaatcgttcaacgagagacgaagatgatgaagaggctcttaaatgggcagctcttgaaaaacttccaacgtttgatcgtttgagaaaaggtctcttgtttggatcacaaggtgcatctgctgaaattgatatacatgatattggttttcaagaaagaaacaagttgcttgaaaggcttgtcaaagttgcagatgaggataatgagaagctcctgttgaaactcaagcaaagaattgacagagttgggatagatttgcctgaaatagaagtaagatatgagcatttaactattgaggcagatgcatatgtaggaagtagagctttgcctacatttatcaactttatctctaatttttttgaggatatattgaactctgtccatatcctaccgagtcgaaagaggaaactaactattcttaatgatgtgagtggtatcattaagcctcgcagattgactttgcttttaggacctccaagttccgggaaaactacattattattagctttggccggaaagctcgactctgcccttaaggttactggaaaagtgacctataatggacatgaaatgaatgagtttgtgccgcaaagaacagctgcttatattagccagtatgatttacatattggagaaatgactgtgagagaaaccttggaattctccgccagatgccagggagttggatcgagttatgagatgttggttgaactgtcaagaagagagaaagcagctaaaatcaagccagatcctgatattgatattttcatgaaggcattagcaacagagggacaagaagccgtttttgttacagattatgttctgaagcttttggggctggatatttgtgcagatactatggtgggagatgaaatgattaggggaatttcaggaggacaaaagaagcgtgtgacaaccggtgaaatgctcgttggaccgtccaaggcacttttcatggatgaaatctcaactggattggatagttctactacttactcaatagtgaactcactaagacaatctgtgcaaatcttgcacggaactgctgtgatatctctcttgcagccagcacccgagacgtacaacttgttcgacgacattattctgttatcagatgagaaaattgtctatcagggacctcgagaggatgtccttggcttctttgagtccatggggttcaaatgtccagacagaaaaggcgtggccgacttcttgcaagaagtgacttcaaagaaagatcaacagcaatattgggtgaggagggatgaaacttaccggtttatcacttcaaaagaatttgctgaggcacatcaatcgttccatgttgggaggaaactcgcggataagcttgcagcttcatatgacaagagcaaaagccatcctgctgctttgtcaactcaaaagtatggtatagggaagaaacaactcttaaaggtctgcactgaacgagaactcttactaatgaagaggaactcatttgtttacatcttcaagttcattcagcttacaattgtggcactcatatcaatgactctctttttccgtactaagatgccgcgtgatacaactgaagatggagtaaaatatgttggtgccctctttttggttgtcactcagattatgtttaacggaatggctgagatcgccctgacaatttacaaacttcctgtcttctacaagcaaagggaccttctcttttacccttcatgggcttatgcaatgcccacatggatactcaaaatgcctataacatttgctgaagttggactttgggtgttcctcacttactatgtcataggatttgatccgagtgctgcaagattattcaaacagtttttgctactcatattactaaaccagatggcgtcagcattgtttcgcttcattggggcagctggaaggaccatgggagttgctaatacatttggaacatttgttctgcttttacagtttgcattgggtggattcgttctttcacgagttgatgtgaagaaatggtggttatggggttactggtcatcaccgatgatgtatgctatgaattcaattcttgtgaatgaatttgatggaaaaaagtggaaacaaattgcaccaaatggaactgattcacttggagttacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="41928" stop="64476"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42228" g_stop="42612" g_length="385"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="385" r_length="385" r_score="0.995"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42613" i_stop="43133" i_length="521">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43134" g_stop="43254" g_length="121"/>
          <reference_exon_boundary r_type="cDNA" r_start="386" r_stop="506" r_length="121" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="43255" i_stop="43342" i_length="88">
            <donor d_prob="0.911" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="43343" g_stop="43516" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="507" r_stop="680" r_length="174" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="43517" i_stop="43658" i_length="142">
            <donor d_prob="0.950" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="43659" g_stop="43818" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="681" r_stop="840" r_length="160" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="43819" i_stop="44160" i_length="342">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="44161" g_stop="44237" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="841" r_stop="917" r_length="77" r_score="0.987"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="44238" i_stop="44298" i_length="61">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="44299" g_stop="44352" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="918" r_stop="971" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="44353" i_stop="44448" i_length="96">
            <donor d_prob="0.957" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="44449" g_stop="44841" g_length="393"/>
          <reference_exon_boundary r_type="cDNA" r_start="972" r_stop="1364" r_length="393" r_score="0.990"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="44842" i_stop="44923" i_length="82">
            <donor d_prob="0.964" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="44924" g_stop="45205" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="1365" r_stop="1646" r_length="282" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="45206" i_stop="45301" i_length="96">
            <donor d_prob="0.785" d_score="1.00"/>
            <acceptor a_prob="0.915" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="45302" g_stop="45618" g_length="317"/>
          <reference_exon_boundary r_type="cDNA" r_start="1647" r_stop="1963" r_length="317" r_score="0.991"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="45619" i_stop="45713" i_length="95">
            <donor d_prob="0.635" d_score="0.98"/>
            <acceptor a_prob="0.878" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="45714" g_stop="45878" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1964" r_stop="2124" r_length="161" r_score="0.891"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="45879" i_stop="64035" i_length="18157">
            <donor d_prob="0.882" d_score="0.86"/>
            <acceptor a_prob="0.889" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="64036" g_stop="64176" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="2125" r_stop="2265" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U328575" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>2269</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U328575" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42228" e_stop="42612"/>
          <exon e_start="43134" e_stop="43254"/>
          <exon e_start="43343" e_stop="43516"/>
          <exon e_start="43659" e_stop="43818"/>
          <exon e_start="44161" e_stop="44237"/>
          <exon e_start="44299" e_stop="44352"/>
          <exon e_start="44449" e_stop="44841"/>
          <exon e_start="44924" e_stop="45205"/>
          <exon e_start="45302" e_stop="45618"/>
          <exon e_start="45714" e_stop="45878"/>
          <exon e_start="64036" e_stop="64176"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTTCAAAATGGAGCTAACTAATTCAAGAGGTACTAGTTTAAGAGAAAAAATAATCAGGGGAAGTAGTTTGAGAGGGAGCTTAAGTAGAAAGAGGAATAGTACTAATAACTCCAGGTGGAATGGCAATGATGGGGAGATTTTTAATCGTTCAACGAGAGACGAAGATGATGAAGAGGCTCTTAAATGGGCAGCTCTTGAAAAGCTTCCAACGTTTGATCGTTTGAGAAAAGGTCTCTTGTTTGGATCACAAGGTGCATCTGCTGAAATTGATATACATGATATTGGTTTTCAAGAAAGAAACAAGTTGCTTGAAAGGCTTGTCAAAGTTGCAGATGAGGATAATGAGAAGCTCCTGTTGAAACTCAAGCAAAGAATTGACAGGTAAGTCGATGTATCTTCTGTCATCTTTGATGAACGAAAAATAACTATATAGGCCACACCATTTAACAGCAATGTTCGTTACAGATTCTGCATACATATGTTGTTAGAAGCTTGTGGTCTTAAATATGACTTCTGATCATATCATTTGTATGGCTACAGAAGTTTCTCACCAAAGCTAGTAGAATAAAAAGCTAAGTTTTGTGTTTCTTCTGTAATGAATTAATAAGGATATATTTTTATATAAACTAGAATGGAGCAAACAAAGTGGCACGAATAGTGACGATTTATGTAATCAAACTATCTTGCTTAAAAACTGAGACGTCGTAGTTGTTGTGCTGTTCTTCATCTAAGACTAATTTGTTTTTCATATTTAATTGAGACGGACTTAAATGGAACAACATGGACAATGATGATTCATATTGTCATTAATTACTCCGACTTGGTTAGAATTGAGGCATAGTTATTGTGATGTTGTTGATTATCTATGATAAGTTGTTTGACAATTCTTTTTCTTTTCACAGAGTTGGGATAGATTTGCCAGAAATAGAAGTAAGATATGAGCATTTAACTATTGAGGCAGATGCATATGTAGGAAGTAGAGCTTTGCCTACATTTATCAACTTTATCTCTAATTTTTTTGAGGTAAAAAGAAAATCTTGATTTCGAATCTTGAACAAAAAGGATGTTTGTAACTAACTTTTTTTTTTAAAAATTTTTTTGGGATTCATAGGATATATTGAACTCTGTCCATATCCTACCGAGTCGAAAGAGGAAACTAACTATTCTTAATGATGTGAGTGGTATCATTAAGCCTCGCAGATTGACTTTGCTTTTAGGACCTCCAAGTTCCGGGAAAACTACATTATTATTAGCTTTGGCCGGAAAGCTCGACTCTGCCCTTAAGGTATCACCATTAGTTCTATGTATCCAAGACTGACAGTTCAAGGATTAGCTAGCTGTCATTTTTGTCGTTCCGACAATTAATATATATTCTTCTTATTATAGACTGTCAATGCATAAAACTCATTTGTTTGTGTGGAAAACAGGTTACTGGAAAAGTGACGTATAATGGACATGAAATGAATGAGTTTGTGCCGCAAAGAACAGCGGCTTATATTAGCCAGTATGATTTACATATTGGAGAAATGACTGTGAGAGAAACCTTGGAATTCTCCGCCAGATGCCAGGGAGTTGGATCGAGTTATGGTTAGAATTTGTCTCCTTTTTCCTTAATCACTAAACCAGTAATGAGCTTTAACGAAAATAACTAATTGCCAACTAAAAATGTGCATGGTTTGTAAAAGTCCCTAAAAGCTTATAGCGGTATTGGATCCAATAACAATGAATCAATTAAGGCTTGTAAAGCCTTTAGCACTTTTTATTATATGCATATTTAATTTATTGCCACTAAAATTAAAGTTGTTTTTTTATTGTAGTGAATCTTGATCATACTTCAAACTTCTTGTTCTTTAAAAAAAGCATTTTGTGTTGAAATTTAACTAACGTGGATGATATATCGATTGATCTTTCTCGGAATTATTGTTGCAGAGCTGTTGGTTGAACTGTCAAGAAGAGAGAAAGCAGCTAAAATCAAGCCAGATCCTGATATTGATATTTTCATGAAGGTAAGCAACTAGAATATTTCCTTTCTCGAAAAGAAATGCTTATAGTTATTTTGGGATGTAGGCATTAGCAACAGAGGGACAAGAAGCAGTTTTTGTTACAGATTATGTTCTGAAGGTAACAGAAATATGTTTCACTAATTTCTCAAAATTTCCGACGATCAGAAGGCTGAGGAAAATTTGATAACTAAGTGATTTGTGTATTCCACTGCAGCTTTTGGGGCTGGATATTTGTGCAGATACTATGGTGGGAGATGAAATGATTAGGGGTATTTCAGGAGGACAAAAGAAGCGTGTGACAACCGGTGAAATGCTCGTTGGACCGTCCAAGGCACTTTTCATGGATGAAATCTCAACTGGATTGGATAGTTCTACTACTTACTCAATTGTGAACTCACTAAGACAATCTGTGCAAATCTTGCACGGAACTGCTGTGATATCTCTCTTGCAGCCAGCACCCGAGACGTACAACTTGTTCGACGACATTATTCTGTTATCAGATGAGAAAATTGTCTATCAGGGACCTCGAGAGGATGTCCTTGGCTTCTTCGAGTCCATGGGGTTCAAATGTCCAGATAGAAAAGGCGTGGCCGACTTCTTGCAAGAAGTATGTCTTATAATAAACAAATAAGAATGACAATCATTGATCTATTTTCCCTTCTGATGGTGGAAATTTAAATTCGTTGCAGGTGACTTCAAAGAAAGATCAACAGCAATATTGGGTGAGGAGGGATGAAACTTACCGGTTTATCACTTCAAAAGAATTTGCTGAGGCACATCAATCGTTCCATGTTGGGAGGAAACTCGCGGATAAGCTTGCAGCTTCATATGACAAGAGCAAAAGCCATCCTGCTGCTTTGTCAACTCAAAAGTATGGTATAGGGAAGAAACAACTCTTAAAGGTCTGCACTGAACGAGAACTCTTACTAATGAAGAGGAACTCATTTGTTTACATCTTCAAGTTCATTCAGGTGACAACTTGTCAATGAAAATATTAAATTTCAAGTCTCCGGCTCATCATATTTGTTCGCAAGTACTAATGCCTCATGGTTTTGATCTGTTCACAGCTTACAATTGTGGCACTCATATCAATGACTCTCTTTTTCCGTACTAAGATGCCGCGTGATACAATTGAAGATGGAGTAAAATATGTTGGTGCCCTCTTTTTGGTTGTCACTCAGATTATGTTTAACGGAATGGCTGAGATCGCCCTGACAATTTACAAACTTCCTGTCTTCTACAAGCAAAGGGACCTTCTCTTTTACCCTTCATGGGCTTATGCAGTGCCCACATGGATACTCAAAATGCCTATAACATTTGCTGAAGTTGGACTTTGGGTGTTCCTCACTTACTATGTCATAGGATTTGATCCGAGCGCTGCAAGGTAAGAGAAGAAATAGATGATGCAGTATAAAGATCAGGTTACCTTCAACAGCTTCCTTTTTCCCGTGATTACTTAACATCAGTCTATTATTGCAGATTTTTCAAACAGTTTTTGCTACTTCTATCACAAAACCAGATGGGCATCAGCATTGTTTCGCTTCATTGGGGCAGCGGGAAGGACCATGGGAAGTTGCTAATCCATTTGGAACCTTTGTTCTGCTTTTGCAGTTTGCATTGGGTGGGTTTCTTTCTCTTCCCAAGGTATTTTTGGTAGATTTTAGTGTTAAATCAACCTCTTAATCCTGCCAAACCATACCATCTCTTACCCAACAACGCGGTTTGTTGTTTATAGAGAGAACATCTGCGGCGATGAGCGGCGTTCCCCGGCCGAAAGGCCAGGTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGTGGAAAGGGATAAATGGGATAATGCAGTTTCTTTATTGTAGTTATGTGATGCCCAAGGCGGGTGGGGGTGTTTTATTCTGGTAATTCCCCTCCACCCTTACGATCCGGGGATTATTTTTTTTAATTTAGTGTATGTATAAATAATTTTGTGATGCTTTTGGTTACCATAAGTCGGGGGTGGCTTCGGGGGGTTTGTGGGGTTCCTTAAATTCATAATTCCCAAAGGAGTGCTAATTTTTTTTTTTTGGGAAACCCCTTGGATTGAAATTGTTGGTATCATTGGACAGGGGGCCGTTGCCTTCAGCTTTTGTTCAGGGTTTACACCCTATGGTTGGATGGCTTTAGGCATGTATACAAAAAAAACAATGAAATCACAAAGAACCCACCTTTTTAGGGATAGGAGAGTTTTTTACCATCATCATCTTGCTCAGTTCCTTTGTTATTAGCACTCAACCCACCGCTCTGATCCCCCATTTCCTCTTCAACTCTTCTGCTTTTGCCTTAGCAGCACAGGTCTTTACGAAACTTCTTCCCTTCCCGCTGGCTGCTGGTTTTTCAACACCTACAGGCATTAGCGTTCTTTACAAACAATGCAAGTAGAACAAAACCCAAAGTGACCATCATCAATACAAAATTGATCGTTTGAATTCTTCAACAAGTTTTCAACAGCGATCGAAACAAATAGAAAGATGAATGAGCAGTAAGATTAAAGAGGTCTTGATGCTAGGGTTTGTTGAAGAAACATCCAAAAGAAATATCAACAAAAGTGTAGGCGACTGTTGGGTTTTTGGGTGTATAATATGTTGATATTATTAGAGAGAGGCGTCTATTCATGCGTTTTTGGTTTTCGAAATTGTATTTGGAAATACTTTTTGCTACCTTAACTTTTGCAATTTTGAGTTTGGTGCCATATGACTAAACATATTTAGTTCTCTTAAAAATTATTAATCAAGTTTCTCAATATATTTTATTTATTTATTTTCTATTATTAATTATGTGATATTCATCAATTTTTGTGTATTCGAACTGATTCAATAAAATATTTGTATCTTATTGTTTCTCATATATCATGTAACTATAAAAATAAAAATATATAATATTTTAAAGTAATAGATGAACTCAGTTATATTATTTTGAGGCAATATGAATACAACTTTGTTATAGCATAACTGTAGTGAAATTTTGTGGTTTAATGACGTATTTCGGTTATAACAATAATATGTATCAACTATGATTTTATAAGTGATGTATGAGAGAAATTGTATTTTTATTTTGTTTATGTTAAGTTTATAAACAGATTGAGTTACGTGTATCAAAATCAAACTTGTAAAGTAATTATAATAGTGAAAAAATCATAGAAAAGAGAATAATAACAAGCAATAATAAATAATATGACAATGAAGCGAATAACACAATAAATAATACTAAGATCTAAAATAAGTTAGTATGAACGTAAAAATAAAGAAACTAGACGACATCTGATTAAATACTAACCCTTCAATTTCAGTATCTTCATATCTAATATCATGTCATCGTTAAATTACATATATCATATTCATCTAATCACATCTCTTCCCTACATTTTTTATTTGTTTCTACATGTACTTGTATTTGACCATAGTCAACCTCTTAATCTTCATATCTATATTAAAGTAAGGGCAGAAGCATGACAAGTTGTCAAGTGAAAGTTTAATATCAAGCCAGTTGGGAGTTTTAAATTAAACCTCTTCAAACCATAACTAAAAATTTAACTATTCAAAACATAAAAATAAATAAAACAATGATAATTTGACCCAAAAAGAAAATTACCAAATATTATACAATTCAAGATAATATTATTGGTAATTATTCATATATTTTTCATTGCTTATATATTATTTTATGCAAAAATAAGACGAGTTAAAATTGTTTGTGATTTTGAGCTTGACTTAATTCTATATCGATTTGAGTTGTGAAAGCAGGATATGTTAAATTATTATTATCATAATTTTGTAAAAACAAATTTTTTTCTTTGCATGTGAAAAGATGATACTGGGAGTGTTAATTCCGAAAAAAAAAACAGGATATGTTAAATTATTATTATCATAATTTTGTAAAAACAATTTTTTTTTCTTTGCATGTGAAAAGATGATACTGGGAGTGTTAATTCCGAGAAAAACGTTTGTATTGAATTCATGTGATTTGTCGCAAGGAAATTATTAAAGATGAATTGAAGAGAATATATATATGTATGTTGATAACTTACTCCCATTTGTTTCAGTATTGCTCCCTCATGTGGTATGAGCTCATTCTTGATGTTAAGTGTAAACTAGTTGGGTCTATTGTCTGTAACTTCACAAACCGACCTGATTGAATCAGACTCTTCAGTTGTTCTAACAAAGCATGGGTGTTTCTTGATCAAAGTCACCACATTTATGAGCACTATGAAATACAAGAATCAAAAAGAAAGATTTCTTCAAGGAATCAACAAGACAAGAACATGTGCTGTCATATTGAACTTCAGTTACAAATCAAACATTAGTTCTCATAATTTTGTGTGTCATCTCAACCTAATATATCACTCCCTTTGCAATAAGACACTTGTAGTTGTGCCTTAAACTCGAGCCAAGGCCTCTCTAATCTCCAAAGATCAGCTATCTGACAATTCTCCCCTAACTTCACCCAAGAAATAAGCCTGGATAACTCTTTTTTCTTCACTTTGGGACTCAATCCTTTTACACCAATCCATGCATCACGAAATGCTGGGAAGCACTTCTGCTTTGCAAATTCATGGCACTTCCCATTTGCTGCTTCAAGGCAAGCCTCCATTTCACGTTCTTCGCATCTCGCCCTCTCTGCAAAGTCTTGATTGGAAGCACTGCCAGTGAATGATTTCCACCAAGGAGTTTTACATTTGTCTGAGGCTGCGATAGAGCAACCAATCCTAGCTCCAGATTCACATTGTTGAGTGACTTGAGATTCACAAGCCTTGTATGCAGAGGCCCAGGAGATAGGGTCTTTAAATGCGAGGATGAATTGCCCAACTGTTTCTTCTTGTGGGCCAGCCTTGATGGGACCTCGAAGAAGAGGGACTGGTCGGTCAAAAGGAATCAGAGTCTTTGATGCAGAGTACTCCTCGAGGTCGATTGATGGCACTTCTGGTTGTGGTCGTCCTGGTGCTGTCATGATGCAGAGTACTCCCTGAGGTCGATTGATGGCACTTCTGGTTGCGGTCGTTCTGGTGCTGTCATATAGGCAGTTTTGTTTGTTCACAATTTTGGGTCCTGAAGAGACGAAACCAATATCAGGATACTCAAAGTAGTTTTCTCAAGGCTGAATTGATATCATCACCAGTAAATGCATCTGCAACAAGGACATTTGGATAAGGAACTTTTCAAACTTTTGGTATTCTGTATAGATTGTTGGGTATGTTTTTGATAAAATGTAAGGAAAACAATTGTACATAAATCATTTAAGATAAAGAAGTTGTTTTTGAGAAACAGAATTTTTTGCTACTGGTACTCCATCAACGTTTTTGGATTGTCTTCCAATAACAAGTTTGGTTTTTGAAATAGACATGAGAGTTGTTTTGGAAAAAACTTCATTGGAAAACATCCCAAATTCAAACACCACAAAGTGTCTATATCACGAGTATCTAGAAGTTCTCCCAACACAAGGGGCTCATACTTCATGGAATCATGCCAAGTGACATAAACTGCAGGGGACTGAATAAACTGATAATATGTATATGCCCGCGGGAAGAAGGGGCTGGGTACAATATAAAAAATTGTACCCCCCTAAGTATCGCTGTCTCCTTTCGATAAGGTTGGAACGATACTTTAAGGGATACATAAAATTCATGATATACGATAAGTGTTACATTTCATAAGATCAATAAATAAAAACAATAAGCATTAAAAGCATTTTCATGTAATCTTTAAATCATTTCAGAATGTTATATCATTTCTATGCATAGAGGTATGTATTACTGTTGAGCGCTTCACTCAGAGGACTTCAGTTTAGAAACAAACAGAAGCAAAACAACCAGATCAACATTCAGTGAGGCAGGGAAAGATGATGAAGAGTGGTATATGTAGCTAAAAGGAAAAGCAGCTGTGTTGGCAGTACGAGTCAAGGAGATGCAGTTAGGGAAGAAGATCAAAACCATAGCCACCTTAAGTTTTGTTGGCTAAATCAACTGAATGAAGCTTTTAACATGGTGTAATATTGTCCGCTTTGGCCAAATCCACATGGTTTTTTTTCAAAAGGCCTCACACACCTCATATGTAGCTTTCCAGTCTTTTTAAGCTACCACTTTGTTTGCACGCCCAACAAAATTGTTGCCGAATTCCCATCGCTGATATCTTCATCAGGGGATCTCAGAAATCCCTTTCCAAGTTTAATTTTTGTATATAAATGACATGGACAACTCACATAATTCTTATTGACCAGTTATTCGAACTAGGGACTTACTTGGGATCCAGGTTGAGTACGGAAGCACGTGACAAAGGTTTTGGGATTTTCATCTTCTTTCTAATCTAATTTCTTTATCCTTGTATCCTTCCAATCAATAAATAATAGTAATGCTTATATTCCTTATTTCAGTTTATTAGAGTAATAATACAATCAATGAATCTTGTTTACTGTGAATTGGAATAGTGTTTGCTTCATTTCCTTTAAAGATCTCAATCGAGAAACATGTAAACTTGCACATAGAGTGAACAATCAAACAGATATATTTTACCAAAAGAACACTATCCAAACAGAACATTCCATTCCAATTAAGTTTAAAAATAAAAAGTTGAAGAATATATTTTTTAAAAAATGAACGAACAAACCATAAACATACCTACAAATTGATAGAGAGAAAGAGTTGGCAGCCATGGGAGACGAAATACTCGAGCTTCCGACTTTTTCTTACTTTGTTCATCTAACACTAGAAGAGGATTGGGCCCCCGATTCTTTTGCTTTAACATGGGCCTCAAAAACTCTTTTAGTAAATAACCAAAACAATTATGAACCTTTTACAACTGAAAATCACATGTGTAAACTTGTAATATTTTGTTGGTAAAAACTAAATAGTATCAAAATGAGAAAATGTTAGGCTATGCTATAACTATTCAAATTTCAGACTCCAATCTAATAGTTTATCGTGGATTATGAATAAACATTATATTTGAGTTTAATGTAATTTCTTAAAAAGCTATATTTAGCACGTTTTTTTTTTCAAGTATGGAAAAAAAATATAATAATATCCTAAAAAGGTATATTTGTATATCGGCCTATTTTTAGAAATATAATAACCAGGGCAATAGTTATATTTACATAGTCTACATTCGTTTTGCAATAATATTTATATAACTTTATGCATGTTAAAACAAGTACTTTAAATAACATGTGATAGCAAAATTAATTACTGTCACATTATAATTAAGTAAATTAAATGCACTTTCTTCCGTGTGATCGGACACTTTAAAATAATGTAGTAGCATGAATGTAAGTTGAGAACATAATATGTCTACATTTATTAAGTCAAGCTTGACTAAAAACATTTCACAAGTAATGTCAATCAATATTTGATTATACCAAATATTACTACTCTTCTTTTAAGCCATGTTTTATTATGAATTTTTGGCATATATTTTTTTTTCTCAATCCACACGAATGAAATAAATAAATATTTATTTTAAAATTATTTTTTTCATTAAATGACTTATTTTCCTTTTTTATTGGCTTAAAAAAGGATAATTTATTATTTTTATAGCAATACTTTAATTTCAGTTTGTAGTATGATTGATACAGTAACTTTAATTTAGAATTATAAATTTTTTTAAAAAAATATGGGCTTTTTAATGTAACTGAGTCCATATTTCAATTGGCTTTTGAAATTGTCCAATAATTCCGCCAGTCCCGCCTTTTTCTCCCACTTTTTACTAATTTCAAATATTTTCGCTAAGCCCAAAAAAACAAGAGATTATAAAAGCCAAATACAGCTCTCCTGTTTTTTTGCTCTCTCTTATATTCCCTCATCCTCCCGCCACTGTACACACTGCACGTTCGCCGCCGCCGCTGCGACCTACTACTTCATCTTTTCAGATATCCCAATGCCAAGCAAACGGAAATCTTCTCCGGCTACAAAGCCAGAGTCTTCATCCGGCAGTAGGAAGTCGAAGAGACTTGTAGTTGAAAGACCAGATCCAGTAGTAGCTCAACCATCTGATTCCGATTTTGAACCGGAACCTGTTTTATCATCAAAGAAGAAATCCACGAGACGAACAACAGCTGAAAGTTCAGTGGTAGCTTGTCAATCGGAAAGCAATAACAAGAAGTTGAAGAAGCCAACTGTTGAAAAGGCAGAATCTGGTGTAGCTTCACCAGCTGATAGAGATTTCGTATCTGAGTCTGATTCGGAGACGCCGAGCAAGAAATCCACGAGGCGAGCTGCAGTAAAGGTGGAACCTTTGGTGGATTCTGTAGCTGGGAGTGATTTTGTGGAAGAGGAAGAAGTAGATGGAATGGAGCTAGGGAGTCTGAAGAAGAGCTTGTCGATTTCACCTTCCAAAAGGAAGCCTAAGAGGGCTGAGAAAGTTAAAGATGAAGAGTGTGTACTTGCCGGTGACCCTGTTCCGGATGCAGAAGCTAGACTGAAGTGGCCTCATCGCTATGTAAGAAAGATTCTTACTTTGAGATTTTAAATATTCTTTACTTTGAAATATTTGCAATTTAGTTGCAAAAACGTTTAATATAATTTTAAATGGCATGAAATTATGCTTTCTATATGGTATATCTGATATTCTGCTGCCAAACTTGATGCTATCTGAAATAAGAAGCATAATTTAAGGGACTGTTGTTGATAGTCTATCAATCCGTTTTTATTTGGCATCATTTGTCTTTATTCAATATTTTACTTACATGGCTATTTCTTTTTGTAAACAGAATAAAGGGAAAGAAAATGGTACCAAGAGCTTAAATGGGTAAGTCTTGAACCACTTTCCACTCCAACATCATTTTTGTTATATATAAATTAGTTCAAGGATTTATGTGTTTTTGGTACTTTCATGTTACAGTCAAGATGATCCGGACCAGTTAATTCAAGCTAAGTGCCATTTTAGTCGAGCAGATGTTGATGGTCAGATATATTATCTCGAGGATGATGCACATGTGAAGGTAAAGTGTAAATTAACCATAAACTTACATTATTCAGGTCCTTTCATTGTGTTGATATACTCTTTACAATAGGTTTGATAGGAATGTGGGTACTTTTTATGTAGTCTTAATTATTAACTTAATGTTAAATTGTATCTGGGCCTTATTTGTGGCAAGTGGAGCTTTTTACAGATAATGGGTGGAGATGATACTTGGGGATCTAGTATGTTTGCTTACTGTTAAGGAATGAATATAGTCATATTCCTTGTAATATATGTGGACAACTTAATTCTAGGGGTTCATAGCAAATCTGTAGGACTTTCCTTTTAATTACTTCCATAGTTAGAAAGATCTATATGTATATAATCGTGTCACTTCATGTAATTTTATGTCAGCTTTTCTTCTTATTTGATATATACATGGTATTAGAGCCAGATTTATCCTCCTTGGATTTGTGGTTCATACTCTAGTTGGACCTTTGTGTAAATAGGTGTTAGCGTCACCTTGGTTGGTGAATTGCTTATACAGACTTGTGCAATTCTCCCTCTTGAGCTAGTTTTTGGGTTTGTGTTAGCATGGATGCCCTATCTTTACATCTACTTTGATATGTGTTTTCTTAGATAGCATTAAAAAAAATTCTGTTTCAATTTGTTTGATTGGTTTTGACATGACACAAAGTTAATGTAAGTAAATAAATACTTTTTAATGTTGTGGTTTTAAATTTAAGATATGTATAAAGTACTTAAAAGTCCTTTAGTATTGGGTTTGAACATCCCAGGATTAAAGTTAAAATTAAAAGAGTTGCCGTTGTTTGTGTTGACATTGGACTCTCAACTTACCATGAAACTGCTTGTATAGATTTGGTAGTTTTCTCCCTATGACTTGGCTTTTGGGGTTATTTAAACACAAGGTTCACACCTTTTATGGTATCAGAGCTAGATCTGTCACTGTTTAGGTACCTATGGTGATGTTGTCCACAATCTAATTGGTGGTCTTGGTGAGTTTAGGTGTGTGGTGGTTGTGGAGGTTTTAGAGTTCGTTAGAGTCCTACACTTATTGGGGAATGGATTGATGGTCTCCTAGTTTATATTTGAGCTATACTCCCTCATGAGCTAGTTTTGGTTTGAGTTAGGCCCAAGGTTCATATTTTACAGTTGGTTGAAATTTTTCTCCATTTATCATAGCCCAATTACTGTAAGTTGAGGTTTGTTATTTTACTTATGGCCATAAAATGTATCCATGTATTGACTAATTTTTATTATCTATCATGTAACTAGGCTGCTGATGGTGAGGACGATTACATTTGCAAGATTGTTGAATTCTTTGAAGCAGTTGACGGAGTGCAGTATTTTACAGCTCAGTGGTTTTACAGAGCTAAGGATACTGTAAGAAATACCAACTCTATAATCTGAAAGGTTCTTGCCCCCTGTGATGCTATCATGGTCTCACATCTCTTTTTCCCTGCTAGGTTATTAAAAGCCATGATCAGTTCATTGACAAAAAACGTGTATTCCTTTCTGAAATCAAGGATGACAATCCTCTTGATTGCCTTGTGACCAAACTAAAGATTGTTCCTGTGCCCTCAAATGTATGTCTTTGTTACCTTGCTGGTGAGTACTGTGAATTGGTATTGAGTGGTTGAACTAAAAATGCAGAATATTGCTGCAGGCAACTTCACAGTTCAAGGAAAATGTAAAATCAAATTGTGATTTCTACTATGACATGAAGTACTTGCTTCCATACTCTTCCTTCATTAGCTTGCCTCCTGGTATTTATTTTTTGTCGACTCTTTTCAATTATTGTCCAACAGTGTTGGTCCTTTTGTGTTAGTATTCAAGCTTAAACATGCCTAATTGAGAGGTCAATTCTTTTTAGATACTACAAGTCCAGTTAGTTCATCTTCTACTATATCAAGTGACATTGATGCTGGTGAGGTCAAAGAACACAATCTGGAAAAGAAGCTCTTGGATCTATATTCAGGATGTGGAGCAATGTCCACAGGGTTATGCTTGGGTGCCAATAGCAAAGGCGTTAAACTTGTTACTGTATGTTCTTTCCTTCAACTTATTCTATGTTTTGCCAATTTGAACCAGCAGAATATGACTTACTTTCTTGATATTTGATAAGACCTTTAGTCCTGTTAATACAAAATCTTGGATGCAGAAATGGGCTGTTGACCTTAACAAACATGCATGTGACAGTTTGAGATTGAACCACCCTGAGACTCAGGTGAGGAATGAGTATGCCAGTGATTTCCTATCACTTCTGAAGGAGTGGGTACAGCTCTGTGTCTCTTGTTCCTTGATAAAAGGCAGTGTTCCTCCACACCCTCATTTGAAAGTAACAGATGAAGTTGATGAAGATGAAGAAAATGATGATGAAGGTGAAGATTCTGGTGATGATAAAGAAGGTGAAATTTTTGAGGTCGAAGAACTCCTAGAAGTTTGTTATGGAGATCCAAAAGAGAATAACAAACCTGGACTTTACTTCAAGGTACTTGACCATTGAGCTTGGAATTCTTTAATTCTTTGGTAGAACACAGATTTATTATGTGGAAAAGCTGAAGTCATTTTATGTTTTTTTTTTCTGTGTGTTTCTGGCACTTGTCATTTTCTGAAATCACTTTGATTACTTTGTGCCTAGGTTCGCTGGAGAGGTTATGGTCCAGAGGAAGACACCTGGGAGCCAATAGATGGCTTAAGGTATACACATGAAACAATTTATTCTGAAATTTTTATGTTTATTTGTTTAAAAACATTGGTTCTAACTAGTTGACATTTGTATAGTGACTGCCCGAAGAAAATCAGTGAGTTTGTGGTGAAAGGCTTCAAAGCAAATCTTTTGCCGTTGCCTGTAAGTAAATCCCTCTTTCAGTCCTACTGGCTTTGGGGTTAAAAGATCTGAACCACTTCTAGGTTATCAACTTGCTAACGATTTGTAATGCTGACCATACTGATTGAATTTTCTGTTGGTTATTTTCTAGGGTGATGTTGATGTTGTATGCGGTGGACCACCTTGCCAAGGAATCAGTGGGTTCAATCGTTTTAGGAATAAAGAAAATCCGATGCAGGATCCCAAAAATAAACAACTTGATGTCTACATGGACATTGTGGATTTCTTGAAACCCAGGTTTGTATTAATGGAGAATGTGGTGGACCTTGTCAAATTCTCCAATGGTTTCCTTGGGCGATATGCATTGAGCAGACTTGTAGGGATGAACTACCAAGCACGGATGGGAATGATGGCAGCTGGTGCGTATGGTCTTCCACAATTTCGTATGCGTGTTTTCATGTTTGGAGCTCTTTCATCAAAGGTAATAATGATTTTGATTTTTAAGTTAATATTTTTCCAAAATTGAATTCAATGCACCTATCCATCATCCTCACTCCGCATAAATCTTGTCATGTTTGAAAAGTTGCCCCAATATTCATTGCCCACCCCCAAAAGTATTGGGAGGGGTGATATTTCCCTAAATTTAAAGTAGGCCTTTTGATTTTTTTAAAATAACAGGGAATCCTGATCAATCGAAAATTGACTAAATGATCACTCTGCTGCACAAGCAATCAAACAACTATGCGTATGAATCGGCAAGAGTTCCTGGATACACGAAAAACTCCTCCTAGGAAAAGCACGAACATAACCACCAAATGAAGACTCACAAATAATAACGTTTTTTGACGACCCCCCCCCACCCCAAAATAAGAAAGAGGAAACTCTTCCATACGCATCGCACACTTACCCAGCTCAAAAATACACACCGGCAAAAAAAATAAACAACACCACTGATACCCGCGCCACTCCATACCCCGCCGACCTCAAAAAAAGANGCACAGTATCCTACCAATACACCAATAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGACTGCGTCCATGATTGCCAGGTGGCAGGATGTTGGTTTCACACATGGAGTCATGAACACTGATAATATGAGCGTGTTAGGACTCACTATTGACTATGGTCCCTTTGGCTTTTTAGATTCTTTTGATCCCAGTTACACACCAAATACCACTGATCTTCCTGGCAGAAGATATTGTTTTGCAAATCAGCCAGATGTAGGTTTATGGAATATTGCGCAGTTTACCTCTGCTCTATCTACTGCCGAGTTGCTTAGTGATAAAGAGGCAGATTATGCTATGGAAAGGTATCTTTAGATACTAGCATTTGGCCATTTGCTCAAATGTTATGTCTCTGTGATTGCTCGATTATTTCTCTTTTGCTGTTGTTGATGTTTATCTGTTGACTTTTTTTAGATATGGTAACAAATTCATGGATGATTATCAAGATATCATGACCAGGAAACTTGGTCTGACAAAGTACAATAAAAAGTTGATTGGTGAACTACTCAAGAATATGGTCTCCGATAAAGTTGATTACACAAATTTCTTTCGATCTCTATCAAACATCAAAGCTGATCCTGCAATTCCAGAGGACCAATTATTGATTCCTCTCAAAGATGTTCTCTTAGATATTGGTATGGAACGCAGGGAAGCCTGGACTAACTGGATAAAGTCATATATACAAGAGGTATGTGACAATGAATTTCCTTATTCAAATAATACAATGCCGCCGCCTCAATCCCAGGGGTCGGCTATATTAATCCTCACTGTCTATGTCTGGTCCATTTATGCTCATTTCAGTCCAATATTATTCAATTTTCCCAAATAGAATGAAGCATATAATGTGTTTAGAATTAGTTTAGCTACTTGAGCTCAACATTGCAGTGAGTAGGGTAATATAAGGTCGGGTAACATAAGGTCCTTTGAAATCGGACTTTGTCCTGGAACCACCCGTATTTGAATAGTTATTCACTTCAATAATAAGTTGTTATGGTTTTGTTCTTTAAACTGTTGTCAAATGTTCTTTTAGGATAGCTGGTTGCTCACCTTGTTTGTTCCTTAGATACCAGTAATGGTAGGTGGTAATGGATAGCAGTTTCCATCCATGGGAAGATGTTCAATTTCATTCCTCCTCTGCCTTGTTCTTCAAGGTTTCCATCTTTCCAGTCTCTTCTACCCTGGGCCCAAAAAAGCAAGAAGAAAGTCATAAAGGAAATAACAGATAGTAGACGTAAGCAATGGGTGAGAAGTAGTTGTGACAACGTTTTTGTATGGCATTGAGTGTGACTCTTATATTCTCATCAATTGAAATGGCTTGTCATGTTAGCTTCCTGCTTCTTCCTCTTTTATGTCTAACACCTTGTGCTCAGATTGTGCTGTGGAAGAGACATCCTTCTACAAGAGGTGTCAGATGACTTGTATGTAGGTAATAGTGTGGTCACCCATTAGGTGGGAGAGGGAGGAAGCTTGCCCCATATCCTTTTTCTCCTTATTAGTAGTAATATTTAGTAATCACATAGTTTCTTATTCTTCATGTGTGTCTACTATTTGTTGCTTCGTTTTGCTTTATATCTTGATATTTGTTGTCATTTTTTTCTGCTTGCAACACTTCCATGAATAACTTCCCTTTTAAGCCGAGGATCTATCGGAAACCTCTCCACCCCACAGAGGTAGGGTAAGGTCTGCATACATCTCACTCTCTCCAGACCCCACTTGTGGGATTACATTGAGTATGTTGTGTTGTATGTAAGTAGTGTTTTTTCTTGAAAAAGAAAGTATCGATATATAAGGCTGATACAACTTGAAAAGCAATGTCAGAGTAAACAACAATTTGAAGCAAAGCCTTGTAACTTACGCAACTTAGACGGTAACTCATTTGCAAATTGAGTTGTTGAATTGTGGTAATAGACAGACAATGCTTGCGTAAAATCCTGCATACACCATTGTTTTATGCGGTTGTTTTTGTGGACTCTTTTCTGGAAATTATCAAGTTCCATTCTTGTATGTGAGGTACTCATGGTGTCACTTTTCTACCTCTTGCAGCTCTCCACAACTGGTGTATTAGATGAGGAGAGGAAAGTTTCAATGAATTTTGTAAATCCAAAGTACATCCTCAGAAACTATCTATGCCAGAATGCCATTGATGCAGCAGAACAAGGCGATTTTGAGGAGGTTCGGCAGTTATTGAAGGTTATGCAATGTCCATTTGATGAACAGCCTGGTATGGAGAAATATGCACGCTTGCCTCCAGCTTGGGCTCATCGTCCGGGTGTATGCATGCTTTCTTGTTCCTCATAAGGTTTCCGGGTGTATGCTTATGCTTTCTTGTTCCTCATAATATCTCCACTATGTAATACCAGAGTTTCACTTGTATATATATAACTAGTCTCCCGGCACGTGCGTTGCACGTGTATTCCAAATAAAAATCAATAAAAAAAATAAATGAAAAAGTATATAATAAACTATTAGGAGAATTATGATGTTTTTTTCGAGTGTTCTCTCAATATTTTCAATCTACTGCACATTAGATAAGTCTCCAAAACTTACCCATTTATAAGCAATTAAATATAGTCAACAAGTAAAATTTTCAAGAAAGACACATCAAGCTAAAGAATTAAAAAGGGAAAATGCGTCGTTACTTAAAGTCATCTTGTATCCCTAATGTGTGTCGTTACAAATGTAACTACTTCCTTAAAAACTTTCAGATGTACCCAGACTTACATTTATAGGCTTACAATATCCATCACTGTTAGAGAAGACTTGGAGTTACTACATTTGTTGAAGAAAATGTGATATATTTTGCTAGCAAACAACTGCAATTTCAATTTATTATTATTAGTTTAAAAGTTTAAACATGGTTTCTTTTCTGTGGGAAGCTATGTGTAGGGAGTTTCAAAGAGAGTTGATCATCATTCAGCATCAAACCACATGTGTACAATAATATTCAATTTTTGATATGTGTGATTATACCTTTCAAACTATTTACTTTACCTATTAAAAAAATTAGAAAGTTATCATTCAAATGAAGTTGGCAAATCAAACGGAAAAATCTAAGACTTAATAAGATTGTACCTGAAAATTAGAAGACATTTTTGTACCCAATGGAAGCTTGTGTTGAATGACTAATATTGAGTATGTTTATATAGTGTAGTCTTGAAGATTTGTTGATAAAAACTCTTTGATATTCCTCAATTACTTAATTTGATCCCTTTCAACTTCTCATAATTAGCAAAATACGTTTCAACTTCTATATTAATTGAAACTTTATTAGTGTTCATCCTATTTGGTTGTTTCACACATAATAGTTGAATAGACTGTTGAACTTCTCATTTTGCTCCTCTATTATGTAATTCAATATTATTATTTAATTAGATATTTAATTTATATTTGGGTAAAGTATTTTATTACTTTTTAATTTAGTATAGGGGCAAAGTAGTAATTCAACTTTACACTTTAGAGCTTCATGCTTATAATAATATATGATATGATAATAGAAATCAGTTCTTCGTTCTTGCAGTTATGTGTAAAAAGTACGTTACAGATTGTATTGTAAGTGACAGAGTGGCCTTCGAGCCACAATATAGGAAGAAGATTCAGTTGGTTTCGCTGCAAAAGAGAGAACTCTTGGTATCATTTTCAAACATTAATTTGTATTTGGAGAAATACTTTTTTCGCAGGTTCTTTGCCTCTTTGGAGCTCATTTTTTACCCAAGTCTTTATGCAACATTTAATACATATGTATAAACGTAAAATTTGATCTATGTTAAGATATGCCCGTGCAATTATTCAGTGAATGGTGTTAACTGACCACTTCTGTAAGTAATAACTTTGCCCTTGTGTTCAAGAGAATCCAAACAACTATTGCAGGTTTAACATCTGGCTATCAACTTGTTTCACAATCCTCTGGCATATGCTGCAGGAGTAAACAAACACACCTGTCACCTATGCCTACAACGTGTTGAATCCCACATCATTCACTTGGCCTTCAACTTTCTTACATGAATCTTCCCATCACGAGCTAGCTTGTGGTGTGCTAGCCTACTGGTTTCACAATGAAAAAGATTTCCAAGTCTATCCAACAGTTTATACAAGTCTAATTGCTAGTTTTCTATATTTGACAGCAACCGGACCTGATCTCATGCCCGCATTAAGTCCTCTGTCGAGGTTTATGCATGCGATAAGTCAAAGTTCATCTTGGTGTAGCTAAACGGGCCTTGAAGGGAACTGTTGATTATGGATTTTGGTTTTAGAAAGAAGAGCAATGGCAATTGATGGGTTGTGATTGGGCAGGAAGTGTTGATGATACGATAAGGAGTTGTTGATATGCTTTTTTACACTTGGTTCAGGCATATTCTCATGAAATTCAAAAAATCAAGAGGTAGTAGTTCAATCTTCTGCAGAAGCAGAATACTATACATCACCCTGCTGTTGGTGCAACTAATCAGGTTCTACAGTTAAAGAAGGATTCTAAGTTTTCCTCTGAGGTTCCAAATACTAACATGTTGAAGTAATATTTGACCTATAAAGGCAGTACAATTAATTATTCAGAGATCACGAATATCCAAATAATCAGTTCATTGCAGAGTAATGTGATACAAAACAAACAGATCATATATATACATCTTCAAGTGGTAACCTGAATACATTAGTTCTATAAGCATTTCTTGAATTTTCCTCATGAAGATGTTCAGCAGGTAAGCTCTTCTATCTTTTCTGGAAGTTGAAAACCTTAATAGCCAAAGCAAATGTGAAGGCAAAAACAAGAGTATATGCAACAGTCACCACTGCAGCTACTCCAACAAAATCATGCTTGAACCCAAAGTAACGCCTCAAGAATTGTTTGGCTGTCTCATCACTATCAGTAATTTTGTTTTGGAGGTCTCCGAATTGTGATGCAACCAAACCATACAATGTCCAGGCAACAGGATCAGCCCAATAGTACCATCTCCACCATATGGGCATGCTCTATTTTTCAAAGAAAAAACATGTCATCATTTTCATGTGAAGAAGGTACAAAATGCAAATGTTTCAAGAACTTACAGGTCGTGGAACAATGAATCCTGAGAAAAGATTCCACATTCCATATCCGGAGACAGAGACAATTTGCGCGACATGTTGATTTGGGGTAATGGCAACACTCATCATTCCATAGAAGGTGAAGTACAAGAGAGTGAAGAACATTATAAACAAGTACCAAAAGAACTTGGTCACAGTCCATTCAAATCCAATCATAGCATAGACGATAACACCATAAGAAACAGCTTGCACAAAGACATATGGTATTTCAATGAAAGTCTGCAGATTAGAGTTATTTAGACTTTTTAAACCGGAGATAGGCTTGTAAGAAGTTAAATCATATGCTTACTTGTCCAAAGGCGTAAGGGATGGCAGAATACATTCCAGCAGCTCTTTCTCTGTAATATACTGTACGCTCAACGGCTACAACAGGCAACACTGATGATGCATTTTGAAAACCAAGGAAGAAAACAGGAGTATACAATGATCCCAAAGCGTTAAACAGGTCTTGTTTCTTACCCCTATAACACAAAGAAATATGCTTTTAGCATGAAGTATTTTCCAGAGTACTTGGTTTTGTCATATGTTTGGGGACTTACACTTTAGTACCAAGATCCCAGAACATTGTCCCAATGGCCAAGGCAATGAAGATTGTACAGATATATCTGACTGCAGTATAAGCAGGATTACGCCAGTATGACCAGTGTTGCTTCCAAAGGCAAGCCATACATTGGATCCAAAATGGTTGTGAGTATTGATTGTTGAAATGCAGGTCTTTTGTACCAGGGCAAGGCATGCTAAGTTCACTAATCAATGTTTTATTCCTCCTGTAAAGGTCTGATTTCTTGTATAAATCAGTGAAATCAAGCCCCAGCATCGTTTCCTGAGCCAAATTTGTGACTTCTAACATCCAAGTTGCTGGATTGTAGCCATCGTGTATTTTACTTACCCCAGGAATTGACTGAATACAAGAAGAATTATTTTGTTATTCGATCGTATTAACTTGAAAAAGGGGAGGCTCGTTTATCTACTTAGACAACTTACCTCAAAGTATCTGATTAAATGGCAAGAATGGTGACCCAATGGACCAACATATATCTCGTTTCCTCCTCGTTTCATTAGAAATAGCTGCAAAGAGTGGTATTTATATTAGTATTCAATGTCAAAAAAGAAAGATGACATTTATTAGATTCACCTCATCAAATGCTTCAAAAATGTCGATACTAGGCTGATGGATGGTACAAACAACGGTTCTTCCTGTGTCAACTGTGTTCCTAACAGTTCTCATAACAATTGCAGCAGCTCTTGCATCCAACCCCGAAGTTGGTTCATCCATGAAAATGATAGAGGGGTTTGCCACTAGTTCCACTGCAATGGTCAACCTTTTGCGTTGCTCAGTTGAGAGACCGTTGACTCCTGGCAGACCAACCAACGCTGACCTTAATGGTGTAAGCTCCACAAGTTCCATAACTTCATCAACAAACATCTACACAAGGATATAATATAAGAAATGTCATATGATTTCCACATTAACTGCATTTAACTTATATTCAAAAGGAACAAAACCTTTCTGGTCTTTTCATCAACATCAAAAGGTAAACGCCACCCAAACTAAATAAACAAAAGAATTCAAAAACTGTAACAAAAAGGGGAAAGGGATATCAATTCCGTTCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAGAAGCTTTAATCTTGCAAAAACCAACTACTGCTAACAGACTACTGCTGATGTTGTAGTTGATGTGAAGAAATGGTGGTTATGGGGTTACTGGTCATCACCGATGATGTATGCTATGAATTCAATTCTTGTGAATGAATTTGATGGAAAAAAGTGGAAACAAATTGCACCAAATGGAACTGATTCACTTGGAGTTACAG</genome_strand>
        <mrna_strand>TTTGGTTCAAAATGGAGCTAACTAATTCAAGAGGTACTAGTTTAAGAGAAAAAATAATCAGGGGAAGTAGTTTGAGAGGGAGCTTAAGTAGAAAGAGGAATAGTACTAACAACTCCAGGTGGAATGGCAATGATGGGGAGATTTTTAATCGTTCAACGAGAGACGAAGATGATGAAGAGGCTCTTAAATGGGCAGCTCTTGAAAAACTTCCAACGTTTGATCGTTTGAGAAAAGGTCTCTTGTTTGGATCACAAGGTGCATCTGCTGAAATTGATATACATGATATTGGTTTTCAAGAAAGAAACAAGTTGCTTGAAAGGCTTGTCAAAGTTGCAGATGAGGATAATGAGAAGCTCCTGTTGAAACTCAAGCAAAGAATTGACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGTTGGGATAGATTTGCCTGAAATAGAAGTAAGATATGAGCATTTAACTATTGAGGCAGATGCATATGTAGGAAGTAGAGCTTTGCCTACATTTATCAACTTTATCTCTAATTTTTTTGAG........................................................................................GATATATTGAACTCTGTCCATATCCTACCGAGTCGAAAGAGGAAACTAACTATTCTTAATGATGTGAGTGGTATCATTAAGCCTCGCAGATTGACTTTGCTTTTAGGACCTCCAAGTTCCGGGAAAACTACATTATTATTAGCTTTGGCCGGAAAGCTCGACTCTGCCCTTAAG..............................................................................................................................................GTTACTGGAAAAGTGACCTATAATGGACATGAAATGAATGAGTTTGTGCCGCAAAGAACAGCTGCTTATATTAGCCAGTATGATTTACATATTGGAGAAATGACTGTGAGAGAAACCTTGGAATTCTCCGCCAGATGCCAGGGAGTTGGATCGAGTTATG......................................................................................................................................................................................................................................................................................................................................................AGATGTTGGTTGAACTGTCAAGAAGAGAGAAAGCAGCTAAAATCAAGCCAGATCCTGATATTGATATTTTCATGAAG.............................................................GCATTAGCAACAGAGGGACAAGAAGCCGTTTTTGTTACAGATTATGTTCTGAAG................................................................................................CTTTTGGGGCTGGATATTTGTGCAGATACTATGGTGGGAGATGAAATGATTAGGGGAATTTCAGGAGGACAAAAGAAGCGTGTGACAACCGGTGAAATGCTCGTTGGACCGTCCAAGGCACTTTTCATGGATGAAATCTCAACTGGATTGGATAGTTCTACTACTTACTCAATAGTGAACTCACTAAGACAATCTGTGCAAATCTTGCACGGAACTGCTGTGATATCTCTCTTGCAGCCAGCACCCGAGACGTACAACTTGTTCGACGACATTATTCTGTTATCAGATGAGAAAATTGTCTATCAGGGACCTCGAGAGGATGTCCTTGGCTTCTTTGAGTCCATGGGGTTCAAATGTCCAGACAGAAAAGGCGTGGCCGACTTCTTGCAAGAA..................................................................................GTGACTTCAAAGAAAGATCAACAGCAATATTGGGTGAGGAGGGATGAAACTTACCGGTTTATCACTTCAAAAGAATTTGCTGAGGCACATCAATCGTTCCATGTTGGGAGGAAACTCGCGGATAAGCTTGCAGCTTCATATGACAAGAGCAAAAGCCATCCTGCTGCTTTGTCAACTCAAAAGTATGGTATAGGGAAGAAACAACTCTTAAAGGTCTGCACTGAACGAGAACTCTTACTAATGAAGAGGAACTCATTTGTTTACATCTTCAAGTTCATTCAG................................................................................................CTTACAATTGTGGCACTCATATCAATGACTCTCTTTTTCCGTACTAAGATGCCGCGTGATACAACTGAAGATGGAGTAAAATATGTTGGTGCCCTCTTTTTGGTTGTCACTCAGATTATGTTTAACGGAATGGCTGAGATCGCCCTGACAATTTACAAACTTCCTGTCTTCTACAAGCAAAGGGACCTTCTCTTTTACCCTTCATGGGCTTATGCAATGCCCACATGGATACTCAAAATGCCTATAACATTTGCTGAAGTTGGACTTTGGGTGTTCCTCACTTACTATGTCATAGGATTTGATCCGAGTGCTGCAAG...............................................................................................ATTATTCAAACAGTTTTTGCTACTCATATTACTAAACCAGAT-GGCGTCAGCATTGTTTCGCTTCATTGGGGCAGCTGGAAGGACCATGGG-AGTTGCTAATACATTTGGAACATTTGTTCTGCTTTTACAGTTTGCATTGGGT-GGATTCGTTCT-TTCACGAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGTGAAGAAATGGTGGTTATGGGGTTACTGGTCATCACCGATGATGTATGCTATGAATTCAATTCTTGTGAATGAATTTGATGGAAAAAAGTGGAAACAAATTGCACCAAATGGAACTGATTCACTTGGAGTTACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U331986" ref_strand="+" ref_description="SGN-U331986        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr3:23422141-23422943 REVERSE | Aliases: MAA21.20(evalue: 2e-18, score=88.2) genbank/nr: putative(evalue: 1e-16, score=88.2)">
      <seq>aactctttctctctatcaatttgtagatgcatttactggtgatgatatcaattcagccttgagaaaactactttgagtatcctgatattggtttcgtctcttcaggacccaaaattgtgaacaaacaaaactgcctatatgacagcaccagaacgaccgcaaccagaagtgccatcaatcgacctcagggagtactctgcatcatgacagcaccaggacgaccacaaccagaagtgccatcaatcgacctcgaggagtactctgcatcaaagactctgattccttttgaccgaccagtccctcttcttcgaggtcccatcaaggctggcccacaagaagaaacagttgggcaattcatcctcgcatttaaagaccctatctcctgggcctctgcatacaaggcttgtgaatctcaagtcactcaacaatgtgaatctggagctaggattggttgctctatcgcagcctcagacaaatgtaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="-" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="51277" stop="48709"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50977" g_stop="50952" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50951" i_stop="49466" i_length="1486">
            <donor d_prob="0.988" d_score="0.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="49465" g_stop="49009" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="483" r_length="457" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="-" ref_id="SGN-U331986" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>483</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331986" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50977" e_stop="50952"/>
          <exon e_start="49465" e_stop="49009"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACTCTTTCTCTCTATCAATTTGTAGGTATGTTTATGGTTTGTTCGTTCATTTTTTAAAAAATATATTCTTCAACTTTTTATTTTTAAACTTAATTGGAATGGAATGTTCTGTTTGGATAGTGTTCTTTTGGTAAAATATATCTGTTTGATTGTTCACTCTATGTGCAAGTTTACATGTTTCTCGATTGAGATCTTTAAAGGAAATGAAGCAAACACTATTCCAATTCACAGTAAACAAGATTCATTGATTGTATTATTACTCTAATAAACTGAAATAAGGAATATAAGCATTACTATTATTTATTGATTGGAAGGATACAAGGATAAAGAAATTAGATTAGAAAGAAGATGAAAATCCCAAAACCTTTGTCACGTGCTTCCGTACTCAACCTGGATCCCAAGTAAGTCCCTAGTTCGAATAACTGGTCAATAAGAATTATGTGAGTTGTCCATGTCATTTATATACAAAAATTAAACTTGGAAAGGGATTTCTGAGATCCCCTGATGAAGATATCAGCGATGGGAATTCGGCAACAATTTTGTTGGGCGTGCAAACAAAGTGGTAGCTTAAAAAGACTGGAAAGCTACATATGAGGTGTGTGAGGCCTTTTGAAAAAAAACCATGTGGATTTGGCCAAAGCGGACAATATTACACCATGTTAAAAGCTTCATTCAGTTGATTTAGCCAACAAAACTTAAGGTGGCTATGGTTTTGATCTTCTTCCCTAACTGCATCTCCTTGACTCGTACTGCCAACACAGCTGCTTTTCCTTTTAGCTACATATACCACTCTTCATCATCTTTCCCTGCCTCACTGAATGTTGATCTGGTTGTTTTGCTTCTGTTTGTTTCTAAACTGAAGTCCTCTGAGTGAAGCGCTCAACAGTAATACATACCTCTATGCATAGAAATGATATAACATTCTGAAATGATTTAAAGATTACATGAAAATGCTTTTAATGCTTATTGTTTTTATTTATTGATCTTATGAAATGTAACACTTATCGTATATCATGAATTTTATGTATCCCTTAAAGTATCGTTCCAACCTTATCGAAAGGAGACAGCGATACTTAGGGGGGTACAATTTTTTATATTGTACCCAGCCCCTTCTTCCCGCGGGCATATACATATTATCAGTTTATTCAGTCCCCTGCAGTTTATGTCACTTGGCATGATTCCATGAAGTATGAGCCCCTTGTGTTGGGAGAACTTCTAGATACTCGTGATATAGACACTTTGTGGTGTTTGAATTTGGGATGTTTTCCAATGAAGTTTTTTCCAAAACAACTCTCATGTCTATTTCAAAAACCAAACTTGTTATTGGAAGACAATCCAAAAACGTTGATGGAGTACCAGTAGCAAAAAATTCTGTTTCTCAAAAACAACTTCTTTATCTTAAATGATTTATGTACAATTGTTTTCCTTACATTTTATCAAAAACATACCCAACAATCTATACAGAATACCAAAAGTTTGAAAAGTTCCTTATCCAAATGTCCTTGTTGCAGATGCATTTACTGGTGATGATATCAATTCAGCCTTGAGAAAACTACTTTGAGTATCCTGATATTGGTTTCGTCTCTTCAGGACCCAAAATTGTGAACAAACAAAACTGCCTATATGACAGCACCAGAACGACCGCAACCAGAAGTGCCATCAATCGACCTCAGGGAGTACTCTGCATCATGACAGCACCAGGACGACCACAACCAGAAGTGCCATCAATCGACCTCGAGGAGTACTCTGCATCAAAGACTCTGATTCCTTTTGACCGACCAGTCCCTCTTCTTCGAGGTCCCATCAAGGCTGGCCCACAAGAAGAAACAGTTGGGCAATTCATCCTCGCATTTAAAGACCCTATCTCCTGGGCCTCTGCATACAAGGCTTGTGAATCTCAAGTCACTCAACAATGTGAATCTGGAGCTAGGATTGGTTGCTCTATCGCAGCCTCAGACAAATGTAAAA</genome_strand>
        <mrna_strand>AACTCTTTCTCTCTATCAATTTGTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGCATTTACTGGTGATGATATCAATTCAGCCTTGAGAAAACTACTTTGAGTATCCTGATATTGGTTTCGTCTCTTCAGGACCCAAAATTGTGAACAAACAAAACTGCCTATATGACAGCACCAGAACGACCGCAACCAGAAGTGCCATCAATCGACCTCAGGGAGTACTCTGCATCATGACAGCACCAGGACGACCACAACCAGAAGTGCCATCAATCGACCTCGAGGAGTACTCTGCATCAAAGACTCTGATTCCTTTTGACCGACCAGTCCCTCTTCTTCGAGGTCCCATCAAGGCTGGCCCACAAGAAGAAACAGTTGGGCAATTCATCCTCGCATTTAAAGACCCTATCTCCTGGGCCTCTGCATACAAGGCTTGTGAATCTCAAGTCACTCAACAATGTGAATCTGGAGCTAGGATTGGTTGCTCTATCGCAGCCTCAGACAAATGTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U330311" ref_strand="+" ref_description="SGN-U330311        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | chromomethylase 3 (CMT3), nearly identical to chromomethylase CMT3 (Arabidopsis thaliana) GI:14583092, GI:14647157 | chr1:26251990-26257248 REVERSE | Aliases: T6C23.3, T6C23_3(evalue: 3e-32, score=135) genbank/nr: gi|27529842|dbj|BAC53936.1| chromomethylase-like protein [Nicotiana tabacum](evalue: 2e-46, score=189)">
      <seq>ctgcacgttcgccgccgccgctgcgacctactacttcatcttttcagatatcccaatgccaagcaaacggaaatcttctccggctacaaagccagagtcttcatccggcagcaggaagtcgaagagacttgtagttgaaagaccagatccagtagtagctcaaccatctgattccgattttgaaccggaacctgttttatcatcaaagaagaaatccacgagacgaacaacagctgaaagttcagtggtagcttgtcaatcggaaagcaataacaagaagttgaagaagccaactgttgaaaaggcagaatctggtgtagcttcaccagctgatagagatttcgtatctgagtctgattcggagacgccgagcaagaaatccacgaggcgagctgcagtaaaggtggaacctttggtggattctgtagctgggagtgattttgtggaagaggaagaagtagatggaatggagctagggagtctgaagaagagcttgtcgatttcaccttccaaaaggaagcctaagagggctgagaaagttaaagatgaagagtgtgtacttgccggtgaccctgttccggatgcagaagctagactgaagtggcctcatcgctataataaagggaaagaaaatggtaccaagagcttaaatggtcaagatgatccggaccagttaattcaagctaagtgccattttagtcgagcagatgttgatggtcagatatattatctcgaggatgatgcacatgtgaaggctgctgatggtgaggacgattacatttgcaagattgttgaattctttgaagcagttgacggagtgcagtattttacagctcagtggttttacagagctaaggatactgttattaaaagccatgatcagttcattgacaaaaaacgtgtattcctttctgaaatcaaggatgacaatcctcttgattgccttgtgaccaaactaaagattgttcctgtgcccctcaatgcaacttcacagttcaagggaaaatgtaaaatcaaattgtgatttctactatgacatgaagtacttgcttccatactcttccttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="51852" stop="55300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52152" g_stop="52767" g_length="616"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="616" r_length="616" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52768" i_stop="53038" i_length="271">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53039" g_stop="53076" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="617" r_stop="654" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53077" i_stop="53169" i_length="93">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="53170" g_stop="53269" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="655" r_stop="754" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="53270" i_stop="54525" i_length="1256">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="54526" g_stop="54633" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="755" r_stop="862" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="54634" i_stop="54716" i_length="83">
            <donor d_prob="0.793" d_score="1.00"/>
            <acceptor a_prob="0.487" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="54717" g_stop="54836" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="863" r_stop="982" r_length="120" r_score="0.975"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="54837" i_stop="54916" i_length="80">
            <donor d_prob="0.706" d_score="0.94"/>
            <acceptor a_prob="0.820" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54917" g_stop="55000" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="983" r_stop="1067" r_length="85" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U330311" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1066</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U330311" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52152" e_stop="52767"/>
          <exon e_start="53039" e_stop="53076"/>
          <exon e_start="53170" e_stop="53269"/>
          <exon e_start="54526" e_stop="54633"/>
          <exon e_start="54717" e_stop="54836"/>
          <exon e_start="54917" e_stop="55000"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGCACGTTCGCCGCCGCCGCTGCGACCTACTACTTCATCTTTTCAGATATCCCAATGCCAAGCAAACGGAAATCTTCTCCGGCTACAAAGCCAGAGTCTTCATCCGGCAGTAGGAAGTCGAAGAGACTTGTAGTTGAAAGACCAGATCCAGTAGTAGCTCAACCATCTGATTCCGATTTTGAACCGGAACCTGTTTTATCATCAAAGAAGAAATCCACGAGACGAACAACAGCTGAAAGTTCAGTGGTAGCTTGTCAATCGGAAAGCAATAACAAGAAGTTGAAGAAGCCAACTGTTGAAAAGGCAGAATCTGGTGTAGCTTCACCAGCTGATAGAGATTTCGTATCTGAGTCTGATTCGGAGACGCCGAGCAAGAAATCCACGAGGCGAGCTGCAGTAAAGGTGGAACCTTTGGTGGATTCTGTAGCTGGGAGTGATTTTGTGGAAGAGGAAGAAGTAGATGGAATGGAGCTAGGGAGTCTGAAGAAGAGCTTGTCGATTTCACCTTCCAAAAGGAAGCCTAAGAGGGCTGAGAAAGTTAAAGATGAAGAGTGTGTACTTGCCGGTGACCCTGTTCCGGATGCAGAAGCTAGACTGAAGTGGCCTCATCGCTATGTAAGAAAGATTCTTACTTTGAGATTTTAAATATTCTTTACTTTGAAATATTTGCAATTTAGTTGCAAAAACGTTTAATATAATTTTAAATGGCATGAAATTATGCTTTCTATATGGTATATCTGATATTCTGCTGCCAAACTTGATGCTATCTGAAATAAGAAGCATAATTTAAGGGACTGTTGTTGATAGTCTATCAATCCGTTTTTATTTGGCATCATTTGTCTTTATTCAATATTTTACTTACATGGCTATTTCTTTTTGTAAACAGAATAAAGGGAAAGAAAATGGTACCAAGAGCTTAAATGGGTAAGTCTTGAACCACTTTCCACTCCAACATCATTTTTGTTATATATAAATTAGTTCAAGGATTTATGTGTTTTTGGTACTTTCATGTTACAGTCAAGATGATCCGGACCAGTTAATTCAAGCTAAGTGCCATTTTAGTCGAGCAGATGTTGATGGTCAGATATATTATCTCGAGGATGATGCACATGTGAAGGTAAAGTGTAAATTAACCATAAACTTACATTATTCAGGTCCTTTCATTGTGTTGATATACTCTTTACAATAGGTTTGATAGGAATGTGGGTACTTTTTATGTAGTCTTAATTATTAACTTAATGTTAAATTGTATCTGGGCCTTATTTGTGGCAAGTGGAGCTTTTTACAGATAATGGGTGGAGATGATACTTGGGGATCTAGTATGTTTGCTTACTGTTAAGGAATGAATATAGTCATATTCCTTGTAATATATGTGGACAACTTAATTCTAGGGGTTCATAGCAAATCTGTAGGACTTTCCTTTTAATTACTTCCATAGTTAGAAAGATCTATATGTATATAATCGTGTCACTTCATGTAATTTTATGTCAGCTTTTCTTCTTATTTGATATATACATGGTATTAGAGCCAGATTTATCCTCCTTGGATTTGTGGTTCATACTCTAGTTGGACCTTTGTGTAAATAGGTGTTAGCGTCACCTTGGTTGGTGAATTGCTTATACAGACTTGTGCAATTCTCCCTCTTGAGCTAGTTTTTGGGTTTGTGTTAGCATGGATGCCCTATCTTTACATCTACTTTGATATGTGTTTTCTTAGATAGCATTAAAAAAAATTCTGTTTCAATTTGTTTGATTGGTTTTGACATGACACAAAGTTAATGTAAGTAAATAAATACTTTTTAATGTTGTGGTTTTAAATTTAAGATATGTATAAAGTACTTAAAAGTCCTTTAGTATTGGGTTTGAACATCCCAGGATTAAAGTTAAAATTAAAAGAGTTGCCGTTGTTTGTGTTGACATTGGACTCTCAACTTACCATGAAACTGCTTGTATAGATTTGGTAGTTTTCTCCCTATGACTTGGCTTTTGGGGTTATTTAAACACAAGGTTCACACCTTTTATGGTATCAGAGCTAGATCTGTCACTGTTTAGGTACCTATGGTGATGTTGTCCACAATCTAATTGGTGGTCTTGGTGAGTTTAGGTGTGTGGTGGTTGTGGAGGTTTTAGAGTTCGTTAGAGTCCTACACTTATTGGGGAATGGATTGATGGTCTCCTAGTTTATATTTGAGCTATACTCCCTCATGAGCTAGTTTTGGTTTGAGTTAGGCCCAAGGTTCATATTTTACAGTTGGTTGAAATTTTTCTCCATTTATCATAGCCCAATTACTGTAAGTTGAGGTTTGTTATTTTACTTATGGCCATAAAATGTATCCATGTATTGACTAATTTTTATTATCTATCATGTAACTAGGCTGCTGATGGTGAGGACGATTACATTTGCAAGATTGTTGAATTCTTTGAAGCAGTTGACGGAGTGCAGTATTTTACAGCTCAGTGGTTTTACAGAGCTAAGGATACTGTAAGAAATACCAACTCTATAATCTGAAAGGTTCTTGCCCCCTGTGATGCTATCATGGTCTCACATCTCTTTTTCCCTGCTAGGTTATTAAAAGCCATGATCAGTTCATTGACAAAAAACGTGTATTCCTTTCTGAAATCAAGGATGACAATCCTCTTGATTGCCTTGTGACCAAACTAAAGATTGTTCCTGTGCCCTCAAATGTATGTCTTTGTTACCTTGCTGGTGAGTACTGTGAATTGGTATTGAGTGGTTGAACTAAAAATGCAGAATATTGCTGCAGGCAACTTCACAGTTCAA-GGAAAATGTAAAATCAAATTGTGATTTCTACTATGACATGAAGTACTTGCTTCCATACTCTTCCTTC</genome_strand>
