##gff-version 3
##sequence-region C12HBa0138F19.1 1 39406
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match	12605	13797	0.901	+	0	ID=SGN-U591658_alignment_1;Target=SGN-U591658 1 739 -
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	12605	12800	0.893	+	0	ID=GTH_SGN_U_tom_match_part_1;Target=SGN-U591658 1 189 -;Parent=SGN-U591658_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	13228	13797	0.904	+	0	ID=GTH_SGN_U_tom_match_part_2;Target=SGN-U591658 190 739 -;Parent=SGN-U591658_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match	12622	14642	0.956	+	0	ID=SGN-U578561_alignment_1;Target=SGN-U578561 1 1942 +
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	12622	13741	0.954	+	0	ID=GTH_SGN_U_tom_match_part_3;Target=SGN-U578561 1 1111 +;Parent=SGN-U578561_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	13814	14642	0.960	+	0	ID=GTH_SGN_U_tom_match_part_4;Target=SGN-U578561 1112 1942 +;Parent=SGN-U578561_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match	25793	26631	0.948	+	0	ID=SGN-U594060_alignment_1;Target=SGN-U594060 1 839 +
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	25793	26631	0.948	+	0	ID=GTH_SGN_U_tom_match_part_5;Target=SGN-U594060 1 839 +;Parent=SGN-U594060_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match	28486	31678	0.991	+	0	ID=SGN-U569391_alignment_1;Target=SGN-U569391 1 686 +
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	28486	28586	0.990	+	0	ID=GTH_SGN_U_tom_match_part_6;Target=SGN-U569391 1 100 +;Parent=SGN-U569391_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	29636	29725	1.000	+	0	ID=GTH_SGN_U_tom_match_part_7;Target=SGN-U569391 101 190 +;Parent=SGN-U569391_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	29904	30001	1.000	+	0	ID=GTH_SGN_U_tom_match_part_8;Target=SGN-U569391 191 288 +;Parent=SGN-U569391_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	31280	31678	0.987	+	0	ID=GTH_SGN_U_tom_match_part_9;Target=SGN-U569391 289 686 +;Parent=SGN-U569391_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match	28486	31652	0.967	+	0	ID=SGN-U595251_alignment_1;Target=SGN-U595251 1 660 -
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	28486	28586	0.970	+	0	ID=GTH_SGN_U_tom_match_part_10;Target=SGN-U595251 1 100 -;Parent=SGN-U595251_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	29636	29725	0.989	+	0	ID=GTH_SGN_U_tom_match_part_11;Target=SGN-U595251 101 190 -;Parent=SGN-U595251_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	29904	30001	0.990	+	0	ID=GTH_SGN_U_tom_match_part_12;Target=SGN-U595251 191 288 -;Parent=SGN-U595251_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	31280	31652	0.954	+	0	ID=GTH_SGN_U_tom_match_part_13;Target=SGN-U595251 289 660 -;Parent=SGN-U595251_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match	33654	34674	0.995	-	0	ID=SGN-U565677_alignment_1;Target=SGN-U565677 1 810 +
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	34419	34674	0.992	-	0	ID=GTH_SGN_U_tom_match_part_14;Target=SGN-U565677 1 256 +;Parent=SGN-U565677_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	34053	34321	1.000	-	0	ID=GTH_SGN_U_tom_match_part_15;Target=SGN-U565677 257 525 +;Parent=SGN-U565677_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	33654	33939	0.993	-	0	ID=GTH_SGN_U_tom_match_part_16;Target=SGN-U565677 526 810 +;Parent=SGN-U565677_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match	34695	38244	0.971	-	0	ID=SGN-U588690_alignment_1;Target=SGN-U588690 1 761 +
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	38063	38244	0.923	-	0	ID=GTH_SGN_U_tom_match_part_17;Target=SGN-U588690 1 180 +;Parent=SGN-U588690_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	37154	37243	1.000	-	0	ID=GTH_SGN_U_tom_match_part_18;Target=SGN-U588690 181 270 +;Parent=SGN-U588690_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	35477	35521	1.000	-	0	ID=GTH_SGN_U_tom_match_part_19;Target=SGN-U588690 271 315 +;Parent=SGN-U588690_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	35147	35375	0.991	-	0	ID=GTH_SGN_U_tom_match_part_20;Target=SGN-U588690 316 544 +;Parent=SGN-U588690_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	34695	34910	0.977	-	0	ID=GTH_SGN_U_tom_match_part_21;Target=SGN-U588690 545 761 +;Parent=SGN-U588690_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match	37683	38251	0.993	-	0	ID=SGN-U588689_alignment_1;Target=SGN-U588689 1 566 +
