<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 13:51:40"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321867" ref_strand="+" ref_description="SGN-U321867        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | signal peptidase, putative, similar to SP:P13679 Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-) {Canis familiaris}; contains Pfam profile PF00461: Signal peptidase I | chr1:19594194-19596343 FORWARD | Aliases: F6D8.18, F6D8_18(evalue: 2e-94, score=342) genbank/nr: gi|15219044|ref|NP_175669.1| signal peptidase subunit -related [Arabidopsis thaliana] gi|25290027|pir||G96566 hypothetical protein F6D8.18 [imported] - Arabidopsis thaliana gi|5903045|gb|AAD55604.1| Similar to gb|AF108945 signal peptidase 18 kDa subunit from Homo sapiens.  ESTs gb|H76629, gb|H76949 and gb|H76216 come from this gene. [Arabidopsis thaliana] gi|17381152|gb|AAL36388.1| putative signal peptidase subunit [Arabidopsis thaliana] gi|20465737|gb|AAM20337.1| putative signal peptidase subunit [Arabidopsis thaliana] gi|21536563|gb|AAM60895.1| signal peptidase subunit, putative [Arabidopsis thaliana](evalue: 1e-92, score=342)">
      <seq>atttattgatttcagaccaaaaggagaaacagagaagaaaacagagagacgcaaaaatgggatggatcggagagcaaatcgattcgataaagtcaattcagtacagacaactcgtaactcaagcaatcagtcttgggatgattgttacgtcagcacttataatatggaaagcattgatgtgtgtaactggcagcgagtcacctgtggtggttgtgctctctggaagtatggaaccaggctttaaaaggggtgacattcttttcttgcatatgagcaaggaccctattcgtgcgggagaaattgttgtgtttaatgttgatggacgtgaaattccaattgttcatagagtaataaaggttcacgagcgcaaagacactggagaagttaacgtccttacaaaaggagacaacaactttggtgatgacagacttctatatgctcaaggtcaactctggctgcaacgtcatcacatcatggggagagctgttgggttcttgccttatgttggttgggtaacgataatcatgaccgaaaaaccaattatcaagtatatattgataggtgcattgggattgttggtcatcacatcaaaagattagtggacaatggcttccttcagtatgactggcacaaaattagagagaaactatgtatctgccattttcaagaatcatgactcatttttggactaatagaatcctctttctagaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="7965" stop="2038"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7665" g_stop="7531" g_length="135"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="135" r_length="135" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7530" i_stop="5651" i_length="1880">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5650" g_stop="5538" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="248" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5537" i_stop="4971" i_length="567">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4970" g_stop="4899" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="320" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4898" i_stop="4513" i_length="386">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4512" g_stop="4477" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="356" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="4476" i_stop="3833" i_length="644">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3832" g_stop="3787" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="357" r_stop="402" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="3786" i_stop="3453" i_length="334">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3452" g_stop="3365" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="490" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3364" i_stop="2685" i_length="680">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="2684" g_stop="2627" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="491" r_stop="548" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="2626" i_stop="2510" i_length="117">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="2509" g_stop="2347" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="711" r_length="163" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="712" polyA_stop="751"/>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U321867" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>711</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7665" e_stop="7531"/>
          <exon e_start="5650" e_stop="5538"/>
          <exon e_start="4970" e_stop="4899"/>
          <exon e_start="4512" e_stop="4477"/>
          <exon e_start="3832" e_stop="3787"/>
          <exon e_start="3452" e_stop="3365"/>
          <exon e_start="2684" e_stop="2627"/>
          <exon e_start="2509" e_stop="2347"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTATTGATTTCAGACCAAAAGGAGAAACAGAGAAGAAAACAGAGAGACGCAAAAATGGGATGGATCGGAGAGCAAATCGATTCGATAAAGTCAATTCAGTACAGACAACTCGTAACTCAAGCAATCAGTCTTGGTTTGTGTTCATCTTTTGTCCTTTTGATTTAGTTCAATTCATTGAGCTTGTGTATATATATATGGATGGTTTGATTTTTTATTTTTTGATATAGTTCTGTGTGATTTTGGATTTATCAATTGATTAATTAATTGTGCTGCTGTGTGTGTTGTGACCCATATGGGTTGACTCATTTTGATGGATTCAGTATTCAGAATGAATTGACTGGTTTTTTGCTGGATGTTGAGTGATAGATTCTGGAAAACTTTCATTTTTTCATGGATTTGGGGTTTTTGATGATTTTTTTGGGTTTTGGACTTATCAATTGATGGACGCATTTGGGTTGACCCGTTTTGATGGATTCAGTATTTAGAATGAATTGACTGTTTTTTTTGCTGGTTGTTAACTTCTGGAAAAACTTCGTTTTGTGAGGATTTGGATTTTTTTTTTTTATGAATTTGTTGGGATTTCAGACTAGAGGCTGAGATTTTCTGGAAAAAAATTCTCTCTTTAGGTGTTTGGTGGAGTATATAGATTAGGTTCCTATCTGTTTCATGGTAAAAAGGCACAGCCTGGTTTGTTGCATTTACGCAGGGTTGGGGGAAAGGTCGCACCCCTAAAGGGTGTGTTGTAGGCAGCTTACCTAGGTGCAAACATCAATAGCGGTTTCATGGTGTATTTTAAATTTTTAGTGTTTTGCTTTTAGTACCAAAGAAACCAAATTTAGATGTTTATTTATGATTATTGAGCTAAGTTCAAGGCCAATGACCAAATCCAGTTGGTTTTTAAGCTTGTTTGAGACATCCCATGGAAGTTTTGAAGTAGCTTCTTGTTAGGTGGCATTCATGTGGTTGCTAACTGTGTCTTGAACGATTGCTTGTTTGGGTTGTGCAGTTTGCTCAGAAATAGGCTACAAGTAGTCCTGTACCTTATTCTTCTTTATCTAATTATTGAAATAATTTGAAATGAAGTGTCCAACTTTGTAGTCATTGTCTAGAGGTGAATTATAGAGCATGAAATAGCTGTGTTCCCTTATTCACTTATTATCTATAGGTTCACATATTTTATGTTATGAAGCTGAAAGATTTATACCCAAATCAAGATATCTGTTCTAGTCAATGTTAGCAAAAAGAGAGAACTGTTTTATGCATATTTGTAGTTTATTTTTGGGCATTAAAAATCAAGAAATATCTTAATTGTTAATGACATGGTTGAATTATATCTCCATGTAAGGATATTATGAAACTTAACATTGCCCATTGAGAAAAATTTATTATCTTAGAAAATCATCTTCTCAAATAATTAAATGTGCAATAATGCAACTATGGAACTAATGCAGATGCAAGCTGAAGCGAATGTCTATCCTCTTCTCAATGATTTAGTGTCTAGTTTTTGCTTTGTTGCGGATTATACGAGCTAGAAAATAGTTGGACTTCTAGATTGGTATAGAGGGAATATCTAGTTGGCATTGATTTGAAGAATTGAACTTGAAATTCAGTTTACAAACTTTACAAGAAGTGTTTGTTTTGGCTGCTTTTGCCAAGTGAAAGTTGACTACTTTGGGAAATAATTTCAGACTCAAATTTTCAAATATTTCAACTCAGAATTGACTTCTTGAATTTTTATTTTGAAGAATAGAGTCCGAGTCTTTGAACAATTTGAAAACCTTAGTTTTAAATTTGTTAGAGCACTTGTTTCTTTTTTTTTTTTTTGGCAAAATCAGTTCAACCCCACACTTCTTGAAAGAATTGATATTAGAACTGAGTTGTTCAATGTTAAATCTATTTTCATTTCTTCTGATGTGTGAAAAAGTATGAAAATGGAAGTTGATGGATTTTGTTCTTTACTCTGTAAAAGTTAATATTCTTTAGTCTGACCCTTCTTCACATAATCACTTTCAGGGATGATTGTTACGTCAGCACTTATAATATGGAAAGCATTGATGTGTGTAACTGGCAGCGAGTCACCTGTGGTGGTTGTGCTCTCTGGAAGTATGGAACCAGGCTTTAAAAGGGTGAGCTAAAGAAACTTGTTCACAAGAAAAAAAAGAGGACTTGGGGATGGGAGAGGGCATCTAAACAAACGGATAACAGCCAACTGTAGCTGGACTTGTTTCTACTTCTTTTGCTGTGTGCTACTCTGTTTGTTTATCCTTTGCTAAAGATTCTTTACTAGAGGTTAAATACTAGAGGATATTAGGATATGAAACTAAAGAAAGGGAGTTCAAAAAAAGTTTTGTTTAACTATCTTGTTTTTCATCTAAATATGCATAATCTATGCTAGATATATCTTCTTGTATTTGGCTTATTGCTGAATAGATATCAGGGTTTCTGGTTTCAGTAGCAACTTGTTATTATTTGAAATAAATAATGAGCCTTCCTATTCTAATGTTGTGCAAAGTACGCCTTTCATGTGAGTGACAGTATGATCCTGGTGTCTTTCTTACTATCGAGGAGAAACTCTCCTGAATTCCTTTTCTTTTCGTTTACACTATAGTGAGAAGTAGAAATACTTCTTTAAGTGGAGTGTTAGTTGCTCTTTCGACTCTGTATTACTGAAAACATCGTCTACTTTCTTGCAGGGTGACATTCTTTTCTTGCATATGAGCAAGGACCCTATTCGTGCGGGAGAAATTGTTGTGTTTAATGTTGATGTAAGTAGTGCTTACCAGCATCTTCTGTTTTACCTGTTTTCTGCTCGAGTTACTTTGGCTTTTGAGAAGATAAACATACACAATAAACAATATTTCTTTGTATTCTCTGCTTTTGCAATGTCACTTGTGGGAGTTATTTATGTTCCCATAGTAACAGCTTGGCACCTTTTCACATTTCTATTTCGTCTACAACAACAGGATTAGGCACATATTAGAATAAAAATTGTTTCATTGAATAGACCTTATTTAGTTTTGCTCATAAATACCAGTAATATCTATTTTATGATTGGACTTCAATCTGTCAAAATCATGTTCCTGAAATTATTGCTATCATTTATATTGACTTCAAAATTTACTAATGCTGATGGCATTTTTTTGTTGCACAGGGACGTGAAATTCCAATTGTTCATAGAGTAATAAAGGTATGTTGGGAAGTTTTCTCTCTGTACCAAATTTTCTTTCATCTGGTTGTGTTGCCTGCATCTAATGTTTCTGTGCACTGGTAGTAAAACAAGGAATGTGCAATTAATTATCAATATTTGTAAAGGAAAAGAAGGATATAAGGGATTGATAGATGAAAGCACATTCTGAAGTGATAAAGTGATAGAATGACCCTCTTTTAACTAGATTAGGGTATGCAACCAATCAGAGCGGGCTTGGTTTGAAGCCTGGCTGATGATTAGCCATTCCTCTCTTCCTTGATAATTGAGAGAAGTACATACATAAAAAGTAAATTCTGGAGTCATATACCAGTGATGAATCTAACCGAGAATAGACTGTAAATTTCACAAATATTATCAGCAACTTTCTGTATCATTTTCTGCACGTGGTAATTCAATTTGTAATACAACTTTGTTGTATTTACTTCCAAACTCAATCCAAGTACCAACCTTCTGAACGAAGAGGGAACAGAAATTAAAATATTGTTGAATAATGACATGATAAGAAGGCACGTGTTTCCTGTACTTAACTAATTTTGGTTGTATCTGACATTTGCTGTCTGCCCACTTTTTCCTTCCTCTTGGGTAAACTAACCACCATTACTTCTTTATGTTTCCCCTTGTAGGTTCACGAGCGCAAAGACACTGGAGAAGTTAACGTCCTTACAAAAGGTATTTGTTTATGATGCATATTAGGTTAGAAGTCAAGAATGTATTGTATAGATCCCTTCCGCGCTCTTTCTCTCCCTCTCTCTCTGCATTGAGAGTCGGTTATCATAAATTTATTACAATTCATAAGGTGCTCATCAATCATTTCATAGTTTTTTATTTAATGAAAAAGTTTTACTTCAGACAATAATCTTCTGCTTGTTTGTTTGTACTGATCAACTGAGAAAGCCTTCTGTTATTTGCTTGTCCCCTAATTATTGTTAAGCAAGGTTTTATGGTTCTTACTCCTCAATAATGACTACTAATTTTCTTTGCTGTATATGATTCAAATCTTTAGGAGACAACAACTTTGGTGATGACAGACTTCTATATGCTCAAGGTCAACTCTGGCTGCAACGTCATCACATCATGGGGAGAGCTGTTGGGTGAGTTGACAGTTAGATCTGCTCTTTAGATCTTTGCTTTCTCGTTTCTTGAGGTCCTCTGCTTAAGAGACCCATCAGCAATTGTTAGGTTGTGAGGTCTTACAGTGGTGTTGCCTTGGCTCTCATTCCCTTCTATGCTTTATCTTATTTGAATATGCACCACTTCCTTTCGATTCTACTCTATGCAATATTGCAAACTCCAACAACTAATCCATTATAAATATGCAGAATTCATATTGTTAATCATTTTCCATTGGAAGATCCTCCACGTAAAGTAAAATTTTCACAGAAGTTGTCATTTTTTATACCACTATTTCCATGCTAGGGAAGTTTCATGAATTTGTTGACACTCGAGAAAGAATTGAAGTTTTCACTCGTATCTCTCCTTTTTTTCATTCTTTTTATAGTACTACTTTTATTTTCAGTACTTCTTTTTCTTCAATATTTCCATCATAGCTTTCAAACCTGTTCTGGAAAACGTTTTGTCTTCAGGCGAGTGTCTATTGGAAACAACCTCTCTACCTCACAGAGGTAGGGGTAAGGTCTGGTCTACGTACGCCCAACCCTCCCCAGACCCCACTTGTGCGAGTATATTCAGAATATGTTAATTGTATTCAGCCCCCCTTTGTGTGTTACCTATTTGTTCCTTGAATGCTGAACGACTTGCTTGTTAATTTCAGGTTCTTGCCTTATGTTGGTTGGGTAACGATAATCATGACCGAAAAACCAATTATCAAGGTTTGTTGTCTATTGAACTTCTAATTCTGCTTTTACATTAGTGCTTTATAAGGTTAACTATCTAGGTGATATGGAATTCAAATGCTAAGACTTTTTTTTCCTTTCTTCTTATTGCAGTATATATTGATAGGTGCATTGGGATTGTTGGTCATCACATCAAAAGATTAGTGGACAATGGCTTCCTTCAGTATGACTGGCACAAAATTAGAGAGAAACTATGTATCTGCCATTTTCAAGAATCATGACTCATTTTTGGACTAATAGAATCCTCTTTCTAGAC</genome_strand>
        <mrna_strand>ATTTATTGATTTCAGACCAAAAGGAGAAACAGAGAAGAAAACAGAGAGACGCAAAAATGGGATGGATCGGAGAGCAAATCGATTCGATAAAGTCAATTCAGTACAGACAACTCGTAACTCAAGCAATCAGTCTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATTGTTACGTCAGCACTTATAATATGGAAAGCATTGATGTGTGTAACTGGCAGCGAGTCACCTGTGGTGGTTGTGCTCTCTGGAAGTATGGAACCAGGCTTTAAAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACATTCTTTTCTTGCATATGAGCAAGGACCCTATTCGTGCGGGAGAAATTGTTGTGTTTAATGTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................GGACGTGAAATTCCAATTGTTCATAGAGTAATAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACGAGCGCAAAGACACTGGAGAAGTTAACGTCCTTACAAAAG..............................................................................................................................................................................................................................................................................................................................................GAGACAACAACTTTGGTGATGACAGACTTCTATATGCTCAAGGTCAACTCTGGCTGCAACGTCATCACATCATGGGGAGAGCTGTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGCCTTATGTTGGTTGGGTAACGATAATCATGACCGAAAAACCAATTATCAAG.....................................................................................................................TATATATTGATAGGTGCATTGGGATTGTTGGTCATCACATCAAAAGATTAGTGGACAATGGCTTCCTTCAGTATGACTGGCACAAAATTAGAGAGAAACTATGTATCTGCCATTTTCAAGAATCATGACTCATTTTTGGACTAATAGAATCCTCTTTCTAGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321868" ref_strand="+" ref_description="SGN-U321868        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | signal peptidase, putative, similar to SP:P13679 Microsomal signal peptidase 21 kDa subunit (EC 3.4.-.-) {Canis familiaris}; contains Pfam profile PF00461: Signal peptidase I | chr1:19594194-19596343 FORWARD | Aliases: F6D8.18, F6D8_18(evalue: 2e-94, score=342) genbank/nr: gi|15219044|ref|NP_175669.1| signal peptidase subunit -related [Arabidopsis thaliana] gi|25290027|pir||G96566 hypothetical protein F6D8.18 [imported] - Arabidopsis thaliana gi|5903045|gb|AAD55604.1| Similar to gb|AF108945 signal peptidase 18 kDa subunit from Homo sapiens.  ESTs gb|H76629, gb|H76949 and gb|H76216 come from this gene. [Arabidopsis thaliana] gi|17381152|gb|AAL36388.1| putative signal peptidase subunit [Arabidopsis thaliana] gi|20465737|gb|AAM20337.1| putative signal peptidase subunit [Arabidopsis thaliana] gi|21536563|gb|AAM60895.1| signal peptidase subunit, putative [Arabidopsis thaliana](evalue: 1e-92, score=342)">
      <seq>aacagagaagaaaacagagagacgcaaaaatgggatggatcggagagcaaatcgattcgataaagtcaattcagtacagacaactcgtaactcaagcaatcagtcttgggatgattgttacgtcagcacttataatatggaaagcattgatgtgtgtaactggcagcgagtcacctgtggtggttgtgctctctggaagtatggaaccaggctttaaaaggggtgacattcttttcttgcatatgagcaaggaccctattcgtgcgggagaaattgttgtgtttaatgttgatggacgtgaaattccaattgttcatagagtaataaaggttcacgagcgcaaagacactggagaagttaacgtccttacaaaaggagacaacaactttggtgatgacagacttctatatgctcaaggtcaactctggctgcaacgtcatcacatcatggggagagctgttgggttcttgccttatgttggttgggtaacgataatcatgaccgaaaaaccaattatcaagtatatattgataggtgcattgggattgttggtcatcacatcaaaagattagtggacaatggcttccttcagtatgactggcacaaaattagagagaaactatgtatctgccattttcaagaatcatgactcatttttggactaatagaatcctctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="7938" stop="2051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7638" g_stop="7531" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7530" i_stop="5651" i_length="1880">
            <donor d_prob="0.859" d_score="1.00"/>
            <acceptor a_prob="0.892" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="5650" g_stop="5538" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="221" r_length="113" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="5537" i_stop="4971" i_length="567">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4970" g_stop="4899" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="293" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4898" i_stop="4513" i_length="386">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4512" g_stop="4477" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="294" r_stop="329" r_length="36" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="4476" i_stop="3833" i_length="644">
            <donor d_prob="0.998" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3832" g_stop="3787" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="375" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="3786" i_stop="3453" i_length="334">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3452" g_stop="3365" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="376" r_stop="463" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="3364" i_stop="2685" i_length="680">
            <donor d_prob="0.920" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="2684" g_stop="2627" g_length="58"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="521" r_length="58" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="2626" i_stop="2510" i_length="117">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="2509" g_stop="2351" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="680" r_length="159" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U321868" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321868" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7638" e_stop="7531"/>
          <exon e_start="5650" e_stop="5538"/>
          <exon e_start="4970" e_stop="4899"/>
          <exon e_start="4512" e_stop="4477"/>
          <exon e_start="3832" e_stop="3787"/>
          <exon e_start="3452" e_stop="3365"/>
          <exon e_start="2684" e_stop="2627"/>
          <exon e_start="2509" e_stop="2351"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGAGAAGAAAACAGAGAGACGCAAAAATGGGATGGATCGGAGAGCAAATCGATTCGATAAAGTCAATTCAGTACAGACAACTCGTAACTCAAGCAATCAGTCTTGGTTTGTGTTCATCTTTTGTCCTTTTGATTTAGTTCAATTCATTGAGCTTGTGTATATATATATGGATGGTTTGATTTTTTATTTTTTGATATAGTTCTGTGTGATTTTGGATTTATCAATTGATTAATTAATTGTGCTGCTGTGTGTGTTGTGACCCATATGGGTTGACTCATTTTGATGGATTCAGTATTCAGAATGAATTGACTGGTTTTTTGCTGGATGTTGAGTGATAGATTCTGGAAAACTTTCATTTTTTCATGGATTTGGGGTTTTTGATGATTTTTTTGGGTTTTGGACTTATCAATTGATGGACGCATTTGGGTTGACCCGTTTTGATGGATTCAGTATTTAGAATGAATTGACTGTTTTTTTTGCTGGTTGTTAACTTCTGGAAAAACTTCGTTTTGTGAGGATTTGGATTTTTTTTTTTTATGAATTTGTTGGGATTTCAGACTAGAGGCTGAGATTTTCTGGAAAAAAATTCTCTCTTTAGGTGTTTGGTGGAGTATATAGATTAGGTTCCTATCTGTTTCATGGTAAAAAGGCACAGCCTGGTTTGTTGCATTTACGCAGGGTTGGGGGAAAGGTCGCACCCCTAAAGGGTGTGTTGTAGGCAGCTTACCTAGGTGCAAACATCAATAGCGGTTTCATGGTGTATTTTAAATTTTTAGTGTTTTGCTTTTAGTACCAAAGAAACCAAATTTAGATGTTTATTTATGATTATTGAGCTAAGTTCAAGGCCAATGACCAAATCCAGTTGGTTTTTAAGCTTGTTTGAGACATCCCATGGAAGTTTTGAAGTAGCTTCTTGTTAGGTGGCATTCATGTGGTTGCTAACTGTGTCTTGAACGATTGCTTGTTTGGGTTGTGCAGTTTGCTCAGAAATAGGCTACAAGTAGTCCTGTACCTTATTCTTCTTTATCTAATTATTGAAATAATTTGAAATGAAGTGTCCAACTTTGTAGTCATTGTCTAGAGGTGAATTATAGAGCATGAAATAGCTGTGTTCCCTTATTCACTTATTATCTATAGGTTCACATATTTTATGTTATGAAGCTGAAAGATTTATACCCAAATCAAGATATCTGTTCTAGTCAATGTTAGCAAAAAGAGAGAACTGTTTTATGCATATTTGTAGTTTATTTTTGGGCATTAAAAATCAAGAAATATCTTAATTGTTAATGACATGGTTGAATTATATCTCCATGTAAGGATATTATGAAACTTAACATTGCCCATTGAGAAAAATTTATTATCTTAGAAAATCATCTTCTCAAATAATTAAATGTGCAATAATGCAACTATGGAACTAATGCAGATGCAAGCTGAAGCGAATGTCTATCCTCTTCTCAATGATTTAGTGTCTAGTTTTTGCTTTGTTGCGGATTATACGAGCTAGAAAATAGTTGGACTTCTAGATTGGTATAGAGGGAATATCTAGTTGGCATTGATTTGAAGAATTGAACTTGAAATTCAGTTTACAAACTTTACAAGAAGTGTTTGTTTTGGCTGCTTTTGCCAAGTGAAAGTTGACTACTTTGGGAAATAATTTCAGACTCAAATTTTCAAATATTTCAACTCAGAATTGACTTCTTGAATTTTTATTTTGAAGAATAGAGTCCGAGTCTTTGAACAATTTGAAAACCTTAGTTTTAAATTTGTTAGAGCACTTGTTTCTTTTTTTTTTTTTTGGCAAAATCAGTTCAACCCCACACTTCTTGAAAGAATTGATATTAGAACTGAGTTGTTCAATGTTAAATCTATTTTCATTTCTTCTGATGTGTGAAAAAGTATGAAAATGGAAGTTGATGGATTTTGTTCTTTACTCTGTAAAAGTTAATATTCTTTAGTCTGACCCTTCTTCACATAATCACTTTCAGGGATGATTGTTACGTCAGCACTTATAATATGGAAAGCATTGATGTGTGTAACTGGCAGCGAGTCACCTGTGGTGGTTGTGCTCTCTGGAAGTATGGAACCAGGCTTTAAAAGGGTGAGCTAAAGAAACTTGTTCACAAGAAAAAAAAGAGGACTTGGGGATGGGAGAGGGCATCTAAACAAACGGATAACAGCCAACTGTAGCTGGACTTGTTTCTACTTCTTTTGCTGTGTGCTACTCTGTTTGTTTATCCTTTGCTAAAGATTCTTTACTAGAGGTTAAATACTAGAGGATATTAGGATATGAAACTAAAGAAAGGGAGTTCAAAAAAAGTTTTGTTTAACTATCTTGTTTTTCATCTAAATATGCATAATCTATGCTAGATATATCTTCTTGTATTTGGCTTATTGCTGAATAGATATCAGGGTTTCTGGTTTCAGTAGCAACTTGTTATTATTTGAAATAAATAATGAGCCTTCCTATTCTAATGTTGTGCAAAGTACGCCTTTCATGTGAGTGACAGTATGATCCTGGTGTCTTTCTTACTATCGAGGAGAAACTCTCCTGAATTCCTTTTCTTTTCGTTTACACTATAGTGAGAAGTAGAAATACTTCTTTAAGTGGAGTGTTAGTTGCTCTTTCGACTCTGTATTACTGAAAACATCGTCTACTTTCTTGCAGGGTGACATTCTTTTCTTGCATATGAGCAAGGACCCTATTCGTGCGGGAGAAATTGTTGTGTTTAATGTTGATGTAAGTAGTGCTTACCAGCATCTTCTGTTTTACCTGTTTTCTGCTCGAGTTACTTTGGCTTTTGAGAAGATAAACATACACAATAAACAATATTTCTTTGTATTCTCTGCTTTTGCAATGTCACTTGTGGGAGTTATTTATGTTCCCATAGTAACAGCTTGGCACCTTTTCACATTTCTATTTCGTCTACAACAACAGGATTAGGCACATATTAGAATAAAAATTGTTTCATTGAATAGACCTTATTTAGTTTTGCTCATAAATACCAGTAATATCTATTTTATGATTGGACTTCAATCTGTCAAAATCATGTTCCTGAAATTATTGCTATCATTTATATTGACTTCAAAATTTACTAATGCTGATGGCATTTTTTTGTTGCACAGGGACGTGAAATTCCAATTGTTCATAGAGTAATAAAGGTATGTTGGGAAGTTTTCTCTCTGTACCAAATTTTCTTTCATCTGGTTGTGTTGCCTGCATCTAATGTTTCTGTGCACTGGTAGTAAAACAAGGAATGTGCAATTAATTATCAATATTTGTAAAGGAAAAGAAGGATATAAGGGATTGATAGATGAAAGCACATTCTGAAGTGATAAAGTGATAGAATGACCCTCTTTTAACTAGATTAGGGTATGCAACCAATCAGAGCGGGCTTGGTTTGAAGCCTGGCTGATGATTAGCCATTCCTCTCTTCCTTGATAATTGAGAGAAGTACATACATAAAAAGTAAATTCTGGAGTCATATACCAGTGATGAATCTAACCGAGAATAGACTGTAAATTTCACAAATATTATCAGCAACTTTCTGTATCATTTTCTGCACGTGGTAATTCAATTTGTAATACAACTTTGTTGTATTTACTTCCAAACTCAATCCAAGTACCAACCTTCTGAACGAAGAGGGAACAGAAATTAAAATATTGTTGAATAATGACATGATAAGAAGGCACGTGTTTCCTGTACTTAACTAATTTTGGTTGTATCTGACATTTGCTGTCTGCCCACTTTTTCCTTCCTCTTGGGTAAACTAACCACCATTACTTCTTTATGTTTCCCCTTGTAGGTTCACGAGCGCAAAGACACTGGAGAAGTTAACGTCCTTACAAAAGGTATTTGTTTATGATGCATATTAGGTTAGAAGTCAAGAATGTATTGTATAGATCCCTTCCGCGCTCTTTCTCTCCCTCTCTCTCTGCATTGAGAGTCGGTTATCATAAATTTATTACAATTCATAAGGTGCTCATCAATCATTTCATAGTTTTTTATTTAATGAAAAAGTTTTACTTCAGACAATAATCTTCTGCTTGTTTGTTTGTACTGATCAACTGAGAAAGCCTTCTGTTATTTGCTTGTCCCCTAATTATTGTTAAGCAAGGTTTTATGGTTCTTACTCCTCAATAATGACTACTAATTTTCTTTGCTGTATATGATTCAAATCTTTAGGAGACAACAACTTTGGTGATGACAGACTTCTATATGCTCAAGGTCAACTCTGGCTGCAACGTCATCACATCATGGGGAGAGCTGTTGGGTGAGTTGACAGTTAGATCTGCTCTTTAGATCTTTGCTTTCTCGTTTCTTGAGGTCCTCTGCTTAAGAGACCCATCAGCAATTGTTAGGTTGTGAGGTCTTACAGTGGTGTTGCCTTGGCTCTCATTCCCTTCTATGCTTTATCTTATTTGAATATGCACCACTTCCTTTCGATTCTACTCTATGCAATATTGCAAACTCCAACAACTAATCCATTATAAATATGCAGAATTCATATTGTTAATCATTTTCCATTGGAAGATCCTCCACGTAAAGTAAAATTTTCACAGAAGTTGTCATTTTTTATACCACTATTTCCATGCTAGGGAAGTTTCATGAATTTGTTGACACTCGAGAAAGAATTGAAGTTTTCACTCGTATCTCTCCTTTTTTTCATTCTTTTTATAGTACTACTTTTATTTTCAGTACTTCTTTTTCTTCAATATTTCCATCATAGCTTTCAAACCTGTTCTGGAAAACGTTTTGTCTTCAGGCGAGTGTCTATTGGAAACAACCTCTCTACCTCACAGAGGTAGGGGTAAGGTCTGGTCTACGTACGCCCAACCCTCCCCAGACCCCACTTGTGCGAGTATATTCAGAATATGTTAATTGTATTCAGCCCCCCTTTGTGTGTTACCTATTTGTTCCTTGAATGCTGAACGACTTGCTTGTTAATTTCAGGTTCTTGCCTTATGTTGGTTGGGTAACGATAATCATGACCGAAAAACCAATTATCAAGGTTTGTTGTCTATTGAACTTCTAATTCTGCTTTTACATTAGTGCTTTATAAGGTTAACTATCTAGGTGATATGGAATTCAAATGCTAAGACTTTTTTTTCCTTTCTTCTTATTGCAGTATATATTGATAGGTGCATTGGGATTGTTGGTCATCACATCAAAAGATTAGTGGACAATGGCTTCCTTCAGTATGACTGGCACAAAATTAGAGAGAAACTATGTATCTGCCATTTTCAAGAATCATGACTCATTTTTGGACTAATAGAATCCTCTTTCT</genome_strand>