        <mrna_strand>CTGCACGTTCGCCGCCGCCGCTGCGACCTACTACTTCATCTTTTCAGATATCCCAATGCCAAGCAAACGGAAATCTTCTCCGGCTACAAAGCCAGAGTCTTCATCCGGCAGCAGGAAGTCGAAGAGACTTGTAGTTGAAAGACCAGATCCAGTAGTAGCTCAACCATCTGATTCCGATTTTGAACCGGAACCTGTTTTATCATCAAAGAAGAAATCCACGAGACGAACAACAGCTGAAAGTTCAGTGGTAGCTTGTCAATCGGAAAGCAATAACAAGAAGTTGAAGAAGCCAACTGTTGAAAAGGCAGAATCTGGTGTAGCTTCACCAGCTGATAGAGATTTCGTATCTGAGTCTGATTCGGAGACGCCGAGCAAGAAATCCACGAGGCGAGCTGCAGTAAAGGTGGAACCTTTGGTGGATTCTGTAGCTGGGAGTGATTTTGTGGAAGAGGAAGAAGTAGATGGAATGGAGCTAGGGAGTCTGAAGAAGAGCTTGTCGATTTCACCTTCCAAAAGGAAGCCTAAGAGGGCTGAGAAAGTTAAAGATGAAGAGTGTGTACTTGCCGGTGACCCTGTTCCGGATGCAGAAGCTAGACTGAAGTGGCCTCATCGCTAT...............................................................................................................................................................................................................................................................................AATAAAGGGAAAGAAAATGGTACCAAGAGCTTAAATGG.............................................................................................TCAAGATGATCCGGACCAGTTAATTCAAGCTAAGTGCCATTTTAGTCGAGCAGATGTTGATGGTCAGATATATTATCTCGAGGATGATGCACATGTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTGCTGATGGTGAGGACGATTACATTTGCAAGATTGTTGAATTCTTTGAAGCAGTTGACGGAGTGCAGTATTTTACAGCTCAGTGGTTTTACAGAGCTAAGGATACT...................................................................................GTTATTAAAAGCCATGATCAGTTCATTGACAAAAAACGTGTATTCCTTTCTGAAATCAAGGATGACAATCCTCTTGATTGCCTTGTGACCAAACTAAAGATTGTTCCTGTGCCCCTCAAT................................................................................GCAACTTCACAGTTCAAGGGAAAATGTAAAATCAAATTGTGATTTCTACTATGACATGAAGTACTTGCTTCCATACTCTTCCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U332056" ref_strand="+" ref_description="SGN-U332056        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam profile PF02696: Uncharacterized ACR, YdiU/UPF0061 family | chr5:4133219-4136921 FORWARD | Aliases: T19L5.1, AT5G13040(evalue: 6e-79, score=289) genbank/nr: gi|54290901|dbj|BAD61584.1| putative selenoprotein O [Oryza sativa (japonica cultivar-group)] (evalue: 5e-79, score=295)">
      <seq>ccatttggagaatatgactaggagtgaaagcatatcagctaacacagacgtggatttaacttcaaacaagtatgcagcttgggcagtggaagttgctgagaggactgcgtccatgattgccaggtggcaggatgttggtttcacacatggagtcatgaacactgataatatgagcgtgttaggactcactattgactatggtccctttggctttttagattcttttgatcccagttacacaccaaataccactgatcttcctggcagaagatattgttttgcaaatcagccagatgtaggtttatggaatattgcgcagtttacctctgctctatctactgccgagttgcttagtgataaagaggcagattatgctatggaaagatatggtaacaaattcatggatgattatcaagatatcatgaccaggaaacttggtctgacaaagtacaataaaaagttgattggtgaactactcaagaatatggtctccgataaagttgattacacaaatttctttcgatctctatcnaaatnaaagctgatcctgcaattccag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="56906" stop="58074"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57106" g_stop="57489" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="384" r_length="384" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57490" i_stop="57598" i_length="109">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="57599" g_stop="57774" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="385" r_stop="559" r_length="175" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U332056" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57106" e_stop="57489"/>
          <exon e_start="57599" e_stop="57774"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGACTGCGTCCATGATTGCCAGGTGGCAGGATGTTGGTTTCACACATGGAGTCATGAACACTGATAATATGAGCGTGTTAGGACTCACTATTGACTATGGTCCCTTTGGCTTTTTAGATTCTTTTGATCCCAGTTACACACCAAATACCACTGATCTTCCTGGCAGAAGATATTGTTTTGCAAATCAGCCAGATGTAGGTTTATGGAATATTGCGCAGTTTACCTCTGCTCTATCTACTGCCGAGTTGCTTAGTGATAAAGAGGCAGATTATGCTATGGAAAGGTATCTTTAGATACTAGCATTTGGCCATTTGCTCAAATGTTATGTCTCTGTGATTGCTCGATTATTTCTCTTTTGCTGTTGTTGATGTTTATCTGTTGACTTTTTTTAGATATGGTAACAAATTCATGGATGATTATCAAGATATCATGACCAGGAAACTTGGTCTGACAAAGTACAATAAAAAGTTGATTGGTGAACTACTCAAGAATATGGTCTCCGATAAAGTTGATTACACAAATTTCTTTCGATCTCTATCAAACATCAAAGCTGATCCTGCAATTCCAG</genome_strand>
        <mrna_strand>CCATTTGGAGAATATGACTAGGAGTGAAAGCATATCAGCTAACACAGACGTGGATTTAACTTCAAACAAGTATGCAGCTTGGGCAGTGGAAGTTGCTGAGAGGACTGCGTCCATGATTGCCAGGTGGCAGGATGTTGGTTTCACACATGGAGTCATGAACACTGATAATATGAGCGTGTTAGGACTCACTATTGACTATGGTCCCTTTGGCTTTTTAGATTCTTTTGATCCCAGTTACACACCAAATACCACTGATCTTCCTGGCAGAAGATATTGTTTTGCAAATCAGCCAGATGTAGGTTTATGGAATATTGCGCAGTTTACCTCTGCTCTATCTACTGCCGAGTTGCTTAGTGATAAAGAGGCAGATTATGCTATGGAAAG.............................................................................................................ATATGGTAACAAATTCATGGATGATTATCAAGATATCATGACCAGGAAACTTGGTCTGACAAAGTACAATAAAAAGTTGATTGGTGAACTACTCAAGAATATGGTCTCCGATAAAGTTGATTACACAAATTTCTTTCGATCTCTATCNAA-ATNAAAGCTGATCCTGCAATTCCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U344301" ref_strand="-" ref_description="SGN-U344301        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam profile PF02696: Uncharacterized ACR, YdiU/UPF0061 family | chr5:4133219-4136921 FORWARD | Aliases: T19L5.1, AT5G13040(evalue: 1e-78, score=289) genbank/nr: gi|54290901|dbj|BAD61584.1| putative selenoprotein O [Oryza sativa (japonica cultivar-group)] (evalue: 6e-83, score=310)">
      <seq>gataaagttgattacacaaatttctttcgatctctatcaaacatcaaagctgatcctgcaattccagaggaccaattattgattcctctcaaagatgttctcttagatattggtatggaacgcagggaagcctggactaactggataaagtcatatatacaagagctctccacaactggtgtattagatgaggagaggaaagtttcaatgaattttgtaaatccaaagtacatcctcagaaactatctatgccagaatgccattgatgcagcagaacaaggcgattttgaggaggttcggcagttattgaaggttatgcaatgtccatttgatgaacagcctggtatggagaaatatgcacgcttgcctccagcttgggctcatcgtccgggtgtatgcatgctttcttgttcctcataaggtttccgggtgtatgcttatgctttcttgttcctcataatatctccactatgtaataccagagtttcacttgtatatatataactagtctcccggcacgtgcgttgcacgtgtattccaaataaaaatcagtaaaaaaaataaatgaaaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="57408" stop="59936"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57708" g_stop="57872" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="165" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="57873" i_stop="59227" i_length="1355">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59228" g_stop="59636" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="574" r_length="409" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U344301" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344301" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="57708" e_stop="57872"/>
          <exon e_start="59228" e_stop="59636"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAAAGTTGATTACACAAATTTCTTTCGATCTCTATCAAACATCAAAGCTGATCCTGCAATTCCAGAGGACCAATTATTGATTCCTCTCAAAGATGTTCTCTTAGATATTGGTATGGAACGCAGGGAAGCCTGGACTAACTGGATAAAGTCATATATACAAGAGGTATGTGACAATGAATTTCCTTATTCAAATAATACAATGCCGCCGCCTCAATCCCAGGGGTCGGCTATATTAATCCTCACTGTCTATGTCTGGTCCATTTATGCTCATTTCAGTCCAATATTATTCAATTTTCCCAAATAGAATGAAGCATATAATGTGTTTAGAATTAGTTTAGCTACTTGAGCTCAACATTGCAGTGAGTAGGGTAATATAAGGTCGGGTAACATAAGGTCCTTTGAAATCGGACTTTGTCCTGGAACCACCCGTATTTGAATAGTTATTCACTTCAATAATAAGTTGTTATGGTTTTGTTCTTTAAACTGTTGTCAAATGTTCTTTTAGGATAGCTGGTTGCTCACCTTGTTTGTTCCTTAGATACCAGTAATGGTAGGTGGTAATGGATAGCAGTTTCCATCCATGGGAAGATGTTCAATTTCATTCCTCCTCTGCCTTGTTCTTCAAGGTTTCCATCTTTCCAGTCTCTTCTACCCTGGGCCCAAAAAAGCAAGAAGAAAGTCATAAAGGAAATAACAGATAGTAGACGTAAGCAATGGGTGAGAAGTAGTTGTGACAACGTTTTTGTATGGCATTGAGTGTGACTCTTATATTCTCATCAATTGAAATGGCTTGTCATGTTAGCTTCCTGCTTCTTCCTCTTTTATGTCTAACACCTTGTGCTCAGATTGTGCTGTGGAAGAGACATCCTTCTACAAGAGGTGTCAGATGACTTGTATGTAGGTAATAGTGTGGTCACCCATTAGGTGGGAGAGGGAGGAAGCTTGCCCCATATCCTTTTTCTCCTTATTAGTAGTAATATTTAGTAATCACATAGTTTCTTATTCTTCATGTGTGTCTACTATTTGTTGCTTCGTTTTGCTTTATATCTTGATATTTGTTGTCATTTTTTTCTGCTTGCAACACTTCCATGAATAACTTCCCTTTTAAGCCGAGGATCTATCGGAAACCTCTCCACCCCACAGAGGTAGGGTAAGGTCTGCATACATCTCACTCTCTCCAGACCCCACTTGTGGGATTACATTGAGTATGTTGTGTTGTATGTAAGTAGTGTTTTTTCTTGAAAAAGAAAGTATCGATATATAAGGCTGATACAACTTGAAAAGCAATGTCAGAGTAAACAACAATTTGAAGCAAAGCCTTGTAACTTACGCAACTTAGACGGTAACTCATTTGCAAATTGAGTTGTTGAATTGTGGTAATAGACAGACAATGCTTGCGTAAAATCCTGCATACACCATTGTTTTATGCGGTTGTTTTTGTGGACTCTTTTCTGGAAATTATCAAGTTCCATTCTTGTATGTGAGGTACTCATGGTGTCACTTTTCTACCTCTTGCAGCTCTCCACAACTGGTGTATTAGATGAGGAGAGGAAAGTTTCAATGAATTTTGTAAATCCAAAGTACATCCTCAGAAACTATCTATGCCAGAATGCCATTGATGCAGCAGAACAAGGCGATTTTGAGGAGGTTCGGCAGTTATTGAAGGTTATGCAATGTCCATTTGATGAACAGCCTGGTATGGAGAAATATGCACGCTTGCCTCCAGCTTGGGCTCATCGTCCGGGTGTATGCATGCTTTCTTGTTCCTCATAAGGTTTCCGGGTGTATGCTTATGCTTTCTTGTTCCTCATAATATCTCCACTATGTAATACCAGAGTTTCACTTGTATATATATAACTAGTCTCCCGGCACGTGCGTTGCACGTGTATTCCAAATAAAAATCAATAAAAAAAATAAATGAAAAAGT</genome_strand>
        <mrna_strand>GATAAAGTTGATTACACAAATTTCTTTCGATCTCTATCAAACATCAAAGCTGATCCTGCAATTCCAGAGGACCAATTATTGATTCCTCTCAAAGATGTTCTCTTAGATATTGGTATGGAACGCAGGGAAGCCTGGACTAACTGGATAAAGTCATATATACAAGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTCCACAACTGGTGTATTAGATGAGGAGAGGAAAGTTTCAATGAATTTTGTAAATCCAAAGTACATCCTCAGAAACTATCTATGCCAGAATGCCATTGATGCAGCAGAACAAGGCGATTTTGAGGAGGTTCGGCAGTTATTGAAGGTTATGCAATGTCCATTTGATGAACAGCCTGGTATGGAGAAATATGCACGCTTGCCTCCAGCTTGGGCTCATCGTCCGGGTGTATGCATGCTTTCTTGTTCCTCATAAGGTTTCCGGGTGTATGCTTATGCTTTCTTGTTCCTCATAATATCTCCACTATGTAATACCAGAGTTTCACTTGTATATATATAACTAGTCTCCCGGCACGTGCGTTGCACGTGTATTCCAAATAAAAATCAGTAAAAAAAATAAATGAAAAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U324763" ref_strand="+" ref_description="SGN-U324763        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT1G15520.1 | Symbol: PDR12 | ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots. | chr1:5331988-5338170 REVERSE | Aliases: T16N11.3, T16N11_3, PDR12, PLEIOTROPIC DRUG RESISTANCE 12 (evalue: 2e-71, score=265) genbank/nr: gi|41052472|dbj|BAD07483.1| PDR-type ABC transporter 1 [Nicotiana tabacum](evalue: 2e-80, score=301)">
      <seq>agcgtacagtattttacagagaaagagctgctggaatgtattcttccctcccctatgcctttggacaaactttcattgaaataccatatgtctttgtgcaagctgttacctatgctgttatcatctatgctatgatcggatttgaatggacagtgagcaagttcttttggtacttgtttatcatgtatttcactttcttgtacttcaccttctatggtatgatgagcgttgccgtttccccaaatcaaaatattgcgcaaattgtctctctcttcggctattcaatgtggaatcttttctcaggattcatgattccgcgacctagtatgcccatatggtggagatggtactattgggctgatcctgttgcctggacattgtatggtttggttgtatcgcaattcggagacctccaagataaaattactgatatagatgagacatccaaacaattcttgaggcgttactttgggttcaagcatgattttcttggagtagttgcagctgtgactgttgcatatgctgttgtttttgccttcacatttggtttggccattaagtttttcaacttccagaaaagatagaagagcttacctgctgaagatggaacattcaagaaatgcttataaaaataatgtattcaggttaccacttgaacaagtatatatatgttctgtttgttttgtatcgcactactatgcagtgaaatgattttgtaagtttgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="-" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="62917" stop="61439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="62617" g_stop="62550" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="62549" i_stop="62480" i_length="70">
            <donor d_prob="0.999" d_score="0.92"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="62479" g_stop="62225" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="323" r_length="255" r_score="0.898"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="62224" i_stop="62150" i_length="75">
            <donor d_prob="0.991" d_score="0.86"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62149" g_stop="61752" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="713" r_length="390" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="725" polyA_stop="739"/>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="-" ref_id="SGN-U324763" ref_strand="+">
        <total_alignment_score>0.906</total_alignment_score>
        <cumulative_length_of_scored_exons>721</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="62617" e_stop="62550"/>
          <exon e_start="62479" e_stop="62225"/>
          <exon e_start="62149" e_stop="61752"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCGTACAGTATATTACAGAGAAAGAGCTGCTGGAATGTATTCTGCCATCCCTTACGCCTTTGGACAAGTAAGCATATGATTTAACTTCTTACAAGCCTATCTCCGGTTTAAAAAGTCTAAATAACTCTAATCTGCAGACTTTCATTGAAATACCATATGTCTTTGTGCAAGCTGTTTCTTATGGTGTTATCGTCTATGCTATGATTGGATTTGAATGGACTGTGACCAAGTTCTTTTGGTACTTGTTTATAATGTTCTTCACTCTCTTGTACTTCACCTTCTATGGAATGATGAGTGTTGCCATTACCCCAAATCAACATGTCGCGCAAATTGTCTCTGTCTCCGGATATGGAATGTGGAATCTTTTCTCAGGATTCATTGTTCCACGACCTGTAAGTTCTTGAAACATTTGCATTTTGTACCTTCTTCACATGAAAATGATGACATGTTTTTTCTTTGAAAAATAGAGCATGCCCATATGGTGGAGATGGTACTATTGGGCTGATCCTGTTGCCTGGACATTGTATGGTTTGGTTGCATCACAATTCGGAGACCTCCAAAACAAAATTACTGATAGTGATGAGACAGCCAAACAATTCTTGAGGCGTTACTTTGGGTTCAAGCATGATTTTGTTGGAGTAGCTGCAGTGGTGACTGTTGCATATACTCTTGTTTTTGCCTTCACATTTGCTTTGGCTATTAAGGTTTTCAACTTCCAGAAAAGATAGAAGAGCTTACCTGCTGAACATCTTCATGAGGAAAATTCAAGAAATGCTTATAGAACTAATGTATTCAGGTTACCACTTGAAGATGTATATATATGATCTGTTTGTTTTGTATCACATTACTCTGCAATGAACTGATT</genome_strand>
        <mrna_strand>AGCGTACAGTATTTTACAGAGAAAGAGCTGCTGGAATGTATTCTTCCCTCCCCTATGCCTTTGGACAA......................................................................ACTTTCATTGAAATACCATATGTCTTTGTGCAAGCTGTTACCTATGCTGTTATCATCTATGCTATGATCGGATTTGAATGGACAGTGAGCAAGTTCTTTTGGTACTTGTTTATCATGTATTTCACTTTCTTGTACTTCACCTTCTATGGTATGATGAGCGTTGCCGTTTCCCCAAATCAAAATATTGCGCAAATTGTCTCTCTCTTCGGCTATTCAATGTGGAATCTTTTCTCAGGATTCATGATTCCGCGACCT...........................................................................AGTATGCCCATATGGTGGAGATGGTACTATTGGGCTGATCCTGTTGCCTGGACATTGTATGGTTTGGTTGTATCGCAATTCGGAGACCTCCAAGATAAAATTACTGATATAGATGAGACATCCAAACAATTCTTGAGGCGTTACTTTGGGTTCAAGCATGATTTTCTTGGAGTAGTTGCAGCTGTGACTGTTGCATATGCTGTTGTTTTTGCCTTCACATTTGGTTTGGCCATTAAGTTTTTCAACTTCCAGAAAAGATAGAAGAGCTTACCTGCTG-A-A----GAT--GGAACATTCAAGAAATGCTTATAAAAATAATGTATTCAGGTTACCACTTGAACAAGTATATATATGTTCTGTTTGTTTTGTATCGCACTACTATGCAGTGAAATGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U345232" ref_strand="+" ref_description="SGN-U345232        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G15520.1 | Symbol: PDR12 | ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots. | chr1:5331988-5338170 REVERSE | Aliases: T16N11.3, T16N11_3, PDR12, PLEIOTROPIC DRUG RESISTANCE 12 (evalue: 7e-67, score=251) genbank/nr: gi|41052472|dbj|BAD07483.1| PDR-type ABC transporter 1 [Nicotiana tabacum](evalue: 7e-95, score=281)">
      <seq>ttgcagttgtaagatcccgagggtttttcccaaatgcatactggtactggataggtgtcagcgcacttattggtttcataatcgtctttaacatcttctacagacttgcactcgtttttctcaacccatttggtaagccgcaaggtatgatatcagaagacagtgatgatgccaaaacacaaacactgagaaagaagtatccactagtgagggccagaataagaaaaagggaatggttcttcaatttgaaccgcattccatcaccttcaatgaagttacgtactctgttgacatgcctcaggaaatgaaaaatcaaggtgccactgaagatagattggtacttctgaatggtgtatgcggagctttcaggcccggtgttttgacagcattgatgggagttagtggcgctggaaaaacaacgttaatggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="63871" stop="65045"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64171" g_stop="64296" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="126" r_length="126" r_score="0.873"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64297" i_stop="64372" i_length="76">
            <donor d_prob="0.987" d_score="0.88"/>
            <acceptor a_prob="0.997" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64373" g_stop="64548" g_length="176"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="301" r_length="175" r_score="0.938"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64549" i_stop="64616" i_length="68">
            <donor d_prob="0.990" d_score="0.92"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="64617" g_stop="64745" g_length="129"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="430" r_length="129" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U345232" ref_strand="+">
        <total_alignment_score>0.930</total_alignment_score>
        <cumulative_length_of_scored_exons>431</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345232" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64171" e_stop="64296"/>
          <exon e_start="64373" e_stop="64548"/>
          <exon e_start="64617" e_stop="64745"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTACAGTTGTAAGATCTCGAGGGTTCTTCACAAATGCATACTGGTACTGGATAGGCGTTGGTGCACAAATTGGTTTCACAATCGTCTTTAACATCTGCTACAGTATTGCACTCGCTTATCTCAACCGTGAGTATCTTTAGAATTTCACCATTCATTTTCCCCTAAAGGTGAAAACATTGAATGTTTAGTTGAATATCTACAGCATTTGGTAAGCCGCAAGGTATGATATCAGAAGACAGCAATGATGCCAAAACAACGAGCACTGAGAAAGAAGTGTCCACTAGTGAGGGCCAGAATAAGAAAAAGGGAATGGTTCTTCCATTTGAACCGCATTCTATAACCTTCGATGAAGTTACATACTCTGTTGACATGCCTCAGGTAACTAGCTGGGAATTGTTGTAGGATAAAAAAAATTATATTACTTAACTTTCCAATGATACTTCCAGGAAATGAAAAATCAAGGTGTCACTGAAGATAGATTGGTACTTCTGAATGGTGTATCTGGAGCTTTCAGGCCCGGTGTTTTGACAGCATTGATGGGAGTTAGTGGCGCTGGAAAAACAACGTTAATGGAT</genome_strand>
        <mrna_strand>TTGCAGTTGTAAGATCCCGAGGGTTTTTCCCAAATGCATACTGGTACTGGATAGGTGTCAGCGCACTTATTGGTTTCATAATCGTCTTTAACATCTTCTACAGACTTGCACTCGTTTTTCTCAACC............................................................................CATTTGGTAAGCCGCAAGGTATGATATCAGAAGACAGTGATGATGCCAAAAC-ACAAACACTGAGAAAGAAGTATCCACTAGTGAGGGCCAGAATAAGAAAAAGGGAATGGTTCTTCAATTTGAACCGCATTCCATCACCTTCAATGAAGTTACGTACTCTGTTGACATGCCTCAG....................................................................GAAATGAAAAATCAAGGTGCCACTGAAGATAGATTGGTACTTCTGAATGGTGTATGCGGAGCTTTCAGGCCCGGTGTTTTGACAGCATTGATGGGAGTTAGTGGCGCTGGAAAAACAACGTTAATGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U324763" ref_strand="+" ref_description="SGN-U324763        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT1G15520.1 | Symbol: PDR12 | ABC transporter family involved in resistant to lead. Localizes to plasma membrane. Upregulated by lead. Expressed in leaves, flowers. Not expressed in roots. | chr1:5331988-5338170 REVERSE | Aliases: T16N11.3, T16N11_3, PDR12, PLEIOTROPIC DRUG RESISTANCE 12 (evalue: 2e-71, score=265) genbank/nr: gi|41052472|dbj|BAD07483.1| PDR-type ABC transporter 1 [Nicotiana tabacum](evalue: 2e-80, score=301)">
      <seq>agcgtacagtattttacagagaaagagctgctggaatgtattcttccctcccctatgcctttggacaaactttcattgaaataccatatgtctttgtgcaagctgttacctatgctgttatcatctatgctatgatcggatttgaatggacagtgagcaagttcttttggtacttgtttatcatgtatttcactttcttgtacttcaccttctatggtatgatgagcgttgccgtttccccaaatcaaaatattgcgcaaattgtctctctcttcggctattcaatgtggaatcttttctcaggattcatgattccgcgacctagtatgcccatatggtggagatggtactattgggctgatcctgttgcctggacattgtatggtttggttgtatcgcaattcggagacctccaagataaaattactgatatagatgagacatccaaacaattcttgaggcgttactttgggttcaagcatgattttcttggagtagttgcagctgtgactgttgcatatgctgttgtttttgccttcacatttggtttggccattaagtttttcaacttccagaaaagatagaagagcttacctgctgaagatggaacattcaagaaatgcttataaaaataatgtattcaggttaccacttgaacaagtatatatatgttctgtttgttttgtatcgcactactatgcagtgaaatgattttgtaagtttgaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="65813" stop="67301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66113" g_stop="66180" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66181" i_stop="66250" i_length="70">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.379" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="66251" g_stop="66505" g_length="255"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="323" r_length="255" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="66506" i_stop="66598" i_length="93">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="66599" g_stop="67000" g_length="402"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="725" r_length="402" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="726" polyA_stop="739"/>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U324763" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U324763" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66113" e_stop="66180"/>
          <exon e_start="66251" e_stop="66505"/>
          <exon e_start="66599" e_stop="67000"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCGTACAGTATTTTACAGAGAAAGAGCTGCTGGAATGTATTCTTCCCTCCCCTATGCCTTTGGACAAGTAAGCATATGATTTAACTTCTTACAAGCCAATATCCGGTTTAAAAAGTCTAAATAACTCTAATCTGCAGACTTTCATTGAAATACCATATGTCTTTGTGCAAGCTGTTACCTATGCTGTTATCATCTATGCTATGATCGGATTTGAATGGACAGTGAGCAAATTCTTTTGGTACTTGTTTATCATGTATTTCACTTTCTTGTATTTCACCTTCTATGGTATGATGAGTGTTGCCGTTTCCCCAAATCAAAATATTGCGCAAATTGTCTCTCTCTTCGGCTATTCAATGTGGAATCTTTTCTCAGGATTCATGATTCCGCGACCTGTAAGTTGTTGAAACAATTCCATTTTGTTTTACATGAAAATCAATTTAGAGCTTGAAAATGATGACATGTTTTCATTGATTTTAAATAACCAGAGTATGCCCATATGGTGGAGATGGTACTATTGGGCTGATCCTGTTGCCTGGACATTGTATGGTTTGGTTGTATCGCAATTCGGAGACCTCCAAGATAAAATTACTGATATAGATGAGACATCCAAACAATTCTTGAGGCGTTACTTTGGGTTCAAGCATGATTTTCTTGGAGTAGTTGCAGCTGTGACTGTTGCATATGCTGTTGTTTTTGCCTTCACATTTGGTTTGGCCATTAAGTTTTTCAACTTCCAGAAAAGATAGAAGAGCTTACCTGCTGAAGATGGAACATTCATGAAATGGTTATAAAACTAGTGTATTCAGGTTACCACTTGAACAAGTATATATATGTTCTGTTTGTTTTGTATCGCACTACTATGCAGTGAAATGATTTTGTAAGTTTGA</genome_strand>
