##gff-version 3
##sequence-region C12HBa0223G07.1 1 68036
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	1885	5625	0.999	-	0	ID=SGN-U581531_alignment_1;Target=SGN-U581531 1 2881 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	5356	5625	0.989	-	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U581531 1 269 +;Parent=SGN-U581531_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	1885	4496	1.000	-	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U581531 270 2881 +;Parent=SGN-U581531_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	7002	7607	0.995	-	0	ID=SGN-U603315_alignment_1;Target=SGN-U603315 1 606 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	7002	7607	0.995	-	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U603315 1 606 +;Parent=SGN-U603315_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	10361	12551	0.940	+	0	ID=SGN-U578865_alignment_1;Target=SGN-U578865 1 2192 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	10361	12551	0.940	+	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U578865 1 2192 +;Parent=SGN-U578865_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	10361	11867	0.952	-	0	ID=SGN-U581303_alignment_1;Target=SGN-U581303 1 1508 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	10361	11867	0.952	-	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U581303 1 1508 +;Parent=SGN-U581303_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	10361	11785	0.924	+	0	ID=SGN-U577296_alignment_1;Target=SGN-U577296 1 1426 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	10361	11785	0.924	+	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U577296 1 1426 +;Parent=SGN-U577296_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	10391	12941	0.907	+	0	ID=SGN-U579265_alignment_1;Target=SGN-U579265 1 1436 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	10391	11263	0.892	+	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U579265 1 873 +;Parent=SGN-U579265_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	12378	12941	0.931	+	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U579265 874 1436 +;Parent=SGN-U579265_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	11026	12498	0.919	+	0	ID=SGN-U592109_alignment_1;Target=SGN-U592109 1 723 -
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	11026	11226	0.900	+	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U592109 1 201 -;Parent=SGN-U592109_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	11970	12498	0.926	+	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U592109 202 723 -;Parent=SGN-U592109_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	11754	12079	0.911	-	0	ID=SGN-U591718_alignment_1;Target=SGN-U591718 1 326 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	11754	12079	0.911	-	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U591718 1 326 +;Parent=SGN-U591718_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	12258	13070	0.925	-	0	ID=SGN-U579150_alignment_1;Target=SGN-U579150 53 865 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	12258	13070	0.925	-	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U579150 53 865 +;Parent=SGN-U579150_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	14284	14460	0.921	-	0	ID=SGN-U599718_alignment_1;Target=SGN-U599718 1 177 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	14284	14460	0.921	-	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U599718 1 177 +;Parent=SGN-U599718_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	24491	25097	1.000	+	0	ID=SGN-U591335_alignment_1;Target=SGN-U591335 1 607 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	24491	25097	1.000	+	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U591335 1 607 +;Parent=SGN-U591335_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	33114	36504	0.994	+	0	ID=SGN-U567044_alignment_1;Target=SGN-U567044 1 1272 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	33114	33801	0.990	+	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U567044 1 690 +;Parent=SGN-U567044_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	34927	35150	1.000	+	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U567044 691 914 +;Parent=SGN-U567044_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	36019	36126	1.000	+	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U567044 915 1022 +;Parent=SGN-U567044_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	36255	36504	1.000	+	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U567044 1023 1272 +;Parent=SGN-U567044_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	47684	50829	1.000	-	0	ID=SGN-U578915_alignment_1;Target=SGN-U578915 1 698 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	50674	50829	1.000	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U578915 1 156 +;Parent=SGN-U578915_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	49394	49494	1.000	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U578915 157 257 +;Parent=SGN-U578915_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	48893	48956	1.000	-	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U578915 258 321 +;Parent=SGN-U578915_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	48077	48173	1.000	-	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U578915 322 418 +;Parent=SGN-U578915_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	47684	47963	1.000	-	0	ID=GTH_SGN_U_tom_match_part_23;Target=SGN-U578915 419 698 +;Parent=SGN-U578915_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	55417	56943	0.999	-	0	ID=SGN-U600522_alignment_1;Target=SGN-U600522 1 715 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	56836	56943	0.991	-	0	ID=GTH_SGN_U_tom_match_part_24;Target=SGN-U600522 1 108 +;Parent=SGN-U600522_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	55417	56023	1.000	-	0	ID=GTH_SGN_U_tom_match_part_25;Target=SGN-U600522 109 715 +;Parent=SGN-U600522_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	56930	57503	0.998	-	0	ID=SGN-U597734_alignment_1;Target=SGN-U597734 1 574 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	56930	57503	0.998	-	0	ID=GTH_SGN_U_tom_match_part_26;Target=SGN-U597734 1 574 +;Parent=SGN-U597734_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match	59744	62016	0.989	+	0	ID=SGN-U603491_alignment_1;Target=SGN-U603491 1 727 +