        <mrna_strand>AACAGAGAAGAAAACAGAGAGACGCAAAAATGGGATGGATCGGAGAGCAAATCGATTCGATAAAGTCAATTCAGTACAGACAACTCGTAACTCAAGCAATCAGTCTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGATGATTGTTACGTCAGCACTTATAATATGGAAAGCATTGATGTGTGTAACTGGCAGCGAGTCACCTGTGGTGGTTGTGCTCTCTGGAAGTATGGAACCAGGCTTTAAAAGG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTGACATTCTTTTCTTGCATATGAGCAAGGACCCTATTCGTGCGGGAGAAATTGTTGTGTTTAATGTTGAT..................................................................................................................................................................................................................................................................................................................................................................................................GGACGTGAAATTCCAATTGTTCATAGAGTAATAAAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCACGAGCGCAAAGACACTGGAGAAGTTAACGTCCTTACAAAAG..............................................................................................................................................................................................................................................................................................................................................GAGACAACAACTTTGGTGATGACAGACTTCTATATGCTCAAGGTCAACTCTGGCTGCAACGTCATCACATCATGGGGAGAGCTGTTGG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGCCTTATGTTGGTTGGGTAACGATAATCATGACCGAAAAACCAATTATCAAG.....................................................................................................................TATATATTGATAGGTGCATTGGGATTGTTGGTCATCACATCAAAAGATTAGTGGACAATGGCTTCCTTCAGTATGACTGGCACAAAATTAGAGAGAAACTATGTATCTGCCATTTTCAAGAATCATGACTCATTTTTGGACTAATAGAATCCTCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U314335" ref_strand="+" ref_description="SGN-U314335        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | beta-amyrin synthase, putative, similar to beta-Amyrin Synthase GI:3688600 from (Panax ginseng) and GI:8918271 from (Pisum sativum) | chr1:29689330-29693566 REVERSE | Aliases: YUP8H12R.44, YUP8H12R_44(evalue: 0, score=768) genbank/nr: gi|3688600|dbj|BAA33461.1| beta-Amyrin Synthase [Panax ginseng](evalue: 0, score=855)">
      <seq>aggcacctctcattttgcaactaagggaagagttatatgatcgaccatacgatgaaattaactggaagaaagtgcgccatgtatgtgcaaaggaggatctttattaccctcatccattggttcaagatttgatgtgggatagtctctacatatgtaccgagcctttgttgacccgttggcctttcaacaagctgagaaacaaagctcttgaagttaccatgaaacacatacactatgaagacgagaatagtcgatacatcaccatcggatgtgtcgaaaaagtattgtgcatgcttgcttgttgggtcgaggatcctaacggcgattatttcaaaaaacatcttgctaggatccctgattatttatgggtagctgaagatggaatgaaaatgcagagtttcggtagtcaagaatgggatactggttttgctatccaagcactattggccagtgagatgaatgatgagatagcagatacgcttagaaaaggacatgactttataaaacaatctcaggtgacgaacaatccgtctggtgatttcaaaggaatgtatcgacatatctcaaaaggatcatggactttttcagatcaagatcatggatggcaagtctctgattgcactgctgaagcattaaagtgctgccttctgttgtctacaatgcctcgtgaattagtcggtcaggcaatggagccagggcgattgtatgactcggtgaatgttattctttcattacagagcaaaaatggcggtttagcagcatgggaacctgcaggagcctccgagtatttggagctgctgaatcctactgaatttttcgcggacattgtcattgagcacgagtacgtcgaatgcactgcctcatcaattcaagcacttgttctgtttaagaagctgtatcccggacacagaaccaaggagattaacatattcattgataatgctgttaaatatcttgaagatgtacaaatgcctgatggttcatggtatggtaactggggtgtttgcttcacatatggttcctggtttgctcttgaagggcttgttgcagcaggcaagtcctacaacaactctgcagctgttcgtaaaggcgttgaatttctgctaagaacacaaagatccgatggtggttggggcgaaagctaccgttcttgcccagacaaggtatatagagaactcgaaacaaatgactcaaatcttgtacaaactgcatgggcattgatgggattgattcactctggacaggctgatagagatccgaaaccccttcaccgtgcagcaaagttgttgatcaattctcagatggaagatggtgacttcccacagcaggaaattactggagtttttatgaagaattgcatgttgcattatgcagcatacagaaatatatatccattatggggtttggctgaataccgcaaaaatgtattattaccattagaaaacaactaaatatatataatttttcgatatagagtgcaatttggtcctttttttttttggtgttaatgtgagtgatgtaacaaaagtaaaaattcatagcctaagttaattttattattttgtattacataatttgtgaataaagaaagttacata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="13063" stop="8955"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12766" g_stop="12675" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="92" r_length="92" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12674" i_stop="12517" i_length="158">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12516" g_stop="12328" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="281" r_length="189" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12327" i_stop="12230" i_length="98">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12229" g_stop="12116" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="282" r_stop="395" r_length="114" r_score="0.991"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="12115" i_stop="12020" i_length="96">
            <donor d_prob="0.937" d_score="0.98"/>
            <acceptor a_prob="0.392" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="12019" g_stop="11900" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="515" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="11899" i_stop="11819" i_length="81">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.569" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11818" g_stop="11696" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="516" r_stop="638" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="11695" i_stop="11600" i_length="96">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="11599" g_stop="11501" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="639" r_stop="737" r_length="99" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="11500" i_stop="11376" i_length="125">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="11375" g_stop="11319" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="738" r_stop="794" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="11318" i_stop="11226" i_length="93">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="11225" g_stop="11179" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="795" r_stop="841" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="11178" i_stop="11095" i_length="84">
            <donor d_prob="0.962" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="11094" g_stop="10951" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="842" r_stop="985" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="10950" i_stop="10870" i_length="81">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="10869" g_stop="10692" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="986" r_stop="1163" r_length="178" r_score="0.994"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="10691" i_stop="10243" i_length="449">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="10242" g_stop="10078" g_length="165"/>
          <reference_exon_boundary r_type="cDNA" r_start="1164" r_stop="1328" r_length="165" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="10077" i_stop="9525" i_length="553">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="9524" g_stop="9255" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1329" r_stop="1598" r_length="270" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U314335" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1598</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U314335" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12766" e_stop="12675"/>
          <exon e_start="12516" e_stop="12328"/>
          <exon e_start="12229" e_stop="12116"/>
          <exon e_start="12019" e_stop="11900"/>
          <exon e_start="11818" e_stop="11696"/>
          <exon e_start="11599" e_stop="11501"/>
          <exon e_start="11375" e_stop="11319"/>
          <exon e_start="11225" e_stop="11179"/>
          <exon e_start="11094" e_stop="10951"/>
          <exon e_start="10869" e_stop="10692"/>
          <exon e_start="10242" e_stop="10078"/>
          <exon e_start="9524" e_stop="9255"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCACGCCTCTCATTTTGCAACTAAGGGAAGAGTTATATGATCGACCATACGATGAAATTAACTGGAAGAAAGTGCGCCATGTATGTGCAAAGGTATGATTATCAAAGGTCGTTTGATTACCGACATAAAGTTTGGTAGTATTTATCCCTGTATAGCTTTGTTTACGAACCAAACGAGTCCTCAGTTTTGAAGTTAGTATCTACATTATACCATCTTCTACGAATGCTCAAACACAAACTTGTTGCTGCAGGAGGATCTTTATTACCCTCATCCGTTGGTTCAAGATTTGATGTGGGATAGTCTCTACATATGTACCGAGCCTTTGTTGACCCGTTGGCCTTTCAACAAGCTGAGAAACAAAGCTCTTGAAGTTACCATGAAACACATACACTATGAAGACGAGAATAGTCGATACATCACCATCGGATGTGTCGAAAAAGTATGGCAACTTAATCATTTTGAACAGATTACAGAATTACCTGCATTTTGTTAATGACTTCTTTTGTTAGACACTGATGAAACACTTGGATGGTGTAGGTATTGTGCATGCTTGCTTGTTGGGTCGAGGATCCTAACGGCGATTATTTCAAAAAACATCTTGCTAGGATCTCTGATTATTTATGGGTAGCTGAAGATGGAATGAAAATGCAGGTCTGTAAATCTGAATTGTACTATTTGACAAACCAGAATAAGCAAGAATAGGATATGTTGTTACTGAATAGGCGACAATTTGTCGTTGAATTTCAGAGTTTCGGTAGTCAAGAATGGGATACTGGTTTTGCTATCCAAGCACTATTGGCCAGTGAGATGAATGATGAGATAGCAGATACGCTTAGAAAAGGACATGACTTTATAAAACAATCTCAGGTTTGGATATTTAATTATTAAGAACTTTGTTCTAATGTTTTCGTTTCAACTAAGTCTTACAGTGTGAGAGTCTTCTCGTAGGTGACGAACAATCCGTCTGGTGATTTCAAAGGAATGTATCGACATATCTCAAAAGGATCATGGACTTTTTCAGATCAAGATCATGGATGGCAAGTCTCTGATTGCACTGCTGAAGCATTAAAGGTATCTCAAAGTTCAATTTCTTGAAATTTGCTGACAAATGGTAAGATGATGGCTAGAAAGTTTGCCTAATTTTTCGTTTAACTTTTGTTTGTCTAGTGCTGCCTTCTGTTGTCTACAATGCCTCGTGAATTAGTCGGTCAGGCAATGGAGCCAGGGCGATTGTATGACTCGGTGAATGTTATTCTTTCATTACAGGTAAACACTGAAAGATGTGCCCTCAAATCATTAATCACTGAAGTTGTTTTCTGCTTTTGCAAAAAAATTCAAGAGAAACCTATATCTTGAAGTTATAATAAGATCCATTTTAAATATAATCGCAGAGCAAAAATGGCGGTTTAGCAGCATGGGAACCTGCAGGAGCCTCCGAGTATTTGGAGGTAACACAATATTCCTATTTCCATGATTTGTCTCAACGTTGTTAAAAACCTTCAACCATTTTAACTTTCTTGTTCTGTTTTATTCACTGACAGCTGCTGAATCCTACTGAATTTTTCGCGGACATTGTCATTGAGCACGAGTATGATCACTATAGTTCCTCTCTCTTTCCCTTTTCTTGTTAGTCTCCGTTTTACAGCTTGACACTGATTAAATGTCAATCCAGGTACGTCGAATGCACTGCCTCATCAATTCAAGCACTTGTTCTGTTTAAGAAGCTGTATCCCGGACACAGAACCAAGGAGATTAACATATTCATTGATAATGCTGTTAAATATCTTGAAGATGTACAAATGCCTGATGGTTCATGGTATATTATATTTCTTTTCCGAGTTCTTGAACTTACTACAAATAGCTCGATAACATATGACATGAGTAATCATGTTAACAGGTATGGTAACTGGGGTGTTTGCTTCACATATGGTTCCTGGTTTGCTCTTGGAGGGCTTGTTGCAGCAGGCAAGTCCTACAACAACTCTGCAGCTGTTCGTAAAGGCGTTGAATTTCTGCTAAGAACACAAAGATCCGATGGTGGTTGGGGCGAAAGCTACCGTTCTTGCCCAGACAAGGTAAAGTAAAAGTAAAGGTCCTTTCTCAGGACTTCTCTGTCAGCACGTTTGAGTTATCTGCATCTAAAGTCTGATGCATTGTTTTTAAATTCCACACCCCTTTCCCCGTTAAAGAATGACAATAACAACAACAATGTCTCGATCTTTACATAGTTAGGATCGGATATTTTAGGTAAGATACATCCTCTTCATTTCAAACCATTTCATTCCAATATGCAAGCTAACACTGAAGGTTCTCAATACGAAGATAGACACTTTAACTTGGCCTCAACTGGCAACTGAACACTCCTAATTTGAGTATGCACGCCACACCTCAACTCGACTCCACTATACTAGAGGAACATTCCAACTTAGAAAATGATCACGTAGACATCTACATTACGAATTTCTAGTTAGATGTGTACTGTCGAAAAGCCACTGTGACTGAGTTTTGTTTTTGATCAAAACAGGTATATAGAGAACTCGAAACAAATGACTCAAATCTTGTACAAACTGCATGGGCATTGATGGGATTGATTCACTCTGGACAGGCTGATAGAGATCCGAAACCCCTTCACCGTGCAGCAAAGTTGTTGATCAATTCTCAGATGGAAGATGGTGACTTCCCACAGCAGGTAATCACTCTGTAAATTACAAGCCAAACGGATAGAAGATTCATATAGTTGATACAAACTAGTTAAAGACTGAGTTGTGTTTGATTGATACTGATTGTTAAAGCGAAAAAAGCTCTTTCAATTTACCAAAAAATATACGTAAGAAAATAGACATTACTCTCCTCGTCCTATTTTATGCGACACATTTTGACTGGACACGAGCTTAAGAAAGTAAGAAATACTTCTAAAACCTGTTCTCTAAGAAACAAAATTTGTGTTTCTTTTAATCATCTCATTAGTAACAAAAAACAATAGAAAATTTAAAGCTAAATCGTTTCTAAATATAGAAATGAATCATTCTTTTTGGAACAGACTGAAAAGGAAGCATGGAATATGAAGTCAGTTTTATCATTGTCTAATGTGATGTGTGAATTAGGCGTACGTCACAAAACTCTATTATAGACAAAATTGTACCCCATTGGCTCTCGAGAATTTCTCGATTATATATAAAAAAATAGTTTTATTATCAAAATTTTTTTATTATCTGATTTTTTTGTAATACATATATGTGCAGGAAATTACTGGAGTTTTTATGAAGAATTGCATGTTGCATTATGCAGCATACAGAAATATATATCCATTATGGGGTTTGGCTGAATACCGCAAAAATGTATTATTACCATTAGAAAACAACTAAATATATATAATTTTTCGATATAGAGTGCAATTTGGTCCTTTTTTTTTTTGGTGTTAATGTGAGTGATGTAACAAAAGTAAAAATTCATAGCCTAAGTTAATTTTATTATTTTGTATTACATAATTTGTGAATAAAGAAAGTTACATA</genome_strand>
        <mrna_strand>AGGCACCTCTCATTTTGCAACTAAGGGAAGAGTTATATGATCGACCATACGATGAAATTAACTGGAAGAAAGTGCGCCATGTATGTGCAAAG..............................................................................................................................................................GAGGATCTTTATTACCCTCATCCATTGGTTCAAGATTTGATGTGGGATAGTCTCTACATATGTACCGAGCCTTTGTTGACCCGTTGGCCTTTCAACAAGCTGAGAAACAAAGCTCTTGAAGTTACCATGAAACACATACACTATGAAGACGAGAATAGTCGATACATCACCATCGGATGTGTCGAAAAA..................................................................................................GTATTGTGCATGCTTGCTTGTTGGGTCGAGGATCCTAACGGCGATTATTTCAAAAAACATCTTGCTAGGATCCCTGATTATTTATGGGTAGCTGAAGATGGAATGAAAATGCAG................................................................................................AGTTTCGGTAGTCAAGAATGGGATACTGGTTTTGCTATCCAAGCACTATTGGCCAGTGAGATGAATGATGAGATAGCAGATACGCTTAGAAAAGGACATGACTTTATAAAACAATCTCAG.................................................................................GTGACGAACAATCCGTCTGGTGATTTCAAAGGAATGTATCGACATATCTCAAAAGGATCATGGACTTTTTCAGATCAAGATCATGGATGGCAAGTCTCTGATTGCACTGCTGAAGCATTAAAG................................................................................................TGCTGCCTTCTGTTGTCTACAATGCCTCGTGAATTAGTCGGTCAGGCAATGGAGCCAGGGCGATTGTATGACTCGGTGAATGTTATTCTTTCATTACAG.............................................................................................................................AGCAAAAATGGCGGTTTAGCAGCATGGGAACCTGCAGGAGCCTCCGAGTATTTGGAG.............................................................................................CTGCTGAATCCTACTGAATTTTTCGCGGACATTGTCATTGAGCACGA....................................................................................GTACGTCGAATGCACTGCCTCATCAATTCAAGCACTTGTTCTGTTTAAGAAGCTGTATCCCGGACACAGAACCAAGGAGATTAACATATTCATTGATAATGCTGTTAAATATCTTGAAGATGTACAAATGCCTGATGGTTCATG.................................................................................GTATGGTAACTGGGGTGTTTGCTTCACATATGGTTCCTGGTTTGCTCTTGAAGGGCTTGTTGCAGCAGGCAAGTCCTACAACAACTCTGCAGCTGTTCGTAAAGGCGTTGAATTTCTGCTAAGAACACAAAGATCCGATGGTGGTTGGGGCGAAAGCTACCGTTCTTGCCCAGACAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATATAGAGAACTCGAAACAAATGACTCAAATCTTGTACAAACTGCATGGGCATTGATGGGATTGATTCACTCTGGACAGGCTGATAGAGATCCGAAACCCCTTCACCGTGCAGCAAAGTTGTTGATCAATTCTCAGATGGAAGATGGTGACTTCCCACAGCAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATTACTGGAGTTTTTATGAAGAATTGCATGTTGCATTATGCAGCATACAGAAATATATATCCATTATGGGGTTTGGCTGAATACCGCAAAAATGTATTATTACCATTAGAAAACAACTAAATATATATAATTTTTCGATATAGAGTGCAATTTGGTCCTTTTTTTTTTTGGTGTTAATGTGAGTGATGTAACAAAAGTAAAAATTCATAGCCTAAGTTAATTTTATTATTTTGTATTACATAATTTGTGAATAAAGAAAGTTACATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342203" ref_strand="+" ref_description="SGN-U342203        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | beta-amyrin synthase, putative, similar to beta-Amyrin Synthase GI:3688600 from (Panax ginseng) and GI:8918271 from (Pisum sativum) | chr1:29694046-29699148 REVERSE | Aliases: None(evalue: 6e-38, score=139) genbank/nr: gi|73991374|dbj|BAE43642.1| beta-amyrin synthase [Euphorbia tirucalli] (evalue: 3e-39, score=153)">
      <seq>cgaattttttgaccttgcttataccaaactttataatcctacttttaaatatatttttttgttattgctttatacccaaattcctccaatttaaatactataatgagtctttaacataaaaaaataaaataaagttcatccgaatttattgttcattccctttataccttacacactttcagcataaactccctcttattatttaagtaaaatttcactcattttatttcctatctccaacaactctacatataattatcctagtaaggatatatgcaattttcccttcttcattacttttttttttttatcaagtcttcgaaaacaacttctctatcgggtaaaaacaaataaaatacttaagggcaacatatatttcaaatttcaaatattttattgttgagggggaaaactttaaaatttctttcaaactttcaattaaaggatgtgaaaattaaaaattgctaaagggcaaaagggcccatatttgtatagaacaaataactatgttgaacaacaaacgtggaatttcaatccaaatggggaaacaataaaaaaacgggctaaaataaaaaaggctcgccaacaattttgaaataatcgttataaagtcaaccctagtagtgatcttctttggcgaatacattttcttgaaaaaaaaaatttcaaacaaaaatttccaccattaaaatttaaaaaaggtaaaaaaattacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="18096" stop="14246"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17798" g_stop="17152" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="646" r_length="646" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17151" i_stop="14615" i_length="2537">
            <donor d_prob="0.990" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="0.84"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="14614" g_stop="14546" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="715" r_length="69" r_score="0.826"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U342203" ref_strand="+">
        <total_alignment_score>0.913</total_alignment_score>
        <cumulative_length_of_scored_exons>716</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U342203" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17798" e_stop="17152"/>
          <exon e_start="14614" e_stop="14546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATTTTTTGACCTTGCTTATACCAAACTTTATAATCCTACTTTTAAATATATTTTTTTGTTATTGCTTTATACCCAAATTCCTCCAATTTAAATACTATAATGAGTCTTTAACATAAAAAAATAAAATAAAGTTCATCCGAATTTATTGTTCATTCCCTTTATACCTTACACACTTTCAGCATAAACTCCCTCTTATTATTTAAGTAAAATTTCACTCATTTTATTTCCTATCTCCAACAACTCTACATATAATTATCCTAGTAAGTATATATGCAATTTTCCCTTCTTCATTACTTTTTTTTTTTTTATCGAGTCTTCTGAAACGATTTCTCTATCGTGTAAAGACAGATAAAATACGTAAGGGCAACATATATTTCAAATTTCATATATTTTATTGTTGAGGTGGTAGACGTTAAGAGTTCATTCGAACATTCGATTAAAGGATGTGGAAATTGAAAATTGCTGAAGGGCAAAATGGTCCATATTTGTATAGTACAAATAACTATGTTGGAAGACAAACGTGGGAGTTCGATCCAAATGGTGGAACGATAGAAGAACGGGCTAAGATAGAAGAGGCTCGAAAACAATTTTGGAATAATCGTTATAAAGTCAAGCCTAGTAGTGATCTTCTTTGGCGGATACAGGTAAATATATCGACTCATTTCAATCTTTATTGAAGAGATTATGATCCCAAGGTCTCTTACTTCATTCAAAAAAGTCTTTTTTGTGGACCAGTTGTTAGAGGTCATAAAGGATCGTTACTCTATTCTACACAGTGTATTATTATCAAAGGAAAATTGCATATAATAGCAAAGTAATAACCTACAATAAATGGAGTAGCTAGGGTTTGAGTTAATTGTGAGGCGCTTCTCTCCCAAATATCTCGCTCGCCACTCTCCTCCAATCTCTCGCTCGCTTCCTCACTTTTTATACAAACACAAGTGTGTAAAAATTGTTTCTAATTGTATAAAGCAGAGAAAATTGTATAAATACATATATTTTTGTTCCCCCTCTCTCCTCTTCCAGATCTCGCTCGCCACTCTCCCAAAATCTCGCTCGCCACCCTCGCCTTTCTCACTTATACAAACACAAAGCGAAATGTATAAATTGTGTTTTTGTTTGTATAAAGCGTGAGAAAATTGTATATACACATGCAAGTACATATATTTTCATCCTATACACTTATAACTATACAATAAAAATACTCCCATGTCCAGTTTCTTTTGCATTTTTTTTTCGTTTATACAATTTTCAAATTGTATCTAATTTCTCTCTTTCTCGTTTTATACAATTCGATTCAATTGTATATTCCTTGTCAAGTCTCTTTTGTCTTTCTCTCTTTCTCATTTTATACAAATTCAAATTATATATAATCGTTCTATACACTTATAATAATACAATTCATTTTATACACTTCATTTTTATACAGTTCTCTGCCCAAGTGTCTTTCTCTTTCTTATTTTATACACTTCGTTTTATATAATATGCTTCAACTTTGAAGACTTTTTCAAAAGTTTTTAGCAAAAAAAAAAAGCAAAAACAAAGGTTCTGCTGCTATCGACACCTACCCGATTAACCAAAAATATAATCGATCGAGACCAAAACTTATATTTACTATAGAACGCAATTATATAATTTTGCTATAATATACAAATATAAACTTTTTATTTGTTATACGCTGAAATTTGTCCTATTATCAATTCTACCTGACAACATCTACCTACACAAGAGAATTAAATTGATGACATGACTTGTTTTTCATATTCTATATTTATGTCCTAAATTAAATCATTAAAAGTGGGTGGGTGGGGGTGGGGTATATGAAAAAGGTGTCCAATTAAGACTTGAAAGACAAGAGAGAAAAGACCAAAAAAATAGTCTATTAGAGGAAGACCCTAATATACTTTGTGGATTAGTATATAACAACAACAAAAATATAACACTCCCTCCGTCACAAAGAATGATCTGGTTTAAGTTGGTACGGAGTTTAAGAATATGAAGAAAGATTTTTTAATTTTGTGGTCATAAATTAAAGTTAGATCAAATATACAAAATTATTTTTTGATATTGTGGTCTTAAATATATCACGTGGAAAGCTCAAATTAAAATGTTACAAAAAAAAGATGTCATTTTTTTTAAAATAGACTAAAAAAGAAAGGAAATCATTCTTTTTGAAACGGAGAGAGTATAGACCAACAACAATAATAAATACGCTTATAGTTGGAATTCATCCCTCCTTAATTATTTATTTTGAGTTCAAGCTGAAACTGAGTCATCTGTTAATTCGAAGGGTGGTCATTCGTAGATCATTCCCCCTTCAAAGTCGTCTAAGTTAAACCTGTTACATATGATTTGTCTAATACAATTTACATTTCTAATGTGATTTTCAGGTTATTACACGATAAAGAGTTTATCCTAAATACACAAAGTGACAGAAATTACAAATTATACTGAAGCTTCAAATAAAAAACAATCTTTATAACACACGAACCTAAATATAATAGAGCCACAGGGAAAAAAAGTCCTAGTGTTCGATATCATCGAATGTTTGACTTCAAGTAGTGATTATTATTTAATAAAATTAAATAGAGTTGGAAGAGTCAACAACATGTTTTTATCATTCATTTTTTTTTATATAAAATATAGAGAAAAAGAATGGTCACCACTTGTTGATATCACTTTTTACTTTTATTAAATATTTTATTAATAATGTAAAAAGAAATTCTCATATAATTTTATTCGAGCAATTACAAATGATAACTCATAGTAAGTGAAATTACTAACAAAAAAAAAAGTAAAATAATTATCTATAGCATATTCAATTGAAAGGTAATTACATATAACTATTCATAAAAAATAAAATTAGTAATCTAAAAACTGTTAGAATCGAATTCACACACTGAATAAAAAACACAAGAACTTTAGAGAGAATAAGATGAAAGATCTAGAGAGAAAAAGAGAGAAACCAATATTTCGCGGTAACACCCAGTGAGTAAACTTTCACGGCGGTGTGGTATATATATATTAATAAATCAGAGTATTTTTGGTTACAGAGAATAAATGAAGAATAAATAGTACATTAAATATTAATCAGGCTCTACAACCTAACAAAAACTAAGTAAATTAATCTTTTTTTTAGCAAATTAAATTTCACTCACTTTTTTTAAAATTTTTTTTACAGTTTCTTGGAGAGAAAAATTTCAAACAAAAAATTCCAGCAGTAAAAGTTGAAGAAGGTGAAGAAATTAGC</genome_strand>
        <mrna_strand>CGAATTTTTTGACCTTGCTTATACCAAACTTTATAATCCTACTTTTAAATATATTTTTTTGTTATTGCTTTATACCCAAATTCCTCCAATTTAAATACTATAATGAGTCTTTAACATAAAAAAATAAAATAAAGTTCATCCGAATTTATTGTTCATTCCCTTTATACCTTACACACTTTCAGCATAAACTCCCTCTTATTATTTAAGTAAAATTTCACTCATTTTATTTCCTATCTCCAACAACTCTACATATAATTATCCTAGTAAGGATATATGCAATTTTCCCTTCTTCATTAC-TTTTTTTTTTTTATCAAGTCTTCGAAAACAACTTCTCTATCGGGTAAAAACAAATAAAATACTTAAGGGCAACATATATTTCAAATTTCAAATATTTTATTGTTGAGGGGGAAAACTTTAAAATTTCTTTCAAACTTTCAATTAAAGGATGTGAAAATTAAAAATTGCTAAAGGGCAAAAGGGCCCATATTTGTATAGAACAAATAACTATGTTGAACAACAAACGTGGAATTTCAATCCAAATGGGGAAACAATAAAAAAACGGGCTAAAATAAAAAAGGCTCGCCAACAATTTTGAAATAATCGTTATAAAGTCAACCCTAGTAGTGATCTTCTTTGGCGAATACAT.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCTTGAAAAAAAAAATTTCAAACAAAAATTTCCACCATTAAAATTTAAAAAAGGTAAAAAAATTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330521" ref_strand="+" ref_description="SGN-U330521        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | beta-amyrin synthase, putative, similar to beta-Amyrin Synthase GI:3688600 from (Panax ginseng) and GI:8918271 from (Pisum sativum) | chr1:29694046-29699148 REVERSE | Aliases: None(evalue: 1e-18, score=89) genbank/nr: gi|18147596|dbj|BAB83088.1| beta-amyrin synthase [Betula platyphylla](evalue: 3e-18, score=93.6)">