        <mrna_strand>AGCGTACAGTATTTTACAGAGAAAGAGCTGCTGGAATGTATTCTTCCCTCCCCTATGCCTTTGGACAA......................................................................ACTTTCATTGAAATACCATATGTCTTTGTGCAAGCTGTTACCTATGCTGTTATCATCTATGCTATGATCGGATTTGAATGGACAGTGAGCAAGTTCTTTTGGTACTTGTTTATCATGTATTTCACTTTCTTGTACTTCACCTTCTATGGTATGATGAGCGTTGCCGTTTCCCCAAATCAAAATATTGCGCAAATTGTCTCTCTCTTCGGCTATTCAATGTGGAATCTTTTCTCAGGATTCATGATTCCGCGACCT.............................................................................................AGTATGCCCATATGGTGGAGATGGTACTATTGGGCTGATCCTGTTGCCTGGACATTGTATGGTTTGGTTGTATCGCAATTCGGAGACCTCCAAGATAAAATTACTGATATAGATGAGACATCCAAACAATTCTTGAGGCGTTACTTTGGGTTCAAGCATGATTTTCTTGGAGTAGTTGCAGCTGTGACTGTTGCATATGCTGTTGTTTTTGCCTTCACATTTGGTTTGGCCATTAAGTTTTTCAACTTCCAGAAAAGATAGAAGAGCTTACCTGCTGAAGATGGAACATTCAAGAAATGCTTATAAAAATAATGTATTCAGGTTACCACTTGAACAAGTATATATATGTTCTGTTTGTTTTGTATCGCACTACTATGCAGTGAAATGATTTTGTAAGTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U338083" ref_strand="-" ref_description="SGN-U338083        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: hypothetical(evalue: 4e-54, score=214)">
      <seq>catttggtttggccattaagtttttcaacttccagaaaagatagaagagcttacctgctgaagatggaacattcaagaaatgcttataaaaataatgtattcaggttaccaagggaacaagtatatatatgttctgtttgttttgtatttatcgactatgcagtgaaatgattttgtaagttgaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="66516" stop="67301"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66816" g_stop="66994" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="179" r_length="179" r_score="0.933"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="184" polyA_stop="197"/>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U338083" ref_strand="-">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>179</cumulative_length_of_scored_exons>
        <coverage percentage="0.909" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U338083" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="66816" e_stop="66994"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATTTGGTTTGGCCATTAAGTTTTTCAACTTCCAGAAAAGATAGAAGAGCTTACCTGCTGAAGATGGAACATTCATGAAATGGTTATAAAACTAGTGTATTCAGGTTACCACTTGAACAAGTATATATATGTTCTGTTTGTTTTGTATCGCACTACTATGCAGTGAAATGATTTTGTAA</genome_strand>
        <mrna_strand>CATTTGGTTTGGCCATTAAGTTTTTCAACTTCCAGAAAAGATAGAAGAGCTTACCTGCTGAAGATGGAACATTCAAGAAATGCTTATAAAAATAATGTATTCAGGTTACCAAGGGAACAAGTATATATATGTTCTGTTTGTTTTGTATTTATCGACTATGCAGTGAAATGATTTTGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U321025" ref_strand="+" ref_description="SGN-U321025        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: AT3G12120.1 | Symbol: None | omega-6 fatty acid desaturase, endoplasmic reticulum (FAD2) / delta-12 desaturase, identical to omega-6 fatty acid desaturase, endoplasmic reticulum (FAD2) SP:P46313 (Arabidopsis thaliana (Mouse-ear cress)) (Plant Cell 6:147-158(1994)) | chr3:3860291-3863036 REVERSE | Aliases: T21B14.6 (evalue: 3e-154, score=541) genbank/nr: gi|59896214|gb|AAX11454.1| microsomal oleic acid desaturase [Sesamum indicum] >gi|8886726|gb|AAF80560.1| omega-6 fatty acid desaturase [Sesamum indicum] (evalue: 5e-173, score=610)">
      <seq>tttgaactttgagatttaggatatagcaaaagcaaaaatgggaggtggtggtaattctatgagtaatccaacaactaaaaatcgagttccaagttcaaagcccccttttacgattggtgatatcaagaaggctatccctcctcattgctttcaacgctctctcgttcgctcctcttcctatcttatttacgatctcatacttgtcttcatcttctattacatcgcctctacttatttccacgtccttccaaaaccgtattatccatacctagcatggcctatttattggatcgttcaaggatgtgtttgcaccgcactatgggtcattgcccatgaatgtggccaccaatcctttagtgattaccaatggataaatgacactatcggttttatcctccactctgcacttttaacaccatacttctcatggaaatatagtcatcgtcgtcatcactccaatactaattcccttgagcatgatgaaaatcatgtgcccaaacttgaagtcaaactaaaatggtacactaaattatacgtgaataatccacttggacgattattattaattgtcttcacactcactgctggcttacctttatactatgccatcaatatagccggtagaccttatgatcgttttgcaagtcattatgatccatatagccctatctacaatgaccgtgagagactacaaatttacatctcagatgcaggtgtgattgcaactatttatttattatatcgcgttgctctaacacaaggcctaacttgggttatatgcatctatggagtaccccttgtaattgtgaatgggttcatagtgttaataactttactgcatcacactcatgcttcattgccacattatgattcatcagagtggagttggctaaaaggagctctagctacggtagatagagactatggtgtcctaaataaggtgtttcatcatatcgtagatacacacgttctacatcatctattttcaagtataccacattatcatgctgtcgaggcaaccaaggccatcaagccgttactaggagaatactaccaatttgatggaactccattttacaaagcaatatggagggattttaatgagtgtcaatatgtggagaaagatgaagcatctcaacatcagggtattttctggtatacaaattacaacacataatattcattaataacaactggcttacgaatgtgttagccaatgcatgagttgttgttgttatttgtattttggatggtgtgttatcataataataataatattgttactttaaaaaaaatgtaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="-" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="79336" stop="77447"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79122" g_stop="79110" g_length="13"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="13" r_length="13" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79109" i_stop="79023" i_length="87">
            <donor d_prob="0.978" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79022" g_stop="77748" g_length="1275"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="1288" r_length="1275" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1299" polyA_stop="1312"/>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="-" ref_id="SGN-U321025" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1288</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321025" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79122" e_stop="79110"/>
          <exon e_start="79022" e_stop="77748"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAACTTTGAGGTATTTAAATTAATTTCTTTCTTTTCATAACAAAAAATTTACCAATTTTAATTATGAAGCATGATGATTTAAATTTGATTATTGCAGATTTAGGATATAGCAAAAGCAAAAATGGGAGGTGGTGGTAATTCTATGAGTAATCCAACAACTAAAAATCGAGTTCCAAGTTCAAAGCCCCCTTTTACGATTGGTGATATCAAGAAGGCTATCCCTCCTCATTGCTTTCAACGCTCTCTCGTTCGCTCCTCTTCCTATCTTATTTACGATCTCATACTTGTCTTCATCTTCTATTACATCGCCTCTACTTATTTCCACGTCCTTCCAAAACCGTATTATCCATACCTAGCATGGCCTATTTATTGGATCGTTCAAGGATGTGTTTGCACCGCACTATGGGTCATTGCCCATGAATGTGGCCACCAATCCTTTAGTGATTACCAATGGATAAATGACACTATCGGTTTTATCCTCCACTCTGCACTTTTAACACCATACTTCTCATGGAAATATAGTCATCGTCGTCATCACTCCAATACTAATTCCCTTGAGCATGATGAAAATCATGTGCCCAAACTTGAAGTCAAACTAAAATGGTACACTAAATTATACGTGAATAATCCACTTGGACGATTATTATTAATTGTCTTCACACTCACTGCTGGCTTACCTTTATACTATGCCATCAATATAGCCGGTAGACCTTATGATCGTTTTGCAAGTCATTATGATCCATATAGCCCTATCTACAATGACCGTGAGAGACTACAAATTTACATCTCAGATGCAGGTGTGATTGCAACTATTTATTTATTATATCGCGTTGCTCTAACACAAGGCCTAACTTGGGTTATATGCATCTATGGAGTACCCCTTGTAATTGTGAATGGGTTCATAGTGTTAATAACTTTACTGCATCACACTCATGCTTCATTGCCACATTATGATTCATCAGAGTGGAGTTGGCTAAAAGGAGCTCTAGCTACGGTAGATAGAGACTATGGTGTCCTAAATAAGGTGTTTCATCATATCGTAGATACACACGTTCTACATCATCTATTTTCAAGTATACCACATTATCATGCTGTCGAGGCAACCAAGGCCATCAAGCCGTTACTAGGAGAATACTACCAATTTGATGGAACTCCATTTTACAAAGCAATATGGAGGGATTTTAATGAGTGTCAATATGTGGAGAAAGATGAAGCATCTCAACATCAGGGTATTTTCTGGTATACAAATTACAACACATAATATTCATTAATAACAACTGGCTTACGAATGTGTTAGCCAATGCATGAGTTGTTGTTGTTATTTGTATTTTGGATGGTGTGTTATCATAATAATAATAATATTGTTACTTTA</genome_strand>
        <mrna_strand>TTTGAACTTTGAG.......................................................................................ATTTAGGATATAGCAAAAGCAAAAATGGGAGGTGGTGGTAATTCTATGAGTAATCCAACAACTAAAAATCGAGTTCCAAGTTCAAAGCCCCCTTTTACGATTGGTGATATCAAGAAGGCTATCCCTCCTCATTGCTTTCAACGCTCTCTCGTTCGCTCCTCTTCCTATCTTATTTACGATCTCATACTTGTCTTCATCTTCTATTACATCGCCTCTACTTATTTCCACGTCCTTCCAAAACCGTATTATCCATACCTAGCATGGCCTATTTATTGGATCGTTCAAGGATGTGTTTGCACCGCACTATGGGTCATTGCCCATGAATGTGGCCACCAATCCTTTAGTGATTACCAATGGATAAATGACACTATCGGTTTTATCCTCCACTCTGCACTTTTAACACCATACTTCTCATGGAAATATAGTCATCGTCGTCATCACTCCAATACTAATTCCCTTGAGCATGATGAAAATCATGTGCCCAAACTTGAAGTCAAACTAAAATGGTACACTAAATTATACGTGAATAATCCACTTGGACGATTATTATTAATTGTCTTCACACTCACTGCTGGCTTACCTTTATACTATGCCATCAATATAGCCGGTAGACCTTATGATCGTTTTGCAAGTCATTATGATCCATATAGCCCTATCTACAATGACCGTGAGAGACTACAAATTTACATCTCAGATGCAGGTGTGATTGCAACTATTTATTTATTATATCGCGTTGCTCTAACACAAGGCCTAACTTGGGTTATATGCATCTATGGAGTACCCCTTGTAATTGTGAATGGGTTCATAGTGTTAATAACTTTACTGCATCACACTCATGCTTCATTGCCACATTATGATTCATCAGAGTGGAGTTGGCTAAAAGGAGCTCTAGCTACGGTAGATAGAGACTATGGTGTCCTAAATAAGGTGTTTCATCATATCGTAGATACACACGTTCTACATCATCTATTTTCAAGTATACCACATTATCATGCTGTCGAGGCAACCAAGGCCATCAAGCCGTTACTAGGAGAATACTACCAATTTGATGGAACTCCATTTTACAAAGCAATATGGAGGGATTTTAATGAGTGTCAATATGTGGAGAAAGATGAAGCATCTCAACATCAGGGTATTTTCTGGTATACAAATTACAACACATAATATTCATTAATAACAACTGGCTTACGAATGTGTTAGCCAATGCATGAGTTGTTGTTGTTATTTGTATTTTGGATGGTGTGTTATCATAATAATAATAATATTGTTACTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-lGe8J8/lycopersicum_combined_unigene_seqs" ref_id="SGN-U341197" ref_strand="+" ref_description="SGN-U341197        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>gagataattgtgtgtaattatatatcataggtgcatgttgcctagcaaaggtaaacgactttcataattatgttacaatctccatataattagaattgtaattatgtgacaagtatacaacaatttcaacatctcacttaattaaactcccttaattatattagtataagggttatattctagaaaatcaatttaagtaattttagaagttaaggaaggagccctaaacctaatattttcctttgtagtctaaatagtgtaatataataatatggtaccgtagattcaaagtggactcctttattttttgagttatttaagttaccttttataatcttcgtccataacaataataacatatttggttagattataagtagggtctatgaagagtagtgcgtacataaatctaagagtttccaatagatctttattttaatgattgctgatatatggagtgataaataatacacgaaatatttgaatatataaaaataatttttttaaaatcaccctttttcttgcactagcttaaaaggagatcaatatgtaatttaaaacaaattttacgtacctagtcatttcgttaaaaaaaatgtattttaagtacatgtgttgttaaaaataatgaactacttagttgttttacaaagaaattaaactcaaagtgatttgatatcaataggaaaaacaaactttgattagtcaaatatgttatgcgtaactaatactacttcctatttttttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0004A15-SIL6E/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0004A15.1" temp_strand="+" temp_description="C12HBa0004A15.1  AC217494.1 htgs_phase:1 submitted_to_sgn_as:C12HBa0004A15 upload_account_name:italy *** WORKING DRAFT SEQUENCE ***">
        <position start="91649" stop="92998"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="91949" g_stop="92698" g_length="750"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="750" r_length="750" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0004A15.1" gen_strand="+" ref_id="SGN-U341197" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0004A15.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341197" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="91949" e_stop="92698"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGATAATTGTGTGTAATTATATATCATAGGTGCATGTTGCCTAGCAAAGGTAAACGACTTTCATAATTATGTTACAATCTCCATATAATTAGAATTGTAATTATGTGACAAGTATACAACAATTTCAACATCTCACTTAATTAAACTCCCTTAATTATATTAGTATAAGGGTTATATTCTAGAAAATCAATTTAAGTAATTTTAGAAGTTAAGGAAGGAGCCCTAAACCTAATATTTTCCTTTGTAGTCTAAATAGTGTAATATAATAATATGGTACCGTAGATTCAAAGTGGACTCCTTTATTTTTTGAGTTATTTAAGTTACCTTTTATAATCTTCGTCCATAACAATAATAACATATTTGGTTAGATTATAAGTAGGGTCTATGAAGAGTAGTGCGTACATAAATCTAAGAGTTTCCAATAGATCTTTATTTTAATGATTGCTGATATATGGAGTGATAAATAATACACCAAATATTTGAATATATAAAAATAATTTTTTTAAAATCACCCTTTTTCTTGCACTAGCTTAAAAGGAGATCAATATGTAATTTAAAACAAATTTTACGTACCTAGTCATTTCGTTAAAAAAAATGTATTTTAAGTACATGTGTTGTTAAAAATAATGAACTACTTAGTTGTTTTACAAAGAAATTGAACTCAAAGTGATTTGATATCAATAGGAAAAACAAACTTTGATTAGTCAAATATGTTATGCGTAACTAATACTACTTCCTATTTTTTTTTT</genome_strand>
        <mrna_strand>GAGATAATTGTGTGTAATTATATATCATAGGTGCATGTTGCCTAGCAAAGGTAAACGACTTTCATAATTATGTTACAATCTCCATATAATTAGAATTGTAATTATGTGACAAGTATACAACAATTTCAACATCTCACTTAATTAAACTCCCTTAATTATATTAGTATAAGGGTTATATTCTAGAAAATCAATTTAAGTAATTTTAGAAGTTAAGGAAGGAGCCCTAAACCTAATATTTTCCTTTGTAGTCTAAATAGTGTAATATAATAATATGGTACCGTAGATTCAAAGTGGACTCCTTTATTTTTTGAGTTATTTAAGTTACCTTTTATAATCTTCGTCCATAACAATAATAACATATTTGGTTAGATTATAAGTAGGGTCTATGAAGAGTAGTGCGTACATAAATCTAAGAGTTTCCAATAGATCTTTATTTTAATGATTGCTGATATATGGAGTGATAAATAATACACGAAATATTTGAATATATAAAAATAATTTTTTTAAAATCACCCTTTTTCTTGCACTAGCTTAAAAGGAGATCAATATGTAATTTAAAACAAATTTTACGTACCTAGTCATTTCGTTAAAAAAAATGTATTTTAAGTACATGTGTTGTTAAAAATAATGAACTACTTAGTTGTTTTACAAAGAAATTAAACTCAAAGTGATTTGATATCAATAGGAAAAACAAACTTTGATTAGTCAAATATGTTATGCGTAACTAATACTACTTCCTATTTTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>16</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="4250" PGL_stop="1345"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="4250" e_stop="4197"/>
            <exon e_start="4028" e_stop="3817"/>
            <exon e_start="3731" e_stop="3499"/>
            <exon e_start="3428" e_stop="3209"/>
            <exon e_start="3126" e_stop="2745"/>
            <exon e_start="2671" e_stop="2564"/>
            <exon e_start="2424" e_stop="2221"/>
            <exon e_start="2126" e_stop="2025"/>
            <exon e_start="1938" e_stop="1765"/>
            <exon e_start="1680" e_stop="1345"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.680" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.561" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.553" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.890" e_score="1.000"/>
          <exon-intron don_prob="0.979" acc_prob="0.939" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.713" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="4250" e_stop="4197" e_length="54"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.680">
            <gDNA_intron_boundary i_start="4196" i_stop="4029" i_length="168"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4028" e_stop="3817" e_length="212"/>
          </exon>
          <intron i_serial="2" don_prob="0.982" acc_prob="0.561">
            <gDNA_intron_boundary i_start="3816" i_stop="3732" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="3731" e_stop="3499" e_length="233"/>
          </exon>
          <intron i_serial="3" don_prob="0.993" acc_prob="0.553">
            <gDNA_intron_boundary i_start="3498" i_stop="3429" i_length="70"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="3428" e_stop="3209" e_length="220"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.890">
            <gDNA_intron_boundary i_start="3208" i_stop="3127" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="3126" e_stop="2745" e_length="382"/>
          </exon>
          <intron i_serial="5" don_prob="0.979" acc_prob="0.939">
            <gDNA_intron_boundary i_start="2744" i_stop="2672" i_length="73"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="2671" e_stop="2564" e_length="108"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.975">
            <gDNA_intron_boundary i_start="2563" i_stop="2425" i_length="139"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="2424" e_stop="2221" e_length="204"/>
          </exon>
          <intron i_serial="7" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="2220" i_stop="2127" i_length="94"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="2126" e_stop="2025" e_length="102"/>
          </exon>
          <intron i_serial="8" don_prob="0.713" acc_prob="0.998">
            <gDNA_intron_boundary i_start="2024" i_stop="1939" i_length="86"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="1938" e_stop="1765" e_length="174"/>
          </exon>
          <intron i_serial="9" don_prob="0.968" acc_prob="0.998">
            <gDNA_intron_boundary i_start="1764" i_stop="1681" i_length="84"/>
          </intron>
          <exon e_serial="10" e_score="0.997">
            <gDNA_exon_boundary e_start="1680" e_stop="1345" e_length="336"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4250" stop="4197"/>
              <exon start="4028" stop="3817"/>
              <exon start="3731" stop="3499"/>
              <exon start="3428" stop="3209"/>
              <exon start="3126" stop="2745"/>
              <exon start="2671" stop="2564"/>
              <exon start="2424" stop="2221"/>
              <exon start="2126" stop="2025"/>
              <exon start="1938" stop="1765"/>
              <exon start="1680" stop="1345"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316565" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTAAACCTGGAATTCTCTCAGAATGGCCATGGGCAAACCTTGGCAACTTTAAG : TACTTGGTGTTGGCACCATTTGTTGGTCATAGCATATACTCATTCTTGAGGGATGGAGATATTGGATACATAGCCATACTTCCATTTCTACTCTTCAGATTTATTCACAACCAGATATGGATATCGTTATCGCGCCACAGGACTGCTAAGGGTAATAATAGAATTGTTGATAGAAGCATTGAGTTTGATCAAGTTGATAGAGAAAACAACTG : GGATGATCAAATTATATTTAACGGGCTATTATACTATGTTGGATACCTGAGAATGGAACAAGTTCATCACTTGCCTCTATGGAGAAGTGGTGGATTCATTGTAACTGCATTGGCCCATATTGGTCCTGTTGAGTTTATCTATTATTGGTTTCATAGAGCTCTGCATCACCATTTTCTCTATTCGCGTTATCATTCTCATCATCACTCCTCTATTGTTACTCAACCTATCAGTG : CATTTATTCATCCGTTTGCTGAGGTCGCATCATATTATGCCATCTTTGCTGTTCCTGTAATCGCAACTGAACTCACTGGGACTACTTCTATAGCTACAATCACTCTTTATGTTATCTTTACTGATTTCATGAACAACTTGGGCCATTGTAACTTTGAGGTGATTCCAAAGTGGATCTTCTCTCTGTTTCCACCTCTCAAGTACTTGATATATACGTCCTC : GTACCACTCACTACATCACACGCAATTCAGAACTAATTATTCTCTTTTCATGCCAATATATGACTATATTTTTGGTACAATGGACAAGTCCAGTGACACATTGTATGAAAAGTCACTTGAGAAAAAAGCGGAACTGCCTCATGTGGTTCACCTTACACATCTAACAACCTTACAATCCATCTATCATCTCCGTCTAGGATTTTCATCGTTGGCCTCAAAGCCTCACATGACTAGCTCTAAGTGGTATTTGTGGTTAATGTGGCCTGTCACGCTATGGTCAATACTCATTACTTGGATTTATAGTCACACATTTGTTATCGAGAGGAATTTGTTCAAGGATCTCAAATTACAAACTTGGGCTATTCCAAAGTTTCGCAAACAA : TACTTTAGTCAATGGCAAAGAAAGAGTATTAATAATTTGATCAAGGAAGCCATCATGGAAGCAGATCAGAAAGGCGTAAAGGTTTTGAGCCTCGGACTCTTAAATCAG : GACGAGAAGTTGAATAACAATGGTGAAATTTGCATAAGGAAGCATCCTGAGCTGAAAGTTAAATTGGTAGATGGAAGTAGCCTAGTTGTTGCTGTGGTTCTCAACTCCATTCCTAAAGGAACTTCCCAAGTGGTATTACAAGCTGGTCGTTTGTCCAAAGTTGCTAATGCTATTGCCCTCGCCTTGTGTCAACGAGGAATTCAG : GTTATCACGTTAGACGAAGAAGAGTACAAGGGACTTAAAGCAAGGTTTACCCCTGAGGCTGCAGCTAATTTGGTCTTGTTGAAAAGTACTTGTGTTTCAAAG : ACGTGGTTAGTAGATGATGGATTGAGTGAAGATGAACAATTGAAAGCACCAAAAGGAACATTGTTTATTCCTTATTCACCATTTCCACCAAAGAAAGTTCGTGAGGATTGCTTCTACTTGAGCACACCAGCCATGATTTGTCCAAAACATGTTCAAAATGTAGACTCTTGTGAG : AACTGGCTGCCAAGAAGAGTGATGAGTGCATCGAGAATAGCTGGAATTTTGCACGCGTTTGAAGGTTGGAACGAGCACGAGTGTGGTGACATGATGTTTGATATTGACAAAGTATGGAAAGCTAGTCTTGATCATGGTTTTTCACCATTAGATGTAGAAATAATGTAGATTATTATTTTGTAAGATCACAGTTATAAGCTTGTAATAATGGTTAATAATTCCTAGCAACTCAATGGCCTGTACTATATGTAATAAATAACTTTTGACAAATTTAAAAGACCATTATTACCTAAACACAAACATATAAGGATCCATTTTTCATTACAAAAATCAACT</gDNA_template>
            <first_frame> S  K  P  G  I  L  S  E  W  P  W  A  N  L  G  N  F  K  :  Y  L  V  L  A  P  F  V  G  H  S  I  Y  S  F  L  R  D  G  D  I  G  Y  I  A  I  L  P  F  L  L  F  R  F  I  H  N  Q  I  W  I  S  L  S  R  H  R  T  A  K  G  N  N  R  I  V  D  R  S  I  E  F  D  Q  V  D  R  E  N  N  W :   D  D  Q  I  I  F  N  G  L  L  Y  Y  V  G  Y  L  R  M  E  Q  V  H  H  L  P  L  W  R  S  G  G  F  I  V  T  A  L  A  H  I  G  P  V  E  F  I  Y  Y  W  F  H  R  A  L  H  H  H  F  L  Y  S  R  Y  H  S  H  H  H  S  S  I  V  T  Q  P  I  S   : A  F  I  H  P  F  A  E  V  A  S  Y  Y  A  I  F  A  V  P  V  I  A  T  E  L  T  G  T  T  S  I  A  T  I  T  L  Y  V  I  F  T  D  F  M  N  N  L  G  H  C  N  F  E  V  I  P  K  W  I  F  S  L  F  P  P  L  K  Y  L  I  Y  T  S  S :   Y  H  S  L  H  H  T  Q  F  R  T  N  Y  S  L  F  M  P  I  Y  D  Y  I  F  G  T  M  D  K  S  S  D  T  L  Y  E  K  S  L  E  K  K  A  E  L  P  H  V  V  H  L  T  H  L  T  T  L  Q  S  I  Y  H  L  R  L  G  F  S  S  L  A  S  K  P  H  M  T  S  S  K  W  Y  L  W  L  M  W  P  V  T  L  W  S  I  L  I  T  W  I  Y  S  H  T  F  V  I  E  R  N  L  F  K  D  L  K  L  Q  T  W  A  I  P  K  F  R  K  Q  :  Y  F  S  Q  W  Q  R  K  S  I  N  N  L  I  K  E  A  I  M  E  A  D  Q  K  G  V  K  V  L  S  L  G  L  L  N  Q  :  D  E  K  L  N  N  N  G  E  I  C  I  R  K  H  P  E  L  K  V  K  L  V  D  G  S  S  L  V  V  A  V  V  L  N  S  I  P  K  G  T  S  Q  V  V  L  Q  A  G  R  L  S  K  V  A  N  A  I  A  L  A  L  C  Q  R  G  I  Q  :  V  I  T  L  D  E  E  E  Y  K  G  L  K  A  R  F  T  P  E  A  A  A  N  L  V  L  L  K  S  T  C  V  S  K  :  T  W  L  V  D  D  G  L  S  E  D  E  Q  L  K  A  P  K  G  T  L  F  I  P  Y  S  P  F  P  P  K  K  V  R  E  D  C  F  Y  L  S  T  P  A  M  I  C  P  K  H  V  Q  N  V  D  S  C  E  :  N  W  L  P  R  R  V  M  S  A  S  R  I  A  G  I  L  H  A  F  E  G  W  N  E  H  E  C  G  D  M  M  F  D  I  D  K  V  W  K  A  S  L  D  H  G  F  S  P  L  D  V  E  I  M  *  I  I  I  L  *  D  H  S  Y  K  L  V  I  M  V  N  N  S  *  Q  L  N  G  L  Y  Y  M  *  *  I  T  F  D  K  F  K  R  P  L  L  P  K  H  K  H  I  R  I  H  F  S  L  Q  K  S  T </first_frame>
            <second_frame>  L  N  L  E  F  S  Q  N  G  H  G  Q  T  L  A  T  L  S :   T  W  C  W  H  H  L  L  V  I  A  Y  T  H  S  *  G  M  E  I  L  D  T  *  P  Y  F  H  F  Y  S  S  D  L  F  T  T  R  Y  G  Y  R  Y  R  A  T  G  L  L  R  V  I  I  E  L  L  I  E  A  L  S  L  I  K  L  I  E  K  T  T   : G  M  I  K  L  Y  L  T  G  Y  Y  T  M  L  D  T  *  E  W  N  K  F  I  T  C  L  Y  G  E  V  V  D  S  L  *  L  H  W  P  I  L  V  L  L  S  L  S  I  I  G  F  I  E  L  C  I  T  I  F  S  I  R  V  I  I  L  I  I  T  P  L  L  L  L  N  L  S  V  :  H  L  F  I  R  L  L  R  S  H  H  I  M  P  S  L  L  F  L  *  S  Q  L  N  S  L  G  L  L  L  *  L  Q  S  L  F  M  L  S  L  L  I  S  *  T  T  W  A  I  V  T  L  R  *  F  Q  S  G  S  S  L  C  F  H  L  S  S  T  *  Y  I  R  P   : R  T  T  H  Y  I  T  R  N  S  E  L  I  I  L  F  S  C  Q  Y  M  T  I  F  L  V  Q  W  T  S  P  V  T  H  C  M  K  S  H  L  R  K  K  R  N  C  L  M  W  F  T  L  H  I  *  Q  P  Y  N  P  S  I  I  S  V  *  D  F  H  R  W  P  Q  S  L  T  *  L  A  L  S  G  I  C  G  *  C  G  L  S  R  Y  G  Q  Y  S  L  L  G  F  I  V  T  H  L  L  S  R  G  I  C  S  R  I  S  N  Y  K  L  G  L  F  Q  S  F  A  N  N :   T  L  V  N  G  K  E  R  V  L  I  I  *  S  R  K  P  S  W  K  Q  I  R  K  A  *  R  F  *  A  S  D  S  *  I  R :   T  R  S  *  I  T  M  V  K  F  A  *  G  S  I  L  S  *  K  L  N  W  *  M  E  V  A  *  L  L  L  W  F  S  T  P  F  L  K  E  L  P  K  W  Y  Y  K  L  V  V  C  P  K  L  L  M  L  L  P  S  P  C  V  N  E  E  F  R :   L  S  R  *  T  K  K  S  T  R  D  L  K  Q  G  L  P  L  R  L  Q  L  I  W  S  C  *  K  V  L  V  F  Q  R :   R  G  *  *  M  M  D  *  V  K  M  N  N  *  K  H  Q  K  E  H  C  L  F  L  I  H  H  F  H  Q  R  K  F  V  R  I  A  S  T  *  A  H  Q  P  *  F  V  Q  N  M  F  K  M  *  T  L  V  R :   T  G  C  Q  E  E  *  *  V  H  R  E  *  L  E  F  C  T  R  L  K  V  G  T  S  T  S  V  V  T  *  C  L  I  L  T  K  Y  G  K  L  V  L  I  M  V  F  H  H  *  M  *  K  *  C  R  L  L  F  C  K  I  T  V  I  S  L  *  *  W  L  I  I  P  S  N  S  M  A  C  T  I  C  N  K  *  L  L  T  N  L  K  D  H  Y  Y  L  N  T  N  I  *  G  S  I  F  H  Y  K  N  Q   </second_frame>