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	59744	59803	0.983	+	0	ID=GTH_SGN_U_tom_match_part_27;Target=SGN-U603491 1 60 +;Parent=SGN-U603491_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	60103	60240	1.000	+	0	ID=GTH_SGN_U_tom_match_part_28;Target=SGN-U603491 61 198 +;Parent=SGN-U603491_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	61346	61849	0.986	+	0	ID=GTH_SGN_U_tom_match_part_29;Target=SGN-U603491 199 700 +;Parent=SGN-U603491_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	match_part	61990	62016	0.889	+	0	ID=GTH_SGN_U_tom_match_part_30;Target=SGN-U603491 701 727 +;Parent=SGN-U603491_alignment_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	1885	5625	.	-	0	ID=GTH_SGN_U_tom_gene_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	1885	5625	.	-	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	5356	5625	0.989	-	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	1885	4496	1.000	-	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	7002	7607	.	-	0	ID=GTH_SGN_U_tom_gene_2
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	7002	7607	.	-	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	7002	7607	0.995	-	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	10361	12941	.	+	0	ID=GTH_SGN_U_tom_gene_3
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	10361	12551	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	10361	12551	0.940	+	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	11026	12498	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_2;Parent=GTH_SGN_U_tom_gene_3
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	11026	11226	0.900	+	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_3_AGS_2
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	11970	12498	0.926	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_3_AGS_2
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	10391	12941	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_3;Parent=GTH_SGN_U_tom_gene_3
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	10391	11263	0.892	+	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_3_AGS_3
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	12378	12941	0.931	+	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_3_AGS_3
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	10361	12079	.	-	0	ID=GTH_SGN_U_tom_gene_4
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	10361	12079	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	10361	12079	0.952	-	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	12258	13070	.	-	0	ID=GTH_SGN_U_tom_gene_5
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	12258	13070	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	12258	13070	0.925	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	14284	14460	.	-	0	ID=GTH_SGN_U_tom_gene_6
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	14284	14460	.	-	0	ID=GTH_SGN_U_tom_gene_6_AGS_1;Parent=GTH_SGN_U_tom_gene_6
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	14284	14460	0.921	-	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_6_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	24491	25097	.	+	0	ID=GTH_SGN_U_tom_gene_7
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	24491	25097	.	+	0	ID=GTH_SGN_U_tom_gene_7_AGS_1;Parent=GTH_SGN_U_tom_gene_7
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	24491	25097	1.000	+	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_7_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	33114	36504	.	+	0	ID=GTH_SGN_U_tom_gene_8
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	33114	36504	.	+	0	ID=GTH_SGN_U_tom_gene_8_AGS_1;Parent=GTH_SGN_U_tom_gene_8
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	33114	33801	0.990	+	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	34927	35150	1.000	+	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	36019	36126	1.000	+	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	36255	36504	1.000	+	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_8_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	47684	50829	.	-	0	ID=GTH_SGN_U_tom_gene_9
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	47684	50829	.	-	0	ID=GTH_SGN_U_tom_gene_9_AGS_1;Parent=GTH_SGN_U_tom_gene_9
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	50674	50829	1.000	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	49394	49494	1.000	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	48893	48956	1.000	-	0	ID=GTH_SGN_U_tom_exon_19;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	48077	48173	1.000	-	0	ID=GTH_SGN_U_tom_exon_20;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	47684	47963	1.000	-	0	ID=GTH_SGN_U_tom_exon_21;Parent=GTH_SGN_U_tom_gene_9_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	55417	57503	.	-	0	ID=GTH_SGN_U_tom_gene_10
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	55417	57503	.	-	0	ID=GTH_SGN_U_tom_gene_10_AGS_1;Parent=GTH_SGN_U_tom_gene_10
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	56836	57503	0.998	-	0	ID=GTH_SGN_U_tom_exon_22;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	55417	56023	1.000	-	0	ID=GTH_SGN_U_tom_exon_23;Parent=GTH_SGN_U_tom_gene_10_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	gene	59744	62016	.	+	0	ID=GTH_SGN_U_tom_gene_11
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	mRNA	59744	62016	.	+	0	ID=GTH_SGN_U_tom_gene_11_AGS_1;Parent=GTH_SGN_U_tom_gene_11
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	59744	59803	0.983	+	0	ID=GTH_SGN_U_tom_exon_24;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	60103	60240	1.000	+	0	ID=GTH_SGN_U_tom_exon_25;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	61346	61849	0.986	+	0	ID=GTH_SGN_U_tom_exon_26;Parent=GTH_SGN_U_tom_gene_11_AGS_1
C12HBa0223G07.1	GenomeThreader_SGN_U_tomato	exon	61990	62016	0.889	+	0	ID=GTH_SGN_U_tom_exon_27;Parent=GTH_SGN_U_tom_gene_11_AGS_1