      <seq>gctgttaattaattctcagacggaagatggtgacttcccacaacaggagataactggtgttttctcgaggaattgcatgatacactatgcatcatatagaaatatatttccattgtggggtttggctgaataccgcagaaatgtcttagtaccattaaaacacaactacatatagagaatgcaatttaggccttccgcggattccatgtatagcggtagcttagtgaatcgagttgtccgttgtttgtttgttgttttaatgtaagtgatcacccaagtagtggttagatatgactatgatcgacccttaatcaaatggttcgggttcgagcctcgaggatggaaagaatcttgatatgatatgcttcctcctttagggttctacataggggatctacatgaatccaatgtatacattactcatgaatctactaaatatctattgatatttgtttgtaagctcaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="24303" stop="21963"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24003" g_stop="23958" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23957" i_stop="22927" i_length="1031">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22926" g_stop="22671" g_length="256"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="302" r_length="256" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22670" i_stop="22426" i_length="245">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22425" g_stop="22264" g_length="162"/>
          <reference_exon_boundary r_type="cDNA" r_start="303" r_stop="464" r_length="162" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="465" polyA_stop="478"/>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U330521" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>464</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330521" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24003" e_stop="23958"/>
          <exon e_start="22926" e_stop="22671"/>
          <exon e_start="22425" e_stop="22264"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTGTTAATTAATTCTCAGATGGAAGATGGTGACTTCCCACAACAGGTAATTACTCCACGAATTTATCTGTGTTCAGTATTTGGATGAATTTAAACGAAACGAACATAGATGATTCATATATATAGTCTGACTGGAACTAGTTTAGAATCTAGTCGTATTTGATTGATATTGATTAATAAATATAAAGAAACAAGCTCTATCAAACTGGCAAAACTGATACAATACGTGCGTCCACTATCAGTCAACGCACCAGGTCCCTTGACACACTCAAAATAAGAATGAAGAGTAAATAATGACAGAAAACAACACAAGAAGTTTACGTGGAAACGTCCTTGCTCAAGGGAGTAAAATCACGATCTGTCACACAGGATTTTCAACGGTCTTCACTAATCTTCACAAACAAAAGTGAAACCCGATTTGCTTGAAGAGCCTTAGCAGATGACACTCTGTCCACTAAGATATCACCACTAGACAACTTAGGATTCAACTAAGCAACATGCAGGTTGCTCACTAAATCACCATGCTCCGGATGACTTAGAGTTTAACTAAGCAACACACAAGGCTGCCCACTAAATTAGTTGGACTCACCTAATTTAGACTTTTTCAACAAACCAAAATATCTGAATCCTTTATACATTTCGAAACAGATTTACAATGCATGTGCAGAAATAATCCTAAGACAACTAACCTTCCAGCTCTTTCCGATTCGAGTTGATCTTAAGGATGCTTCTTCACTTCTTTTGTCAGCCTTGCAAGAGTTCTTGAGATGTTTTTCAAGTTGCAAAAACTAAGGTTGTGACTATTGGAACATCATCTTTATGTAGAATAGTCACAAAACCATGTCATTGGCCGAGGTTTCTGCCACTATTGGATTTGTGCACCAACTTTTTGTATTTTTTCCAACCTGACAGTTTGTGTGTATATTTCCACTCGGGGGCATGTCTCTTTACGAGGTCCCTGAGTTTGTTATATCATCAAAACTACAAATAACAAAAACAATATTTAATAGAACAGAGATTTGTTAAAACCAGTTTTATCAAATTATTGTTTTTATCTAACTTTATAAATATGTGCAGGAGATAACTGGTGTTTTCTTGAGGAATTGCATGATGCACTATGCATTATATAGGAATATATTTCCATTGTGGGGTTTGGCTGAATACCGCAGGAATGTCTTAGTACCATTAAAACACAACTACATATAGAGAATGCAATTTGGGCCTTCCGCGGATTCCGTATATAGCGGGAGCTTAGTGAATCGAGTTGTCCGTTGTTTGTTTTTTGTGTTAATGTAAGTGATCACCCAAGTAGTGGTTAGATATGACTATGATCGACCTGTTAGGTTGTGGAGCCTGATTAATATTTGTTATACTGCAATATTTATTCTCCATTTATTCTCTATAACCTAAAATACTCTGAATTATTAATATATATACCCACCGCCGTGGAAGTTTACTCACGGGGTGTTACCACGAAATATTGGTTTCTCTCTTTCTCTCTCTAGATCTCTCATCTCTTTCTCTTGAAAGTTCTTGTGTTCTAAATTCATCATGTGTGTGTGGATTCAATGCTAATACGACCCTTAATCAAATGGTTCGGATTCGAGCCTCGAGGATGGAAAGAATCTTGATATGATATGCTTCCTCCTTTAGGGTTCTACATAGGGGATCTACATGAATCCAATGTATACATTACTCATGAATCTACTAAACATCTATTGATATTTGTTTGTAAGCTCA</genome_strand>
        <mrna_strand>GCTGTTAATTAATTCTCAGACGGAAGATGGTGACTTCCCACAACAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATAACTGGTGTTTTCTCGAGGAATTGCATGATACACTATGCATCATATAGAAATATATTTCCATTGTGGGGTTTGGCTGAATACCGCAGAAATGTCTTAGTACCATTAAAACACAACTACATATAGAGAATGCAATTTAGGCCTTCCGCGGATTCCATGTATAGCGGTAGCTTAGTGAATCGAGTTGTCCGTTGTTTGTTTGTTGTTTTAATGTAAGTGATCACCCAAGTAGTGGTTAGATATGACTATGATC.....................................................................................................................................................................................................................................................GACCCTTAATCAAATGGTTCGGGTTCGAGCCTCGAGGATGGAAAGAATCTTGATATGATATGCTTCCTCCTTTAGGGTTCTACATAGGGGATCTACATGAATCCAATGTATACATTACTCATGAATCTACTAAATATCTATTGATATTTGTTTGTAAGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U338582" ref_strand="+" ref_description="SGN-U338582        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | beta-amyrin synthase, putative, similar to beta-Amyrin Synthase GI:3688600 from (Panax ginseng) and GI:8918271 from (Pisum sativum) | chr1:29689330-29693566 REVERSE | Aliases: YUP8H12R.44, YUP8H12R_44(evalue: 3e-152, score=357) genbank/nr: gi|18147596|dbj|BAB83088.1| beta-amyrin synthase [Betula platyphylla](evalue: 5e-164, score=389)">
      <seq>cggttgaacataggaaggaaattcttcgctatatatactgtcaccagaatgaagatggtggatgggggttgcatatagaaggtcacagtacaatgttttgtacagctctgagttatatttgcatgaggatccttggagaaggaccagacggtggcgaaagcaatgcgtgtgctagagcgaggaaatggattcttgatcatggtagtgttattgcgattccttcttcgggaaaaatatggctctcgattcttggagcttttgagtggttaggaaccaatccaattcctcctgagttttatattcttccttcttttcttcccatgcatccagtcgaatgttttacatgccactgtcttatctctatggtaagagatttgttggtccaatcacacctctcattttgcaattgagggaagagttatatgatcaaccatacaatgaaatcaactggaaaagagtacgccatctatgtgcaaaggaggatctctattaccctcatccactggttcaggatttgatgtgggacactctctactttttttacgagcctttattgactcgttggcctttcaacaagctgagaaataaagctcttgaggttacgatgaaacatcttcattatgaagacgagaatagtcgatacatcaccgttcaatgtgtcaataaagtactgtgtatgcttgcttgttgggttgaggatccaaatggcagttatttcaaaaaacatcttgctcgggttccagattatttatgggtagctgaagatgggatgaaaatgcagaatagcggtagtcaatcatgggatactagttttgctattcaagcactattggccagtgagatgaatgatgagatatcagatactcttagaaaaggacacgacttcataaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="40078" stop="37095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="39778" g_stop="39732" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="47" r_length="47" r_score="0.894"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="39731" i_stop="39357" i_length="375">
            <donor d_prob="0.975" d_score="0.89"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39356" g_stop="39159" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="48" r_stop="245" r_length="198" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39158" i_stop="38704" i_length="455">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="0.834" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="38703" g_stop="38619" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="246" r_stop="330" r_length="85" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="38618" i_stop="38427" i_length="192">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="38426" g_stop="38279" g_length="148"/>
          <reference_exon_boundary r_type="cDNA" r_start="331" r_stop="478" r_length="148" r_score="0.993"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="38278" i_stop="38097" i_length="182">
            <donor d_prob="0.738" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="38096" g_stop="37908" g_length="189"/>
          <reference_exon_boundary r_type="cDNA" r_start="479" r_stop="667" r_length="189" r_score="0.989"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="37907" i_stop="37811" i_length="97">
            <donor d_prob="0.975" d_score="0.98"/>
            <acceptor a_prob="0.979" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="37810" g_stop="37697" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="781" r_length="114" r_score="0.991"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="37696" i_stop="37507" i_length="190">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="37506" g_stop="37395" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="782" r_stop="893" r_length="112" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U338582" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>893</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U338582" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="39778" e_stop="39732"/>
          <exon e_start="39356" e_stop="39159"/>
          <exon e_start="38703" e_stop="38619"/>
          <exon e_start="38426" e_stop="38279"/>
          <exon e_start="38096" e_stop="37908"/>
          <exon e_start="37810" e_stop="37697"/>
          <exon e_start="37506" e_stop="37395"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCTGAACATCGAAAGGAAATTCTTCGTTATATATACTGTCACCAGGTATATGATTTAATGCATCAAATTCTTGGAATTTATGTTTTAAGTTGCCAGCATAATACATAAACGTGCTCTTTTAGTTCGGTTTTAGCTGAGCTTAGTGCGGCGAGTATGATATAAAGTTGAATAAGTATACAAACATTCTACGTGACAATTCGCATGACATATACTCGAACTAATGTGTGGCGTTCTACATGTATTATGGCACGTAGGATGTTTGTGTCCACTTGTTTGGTTTTATACAAGTTTAAGTGTCTATTTGTACACACTCAAAGTTGGAGGGCGTATATATCAGCTGATGCCAAGTTAAAATGCATATTTCTGTATTATGTCTTAAAAAAAAAGCTCTGAGTTACTGTGGAATTCTGTATTATTCAGAATGAAGATGGCGGATGGGGGTTGCATATAGAAGGTCACAGTACAATGTTTTGTACAGCTCTGAGTTATATTTGCATGAGGATCCTTGGAGAAGGACCAGACGGTGGCGAAAGAAATGCGTGTGCTAGAGCGAGGAAATGGATTCTTGATCATGGTAGCGTTACTGCGATTCCTTCTTCGGGGAAAATATGGCTCTCGGTATGATTAATTATCCTAGTAACTTTTTTAGAAGAATATATATACTATAGTAGGATTTAAGTTATATACACTTGTAGTGTACAAAATTTTTACAGTATCAATGTGTAATGTTTATTAATCTGTTTGAGTTTGATGGATTCAACGTTTAGGTTCTTATCATTGAACACATTGCATTTTTGAATTTATAGGTTCAAAACTTAGTAGTTTGCTTAAATTCTAGGGTCAAGAACATTAGGCTTGTTGAACTTATTCGTTATTTACTACATACATTCCTCTGCAATTATGGTGGATGGTTGGTTAATTGACGTTATCATTTAGATGACTTGATTCTGCGAAAGACACTATCTTTAAGGATATTTCACCCGGTACAACTGTATCACATATTCACAAGTTCTTCCGGTATAAAACTAGGAGCCAACAATATTGCTAATAAATCTTCCTTCTTATTCGTTCAGATTCTTGGAGCTTTTGAGTGGTTAGGAACCAATCCAATTCCTCCCGAGTTTTATATTCTTCCTTCTTTTCTTCCAATGCATCCAGGTAGGCCAATTTTTTTTATTGCTTTATGCATACACATCCTAAAATTGTCAGTTCATTTTGTTGTAAATATTAATTTTGAAGATTTGCTATGCAATGTTTTCTGGTTGTTTCTATCCTCTGTTAGTGTCGATATATTGATCTTCCAAGTATTTTGACTCTTAATTTAAATGTAGCAAAAATGTGGTGTTACAGTCGAATATTTTACATGCCACTGTCTTATCTCTATGGTAAGAGATTTGTTGGTCCAATCACACCTCTCATTTTGCAATTGAGGGAAGAGTTATATGATCAACCATACAATGAAATCAACTGGAAAAGAGTACGCCATCTATGTGCAAAGGTATGACTATCGAGGGTCGTTTGATTACTGATATTAGAAAAATAATCTCGACATAAATTTCGATATAATTTCTCCCTCTAAAACTTTGTCTACGGATCAAATGAGTCCCTAGTGTTGAAGTTAGTATAGATATCATACTATTTTCTACATATGATCAAAGACAAACAAACTTGTTGCTGCAGGAGGATCTCTATTACCCTCATCCACTGGTTCAGGACTTGATGTGGGACACTCTCTACTTTTTTTACGAGCCTTTATTGACTCGTTGGCCTTTCAACAAGCTGAGAAATAAAGCTCTTGAGGTTACGATGAAACATCTTCATTATGAAGACGAGAATAGTCGATACATCACTGTTCAATGTGTCAATAAAGTACGACAACTTTTTCATTTTTGATAGATTACAAAATACCTGCATTTTCTTAACAACTTCAATCGTTTGACACTTATGTTACACGTGTATGGTGTAGGTACTGTGTATGCTTGCTTGTTGGGTTGAGGATCCAAACGGCAGTTATTTCAAAAAACATCTTGCTCGGGTTCCAGATTATTTATGGGTAGCTGAAGATGGGATGAAAATGCAGGTTGGTAGATATAAATTATTTTCTATAAGCAAGGACATTATACTATTCCACGAACCACAATGATTTACGAAATAGGATCTCTTTTACACGTAATACATGTTTGTAAAATAGAAGGCTAGCTCCTTTTCCTATTGTGAAGTGATGCAAACAACTGTTACTGAAATTGCGGAGTTTTGTTGTTGAATTGCAGAATAGCGGTAGTCAATCATGGGATACTAGTTTTGCTATTCAAGCACTATTGGCCAGTGAGATGAACGATGAGATATCAGATACTCTTAGAAAAGGACACGACTTCATAAAAA</genome_strand>
        <mrna_strand>CGGTTGAACATAGGAAGGAAATTCTTCGCTATATATACTGTCACCAG.......................................................................................................................................................................................................................................................................................................................................................................................AATGAAGATGGTGGATGGGGGTTGCATATAGAAGGTCACAGTACAATGTTTTGTACAGCTCTGAGTTATATTTGCATGAGGATCCTTGGAGAAGGACCAGACGGTGGCGAAAGCAATGCGTGTGCTAGAGCGAGGAAATGGATTCTTGATCATGGTAGTGTTATTGCGATTCCTTCTTCGGGAAAAATATGGCTCTCG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCTTGGAGCTTTTGAGTGGTTAGGAACCAATCCAATTCCTCCTGAGTTTTATATTCTTCCTTCTTTTCTTCCCATGCATCCAG................................................................................................................................................................................................TCGAATGTTTTACATGCCACTGTCTTATCTCTATGGTAAGAGATTTGTTGGTCCAATCACACCTCTCATTTTGCAATTGAGGGAAGAGTTATATGATCAACCATACAATGAAATCAACTGGAAAAGAGTACGCCATCTATGTGCAAAG......................................................................................................................................................................................GAGGATCTCTATTACCCTCATCCACTGGTTCAGGATTTGATGTGGGACACTCTCTACTTTTTTTACGAGCCTTTATTGACTCGTTGGCCTTTCAACAAGCTGAGAAATAAAGCTCTTGAGGTTACGATGAAACATCTTCATTATGAAGACGAGAATAGTCGATACATCACCGTTCAATGTGTCAATAAA.................................................................................................GTACTGTGTATGCTTGCTTGTTGGGTTGAGGATCCAAATGGCAGTTATTTCAAAAAACATCTTGCTCGGGTTCCAGATTATTTATGGGTAGCTGAAGATGGGATGAAAATGCAG..............................................................................................................................................................................................AATAGCGGTAGTCAATCATGGGATACTAGTTTTGCTATTCAAGCACTATTGGCCAGTGAGATGAATGATGAGATATCAGATACTCTTAGAAAAGGACACGACTTCATAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330527" ref_strand="+" ref_description="SGN-U330527        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>attacaaccacgccaaattgcaggctcttaaggcgaatgaagcacagaagaaggcttcacaggctgctgatgaggaggctggaagattgttggaggaaagagaaggggagaatggtgctaagaagaatgagtctcagggttgagttgtttcttcgtttacttcgtattatccataggtagaatgacattgagagatgaaacctgaagatcagattataacgtccttgtgcggatgatttagcttctgtttttttaggtataaatcatttacattatctgttttgaggatcttataatagttttattgctcgtattaccttaccagatcgtgcatgtacttgagcatgactcgaggcaatttatgtttattttgacagaacagtaatactagaagagcttttactaatgaaagtaactgatgcagctaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="46762" stop="45732"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46462" g_stop="46043" g_length="420"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="420" r_length="420" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="427" polyA_stop="445"/>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U330527" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>420</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46462" e_stop="46043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACAACCACGCCAAATTGCAGGCTCTTAAGGCGAATGAAGCACAGAAGAAGGCTTCACAGGCTGCTGATGAGGAGGCTGGAAGATTGTTGGAGGAAAGAGAAGGGGAGAATGGTGCTAAGAAGAATGAGTCTCAGGGTTGAGTTGTTTCTTCGTTTACTTCGTATTATCCATAGGTAGAATGACATTGAGAGATGAAACCTGAAGATCAGATTATAACGTCCTTGTGCGGATGATTTAGCTTCTGTTTTTTTAGGTATAAATCATTTACATTATCTGTTTTGAGGATCTTATAATAGTTTTATTGCTCGTATTACCTTACCAGATCGTGCATGTACTTGAGCATGACTCGAGGCAATTTATGTTTATTTTGACAGAACAGTAATACTAGAAGAGCTTTTACTAATGAAAGTAACTGAT</genome_strand>
        <mrna_strand>ATTACAACCACGCCAAATTGCAGGCTCTTAAGGCGAATGAAGCACAGAAGAAGGCTTCACAGGCTGCTGATGAGGAGGCTGGAAGATTGTTGGAGGAAAGAGAAGGGGAGAATGGTGCTAAGAAGAATGAGTCTCAGGGTTGAGTTGTTTCTTCGTTTACTTCGTATTATCCATAGGTAGAATGACATTGAGAGATGAAACCTGAAGATCAGATTATAACGTCCTTGTGCGGATGATTTAGCTTCTGTTTTTTTAGGTATAAATCATTTACATTATCTGTTTTGAGGATCTTATAATAGTTTTATTGCTCGTATTACCTTACCAGATCGTGCATGTACTTGAGCATGACTCGAGGCAATTTATGTTTATTTTGACAGAACAGTAATACTAGAAGAGCTTTTACTAATGAAAGTAACTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329487" ref_strand="+" ref_description="SGN-U329487        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT5G15050.1 | Symbol: None | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein, contains Pfam profile: PF02485 Core-2/I-Branching enzyme | chr5:4871642-4873601 REVERSE | Aliases: F2G14.170, F2G14_170 (evalue: 1e-25, score=112) genbank/nr: gi|7269602|emb|CAB81398.1| putative protein [Arabidopsis thaliana] >gi|4972073|emb|CAB43880.1| putative protein [Arabidopsis thaliana] (evalue: 1e-23, score=112)">
      <seq>aaaaatgcctttttactactttctatgaacagtgacaaaataattttttcaagtgaaaagcaacaacaaaggtcaagaatggtagtactactactagtgttcatgaacaatatagaatcttgaaatagcagatcaagaaaatggaacttaccataaagaaaactaaatggatggttcctttagctattgcacttttaatatcttttttcttaatcattttcactctttcaactaaaaccccatttcagaaatcatccattaaagctaaagttccaatctttgttgaatctaaactacatataccttctactagacctatttcaacaatacccaaattggcatatttgatttctggttcaagtggagatggggagagcttaaagaggacattaaaggctttgtaccatccattgaaccagtatgttgtacacttagaccttgaagcaccagctgatgagaggttagagttagtgaactttgtaaaaagggaacctttatttgttgaagttgggaatgtgagagtagttgtgagatctaatttggttacttatagaggacctactatggntagtaatacacttcatgctgctgctattttgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="+" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="52132" stop="53332"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52432" g_stop="53032" g_length="601"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="601" r_length="601" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="+" ref_id="SGN-U329487" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>601</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U329487" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52432" e_stop="53032"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATGCCTTTTTACTACTTTCTATGAACAGTGACAAAATAATTTTTTCAAGTGAAAAGCAACAACAAAGGTCAAGAATGGTAGTACTACTACTAGTGTTCATGAACAATATAGAATCTTGAAATAGCAGATCAAGAAAATGGAACTTACCATAAAGAAAACTAAATGGATGGTTCCTTTAGCTATTGCACTTTTAATATCTTTTTTCTTAATCATTTTCACTCTTTCAACTAAAACCCCATTTCAGAAATCATCCATTAAAGCTAAAGTTCCAATCTTTGTTGAATCTAAACTACATATACCTTCTACTAGACCTATTTCAACAATACCCAAATTGGCATATTTGATTTCTGGTTCAAGTGGAGATGGGGAGAGCTTAAAGAGGACATTAAAGGCTTTGTACCATCCATTGAACCAGTATGTTGTACACTTAGACCTTGAAGCACCAGCTGATGAGAGGTTAGAGTTAGTGAACTTTGTAAAAAGGGAACCTTTATTTGTTGAAGTTGGGAATGTGAGAGTAGTTGTGAGATCTAATTTGGTTACTTATAGAGGACCTACTATGGTTAGTAATACACTTCATGCTGCTGCTATTTTGCT</genome_strand>
        <mrna_strand>AAAAATGCCTTTTTACTACTTTCTATGAACAGTGACAAAATAATTTTTTCAAGTGAAAAGCAACAACAAAGGTCAAGAATGGTAGTACTACTACTAGTGTTCATGAACAATATAGAATCTTGAAATAGCAGATCAAGAAAATGGAACTTACCATAAAGAAAACTAAATGGATGGTTCCTTTAGCTATTGCACTTTTAATATCTTTTTTCTTAATCATTTTCACTCTTTCAACTAAAACCCCATTTCAGAAATCATCCATTAAAGCTAAAGTTCCAATCTTTGTTGAATCTAAACTACATATACCTTCTACTAGACCTATTTCAACAATACCCAAATTGGCATATTTGATTTCTGGTTCAAGTGGAGATGGGGAGAGCTTAAAGAGGACATTAAAGGCTTTGTACCATCCATTGAACCAGTATGTTGTACACTTAGACCTTGAAGCACCAGCTGATGAGAGGTTAGAGTTAGTGAACTTTGTAAAAAGGGAACCTTTATTTGTTGAAGTTGGGAATGTGAGAGTAGTTGTGAGATCTAATTTGGTTACTTATAGAGGACCTACTATGGNTAGTAATACACTTCATGCTGCTGCTATTTTGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343284" ref_strand="+" ref_description="SGN-U343284        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT5G15050.1 | Symbol: None | glycosyltransferase family 14 protein / core-2/I-branching enzyme family protein, contains Pfam profile: PF02485 Core-2/I-Branching enzyme | chr5:4871642-4873601 REVERSE | Aliases: F2G14.170, F2G14_170 (evalue: 1e-112, score=403) genbank/nr: gi|15242199|ref|NP_197009.1| N-acetylglucosaminyltransferase family (Core-2/I-Branching enzyme family) [Arabidopsis thaliana] gi|11291967|pir||T51450 hypothetical protein F2G14_170 - Arabidopsis thaliana gi|9755672|emb|CAC01824.1| putative protein [Arabidopsis thaliana] gi|16209674|gb|AAL14395.1| AT5g15050/F2G14_170 [Arabidopsis thaliana] gi|21554320|gb|AAM63425.1| putative glycosylation enzyme [Arabidopsis thaliana] gi|21700835|gb|AAM70541.1| AT5g15050/F2G14_170 [Arabidopsis thaliana](evalue: 1e-110, score=403)">
      <seq>acgatctactatggttagtaatacacttcatgctgctgctattttgcttaaggaaggtggtgagtgggattggttcattaatcttagtgcttctgattatcctttggtgacacaagatgatttacttcatactttttcaaccgtgccaagagaacttaattttattgagcatacaagtgacattggatggaaggaatatcacagagccaggcctgtaataattgattcagggctgtacagcctgaataaatcagatctcttctggatcccgcagaaaaggagtatgccaacagcatttaaactattcacaggctctgcttggacgatgctctctcgcccctttatggagtaccttttatgggggtgggataatcttccaagaatagtcttaatgtactatgccaacttcctttcaacgcctgaaggatatttccacactgtcatatgtaatgcagaagagttcctgaacactacagtgaatcacgaccttcatttcatatcctgggataaccctccaaagcaacatccacatgttctaactcttaaggattacaagaacatggttgacagcaatgcatcattcgccagaaaattccgcaggaatgaaccagtgcttgacaagattgattctgagctcttggggcgcaaagtcgatggttttgttcctggtagttggtttgatggcggggattccaacgctacaatctcacagtacattctaagaaacataacttcactgagacctggaccaggtgcacagagaatgaaaagtcttatttctagtttgttgtctgataaagattttagctcaaagcactgcatctagttcctgactggttgncattcgcgtgctataatggaaatctttcggttgaataacggatcaattcatcgttgcttattccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="+" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="52684" stop="57442"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52985" g_stop="53103" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.983"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53104" i_stop="54961" i_length="1858">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54962" g_stop="55037" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="195" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="55038" i_stop="55127" i_length="90">
            <donor d_prob="0.853" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="55128" g_stop="55243" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="196" r_stop="311" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="55244" i_stop="56547" i_length="1304">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.889" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="56548" g_stop="57142" g_length="595"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="906" r_length="595" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="+" ref_id="SGN-U343284" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>906</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U343284" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52985" e_stop="53103"/>
          <exon e_start="54962" e_stop="55037"/>
          <exon e_start="55128" e_stop="55243"/>