            <third_frame>   *  T  W  N  S  L  R  M  A  M  G  K  P  W  Q  L  *   : V  L  G  V  G  T  I  C  W  S  *  H  I  L  I  L  E  G  W  R  Y  W  I  H  S  H  T  S  I  S  T  L  Q  I  Y  S  Q  P  D  M  D  I  V  I  A  P  Q  D  C  *  G  *  *  *  N  C  *  *  K  H  *  V  *  S  S  *  *  R  K  Q  L  :  G  *  S  N  Y  I  *  R  A  I  I  L  C  W  I  P  E  N  G  T  S  S  S  L  A  S  M  E  K  W  W  I  H  C  N  C  I  G  P  Y  W  S  C  *  V  Y  L  L  L  V  S  *  S  S  A  S  P  F  S  L  F  A  L  S  F  S  S  S  L  L  Y  C  Y  S  T  Y  Q  C :   I  Y  S  S  V  C  *  G  R  I  I  L  C  H  L  C  C  S  C  N  R  N  *  T  H  W  D  Y  F  Y  S  Y  N  H  S  L  C  Y  L  Y  *  F  H  E  Q  L  G  P  L  *  L  *  G  D  S  K  V  D  L  L  S  V  S  T  S  Q  V  L  D  I  Y  V  L  :  V  P  L  T  T  S  H  A  I  Q  N  *  L  F  S  F  H  A  N  I  *  L  Y  F  W  Y  N  G  Q  V  Q  *  H  I  V  *  K  V  T  *  E  K  S  G  T  A  S  C  G  S  P  Y  T  S  N  N  L  T  I  H  L  S  S  P  S  R  I  F  I  V  G  L  K  A  S  H  D  *  L  *  V  V  F  V  V  N  V  A  C  H  A  M  V  N  T  H  Y  L  D  L  *  S  H  I  C  Y  R  E  E  F  V  Q  G  S  Q  I  T  N  L  G  Y  S  K  V  S  Q  T   : I  L  *  S  M  A  K  K  E  Y  *  *  F  D  Q  G  S  H  H  G  S  R  S  E  R  R  K  G  F  E  P  R  T  L  K  S   : G  R  E  V  E  *  Q  W  *  N  L  H  K  E  A  S  *  A  E  S  *  I  G  R  W  K  *  P  S  C  C  C  G  S  Q  L  H  S  *  R  N  F  P  S  G  I  T  S  W  S  F  V  Q  S  C  *  C  Y  C  P  R  L  V  S  T  R  N  S   : G  Y  H  V  R  R  R  R  V  Q  G  T  *  S  K  V  Y  P  *  G  C  S  *  F  G  L  V  E  K  Y  L  C  F  K   : D  V  V  S  R  *  W  I  E  *  R  *  T  I  E  S  T  K  R  N  I  V  Y  S  L  F  T  I  S  T  K  E  S  S  *  G  L  L  L  L  E  H  T  S  H  D  L  S  K  T  C  S  K  C  R  L  L  *   : E  L  A  A  K  K  S  D  E  C  I  E  N  S  W  N  F  A  R  V  *  R  L  E  R  A  R  V  W  *  H  D  V  *  Y  *  Q  S  M  E  S  *  S  *  S  W  F  F  T  I  R  C  R  N  N  V  D  Y  Y  F  V  R  S  Q  L  *  A  C  N  N  G  *  *  F  L  A  T  Q  W  P  V  L  Y  V  I  N  N  F  *  Q  I  *  K  T  I  I  T  *  T  Q  T  Y  K  D  P  F  F  I  T  K  I  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="4250" stop="4197"/>
                    <exon start="4028" stop="3817"/>
                    <exon start="3731" stop="3499"/>
                    <exon start="3428" stop="3209"/>
                    <exon start="3126" stop="2745"/>
                    <exon start="2671" stop="2564"/>
                    <exon start="2424" stop="2221"/>
                    <exon start="2126" stop="2025"/>
                    <exon start="1938" stop="1765"/>
                    <exon start="1680" stop="1513"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1854</number_coding_nucleotides>
                  <number_encoded_amino_acids>618</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKPGILSEWPWANLGNFKYLVLAPFVGHSIYSFLRDGDIGYIAILPFLLFRFIHNQIWISLSRHRTAKGNNRIVDRSIEFDQVDRENNWDDQIIFNGLLYYVGYLRMEQVHHLPLWRSGGFIVTALAHIGPVEFIYYWFHRALHHHFLYSRYHSHHHSSIVTQPISAFIHPFAEVASYYAIFAVPVIATELTGTTSIATITLYVIFTDFMNNLGHCNFEVIPKWIFSLFPPLKYLIYTSSYHSLHHTQFRTNYSLFMPIYDYIFGTMDKSSDTLYEKSLEKKAELPHVVHLTHLTTLQSIYHLRLGFSSLASKPHMTSSKWYLWLMWPVTLWSILITWIYSHTFVIERNLFKDLKLQTWAIPKFRKQYFSQWQRKSINNLIKEAIMEADQKGVKVLSLGLLNQDEKLNNNGEICIRKHPELKVKLVDGSSLVVAVVLNSIPKGTSQVVLQAGRLSKVANAIALALCQRGIQVITLDEEEYKGLKARFTPEAAANLVLLKSTCVSKTWLVDDGLSEDEQLKAPKGTLFIPYSPFPPKKVREDCFYLSTPAMICPKHVQNVDSCENWLPRRVMSASRIAGILHAFEGWNEHECGDMMFDIDKVWKASLDHGFSPLDVEIM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="3443" e_stop="2816"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="3443" e_stop="2816" e_length="628"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3443" stop="2816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316566" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATGTATTTTGACAGCATTTATTCATCCGTTTGCTGAGGTCGCATCATATTATGCCATCTTTGCTGTTCCTGTAATCGCAACTGAACTCACTGGGACTACTTCTATAGCTACAATCACTCTTTATGTTATCTTTACTGATTTCATGAACAACTTGGGCCATTGTAACTTTGAGGTGATTCCAAAGTGGATCTTCTCTCTGTTTCCACCTCTCAAGTACTTGATATATACGTCCTCGTGAGTAATCTTCTTACCTCTCCCTACACATATACTCTCTGACGAATTTTTACACTATCACAACCTGTCGATGTCACTGCAGGTACCACTCACTACATCACACGCAATTCAGAACTAATTATTCTCTTTTCATGCCAATATATGACTATATTTTTGGTACAATGGACAAGTCCAGTGACACATTGTATGAAAAGTCACTTGAGAAAAAAGCGGAACTGCCTCATGTGGTTCACCTTACACATCTAACAACCTTACAATCCATCTATCATCTCCGTCTAGGATTTTCATCGTTGGCCTCAAAGCCTCACATGACTAGCTCTAAGTGGTATTTGTGGTTAATGTGGCCTGTCACGCTATGGTCAATACTCATTACTTGGATTTATAGTCACACAT</gDNA_template>
            <first_frame> D  V  F  *  Q  H  L  F  I  R  L  L  R  S  H  H  I  M  P  S  L  L  F  L  *  S  Q  L  N  S  L  G  L  L  L  *  L  Q  S  L  F  M  L  S  L  L  I  S  *  T  T  W  A  I  V  T  L  R  *  F  Q  S  G  S  S  L  C  F  H  L  S  S  T  *  Y  I  R  P  R  E  *  S  S  Y  L  S  L  H  I  Y  S  L  T  N  F  Y  T  I  T  T  C  R  C  H  C  R  Y  H  S  L  H  H  T  Q  F  R  T  N  Y  S  L  F  M  P  I  Y  D  Y  I  F  G  T  M  D  K  S  S  D  T  L  Y  E  K  S  L  E  K  K  A  E  L  P  H  V  V  H  L  T  H  L  T  T  L  Q  S  I  Y  H  L  R  L  G  F  S  S  L  A  S  K  P  H  M  T  S  S  K  W  Y  L  W  L  M  W  P  V  T  L  W  S  I  L  I  T  W  I  Y  S  H  T  </first_frame>
            <second_frame>  M  Y  F  D  S  I  Y  S  S  V  C  *  G  R  I  I  L  C  H  L  C  C  S  C  N  R  N  *  T  H  W  D  Y  F  Y  S  Y  N  H  S  L  C  Y  L  Y  *  F  H  E  Q  L  G  P  L  *  L  *  G  D  S  K  V  D  L  L  S  V  S  T  S  Q  V  L  D  I  Y  V  L  V  S  N  L  L  T  S  P  Y  T  Y  T  L  *  R  I  F  T  L  S  Q  P  V  D  V  T  A  G  T  T  H  Y  I  T  R  N  S  E  L  I  I  L  F  S  C  Q  Y  M  T  I  F  L  V  Q  W  T  S  P  V  T  H  C  M  K  S  H  L  R  K  K  R  N  C  L  M  W  F  T  L  H  I  *  Q  P  Y  N  P  S  I  I  S  V  *  D  F  H  R  W  P  Q  S  L  T  *  L  A  L  S  G  I  C  G  *  C  G  L  S  R  Y  G  Q  Y  S  L  L  G  F  I  V  T  H </second_frame>
            <third_frame>   C  I  L  T  A  F  I  H  P  F  A  E  V  A  S  Y  Y  A  I  F  A  V  P  V  I  A  T  E  L  T  G  T  T  S  I  A  T  I  T  L  Y  V  I  F  T  D  F  M  N  N  L  G  H  C  N  F  E  V  I  P  K  W  I  F  S  L  F  P  P  L  K  Y  L  I  Y  T  S  S  *  V  I  F  L  P  L  P  T  H  I  L  S  D  E  F  L  H  Y  H  N  L  S  M  S  L  Q  V  P  L  T  T  S  H  A  I  Q  N  *  L  F  S  F  H  A  N  I  *  L  Y  F  W  Y  N  G  Q  V  Q  *  H  I  V  *  K  V  T  *  E  K  S  G  T  A  S  C  G  S  P  Y  T  S  N  N  L  T  I  H  L  S  S  P  S  R  I  F  I  V  G  L  K  A  S  H  D  *  L  *  V  V  F  V  V  N  V  A  C  H  A  M  V  N  T  H  Y  L  D  L  *  S  H   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3200" stop="2817"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>384</number_coding_nucleotides>
                  <number_encoded_amino_acids>128</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSYLSLHIYSLTNFYTITTCRCHCRYHSLHHTQFRTNYSLFMPIYDYIFGTMDKSSDTLYEKSLEKKAELPHVVHLTHLTTLQSIYHLRLGFSSLASKPHMTSSKWYLWLMWPVTLWSILITWIYSHT</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="3441" stop="3205"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CILTAFIHPFAEVASYYAIFAVPVIATELTGTTSIATITLYVIFTDFMNNLGHCNFEVIPKWIFSLFPPLKYLIYTSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="9489" PGL_stop="7956"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="9489" e_stop="7956"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="9489" e_stop="7956" e_length="1534"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9489" stop="7956"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315125" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGTCTCTTTTGATGTTGGCATTAATTTAGATTAGGCGCTTATCGATCATCCTATCAAAAACTATATATGAATCTTTTAACACTTTCTTATCCTAATAATGAAAATTTTATTTATGTTTGATTTGCCATGCATGGTTGAATTGTATTCTAACTTCTGTTTAATAATATTAATTTCATATTACTTTTTATATTATAACTATCATAGTAAACCAAAATCCAAACTTAATTGGTGCAGATCTATTTTAGGATTGATCAAGAGACCATGGGAGCTGGTGGAAATATGTCTACTCCAACAACTAAAAAAAGTCATCTCCAAAGAGTTCCATCTTCGAAGCCCCCTTTTACACTTGGCGATGTGAAGAAGGCCATTCCTCCTCACTGCTTCCAACGTTCTCTTATTCGATCCTTCTCTTATCTTATTCAAGATCTCATACTTGTCTCCGTCTTCTATTATATTGCCAACACTTACTTCCATCTCCTTCCATCTCCATTAACTTACCTTGCCTGGCCCGCTTATTGGATCGCGCAAGGTTGTGTTTCCACTGGGATATGGGTCATTGGACACGAATGTGGTCATCATGGCTTCAGTGATTACCAATGGGTAGATGACACTGTTGGTCTCATCCTACATTCTGCACTTTTAACACCATACTTTGCATGGAAGCATAGTCATCGGCGTCATCATGCCAACACTGGCTCCCTTGAGAATGATGAAGTGTACATACCTAGGTTTAAATCCAAACTGAGATGGTACTACAAATACTTGAACAATCCATTAGGACGAGTATTCGTACTTGCCTTCACCCTCACCTTTGCCTGGCCTTTATACTTGATGTTCAATATCTCAGGCAAAAAATATGAACGTTTTGCATGTCACTATGATCCAAATAGCCCAATCTATTCTAACCGCGAGAGAATGCAAATCTACATTTCAGATGCAGGTGTGATTGCAGCTACTTATGTATTATACCGCCTTGCTATGACACAAGGGCTAACTTGGGTTCTGTGTATGTACGGAGTGCCTCTCCTTATCGTGAATGGATTTATAGTGTTGATCACTCTTATGCACCACACTCATGCTTCATTGCCACATTATGATTCATCGGAGTGGGATTATCTAAGAGGAGCTTTAGCTACCGTAGATAGAGACTATGGTATACTAAACAAGGTGTTCCATAATGTTACTGATACTCATGTCTTGCATCATATATTCTCATACATATCACATTACCATGCAATGGAGGCGACCAACGCGATTAAGCCATTGCTAGGAGATTATTACCAAGTTGATGATACCCCAATTTTAAAGGCAATGTGGAGGGATACAAAGGAGTGCATCTATGTAGAGAAGGACGAAGGATCTCAAGGAAGAGGTGTTTATTGGTATAAAAACAAGCTTTGAAAGTAGAATACCAAGTAATTGGTTAAATCTTTTAACCTAATAAGAAGATGCAAGTATTTTGAATAATTATGTGTGTTTTTGTTGTATTTTATTGTTAAATGTTGGTTTTAGTTGTTACTATTGTATTGTTAA</gDNA_template>
            <first_frame> L  S  L  L  M  L  A  L  I  *  I  R  R  L  S  I  I  L  S  K  T  I  Y  E  S  F  N  T  F  L  S  *  *  *  K  F  Y  L  C  L  I  C  H  A  W  L  N  C  I  L  T  S  V  *  *  Y  *  F  H  I  T  F  Y  I  I  T  I  I  V  N  Q  N  P  N  L  I  G  A  D  L  F  *  D  *  S  R  D  H  G  S  W  W  K  Y  V  Y  S  N  N  *  K  K  S  S  P  K  S  S  I  F  E  A  P  F  Y  T  W  R  C  E  E  G  H  S  S  S  L  L  P  T  F  S  Y  S  I  L  L  L  S  Y  S  R  S  H  T  C  L  R  L  L  L  Y  C  Q  H  L  L  P  S  P  S  I  S  I  N  L  P  C  L  A  R  L  L  D  R  A  R  L  C  F  H  W  D  M  G  H  W  T  R  M  W  S  S  W  L  Q  *  L  P  M  G  R  *  H  C  W  S  H  P  T  F  C  T  F  N  T  I  L  C  M  E  A  *  S  S  A  S  S  C  Q  H  W  L  P  *  E  *  *  S  V  H  T  *  V  *  I  Q  T  E  M  V  L  Q  I  L  E  Q  S  I  R  T  S  I  R  T  C  L  H  P  H  L  C  L  A  F  I  L  D  V  Q  Y  L  R  Q  K  I  *  T  F  C  M  S  L  *  S  K  *  P  N  L  F  *  P  R  E  N  A  N  L  H  F  R  C  R  C  D  C  S  Y  L  C  I  I  P  P  C  Y  D  T  R  A  N  L  G  S  V  Y  V  R  S  A  S  P  Y  R  E  W  I  Y  S  V  D  H  S  Y  A  P  H  S  C  F  I  A  T  L  *  F  I  G  V  G  L  S  K  R  S  F  S  Y  R  R  *  R  L  W  Y  T  K  Q  G  V  P  *  C  Y  *  Y  S  C  L  A  S  Y  I  L  I  H  I  T  L  P  C  N  G  G  D  Q  R  D  *  A  I  A  R  R  L  L  P  S  *  *  Y  P  N  F  K  G  N  V  E  G  Y  K  G  V  H  L  C  R  E  G  R  R  I  S  R  K  R  C  L  L  V  *  K  Q  A  L  K  V  E  Y  Q  V  I  G  *  I  F  *  P  N  K  K  M  Q  V  F  *  I  I  M  C  V  F  V  V  F  Y  C  *  M  L  V  L  V  V  T  I  V  L  L  </first_frame>
            <second_frame>  C  L  F  *  C  W  H  *  F  R  L  G  A  Y  R  S  S  Y  Q  K  L  Y  M  N  L  L  T  L  S  Y  P  N  N  E  N  F  I  Y  V  *  F  A  M  H  G  *  I  V  F  *  L  L  F  N  N  I  N  F  I  L  L  F  I  L  *  L  S  *  *  T  K  I  Q  T  *  L  V  Q  I  Y  F  R  I  D  Q  E  T  M  G  A  G  G  N  M  S  T  P  T  T  K  K  S  H  L  Q  R  V  P  S  S  K  P  P  F  T  L  G  D  V  K  K  A  I  P  P  H  C  F  Q  R  S  L  I  R  S  F  S  Y  L  I  Q  D  L  I  L  V  S  V  F  Y  Y  I  A  N  T  Y  F  H  L  L  P  S  P  L  T  Y  L  A  W  P  A  Y  W  I  A  Q  G  C  V  S  T  G  I  W  V  I  G  H  E  C  G  H  H  G  F  S  D  Y  Q  W  V  D  D  T  V  G  L  I  L  H  S  A  L  L  T  P  Y  F  A  W  K  H  S  H  R  R  H  H  A  N  T  G  S  L  E  N  D  E  V  Y  I  P  R  F  K  S  K  L  R  W  Y  Y  K  Y  L  N  N  P  L  G  R  V  F  V  L  A  F  T  L  T  F  A  W  P  L  Y  L  M  F  N  I  S  G  K  K  Y  E  R  F  A  C  H  Y  D  P  N  S  P  I  Y  S  N  R  E  R  M  Q  I  Y  I  S  D  A  G  V  I  A  A  T  Y  V  L  Y  R  L  A  M  T  Q  G  L  T  W  V  L  C  M  Y  G  V  P  L  L  I  V  N  G  F  I  V  L  I  T  L  M  H  H  T  H  A  S  L  P  H  Y  D  S  S  E  W  D  Y  L  R  G  A  L  A  T  V  D  R  D  Y  G  I  L  N  K  V  F  H  N  V  T  D  T  H  V  L  H  H  I  F  S  Y  I  S  H  Y  H  A  M  E  A  T  N  A  I  K  P  L  L  G  D  Y  Y  Q  V  D  D  T  P  I  L  K  A  M  W  R  D  T  K  E  C  I  Y  V  E  K  D  E  G  S  Q  G  R  G  V  Y  W  Y  K  N  K  L  *  K  *  N  T  K  *  L  V  K  S  F  N  L  I  R  R  C  K  Y  F  E  *  L  C  V  F  L  L  Y  F  I  V  K  C  W  F  *  L  L  L  L  Y  C  * </second_frame>
            <third_frame>   V  S  F  D  V  G  I  N  L  D  *  A  L  I  D  H  P  I  K  N  Y  I  *  I  F  *  H  F  L  I  L  I  M  K  I  L  F  M  F  D  L  P  C  M  V  E  L  Y  S  N  F  C  L  I  I  L  I  S  Y  Y  F  L  Y  Y  N  Y  H  S  K  P  K  S  K  L  N  W  C  R  S  I  L  G  L  I  K  R  P  W  E  L  V  E  I  C  L  L  Q  Q  L  K  K  V  I  S  K  E  F  H  L  R  S  P  L  L  H  L  A  M  *  R  R  P  F  L  L  T  A  S  N  V  L  L  F  D  P  S  L  I  L  F  K  I  S  Y  L  S  P  S  S  I  I  L  P  T  L  T  S  I  S  F  H  L  H  *  L  T  L  P  G  P  L  I  G  S  R  K  V  V  F  P  L  G  Y  G  S  L  D  T  N  V  V  I  M  A  S  V  I  T  N  G  *  M  T  L  L  V  S  S  Y  I  L  H  F  *  H  H  T  L  H  G  S  I  V  I  G  V  I  M  P  T  L  A  P  L  R  M  M  K  C  T  Y  L  G  L  N  P  N  *  D  G  T  T  N  T  *  T  I  H  *  D  E  Y  S  Y  L  P  S  P  S  P  L  P  G  L  Y  T  *  C  S  I  S  Q  A  K  N  M  N  V  L  H  V  T  M  I  Q  I  A  Q  S  I  L  T  A  R  E  C  K  S  T  F  Q  M  Q  V  *  L  Q  L  L  M  Y  Y  T  A  L  L  *  H  K  G  *  L  G  F  C  V  C  T  E  C  L  S  L  S  *  M  D  L  *  C  *  S  L  L  C  T  T  L  M  L  H  C  H  I  M  I  H  R  S  G  I  I  *  E  E  L  *  L  P  *  I  E  T  M  V  Y  *  T  R  C  S  I  M  L  L  I  L  M  S  C  I  I  Y  S  H  T  Y  H  I  T  M  Q  W  R  R  P  T  R  L  S  H  C  *  E  I  I  T  K  L  M  I  P  Q  F  *  R  Q  C  G  G  I  Q  R  S  A  S  M  *  R  R  T  K  D  L  K  E  E  V  F  I  G  I  K  T  S  F  E  S  R  I  P  S  N  W  L  N  L  L  T  *  *  E  D  A  S  I  L  N  N  Y  V  C  F  C  C  I  L  L  L  N  V  G  F  S  C  Y  Y  C  I  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="9263" stop="8088"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1173</number_coding_nucleotides>
                  <number_encoded_amino_acids>391</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVQIYFRIDQETMGAGGNMSTPTTKKSHLQRVPSSKPPFTLGDVKKAIPPHCFQRSLIRSFSYLIQDLILVSVFYYIANTYFHLLPSPLTYLAWPAYWIAQGCVSTGIWVIGHECGHHGFSDYQWVDDTVGLILHSALLTPYFAWKHSHRRHHANTGSLENDEVYIPRFKSKLRWYYKYLNNPLGRVFVLAFTLTFAWPLYLMFNISGKKYERFACHYDPNSPIYSNRERMQIYISDAGVIAATYVLYRLAMTQGLTWVLCMYGVPLLIVNGFIVLITLMHHTHASLPHYDSSEWDYLRGALATVDRDYGILNKVFHNVTDTHVLHHIFSYISHYHAMEATNAIKPLLGDYYQVDDTPILKAMWRDTKECIYVEKDEGSQGRGVYWYKNKL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="33418" PGL_stop="25284"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="33418" e_stop="33348"/>
            <exon e_start="32996" e_stop="32941"/>
            <exon e_start="31284" e_stop="31155"/>
            <exon e_start="30895" e_stop="30784"/>
            <exon e_start="28519" e_stop="28420"/>
            <exon e_start="26121" e_stop="26043"/>
            <exon e_start="25946" e_stop="25775"/>
            <exon e_start="25666" e_stop="25586"/>
            <exon e_start="25456" e_stop="25284"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.864" acc_prob="0.921" e_score="0.986"/>
          <exon-intron don_prob="0.993" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.960" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.890" e_score="0.991"/>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="0.930"/>
          <exon-intron don_prob="1.000" acc_prob="0.468" e_score="0.873"/>
          <exon-intron don_prob="0.882" acc_prob="0.988" e_score="0.907"/>
          <exon-intron don_prob="0.989" acc_prob="0.305" e_score="0.914"/>
          <exon-only e_score="0.798"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="33418" e_stop="33348" e_length="71"/>
          </exon>
          <intron i_serial="1" don_prob="0.864" acc_prob="0.921">
            <gDNA_intron_boundary i_start="33347" i_stop="32997" i_length="351"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="32996" e_stop="32941" e_length="56"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.977">
            <gDNA_intron_boundary i_start="32940" i_stop="31285" i_length="1656"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31284" e_stop="31155" e_length="130"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.960">
            <gDNA_intron_boundary i_start="31154" i_stop="30896" i_length="259"/>
          </intron>
          <exon e_serial="4" e_score="0.991">
            <gDNA_exon_boundary e_start="30895" e_stop="30784" e_length="112"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.890">
            <gDNA_intron_boundary i_start="30783" i_stop="28520" i_length="2264"/>
          </intron>
          <exon e_serial="5" e_score="0.930">
            <gDNA_exon_boundary e_start="28519" e_stop="28420" e_length="100"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="28419" i_stop="26122" i_length="2298"/>
          </intron>
          <exon e_serial="6" e_score="0.873">
            <gDNA_exon_boundary e_start="26121" e_stop="26043" e_length="79"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="0.468">
            <gDNA_intron_boundary i_start="26042" i_stop="25947" i_length="96"/>
          </intron>
          <exon e_serial="7" e_score="0.907">
            <gDNA_exon_boundary e_start="25946" e_stop="25775" e_length="172"/>
          </exon>
          <intron i_serial="7" don_prob="0.882" acc_prob="0.988">
            <gDNA_intron_boundary i_start="25774" i_stop="25667" i_length="108"/>
          </intron>
          <exon e_serial="8" e_score="0.914">
            <gDNA_exon_boundary e_start="25666" e_stop="25586" e_length="81"/>
          </exon>
          <intron i_serial="8" don_prob="0.989" acc_prob="0.305">
            <gDNA_intron_boundary i_start="25585" i_stop="25457" i_length="129"/>
          </intron>
          <exon e_serial="9" e_score="0.798">
            <gDNA_exon_boundary e_start="25456" e_stop="25284" e_length="173"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="33418" stop="33348"/>
              <exon start="32996" stop="32941"/>
              <exon start="31284" stop="31155"/>
              <exon start="30895" stop="30784"/>
              <exon start="28519" stop="28420"/>
              <exon start="26121" stop="26043"/>
              <exon start="25946" stop="25775"/>
              <exon start="25666" stop="25586"/>
              <exon start="25456" stop="25284"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323365" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTCAAGGTTGAAATTTAACTGGGATGAGCAATAACAGGCTAAATGGTCATTAGCTCAGATCAGCTTTTCAG : GTTATAGTCAATCAGTGTTATATCCAGTGCCAGTCAAGGTGATGCCTGCTATGAAG : ACTGCTATTCATGGTGGGATTGGGCACGTATTCAGCAAACTAATAAAGGAGATTGGTGATCCTGTTGACTTTGAACTTCCAGATTGGTTAAATAAATGGCAGTCAATGCCCTATACCTTTATTAAGCGCA : ATATATACCTCACTAAGAAGGTAAAGCGACGTCTGGAAGATGATGGTATATTTTGTTCCTGCAGCTCAACGGCAGAAACTTCTGTTGTGTGTGGCAAGGATTGTCTCTGTGG : CATAATGTTGTCTAGCTGCTCCTCGGGTTGTAAATGTGGGAGTTCTTGTCTGAATAAGCCATTCCATCAACGTCCTGTGAAGAAGATGAAATTAGTGAAG : ACTGAAAAATGTGGCTCTGGAATTGTGGCAGATGAAGATATCAAACGAGGAGACTTTGTTATAGAGTATGTTGGAGAAG : TTATTGATGACAAAACATGTGAAGAGAGGCTTTGGAAAATGAAGCATAGTGGAGAAACAAACTTCTACTTGTGTGAAATCAATCGGGATATGGTGATTGATGCCACTTACAAGGGCAACAAATCCCGATACATTAATCATAGTTGTTGTCCAAATACTGAGATGCAGAAATG : GATGATTGATGGTGAAACAAGAATTGGCATATTTGCAACACGAGACATTAAAAGGGGCGAGCATCTGACCTATGATTACCA : GTTTGTTCAGTTTGGTGCAGATCAAGATTGCCACTGTGGTGCTGTAAGATGTAGGCGAAAGCTGGGCGTTAAACCTAACAAACCAAAACTCCCTGCTTCAGATACCGCATTAAAGATAGTGGCATGTCAGGTGGCTGCCACCTCTCCCAAATTGAAAGCACTTCTATCTACAC</gDNA_template>
            <first_frame> V  K  V  E  I  *  L  G  *  A  I  T  G  *  M  V  I  S  S  D  Q  L  F  R :   L  *  S  I  S  V  I  S  S  A  S  Q  G  D  A  C  Y  E   : D  C  Y  S  W  W  D  W  A  R  I  Q  Q  T  N  K  G  D  W  *  S  C  *  L  *  T  S  R  L  V  K  *  M  A  V  N  A  L  Y  L  Y  *  A  Q :   Y  I  P  H  *  E  G  K  A  T  S  G  R  *  W  Y  I  L  F  L  Q  L  N  G  R  N  F  C  C  V  W  Q  G  L  S  L  W  :  H  N  V  V  *  L  L  L  G  L  *  M  W  E  F  L  S  E  *  A  I  P  S  T  S  C  E  E  D  E  I  S  E   : D  *  K  M  W  L  W  N  C  G  R  *  R  Y  Q  T  R  R  L  C  Y  R  V  C  W  R  S :   Y  *  *  Q  N  M  *  R  E  A  L  E  N  E  A  *  W  R  N  K  L  L  L  V  *  N  Q  S  G  Y  G  D  *  C  H  L  Q  G  Q  Q  I  P  I  H  *  S  *  L  L  S  K  Y  *  D  A  E  M  :  D  D  *  W  *  N  K  N  W  H  I  C  N  T  R  H  *  K  G  R  A  S  D  L  *  L  P  :  V  C  S  V  W  C  R  S  R  L  P  L  W  C  C  K  M  *  A  K  A  G  R  *  T  *  Q  T  K  T  P  C  F  R  Y  R  I  K  D  S  G  M  S  G  G  C  H  L  S  Q  I  E  S  T  S  I  Y   </first_frame>