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	match_part	37683	38251	0.993	-	0	ID=GTH_SGN_U_tom_match_part_22;Target=SGN-U588689 1 566 +;Parent=SGN-U588689_alignment_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	gene	12605	14642	.	+	0	ID=GTH_SGN_U_tom_gene_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	mRNA	12605	13797	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_1;Parent=GTH_SGN_U_tom_gene_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	12605	12800	0.893	+	0	ID=GTH_SGN_U_tom_exon_1;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	13228	13797	0.904	+	0	ID=GTH_SGN_U_tom_exon_2;Parent=GTH_SGN_U_tom_gene_1_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	mRNA	12622	14642	.	+	0	ID=GTH_SGN_U_tom_gene_1_AGS_2;Parent=GTH_SGN_U_tom_gene_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	12622	13741	0.954	+	0	ID=GTH_SGN_U_tom_exon_3;Parent=GTH_SGN_U_tom_gene_1_AGS_2
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	13814	14642	0.960	+	0	ID=GTH_SGN_U_tom_exon_4;Parent=GTH_SGN_U_tom_gene_1_AGS_2
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	gene	25793	26631	.	+	0	ID=GTH_SGN_U_tom_gene_2
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	mRNA	25793	26631	.	+	0	ID=GTH_SGN_U_tom_gene_2_AGS_1;Parent=GTH_SGN_U_tom_gene_2
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	25793	26631	0.948	+	0	ID=GTH_SGN_U_tom_exon_5;Parent=GTH_SGN_U_tom_gene_2_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	gene	28486	31678	.	+	0	ID=GTH_SGN_U_tom_gene_3
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	mRNA	28486	31678	.	+	0	ID=GTH_SGN_U_tom_gene_3_AGS_1;Parent=GTH_SGN_U_tom_gene_3
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	28486	28586	0.990	+	0	ID=GTH_SGN_U_tom_exon_6;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	29636	29725	1.000	+	0	ID=GTH_SGN_U_tom_exon_7;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	29904	30001	1.000	+	0	ID=GTH_SGN_U_tom_exon_8;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	31280	31678	0.987	+	0	ID=GTH_SGN_U_tom_exon_9;Parent=GTH_SGN_U_tom_gene_3_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	gene	33654	34674	.	-	0	ID=GTH_SGN_U_tom_gene_4
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	mRNA	33654	34674	.	-	0	ID=GTH_SGN_U_tom_gene_4_AGS_1;Parent=GTH_SGN_U_tom_gene_4
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	34419	34674	0.992	-	0	ID=GTH_SGN_U_tom_exon_10;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	34053	34321	1.000	-	0	ID=GTH_SGN_U_tom_exon_11;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	33654	33939	0.993	-	0	ID=GTH_SGN_U_tom_exon_12;Parent=GTH_SGN_U_tom_gene_4_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	gene	34695	38251	.	-	0	ID=GTH_SGN_U_tom_gene_5
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	mRNA	37683	38251	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_1;Parent=GTH_SGN_U_tom_gene_5
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	37683	38251	0.993	-	0	ID=GTH_SGN_U_tom_exon_13;Parent=GTH_SGN_U_tom_gene_5_AGS_1
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	mRNA	34695	38244	.	-	0	ID=GTH_SGN_U_tom_gene_5_AGS_2;Parent=GTH_SGN_U_tom_gene_5
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	38063	38244	0.923	-	0	ID=GTH_SGN_U_tom_exon_14;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	37154	37243	1.000	-	0	ID=GTH_SGN_U_tom_exon_15;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	35477	35521	1.000	-	0	ID=GTH_SGN_U_tom_exon_16;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	35147	35375	0.991	-	0	ID=GTH_SGN_U_tom_exon_17;Parent=GTH_SGN_U_tom_gene_5_AGS_2
C12HBa0138F19.1	GenomeThreader_SGN_U_tomato	exon	34695	34910	0.977	-	0	ID=GTH_SGN_U_tom_exon_18;Parent=GTH_SGN_U_tom_gene_5_AGS_2