          <exon e_start="56548" e_stop="57142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGACCTACTATGGTTAGTAATACACTTCATGCTGCTGCTATTTTGCTTAAGGAAGGTGGTGAGTGGGATTGGTTCATTAATCTTAGTGCTTCTGATTATCCTTTGGTGACACAAGATGGTATGTAGTTAAAAACTAGTTCTTGCGAGTTGCAATCTTTTTGATCTATCTTTGCCCTTTTCTGTGTGTTTGCTAGTGAGTATCCTTTTCTGAGCTAGTTGGGACTTGGGACCAGGTGTGGAGTAGGTAGAGCTAAGGGGGTTCAGAACCCTTAAGTGGAAAATTGTGCTATTTATACTTGGTTAAAATTAACTTATATATCTTTTTCATGTACTTACTTCATTAGTTTAATATATCAATCTTACTTTCATTTGCTTGAGATTCTTGGTTTTCAGATTGAATAATGGTGCTTGCTTGCTATTGCTTCATTTCTTTTATTTTCAACACAGGAAATGCCAACTAGAGTTGGTGAACTTTGTAGGGTAACTTTGTTTGTTGAAGTTGGGAATGTGAGAGTAGTGGTGAGATCTGATTTGGTTACTTAAAGAGGACCTACTATGGTTAGTAATGCACTTCATGCTGCTGGTATTAAGCTGATGGAAGGTGGTGAGGGGGATTGGTTAGTTAATCTTAGTGCTTTATGTAGTTAAAAACTATTTTTTGAAATCTGTTTATTATATCTTTGCCCTTATCTGTATGTTTGCTAGTGAGTATCCTTTGCTGGACTAGTTGGGAGCATTTGCTTAATATTTGAATATCAGTTTCATTTGCTGAGATTCTTGGTTTTCGGATTGAATAACTGTGGTACTTGCTAGCTATTGCTGCCTTCTTTTATGTTTAATGATAGGTGACGCCAACTTGTTTTCTTCAGTCTCAAATCTGTATAGATGCTTCTATTATAAGTGGTAGCTAGAATTATGGTTACAGTTATGTTTGGCCATTTGTGGTGGTGAAAGTCGAAATAGTAGTGAAGGATTCCAGTAGACGAAGCAGCATGAACGGCAGTAATTTAACTATAAGAGAATTTAGACTTACTAGTTGTCATTGCTCTTACTTCAGCCTGATACTCAATGAAGTCTCTTTTAGTTTGTAAAAGAATTGTATGTTTGTGTAAATATAACTGTGGGAATTAAGATAGTCCTAATTTTTCTTAAATAACACATCTTTTCGAGTATTCAAATGAGATGGACCTAAATAAAATGTGATGGATACAGAACATTCATGTAGCCAAAGGTTAGTTTAGAATTGAGGTGTACTTGATTGATACATCAATTGAATTCCTTTACTATAAATTAATAACTTTATTGGATCCAGGCTTGACATTGATACAAATTTATTTTAAGCAGCAACTATTTTATACAAGTTCAGGAACTGGTTCATTGAGAAAAGACTTGTATGTTCGTGTAAAGTGAGTTCTTAGAGAATCATAATTTGTCTTAAAAATAACATTCTTTTTATTGGAATGAAATGAGCCCAATAGAATGTAATGGATACAAAATAGAAGAATTAACCTAAAGAGTCGTCCATCCAACTGCTTAAACTAAAATAGCCGAACTTGAAATATGTGTATTCCATTTATAAATATGTGTAGAACTGCGTATAATCCATGTATACTAGCTTGGAAATGTAAATGGTGAATCGGACGGTTATTTGTGTAAAGATCAACTAGAAGAATTAACCTAAATAGATCCTACAAAGTACAAAATATCCATGTATCCACCCAGCTAGTTTGGAGTTGAGGTATACTTGATTGCTAACTGGTTGAATTCCTTGTTTTGATTGTTTAGGGGAGTGGGGGAGGGGAGGTGCTTTTGTGTGAAATAGATTGTTGTTGAACACTTCTAGCATTATTGTTATGCTACTCCAAACTGGACATTGCTTAAAAATTCTTCTAAGAGCCTAACGTCATATATGTGTAGACTGGCTCATTGATTACCGTCTTTCTAATGATCCTGTGCATTGATATTGTGTTTGGCAGATTTACTTCATACTTTTTCAACCGTGCCAAGAGAACTTAATTTTATTGAGCATACAAGTGACATTGGATGGAAGGAGTATGTGGAGCTTTTCATTTGATCAATCAACTTTTTTTTGGTGAGATTTAGTGTGTTTAGCTAACTAAAATGTTATATTTCTGTTTGTAGATATCACAGAGCCAGGCCTGTAATAATTGATTCAGGGCTGTACAGCCTGAATAAATCAGATCTCTTCTGGATCCCGCAGAAAAGGAGTATGCCAACAGCATTTAAACTATTCACAGGTGAGAATTTTGTGCATTTGTGTTGATGCAAAAGGAAGCAATCAAGCTCTTTTGGCTGCTTTGTTTTCTTAATCGCCATTCTCAGCTTTCAAAGCGGTATTTAATCGTCTAAAGCCTCCCCGCAAAGCACCTCTAAATTGTTCCTTGGGTTGGTTTTAGTCCTGTTTTCAGCCAATTCTTCCATAGGATTTCCGTGAGTTAGTCATGTGTATTTGGATTTCGAATCTGCTTGAATTAACAACTTAGTATCAAATACACTTCATGAATTTTCCTTTTCATCCTTTCTACTCTATGCAATGATAATATATTGGAATTTCCTCAGGGGTGACTGTCTCTTCCGTTCCTTAACTTGAGGTAGAGTTCATGATAGGCAGACTCATGTTCTCAATAAGGCCACACGGAAGTATAGATGTTAGGGGAAATACACTTTTTAGGGGAAAAACATTGGGTTTTTGGGTGTGGAGGAAATGATTGGTTTGGAAACCGAACAACGTAAAATTTTAAGTGCTAGGAATATCACACAAATAACTTTCTTGAAGGGGCCTTAAGCATGAGAAAACTCTTTCAAATGGCCTTTCGTTGGTTATCCCTGATATGGTCCATGAATAAACATTGTAGAGTAACTGCACATTTTGATACCAAGAGTTTTTACAAAGAGTTAAAACTACAAAACCAGGTGCACCTTATCTTCCTACTACTGCCTGAGAATCAGCTGTCCTTTTTGATTGTCCACTTATGCAATTACACTGTTGTTTTCGCTTAGTTCAAGTGTGATTCCCCATACTACACTATGATCTCTTAACACATTTTATAGTGAGCTATGTTGTGTTATAACATAAAACATGATTGTTTGAATGTCTGAATTGTCAAATCGTATGAAAATGGGAAAGATATCATACTGGACCTGATTACGCAAGCTTTTGGAAAAACTCAGACATTTGCCTCGATTTCCTTGTACTCAGGCTCCTTCTCAAGGGTTTTTGAGAATTCCTACTGCAAAACAGAAAGATGAAAGCAAAGACATTTCAAACTGCCATTTTCATTTCGTCTTGAATATCAAAATGAATACTTTATCAATGGGGTAGTCAGACTAACTCATTTCTGGCAAGCACTATACTGTTGCACTTGCATATGGTTTCTTACTTTGAACAAGTTGCTGTAGGTCAAGTTCTGTCTTTTTTGCTCCTGTATGATCACTCTGCACTCTGTCCTATGTTTATAAATATTTGCCTGTATACAATCAAATATCAATATACATAGTATATCAGAGATTTTGAAATTGTGATGCTATCGCTTTTCCTCAGGCTCTGCTTGGACGATGCTCTCTCGCCCCTTTATGGAGTACCTTTTATGGGGGTGGGATAACCTTCCAAGAATAGTCTTAATGTACTATGCCAACTTCCTTTCAACGCCTGAAGGATATTTCCACACTGTCATATGTAATGCAGAAGAGTTCCTGAACACTACAGTGAATCACGACCTTCATTTCATATCCTGGGATAACCCTCCAAAGCAACATCCACATGTTCTAACTCTTAAGGATTACAAGAACATGGTTGACAGCAATGCATCATTCGCCAGAAAATTCCGCAGGAATGAACCAGTGCTTGACAAGATTGATTCTGAGCTCTTGGGGCGCAAAGTCGATGGTTTTGTTCCTGGTAGTTGGTTTGATGGCGGGGATTCCAACGCTACAATCTCACAGTACATTCTAAGAAACATAACTTCACTGAGACCTGGACCAGGTGCACAGAGAATGAAAAGTCTTATTTCTAGTTTGTTGTCTGATAAAGATTTTAGCTCAAAGCACTGCATCTAGTTCCTGACTGGTTGCAATTCGCGTGCTATAATGGAAATCTTTCGGTTGAATAACGGATCAATTCATCGTTGCTTATTCCC</genome_strand>
        <mrna_strand>ACGATCTACTATGGTTAGTAATACACTTCATGCTGCTGCTATTTTGCTTAAGGAAGGTGGTGAGTGGGATTGGTTCATTAATCTTAGTGCTTCTGATTATCCTTTGGTGACACAAGATG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTACTTCATACTTTTTCAACCGTGCCAAGAGAACTTAATTTTATTGAGCATACAAGTGACATTGGATGGAAGGA..........................................................................................ATATCACAGAGCCAGGCCTGTAATAATTGATTCAGGGCTGTACAGCCTGAATAAATCAGATCTCTTCTGGATCCCGCAGAAAAGGAGTATGCCAACAGCATTTAAACTATTCACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGCTTGGACGATGCTCTCTCGCCCCTTTATGGAGTACCTTTTATGGGGGTGGGATAATCTTCCAAGAATAGTCTTAATGTACTATGCCAACTTCCTTTCAACGCCTGAAGGATATTTCCACACTGTCATATGTAATGCAGAAGAGTTCCTGAACACTACAGTGAATCACGACCTTCATTTCATATCCTGGGATAACCCTCCAAAGCAACATCCACATGTTCTAACTCTTAAGGATTACAAGAACATGGTTGACAGCAATGCATCATTCGCCAGAAAATTCCGCAGGAATGAACCAGTGCTTGACAAGATTGATTCTGAGCTCTTGGGGCGCAAAGTCGATGGTTTTGTTCCTGGTAGTTGGTTTGATGGCGGGGATTCCAACGCTACAATCTCACAGTACATTCTAAGAAACATAACTTCACTGAGACCTGGACCAGGTGCACAGAGAATGAAAAGTCTTATTTCTAGTTTGTTGTCTGATAAAGATTTTAGCTCAAAGCACTGCATCTAGTTCCTGACTGGTTGNCATTCGCGTGCTATAATGGAAATCTTTCGGTTGAATAACGGATCAATTCATCGTTGCTTATTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342419" ref_strand="+" ref_description="SGN-U342419        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:20822152-20836818 FORWARD | Aliases: MWD22.15, MWD22_15(evalue: 6e-143, score=504) genbank/nr: gi|8843857|dbj|BAA97383.1| contains similarity to unknown protein~dbj|BAA13214.1~gene_id:MWD22.15 [Arabidopsis thaliana](evalue: 5e-141, score=504)">
      <seq>ggtacaccaattttcatcttactttttttattttacaatacaaaaaccctaaactagggcttttcttcccgccttcttcctcactctcactgtgtcagttccggtgaacggagctgaagagtacacacagattccggtgaacagagctgaagagtacacacagattccggtgaacggagctgaaacctacgcagagattccggtgagcggagattaaagctgagagtaacagagaaacaatggtctccctgaagattttactatctctaattgaatctactgtattgaatcccacacctcctacgccatcggagaggatcgagctgcttcacgccattcgtcactctcttccatctttccagtcactactttcctatccgccccccaagccctcggaccgagttcaagtccagtccaaagaagtgagacttccagattctggcccaatttcactggatgatcaggatgttcaaattgccctaaagttaagtgatgatctacatcttaatgaagtagactctgttcggttgcttgtttctgccaatcaagagtggggattattgggacgtgagccattagagatattccgcctcgcagctggactgtggtatacagagagaagagatcttataacagcactttacacactgttgagggctgttgtccttgatcaaggactggaacctgatcttgtggcagatattcagagatttttggacgatctcattaatgctggagttagaaagcggttaatctcactcataaaggaactcaatcgagaagagccatctggtttgggtgggcctaactgtgaacgctatattcttgattcaagaggagctttggtggaaaggagagctgttgtttccagggaaaggctcattctggctcattgccttgtcctttctgttttggtggtgcgtgcaagccctaaagatgtgaaggacgtcttttctactctaaaggatagtgcagcagggcttagtggtagcactgacactttaagccatcagataacatatagtcttctattctcccttgtggtggctctcatatcagatgcattgagtgcagtacctgataaaacatcagtcttgtcccgtgatgcagcttttaggcaggaatttcaggaatctgtaatggtcactgggaatgatcctgttgttgagggctattttgattgcttaaggagtgcatgggttgtacatcttatgctaatacatgacgggattgatgcaaaagatacatcagcaactgcttcatcaaataatgatataaggaacatctattcatgcttggaagttatattctccaacaatgtcttcctgtcttggctgaataagatcctcctaactcctgcctatcagaatgatgatgaggatatgatctacatgtacaatgcctatttgcacaagatgataacatgccttttgtctcatccattggccaaggacaaggttaaagaagcaaaagagaaggctatgacggcacttggtccgtaccgcttgtctacttcacatgatcatactgtggagggaattgggcattttcaaaaggccactgaacctgcaccacaaacttttgtctctctcttggagtttgtgagtgaaatttaccaggttagtgccttttcttgctaattttggagtccctagggcattatcactacgaaaaggtatgaacggtgataccaaattgattttgtatttcaacacataaaactcttgaatatggaaaacaattcaaaactatctttccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="+" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="58027" stop="70980"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58326" g_stop="58705" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="380" r_length="380" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58706" i_stop="59356" i_length="651">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59357" g_stop="59452" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="476" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59453" i_stop="61529" i_length="2077">
            <donor d_prob="0.979" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61530" g_stop="61604" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="551" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61605" i_stop="64120" i_length="2516">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="64121" g_stop="64225" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="552" r_stop="656" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="64226" i_stop="64309" i_length="84">
            <donor d_prob="0.900" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="64310" g_stop="64420" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="657" r_stop="767" r_length="111" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="64421" i_stop="64837" i_length="417">
            <donor d_prob="0.984" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="64838" g_stop="64997" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="768" r_stop="927" r_length="160" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="64998" i_stop="66023" i_length="1026">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="66024" g_stop="66109" g_length="86"/>
          <reference_exon_boundary r_type="cDNA" r_start="928" r_stop="1013" r_length="86" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="66110" i_stop="66673" i_length="564">
            <donor d_prob="0.975" d_score="1.00"/>
            <acceptor a_prob="0.950" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="66674" g_stop="66796" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="1014" r_stop="1136" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="66797" i_stop="66872" i_length="76">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="66873" g_stop="67103" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="1137" r_stop="1367" r_length="231" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="67104" i_stop="69387" i_length="2284">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="69388" g_stop="69477" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="1368" r_stop="1457" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="69478" i_stop="70367" i_length="890">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="70368" g_stop="70686" g_length="319"/>
          <reference_exon_boundary r_type="cDNA" r_start="1458" r_stop="1776" r_length="319" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="+" ref_id="SGN-U342419" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1776</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U342419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58326" e_stop="58705"/>
          <exon e_start="59357" e_stop="59452"/>
          <exon e_start="61530" e_stop="61604"/>
          <exon e_start="64121" e_stop="64225"/>
          <exon e_start="64310" e_stop="64420"/>
          <exon e_start="64838" e_stop="64997"/>
          <exon e_start="66024" e_stop="66109"/>
          <exon e_start="66674" e_stop="66796"/>
          <exon e_start="66873" e_stop="67103"/>
          <exon e_start="69388" e_stop="69477"/>
          <exon e_start="70368" e_stop="70686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGTACACCAATTTTCATCTTACTTTTTTTATTTTACAATACAAAAACCCTAAACTAGGGCTTTTCTTCCCGCCTTCTTCCTCACTCTCACTGTGTCAGTTCCGGTGAACGGAGCTGAAGAGTACACACAGATTCCGGTGAACAGAGCTGAAGAGTACACACAGATTCCGGTGAACGGAGCTGAAACCTACGCAGAGATTCCGGTGAGCGGAGATTAAAGCTGAGAGTAACAGAGAAACAATGGTCTCCCTGAAGATTTTACTATCTCTAATTGAATCTACTGTATTGAATCCCACACCTCCTACGCCATCGGAGAGGATCGAGCTGCTTCACGCCATTCGTCACTCTCTTCCATCTTTCCAGTCACTACTTTCCTATCCGGTAAATTTCTATTCATTTTATTTGGTAGGTCAGTGTAGCTATTGAAGTGAACAAGGAAAAAAACGAGTTTTAAGCTTAAACAGTGGATATCTCAATTATATATATAAGAATGTGTGAGATATGAGGAACAAATAAACTTTAGTTTGAGTTTGATTATTTATTGTTGAAATTTAGTAGACCAGAACAGAGTCCTCATTCATAATGAAAAAAAGGAGGTCTCAAATATTGATGAATGGATATAGAGGATTCGTATAGCCTAGCTGACCTAATTAGGTTTGACTTAGGGATCAGCTAATTGAATGATTGATTGAATTATGCAGTTGTTATTGAATTTCTTTTTTAGATTGTAGAAATGTTATTTTTCTGAATACTCAAGCATGTATATCGATGCGTTAAGAGGTAATTATTTGTGTCTATTGATCTATGAATTTCATTTTCTTGGAATGGTTGGTTTGTTGGTTGATTTTGCTTAAGAAAGAAATATGTGCCTGTGAAATGTTTTGGCCAAAATGAGAATTTTTCACATTGTCTTTTTTTTTTCTCCTTTCAAAATGTGGATTTTTTTTTGAAATTAAAAATATATGTGGAAAAATTATTGTGAAAGAATGATGTTATCAATGACCAAGCTCACTTTTCCCCCTTAATATGTAGCCCCCCAAGCCCTCGGACCGAGTTCAAGTCCAGTCCAAAGAAGTGAGACTTCCAGATTCTGGCCCAATTTCACTGGATGATCAGGATGTTCAAATTGTGAGTTCCGTCACGTGCTGTATTCTCATTATACCATATGTAACTTAATTCATGATTTTTTTTAAAGGATTCTTTTTTTTTCATTACTATCAAAGCATCATAATCCCTTGGAAATTATAATTGGATACTTGCTCATACTAATCTATCTACTCAAGAACGGTTTTTCAATATCAAGTCCCTAAACCTTGGGAGCTGTAGCTCAATATGAGCTAGAAATCTCTTTCTGTGTAATAATTATGTCCTTTTACCAAATGTTACTACACAGTATTTATTTGAGTATGAGTGTTATAGACGGGTAATTTAACAAAGAATGTACCACGAAATGCCACAACTGTTACAGGTAGAATGCTGTTATAGAGAGGTAAAATATAACATGAAAGTTTGACTCTGGAGAAAATAAGGATGTTATAATGAAATGCTGTTATAACGAGGTTTGATTGTACATTGTTGGGTTGATGTCAACTGGACTTATCTTATTTTCTTAGTTAATAATCTCCACCTAAAAACTAGCCATCATCTCTTTACAACCTAAACTTGACCCTTCTGCTAAGAGAACATTATTCTACTAAATGCTGGGAAAGAAAATGTAGAAGACGGACAAAAAATTGTATATTATTCTGAATGATGGCCTCACGAGCTAAAATTGTGTGGCAAACATACAGTGCCATGTTAGCAAAATGTGTCTAACAGACACAATTTAACTTGAGTTTAGGTGGGGCTGCATATGTATTCAGCCAATATTTTGTAATGATAAAATACATATACCTAAATTGTGACTTCACCCTAATTTTTTTTAGTTAAAATCATTGTATCTCTCTTAATTTCTTTATTAATTTTGGTCAAAGTACCCAAAATTGATTGACCATATCTGGTAAGGATCCCACACCTACAACCTTAAGTGGTGAACTATATCTGTGGATATATAGAAGTAGTGTTACCTTTCTCAAAAAATAAAAGTGGTGAAGGTTGCAGAAACTTTTAGATGTAGCTGGGAAGATATTCCATTGTGCTGAGATGTGAAGTGCATGTGCTCCAAGCATTGCTGGGACTTATTTCTTAGTATCTGTGGTCTTCCTTGGATGATGCCTAATAGCATCAGTGGTTTGTTAGAATGATGGCAGGTAGACATATTCCAAAAGGATCTGAAACAAATATGTTTCATTTTTCCTCTCTGCATCTTTTGGACTCTATGGTTGGAGAAGAATAGAGCTTGTATTGGAGGACAAAAAAGTCATATTAATAGGATCAAGAACACCTATTTGCATAATTTTTTTTTTCTGGTGTAAGAGTAGGCATATTGATGGTATAGTGCAGTTTATGATTTTTCGAGAAATCTTAGGAGGAACAAATTAGTTGCATAGTTGTCATAGATCAGTTTATTTTGGTCTTTCAAGAGTCTTGTACTTTTGTATTTTCATTAATAGCACCCTTACCATCTGAGCACATTAAGCCGATGCACTTGATGATACTGAGAATGAAGGAAGCACGGTTATGTGCACAAAAATTGAAATAGAGTTGACATGTCTGCTCCCTCTGATTCCCTGTGATTTAGGGGCATGAGTTGAGACTCACAGCCATAATTATCTTTTAATGTCATTTTCAAAGAAAAAAAACTTTTGCCATTTCAGGACGAAAAACTCTTCATTCGCCTCGCCTGACTGCATCTTGACCAATTGGCATTGCAGTCTCTAGTGTAAAGTAAAGTCAATGTAGGTATTAGAGGAATTCAAGCAAGATTTACAAATGCAACTATTGGATGTAGTGAGTGGAGAAATATTAGGGGAAGAGGAAGACAAGAGTCACCTCGAATGAACTAAACAAATAATTGTGACATGTGTGGGAGGTAGAAAGTATCCTATCGAATTAGTCGAGGTGCATATAAGTCGACGCGGACAACACAGTAATAAAAAATTGTGTTCACACACATAATGGCGAAATTTAAATGTTCTATATCTACTTTGTCTTTGAATTGAACACCTGTTTTATCTTTAGGTGCATATTGTAAATATTTCTCTTTCACATTTGTTTTGGTGTTGCAAACAATTTGTATTGTTCTAATTTGTTTTGTGATATTTAGGCCCTAAAGTTAAGTGATGATCTACATCTTAATGAAGTAGACTCTGTTCGGTTGCTTGTTTCTGCCAATCAAGAGGTAGGTCATTTTCTCTATTTGTTTGTCTTGTAGAATTTTTGGAATTTCTTATGTAATCAGTTTTTGCTTATGCAAAGAGTACTATACAGTTTACTCCTCTTTGATATTTGAAAATTTGCGTTGCTTCCCTTTCTGGACATTGTTTTTGTTGCCTCTAGTCCTTGCCCTATCGGGATAAAGGTAGTGTCTTTGACCCATGTGCAATGTGATCATCGACTCGATAAGCTTCTTTCTAGCCACCACCAACAGTTGCACTTGCACGTAGGTTTGATTTTTCTGCCTCCTTATGTGTTTGTTTGGAGGAAGCCTCCACAGTGATCTCTCACCTCCTTAAACAGTTGGTTCGATCGAAGGTGTAGCAGAGTAGCCTCATTTTCACACCTCTAAGTTATTGACTGACTTGATCCAACTGTCAATTCGGGAGTCAGGACAAATAATCCTATAACTGGAACTTCCATCATTCTCCTGCTTTTACAGTTCCAACTTTTTTTTTCTTGAAATAGGTAACTTTATATTATATCACAAAATAGTACATGGTTGTACTGGAACCATTATATACAGATGTCTCCTTTTCCACTTGTTTCAGTCTATATTGAGTCTAAACATCAATTACTGATTAAGTGTTGATGGAGTATACTTGATTACACCAAAAACATAACAATAGAATGCAGTTTAACTCGACTTTCTGGACATCATTCTCTATGTTCTCAAAACACCTAGAATTTCTTTCTTTCCAAATAGTCCACCATATACTCGCAGAGACAATTCTCAATCTGTTTCTGTCCTTTGCATTCTCTAAGACCTTCCTTGGCATTGTCCAGGAGATGCCTTTGAGATTTGAAAATCCTCCATATTTGTTGGGTGTACTTGCAGTGTAGGAACAGATGGTTCACGGTCTCTAATGCCTCCCCACAAAGAAAACAACTAGAGCATAAGGTTATCCCTCTTCTCTTCAAGTTATCTGGAGTCAGAGCAACTTCTTTGTCCAATAACTATATGAAGCATGAGATTTATGTGGTATTTTGCATCTCCATATTTGTTTCCATGACCAACTGTATGTTTGTTGGTTTGTCCGATCCATCAACTTGTAGGCTGAGTTAACTTTGAATATTCCCCTCTGCTATTTCCCTTCCACCACATAACATCTTCCGCTGTCTGTTCATCTGGATAGGAACTAAAATAAGAATATATAGGCTATAGGTTATTCATGTCTCTCTGCTTGACGCTGGCCAAGAGTTCCCACTTTTCTATTTCATCCTTGCTGGCTACCTCCAATGAGATTTAACTGTAATGACCAATCAAGATAAATATTTTTGGAGATCACTGTAGGCTTTCCTTGAGATTGCGTCGGCATATATCAAATCCTTCCTCTCCCTGCACATATGAACTTTTGATCTTTTGGCTCATTGGGGCTTGGATGTAATTTTTAGAAATATGGCATAACAAGCAACTCCCTTTTTTCAATTTTCTCAGTTGGCTCACAAATCTGCTCATCTAGTGTTGAGTCCTAGGTCTGGTCTGATCCATATGCTTTGTCCCTTCCTTTTTATTTTGATTAACTTGACAAGATTTCTCATCAAAAGGGTCAAATCAGCCATAACAAGAGGTATAAAGAACCTACAAAACGATATGGTTCTCTACAAAAATACCCTATCCTATATACAACCAGGAACTGCATGGGTGCAAAAAACAAGAAGGAGATTGGTGACTACTCAATTGTCCAAAACTCATTTTTCTGATAATAAAGGGAACCCATAGTTGCTACCCTTTGGATGTGCGCAAGGTAAACCCTGCTCCAGTGTAATAACACGCAAACTACACAGGAGAGGTAAACTACACCTGGCAGCTTGACCGAGAAGGCATGCAAAGATTTTTGAACCTTAGACCCCTTATTTGAGAGATCTCCTACTCAACCAACTCGGCCACCCTTATGGATTTCAACTGACCAAAACTCATTTCTATCCATTTAAATACTCTCCTGTTTCTCTCTCCAAAATAATCCACATCAAAGCCAGAGGAGCAACATTCTATCTCCTGCTTATTCTTTTTTCTTCTTACATCTTTCCTGCAGCAACAAGTCATTTACAGATCTAGACATCACCCATGACATACCTTCTGCCCTTCCTTTATGTAGCTTCCACCCTTACACAACTGCCAAAAGCGTTGAGGTTCTGTATTAACTGATATCATAAATTAAGGTGTTCTTTCTGGTGCTGTAGAGTTACCTTCTTTGATGTATCACTATCACAACCCCATCAGAAGGTTGCACTATTGAGACATTCTGTTCACTAAGCTGGTAGATTTCAAGCCATGATGTGACAGCTCAATAATCTTAAGCGCTTCAAAGAATGAAGTTACTTTTTGTCTAGACATCTCCGACTTAAGTACATTTAGTTTTAGGAGCTGAATTCGGGTTTCAGTCACCACCTATAAGTTCTTCTTGATAAAGAAGTTTTCTTCAACACTTTGTTTTCATGACCAGTTTTCACTCTCTTTCTGATTATTGATGCATGCAGTGGGGATTATTGGGACGTGAGCCATTAGAGATATTCCGCCTCGCAGCTGGACTGTGGTATACAGAGAGAAGAGATCTTATAACAGCACTTTACACACTGTTGAGGGTATACTTCTTTCTTAGTTTCTAGGGATAGAGAAGTTTATCTCTTGTTAGCTGCCTGTTAGATATGACACAAGTTATTTTGCAGGCTGTTGTCCTTGATCAAGGACTGGAACCTGATCTTGTGGCAGATATTCAGAGATTTTTGGACGATCTCATTAATGCTGGAGTTAGAAAGCGGTTAATCTCACTCATAAAGGTTGTTTGATTAACTTAATTTTCTTTCATGTCGATCCCTTTGAGTTACATCTGTTCATTTTTGACCATCTTTATCGACAGAGCTTAGATAGACAGTTTTTTTTGGTTGGAAGAGTGTTTTGTGTGTGTAGGTTTTCCTTCAAGTCAACCGTTCAAATTTTTCACTAGTAAGTCCTTAAGTACAAATTCAGAGTCGTATTTTTGATGTAAAGTATCTTCAGTGTCATCTAAATTAAATTTCAGGTAATTTCAAAAACCTAGGACGGTTGTCCTCTCGATGATACTGAGAATGTTCCTTCAGTGCACGTGATCATGTGAAACATGAGTTCATAAATTTGTTTGTTGTTCATTTGACAGAAGTGAGGTGAATGAATATATGCTGATGGTTTCTTGATATTATATGTTGAGTATTTTTTAGGAACTCAATCGAGAAGAGCCATCTGGTTTGGGTGGGCCTAACTGTGAACGCTATATTCTTGATTCAAGAGGAGCTTTGGTGGAAAGGAGAGCTGTTGTTTCCAGGGAAAGGCTCATTCTGGCTCATTGCCTTGTCCTTTCTGTTTTGGTGGTGCGTGCAAGTAAGTTATGGATGGCTATATTTTGATCTTATCCTTATTCACTTCCAAGTTTTTTTAGTCATAGAAATTGTTTCTATTAGGACATACTTATAGTGGCACTATTCTTTTTATTATTGTGTGGGCTAGTAAGTTATGATTGCTTAAGTTAACTCCCGATAAGGATATGCTTATCTTTTCTTCGTTTTAGTTGGGCTTGCATGGTTTCAGGGAAATATGTTGCCAGAGATGATTTCCGGGTAAATCCTATAATGGATCACTGGGATGGTTAATCATTCTAATATTTTCTTTTAGTCCTACTTGACGATGATTGATACAGATTGTTTGTGCATAACCAAGTGTTATTTTCATGTTTAAGAAGCCTGGTACAGCAAGCATTTAGCTAATATGCTTTGTCACATCGTTTTAGACGATTACATGATCATAATATCAGACATCAGTTGTATGTTTCTGAAGTATGTTTCTGTGTGCTCATAAATATTAGTTAAATGTTTTTGAAGTTGTGTACGCTAGAGTCCCATCAATCTGCTATATCTGTTTGTCTGGCCTTATTTTTCTGCATATGACTCCAACACTGAAGTCAACATCCTCAATGTGCTTTGCGCTGTAGAAGAAACTGTACTCATTTGATTGTTATATTAATTTTGTGGTTCTTCAGTTTCCATTTGTCTTAAGCCTTGGGGATGGAGTTAATCAATACTTGTGCTGGTGGGAGGTAGCAGGTACTTAATGCAATAGTCGAGGTGCCCACAAATTGGACTGGCTACCACGATTATAAAAATGTTGTGGTTTCCCCGTTATGATTCTCTGCATGACTTTGTCCCCCTGAATGGGTGTACAATGTGCTTCGTACATCACAAAATGAGAAATGTTCGTTAGCCACTGTTTCAAGTTTTTAGTGTAGTCAGGAATAGCATATATGCCTGGACTGCTCCACATCTCATTTATTCTCCTTTACAGCAATTTAGTTATTCTGTATTTATGTATCTCTTTACCACTGAAAAAGTAATTATCTCTTTCTCATTGTAGGCCCTAAAGATGTGAAGGACGTCTTTTCTACTCTAAAGGATAGTGCAGCAGGGCTTAGTGGTAGCACTGACACTTTAAGCCATCAGGTTTTCTCAGTTTTTGACCATGGTTTTTTCAAGCTTAATGATGAAAACTGATTACAAATTCGGAAGTAGTGGCTTGGCCGGGAAGTTAAATCATCGAATCTTGGGCATTTAATAGATGGTTCTTTTGAAGCTGTATCCTTTCACATAAGAACCTTGTAACTTCTCCAAGTGCCACTTTATGTTCTCTCTCTCTATATATATATATAAGTCAAACTACGTGAAGACGCCAGCATTGGATTTTAAAGCTCAGCCTGTCTCTATACACCATCTCAACTCTTGTACCTGAATTGGGGTTTAAAGCTCAGCCTCAGTCTCTATATACCACCTCAATTTTTTGTTCCTTTAAGAGTTCCAGTATTTTGATTTTGGGGTTTTGCTTTAGGATTATCAGATCTAGATTTTCTTTACATTCTCCTTTTCTTTTTCAAATGCCGAATAGAGGATGGAATGAAACTATTTTCTATCTTGAACTGTATGGCATGTACCCTCTAGCTATCCCTCTTTTCTTGTTCTTCAGTATTTCGCTCTATACTTCTATCTGATCCTCTTTTGAAAAAACTGCAGATAACATATAGTCTTCTATTCTCCCTTGTGGTGGCTCTCATATCAGATGCATTGAGTGCAGTACCTGATAAAACATCAGTCTTGTCCCGTGATGCAGCTTTTAGGCAGGAATTTCAGGAATCTGTAAGCAGACAACCATCTTTTAATGTTTGACTACCAATGGTTTGTCATTTTCAAAACCCTCTATATCTTTTTTTAGGTAATGGTCACTGGGAATGATCCTGTTGTTGAGGGCTATTTTGATTGCTTAAGGAGTGCATGGGTTGTACATCTTATGCTAATACATGACGGGATTGATGCAAAAGATACATCAGCAACTGCTTCATCAAATAATGATATAAGGAACATCTATTCATGCTTGGAAGTTATATTCTCCAACAATGTCTTCCTGTCTTGGCTGAATAAGATCCTCCTAACTCCTGCCTATCAGGTGAAAATTGACTTGTCTCTGATTAAGCAACTACTGATGTTTTATCTTAGCAATTCTCCTTATCCCTGTTATGATTATTCTGGTGTAATCAAATATACTTAAGGTAGGAGTTAGCAGGATTTTGAAGTAAAATTTGTGTATATGGTTTTCAGTACAACCTGTGTACTGTTTGTGAAGAAATATACGAAGTTACCTGTTTAAAAAAAATTATTCTGGTCTAACATGACATGTGATCCCCCCCCCCCCCCCCCCCACAAACCCCAAATCCGAACAACAACACAACAATGAAACTCATTGCAATTTTGGAGGGAACGACATGGGTGCCTTTCATTTTTGGAGAGTCTGAGCATCATAGAAACTCCGAGATTCTGCACTTTTAGTCCTCTATCTCCCTTCCAAAAAGTGTGCATATGATAGTCAGTGTGGAGAGAGAGTTTGGGAGATGCTTTGAAGACAAATCAAGGCCCATCCATGTTGTGAAAGGGAACTGCCTATCCACACTGTTTTTGTGGTGTAAAGGAAATTGTATAGAGGAAATAGATCTTGTAGATCTCATAGTCTCTCCGTAATCTAGATTTTTATTTTTCTTCCCCTTGTAACGCTTTCAGAGATAGCCAGCATTCCTTAATGCCAAGGGATATAGCCAGCATTCCTTAATGCCAAGGGATACCATTTATAAAAAAAACCTTTAGATCTTTAATCCCAAAGCTATACCAACACCAACACTTTGATGTGGTAGTAGACTCCCAATTTACCATGTAAAACTTCGTCTATCCGCTTGAACCATGCCATAGAAAATCTCTCAATCTCTCCAACCAGAAAAAGAAAAAAAGAAAATCTATCATTCTCTCAAGTTTTTCAACTTCCTCGTAAACCTGACTGGAGCATGTAGCAACAATGTGAAATATGTGGGAATACTCGATGATAGTGTACTCTTGGTTAACACATTCTTTCCACTTTGGATAGGCCTCATTGCCAACTACATGCCTCTTTTATACCCTTCTTATGTCCAGATTCCAAGCTGCTTGGTGTTTATTAGATGTTTCTAGTGGTTAATCAAGATATGTTGTAGAAAAAGACCCAATGTTACAATTTAATACCTGTGTTAGGAGCTATATATTTTCTACCAAGCTGACTGGGATGATCACACATCTTCTAAGATTGATCTATAGGTTTGACACCACCTGGAATCATGTCAACACTTGTCTCAAGTAAGTCAAATGAGCATTGTCAGTATCACATAACACTAAAGTATCATCTGCAAACAAAGGTATGGCACTCTTACAGTACATTGTCAAGCTACTGTTGGAGAAAACATCCTCAAGTAACCTCCTGCTACAACTCTATGCATCATCCTGTTAAATGCTTCCATCAGGCCGTTACTAGAGTGAAAAACATAGGGGAAAGCGGGGTGCACAGTCTCACACACCGAACAATCTACATGGACTACCATTCATGAGTACTTGGCTGTTGAGATGCAAAATTTGATCAATTTCTACCATCTTGCACCAAAATCCATTATCAGAATAATTAAGTTAAGAATTTCACTGTCACAATGATCACAAGTCTCTTCAAGATCTAGTTTGCACAAATCCGGGGTTCTCCTTGCTTTCTTCTCGAATCACACCACAGCATTTGCAGCTAGTGCTGTATCTAGAATATGTTTGCCTTCCACAATAACATTTTGCAAAGTAGATACTATCTCACACAAGACCTTCTTTAATCTATTAGAAAGCACCTTCAATGTAATATTATGTGGCCCATATGGAGAGATAACCAGGATAGCTTTTCAAGGAGTAGAAAATGCGTTTGTACACTTGAGGGGTAACCGCTTATCACCTATTTCTTTTTGGTGCGCCCACGAGGTGCCTAATAATCATAGAAGATCATATATTTTTGTTAAGTTTTCACTTTTAACATCGTACTAGCCTATACACTTTTTTTGCCGTACATTAATAACATTATTACTTTATTAAAAAATAGGCAAACAATCCCATCACTTAAACATCCTGTTTTCTGCATAATGTATTGATTATTGGTTGCTGGTTGTAGAAAATCGTATATTTTTGTTATTTCTTTTTTGTCTATCTCGTGATGAATCACCTTCCTTGTGATTTTTTACTCCTGTAGTTGTCATGGGTAATTGGCATATTTCTTGAGTTGTGTAAACAGATACATGGTCCTGGTAGCATATCATGCTTGTTGGTTTGACCCTGTTTTTGTAATTGTCTAGTCCTTCCATTTAGTAATTAACTCAGGTTTCTTTTCTATCTCTCATGGGCAGAATGATGATGAGGATATGATCTACATGTACAATGCCTATTTGCACAAGATGATAACATGCCTTTTGTCTCATCCATTGGCCAAGGACAAGGTTTGTTTAGTTTCTTTTGTTTCAATATTCTAATATTTTTTGAGGGTAAATGATTGAAATTGACTCTAAAAAAGAAGTTATGCTTGTTATTTCCACCCAATTCTGTAGTTCTTTTCTTTCTGAGGCACATGCAATCCGAGGAGTCCGAGTCCTGCTTTGCTTGCTGTCCAGCCCCACCCTGCTGGGATTTTGTTACACTGCCATATGAGTTCATGTCCTATAAAGCAAATATGTAAATTTACACATTCACTAACTTGTATTTATGTGGTGTGTTGAAGCTCATGTATAGTTGGGTTCTCTTTATGGCTGAATAATGAGTGTATGTTCCCCAAGTATCCCTATGATAAAATGCCGTCCTTGCTTTCTCTATCCCATGTGCTATTAGGTATTGAGAGAGATAGAAGAGCTTTGATGAAGTAGAGAGAGTTTTTGTCCACTTGAGGAGTAGCCTCTTTGTGGGACTACACTGGGTATGGTATTGTTGAGGAGTAGCCTCTTATCCCTTGTATCCTTTTGGTGTATTGCATGGTTGTGCTTTTTGTTGTTCTATTCAATATGTACTTGCTTGAATTTTTCGAAGGAATTTCTTTAATTGGAAAAGTTTTTCTTTCTTTTTTTGAATGAGCTATGAAATTGAGATTATTGTTCATTGTTTGGATTAAACTTTTAGATGGTGAACAAACGATCATGAATACAGGCTGTGTCTTGTTGTTTTTTTGGAAAAAAGCTTTAAATTCTAGTAAGGTTTTTTCGTATCAAGTGATCTTGAGATTATTTTATGGTGGGGATTTAGGCTTGCCTGTGAGATTGCTGTATTTACCAAGTGGGAACATAAAGATTGGTGGCTTCTTCATTTCTATTGAATTACTCACTCACTTTTTTTATTACAGGTTAAAGAAGCAAAAGAGAAGGCTATGACGGCACTTGGTCCGTACCGCTTGTCTACTTCACATGATCATACTGTGGAGGGAATTGGGCATTTTCAAAAGGCCACTGAACCTGCACCACAAACTTTTGTCTCTCTCTTGGAGTTTGTGAGTGAAATTTACCAGGTTAGTGCCTTTTCTTGCTAATTTTGGAGTCCCTAGGGCATTATCACTACGAAAAGGTATGAACGGTGATACCAAATTGATTTTGTATTTCAACACATAAAACTCTTGAATATGGAAAACAATTCAAAACTATCTTTCCATTAATAAAATACGAGTT</genome_strand>