            <second_frame>  S  R  L  K  F  N  W  D  E  Q  *  Q  A  K  W  S  L  A  Q  I  S  F  S   : G  Y  S  Q  S  V  L  Y  P  V  P  V  K  V  M  P  A  M  K  :  T  A  I  H  G  G  I  G  H  V  F  S  K  L  I  K  E  I  G  D  P  V  D  F  E  L  P  D  W  L  N  K  W  Q  S  M  P  Y  T  F  I  K  R   : N  I  Y  L  T  K  K  V  K  R  R  L  E  D  D  G  I  F  C  S  C  S  S  T  A  E  T  S  V  V  C  G  K  D  C  L  C  G :   I  M  L  S  S  C  S  S  G  C  K  C  G  S  S  C  L  N  K  P  F  H  Q  R  P  V  K  K  M  K  L  V  K  :  T  E  K  C  G  S  G  I  V  A  D  E  D  I  K  R  G  D  F  V  I  E  Y  V  G  E   : V  I  D  D  K  T  C  E  E  R  L  W  K  M  K  H  S  G  E  T  N  F  Y  L  C  E  I  N  R  D  M  V  I  D  A  T  Y  K  G  N  K  S  R  Y  I  N  H  S  C  C  P  N  T  E  M  Q  K  W :   M  I  D  G  E  T  R  I  G  I  F  A  T  R  D  I  K  R  G  E  H  L  T  Y  D  Y  Q :   F  V  Q  F  G  A  D  Q  D  C  H  C  G  A  V  R  C  R  R  K  L  G  V  K  P  N  K  P  K  L  P  A  S  D  T  A  L  K  I  V  A  C  Q  V  A  A  T  S  P  K  L  K  A  L  L  S  T  </second_frame>
            <third_frame>   Q  G  *  N  L  T  G  M  S  N  N  R  L  N  G  H  *  L  R  S  A  F  Q  :  V  I  V  N  Q  C  Y  I  Q  C  Q  S  R  *  C  L  L  *  R :   L  L  F  M  V  G  L  G  T  Y  S  A  N  *  *  R  R  L  V  I  L  L  T  L  N  F  Q  I  G  *  I  N  G  S  Q  C  P  I  P  L  L  S  A  :  I  Y  T  S  L  R  R  *  S  D  V  W  K  M  M  V  Y  F  V  P  A  A  Q  R  Q  K  L  L  L  C  V  A  R  I  V  S  V   : A  *  C  C  L  A  A  P  R  V  V  N  V  G  V  L  V  *  I  S  H  S  I  N  V  L  *  R  R  *  N  *  *  R :   L  K  N  V  A  L  E  L  W  Q  M  K  I  S  N  E  E  T  L  L  *  S  M  L  E  K  :  L  L  M  T  K  H  V  K  R  G  F  G  K  *  S  I  V  E  K  Q  T  S  T  C  V  K  S  I  G  I  W  *  L  M  P  L  T  R  A  T  N  P  D  T  L  I  I  V  V  V  Q  I  L  R  C  R  N   : G  *  L  M  V  K  Q  E  L  A  Y  L  Q  H  E  T  L  K  G  A  S  I  *  P  M  I  T   : S  L  F  S  L  V  Q  I  K  I  A  T  V  V  L  *  D  V  G  E  S  W  A  L  N  L  T  N  Q  N  S  L  L  Q  I  P  H  *  R  *  W  H  V  R  W  L  P  P  L  P  N  *  K  H  F  Y  L  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="33384" stop="33348"/>
                    <exon start="32996" stop="32941"/>
                    <exon start="31284" stop="31155"/>
                    <exon start="30895" stop="30784"/>
                    <exon start="28519" stop="28420"/>
                    <exon start="26121" stop="26043"/>
                    <exon start="25946" stop="25775"/>
                    <exon start="25666" stop="25586"/>
                    <exon start="25456" stop="25285"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>939</number_coding_nucleotides>
                  <number_encoded_amino_acids>313</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QAKWSLAQISFSGYSQSVLYPVPVKVMPAMKTAIHGGIGHVFSKLIKEIGDPVDFELPDWLNKWQSMPYTFIKRNIYLTKKVKRRLEDDGIFCSCSSTAETSVVCGKDCLCGIMLSSCSSGCKCGSSCLNKPFHQRPVKKMKLVKTEKCGSGIVADEDIKRGDFVIEYVGEVIDDKTCEERLWKMKHSGETNFYLCEINRDMVIDATYKGNKSRYINHSCCPNTEMQKWMIDGETRIGIFATRDIKRGEHLTYDYQFVQFGADQDCHCGAVRCRRKLGVKPNKPKLPASDTALKIVACQVAATSPKLKALLST</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="36950" PGL_stop="37666"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36950" e_stop="37666"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.985">
            <gDNA_exon_boundary e_start="36950" e_stop="37666" e_length="717"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36950" stop="37666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315153" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAGGAAGTGTCCCTTGTTTTTATCCACTTATAGTTTATTGTTTTGCCCTTACTTTAAATGGTCAAACTAGCCGTTAACTAGTCGTTGTAGAGTTTTAGGAGCTTTAATAAAGAACTAGTTTAGGTATAATAACCATAAATCATAAGGTTTTTGATGCTAGTTTATACTAGATGAGCTTGTTGAATCCTAGGAGATACGTTTATATGATTGAATATCCTTACAGAAAGTGTCATACACACGCCTTAAGCTAGAAGAATATCCATGATTTCAACAATTAGACGTGATTTTCAACTTGGAATTTTCATTTACACGACTCTCGTCTCTGATGATGATGATCATCAGTTTCACAGAATTTTGTGATAAAGGTATGATTCTGCACCCCAAATGATTTCCTCTCAACTTCAAAAGCCATAATATGTGTCTTACACCAACTCTATCAAACATTCTGCCAATACCTACGGACTGTATATAAAATTTTTCATAATCTTATCACTGTTGTTATGTTGGTCAATTCTAGTGACAATGTATAGATGCACATATTTTGAGTGTTTACTCTGAAGATGTTCTTTTTCTTCATCAAACTCGGCAGGACTCTAACTGATAACATGGTAGTCGGCGTTTCCAAAGGATTCGAGAAGAAACTTCAATTGGTAGGGGTTGGATATCGTGCAACCATCGAAGGGAAAGACATAGTTCTCAATCTCGGATTTTCTCATC</gDNA_template>
            <first_frame> K  E  V  S  L  V  F  I  H  L  *  F  I  V  L  P  L  L  *  M  V  K  L  A  V  N  *  S  L  *  S  F  R  S  F  N  K  E  L  V  *  V  *  *  P  *  I  I  R  F  L  M  L  V  Y  T  R  *  A  C  *  I  L  G  D  T  F  I  *  L  N  I  L  T  E  S  V  I  H  T  P  *  A  R  R  I  S  M  I  S  T  I  R  R  D  F  Q  L  G  I  F  I  Y  T  T  L  V  S  D  D  D  D  H  Q  F  H  R  I  L  *  *  R  Y  D  S  A  P  Q  M  I  S  S  Q  L  Q  K  P  *  Y  V  S  Y  T  N  S  I  K  H  S  A  N  T  Y  G  L  Y  I  K  F  F  I  I  L  S  L  L  L  C  W  S  I  L  V  T  M  Y  R  C  T  Y  F  E  C  L  L  *  R  C  S  F  S  S  S  N  S  A  G  L  *  L  I  T  W  *  S  A  F  P  K  D  S  R  R  N  F  N  W  *  G  L  D  I  V  Q  P  S  K  G  K  T  *  F  S  I  S  D  F  L  I </first_frame>
            <second_frame>  R  K  C  P  L  F  L  S  T  Y  S  L  L  F  C  P  Y  F  K  W  S  N  *  P  L  T  S  R  C  R  V  L  G  A  L  I  K  N  *  F  R  Y  N  N  H  K  S  *  G  F  *  C  *  F  I  L  D  E  L  V  E  S  *  E  I  R  L  Y  D  *  I  S  L  Q  K  V  S  Y  T  R  L  K  L  E  E  Y  P  *  F  Q  Q  L  D  V  I  F  N  L  E  F  S  F  T  R  L  S  S  L  M  M  M  I  I  S  F  T  E  F  C  D  K  G  M  I  L  H  P  K  *  F  P  L  N  F  K  S  H  N  M  C  L  T  P  T  L  S  N  I  L  P  I  P  T  D  C  I  *  N  F  S  *  S  Y  H  C  C  Y  V  G  Q  F  *  *  Q  C  I  D  A  H  I  L  S  V  Y  S  E  D  V  L  F  L  H  Q  T  R  Q  D  S  N  *  *  H  G  S  R  R  F  Q  R  I  R  E  E  T  S  I  G  R  G  W  I  S  C  N  H  R  R  E  R  H  S  S  Q  S  R  I  F  S   </second_frame>
            <third_frame>   G  S  V  P  C  F  Y  P  L  I  V  Y  C  F  A  L  T  L  N  G  Q  T  S  R  *  L  V  V  V  E  F  *  E  L  *  *  R  T  S  L  G  I  I  T  I  N  H  K  V  F  D  A  S  L  Y  *  M  S  L  L  N  P  R  R  Y  V  Y  M  I  E  Y  P  Y  R  K  C  H  T  H  A  L  S  *  K  N  I  H  D  F  N  N  *  T  *  F  S  T  W  N  F  H  L  H  D  S  R  L  *  *  *  *  S  S  V  S  Q  N  F  V  I  K  V  *  F  C  T  P  N  D  F  L  S  T  S  K  A  I  I  C  V  L  H  Q  L  Y  Q  T  F  C  Q  Y  L  R  T  V  Y  K  I  F  H  N  L  I  T  V  V  M  L  V  N  S  S  D  N  V  *  M  H  I  F  *  V  F  T  L  K  M  F  F  F  F  I  K  L  G  R  T  L  T  D  N  M  V  V  G  V  S  K  G  F  E  K  K  L  Q  L  V  G  V  G  Y  R  A  T  I  E  G  K  D  I  V  L  N  L  G  F  S  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0004A15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="42228" PGL_stop="64745"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57106" e_stop="57489"/>
            <exon e_start="57599" e_stop="57872"/>
            <exon e_start="59228" e_stop="59636"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.902" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="57106" e_stop="57489" e_length="384"/>
          </exon>
          <intron i_serial="1" don_prob="0.902" acc_prob="0.996">
            <gDNA_intron_boundary i_start="57490" i_stop="57598" i_length="109"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="57599" e_stop="57872" e_length="274"/>
          </exon>
          <intron i_serial="2" don_prob="0.986" acc_prob="0.984">
            <gDNA_intron_boundary i_start="57873" i_stop="59227" i_length="1355"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="59228" e_stop="59636" e_length="409"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57106" stop="57489"/>
              <exon start="57599" stop="57774"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332056" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57708" stop="57872"/>
              <exon start="59228" stop="59636"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344301" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGACTGCGTCCATGATTGCCAGGTGGCAGGATGTTGGTTTCACACATGGAGTCATGAACACTGATAATATGAGCGTGTTAGGACTCACTATTGACTATGGTCCCTTTGGCTTTTTAGATTCTTTTGATCCCAGTTACACACCAAATACCACTGATCTTCCTGGCAGAAGATATTGTTTTGCAAATCAGCCAGATGTAGGTTTATGGAATATTGCGCAGTTTACCTCTGCTCTATCTACTGCCGAGTTGCTTAGTGATAAAGAGGCAGATTATGCTATGGAAAG : ATATGGTAACAAATTCATGGATGATTATCAAGATATCATGACCAGGAAACTTGGTCTGACAAAGTACAATAAAAAGTTGATTGGTGAACTACTCAAGAATATGGTCTCCGATAAAGTTGATTACACAAATTTCTTTCGATCTCTATCAAACATCAAAGCTGATCCTGCAATTCCAGAGGACCAATTATTGATTCCTCTCAAAGATGTTCTCTTAGATATTGGTATGGAACGCAGGGAAGCCTGGACTAACTGGATAAAGTCATATATACAAGAG : CTCTCCACAACTGGTGTATTAGATGAGGAGAGGAAAGTTTCAATGAATTTTGTAAATCCAAAGTACATCCTCAGAAACTATCTATGCCAGAATGCCATTGATGCAGCAGAACAAGGCGATTTTGAGGAGGTTCGGCAGTTATTGAAGGTTATGCAATGTCCATTTGATGAACAGCCTGGTATGGAGAAATATGCACGCTTGCCTCCAGCTTGGGCTCATCGTCCGGGTGTATGCATGCTTTCTTGTTCCTCATAAGGTTTCCGGGTGTATGCTTATGCTTTCTTGTTCCTCATAATATCTCCACTATGTAATACCAGAGTTTCACTTGTATATATATAACTAGTCTCCCGGCACGTGCGTTGCACGTGTATTCCAAATAAAAATCAATAAAAAAAATAAATGAAAAAGT</gDNA_template>
            <first_frame> F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  *  D  C  V  H  D  C  Q  V  A  G  C  W  F  H  T  W  S  H  E  H  *  *  Y  E  R  V  R  T  H  Y  *  L  W  S  L  W  L  F  R  F  F  *  S  Q  L  H  T  K  Y  H  *  S  S  W  Q  K  I  L  F  C  K  S  A  R  C  R  F  M  E  Y  C  A  V  Y  L  C  S  I  Y  C  R  V  A  *  *  *  R  G  R  L  C  Y  G  K  :  I  W  *  Q  I  H  G  *  L  S  R  Y  H  D  Q  E  T  W  S  D  K  V  Q  *  K  V  D  W  *  T  T  Q  E  Y  G  L  R  *  S  *  L  H  K  F  L  S  I  S  I  K  H  Q  S  *  S  C  N  S  R  G  P  I  I  D  S  S  Q  R  C  S  L  R  Y  W  Y  G  T  Q  G  S  L  D  *  L  D  K  V  I  Y  T  R   : A  L  H  N  W  C  I  R  *  G  E  E  S  F  N  E  F  C  K  S  K  V  H  P  Q  K  L  S  M  P  E  C  H  *  C  S  R  T  R  R  F  *  G  G  S  A  V  I  E  G  Y  A  M  S  I  *  *  T  A  W  Y  G  E  I  C  T  L  A  S  S  L  G  S  S  S  G  C  M  H  A  F  L  F  L  I  R  F  P  G  V  C  L  C  F  L  V  P  H  N  I  S  T  M  *  Y  Q  S  F  T  C  I  Y  I  T  S  L  P  A  R  A  L  H  V  Y  S  K  *  K  S  I  K  K  I  N  E  K   </first_frame>
            <second_frame>  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  R  T  A  S  M  I  A  R  W  Q  D  V  G  F  T  H  G  V  M  N  T  D  N  M  S  V  L  G  L  T  I  D  Y  G  P  F  G  F  L  D  S  F  D  P  S  Y  T  P  N  T  T  D  L  P  G  R  R  Y  C  F  A  N  Q  P  D  V  G  L  W  N  I  A  Q  F  T  S  A  L  S  T  A  E  L  L  S  D  K  E  A  D  Y  A  M  E  R :   Y  G  N  K  F  M  D  D  Y  Q  D  I  M  T  R  K  L  G  L  T  K  Y  N  K  K  L  I  G  E  L  L  K  N  M  V  S  D  K  V  D  Y  T  N  F  F  R  S  L  S  N  I  K  A  D  P  A  I  P  E  D  Q  L  L  I  P  L  K  D  V  L  L  D  I  G  M  E  R  R  E  A  W  T  N  W  I  K  S  Y  I  Q  E  :  L  S  T  T  G  V  L  D  E  E  R  K  V  S  M  N  F  V  N  P  K  Y  I  L  R  N  Y  L  C  Q  N  A  I  D  A  A  E  Q  G  D  F  E  E  V  R  Q  L  L  K  V  M  Q  C  P  F  D  E  Q  P  G  M  E  K  Y  A  R  L  P  P  A  W  A  H  R  P  G  V  C  M  L  S  C  S  S  *  G  F  R  V  Y  A  Y  A  F  L  F  L  I  I  S  P  L  C  N  T  R  V  S  L  V  Y  I  *  L  V  S  R  H  V  R  C  T  C  I  P  N  K  N  Q  *  K  K  *  M  K  K  </second_frame>
            <third_frame>   F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  F  L  G  L  R  P  *  L  P  G  G  R  M  L  V  S  H  M  E  S  *  T  L  I  I  *  A  C  *  D  S  L  L  T  M  V  P  L  A  F  *  I  L  L  I  P  V  T  H  Q  I  P  L  I  F  L  A  E  D  I  V  L  Q  I  S  Q  M  *  V  Y  G  I  L  R  S  L  P  L  L  Y  L  L  P  S  C  L  V  I  K  R  Q  I  M  L  W  K   : D  M  V  T  N  S  W  M  I  I  K  I  S  *  P  G  N  L  V  *  Q  S  T  I  K  S  *  L  V  N  Y  S  R  I  W  S  P  I  K  L  I  T  Q  I  S  F  D  L  Y  Q  T  S  K  L  I  L  Q  F  Q  R  T  N  Y  *  F  L  S  K  M  F  S  *  I  L  V  W  N  A  G  K  P  G  L  T  G  *  S  H  I  Y  K  S :   S  P  Q  L  V  Y  *  M  R  R  G  K  F  Q  *  I  L  *  I  Q  S  T  S  S  E  T  I  Y  A  R  M  P  L  M  Q  Q  N  K  A  I  L  R  R  F  G  S  Y  *  R  L  C  N  V  H  L  M  N  S  L  V  W  R  N  M  H  A  C  L  Q  L  G  L  I  V  R  V  Y  A  C  F  L  V  P  H  K  V  S  G  C  M  L  M  L  S  C  S  S  *  Y  L  H  Y  V  I  P  E  F  H  L  Y  I  Y  N  *  S  P  G  T  C  V  A  R  V  F  Q  I  K  I  N  K  K  N  K  *  K  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57107" stop="57489"/>
                    <exon start="57599" stop="57872"/>
                    <exon start="59228" stop="59482"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>909</number_coding_nucleotides>
                  <number_encoded_amino_acids>303</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFFRTASMIARWQDVGFTHGVMNTDNMSVLGLTIDYGPFGFLDSFDPSYTPNTTDLPGRRYCFANQPDVGLWNIAQFTSALSTAELLSDKEADYAMERYGNKFMDDYQDIMTRKLGLTKYNKKLIGELLKNMVSDKVDYTNFFRSLSNIKADPAIPEDQLLIPLKDVLLDIGMERREAWTNWIKSYIQELSTTGVLDEERKVSMNFVNPKYILRNYLCQNAIDAAEQGDFEEVRQLLKVMQCPFDEQPGMEKYARLPPAWAHRPGVCMLSCSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="42228" e_stop="42612"/>
            <exon e_start="43134" e_stop="43254"/>
            <exon e_start="43343" e_stop="43516"/>
            <exon e_start="43659" e_stop="43818"/>
            <exon e_start="44161" e_stop="44237"/>
            <exon e_start="44299" e_stop="44352"/>
            <exon e_start="44449" e_stop="44841"/>
            <exon e_start="44924" e_stop="45205"/>
            <exon e_start="45302" e_stop="45618"/>
            <exon e_start="45714" e_stop="45878"/>
            <exon e_start="64036" e_stop="64296"/>
            <exon e_start="64373" e_stop="64548"/>
            <exon e_start="64617" e_stop="64745"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.994" e_score="0.995"/>
          <exon-intron don_prob="0.911" acc_prob="0.992" e_score="0.992"/>
          <exon-intron don_prob="0.950" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="0.988"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="0.987"/>
          <exon-intron don_prob="0.957" acc_prob="0.992" e_score="0.981"/>
          <exon-intron don_prob="0.964" acc_prob="0.998" e_score="0.990"/>
          <exon-intron don_prob="0.785" acc_prob="0.915" e_score="1.000"/>
          <exon-intron don_prob="0.635" acc_prob="0.878" e_score="0.991"/>
          <exon-intron don_prob="0.882" acc_prob="0.889" e_score="0.891"/>
          <exon-intron don_prob="0.987" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.995" e_score="0.938"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.995">
            <gDNA_exon_boundary e_start="42228" e_stop="42612" e_length="385"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.994">
            <gDNA_intron_boundary i_start="42613" i_stop="43133" i_length="521"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="43134" e_stop="43254" e_length="121"/>
          </exon>
          <intron i_serial="2" don_prob="0.911" acc_prob="0.992">
            <gDNA_intron_boundary i_start="43255" i_stop="43342" i_length="88"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="43343" e_stop="43516" e_length="174"/>
          </exon>
          <intron i_serial="3" don_prob="0.950" acc_prob="1.000">
            <gDNA_intron_boundary i_start="43517" i_stop="43658" i_length="142"/>
          </intron>
          <exon e_serial="4" e_score="0.988">
            <gDNA_exon_boundary e_start="43659" e_stop="43818" e_length="160"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="43819" i_stop="44160" i_length="342"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="44161" e_stop="44237" e_length="77"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="44238" i_stop="44298" i_length="61"/>
          </intron>
          <exon e_serial="6" e_score="0.981">
            <gDNA_exon_boundary e_start="44299" e_stop="44352" e_length="54"/>
          </exon>
          <intron i_serial="6" don_prob="0.957" acc_prob="0.992">
            <gDNA_intron_boundary i_start="44353" i_stop="44448" i_length="96"/>
          </intron>
          <exon e_serial="7" e_score="0.990">
            <gDNA_exon_boundary e_start="44449" e_stop="44841" e_length="393"/>
          </exon>
          <intron i_serial="7" don_prob="0.964" acc_prob="0.998">
            <gDNA_intron_boundary i_start="44842" i_stop="44923" i_length="82"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="44924" e_stop="45205" e_length="282"/>
          </exon>
          <intron i_serial="8" don_prob="0.785" acc_prob="0.915">
            <gDNA_intron_boundary i_start="45206" i_stop="45301" i_length="96"/>
          </intron>
          <exon e_serial="9" e_score="0.991">
            <gDNA_exon_boundary e_start="45302" e_stop="45618" e_length="317"/>
          </exon>
          <intron i_serial="9" don_prob="0.635" acc_prob="0.878">
            <gDNA_intron_boundary i_start="45619" i_stop="45713" i_length="95"/>
          </intron>
          <exon e_serial="10" e_score="0.891">
            <gDNA_exon_boundary e_start="45714" e_stop="45878" e_length="165"/>
          </exon>
          <intron i_serial="10" don_prob="0.882" acc_prob="0.889">
            <gDNA_intron_boundary i_start="45879" i_stop="64035" i_length="18157"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="64036" e_stop="64296" e_length="261"/>
          </exon>
          <intron i_serial="11" don_prob="0.987" acc_prob="0.997">
            <gDNA_intron_boundary i_start="64297" i_stop="64372" i_length="76"/>
          </intron>
          <exon e_serial="12" e_score="0.938">
            <gDNA_exon_boundary e_start="64373" e_stop="64548" e_length="176"/>
          </exon>
          <intron i_serial="12" don_prob="0.990" acc_prob="0.995">
            <gDNA_intron_boundary i_start="64549" i_stop="64616" i_length="68"/>
          </intron>
          <exon e_serial="13" e_score="0.977">
            <gDNA_exon_boundary e_start="64617" e_stop="64745" e_length="129"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42228" stop="42612"/>
              <exon start="43134" stop="43254"/>
              <exon start="43343" stop="43516"/>
              <exon start="43659" stop="43818"/>
              <exon start="44161" stop="44237"/>
              <exon start="44299" stop="44352"/>
              <exon start="44449" stop="44841"/>
              <exon start="44924" stop="45205"/>
              <exon start="45302" stop="45618"/>
              <exon start="45714" stop="45878"/>
              <exon start="64036" stop="64176"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328575" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64171" stop="64296"/>
              <exon start="64373" stop="64548"/>
              <exon start="64617" stop="64745"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345232" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGGTTCAAAATGGAGCTAACTAATTCAAGAGGTACTAGTTTAAGAGAAAAAATAATCAGGGGAAGTAGTTTGAGAGGGAGCTTAAGTAGAAAGAGGAATAGTACTAATAACTCCAGGTGGAATGGCAATGATGGGGAGATTTTTAATCGTTCAACGAGAGACGAAGATGATGAAGAGGCTCTTAAATGGGCAGCTCTTGAAAAGCTTCCAACGTTTGATCGTTTGAGAAAAGGTCTCTTGTTTGGATCACAAGGTGCATCTGCTGAAATTGATATACATGATATTGGTTTTCAAGAAAGAAACAAGTTGCTTGAAAGGCTTGTCAAAGTTGCAGATGAGGATAATGAGAAGCTCCTGTTGAAACTCAAGCAAAGAATTGACAG : AGTTGGGATAGATTTGCCAGAAATAGAAGTAAGATATGAGCATTTAACTATTGAGGCAGATGCATATGTAGGAAGTAGAGCTTTGCCTACATTTATCAACTTTATCTCTAATTTTTTTGAG : GATATATTGAACTCTGTCCATATCCTACCGAGTCGAAAGAGGAAACTAACTATTCTTAATGATGTGAGTGGTATCATTAAGCCTCGCAGATTGACTTTGCTTTTAGGACCTCCAAGTTCCGGGAAAACTACATTATTATTAGCTTTGGCCGGAAAGCTCGACTCTGCCCTTAAG : GTTACTGGAAAAGTGACGTATAATGGACATGAAATGAATGAGTTTGTGCCGCAAAGAACAGCGGCTTATATTAGCCAGTATGATTTACATATTGGAGAAATGACTGTGAGAGAAACCTTGGAATTCTCCGCCAGATGCCAGGGAGTTGGATCGAGTTATG : AGCTGTTGGTTGAACTGTCAAGAAGAGAGAAAGCAGCTAAAATCAAGCCAGATCCTGATATTGATATTTTCATGAAG : GCATTAGCAACAGAGGGACAAGAAGCAGTTTTTGTTACAGATTATGTTCTGAAG : CTTTTGGGGCTGGATATTTGTGCAGATACTATGGTGGGAGATGAAATGATTAGGGGTATTTCAGGAGGACAAAAGAAGCGTGTGACAACCGGTGAAATGCTCGTTGGACCGTCCAAGGCACTTTTCATGGATGAAATCTCAACTGGATTGGATAGTTCTACTACTTACTCAATTGTGAACTCACTAAGACAATCTGTGCAAATCTTGCACGGAACTGCTGTGATATCTCTCTTGCAGCCAGCACCCGAGACGTACAACTTGTTCGACGACATTATTCTGTTATCAGATGAGAAAATTGTCTATCAGGGACCTCGAGAGGATGTCCTTGGCTTCTTCGAGTCCATGGGGTTCAAATGTCCAGATAGAAAAGGCGTGGCCGACTTCTTGCAAGAA : GTGACTTCAAAGAAAGATCAACAGCAATATTGGGTGAGGAGGGATGAAACTTACCGGTTTATCACTTCAAAAGAATTTGCTGAGGCACATCAATCGTTCCATGTTGGGAGGAAACTCGCGGATAAGCTTGCAGCTTCATATGACAAGAGCAAAAGCCATCCTGCTGCTTTGTCAACTCAAAAGTATGGTATAGGGAAGAAACAACTCTTAAAGGTCTGCACTGAACGAGAACTCTTACTAATGAAGAGGAACTCATTTGTTTACATCTTCAAGTTCATTCAG : CTTACAATTGTGGCACTCATATCAATGACTCTCTTTTTCCGTACTAAGATGCCGCGTGATACAATTGAAGATGGAGTAAAATATGTTGGTGCCCTCTTTTTGGTTGTCACTCAGATTATGTTTAACGGAATGGCTGAGATCGCCCTGACAATTTACAAACTTCCTGTCTTCTACAAGCAAAGGGACCTTCTCTTTTACCCTTCATGGGCTTATGCAGTGCCCACATGGATACTCAAAATGCCTATAACATTTGCTGAAGTTGGACTTTGGGTGTTCCTCACTTACTATGTCATAGGATTTGATCCGAGCGCTGCAAG : ATTTTTCAAACAGTTTTTGCTACTTCTATCACAAAACCAGATGGGCATCAGCATTGTTTCGCTTCATTGGGGCAGCGGGAAGGACCATGGGAAGTTGCTAATCCATTTGGAACCTTTGTTCTGCTTTTGCAGTTTGCATTGGGTGGGTTTCTTTCTCTTCCCAAG : TTGATGTGAAGAAATGGTGGTTATGGGGTTACTGGTCATCACCGATGATGTATGCTATGAATTCAATTCTTGTGAATGAATTTGATGGAAAAAAGTGGAAACAAATTGCACCAAATGGAACTGATTCACTTGGAGTTACAGTTGTAAGATCTCGAGGGTTCTTCACAAATGCATACTGGTACTGGATAGGCGTTGGTGCACAAATTGGTTTCACAATCGTCTTTAACATCTGCTACAGTATTGCACTCGCTTATCTCAACC : CATTTGGTAAGCCGCAAGGTATGATATCAGAAGACAGCAATGATGCCAAAACAACGAGCACTGAGAAAGAAGTGTCCACTAGTGAGGGCCAGAATAAGAAAAAGGGAATGGTTCTTCCATTTGAACCGCATTCTATAACCTTCGATGAAGTTACATACTCTGTTGACATGCCTCAG : GAAATGAAAAATCAAGGTGTCACTGAAGATAGATTGGTACTTCTGAATGGTGTATCTGGAGCTTTCAGGCCCGGTGTTTTGACAGCATTGATGGGAGTTAGTGGCGCTGGAAAAACAACGTTAATGGAT</gDNA_template>