        <mrna_strand>GGTACACCAATTTTCATCTTACTTTTTTTATTTTACAATACAAAAACCCTAAACTAGGGCTTTTCTTCCCGCCTTCTTCCTCACTCTCACTGTGTCAGTTCCGGTGAACGGAGCTGAAGAGTACACACAGATTCCGGTGAACAGAGCTGAAGAGTACACACAGATTCCGGTGAACGGAGCTGAAACCTACGCAGAGATTCCGGTGAGCGGAGATTAAAGCTGAGAGTAACAGAGAAACAATGGTCTCCCTGAAGATTTTACTATCTCTAATTGAATCTACTGTATTGAATCCCACACCTCCTACGCCATCGGAGAGGATCGAGCTGCTTCACGCCATTCGTCACTCTCTTCCATCTTTCCAGTCACTACTTTCCTATCCG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CCCCCCAAGCCCTCGGACCGAGTTCAAGTCCAGTCCAAAGAAGTGAGACTTCCAGATTCTGGCCCAATTTCACTGGATGATCAGGATGTTCAAATT.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTAAAGTTAAGTGATGATCTACATCTTAATGAAGTAGACTCTGTTCGGTTGCTTGTTTCTGCCAATCAAGAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGGGATTATTGGGACGTGAGCCATTAGAGATATTCCGCCTCGCAGCTGGACTGTGGTATACAGAGAGAAGAGATCTTATAACAGCACTTTACACACTGTTGAGG....................................................................................GCTGTTGTCCTTGATCAAGGACTGGAACCTGATCTTGTGGCAGATATTCAGAGATTTTTGGACGATCTCATTAATGCTGGAGTTAGAAAGCGGTTAATCTCACTCATAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................GAACTCAATCGAGAAGAGCCATCTGGTTTGGGTGGGCCTAACTGTGAACGCTATATTCTTGATTCAAGAGGAGCTTTGGTGGAAAGGAGAGCTGTTGTTTCCAGGGAAAGGCTCATTCTGGCTCATTGCCTTGTCCTTTCTGTTTTGGTGGTGCGTGCAA..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCCCTAAAGATGTGAAGGACGTCTTTTCTACTCTAAAGGATAGTGCAGCAGGGCTTAGTGGTAGCACTGACACTTTAAGCCATCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAACATATAGTCTTCTATTCTCCCTTGTGGTGGCTCTCATATCAGATGCATTGAGTGCAGTACCTGATAAAACATCAGTCTTGTCCCGTGATGCAGCTTTTAGGCAGGAATTTCAGGAATCT............................................................................GTAATGGTCACTGGGAATGATCCTGTTGTTGAGGGCTATTTTGATTGCTTAAGGAGTGCATGGGTTGTACATCTTATGCTAATACATGACGGGATTGATGCAAAAGATACATCAGCAACTGCTTCATCAAATAATGATATAAGGAACATCTATTCATGCTTGGAAGTTATATTCTCCAACAATGTCTTCCTGTCTTGGCTGAATAAGATCCTCCTAACTCCTGCCTATCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATGATGATGAGGATATGATCTACATGTACAATGCCTATTTGCACAAGATGATAACATGCCTTTTGTCTCATCCATTGGCCAAGGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAAGAAGCAAAAGAGAAGGCTATGACGGCACTTGGTCCGTACCGCTTGTCTACTTCACATGATCATACTGTGGAGGGAATTGGGCATTTTCAAAAGGCCACTGAACCTGCACCACAAACTTTTGTCTCTCTCTTGGAGTTTGTGAGTGAAATTTACCAGGTTAGTGCCTTTTCTTGCTAATTTTGGAGTCCCTAGGGCATTATCACTACGAAAAGGTATGAACGGTGATACCAAATTGATTTTGTATTTCAACACATAAAACTCTTGAATATGGAAAACAATTCAAAACTATCTTTCCAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328926" ref_strand="+" ref_description="SGN-U328926        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:20822152-20836818 FORWARD | Aliases: MWD22.15, MWD22_15(evalue: 5e-133, score=470) genbank/nr: IMP(evalue: 8e-132, score=473)">
      <seq>gaacggcgccagaatgattagtaaatctaaggtattggagttgcttgaagttgtccagttcaaatctcctgatactgtgttgaaatcttcacaagcagtttcaagcgcgaagtatgggtttctggctgaagatatacttaccaatcctgctacttctgaaaaaggtggtgtttattactactcagaacgtggagaccgtttaattgatctagctgcatttcgtgacaaattatgggagaaatacaacttgtttaatccccagcatagctccttcagcactgaagttgagctaaatgaaatccgagatacagtccaacagctgttacgatggggttggaaatacaacaaaaatcatgaagaacaagcagctcagcttcatatgttaactggctggtctcaaattgttgaggtctctgcctctagcaaaatttcctctcttcccaaccgttctgaaatattatttcagttgcttgatgcctctcttggtgcttctggttctcccgactgctcattgaagatggcactgatactgacacaggttggtgtcacatgcatcgccaaactacgtgatgaaagatttttatgccctagtggtttaaactctgatactgtcacttgtcttgacatcatgatgacaaaacaattatctaatggagcatgccattctattctattcaagcttatactggcgattctcagaaacgaatcatcagaagcattgaggaggcgccaatatgccttgctccttagctatatccagtactgtcaacatatgcttgatcctgatcttcctaccacagtaatgcagttattgacaatggatgaacaggaaaatgatgatcaggatcttgaaaagattgtcaaagatcagaccgaaatggcatatgcaaatttttcaataataaggaaggaggctcaatcacttctagatctgatcataaaagatgcaatccatggcagcgaatctggaaaaaccatctcgctctatgttttggatgctttaatttgcattgatcatgaaaagtttttcttgagtcaactgcag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="+" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="78925" stop="84214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79225" g_stop="79255" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79256" i_stop="80532" i_length="1277">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80533" g_stop="80625" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="124" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="80626" i_stop="80708" i_length="83">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="80709" g_stop="80822" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="125" r_stop="238" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="80823" i_stop="80962" i_length="140">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.832" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="80963" g_stop="81133" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="409" r_length="171" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="81134" i_stop="81238" i_length="105">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.848" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="81239" g_stop="81294" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="465" r_length="56" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="81295" i_stop="81374" i_length="80">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.208" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="81375" g_stop="81447" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="466" r_stop="538" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="81448" i_stop="81545" i_length="98">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.975" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="81546" g_stop="81736" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="539" r_stop="729" r_length="191" r_score="0.995"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="81737" i_stop="81840" i_length="104">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.323" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="81841" g_stop="81967" g_length="127"/>
          <reference_exon_boundary r_type="cDNA" r_start="730" r_stop="856" r_length="127" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="81968" i_stop="82100" i_length="133">
            <donor d_prob="0.539" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="82101" g_stop="82178" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="857" r_stop="934" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="82179" i_stop="83803" i_length="1625">
            <donor d_prob="0.924" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="83804" g_stop="83914" g_length="111"/>
          <reference_exon_boundary r_type="cDNA" r_start="935" r_stop="1045" r_length="111" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="+" ref_id="SGN-U328926" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1045</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U328926" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79225" e_stop="79255"/>
          <exon e_start="80533" e_stop="80625"/>
          <exon e_start="80709" e_stop="80822"/>
          <exon e_start="80963" e_stop="81133"/>
          <exon e_start="81239" e_stop="81294"/>
          <exon e_start="81375" e_stop="81447"/>
          <exon e_start="81546" e_stop="81736"/>
          <exon e_start="81841" e_stop="81967"/>
          <exon e_start="82101" e_stop="82178"/>
          <exon e_start="83804" e_stop="83914"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACGGCGCCAGAATGATTAGTAAATCTAAGGTAAAGTTTTACCACTCACTGTGTCTTGAATATTCAGGAATATGATTACATCCTCTTGTTTTTGCACTGGTTCTCATTGTTATTAATGTCACATTCCAAACATTTTATTTCATGCTTTTGTTTCCTGTATATGCCGTGCCCTCTTGTCCCTCTCTCTGGCTGTCGTTTACTATCACTTCTCAACATTCTATTAAACAAGTCAACAAGTTATTTGCCTTTTGTTCATATGAAGTCAAGCATTTGCTCAAAATCATTGAAACTCTCTGATCTAAACTTTTATGTTTTCTTTTATTTTCATATTTAACTTGCTCTCAACATTTCTTCCACTTAAGTGGTGACATTACCCAGATTGTTCCTGCCATAATCCGTTATCTATGTTCAATGTGTTCTTAACTTCTGCCCCACCTCCATTGTGTTTTTTTTGGGATAAAGGTACCAATTTATAACAGAGAACTATTACCTACAATCCTCCTAGATTCTCCAAAAAAGAAGTAATGTCCTCCACTTCTTTGGGGAGGACAAGATTACACCAAAAATATAAGGTTACTAGATGGTTCAACTTCCAACATTGGAGAGGTTCGCTCTTGTTCTCAGAGCATCTTAGGTTCCTTTCCTTCCAAATTGTCCACCAGATGCATGTAGGGACAATCTTCCATCTCTCCTTGTGACATGATTTTTTGCCTTCTTTGTTCCAACTTGCTAGAACTTCTGATGTTTCTCTTGGCATAACCCAACTAATTCCTCCAAAATTAAAGAACATCTGCCACAGTGTCTCTGTCACCCTGCACTGTATGAAGAGATGGTTTGTTGTCTCTATTTCAAGTTCACAAAAAAAGCATCTGGATCATAACCGTCTACCCCACCTCCATTATGTATATCTTAATCATTTTTCCACTTCTTCATCTGCACATTATGAGGTATCTCCCAAACCACTTAGAGCAACCTTCCCTAAAGTTTCTCCCTTTTGTTGTTGATGTATGTAGTAGGAGAGCACACTTCTATTATTTATGTCTTCACTATCGAAAGTCAATATTCAACCAACAAAAGTATAAAATGTACCAAACTTAATACTGGTATTATCTTGTGATCCCATTAACCAAATGAGCCCTTATTGTGGTATTCCTTTCTTGTCACTTGTGTTCTCTTCATAACATTTCAATTTATTTTAAATAATTTTTTGGTAGATCCTTTTTTTTGTTTTTGGATAAGTAAGATAAGTATCTTCTATTTTCATTAATAAAGAAAGTAAGAACAACTTCCATTGCATTTATGTGTAGGTATTGGAGTTGCTTGAAGTTGTCCAGTTCAAATCTCCTGATACTGTGTTGAAATCTTCACAAGCAGTTTCAAGCGCGAAGTATGGGTTTCTGGTAGGAACCTTGTTAGGTTTGGAGCAGTTTTTCATTGCTATTATCTTTGGGGAGTACTCTTATCATTCTCTGGCATTCTGCAGGCTGAAGATATACTTACCAATCCTGCTACTTCTGAAAAAGGTGGTGTTTATTACTACTCAGAACGTGGAGACCGTTTAATTGATCTAGCTGCATTTCGTGACAAATTATGGGAGGTACAGTATTTCTTTGCAATCCAGTTTTTCCTTTCTTTTGTCCCTTATTTATTTATAAGATCCCTTTAGCCACCTGAGATTGTTTTTATCTATTGGAGGTGCTGCATAACCTTTCTTTTAAAATTTTATCCCTCTTTCAGAAATACAACTTGTTTAATCCCCAGCATAGCTCCTTCAGCACTGAAGTTGAGCTAAATGAAATCCGAGATACAGTCCAACAGCTGTTACGATGGGGTTGGAAATACAACAAAAATCATGAAGAACAAGCAGCTCAGCTTCATATGTTAACTGGCTGGTCTCAAATTGTTGAGGTCACATTTCTTTTCCTTCGTCACTTGGTTCTCAATTCGTCGGTATGCTTTGCTGTAAGTACGTGCGTTGGGCTAACATATTCTGTTATGCAAATTTTCTTCTAGGTCTCTGCCTCTAGCAAAATTTCCTCTCTTCCCAACCGTTCTGAAATATTATTTCAGTGAGTGACCATTTTCGTTTTTTTTCTTTCTGTTTTGTTGCCAATCTTTGATCCCGTCTCACTTTTTCTTCCATGCATAGGTTGCTTGATGCCTCTCTTGGTGCTTCTGGTTCTCCCGACTGCTCATTGAAGATGGCACTGATACTGACACAGGTTATACATTTCTCATCTTCTTAGTTTGTTGAAGTGGTTACACCATGTATTGCAGTTACCTCGATTATATTCTTATTTTGCTTAAGATATTTGTGTAGGTTGGTGTCACATGCATCGCCAAACTACGTGATGAAAGATTTTTATGCCCTAGTGGTTTAAACTCTGATACTGTCACTTGTCTTGACATCATGATGACAAAACAATTATCTAATGGAGCGTGCCATTCTATTCTATTCAAGCTTATACTGGCGATTCTCAGAAACGAATCATCAGAAGCATTGAGGAGGCGGTATAGTGTTTCATATTTGCTTAATCTTTGATTAATCTATTCCTTTAGCTTTGTTGCAGAGAAAAGGAAGTCTCTGACTTTTGCTGTTTGTTTCTTGACTACAGCCAATATGCCTTGCTCCTTAGCTATATCCAGTACTGTCAACATATGCTTGATCCTGATCTTCCTACCACAGTAATGCAGTTATTGACAATGGATGAACAGGAAAATGATGATCAGGATCTTGAAAAGGTTCTAAAATCTTCGTGGGGAAACTTCCCATTGGATCTCCCTATTGTTGTATTCTTACTGGATCAATTTAACACAATGATGTAACGAGTTGTTATTCCATTCTCTCATTCTGTTCTATCTTAAATTTGAACAGATTGTCAAAGATCAGACCGAAATGGCATATGCAAATTTTTCAATAATAAGGAAGGAGGCTCAATCACTTCTAGATCTGGTGGGTAGCACATTTCAGATTGAATTCTTAATTTTGTTTGTTGTTTCTTCTGATGCTGATCTATATCGGGGATTGGGACCGGTAGTGTGAACAAGCTCGTACAGGCAGATTTAACTTCTCTCACTCATCTGCACAAGTTATTTTATTTAAAGTATACCATTATTACTCCATTTCTCTACTTCCTGTGTTTATTGTTGAAGTGTGTGACCATCTTATCTAAAATCGTTGTTAGAAAGCAGACTATTTATTATTTAATAATATTCTTAACACGTCCTCTCACTTGTGGGCCTGATTCTTTTTCATGGGCCAAGCATGTGAAAATTCTTTTTGATATGGGTGGCGGTGAGATTCGATCTTAGGACCTCTATTTGCTCTGTTACTAGTGTTGTGAAAAGCGACAAAAAGTGCGAAGCGAGGCAAGGCGCAAGCACTGCACTTTTATGCTTTGAAGTGAGGCGCTGCTAAAAGTGCGAGGGCTTCTGTAGGCAAAGCAAGAAGTGCGCTTAAAGCAAAGGCGATAAAAAGCGCTCTTAACCGTGTTAGGTTTTTTATTTTTAACTTCTGTTAATATACTTGTCTGCTGCAACTCAACATTTCCCTCTTCTTCTTCTGTGACTCAAACATCTCAACATCTGTTGCTGCAACTCAACGAGAAGTTCTTCCTCTCTTTTCTTCTTCTTCTTTGGACTCTCTTTCTGGCTTTTAACGACTACTTTTAGGGTTTCCCCCCTGTTATGCTCTGTTTTTTTTTTTACTTATTTGGTTTTGCTGTTTGCATTTGCTCAATATGTTATGATTATGAGTATTATTGACTATTTTTTATTTGCTTTTTAATTTAAGAATTGAAAGATTTGCTTAGTATGTTATTTCTATTAATTGGTTATTTATATATGCATATTTAATATTTTTTTATTTGTTGTACTAAACAATACTTTAGTAGAAAAGAGCGTGCGCTTTGCTTCACACTTCACGCTTTGGCGAAGCAAGCTCTCGTCGCTTTTTTCTGCTTCTCGCTCTCCAAAACACTGCTTGATACCAAGTTGAAGTGTCTGACCGTCTCATTTAAAAACTTAAGCTATTAGAGAGAGCACATTTTTATTAGTTCTTGGGCCTAACTCAACACACCTCCTAATGTTAAATTAGGTGTTGGACCTATTTCACACCCCAAAAGCTAAGCTCAAATGGAGGAGGATTTCCCAAGCTTTATAAGGGGTCTACCCATCTAATTGACCAACAATGTAAGACTTTTTTCTTTCTTTTAACACCTCAGCTCACCTCACACCCGATGCTTAGCATCTAGTGCGTGCGCAATTTTAATTTCGGGGGTCCAATATTGGGTGAGACGGGTCCTGCCTTGATATCAAGTTGATGTGTGACCATCTCATATAAAAATTTAATTTGTTAAAGAGAGCACTTTTGTTAATTAATTATATTCTCAACAATTATCATAATTCATCTACTTTTTACTCGATGAAACTTTTAAAATTGATTTCCTGTTCCTTTTCCTCTGTATCTATCACATTATGGCTCCATATTTTCCTTTTGCATTTTGAAGTGTGTATGTATCATAATTGCTTTCTTGCTTCGCTAGCTTACCGTGCTTTTTTGTTTTATTCTAAAAACAGATCATAAAAGATGCAATCCATGGCAGCGAATCTGGAAAAACCATCTCGCTCTATGTTTTGGATGCTTTAATTTGCATTGATCATGAAAAGTTTTTCTTGAGTCAACTGCAG</genome_strand>
        <mrna_strand>GAACGGCGCCAGAATGATTAGTAAATCTAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTATTGGAGTTGCTTGAAGTTGTCCAGTTCAAATCTCCTGATACTGTGTTGAAATCTTCACAAGCAGTTTCAAGCGCGAAGTATGGGTTTCTG...................................................................................GCTGAAGATATACTTACCAATCCTGCTACTTCTGAAAAAGGTGGTGTTTATTACTACTCAGAACGTGGAGACCGTTTAATTGATCTAGCTGCATTTCGTGACAAATTATGGGAG............................................................................................................................................AAATACAACTTGTTTAATCCCCAGCATAGCTCCTTCAGCACTGAAGTTGAGCTAAATGAAATCCGAGATACAGTCCAACAGCTGTTACGATGGGGTTGGAAATACAACAAAAATCATGAAGAACAAGCAGCTCAGCTTCATATGTTAACTGGCTGGTCTCAAATTGTTGAG.........................................................................................................GTCTCTGCCTCTAGCAAAATTTCCTCTCTTCCCAACCGTTCTGAAATATTATTTCA................................................................................GTTGCTTGATGCCTCTCTTGGTGCTTCTGGTTCTCCCGACTGCTCATTGAAGATGGCACTGATACTGACACAG..................................................................................................GTTGGTGTCACATGCATCGCCAAACTACGTGATGAAAGATTTTTATGCCCTAGTGGTTTAAACTCTGATACTGTCACTTGTCTTGACATCATGATGACAAAACAATTATCTAATGGAGCATGCCATTCTATTCTATTCAAGCTTATACTGGCGATTCTCAGAAACGAATCATCAGAAGCATTGAGGAGGCG........................................................................................................CCAATATGCCTTGCTCCTTAGCTATATCCAGTACTGTCAACATATGCTTGATCCTGATCTTCCTACCACAGTAATGCAGTTATTGACAATGGATGAACAGGAAAATGATGATCAGGATCTTGAAAAG.....................................................................................................................................ATTGTCAAAGATCAGACCGAAATGGCATATGCAAATTTTTCAATAATAAGGAAGGAGGCTCAATCACTTCTAGATCTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATAAAAGATGCAATCCATGGCAGCGAATCTGGAAAAACCATCTCGCTCTATGTTTTGGATGCTTTAATTTGCATTGATCATGAAAAGTTTTTCTTGAGTCAACTGCAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320181" ref_strand="+" ref_description="SGN-U320181        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:20822152-20836818 FORWARD | Aliases: MWD22.15, MWD22_15(evalue: 7e-109, score=391) genbank/nr: gi|30696017|ref|NP_199933.2| expressed protein [Arabidopsis thaliana](evalue: 5e-107, score=391)">
      <seq>gttagagtcaatgcagcgtgtctgcactcttgaagcggaacttgctcttcttctgagaattagccacaagtatggtaaatctggggcccaggtgcttttttcaatgggtgcatatgagcacatatctgcctgtaaggcactaaatatgcaattgaagggaagctaccggcgcatggatggcaaatttggaagagaactgtcagttgatgttgataaacagcgaatgataatagctccaatcttgagattggtgttttcacttacttcattggttgatgcatctgaattttttgaggttaaaaacaaagttgtacgtgaagtcattgaatttgtaagaagtcatcaattactttttgatcaaatcctacgagaagatctttctgatgctgatgtcttgacaatggaacaaataaatttggttgttggcatacttacgaagatttggccatatgaagagaccgatgaatatggttttgttcaagggctttttgtgatgatgcgttttcttttctctcgtgagccagactcttttattacaaaccaatctatggattttctggaggaacgtcggaaggcagaaatgaatgcatctcgtctttgctttagcctgagttcttatctctgttttcttgttacgaagaagtctttaagattgccggtctcagatggtcgaatggactatcgcacttctgctggtcagcaacagccaacattgaatttacttggttttcttctcaactcgctgactacagcattggaaagagctactgaggacagatatttattgcttagcaagattcaagacataaatgaactttcaagacaggaagtggatgaaatcatcaatatgtgtgttcccaagggttgtatttcgtcgtccgagaacattcagaaaaggagatatgtcgcgatgttggagatgtgccagattgttggagataggaatcaacttatgacactattgcttttactagcggaaaacgtgatgaatattatccttgttcattttcaggacagttcttttgaatgtgacaacaaacgctactcaaaagatgacttgaatttgctatgtggaaagttaatttcagctttggagaggcttgaattactaagcgaggataaaacaggtcatgaccttaaagtatttcgaagattagctagttctctgaaagaaatatcgattcagaagtcacctgtttgaccggccatctccttcttttgttctttcataaatttttagcataggggggtatgaggaatttagttgtaatgtaattgtatatttatcttttacatagtgcttgtcctatatttttttaatcctccaatctgttgtacatattgtatatcatacttacagcctcttttgtgctttttgtgggggagttctgaatgttacagaagacagattacactagaaggctattagtagttatactcctataggtcttgccccttatttataggtttttgtacttcaattatcatattattttgtgtatttactgttcagaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="+" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="84913" stop="89127"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85213" g_stop="85369" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="157" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="85370" i_stop="85442" i_length="73">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="85443" g_stop="85580" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="158" r_stop="295" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="85581" i_stop="85952" i_length="372">
            <donor d_prob="0.755" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="85953" g_stop="86096" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="296" r_stop="439" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="86097" i_stop="86263" i_length="167">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="86264" g_stop="86386" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="440" r_stop="562" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="86387" i_stop="86505" i_length="119">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="86506" g_stop="86601" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="563" r_stop="658" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="86602" i_stop="86751" i_length="150">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="86752" g_stop="86889" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="659" r_stop="796" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="86890" i_stop="86968" i_length="79">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="86969" g_stop="87069" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="797" r_stop="897" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="87070" i_stop="87688" i_length="619">
            <donor d_prob="0.678" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="87689" g_stop="87808" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="898" r_stop="1017" r_length="120" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="87809" i_stop="87886" i_length="78">
            <donor d_prob="0.939" d_score="1.00"/>
            <acceptor a_prob="0.783" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="87887" g_stop="87986" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="1018" r_stop="1117" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="87987" i_stop="88429" i_length="443">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="88430" g_stop="88826" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="1118" r_stop="1514" r_length="397" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1515" polyA_stop="1528"/>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="+" ref_id="SGN-U320181" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1514</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U320181" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85213" e_stop="85369"/>
          <exon e_start="85443" e_stop="85580"/>
          <exon e_start="85953" e_stop="86096"/>
          <exon e_start="86264" e_stop="86386"/>
          <exon e_start="86506" e_stop="86601"/>
          <exon e_start="86752" e_stop="86889"/>
          <exon e_start="86969" e_stop="87069"/>
          <exon e_start="87689" e_stop="87808"/>
          <exon e_start="87887" e_stop="87986"/>
          <exon e_start="88430" e_stop="88826"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTAGAGTCAATGCAGCGTGTCTGCACTCTTGAAGCGGAACTTGCTCTTCTTCTGAGAATTAGCCACAAGTATGGTAAATCTGGGGCCCAGGTGCTTTTTTCAATGGGTGCATATGAGCACATATCTGCCTGTAAGGCACTAAATATGCAATTGAAGGTATTTTTTCCTCTATTCATGTGATTTAGTTTGCAATATCCTCTTTGATTAAATTGTTACAATCTTTTACCAGGGAAGCTACCGGCGCATGGATGGCAAATTTGGAAGAGAACTGTCAGTTGATGTTGATAAACAGCGAATGATAATAGCTCCAATCTTGAGATTGGTGTTTTCACTTACTTCATTGGTTGATGCATCTGAATTTTTTGAGGTGTGCTTCATTTCTTCATTCGAATGCAGTATAATGTTGTAAAGACAATATCAACAACTTTTACTTTAACATGAAATATTTTTAATTTCAAGAAAAATGTTGTGAAGACATGAAAAATTATTTCATTTTAAAGTCAAAAAAGTTTTTGATACCTTATGGTGCTTAAAATTCTTGTTTCTGACAAATAATCTTTTGTAGAAAGAAACAAAGAGTTATCCTTAATGGTTGGTTCAATTAATTATATAGTTCTAGAATATGAAATATCTGAATGAACTTCTGGCAATTTGGCACTTATTCAAGAGGTTTACCATATTTTAAAAAAGTCCTCTTTCTCTTGCGATCTATCCTTTTAATTAAGTGGGTGACTAGCAGGTTAAAAACAAAGTTGTACGTGAAGTCATTGAATTTGTAAGAAGTCATCAATTACTTTTTGATCAAATCCTACGAGAAGATCTTTCTGATGCTGATGTCTTGACAATGGAACAAATAAATTTGGTTGTTGGCATACTTACGAAGGTACGTTTCCGTACAGTTTTTTTGCATACTGTCTTTTAGGTGGATTTCAATTCCATTGATGGTTATATTACTGATGATATTTTAGCCATTTAAATAGCCAGTTGCTATTCTTGCCCCTATAATTAACAAATTTTTTTAACTTACTTTTGAACTGTATTTCTGTGTAGATTTGGCCATATGAAGAGACCGATGAATATGGTTTTGTTCAAGGGCTTTTTGTGATGATGCGTTTTCTTTTCTCTCGTGAGCCAGACTCTTTTATTACAAACCAATCTATGGATTTTCTGGAGGTAATAAGAATTTTTAGGTTTAGCTTGATTGTGTATTATTAAGGCAAGATGTATACAACGGTGAAGCTTGTATGGTCATAGACCGCCTCACTTTTGTTTCCTTTTGTATGTATTATCAGGAACGTCGGAAGGCAGAAATGAATGCATCTCGTCTTTGCTTTAGCCTGAGTTCTTATCTCTGTTTTCTTGTTACGAAGAAGTCTTTAAGATTGCCGGTACGTCAAAATTGACTTGTTTAATTATTTTCCTGCTTATGAACTTTTAAGTCAACGGTTAGGCATTAAATGTTTATGTCCTTTTCTTGCTGGTGCCTTGATAAATATTTTTGGCATGTGTCACAATTTTGTTCACTCTATTTGGATCAGGTCTCAGATGGTCGAATGGACTATCGCACTTCTGCTGGTCAGCAACAGCCAACATTGAATTTACTTGGTTTTCTTCTCAACTCGCTGACTACAGCATTGGAAAGAGCTACTGAGGACAGATATTTATTGCTTAGCAAGGTGAAAGATATGTGTTTTGGCTACTGAATAAAGAATTAATATTTGATTATCTGAGCTTTAAATCTCTTCATTATCCCAGATTCAAGACATAAATGAACTTTCAAGACAGGAAGTGGATGAAATCATCAATATGTGTGTTCCCAAGGGTTGTATTTCGTCGTCCGAGAACATTCAGAAAAGGTACATGTAGCTTCATGTAATACAATTCCAGGATAGAGTTTTGCTCGTCTAGTTATGAGATGTCTGATTTAGATCATTAAAACTAGCTGGAGGGTGGCGGGGCATTGCCACATATAGTAAAGGTTGGGTGGTCAGTTGAACACCCTTCGTCGAAAATTTATAGATAGTAAGCTTCCTATTAGTTCAACTCCGTCTGTCCAAATCGTGTTTTCTGGTCATCTCCTTTTTGAGTGCTGATACAAACGACAGTTTATTTGCAACCAGCCCAAGTGGCAGTGATGACCTCACCTAAAGAATAACTACTACGACTGTTTTACTCAAGTAATTACTTGTATCCAGACATAATGTCTCCCTGAAATTTCTTTAATATCCAAGGCCCAAAAATAGATCCGGTTTGGTGGTCAAACATAGGAAGTACACTCAATTTTTATTTCATTAACCTTTAATGCAATATGTGGATTTTGTTGACCATCACATATTAATTGATGTAGTCATATGCTTAATCTTGCAATTGTTGTGCTGACTGGATGAGCTACATTGTTTATTGGTGAATGATTATCATGCTTTAAATCCCTTTAGTATGCTAATCTGACTAATTTTCTGATTGGTTATATTCCAGGAGATATGTCGCGATGTTGGAGATGTGCCAGATTGTTGGAGATAGGAATCAACTTATGACACTATTGCTTTTACTAGCGGAAAACGTGATGAATATTATCCTTGTTCATTTTCAGGACAGGTACCATATTTATGGCACTTCTCTTTCGTTCATGGCTATGCAAATTCTGCTTGGTTTAACTTCTACTGGGCATTGCAGTTCTTTTGAATGTGACAACAAACGCTACTCAAAAGATGACTTGAATTTGCTATGTGGAAAGTTAATTTCAGCTTTGGAGAGGCTTGAATTACTAAGCGAGGTATGCTAACAGTAACTTTTATCTTATGATATAGTCGTAAGTTTAAGATTACCAATCCTCTCTAAGGGTGTATTTGATTGGTCAAGATGTTTTGGACAACAAGTATCTTAAAATTGAGGGAAGTGACTTCCCCAATAGTAATTGGGAGCCTAGCTCCATTGGCCCTTGTGATTACTTTTTACAACATACCCAGTAGTTGCACAGGTGGGCTCTTTGGAGGGTGAGGAGTACGCAGATCCTGTGCCTACCTTTTGGAAGGTGGGTAGGGAGGCTGTTTCTAATGGGAATTTCCGATTATAAAAAAAAGCTTGTAATATTTCTCGTTCCACCATGTTTTGCATTATGTAAATTTTTGATACCTGAATGGCCAATGCTTGTTATATTTCTCCGTTTCTGTAATTTTGGGATTTAACCTTTCATTTTAATATTTTTCTTCTTTGCAGGATAAAACAGGTCATGACCTTAAAGTATTTCGAAGATTAGCTAGTTCTCTGAAAGAAATATCGATTCAGAAGTCACCTGTTTGACCGGCCATCTCCTTCTTTTGTTCTTTCATAAATTTTTAGCATAGGGGGGTATGAGGAATTTAGTTGTAATGTAATTGTATATTTATCTTTTACATAGTGCTTGTCCTATATTTTTTTAATCCTCCAATCTGTTGTACATATTGTATATCATACTTACAGCCTCTTTTGTGCTTTTTGTGGGGGAGTTCTGAATGTTACAGAAGACAGATTACACTAGAAGGCTATTAGTAGTTATACTCCTATAGGTCTTGCCCCTTATTTATAGGTTTCTGCACTTCAATTATCATATTATTTTGTGTATTTACTGTTCAGA</genome_strand>
        <mrna_strand>GTTAGAGTCAATGCAGCGTGTCTGCACTCTTGAAGCGGAACTTGCTCTTCTTCTGAGAATTAGCCACAAGTATGGTAAATCTGGGGCCCAGGTGCTTTTTTCAATGGGTGCATATGAGCACATATCTGCCTGTAAGGCACTAAATATGCAATTGAAG.........................................................................GGAAGCTACCGGCGCATGGATGGCAAATTTGGAAGAGAACTGTCAGTTGATGTTGATAAACAGCGAATGATAATAGCTCCAATCTTGAGATTGGTGTTTTCACTTACTTCATTGGTTGATGCATCTGAATTTTTTGAG....................................................................................................................................................................................................................................................................................................................................................................................GTTAAAAACAAAGTTGTACGTGAAGTCATTGAATTTGTAAGAAGTCATCAATTACTTTTTGATCAAATCCTACGAGAAGATCTTTCTGATGCTGATGTCTTGACAATGGAACAAATAAATTTGGTTGTTGGCATACTTACGAAG.......................................................................................................................................................................ATTTGGCCATATGAAGAGACCGATGAATATGGTTTTGTTCAAGGGCTTTTTGTGATGATGCGTTTTCTTTTCTCTCGTGAGCCAGACTCTTTTATTACAAACCAATCTATGGATTTTCTGGAG.......................................................................................................................GAACGTCGGAAGGCAGAAATGAATGCATCTCGTCTTTGCTTTAGCCTGAGTTCTTATCTCTGTTTTCTTGTTACGAAGAAGTCTTTAAGATTGCCG......................................................................................................................................................GTCTCAGATGGTCGAATGGACTATCGCACTTCTGCTGGTCAGCAACAGCCAACATTGAATTTACTTGGTTTTCTTCTCAACTCGCTGACTACAGCATTGGAAAGAGCTACTGAGGACAGATATTTATTGCTTAGCAAG...............................................................................ATTCAAGACATAAATGAACTTTCAAGACAGGAAGTGGATGAAATCATCAATATGTGTGTTCCCAAGGGTTGTATTTCGTCGTCCGAGAACATTCAGAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGATATGTCGCGATGTTGGAGATGTGCCAGATTGTTGGAGATAGGAATCAACTTATGACACTATTGCTTTTACTAGCGGAAAACGTGATGAATATTATCCTTGTTCATTTTCAGGACAG..............................................................................TTCTTTTGAATGTGACAACAAACGCTACTCAAAAGATGACTTGAATTTGCTATGTGGAAAGTTAATTTCAGCTTTGGAGAGGCTTGAATTACTAAGCGAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................GATAAAACAGGTCATGACCTTAAAGTATTTCGAAGATTAGCTAGTTCTCTGAAAGAAATATCGATTCAGAAGTCACCTGTTTGACCGGCCATCTCCTTCTTTTGTTCTTTCATAAATTTTTAGCATAGGGGGGTATGAGGAATTTAGTTGTAATGTAATTGTATATTTATCTTTTACATAGTGCTTGTCCTATATTTTTTTAATCCTCCAATCTGTTGTACATATTGTATATCATACTTACAGCCTCTTTTGTGCTTTTTGTGGGGGAGTTCTGAATGTTACAGAAGACAGATTACACTAGAAGGCTATTAGTAGTTATACTCCTATAGGTCTTGCCCCTTATTTATAGGTTTTTGTACTTCAATTATCATATTATTTTGTGTATTTACTGTTCAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313116" ref_strand="+" ref_description="SGN-U313116        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | 4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase, identical to gamma-aminobutyrate transaminase subunit precursor (Arabidopsis thaliana) (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434 | chr3:7835165-7839048 FORWARD | Aliases: MKA23.13(evalue: 1e-36, score=149) genbank/nr: gi|29837284|gb|AAO92256.1| gamma-aminobutyrate transaminase subunit precursor isozyme 2 [Lycopersicon esculentum](evalue: 3e-51, score=203)">
      <seq>agaaggtttgaaagcatttatagacagtccaataattggagagataaggggaactggtttagtactttctacagagtttgtagataacaaatctcctaatgatccttttccaccagaatggggtgttggtacatattttggatcacaatgtcaaaagcatggtatgttggtgagtttttctggtgatcatgtaaatatggcccctccattcaccttgagtcttgaagaacttgatgagatgataagcatatatgggaaagcattgaaggatactgaaaaaagagtggaagaattgaagtctcagaagaagtaaaaatctcatgaaaaaaaagttatttcaagtttaaataaaaactttgttgtagttttttttttttttttgagtgttgctactcataacataaaagtgttttattatattctattgttttaatgagagcaacatttgaataaattgggtcattttttatttcaatatgattgaaattttaaatttcttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaccccggggggggggggggggacccccccccccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="96921" stop="67033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96621" g_stop="96579" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96578" i_stop="96448" i_length="131">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.599" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="96447" g_stop="96369" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="122" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96368" i_stop="96272" i_length="97">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.732" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96271" g_stop="96156" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="123" r_stop="238" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96155" i_stop="95892" i_length="264">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="95891" g_stop="95574" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="555" r_length="317" r_score="0.906"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="95573" i_stop="94830" i_length="744">
            <donor d_prob="0.000" d_score="0.50"/>
            <acceptor a_prob="0.304" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="94829" g_stop="94802" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="583" r_length="28" r_score="0.357"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U313116" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>584</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96621" e_stop="96579"/>
          <exon e_start="96447" e_stop="96369"/>
          <exon e_start="96271" e_stop="96156"/>
          <exon e_start="95891" e_stop="95574"/>
          <exon e_start="94829" e_stop="94802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAAGGTTTGAAAGCATTTATAGACAGTCCAATAATTGGAGAGGTACATATTTTTCTTATATACATTTAAGTGTTTTTTTTAGTATAAATTTATTTATATTATTAATGTAAAAAATTTTAAACTCAAAATTTTATTCACTCTTTTTCCTTTTTCTTTTTCTTTTTAAAAAAAAGATAAGGGGAACTGGTTTAGTACTTTCTACAGAGTTTGTAGATAACAAATCTCCTAATGATCCTTTTCCACCAGAATGGGGTACATTTCTTCCTTTTATTTTTAATCTTCAAATTAAATTAAATTAAATTCTTATTTCTATTTTGTAAATAAATTAATAATTTTTTGTTTAATCAAGGTGTTGGTACATATTTTGGATCACAATGTCAAAAGCATGGTATGTTGGTGAGTTTTTCTGGTGATCATGTAAATATGGCCCCTCCATTCACCTTGAGTCTTGAAGAACTTGATGAGGTAATAAATATCACTTTTCATTTGATAGAAATAATTTAATATGATTTTTTTTGAGTTGAAATATGCCTAAGAGTCAAGAGTCTTGTCGGAAAATAACAAGTTTTAAGGATAAAGTATGCGTTCACTCTATTTATTCGACTCGATATTTTGTTATGATACATTAGTTTCATAAAAGTACAACCATATCTTTTGAATTATAAAAGGTAATATATTAAGGACTTGTTAACATTTTTTTGTGTTTTTATTTTTTATTTTTTTTTGTAGATGATAAGCATATATGGGAAAGCATTGAAGGATACTGAAAAAAGAGTGGAAGAATTGAAGTCTCAGAAGAAGTAAAAATCTCATGAAAAAAAAGTTATTTCAAGTTTAAATAAAAACTTTGTTGTAGTTTTTTTTTTTTTTTTGAGTGTTGCTACTCATAACATAAGAGTGTTTTATTATATTCTATTGTTTTAATGAGAGCAACATTTGAATAAATTGTGTCATTTTTTATTTCAATATGATTGAAATTTTAAATTTCTTTTAAGTGACATCGAGATGGTTAAAAATGATATACAACATTAATAGAATATAACATTGATTGGTTCATATTTTTTGGATCACAATGTGAGAAGTATGAGATGTTTGGTAAGTTTTTCTCATGATCACATAAATATGGCTCTTCCATTCTCTGAGCAAGTAAACCCCCAATTTTGTCGATTTTCGTGTGCTATAGTCCATTGATTTTTAGTGATCCATAATTTCGACATCATTTTTGCTAAGGTTATAAATGAACGTTTGTTAAGACCTTAACTATAGAGTTATTTGGTCACCATGGCCAAAATGACTCATTTTAAAGGTCAAACAAGCCCCTGAAAAGTAAACCCCCTATTTTATCGATTTTCGTGTGCTATAGTCCATTGAGTTTTAGTGATCCATAATTTCGACGTCATTTTTGCTAAGGTTTTACATGAACGTTCGTTAAGATATTTTATTTGGTCATCATGGCCAAAATGACTCATTTTAAAGGTCAAACAAACCCTTGAGAAAGTAAACCTCCATTTTGTCAATTTTGTGTGCTATAATCCATGAATTTTTGGTGATCCAGAATTCCAACGTCATTTTTGTCAAAATTTTACATGGATGACCGTTAAGACCTCACATATGGAGCCAGTTTGTCACCACATGCAAAACGACTAATTTTCAAGGTAAAACAAGCACTATAGAAGGTATACCCCTCATTTTGCTGATTTTCATATGCTATATAGTCCATGGATTTTCGGTCATTCGGAATTCTGACATCATTTTTGACAAATTTTATATAAACGTCTGTTAAGACCTTAGGTATGAAGCAAGTTGGTCACCACAACTA</genome_strand>
        <mrna_strand>AGAAGGTTTGAAAGCATTTATAGACAGTCCAATAATTGGAGAG...................................................................................................................................ATAAGGGGAACTGGTTTAGTACTTTCTACAGAGTTTGTAGATAACAAATCTCCTAATGATCCTTTTCCACCAGAATGGG.................................................................................................GTGTTGGTACATATTTTGGATCACAATGTCAAAAGCATGGTATGTTGGTGAGTTTTTCTGGTGATCATGTAAATATGGCCCCTCCATTCACCTTGAGTCTTGAAGAACTTGATGAG........................................................................................................................................................................................................................................................................ATGATAAGCATATATGGGAAAGCATTGAAGGATACTGAAAAAAGAGTGGAAGAATTGAAGTCTCAGAAGAAGTAAAAATCTCATGAAAAAAAAGTTATTTCAAGTTTAAATAAAAACTTTGTTGTAGTTTTTTTTTTTTTTTTGAGTGTTGCTACTCATAACATAAAAGTGTTTTATTATATTCTATTGTTTTAATGAGAGCAACATTTGAATAAATTGGGTCATTTTTTATTTCAATATGATTGAAATTTTAAATTTCTTTTAA-AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACCCCG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGGGGGGGGGGGACCCCCCCCCCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313117" ref_strand="+" ref_description="SGN-U313117        Tomato 200607 #1 [103 ESTs aligned] arabidopsis/peptide: | Symbol: None | 4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase, identical to gamma-aminobutyrate transaminase subunit precursor (Arabidopsis thaliana) (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434 | chr3:7835165-7839048 FORWARD | Aliases: MKA23.13(evalue: 0, score=714) genbank/nr: gi|19171207|emb|CAD12664.1| viroid RNA-binding protein [Lycopersicon esculentum](evalue: 0, score=939)">
      <seq>gagaactagtctcgagtttttttttttttttttttttttttttttgttttttttttaaatttctggctttatctttctataatttttcaaaaaagcttcaaggaatggccaagactaatggatttatgggacatgatatgttggcaccatttactgcggcatggatgattgatatgggacctttagttatagataaagcggagggttcttatgtctatgacgtaaatggaaagaagtaccttgattctttatctggtttatggtgctcagtattaggggggagtgagcctcgtcttattgaagctgcaaataaacaactcaataaattggcattttaccactcattttggaatcgtaccacaaagccttctttggatcttgcaaaggagctcataaatatgtttactgcaaataagatgggaaaagtttttttcacaagtagtggatcagaagctaatgacactcaggtgaagttggtgtggtattacaacaatgccattgggaggccaaacaaaaagaaaattatttctcgaaaaaatgcataccatggctccacttatatgactgccggtctctccgggcttccatcactacatctaaaatttgatttaccacctccatatattcttcacactgattgccctcattattggaactatcacttgccaggtgagacagaagaggagtactcaactaggttggcaaataatttggaaaatcttatactcaaagagggtcctgaaacagttgctgctttcattgcggaaccagtcatgggaggagcaggtgttataattcctccagctacttatttcgaaaagattcaagctgttttaaagaaatatgacattcttttcatcgcggacgaggtgatatgtggatttggaagacttgggacaatgtttggctgtgataagtacaacattaagcctgatcttgtctctatagcaaaggctctttctggtggatatataccaattggtgctgtgcttgtaagtgaagaaatttctaaggtcataatgtctcaaagcaatcaacttggtgttttttgccatggatttacttattctggacatcctgttgcgtgtgcggttgcattggaagcactaaaaatctataaggaaaaaaatattactgaggtagtgaataaattatcaccaaagtttcaagaaggtttgaaagcatttatagacagtccaataattggagagataaggggaactggtttagtactttctacagagtttgtagataacaaatctcctaatgatccttttccaccagaatggggtgttggtacatattttggatcacaatgtcaaaagcatggtatgttggtgagtttttctggtgatcatgtaaatatggcccctccattcaccttgagtcttgaagaacttgatgagatgataagcatatatgggaaagcattgaaggatactgaaaaaagagtggaagaattgaagtctcagaagaagtaaaaatctcatgaaaaaaaagttatttcaagtttaaataaaaactttgttgtagtttttttttttttttttgagtgttgctactcataacataagagtgttttattatattctattgttttaatgagagcaacatttgaataaattgtgtcattttttatttcaatatgattgaaattttaaatttaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="101642" stop="95334"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101642" g_stop="101614" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="121" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101613" i_stop="101490" i_length="124">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101489" g_stop="101408" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="122" r_stop="203" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101407" i_stop="101106" i_length="302">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101105" g_stop="101033" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="204" r_stop="276" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101032" i_stop="99803" i_length="1230">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99802" g_stop="99705" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="374" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="99704" i_stop="99482" i_length="223">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="99481" g_stop="99389" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="467" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="99388" i_stop="99089" i_length="300">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="99088" g_stop="99015" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="468" r_stop="541" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="99014" i_stop="98902" i_length="113">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="98901" g_stop="98863" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="542" r_stop="580" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="98862" i_stop="98495" i_length="368">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.833" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="98494" g_stop="98406" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="581" r_stop="669" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="98405" i_stop="98279" i_length="127">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="98278" g_stop="98202" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="670" r_stop="746" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="98201" i_stop="97963" i_length="239">
            <donor d_prob="0.973" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="97962" g_stop="97888" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="747" r_stop="821" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="97887" i_stop="97360" i_length="528">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="97359" g_stop="97228" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="822" r_stop="953" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="97227" i_stop="97005" i_length="223">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="97004" g_stop="96917" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="954" r_stop="1041" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="96916" i_stop="96825" i_length="92">
            <donor d_prob="0.888" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="96824" g_stop="96746" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1042" r_stop="1120" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="96745" i_stop="96670" i_length="76">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="96669" g_stop="96579" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1121" r_stop="1211" r_length="91" r_score="1.000"/>
        </exon>
        <intron i_serial="14">
          <gDNA_intron_boundary i_start="96578" i_stop="96448" i_length="131">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.599" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="15">
          <gDNA_exon_boundary g_start="96447" g_stop="96369" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="1212" r_stop="1290" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="15">
          <gDNA_intron_boundary i_start="96368" i_stop="96272" i_length="97">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.732" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="16">
          <gDNA_exon_boundary g_start="96271" g_stop="96156" g_length="116"/>
          <reference_exon_boundary r_type="cDNA" r_start="1291" r_stop="1406" r_length="116" r_score="1.000"/>
        </exon>
        <intron i_serial="16">
          <gDNA_intron_boundary i_start="96155" i_stop="95892" i_length="264">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="17">
          <gDNA_exon_boundary g_start="95891" g_stop="95634" g_length="258"/>
          <reference_exon_boundary r_type="cDNA" r_start="1407" r_stop="1665" r_length="259" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1666" polyA_stop="1685"/>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U313117" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>1572</cumulative_length_of_scored_exons>
        <coverage percentage="0.933" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101642" e_stop="101614"/>
          <exon e_start="101489" e_stop="101408"/>
          <exon e_start="101105" e_stop="101033"/>
          <exon e_start="99802" e_stop="99705"/>
          <exon e_start="99481" e_stop="99389"/>
          <exon e_start="99088" e_stop="99015"/>