            <first_frame> F  G  S  K  W  S  *  L  I  Q  E  V  L  V  *  E  K  K  *  S  G  E  V  V  *  E  G  A  *  V  E  R  G  I  V  L  I  T  P  G  G  M  A  M  M  G  R  F  L  I  V  Q  R  E  T  K  M  M  K  R  L  L  N  G  Q  L  L  K  S  F  Q  R  L  I  V  *  E  K  V  S  C  L  D  H  K  V  H  L  L  K  L  I  Y  M  I  L  V  F  K  K  E  T  S  C  L  K  G  L  S  K  L  Q  M  R  I  M  R  S  S  C  *  N  S  S  K  E  L  T   : E  L  G  *  I  C  Q  K  *  K  *  D  M  S  I  *  L  L  R  Q  M  H  M  *  E  V  E  L  C  L  H  L  S  T  L  S  L  I  F  L  R :   I  Y  *  T  L  S  I  S  Y  R  V  E  R  G  N  *  L  F  L  M  M  *  V  V  S  L  S  L  A  D  *  L  C  F  *  D  L  Q  V  P  G  K  L  H  Y  Y  *  L  W  P  E  S  S  T  L  P  L  R :   L  L  E  K  *  R  I  M  D  M  K  *  M  S  L  C  R  K  E  Q  R  L  I  L  A  S  M  I  Y  I  L  E  K  *  L  *  E  K  P  W  N  S  P  P  D  A  R  E  L  D  R  V  M  :  S  C  W  L  N  C  Q  E  E  R  K  Q  L  K  S  S  Q  I  L  I  L  I  F  S  *  R :   H  *  Q  Q  R  D  K  K  Q  F  L  L  Q  I  M  F  *  S :   F  W  G  W  I  F  V  Q  I  L  W  W  E  M  K  *  L  G  V  F  Q  E  D  K  R  S  V  *  Q  P  V  K  C  S  L  D  R  P  R  H  F  S  W  M  K  S  Q  L  D  W  I  V  L  L  L  T  Q  L  *  T  H  *  D  N  L  C  K  S  C  T  E  L  L  *  Y  L  S  C  S  Q  H  P  R  R  T  T  C  S  T  T  L  F  C  Y  Q  M  R  K  L  S  I  R  D  L  E  R  M  S  L  A  S  S  S  P  W  G  S  N  V  Q  I  E  K  A  W  P  T  S  C  K  K :   *  L  Q  R  K  I  N  S  N  I  G  *  G  G  M  K  L  T  G  L  S  L  Q  K  N  L  L  R  H  I  N  R  S  M  L  G  G  N  S  R  I  S  L  Q  L  H  M  T  R  A  K  A  I  L  L  L  C  Q  L  K  S  M  V  *  G  R  N  N  S  *  R  S  A  L  N  E  N  S  Y  *  *  R  G  T  H  L  F  T  S  S  S  S  F  S :   L  Q  L  W  H  S  Y  Q  *  L  S  F  S  V  L  R  C  R  V  I  Q  L  K  M  E  *  N  M  L  V  P  S  F  W  L  S  L  R  L  C  L  T  E  W  L  R  S  P  *  Q  F  T  N  F  L  S  S  T  S  K  G  T  F  S  F  T  L  H  G  L  M  Q  C  P  H  G  Y  S  K  C  L  *  H  L  L  K  L  D  F  G  C  S  S  L  T  M  S  *  D  L  I  R  A  L  Q   : D  F  S  N  S  F  C  Y  F  Y  H  K  T  R  W  A  S  A  L  F  R  F  I  G  A  A  G  R  T  M  G  S  C  *  S  I  W  N  L  C  S  A  F  A  V  C  I  G  W  V  S  F  S  S  Q   : V  D  V  K  K  W  W  L  W  G  Y  W  S  S  P  M  M  Y  A  M  N  S  I  L  V  N  E  F  D  G  K  K  W  K  Q  I  A  P  N  G  T  D  S  L  G  V  T  V  V  R  S  R  G  F  F  T  N  A  Y  W  Y  W  I  G  V  G  A  Q  I  G  F  T  I  V  F  N  I  C  Y  S  I  A  L  A  Y  L  N   : P  F  G  K  P  Q  G  M  I  S  E  D  S  N  D  A  K  T  T  S  T  E  K  E  V  S  T  S  E  G  Q  N  K  K  K  G  M  V  L  P  F  E  P  H  S  I  T  F  D  E  V  T  Y  S  V  D  M  P  Q  :  E  M  K  N  Q  G  V  T  E  D  R  L  V  L  L  N  G  V  S  G  A  F  R  P  G  V  L  T  A  L  M  G  V  S  G  A  G  K  T  T  L  M  D </first_frame>
            <second_frame>  L  V  Q  N  G  A  N  *  F  K  R  Y  *  F  K  R  K  N  N  Q  G  K  *  F  E  R  E  L  K  *  K  E  E  *  Y  *  *  L  Q  V  E  W  Q  *  W  G  D  F  *  S  F  N  E  R  R  R  *  *  R  G  S  *  M  G  S  S  *  K  A  S  N  V  *  S  F  E  K  R  S  L  V  W  I  T  R  C  I  C  *  N  *  Y  T  *  Y  W  F  S  R  K  K  Q  V  A  *  K  A  C  Q  S  C  R  *  G  *  *  E  A  P  V  E  T  Q  A  K  N  *  Q  :  S  W  D  R  F  A  R  N  R  S  K  I  *  A  F  N  Y  *  G  R  C  I  C  R  K  *  S  F  A  Y  I  Y  Q  L  Y  L  *  F  F  *   : G  Y  I  E  L  C  P  Y  P  T  E  S  K  E  E  T  N  Y  S  *  *  C  E  W  Y  H  *  A  S  Q  I  D  F  A  F  R  T  S  K  F  R  E  N  Y  I  I  I  S  F  G  R  K  A  R  L  C  P  *   : G  Y  W  K  S  D  V  *  W  T  *  N  E  *  V  C  A  A  K  N  S  G  L  Y  *  P  V  *  F  T  Y  W  R  N  D  C  E  R  N  L  G  I  L  R  Q  M  P  G  S  W  I  E  L  * :   A  V  G  *  T  V  K  K  R  E  S  S  *  N  Q  A  R  S  *  Y  *  Y  F  H  E   : G  I  S  N  R  G  T  R  S  S  F  C  Y  R  L  C  S  E   : A  F  G  A  G  Y  L  C  R  Y  Y  G  G  R  *  N  D  *  G  Y  F  R  R  T  K  E  A  C  D  N  R  *  N  A  R  W  T  V  Q  G  T  F  H  G  *  N  L  N  W  I  G  *  F  Y  Y  L  L  N  C  E  L  T  K  T  I  C  A  N  L  A  R  N  C  C  D  I  S  L  A  A  S  T  R  D  V  Q  L  V  R  R  H  Y  S  V  I  R  *  E  N  C  L  S  G  T  S  R  G  C  P  W  L  L  R  V  H  G  V  Q  M  S  R  *  K  R  R  G  R  L  L  A  R   : S  D  F  K  E  R  S  T  A  I  L  G  E  E  G  *  N  L  P  V  Y  H  F  K  R  I  C  *  G  T  S  I  V  P  C  W  E  E  T  R  G  *  A  C  S  F  I  *  Q  E  Q  K  P  S  C  C  F  V  N  S  K  V  W  Y  R  E  E  T  T  L  K  G  L  H  *  T  R  T  L  T  N  E  E  E  L  I  C  L  H  L  Q  V  H  S   : A  Y  N  C  G  T  H  I  N  D  S  L  F  P  Y  *  D  A  A  *  Y  N  *  R  W  S  K  I  C  W  C  P  L  F  G  C  H  S  D  Y  V  *  R  N  G  *  D  R  P  D  N  L  Q  T  S  C  L  L  Q  A  K  G  P  S  L  L  P  F  M  G  L  C  S  A  H  M  D  T  Q  N  A  Y  N  I  C  *  S  W  T  L  G  V  P  H  L  L  C  H  R  I  *  S  E  R  C  K  :  I  F  Q  T  V  F  A  T  S  I  T  K  P  D  G  H  Q  H  C  F  A  S  L  G  Q  R  E  G  P  W  E  V  A  N  P  F  G  T  F  V  L  L  L  Q  F  A  L  G  G  F  L  S  L  P  K  :  L  M  *  R  N  G  G  Y  G  V  T  G  H  H  R  *  C  M  L  *  I  Q  F  L  *  M  N  L  M  E  K  S  G  N  K  L  H  Q  M  E  L  I  H  L  E  L  Q  L  *  D  L  E  G  S  S  Q  M  H  T  G  T  G  *  A  L  V  H  K  L  V  S  Q  S  S  L  T  S  A  T  V  L  H  S  L  I  S  T  :  H  L  V  S  R  K  V  *  Y  Q  K  T  A  M  M  P  K  Q  R  A  L  R  K  K  C  P  L  V  R  A  R  I  R  K  R  E  W  F  F  H  L  N  R  I  L  *  P  S  M  K  L  H  T  L  L  T  C  L  R :   K  *  K  I  K  V  S  L  K  I  D  W  Y  F  *  M  V  Y  L  E  L  S  G  P  V  F  *  Q  H  *  W  E  L  V  A  L  E  K  Q  R  *  W   </second_frame>
            <third_frame>   W  F  K  M  E  L  T  N  S  R  G  T  S  L  R  E  K  I  I  R  G  S  S  L  R  G  S  L  S  R  K  R  N  S  T  N  N  S  R  W  N  G  N  D  G  E  I  F  N  R  S  T  R  D  E  D  D  E  E  A  L  K  W  A  A  L  E  K  L  P  T  F  D  R  L  R  K  G  L  L  F  G  S  Q  G  A  S  A  E  I  D  I  H  D  I  G  F  Q  E  R  N  K  L  L  E  R  L  V  K  V  A  D  E  D  N  E  K  L  L  L  K  L  K  Q  R  I  D  R :   V  G  I  D  L  P  E  I  E  V  R  Y  E  H  L  T  I  E  A  D  A  Y  V  G  S  R  A  L  P  T  F  I  N  F  I  S  N  F  F  E  :  D  I  L  N  S  V  H  I  L  P  S  R  K  R  K  L  T  I  L  N  D  V  S  G  I  I  K  P  R  R  L  T  L  L  L  G  P  P  S  S  G  K  T  T  L  L  L  A  L  A  G  K  L  D  S  A  L  K  :  V  T  G  K  V  T  Y  N  G  H  E  M  N  E  F  V  P  Q  R  T  A  A  Y  I  S  Q  Y  D  L  H  I  G  E  M  T  V  R  E  T  L  E  F  S  A  R  C  Q  G  V  G  S  S  Y   : E  L  L  V  E  L  S  R  R  E  K  A  A  K  I  K  P  D  P  D  I  D  I  F  M  K  :  A  L  A  T  E  G  Q  E  A  V  F  V  T  D  Y  V  L  K  :  L  L  G  L  D  I  C  A  D  T  M  V  G  D  E  M  I  R  G  I  S  G  G  Q  K  K  R  V  T  T  G  E  M  L  V  G  P  S  K  A  L  F  M  D  E  I  S  T  G  L  D  S  S  T  T  Y  S  I  V  N  S  L  R  Q  S  V  Q  I  L  H  G  T  A  V  I  S  L  L  Q  P  A  P  E  T  Y  N  L  F  D  D  I  I  L  L  S  D  E  K  I  V  Y  Q  G  P  R  E  D  V  L  G  F  F  E  S  M  G  F  K  C  P  D  R  K  G  V  A  D  F  L  Q  E  :  V  T  S  K  K  D  Q  Q  Q  Y  W  V  R  R  D  E  T  Y  R  F  I  T  S  K  E  F  A  E  A  H  Q  S  F  H  V  G  R  K  L  A  D  K  L  A  A  S  Y  D  K  S  K  S  H  P  A  A  L  S  T  Q  K  Y  G  I  G  K  K  Q  L  L  K  V  C  T  E  R  E  L  L  L  M  K  R  N  S  F  V  Y  I  F  K  F  I  Q  :  L  T  I  V  A  L  I  S  M  T  L  F  F  R  T  K  M  P  R  D  T  I  E  D  G  V  K  Y  V  G  A  L  F  L  V  V  T  Q  I  M  F  N  G  M  A  E  I  A  L  T  I  Y  K  L  P  V  F  Y  K  Q  R  D  L  L  F  Y  P  S  W  A  Y  A  V  P  T  W  I  L  K  M  P  I  T  F  A  E  V  G  L  W  V  F  L  T  Y  Y  V  I  G  F  D  P  S  A  A  R :   F  F  K  Q  F  L  L  L  L  S  Q  N  Q  M  G  I  S  I  V  S  L  H  W  G  S  G  K  D  H  G  K  L  L  I  H  L  E  P  L  F  C  F  C  S  L  H  W  V  G  F  F  L  F  P  S :   *  C  E  E  M  V  V  M  G  L  L  V  I  T  D  D  V  C  Y  E  F  N  S  C  E  *  I  *  W  K  K  V  E  T  N  C  T  K  W  N  *  F  T  W  S  Y  S  C  K  I  S  R  V  L  H  K  C  I  L  V  L  D  R  R  W  C  T  N  W  F  H  N  R  L  *  H  L  L  Q  Y  C  T  R  L  S  Q  P :   I  W  *  A  A  R  Y  D  I  R  R  Q  Q  *  C  Q  N  N  E  H  *  E  R  S  V  H  *  *  G  P  E  *  E  K  G  N  G  S  S  I  *  T  A  F  Y  N  L  R  *  S  Y  I  L  C  *  H  A  S   : G  N  E  K  S  R  C  H  *  R  *  I  G  T  S  E  W  C  I  W  S  F  Q  A  R  C  F  D  S  I  D  G  S  *  W  R  W  K  N  N  V  N  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42230" stop="42612"/>
                    <exon start="43134" stop="43254"/>
                    <exon start="43343" stop="43516"/>
                    <exon start="43659" stop="43818"/>
                    <exon start="44161" stop="44237"/>
                    <exon start="44299" stop="44352"/>
                    <exon start="44449" stop="44841"/>
                    <exon start="44924" stop="45205"/>
                    <exon start="45302" stop="45618"/>
                    <exon start="45714" stop="45878"/>
                    <exon start="64036" stop="64039"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>2127</number_coding_nucleotides>
                  <number_encoded_amino_acids>709</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WFKMELTNSRGTSLREKIIRGSSLRGSLSRKRNSTNNSRWNGNDGEIFNRSTRDEDDEEALKWAALEKLPTFDRLRKGLLFGSQGASAEIDIHDIGFQERNKLLERLVKVADEDNEKLLLKLKQRIDRVGIDLPEIEVRYEHLTIEADAYVGSRALPTFINFISNFFEDILNSVHILPSRKRKLTILNDVSGIIKPRRLTLLLGPPSSGKTTLLLALAGKLDSALKVTGKVTYNGHEMNEFVPQRTAAYISQYDLHIGEMTVRETLEFSARCQGVGSSYELLVELSRREKAAKIKPDPDIDIFMKALATEGQEAVFVTDYVLKLLGLDICADTMVGDEMIRGISGGQKKRVTTGEMLVGPSKALFMDEISTGLDSSTTYSIVNSLRQSVQILHGTAVISLLQPAPETYNLFDDIILLSDEKIVYQGPREDVLGFFESMGFKCPDRKGVADFLQEVTSKKDQQQYWVRRDETYRFITSKEFAEAHQSFHVGRKLADKLAASYDKSKSHPAALSTQKYGIGKKQLLKVCTERELLLMKRNSFVYIFKFIQLTIVALISMTLFFRTKMPRDTIEDGVKYVGALFLVVTQIMFNGMAEIALTIYKLPVFYKQRDLLFYPSWAYAVPTWILKMPITFAEVGLWVFLTYYVIGFDPSAARFFKQFLLLLSQNQMGISIVSLHWGSGKDHGKLLIHLEPLFCFCSLHWVGFFLFPS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="52152" e_stop="52767"/>
            <exon e_start="53039" e_stop="53076"/>
            <exon e_start="53170" e_stop="53269"/>
            <exon e_start="54526" e_stop="54633"/>
            <exon e_start="54717" e_stop="54836"/>
            <exon e_start="54917" e_stop="55000"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.997" e_score="0.998"/>
          <exon-intron don_prob="1.000" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.793" acc_prob="0.487" e_score="1.000"/>
          <exon-intron don_prob="0.706" acc_prob="0.820" e_score="0.975"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="52152" e_stop="52767" e_length="616"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.997">
            <gDNA_intron_boundary i_start="52768" i_stop="53038" i_length="271"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="53039" e_stop="53076" e_length="38"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.989">
            <gDNA_intron_boundary i_start="53077" i_stop="53169" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="53170" e_stop="53269" e_length="100"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.994">
            <gDNA_intron_boundary i_start="53270" i_stop="54525" i_length="1256"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="54526" e_stop="54633" e_length="108"/>
          </exon>
          <intron i_serial="4" don_prob="0.793" acc_prob="0.487">
            <gDNA_intron_boundary i_start="54634" i_stop="54716" i_length="83"/>
          </intron>
          <exon e_serial="5" e_score="0.975">
            <gDNA_exon_boundary e_start="54717" e_stop="54836" e_length="120"/>
          </exon>
          <intron i_serial="5" don_prob="0.706" acc_prob="0.820">
            <gDNA_intron_boundary i_start="54837" i_stop="54916" i_length="80"/>
          </intron>
          <exon e_serial="6" e_score="0.976">
            <gDNA_exon_boundary e_start="54917" e_stop="55000" e_length="84"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52152" stop="52767"/>
              <exon start="53039" stop="53076"/>
              <exon start="53170" stop="53269"/>
              <exon start="54526" stop="54633"/>
              <exon start="54717" stop="54836"/>
              <exon start="54917" stop="55000"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330311" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGCACGTTCGCCGCCGCCGCTGCGACCTACTACTTCATCTTTTCAGATATCCCAATGCCAAGCAAACGGAAATCTTCTCCGGCTACAAAGCCAGAGTCTTCATCCGGCAGTAGGAAGTCGAAGAGACTTGTAGTTGAAAGACCAGATCCAGTAGTAGCTCAACCATCTGATTCCGATTTTGAACCGGAACCTGTTTTATCATCAAAGAAGAAATCCACGAGACGAACAACAGCTGAAAGTTCAGTGGTAGCTTGTCAATCGGAAAGCAATAACAAGAAGTTGAAGAAGCCAACTGTTGAAAAGGCAGAATCTGGTGTAGCTTCACCAGCTGATAGAGATTTCGTATCTGAGTCTGATTCGGAGACGCCGAGCAAGAAATCCACGAGGCGAGCTGCAGTAAAGGTGGAACCTTTGGTGGATTCTGTAGCTGGGAGTGATTTTGTGGAAGAGGAAGAAGTAGATGGAATGGAGCTAGGGAGTCTGAAGAAGAGCTTGTCGATTTCACCTTCCAAAAGGAAGCCTAAGAGGGCTGAGAAAGTTAAAGATGAAGAGTGTGTACTTGCCGGTGACCCTGTTCCGGATGCAGAAGCTAGACTGAAGTGGCCTCATCGCTAT : AATAAAGGGAAAGAAAATGGTACCAAGAGCTTAAATGG : TCAAGATGATCCGGACCAGTTAATTCAAGCTAAGTGCCATTTTAGTCGAGCAGATGTTGATGGTCAGATATATTATCTCGAGGATGATGCACATGTGAAG : GCTGCTGATGGTGAGGACGATTACATTTGCAAGATTGTTGAATTCTTTGAAGCAGTTGACGGAGTGCAGTATTTTACAGCTCAGTGGTTTTACAGAGCTAAGGATACT : GTTATTAAAAGCCATGATCAGTTCATTGACAAAAAACGTGTATTCCTTTCTGAAATCAAGGATGACAATCCTCTTGATTGCCTTGTGACCAAACTAAAGATTGTTCCTGTGCCCTCAAAT : GCAACTTCACAGTTCAAGGAAAATGTAAAATCAAATTGTGATTTCTACTATGACATGAAGTACTTGCTTCCATACTCTTCCTTC</gDNA_template>
            <first_frame> L  H  V  R  R  R  R  C  D  L  L  L  H  L  F  R  Y  P  N  A  K  Q  T  E  I  F  S  G  Y  K  A  R  V  F  I  R  Q  *  E  V  E  E  T  C  S  *  K  T  R  S  S  S  S  S  T  I  *  F  R  F  *  T  G  T  C  F  I  I  K  E  E  I  H  E  T  N  N  S  *  K  F  S  G  S  L  S  I  G  K  Q  *  Q  E  V  E  E  A  N  C  *  K  G  R  I  W  C  S  F  T  S  *  *  R  F  R  I  *  V  *  F  G  D  A  E  Q  E  I  H  E  A  S  C  S  K  G  G  T  F  G  G  F  C  S  W  E  *  F  C  G  R  G  R  S  R  W  N  G  A  R  E  S  E  E  E  L  V  D  F  T  F  Q  K  E  A  *  E  G  *  E  S  *  R  *  R  V  C  T  C  R  *  P  C  S  G  C  R  S  *  T  E  V  A  S  S  L   : *  *  R  E  R  K  W  Y  Q  E  L  K  W  :  S  R  *  S  G  P  V  N  S  S  *  V  P  F  *  S  S  R  C  *  W  S  D  I  L  S  R  G  *  C  T  C  E   : G  C  *  W  *  G  R  L  H  L  Q  D  C  *  I  L  *  S  S  *  R  S  A  V  F  Y  S  S  V  V  L  Q  S  *  G  Y   : C  Y  *  K  P  *  S  V  H  *  Q  K  T  C  I  P  F  *  N  Q  G  *  Q  S  S  *  L  P  C  D  Q  T  K  D  C  S  C  A  L  K   : C  N  F  T  V  Q  G  K  C  K  I  K  L  *  F  L  L  *  H  E  V  L  A  S  I  L  F  L  </first_frame>
            <second_frame>  C  T  F  A  A  A  A  A  T  Y  Y  F  I  F  S  D  I  P  M  P  S  K  R  K  S  S  P  A  T  K  P  E  S  S  S  G  S  R  K  S  K  R  L  V  V  E  R  P  D  P  V  V  A  Q  P  S  D  S  D  F  E  P  E  P  V  L  S  S  K  K  K  S  T  R  R  T  T  A  E  S  S  V  V  A  C  Q  S  E  S  N  N  K  K  L  K  K  P  T  V  E  K  A  E  S  G  V  A  S  P  A  D  R  D  F  V  S  E  S  D  S  E  T  P  S  K  K  S  T  R  R  A  A  V  K  V  E  P  L  V  D  S  V  A  G  S  D  F  V  E  E  E  E  V  D  G  M  E  L  G  S  L  K  K  S  L  S  I  S  P  S  K  R  K  P  K  R  A  E  K  V  K  D  E  E  C  V  L  A  G  D  P  V  P  D  A  E  A  R  L  K  W  P  H  R  Y  :  N  K  G  K  E  N  G  T  K  S  L  N  G :   Q  D  D  P  D  Q  L  I  Q  A  K  C  H  F  S  R  A  D  V  D  G  Q  I  Y  Y  L  E  D  D  A  H  V  K  :  A  A  D  G  E  D  D  Y  I  C  K  I  V  E  F  F  E  A  V  D  G  V  Q  Y  F  T  A  Q  W  F  Y  R  A  K  D  T  :  V  I  K  S  H  D  Q  F  I  D  K  K  R  V  F  L  S  E  I  K  D  D  N  P  L  D  C  L  V  T  K  L  K  I  V  P  V  P  S  N  :  A  T  S  Q  F  K  E  N  V  K  S  N  C  D  F  Y  Y  D  M  K  Y  L  L  P  Y  S  S  F </second_frame>
            <third_frame>   A  R  S  P  P  P  L  R  P  T  T  S  S  F  Q  I  S  Q  C  Q  A  N  G  N  L  L  R  L  Q  S  Q  S  L  H  P  A  V  G  S  R  R  D  L  *  L  K  D  Q  I  Q  *  *  L  N  H  L  I  P  I  L  N  R  N  L  F  Y  H  Q  R  R  N  P  R  D  E  Q  Q  L  K  V  Q  W  *  L  V  N  R  K  A  I  T  R  S  *  R  S  Q  L  L  K  R  Q  N  L  V  *  L  H  Q  L  I  E  I  S  Y  L  S  L  I  R  R  R  R  A  R  N  P  R  G  E  L  Q  *  R  W  N  L  W  W  I  L  *  L  G  V  I  L  W  K  R  K  K  *  M  E  W  S  *  G  V  *  R  R  A  C  R  F  H  L  P  K  G  S  L  R  G  L  R  K  L  K  M  K  S  V  Y  L  P  V  T  L  F  R  M  Q  K  L  D  *  S  G  L  I  A  I :   I  K  G  K  K  M  V  P  R  A  *  M   : V  K  M  I  R  T  S  *  F  K  L  S  A  I  L  V  E  Q  M  L  M  V  R  Y  I  I  S  R  M  M  H  M  *  R :   L  L  M  V  R  T  I  T  F  A  R  L  L  N  S  L  K  Q  L  T  E  C  S  I  L  Q  L  S  G  F  T  E  L  R  I  L :   L  L  K  A  M  I  S  S  L  T  K  N  V  Y  S  F  L  K  S  R  M  T  I  L  L  I  A  L  *  P  N  *  R  L  F  L  C  P  Q  M :   Q  L  H  S  S  R  K  M  *  N  Q  I  V  I  S  T  M  T  *  S  T  C  F  H  T  L  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52153" stop="52767"/>
                    <exon start="53039" stop="53076"/>
                    <exon start="53170" stop="53269"/>
                    <exon start="54526" stop="54633"/>
                    <exon start="54717" stop="54836"/>
                    <exon start="54917" stop="55000"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1065</number_coding_nucleotides>
                  <number_encoded_amino_acids>355</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CTFAAAAATYYFIFSDIPMPSKRKSSPATKPESSSGSRKSKRLVVERPDPVVAQPSDSDFEPEPVLSSKKKSTRRTTAESSVVACQSESNNKKLKKPTVEKAESGVASPADRDFVSESDSETPSKKSTRRAAVKVEPLVDSVAGSDFVEEEEVDGMELGSLKKSLSISPSKRKPKRAEKVKDEECVLAGDPVPDAEARLKWPHRYNKGKENGTKSLNGQDDPDQLIQAKCHFSRADVDGQIYYLEDDAHVKAADGEDDYICKIVEFFEAVDGVQYFTAQWFYRAKDTVIKSHDQFIDKKRVFLSEIKDDNPLDCLVTKLKIVPVPSNATSQFKENVKSNCDFYYDMKYLLPYSSF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="50977" PGL_stop="49009"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="50977" e_stop="50952"/>
            <exon e_start="49465" e_stop="49009"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.956" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50977" e_stop="50952" e_length="26"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.956">
            <gDNA_intron_boundary i_start="50951" i_stop="49466" i_length="1486"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="49465" e_stop="49009" e_length="457"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50977" stop="50952"/>
              <exon start="49465" stop="49009"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331986" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACTCTTTCTCTCTATCAATTTGTAG : ATGCATTTACTGGTGATGATATCAATTCAGCCTTGAGAAAACTACTTTGAGTATCCTGATATTGGTTTCGTCTCTTCAGGACCCAAAATTGTGAACAAACAAAACTGCCTATATGACAGCACCAGAACGACCGCAACCAGAAGTGCCATCAATCGACCTCAGGGAGTACTCTGCATCATGACAGCACCAGGACGACCACAACCAGAAGTGCCATCAATCGACCTCGAGGAGTACTCTGCATCAAAGACTCTGATTCCTTTTGACCGACCAGTCCCTCTTCTTCGAGGTCCCATCAAGGCTGGCCCACAAGAAGAAACAGTTGGGCAATTCATCCTCGCATTTAAAGACCCTATCTCCTGGGCCTCTGCATACAAGGCTTGTGAATCTCAAGTCACTCAACAATGTGAATCTGGAGCTAGGATTGGTTGCTCTATCGCAGCCTCAGACAAATGTAAAA</gDNA_template>
            <first_frame> N  S  F  S  L  S  I  C  R :   C  I  Y  W  *  *  Y  Q  F  S  L  E  K  T  T  L  S  I  L  I  L  V  S  S  L  Q  D  P  K  L  *  T  N  K  T  A  Y  M  T  A  P  E  R  P  Q  P  E  V  P  S  I  D  L  R  E  Y  S  A  S  *  Q  H  Q  D  D  H  N  Q  K  C  H  Q  S  T  S  R  S  T  L  H  Q  R  L  *  F  L  L  T  D  Q  S  L  F  F  E  V  P  S  R  L  A  H  K  K  K  Q  L  G  N  S  S  S  H  L  K  T  L  S  P  G  P  L  H  T  R  L  V  N  L  K  S  L  N  N  V  N  L  E  L  G  L  V  A  L  S  Q  P  Q  T  N  V  K </first_frame>
            <second_frame>  T  L  S  L  Y  Q  F  V   : D  A  F  T  G  D  D  I  N  S  A  L  R  K  L  L  *  V  S  *  Y  W  F  R  L  F  R  T  Q  N  C  E  Q  T  K  L  P  I  *  Q  H  Q  N  D  R  N  Q  K  C  H  Q  S  T  S  G  S  T  L  H  H  D  S  T  R  T  T  T  T  R  S  A  I  N  R  P  R  G  V  L  C  I  K  D  S  D  S  F  *  P  T  S  P  S  S  S  R  S  H  Q  G  W  P  T  R  R  N  S  W  A  I  H  P  R  I  *  R  P  Y  L  L  G  L  C  I  Q  G  L  *  I  S  S  H  S  T  M  *  I  W  S  *  D  W  L  L  Y  R  S  L  R  Q  M  *   </second_frame>
            <third_frame>   L  F  L  S  I  N  L  *  :  M  H  L  L  V  M  I  S  I  Q  P  *  E  N  Y  F  E  Y  P  D  I  G  F  V  S  S  G  P  K  I  V  N  K  Q  N  C  L  Y  D  S  T  R  T  T  A  T  R  S  A  I  N  R  P  Q  G  V  L  C  I  M  T  A  P  G  R  P  Q  P  E  V  P  S  I  D  L  E  E  Y  S  A  S  K  T  L  I  P  F  D  R  P  V  P  L  L  R  G  P  I  K  A  G  P  Q  E  E  T  V  G  Q  F  I  L  A  F  K  D  P  I  S  W  A  S  A  Y  K  A  C  E  S  Q  V  T  Q  Q  C  E  S  G  A  R  I  G  C  S  I  A  A  S  D  K  C  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49429" stop="49010"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>420</number_coding_nucleotides>