          <exon e_start="98901" e_stop="98863"/>
          <exon e_start="98494" e_stop="98406"/>
          <exon e_start="98278" e_stop="98202"/>
          <exon e_start="97962" e_stop="97888"/>
          <exon e_start="97359" e_stop="97228"/>
          <exon e_start="97004" e_stop="96917"/>
          <exon e_start="96824" e_stop="96746"/>
          <exon e_start="96669" e_stop="96579"/>
          <exon e_start="96447" e_stop="96369"/>
          <exon e_start="96271" e_stop="96156"/>
          <exon e_start="95891" e_stop="95634"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTCAAGGAATGGCCAAGACTAATGGGTAAAGTACTCTAAGTCATTCTAAATTGAGGAAAAAATATATTTATTATGATAAAAATATATTTATTATGATAAAGTTCAATTACTTTACTATGATTTTTATTTTTATTTATATAATTTTACAGATTTATGGGACATGATATGTTGGCACCATTTACTGCGGCATGGATGATTGATATGGGACCTTTAGTTATAGATAAAGCGGAGGTTAGATTTTGAGTTTATTTTTGTTACGAATTTTAAGTTATATGTATCGTTAGTATAATTTTAATTTTAATTATTTGAGGTATAATTAACTTTTGAATTATGATCGAAATTTAAATAATGCACTTTAATTGACTAAATTAAGGTGATTTGCTGAGTTTCGATCATAATTTAGGAATATTTATGCCTCATCACTTAATTATTTTGTCATTATGAAAATAAAAATATTTTTTAACTTATATTTTGTTGGTTATTTTTAATATTTAAGATATTTATGTTTTTAATATTTGTGTAATTTGTTATAGGGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTGGTTTATGGTGCTCAGTATTAGGTATTTAATTAATTACAATCCTTAATTATTGCATTATTTGATTTTATTGGCTAATTTTGTCATTCATTTGATTTAATTAATTCCACTAGTTTTCTTTTTTGTTGTTTGTCATGATTTCTATATTTAGAGTCAAATTATAAAAACTTTGATTAATATGTTATTTTTATCATATTAATATGTAAAAAATTACAATTTATGTACTTTTCATGTAATTTAAAAATATCTAGTTTTTTTTTTAAATTTTGAATTAATGTGATCTAATTTAACTTTAAATTATTCAAATTGAGTTTCGAAAAGCACAACATGACAAATAATTTTAAACGAAAGATGTATCAATCAAAATAACAATAATATGAAATTAATTCTTGAAATTTGTAAGGACGATAAATTGGATTTAATTTGGGATTTTTGTTGTTTAGCTACTGAATTTTGTATGGTTTGGCAGTTTCTTATTTTCTAATAATGATTACTGAAAAGAATTAATGTCATTGCATCAATAATCGCGAAATTTTTTAATGATATTTATATAAAGTGTTGATTATAATTATATTTATTATTATTGTTAAATATAATAAAAGGACAATTATATTATTATCACTAAATAATTTTTGCTAAATCTTTTATTTATTGTGTTGCAGGTAAAGTAAACTTAGTTAATTAGGAGATTTATTACTAATTTCTCCTTTAATTAGGACCCCATCATGGATGGACCAACCTAATAATTATTTTTTGATAGTTACGTTTGTGGTGTGTTTGATGGAAAGAAACTTTACTTCAATATCCAATATTTTATTAAATTTTAAAATTTATTTTAATTAGAGTAAGAGAAATATATAAGCAAATAAATTCATTTTTCTCTCTTTTATTAATGTTTATAATTTGATTGCTAAAAATGATTTATTTATTTTTAACAAGGATTTTCCTTCATGCCAAATATTTTACTTTGATTGCAACATGTTGAAAGCTATCTTTGATTATTATAGAAAATTACTTTGGCATTTTGTGAAATTCTTGATTGGATTAATAAGTTATATATTGATATTTGTAGATATTATTTTTTATATTATTAAAATATATATTTATACGTTACGATTAGAAGTTAACTTTCACCATAAAAAGTAGAGTTTTTAATCAGATATTTCGAGTTTAAATTTTAAAATTAAAAATTCTTTTTGTAAAATTAATTTTCGTTTAATGAATCTTACCTAATACGAATCTCGATTATCGTAGGGGGGAGTGAGCCTCGTCTTATTGAAGCTGCAAATAAACAACTCAATAAATTGGCATTTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTGGTATAATACTTCTAAATTTAACTATTAATTTATTAATATTACTCCATCAATCCTAAATATATTTATTTTATTTCTCGAGAATTAAATTATATCAATTTCAATATACAATTTAATTACAAAAGTTGATTAATTTGATTCTCGAGAAATAAAATGTAATAAGTATTTTAGGACAGAAGGAGTAGATTTAACCGATTAATTTATTTTATTTTAAAAATAAATACAGGATCTTGCAAAGGAGCTCATAAATATGTTTACTGCAAATAAGATGGGAAAAGTTTTTTTCACAAGTAGTGGATCAGAAGCTAATGACACTCAGGTTTTATTATTTATTTTTTTTAGCTTATTATATAAATTTAATTTAATTTTTTATAACATGTTATTTATTATTTATTTTAAATTATTATTAGTTCCAGTGTAATTTAAGTCACTTCTGAAATTTGAAAACTTACATATTTATGTTAAGAAAATTCAAACCATTATATTACAATATAATATAATTTTTTTAATAAAGTGAATTTATTATTTACATTGTTTGGTTGTGTAAATATTTTTATGGAGAAGTTTTGAAGGATATTTAATTATTAATCTTTGACTTTTACATGTCAATTATTTATAGGTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGCGTAATCTTTTTTTATTATTTTTTCTAAAAAAATTATTTTTTATATTTTTATTATTTTATTTTTTTTCTACTTTGGCTAATACAATATTCTTTATATATATCACCTTCAAACAGATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGGGTAATATATTGTTCGTTTTATTTTATATGACGATATTTAATTAAGTCTAATTAAATTTTATGTATATTCATTTTTTAATTTATAGTTTTAAGTAGGTTATGATCATTTTAATAATTTACAAAAGATGAAATTAAATAAGTTATCACTATAAATAATAATAAAAAACTCCAATACGTCATAGGAACTGAAAATTCATTTATATCATGTTTGATAAAAAATTATATTATTTATATATGATTAATTGTTTTTTAAATGTATATATGCCATTGTGCTGAGCATTATATTTCATATTTCTATTTTTCAAATCCCATTTAAATATATTAAATTTCAGTATTTATTTTAATCCGTTTAAATTTAATCCAATTCAGGCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAGGTATATTATTATTATTATTGTTGTTGTTGTTATTATTTAATGTCTCTTATATTATATTGAGCTTATATTATATTTTTTTTATATTAATAACTATACATTTTACTAAAAAAAGAAATATGTATGGCAGGTGAGACAGAAGAGGAGTACTCAACTAGGTTGGCAAATAATTTGGAAAATCTTATACTCAAAGAGGGTCCTGAAACAGTAATTTTCTATATACTTTTGTCACTTATTATCAATTTTTTTCGATATTTCGCGTGATGAAGAAACTTTTTATGATAGATATTCAATTCTTTTTTAAAAAATATTTTTTTAGAAAATAATTTAGAAAAGAAATGTAAGAGTGAAAAGTTATACGTAAAAAATATTATCAATCGATATAAATATTAAAAATAATAATAAAAAATCGAAGCATGAGAAAATATTAACATATATTTGTGTAGGTTGCTGCTTTCATTGCGGAACCAGTCATGGGAGGAGCAGGTGTTATAATTCCTCCAGCTACTTATTTCGAAAAGGTCTGGTTTATTATTTTATTCGTCTCAATTTATATTAATAATATTTGATTAGACATAATTTATATTAATAATATTTTATTAGATATAAATTTTGATGAAAAATAAGTTATAGATACATATGGCTACTATACATTTCATTAATGATAAATAGACATTTAAATGTTATAATATTATTAAACATAAGAAAAAAGGATAATTTTTTTTTGAAAATAATTAATACAAAAAGTATTATATAAATTAAGACGGAAAGAGTAATTCGCTGCACCCAATTTATTGTTATTCACCTTGAAAGTTCATTTGATTTGATGCTTTCAAATATTATTGTCCCTAAAATTTATAGTATTTTTTAAAATTATATACACTTCCCATCTCATTTTTTTTTCAATTGTTTTTTTCTAGCAAAATACTTCTTACGTTTTATTTTTCGTAAATAATTATAAGAACATTTTTAGTCATTTAATATTTCATTTTTTTAATTTAAAAAAATAATAACTCATGTCTACTTTTTTATTTTTTATTTTTTTTTAGATTCAAGCTGTTTTAAAGAAATATGACATTCTTTTCATCGCGGACGAGGTGATATGTGGATTTGGAAGACTTGGGACAATGTTTGGCTGTGATAAGTACAACATTAAGCCTGATCTTGTCTCTATAGCAAAGGTAATAAAAATTATAGCGAAATGATTTGACGATCGCTTATTCTTTATATTTACTTATATTCTAAATTCTTCTATTTATCTTTCTATCAATCGAATTAATAAATTTAAACTCTAATTAGAATTAAAATAAGTGTGCTATATAGATATATATATATAATATTTACATAATCAGATCACTTCAAATTCGTAATTCTTAATTTGACTATTTTTAACATTGTTTTAAGGCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTGGTGAGCATATAATATAAATGTGATTGAATATTTACTTAATATATATAGTATTCATCTATTTATATTTTAATAATATTTTTTTCTACAATTAGGTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAAGTACGTATCTAATTAGTTAAATATTTTTTTTATATCGTCAATATACTAAAAATATTTATATTTAATTTTTTTTCAGGGAAAAAAATATTACTGAGGTAGTGAATAAATTATCACCAAAGTTTCAAGAAGGTTTGAAAGCATTTATAGACAGTCCAATAATTGGAGAGGTACATATTTTTCTTATATACATTTAAGTGTTTTTTTTAGTATAAATTTATTTATATTATTAATGTAAAAAATTTTAAACTCAAAATTTTATTCACTCTTTTTCCTTTTTCTTTTTCTTTTTAAAAAAAAGATAAGGGGAACTGGTTTAGTACTTTCTACAGAGTTTGTAGATAACAAATCTCCTAATGATCCTTTTCCACCAGAATGGGGTACATTTCTTCCTTTTATTTTTAATCTTCAAATTAAATTAAATTAAATTCTTATTTCTATTTTGTAAATAAATTAATAATTTTTTGTTTAATCAAGGTGTTGGTACATATTTTGGATCACAATGTCAAAAGCATGGTATGTTGGTGAGTTTTTCTGGTGATCATGTAAATATGGCCCCTCCATTCACCTTGAGTCTTGAAGAACTTGATGAGGTAATAAATATCACTTTTCATTTGATAGAAATAATTTAATATGATTTTTTTTGAGTTGAAATATGCCTAAGAGTCAAGAGTCTTGTCGGAAAATAACAAGTTTTAAGGATAAAGTATGCGTTCACTCTATTTATTCGACTCGATATTTTGTTATGATACATTAGTTTCATAAAAGTACAACCATATCTTTTGAATTATAAAAGGTAATATATTAAGGACTTGTTAACATTTTTTTGTGTTTTTATTTTTTATTTTTTTTTGTAGATGATAAGCATATATGGGAAAGCATTGAAGGATACTGAAAAAAGAGTGGAAGAATTGAAGTCTCAGAAGAAGTAAAAATCTCATGAAAAAAAAGTTATTTCAAGTTTAAATAAAAACTTTGTTGTAG-TTTTTTTTTTTTTTTTGAGTGTTGCTACTCATAACATAAGAGTGTTTTATTATATTCTATTGTTTTAATGAGAGCAACATTTGAATAAATTGTGTCATTTTTTATTTCAATATGATTGAAATTTTAAATTT</genome_strand>
        <mrna_strand>AAGCTTCAAGGAATGGCCAAGACTAATGG............................................................................................................................ATTTATGGGACATGATATGTTGGCACCATTTACTGCGGCATGGATGATTGATATGGGACCTTTAGTTATAGATAAAGCGGAG..............................................................................................................................................................................................................................................................................................................GGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTGGTTTATGGTGCTCAGTATTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGAGTGAGCCTCGTCTTATTGAAGCTGCAAATAAACAACTCAATAAATTGGCATTTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTG...............................................................................................................................................................................................................................GATCTTGCAAAGGAGCTCATAAATATGTTTACTGCAAATAAGATGGGAAAAGTTTTTTTCACAAGTAGTGGATCAGAAGCTAATGACACTCAG............................................................................................................................................................................................................................................................................................................GTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGC.................................................................................................................ATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGG................................................................................................................................................................................................................................................................................................................................................................................GCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAG...............................................................................................................................GTGAGACAGAAGAGGAGTACTCAACTAGGTTGGCAAATAATTTGGAAAATCTTATACTCAAAGAGGGTCCTGAAACA...............................................................................................................................................................................................................................................GTTGCTGCTTTCATTGCGGAACCAGTCATGGGAGGAGCAGGTGTTATAATTCCTCCAGCTACTTATTTCGAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTCAAGCTGTTTTAAAGAAATATGACATTCTTTTCATCGCGGACGAGGTGATATGTGGATTTGGAAGACTTGGGACAATGTTTGGCTGTGATAAGTACAACATTAAGCCTGATCTTGTCTCTATAGCAAAG...............................................................................................................................................................................................................................GCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTG............................................................................................GTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAA............................................................................GGAAAAAAATATTACTGAGGTAGTGAATAAATTATCACCAAAGTTTCAAGAAGGTTTGAAAGCATTTATAGACAGTCCAATAATTGGAGAG...................................................................................................................................ATAAGGGGAACTGGTTTAGTACTTTCTACAGAGTTTGTAGATAACAAATCTCCTAATGATCCTTTTCCACCAGAATGGG.................................................................................................GTGTTGGTACATATTTTGGATCACAATGTCAAAAGCATGGTATGTTGGTGAGTTTTTCTGGTGATCATGTAAATATGGCCCCTCCATTCACCTTGAGTCTTGAAGAACTTGATGAG........................................................................................................................................................................................................................................................................ATGATAAGCATATATGGGAAAGCATTGAAGGATACTGAAAAAAGAGTGGAAGAATTGAAGTCTCAGAAGAAGTAAAAATCTCATGAAAAAAAAGTTATTTCAAGTTTAAATAAAAACTTTGTTGTAGTTTTTTTTTTTTTTTTTGAGTGTTGCTACTCATAACATAAGAGTGTTTTATTATATTCTATTGTTTTAATGAGAGCAACATTTGAATAAATTGTGTCATTTTTTATTTCAATATGATTGAAATTTTAAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334157" ref_strand="+" ref_description="SGN-U334157        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase, identical to gamma-aminobutyrate transaminase subunit precursor (Arabidopsis thaliana) (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434 | chr3:7835165-7839048 FORWARD | Aliases: MKA23.13(evalue: 2e-66, score=246) genbank/nr: gi|19171207|emb|CAD12664.1| viroid RNA-binding protein [Lycopersicon esculentum](evalue: 4e-82, score=308)">
      <seq>ttatttcgaaaagattcaagctgttttaaagaaatatgacattctnnnnatcgncgacgaggtgatatgtggatttggaagacttgggacaatgtttggctgtgataagtacaacattaagcctgatcttgtctctatagcaaaggctctttctggtggatatataccaattggtgctgtgcttgtaagtgaagaaatttctaaggtcataatgtctcaaagcaatcaacttggtgttttttgccatggatttacttattctggacatcctgttgcgtgtgcggttgcattggaagcactaaaaatctataaggaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="97661" stop="96443"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97359" g_stop="97228" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="14" r_stop="145" r_length="132" r_score="0.955"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="97227" i_stop="97005" i_length="223">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97004" g_stop="96917" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="146" r_stop="233" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="96916" i_stop="96825" i_length="92">
            <donor d_prob="0.888" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="96824" g_stop="96746" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="312" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="96745" i_stop="96670" i_length="76">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="96669" g_stop="96661" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="321" r_length="9" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U334157" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>308</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334157" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97359" e_stop="97228"/>
          <exon e_start="97004" e_stop="96917"/>
          <exon e_start="96824" e_stop="96746"/>
          <exon e_start="96669" e_stop="96661"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCAAGCTGTTTTAAAGAAATATGACATTCTTTTCATCGCGGACGAGGTGATATGTGGATTTGGAAGACTTGGGACAATGTTTGGCTGTGATAAGTACAACATTAAGCCTGATCTTGTCTCTATAGCAAAGGTAATAAAAATTATAGCGAAATGATTTGACGATCGCTTATTCTTTATATTTACTTATATTCTAAATTCTTCTATTTATCTTTCTATCAATCGAATTAATAAATTTAAACTCTAATTAGAATTAAAATAAGTGTGCTATATAGATATATATATATAATATTTACATAATCAGATCACTTCAAATTCGTAATTCTTAATTTGACTATTTTTAACATTGTTTTAAGGCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTGGTGAGCATATAATATAAATGTGATTGAATATTTACTTAATATATATAGTATTCATCTATTTATATTTTAATAATATTTTTTTCTACAATTAGGTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAAGTACGTATCTAATTAGTTAAATATTTTTTTTATATCGTCAATATACTAAAAATATTTATATTTAATTTTTTTTCAGGGAAAAAAA</genome_strand>
        <mrna_strand>ATTCAAGCTGTTTTAAAGAAATATGACATTCTNNNNATCGNCGACGAGGTGATATGTGGATTTGGAAGACTTGGGACAATGTTTGGCTGTGATAAGTACAACATTAAGCCTGATCTTGTCTCTATAGCAAAG...............................................................................................................................................................................................................................GCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTG............................................................................................GTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAA............................................................................GGAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334158" ref_strand="+" ref_description="SGN-U334158        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase, identical to gamma-aminobutyrate transaminase subunit precursor (Arabidopsis thaliana) (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434 | chr3:7835165-7839048 FORWARD | Aliases: MKA23.13(evalue: 6e-21, score=56.2) genbank/nr: gi|19171207|emb|CAD12664.1| viroid RNA-binding protein [Lycopersicon esculentum](evalue: 1e-33, score=64.3)">
      <seq>gcacgagcgatcgcttattctttatatttacttatattctaaattcttctatttatctttctatcaatcgaattaataaatttaaactctaattagaattaaaataagtgtgctatatagatatatatatataatatttacataatcagatcacttcaaattcgtaattcttaatttgactatttttaacattgttttaaggctctttctggtggatatataccaattggtgctgtgcttgtaagtgaagaaatttctaaggtcataatgtctcaaagcaatcaacttggtgagcatataatataaatgtgattgaatatttacttaatatatatagtattcatctatttatattttaataatatttgtttctacaattaggtgttttttgccatggatttacttattctggacatcctgttgcgtgtgcggttgcattggaagcactaaaaatctataagtacgtatctaattagttaaatattctttttatatcgtcaatatactaaaaatattcatatttaattttttttcagggaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="97500" stop="96363"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97205" g_stop="96663" g_length="543"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="543" r_length="543" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U334158" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334158" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97205" e_stop="96663"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTGACGATCGCTTATTCTTTATATTTACTTATATTCTAAATTCTTCTATTTATCTTTCTATCAATCGAATTAATAAATTTAAACTCTAATTAGAATTAAAATAAGTGTGCTATATAGATATATATATATAATATTTACATAATCAGATCACTTCAAATTCGTAATTCTTAATTTGACTATTTTTAACATTGTTTTAAGGCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTGGTGAGCATATAATATAAATGTGATTGAATATTTACTTAATATATATAGTATTCATCTATTTATATTTTAATAATATTTTTTTCTACAATTAGGTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAAGTACGTATCTAATTAGTTAAATATTTTTTTTATATCGTCAATATACTAAAAATATTTATATTTAATTTTTTTTCAGGGAAAAA</genome_strand>
        <mrna_strand>GCACGAGCGATCGCTTATTCTTTATATTTACTTATATTCTAAATTCTTCTATTTATCTTTCTATCAATCGAATTAATAAATTTAAACTCTAATTAGAATTAAAATAAGTGTGCTATATAGATATATATATATAATATTTACATAATCAGATCACTTCAAATTCGTAATTCTTAATTTGACTATTTTTAACATTGTTTTAAGGCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTGGTGAGCATATAATATAAATGTGATTGAATATTTACTTAATATATATAGTATTCATCTATTTATATTTTAATAATATTTGTTTCTACAATTAGGTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAAGTACGTATCTAATTAGTTAAATATTCTTTTTATATCGTCAATATACTAAAAATATTCATATTTAATTTTTTTTCAGGGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334161" ref_strand="+" ref_description="SGN-U334161        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase, identical to gamma-aminobutyrate transaminase subunit precursor (Arabidopsis thaliana) (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434 | chr3:7835165-7839048 FORWARD | Aliases: MKA23.13(evalue: 3e-39, score=149) genbank/nr: gi|29837284|gb|AAO92256.1| gamma-aminobutyrate transaminase subunit precursor isozyme 2 [Lycopersicon esculentum](evalue: 8e-53, score=191)">
      <seq>aaaatcttatactcaaagagggtctgaaacagtgctgctttattgcgaaccagcatgggaggagcaggtttaattctcactcttatttgaaaagattaagctgtttaaaaaatatgacattttttatcgcggacgaggtgatatgtggatttggaagacttggggacaatgtttggctgtgataagtacaacattaagcctgatcttgtctctatagcaaaggctctttctggtggatatataccaattggtgctgtgcttgtaagtgaagaaatttctaaggtcataatgtctcaaagcaatcaacttggtgttttttgccatggatttacttattctggaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="98533" stop="96491"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="98233" g_stop="98202" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="98201" i_stop="97963" i_length="239">
            <donor d_prob="0.973" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.86"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97962" g_stop="97888" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="94" r_length="63" r_score="0.840"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="97887" i_stop="97360" i_length="528">
            <donor d_prob="0.999" d_score="0.82"/>
            <acceptor a_prob="0.990" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="97359" g_stop="97228" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="222" r_length="128" r_score="0.947"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="97227" i_stop="97005" i_length="223">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.935" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="97004" g_stop="96917" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="310" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="96916" i_stop="96825" i_length="92">
            <donor d_prob="0.888" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="96824" g_stop="96791" g_length="34"/>
          <reference_exon_boundary r_type="cDNA" r_start="311" r_stop="344" r_length="34" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U334161" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>361</cumulative_length_of_scored_exons>
        <coverage percentage="1.049" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334161" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="98233" e_stop="98202"/>
          <exon e_start="97962" e_stop="97888"/>
          <exon e_start="97359" e_stop="97228"/>
          <exon e_start="97004" e_stop="96917"/>
          <exon e_start="96824" e_stop="96791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATCTTATACTCAAAGAGGGTCCTGAAACAGTAATTTTCTATATACTTTTGTCACTTATTATCAATTTTTTTCGATATTTCGCGTGATGAAGAAACTTTTTATGATAGATATTCAATTCTTTTTTAAAAAATATTTTTTTAGAAAATAATTTAGAAAAGAAATGTAAGAGTGAAAAGTTATACGTAAAAAATATTATCAATCGATATAAATATTAAAAATAATAATAAAAAATCGAAGCATGAGAAAATATTAACATATATTTGTGTAGGTTGCTGCTTTCATTGCGGAACCAGTCATGGGAGGAGCAGGTGTTATAATTCCTCCAGCTACTTATTTCGAAAAGGTCTGGTTTATTATTTTATTCGTCTCAATTTATATTAATAATATTTGATTAGACATAATTTATATTAATAATATTTTATTAGATATAAATTTTGATGAAAAATAAGTTATAGATACATATGGCTACTATACATTTCATTAATGATAAATAGACATTTAAATGTTATAATATTATTAAACATAAGAAAAAAGGATAATTTTTTTTTGAAAATAATTAATACAAAAAGTATTATATAAATTAAGACGGAAAGAGTAATTCGCTGCACCCAATTTATTGTTATTCACCTTGAAAGTTCATTTGATTTGATGCTTTCAAATATTATTGTCCCTAAAATTTATAGTATTTTTTAAAATTATATACACTTCCCATCTCATTTTTTTTTCAATTGTTTTTTTCTAGCAAAATACTTCTTACGTTTTATTTTTCGTAAATAATTATAAGAACATTTTTAGTCATTTAATATTTCATTTTTTTAATTTAAAAAAATAATAACTCATGTCTACTTTTTTATTTTTTATTTTTTTTTAGATTCAAGCTGTTTTAAAGAAATATGACATTCTTTTCATCGCGGACGAGGTGATATGTGGATTTGGAAGACTT-GGGACAATGTTTGGCTGTGATAAGTACAACATTAAGCCTGATCTTGTCTCTATAGCAAAGGTAATAAAAATTATAGCGAAATGATTTGACGATCGCTTATTCTTTATATTTACTTATATTCTAAATTCTTCTATTTATCTTTCTATCAATCGAATTAATAAATTTAAACTCTAATTAGAATTAAAATAAGTGTGCTATATAGATATATATATATAATATTTACATAATCAGATCACTTCAAATTCGTAATTCTTAATTTGACTATTTTTAACATTGTTTTAAGGCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTGGTGAGCATATAATATAAATGTGATTGAATATTTACTTAATATATATAGTATTCATCTATTTATATTTTAATAATATTTTTTTCTACAATTAGGTGTTTTTTGCCATGGATTTACTTATTCTGGACA</genome_strand>