                  <number_encoded_amino_acids>140</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ENYFEYPDIGFVSSGPKIVNKQNCLYDSTRTTATRSAINRPQGVLCIMTAPGRPQPEVPSIDLEEYSASKTLIPFDRPVPLLRGPIKAGPQEETVGQFILAFKDPISWASAYKACESQVTQQCESGARIGCSIAASDKCK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="-" PGL_start="62617" PGL_stop="61752"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="62617" e_stop="62550"/>
            <exon e_start="62479" e_stop="62225"/>
            <exon e_start="62149" e_stop="61752"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.000" e_score="0.926"/>
          <exon-intron don_prob="0.991" acc_prob="0.995" e_score="0.898"/>
          <exon-only e_score="0.907"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.926">
            <gDNA_exon_boundary e_start="62617" e_stop="62550" e_length="68"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.000">
            <gDNA_intron_boundary i_start="62549" i_stop="62480" i_length="70"/>
          </intron>
          <exon e_serial="2" e_score="0.898">
            <gDNA_exon_boundary e_start="62479" e_stop="62225" e_length="255"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.995">
            <gDNA_intron_boundary i_start="62224" i_stop="62150" i_length="75"/>
          </intron>
          <exon e_serial="3" e_score="0.907">
            <gDNA_exon_boundary e_start="62149" e_stop="61752" e_length="398"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="62617" stop="62550"/>
              <exon start="62479" stop="62225"/>
              <exon start="62149" stop="61752"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324763" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGCGTACAGTATATTACAGAGAAAGAGCTGCTGGAATGTATTCTGCCATCCCTTACGCCTTTGGACAA : ACTTTCATTGAAATACCATATGTCTTTGTGCAAGCTGTTTCTTATGGTGTTATCGTCTATGCTATGATTGGATTTGAATGGACTGTGACCAAGTTCTTTTGGTACTTGTTTATAATGTTCTTCACTCTCTTGTACTTCACCTTCTATGGAATGATGAGTGTTGCCATTACCCCAAATCAACATGTCGCGCAAATTGTCTCTGTCTCCGGATATGGAATGTGGAATCTTTTCTCAGGATTCATTGTTCCACGACCT : AGCATGCCCATATGGTGGAGATGGTACTATTGGGCTGATCCTGTTGCCTGGACATTGTATGGTTTGGTTGCATCACAATTCGGAGACCTCCAAAACAAAATTACTGATAGTGATGAGACAGCCAAACAATTCTTGAGGCGTTACTTTGGGTTCAAGCATGATTTTGTTGGAGTAGCTGCAGTGGTGACTGTTGCATATACTCTTGTTTTTGCCTTCACATTTGCTTTGGCTATTAAGGTTTTCAACTTCCAGAAAAGATAGAAGAGCTTACCTGCTGAACATCTTCATGAGGAAAATTCAAGAAATGCTTATAGAACTAATGTATTCAGGTTACCACTTGAAGATGTATATATATGATCTGTTTGTTTTGTATCACATTACTCTGCAATGAACTGATT</gDNA_template>
            <first_frame> S  V  Q  Y  I  T  E  K  E  L  L  E  C  I  L  P  S  L  T  P  L  D  K :   L  S  L  K  Y  H  M  S  L  C  K  L  F  L  M  V  L  S  S  M  L  *  L  D  L  N  G  L  *  P  S  S  F  G  T  C  L  *  C  S  S  L  S  C  T  S  P  S  M  E  *  *  V  L  P  L  P  Q  I  N  M  S  R  K  L  S  L  S  P  D  M  E  C  G  I  F  S  Q  D  S  L  F  H  D  L :   A  C  P  Y  G  G  D  G  T  I  G  L  I  L  L  P  G  H  C  M  V  W  L  H  H  N  S  E  T  S  K  T  K  L  L  I  V  M  R  Q  P  N  N  S  *  G  V  T  L  G  S  S  M  I  L  L  E  *  L  Q  W  *  L  L  H  I  L  L  F  L  P  S  H  L  L  W  L  L  R  F  S  T  S  R  K  D  R  R  A  Y  L  L  N  I  F  M  R  K  I  Q  E  M  L  I  E  L  M  Y  S  G  Y  H  L  K  M  Y  I  Y  D  L  F  V  L  Y  H  I  T  L  Q  *  T  D  </first_frame>
            <second_frame>  A  Y  S  I  L  Q  R  K  S  C  W  N  V  F  C  H  P  L  R  L  W  T   : N  F  H  *  N  T  I  C  L  C  A  S  C  F  L  W  C  Y  R  L  C  Y  D  W  I  *  M  D  C  D  Q  V  L  L  V  L  V  Y  N  V  L  H  S  L  V  L  H  L  L  W  N  D  E  C  C  H  Y  P  K  S  T  C  R  A  N  C  L  C  L  R  I  W  N  V  E  S  F  L  R  I  H  C  S  T  T   : *  H  A  H  M  V  E  M  V  L  L  G  *  S  C  C  L  D  I  V  W  F  G  C  I  T  I  R  R  P  P  K  Q  N  Y  *  *  *  *  D  S  Q  T  I  L  E  A  L  L  W  V  Q  A  *  F  C  W  S  S  C  S  G  D  C  C  I  Y  S  C  F  C  L  H  I  C  F  G  Y  *  G  F  Q  L  P  E  K  I  E  E  L  T  C  *  T  S  S  *  G  K  F  K  K  C  L  *  N  *  C  I  Q  V  T  T  *  R  C  I  Y  M  I  C  L  F  C  I  T  L  L  C  N  E  L  I </second_frame>
            <third_frame>   R  T  V  Y  Y  R  E  R  A  A  G  M  Y  S  A  I  P  Y  A  F  G  Q  :  T  F  I  E  I  P  Y  V  F  V  Q  A  V  S  Y  G  V  I  V  Y  A  M  I  G  F  E  W  T  V  T  K  F  F  W  Y  L  F  I  M  F  F  T  L  L  Y  F  T  F  Y  G  M  M  S  V  A  I  T  P  N  Q  H  V  A  Q  I  V  S  V  S  G  Y  G  M  W  N  L  F  S  G  F  I  V  P  R  P  :  S  M  P  I  W  W  R  W  Y  Y  W  A  D  P  V  A  W  T  L  Y  G  L  V  A  S  Q  F  G  D  L  Q  N  K  I  T  D  S  D  E  T  A  K  Q  F  L  R  R  Y  F  G  F  K  H  D  F  V  G  V  A  A  V  V  T  V  A  Y  T  L  V  F  A  F  T  F  A  L  A  I  K  V  F  N  F  Q  K  R  *  K  S  L  P  A  E  H  L  H  E  E  N  S  R  N  A  Y  R  T  N  V  F  R  L  P  L  E  D  V  Y  I  *  S  V  C  F  V  S  H  Y  S  A  M  N  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="-"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="62615" stop="62550"/>
                    <exon start="62479" stop="62225"/>
                    <exon start="62149" stop="61889"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>579</number_coding_nucleotides>
                  <number_encoded_amino_acids>193</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTVYYRERAAGMYSAIPYAFGQTFIEIPYVFVQAVSYGVIVYAMIGFEWTVTKFFWYLFIMFFTLLYFTFYGMMSVAITPNQHVAQIVSVSGYGMWNLFSGFIVPRPSMPIWWRWYYWADPVAWTLYGLVASQFGDLQNKITDSDETAKQFLRRYFGFKHDFVGVAAVVTVAYTLVFAFTFALAIKVFNFQKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="66113" PGL_stop="67000"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66113" e_stop="66180"/>
            <exon e_start="66251" e_stop="66505"/>
            <exon e_start="66599" e_stop="67000"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.379" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.978" e_score="0.988"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66113" e_stop="66180" e_length="68"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.379">
            <gDNA_intron_boundary i_start="66181" i_stop="66250" i_length="70"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="66251" e_stop="66505" e_length="255"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.978">
            <gDNA_intron_boundary i_start="66506" i_stop="66598" i_length="93"/>
          </intron>
          <exon e_serial="3" e_score="0.990">
            <gDNA_exon_boundary e_start="66599" e_stop="67000" e_length="402"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66113" stop="66180"/>
              <exon start="66251" stop="66505"/>
              <exon start="66599" stop="67000"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324763" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66816" stop="66994"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338083" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCGTACAGTATTTTACAGAGAAAGAGCTGCTGGAATGTATTCTTCCCTCCCCTATGCCTTTGGACAA : ACTTTCATTGAAATACCATATGTCTTTGTGCAAGCTGTTACCTATGCTGTTATCATCTATGCTATGATCGGATTTGAATGGACAGTGAGCAAATTCTTTTGGTACTTGTTTATCATGTATTTCACTTTCTTGTATTTCACCTTCTATGGTATGATGAGTGTTGCCGTTTCCCCAAATCAAAATATTGCGCAAATTGTCTCTCTCTTCGGCTATTCAATGTGGAATCTTTTCTCAGGATTCATGATTCCGCGACCT : AGTATGCCCATATGGTGGAGATGGTACTATTGGGCTGATCCTGTTGCCTGGACATTGTATGGTTTGGTTGTATCGCAATTCGGAGACCTCCAAGATAAAATTACTGATATAGATGAGACATCCAAACAATTCTTGAGGCGTTACTTTGGGTTCAAGCATGATTTTCTTGGAGTAGTTGCAGCTGTGACTGTTGCATATGCTGTTGTTTTTGCCTTCACATTTGGTTTGGCCATTAAGTTTTTCAACTTCCAGAAAAGATAGAAGAGCTTACCTGCTGAAGATGGAACATTCATGAAATGGTTATAAAACTAGTGTATTCAGGTTACCACTTGAACAAGTATATATATGTTCTGTTTGTTTTGTATCGCACTACTATGCAGTGAAATGATTTTGTAAGTTTGA</gDNA_template>
            <first_frame> S  V  Q  Y  F  T  E  K  E  L  L  E  C  I  L  P  S  P  M  P  L  D  K :   L  S  L  K  Y  H  M  S  L  C  K  L  L  P  M  L  L  S  S  M  L  *  S  D  L  N  G  Q  *  A  N  S  F  G  T  C  L  S  C  I  S  L  S  C  I  S  P  S  M  V  *  *  V  L  P  F  P  Q  I  K  I  L  R  K  L  S  L  S  S  A  I  Q  C  G  I  F  S  Q  D  S  *  F  R  D  L :   V  C  P  Y  G  G  D  G  T  I  G  L  I  L  L  P  G  H  C  M  V  W  L  Y  R  N  S  E  T  S  K  I  K  L  L  I  *  M  R  H  P  N  N  S  *  G  V  T  L  G  S  S  M  I  F  L  E  *  L  Q  L  *  L  L  H  M  L  L  F  L  P  S  H  L  V  W  P  L  S  F  S  T  S  R  K  D  R  R  A  Y  L  L  K  M  E  H  S  *  N  G  Y  K  T  S  V  F  R  L  P  L  E  Q  V  Y  I  C  S  V  C  F  V  S  H  Y  Y  A  V  K  *  F  C  K  F   </first_frame>
            <second_frame>  A  Y  S  I  L  Q  R  K  S  C  W  N  V  F  F  P  P  L  C  L  W  T   : N  F  H  *  N  T  I  C  L  C  A  S  C  Y  L  C  C  Y  H  L  C  Y  D  R  I  *  M  D  S  E  Q  I  L  L  V  L  V  Y  H  V  F  H  F  L  V  F  H  L  L  W  Y  D  E  C  C  R  F  P  K  S  K  Y  C  A  N  C  L  S  L  R  L  F  N  V  E  S  F  L  R  I  H  D  S  A  T   : *  Y  A  H  M  V  E  M  V  L  L  G  *  S  C  C  L  D  I  V  W  F  G  C  I  A  I  R  R  P  P  R  *  N  Y  *  Y  R  *  D  I  Q  T  I  L  E  A  L  L  W  V  Q  A  *  F  S  W  S  S  C  S  C  D  C  C  I  C  C  C  F  C  L  H  I  W  F  G  H  *  V  F  Q  L  P  E  K  I  E  E  L  T  C  *  R  W  N  I  H  E  M  V  I  K  L  V  Y  S  G  Y  H  L  N  K  Y  I  Y  V  L  F  V  L  Y  R  T  T  M  Q  *  N  D  F  V  S  L  </second_frame>
            <third_frame>   R  T  V  F  Y  R  E  R  A  A  G  M  Y  S  S  L  P  Y  A  F  G  Q  :  T  F  I  E  I  P  Y  V  F  V  Q  A  V  T  Y  A  V  I  I  Y  A  M  I  G  F  E  W  T  V  S  K  F  F  W  Y  L  F  I  M  Y  F  T  F  L  Y  F  T  F  Y  G  M  M  S  V  A  V  S  P  N  Q  N  I  A  Q  I  V  S  L  F  G  Y  S  M  W  N  L  F  S  G  F  M  I  P  R  P  :  S  M  P  I  W  W  R  W  Y  Y  W  A  D  P  V  A  W  T  L  Y  G  L  V  V  S  Q  F  G  D  L  Q  D  K  I  T  D  I  D  E  T  S  K  Q  F  L  R  R  Y  F  G  F  K  H  D  F  L  G  V  V  A  A  V  T  V  A  Y  A  V  V  F  A  F  T  F  G  L  A  I  K  F  F  N  F  Q  K  R  *  K  S  L  P  A  E  D  G  T  F  M  K  W  L  *  N  *  C  I  Q  V  T  T  *  T  S  I  Y  M  F  C  L  F  C  I  A  L  L  C  S  E  M  I  L  *  V  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66115" stop="66180"/>
                    <exon start="66251" stop="66505"/>
                    <exon start="66599" stop="66859"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>579</number_coding_nucleotides>
                  <number_encoded_amino_acids>193</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTVFYRERAAGMYSSLPYAFGQTFIEIPYVFVQAVTYAVIIYAMIGFEWTVSKFFWYLFIMYFTFLYFTFYGMMSVAVSPNQNIAQIVSLFGYSMWNLFSGFMIPRPSMPIWWRWYYWADPVAWTLYGLVVSQFGDLQDKITDIDETSKQFLRRYFGFKHDFLGVVAAVTVAYAVVFAFTFGLAIKFFNFQKR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="79122" PGL_stop="77748"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79122" e_stop="79110"/>
            <exon e_start="79022" e_stop="77748"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79122" e_stop="79110" e_length="13"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="1.000">
            <gDNA_intron_boundary i_start="79109" i_stop="79023" i_length="87"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="79022" e_stop="77748" e_length="1275"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79122" stop="79110"/>
              <exon start="79022" stop="77748"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321025" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGAACTTTGAG : ATTTAGGATATAGCAAAAGCAAAAATGGGAGGTGGTGGTAATTCTATGAGTAATCCAACAACTAAAAATCGAGTTCCAAGTTCAAAGCCCCCTTTTACGATTGGTGATATCAAGAAGGCTATCCCTCCTCATTGCTTTCAACGCTCTCTCGTTCGCTCCTCTTCCTATCTTATTTACGATCTCATACTTGTCTTCATCTTCTATTACATCGCCTCTACTTATTTCCACGTCCTTCCAAAACCGTATTATCCATACCTAGCATGGCCTATTTATTGGATCGTTCAAGGATGTGTTTGCACCGCACTATGGGTCATTGCCCATGAATGTGGCCACCAATCCTTTAGTGATTACCAATGGATAAATGACACTATCGGTTTTATCCTCCACTCTGCACTTTTAACACCATACTTCTCATGGAAATATAGTCATCGTCGTCATCACTCCAATACTAATTCCCTTGAGCATGATGAAAATCATGTGCCCAAACTTGAAGTCAAACTAAAATGGTACACTAAATTATACGTGAATAATCCACTTGGACGATTATTATTAATTGTCTTCACACTCACTGCTGGCTTACCTTTATACTATGCCATCAATATAGCCGGTAGACCTTATGATCGTTTTGCAAGTCATTATGATCCATATAGCCCTATCTACAATGACCGTGAGAGACTACAAATTTACATCTCAGATGCAGGTGTGATTGCAACTATTTATTTATTATATCGCGTTGCTCTAACACAAGGCCTAACTTGGGTTATATGCATCTATGGAGTACCCCTTGTAATTGTGAATGGGTTCATAGTGTTAATAACTTTACTGCATCACACTCATGCTTCATTGCCACATTATGATTCATCAGAGTGGAGTTGGCTAAAAGGAGCTCTAGCTACGGTAGATAGAGACTATGGTGTCCTAAATAAGGTGTTTCATCATATCGTAGATACACACGTTCTACATCATCTATTTTCAAGTATACCACATTATCATGCTGTCGAGGCAACCAAGGCCATCAAGCCGTTACTAGGAGAATACTACCAATTTGATGGAACTCCATTTTACAAAGCAATATGGAGGGATTTTAATGAGTGTCAATATGTGGAGAAAGATGAAGCATCTCAACATCAGGGTATTTTCTGGTATACAAATTACAACACATAATATTCATTAATAACAACTGGCTTACGAATGTGTTAGCCAATGCATGAGTTGTTGTTGTTATTTGTATTTTGGATGGTGTGTTATCATAATAATAATAATATTGTTACTTTA</gDNA_template>
            <first_frame> F  E  L  *   : D  L  G  Y  S  K  S  K  N  G  R  W  W  *  F  Y  E  *  S  N  N  *  K  S  S  S  K  F  K  A  P  F  Y  D  W  *  Y  Q  E  G  Y  P  S  S  L  L  S  T  L  S  R  S  L  L  F  L  S  Y  L  R  S  H  T  C  L  H  L  L  L  H  R  L  Y  L  F  P  R  P  S  K  T  V  L  S  I  P  S  M  A  Y  L  L  D  R  S  R  M  C  L  H  R  T  M  G  H  C  P  *  M  W  P  P  I  L  *  *  L  P  M  D  K  *  H  Y  R  F  Y  P  P  L  C  T  F  N  T  I  L  L  M  E  I  *  S  S  S  S  S  L  Q  Y  *  F  P  *  A  *  *  K  S  C  A  Q  T  *  S  Q  T  K  M  V  H  *  I  I  R  E  *  S  T  W  T  I  I  I  N  C  L  H  T  H  C  W  L  T  F  I  L  C  H  Q  Y  S  R  *  T  L  *  S  F  C  K  S  L  *  S  I  *  P  Y  L  Q  *  P  *  E  T  T  N  L  H  L  R  C  R  C  D  C  N  Y  L  F  I  I  S  R  C  S  N  T  R  P  N  L  G  Y  M  H  L  W  S  T  P  C  N  C  E  W  V  H  S  V  N  N  F  T  A  S  H  S  C  F  I  A  T  L  *  F  I  R  V  E  L  A  K  R  S  S  S  Y  G  R  *  R  L  W  C  P  K  *  G  V  S  S  Y  R  R  Y  T  R  S  T  S  S  I  F  K  Y  T  T  L  S  C  C  R  G  N  Q  G  H  Q  A  V  T  R  R  I  L  P  I  *  W  N  S  I  L  Q  S  N  M  E  G  F  *  *  V  S  I  C  G  E  R  *  S  I  S  T  S  G  Y  F  L  V  Y  K  L  Q  H  I  I  F  I  N  N  N  W  L  T  N  V  L  A  N  A  *  V  V  V  V  I  C  I  L  D  G  V  L  S  *  *  *  *  Y  C  Y  F  </first_frame>
            <second_frame>  L  N  F  E  :  I  *  D  I  A  K  A  K  M  G  G  G  G  N  S  M  S  N  P  T  T  K  N  R  V  P  S  S  K  P  P  F  T  I  G  D  I  K  K  A  I  P  P  H  C  F  Q  R  S  L  V  R  S  S  S  Y  L  I  Y  D  L  I  L  V  F  I  F  Y  Y  I  A  S  T  Y  F  H  V  L  P  K  P  Y  Y  P  Y  L  A  W  P  I  Y  W  I  V  Q  G  C  V  C  T  A  L  W  V  I  A  H  E  C  G  H  Q  S  F  S  D  Y  Q  W  I  N  D  T  I  G  F  I  L  H  S  A  L  L  T  P  Y  F  S  W  K  Y  S  H  R  R  H  H  S  N  T  N  S  L  E  H  D  E  N  H  V  P  K  L  E  V  K  L  K  W  Y  T  K  L  Y  V  N  N  P  L  G  R  L  L  L  I  V  F  T  L  T  A  G  L  P  L  Y  Y  A  I  N  I  A  G  R  P  Y  D  R  F  A  S  H  Y  D  P  Y  S  P  I  Y  N  D  R  E  R  L  Q  I  Y  I  S  D  A  G  V  I  A  T  I  Y  L  L  Y  R  V  A  L  T  Q  G  L  T  W  V  I  C  I  Y  G  V  P  L  V  I  V  N  G  F  I  V  L  I  T  L  L  H  H  T  H  A  S  L  P  H  Y  D  S  S  E  W  S  W  L  K  G  A  L  A  T  V  D  R  D  Y  G  V  L  N  K  V  F  H  H  I  V  D  T  H  V  L  H  H  L  F  S  S  I  P  H  Y  H  A  V  E  A  T  K  A  I  K  P  L  L  G  E  Y  Y  Q  F  D  G  T  P  F  Y  K  A  I  W  R  D  F  N  E  C  Q  Y  V  E  K  D  E  A  S  Q  H  Q  G  I  F  W  Y  T  N  Y  N  T  *  Y  S  L  I  T  T  G  L  R  M  C  *  P  M  H  E  L  L  L  L  F  V  F  W  M  V  C  Y  H  N  N  N  N  I  V  T  L </second_frame>
            <third_frame>   *  T  L  R :   F  R  I  *  Q  K  Q  K  W  E  V  V  V  I  L  *  V  I  Q  Q  L  K  I  E  F  Q  V  Q  S  P  L  L  R  L  V  I  S  R  R  L  S  L  L  I  A  F  N  A  L  S  F  A  P  L  P  I  L  F  T  I  S  Y  L  S  S  S  S  I  T  S  P  L  L  I  S  T  S  F  Q  N  R  I  I  H  T  *  H  G  L  F  I  G  S  F  K  D  V  F  A  P  H  Y  G  S  L  P  M  N  V  A  T  N  P  L  V  I  T  N  G  *  M  T  L  S  V  L  S  S  T  L  H  F  *  H  H  T  S  H  G  N  I  V  I  V  V  I  T  P  I  L  I  P  L  S  M  M  K  I  M  C  P  N  L  K  S  N  *  N  G  T  L  N  Y  T  *  I  I  H  L  D  D  Y  Y  *  L  S  S  H  S  L  L  A  Y  L  Y  T  M  P  S  I  *  P  V  D  L  M  I  V  L  Q  V  I  M  I  H  I  A  L  S  T  M  T  V  R  D  Y  K  F  T  S  Q  M  Q  V  *  L  Q  L  F  I  Y  Y  I  A  L  L  *  H  K  A  *  L  G  L  Y  A  S  M  E  Y  P  L  *  L  *  M  G  S  *  C  *  *  L  Y  C  I  T  L  M  L  H  C  H  I  M  I  H  Q  S  G  V  G  *  K  E  L  *  L  R  *  I  E  T  M  V  S  *  I  R  C  F  I  I  S  *  I  H  T  F  Y  I  I  Y  F  Q  V  Y  H  I  I  M  L  S  R  Q  P  R  P  S  S  R  Y  *  E  N  T  T  N  L  M  E  L  H  F  T  K  Q  Y  G  G  I  L  M  S  V  N  M  W  R  K  M  K  H  L  N  I  R  V  F  S  G  I  Q  I  T  T  H  N  I  H  *  *  Q  L  A  Y  E  C  V  S  Q  C  M  S  C  C  C  Y  L  Y  F  G  W  C  V  I  I  I  I  I  I  L  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0004A15.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79016" stop="77859"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DIAKAKMGGGGNSMSNPTTKNRVPSSKPPFTIGDIKKAIPPHCFQRSLVRSSSYLIYDLILVFIFYYIASTYFHVLPKPYYPYLAWPIYWIVQGCVCTALWVIAHECGHQSFSDYQWINDTIGFILHSALLTPYFSWKYSHRRHHSNTNSLEHDENHVPKLEVKLKWYTKLYVNNPLGRLLLIVFTLTAGLPLYYAINIAGRPYDRFASHYDPYSPIYNDRERLQIYISDAGVIATIYLLYRVALTQGLTWVICIYGVPLVIVNGFIVLITLLHHTHASLPHYDSSEWSWLKGALATVDRDYGVLNKVFHHIVDTHVLHHLFSSIPHYHAVEATKAIKPLLGEYYQFDGTPFYKAIWRDFNECQYVEKDEASQHQGIFWYTNYNT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="91949" PGL_stop="92698"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="91949" e_stop="92698"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="91949" e_stop="92698" e_length="750"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="91949" stop="92698"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341197" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGATAATTGTGTGTAATTATATATCATAGGTGCATGTTGCCTAGCAAAGGTAAACGACTTTCATAATTATGTTACAATCTCCATATAATTAGAATTGTAATTATGTGACAAGTATACAACAATTTCAACATCTCACTTAATTAAACTCCCTTAATTATATTAGTATAAGGGTTATATTCTAGAAAATCAATTTAAGTAATTTTAGAAGTTAAGGAAGGAGCCCTAAACCTAATATTTTCCTTTGTAGTCTAAATAGTGTAATATAATAATATGGTACCGTAGATTCAAAGTGGACTCCTTTATTTTTTGAGTTATTTAAGTTACCTTTTATAATCTTCGTCCATAACAATAATAACATATTTGGTTAGATTATAAGTAGGGTCTATGAAGAGTAGTGCGTACATAAATCTAAGAGTTTCCAATAGATCTTTATTTTAATGATTGCTGATATATGGAGTGATAAATAATACACCAAATATTTGAATATATAAAAATAATTTTTTTAAAATCACCCTTTTTCTTGCACTAGCTTAAAAGGAGATCAATATGTAATTTAAAACAAATTTTACGTACCTAGTCATTTCGTTAAAAAAAATGTATTTTAAGTACATGTGTTGTTAAAAATAATGAACTACTTAGTTGTTTTACAAAGAAATTGAACTCAAAGTGATTTGATATCAATAGGAAAAACAAACTTTGATTAGTCAAATATGTTATGCGTAACTAATACTACTTCCTATTTTTTTTTT</gDNA_template>
            <first_frame> E  I  I  V  C  N  Y  I  S  *  V  H  V  A  *  Q  R  *  T  T  F  I  I  M  L  Q  S  P  Y  N  *  N  C  N  Y  V  T  S  I  Q  Q  F  Q  H  L  T  *  L  N  S  L  N  Y  I  S  I  R  V  I  F  *  K  I  N  L  S  N  F  R  S  *  G  R  S  P  K  P  N  I  F  L  C  S  L  N  S  V  I  *  *  Y  G  T  V  D  S  K  W  T  P  L  F  F  E  L  F  K  L  P  F  I  I  F  V  H  N  N  N  N  I  F  G  *  I  I  S  R  V  Y  E  E  *  C  V  H  K  S  K  S  F  Q  *  I  F  I  L  M  I  A  D  I  W  S  D  K  *  Y  T  K  Y  L  N  I  *  K  *  F  F  *  N  H  P  F  S  C  T  S  L  K  G  D  Q  Y  V  I  *  N  K  F  Y  V  P  S  H  F  V  K  K  N  V  F  *  V  H  V  L  L  K  I  M  N  Y  L  V  V  L  Q  R  N  *  T  Q  S  D  L  I  S  I  G  K  T  N  F  D  *  S  N  M  L  C  V  T  N  T  T  S  Y  F  F  F </first_frame>
            <second_frame>  R  *  L  C  V  I  I  Y  H  R  C  M  L  P  S  K  G  K  R  L  S  *  L  C  Y  N  L  H  I  I  R  I  V  I  M  *  Q  V  Y  N  N  F  N  I  S  L  N  *  T  P  L  I  I  L  V  *  G  L  Y  S  R  K  S  I  *  V  I  L  E  V  K  E  G  A  L  N  L  I  F  S  F  V  V  *  I  V  *  Y  N  N  M  V  P  *  I  Q  S  G  L  L  Y  F  L  S  Y  L  S  Y  L  L  *  S  S  S  I  T  I  I  T  Y  L  V  R  L  *  V  G  S  M  K  S  S  A  Y  I  N  L  R  V  S  N  R  S  L  F  *  *  L  L  I  Y  G  V  I  N  N  T  P  N  I  *  I  Y  K  N  N  F  F  K  I  T  L  F  L  A  L  A  *  K  E  I  N  M  *  F  K  T  N  F  T  Y  L  V  I  S  L  K  K  M  Y  F  K  Y  M  C  C  *  K  *  *  T  T  *  L  F  Y  K  E  I  E  L  K  V  I  *  Y  Q  *  E  K  Q  T  L  I  S  Q  I  C  Y  A  *  L  I  L  L  P  I  F  F   </second_frame>
            <third_frame>   D  N  C  V  *  L  Y  I  I  G  A  C  C  L  A  K  V  N  D  F  H  N  Y  V  T  I  S  I  *  L  E  L  *  L  C  D  K  Y  T  T  I  S  T  S  H  L  I  K  L  P  *  L  Y  *  Y  K  G  Y  I  L  E  N  Q  F  K  *  F  *  K  L  R  K  E  P  *  T  *  Y  F  P  L  *  S  K  *  C  N  I  I  I  W  Y  R  R  F  K  V  D  S  F  I  F  *  V  I  *  V  T  F  Y  N  L  R  P  *  Q  *  *  H  I  W  L  D  Y  K  *  G  L  *  R  V  V  R  T  *  I  *  E  F  P  I  D  L  Y  F  N  D  C  *  Y  M  E  *  *  I  I  H  Q  I  F  E  Y  I  K  I  I  F  L  K  S  P  F  F  L  H  *  L  K  R  R  S  I  C  N  L  K  Q  I  L  R  T  *  S  F  R  *  K  K  C  I  L  S  T  C  V  V  K  N  N  E  L  L  S  C  F  T  K  K  L  N  S  K  *  F  D  I  N  R  K  N  K  L  *  L  V  K  Y  V  M  R  N  *  Y  Y  F  L  F  F  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0004A15.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 39 chains have been computed
$ 
$ memory statistics:
$ 32096 bytes spliced alignments in total
$ 16 spliced alignments have been stored
$ 2006 bytes was the average size of a spliced alignment
$ 17720 bytes predicted gene locations in total
$ 10 predicted gene locations have been stored
$ 1772 bytes was the average size of a predicted gene location
$ 11 megabytes was the average size of the backtrace matrix
$ 49 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-10 21:06:45
-->