        <mrna_strand>AAAATCTTATACTCAAAGAGGGT-CTGAAACA...............................................................................................................................................................................................................................................G-TGCTGCTTT-ATTGCG-AACCAG-CATGGGAGGAGCA-G-GTT-TAATT-CT-CA-CT-CTTATTT-GAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATT-AAGCTGTT-TAAA-AAATATGACATT-TTTT-ATCGCGGACGAGGTGATATGTGGATTTGGAAGACTTGGGGACAATGTTTGGCTGTGATAAGTACAACATTAAGCCTGATCTTGTCTCTATAGCAAAG...............................................................................................................................................................................................................................GCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTG............................................................................................GTGTTTTTTGCCATGGATTTACTTATTCTGGACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334159" ref_strand="+" ref_description="SGN-U334159        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase, identical to gamma-aminobutyrate transaminase subunit precursor (Arabidopsis thaliana) (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434 | chr3:7835165-7839048 FORWARD | Aliases: MKA23.13(evalue: 4e-100, score=361) genbank/nr: gi|19171207|emb|CAD12664.1| viroid RNA-binding protein [Lycopersicon esculentum](evalue: 1e-134, score=482)">
      <seq>tataatttttcaaaaaagcttcaaggaatggccaagactaatggatttatgggacatgatatgttggcaccatttactgcggcatggatgattgatatgggacctttagttatagataaagcggagggttcttatgtctatgacgtaaatggaaagaagtaccttgattctttatctggtttatggtgctcagtattaggggggagtgagcctcgtcttattgaagctgcaaataaacaactcaataaattggcattttaccactcattttggaatcgtaccacaaagccttctttggtgaagttggtgtggtattacaacaatgccattgggaggccaaacaaaaagaaaattatttctcgaaaaaatgcataccatggctccacttatatgactgccggtctctccgggcttccatcactacatctaaaatttgatttaccacctccatatattcttcacactgattgccctcattattggaactatcacttgccaggtgagacagaagaagagtactcaactaggttggcaaataatttggaaaatcttatactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="101642" stop="97920"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101642" g_stop="101614" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="44" r_length="29" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101613" i_stop="101490" i_length="124">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101489" g_stop="101408" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="126" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101407" i_stop="101106" i_length="302">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="101105" g_stop="101033" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="127" r_stop="199" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="101032" i_stop="99803" i_length="1230">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99802" g_stop="99705" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="200" r_stop="297" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="99704" i_stop="99089" i_length="616">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="99088" g_stop="99015" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="371" r_length="74" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="99014" i_stop="98902" i_length="113">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98901" g_stop="98863" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="410" r_length="39" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="98862" i_stop="98495" i_length="368">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.833" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="98494" g_stop="98406" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="499" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="98405" i_stop="98279" i_length="127">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="98278" g_stop="98220" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="558" r_length="59" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U334159" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334159" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101642" e_stop="101614"/>
          <exon e_start="101489" e_stop="101408"/>
          <exon e_start="101105" e_stop="101033"/>
          <exon e_start="99802" e_stop="99705"/>
          <exon e_start="99088" e_stop="99015"/>
          <exon e_start="98901" e_stop="98863"/>
          <exon e_start="98494" e_stop="98406"/>
          <exon e_start="98278" e_stop="98220"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGCTTCAAGGAATGGCCAAGACTAATGGGTAAAGTACTCTAAGTCATTCTAAATTGAGGAAAAAATATATTTATTATGATAAAAATATATTTATTATGATAAAGTTCAATTACTTTACTATGATTTTTATTTTTATTTATATAATTTTACAGATTTATGGGACATGATATGTTGGCACCATTTACTGCGGCATGGATGATTGATATGGGACCTTTAGTTATAGATAAAGCGGAGGTTAGATTTTGAGTTTATTTTTGTTACGAATTTTAAGTTATATGTATCGTTAGTATAATTTTAATTTTAATTATTTGAGGTATAATTAACTTTTGAATTATGATCGAAATTTAAATAATGCACTTTAATTGACTAAATTAAGGTGATTTGCTGAGTTTCGATCATAATTTAGGAATATTTATGCCTCATCACTTAATTATTTTGTCATTATGAAAATAAAAATATTTTTTAACTTATATTTTGTTGGTTATTTTTAATATTTAAGATATTTATGTTTTTAATATTTGTGTAATTTGTTATAGGGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTGGTTTATGGTGCTCAGTATTAGGTATTTAATTAATTACAATCCTTAATTATTGCATTATTTGATTTTATTGGCTAATTTTGTCATTCATTTGATTTAATTAATTCCACTAGTTTTCTTTTTTGTTGTTTGTCATGATTTCTATATTTAGAGTCAAATTATAAAAACTTTGATTAATATGTTATTTTTATCATATTAATATGTAAAAAATTACAATTTATGTACTTTTCATGTAATTTAAAAATATCTAGTTTTTTTTTTAAATTTTGAATTAATGTGATCTAATTTAACTTTAAATTATTCAAATTGAGTTTCGAAAAGCACAACATGACAAATAATTTTAAACGAAAGATGTATCAATCAAAATAACAATAATATGAAATTAATTCTTGAAATTTGTAAGGACGATAAATTGGATTTAATTTGGGATTTTTGTTGTTTAGCTACTGAATTTTGTATGGTTTGGCAGTTTCTTATTTTCTAATAATGATTACTGAAAAGAATTAATGTCATTGCATCAATAATCGCGAAATTTTTTAATGATATTTATATAAAGTGTTGATTATAATTATATTTATTATTATTGTTAAATATAATAAAAGGACAATTATATTATTATCACTAAATAATTTTTGCTAAATCTTTTATTTATTGTGTTGCAGGTAAAGTAAACTTAGTTAATTAGGAGATTTATTACTAATTTCTCCTTTAATTAGGACCCCATCATGGATGGACCAACCTAATAATTATTTTTTGATAGTTACGTTTGTGGTGTGTTTGATGGAAAGAAACTTTACTTCAATATCCAATATTTTATTAAATTTTAAAATTTATTTTAATTAGAGTAAGAGAAATATATAAGCAAATAAATTCATTTTTCTCTCTTTTATTAATGTTTATAATTTGATTGCTAAAAATGATTTATTTATTTTTAACAAGGATTTTCCTTCATGCCAAATATTTTACTTTGATTGCAACATGTTGAAAGCTATCTTTGATTATTATAGAAAATTACTTTGGCATTTTGTGAAATTCTTGATTGGATTAATAAGTTATATATTGATATTTGTAGATATTATTTTTTATATTATTAAAATATATATTTATACGTTACGATTAGAAGTTAACTTTCACCATAAAAAGTAGAGTTTTTAATCAGATATTTCGAGTTTAAATTTTAAAATTAAAAATTCTTTTTGTAAAATTAATTTTCGTTTAATGAATCTTACCTAATACGAATCTCGATTATCGTAGGGGGGAGTGAGCCTCGTCTTATTGAAGCTGCAAATAAACAACTCAATAAATTGGCATTTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTGGTATAATACTTCTAAATTTAACTATTAATTTATTAATATTACTCCATCAATCCTAAATATATTTATTTTATTTCTCGAGAATTAAATTATATCAATTTCAATATACAATTTAATTACAAAAGTTGATTAATTTGATTCTCGAGAAATAAAATGTAATAAGTATTTTAGGACAGAAGGAGTAGATTTAACCGATTAATTTATTTTATTTTAAAAATAAATACAGGATCTTGCAAAGGAGCTCATAAATATGTTTACTGCAAATAAGATGGGAAAAGTTTTTTTCACAAGTAGTGGATCAGAAGCTAATGACACTCAGGTTTTATTATTTATTTTTTTTAGCTTATTATATAAATTTAATTTAATTTTTTATAACATGTTATTTATTATTTATTTTAAATTATTATTAGTTCCAGTGTAATTTAAGTCACTTCTGAAATTTGAAAACTTACATATTTATGTTAAGAAAATTCAAACCATTATATTACAATATAATATAATTTTTTTAATAAAGTGAATTTATTATTTACATTGTTTGGTTGTGTAAATATTTTTATGGAGAAGTTTTGAAGGATATTTAATTATTAATCTTTGACTTTTACATGTCAATTATTTATAGGTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGCGTAATCTTTTTTTATTATTTTTTCTAAAAAAATTATTTTTTATATTTTTATTATTTTATTTTTTTTCTACTTTGGCTAATACAATATTCTTTATATATATCACCTTCAAACAGATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGGGTAATATATTGTTCGTTTTATTTTATATGACGATATTTAATTAAGTCTAATTAAATTTTATGTATATTCATTTTTTAATTTATAGTTTTAAGTAGGTTATGATCATTTTAATAATTTACAAAAGATGAAATTAAATAAGTTATCACTATAAATAATAATAAAAAACTCCAATACGTCATAGGAACTGAAAATTCATTTATATCATGTTTGATAAAAAATTATATTATTTATATATGATTAATTGTTTTTTAAATGTATATATGCCATTGTGCTGAGCATTATATTTCATATTTCTATTTTTCAAATCCCATTTAAATATATTAAATTTCAGTATTTATTTTAATCCGTTTAAATTTAATCCAATTCAGGCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAGGTATATTATTATTATTATTGTTGTTGTTGTTATTATTTAATGTCTCTTATATTATATTGAGCTTATATTATATTTTTTTTATATTAATAACTATACATTTTACTAAAAAAAGAAATATGTATGGCAGGTGAGACAGAAGAGGAGTACTCAACTAGGTTGGCAAATAATTTGGAAAATCTTATACTC</genome_strand>
        <mrna_strand>AAGCTTCAAGGAATGGCCAAGACTAATGG............................................................................................................................ATTTATGGGACATGATATGTTGGCACCATTTACTGCGGCATGGATGATTGATATGGGACCTTTAGTTATAGATAAAGCGGAG..............................................................................................................................................................................................................................................................................................................GGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTGGTTTATGGTGCTCAGTATTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGAGTGAGCCTCGTCTTATTGAAGCTGCAAATAAACAACTCAATAAATTGGCATTTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGC.................................................................................................................ATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGG................................................................................................................................................................................................................................................................................................................................................................................GCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAG...............................................................................................................................GTGAGACAGAAGAAGAGTACTCAACTAGGTTGGCAAATAATTTGGAAAATCTTATACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334162" ref_strand="+" ref_description="SGN-U334162        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase, identical to gamma-aminobutyrate transaminase subunit precursor (Arabidopsis thaliana) (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434 | chr3:7835165-7839048 FORWARD | Aliases: MKA23.13(evalue: 3e-65, score=152) genbank/nr: gi|19171207|emb|CAD12664.1| viroid RNA-binding protein [Lycopersicon esculentum](evalue: 3e-81, score=191)">
      <seq>tttaccactcattttggaatcgtaccacaaagccttctttggatcttgcaaaggagctcataaatatgtttactgcaaataagatgggaaaagtttttttttcacaagtagtggatcagaagctaatgacactcaggtgaagttggtgtggtattacaacaatgccattgggaggccaaacaaaaagaaaattatttctcgaaaaaatgcgtaatctttttttattattttttctaaaaaaattattttttatatttttattattttattttttttctactttggctaatacaatattctttatatatatcaccttcaaacagataccatggctccacttatatgactgccggtctctccgggcttccatcactacatctaaaatttgatttaccacctccatatattcttcacactgattgccctcattattggaactatcacttgccaggtgagacagaagaggagtactcaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="100045" stop="97954"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="99745" g_stop="99705" g_length="41"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="41" r_length="41" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="99704" i_stop="99482" i_length="223">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="99481" g_stop="99389" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="42" r_stop="136" r_length="95" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="99388" i_stop="99089" i_length="300">
            <donor d_prob="0.993" d_score="0.92"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99088" g_stop="98863" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="137" r_stop="362" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="98862" i_stop="98495" i_length="368">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.833" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="98494" g_stop="98406" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="363" r_stop="451" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="98405" i_stop="98279" i_length="127">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="98278" g_stop="98254" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="452" r_stop="476" r_length="25" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U334162" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>474</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334162" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="99745" e_stop="99705"/>
          <exon e_start="99481" e_stop="99389"/>
          <exon e_start="99088" e_stop="98863"/>
          <exon e_start="98494" e_stop="98406"/>
          <exon e_start="98278" e_stop="98254"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTGGTATAATACTTCTAAATTTAACTATTAATTTATTAATATTACTCCATCAATCCTAAATATATTTATTTTATTTCTCGAGAATTAAATTATATCAATTTCAATATACAATTTAATTACAAAAGTTGATTAATTTGATTCTCGAGAAATAAAATGTAATAAGTATTTTAGGACAGAAGGAGTAGATTTAACCGATTAATTTATTTTATTTTAAAAATAAATACAGGATCTTGCAAAGGAGCTCATAAATATGTTTACTGCAAATAAGATGGGAAAAG--TTTTTTTCACAAGTAGTGGATCAGAAGCTAATGACACTCAGGTTTTATTATTTATTTTTTTTAGCTTATTATATAAATTTAATTTAATTTTTTATAACATGTTATTTATTATTTATTTTAAATTATTATTAGTTCCAGTGTAATTTAAGTCACTTCTGAAATTTGAAAACTTACATATTTATGTTAAGAAAATTCAAACCATTATATTACAATATAATATAATTTTTTTAATAAAGTGAATTTATTATTTACATTGTTTGGTTGTGTAAATATTTTTATGGAGAAGTTTTGAAGGATATTTAATTATTAATCTTTGACTTTTACATGTCAATTATTTATAGGTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGCGTAATCTTTTTTTATTATTTTTTCTAAAAAAATTATTTTTTATATTTTTATTATTTTATTTTTTTTCTACTTTGGCTAATACAATATTCTTTATATATATCACCTTCAAACAGATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGGGTAATATATTGTTCGTTTTATTTTATATGACGATATTTAATTAAGTCTAATTAAATTTTATGTATATTCATTTTTTAATTTATAGTTTTAAGTAGGTTATGATCATTTTAATAATTTACAAAAGATGAAATTAAATAAGTTATCACTATAAATAATAATAAAAAACTCCAATACGTCATAGGAACTGAAAATTCATTTATATCATGTTTGATAAAAAATTATATTATTTATATATGATTAATTGTTTTTTAAATGTATATATGCCATTGTGCTGAGCATTATATTTCATATTTCTATTTTTCAAATCCCATTTAAATATATTAAATTTCAGTATTTATTTTAATCCGTTTAAATTTAATCCAATTCAGGCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAGGTATATTATTATTATTATTGTTGTTGTTGTTATTATTTAATGTCTCTTATATTATATTGAGCTTATATTATATTTTTTTTATATTAATAACTATACATTTTACTAAAAAAAGAAATATGTATGGCAGGTGAGACAGAAGAGGAGTACTCAAC</genome_strand>
        <mrna_strand>TTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTG...............................................................................................................................................................................................................................GATCTTGCAAAGGAGCTCATAAATATGTTTACTGCAAATAAGATGGGAAAAGTTTTTTTTTCACAAGTAGTGGATCAGAAGCTAATGACACTCAG............................................................................................................................................................................................................................................................................................................GTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGCGTAATCTTTTTTTATTATTTTTTCTAAAAAAATTATTTTTTATATTTTTATTATTTTATTTTTTTTCTACTTTGGCTAATACAATATTCTTTATATATATCACCTTCAAACAGATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGG................................................................................................................................................................................................................................................................................................................................................................................GCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAG...............................................................................................................................GTGAGACAGAAGAGGAGTACTCAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334156" ref_strand="+" ref_description="SGN-U334156        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | 4-aminobutyrate aminotransferase / gamma-amino-N-butyrate transaminase / GABA transaminase / beta-alanine--oxoglutarate aminotransferase, identical to gamma-aminobutyrate transaminase subunit precursor (Arabidopsis thaliana) (EC 2.6.1.19) GI:14030435; contains Pfam profile PF00202: aminotransferase, class III; identical to cDNA gamma-aminobutyrate transaminase subunit precursor, nuclear gene for mitochondrial product GI:14030434 | chr3:7835165-7839048 FORWARD | Aliases: MKA23.13(evalue: 1e-85, score=313) genbank/nr: gi|19171207|emb|CAD12664.1| viroid RNA-binding protein [Lycopersicon esculentum](evalue: 7e-107, score=387)">
      <seq>atatgtgggcaccatttactgcggggtggatgatggatatgggacctttaattatagataaagcggagggttcttatgtctatgacgtaaatggaaagaagtaccttgattctttatctggtttatggtgctcagtattaggggggagtgagcctcttcttattggagctgcttattaacaactcaataaattggcattttaccactcattttggaatagtaccacaaacccttctttggatcttgcaaaggagctcataactatgtttactgcaaataagatgggaaaagttttttgcacaagtagtggatcacatgctaatgacactcacgtgaaaatggtgtggtattacaacaatgccattgggaggccaagcaaaaagaacattgtttgtcgaaagaatgcataccatggctgcacttat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0131G17-LFFth/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C12HBa0131G17.1" temp_strand="-" temp_description="C12HBa0131G17.1  AC216292.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0131G17 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="101642" stop="98712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101475" g_stop="101408" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="68" r_length="68" r_score="0.926"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101407" i_stop="101106" i_length="302">
            <donor d_prob="0.997" d_score="0.92"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="101105" g_stop="101033" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="69" r_stop="141" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="101032" i_stop="99803" i_length="1230">
            <donor d_prob="0.760" d_score="1.00"/>
            <acceptor a_prob="0.978" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="99802" g_stop="99705" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="239" r_length="98" r_score="0.929"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="99704" i_stop="99482" i_length="223">
            <donor d_prob="0.974" d_score="0.96"/>
            <acceptor a_prob="0.984" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="99481" g_stop="99389" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="240" r_stop="332" r_length="93" r_score="0.946"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="99388" i_stop="99089" i_length="300">
            <donor d_prob="0.993" d_score="0.92"/>
            <acceptor a_prob="0.994" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="99088" g_stop="99015" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="333" r_stop="406" r_length="74" r_score="0.905"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="99014" i_stop="98902" i_length="113">
            <donor d_prob="0.997" d_score="0.90"/>
            <acceptor a_prob="0.966" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="98901" g_stop="98883" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="425" r_length="19" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0131G17.1" gen_strand="-" ref_id="SGN-U334156" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0131G17.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101475" e_stop="101408"/>
          <exon e_start="101105" e_stop="101033"/>
          <exon e_start="99802" e_stop="99705"/>
          <exon e_start="99481" e_stop="99389"/>
          <exon e_start="99088" e_stop="99015"/>
          <exon e_start="98901" e_stop="98883"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGTTGGCACCATTTACTGCGGCATGGATGATTGATATGGGACCTTTAGTTATAGATAAAGCGGAGGTTAGATTTTGAGTTTATTTTTGTTACGAATTTTAAGTTATATGTATCGTTAGTATAATTTTAATTTTAATTATTTGAGGTATAATTAACTTTTGAATTATGATCGAAATTTAAATAATGCACTTTAATTGACTAAATTAAGGTGATTTGCTGAGTTTCGATCATAATTTAGGAATATTTATGCCTCATCACTTAATTATTTTGTCATTATGAAAATAAAAATATTTTTTAACTTATATTTTGTTGGTTATTTTTAATATTTAAGATATTTATGTTTTTAATATTTGTGTAATTTGTTATAGGGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTGGTTTATGGTGCTCAGTATTAGGTATTTAATTAATTACAATCCTTAATTATTGCATTATTTGATTTTATTGGCTAATTTTGTCATTCATTTGATTTAATTAATTCCACTAGTTTTCTTTTTTGTTGTTTGTCATGATTTCTATATTTAGAGTCAAATTATAAAAACTTTGATTAATATGTTATTTTTATCATATTAATATGTAAAAAATTACAATTTATGTACTTTTCATGTAATTTAAAAATATCTAGTTTTTTTTTTAAATTTTGAATTAATGTGATCTAATTTAACTTTAAATTATTCAAATTGAGTTTCGAAAAGCACAACATGACAAATAATTTTAAACGAAAGATGTATCAATCAAAATAACAATAATATGAAATTAATTCTTGAAATTTGTAAGGACGATAAATTGGATTTAATTTGGGATTTTTGTTGTTTAGCTACTGAATTTTGTATGGTTTGGCAGTTTCTTATTTTCTAATAATGATTACTGAAAAGAATTAATGTCATTGCATCAATAATCGCGAAATTTTTTAATGATATTTATATAAAGTGTTGATTATAATTATATTTATTATTATTGTTAAATATAATAAAAGGACAATTATATTATTATCACTAAATAATTTTTGCTAAATCTTTTATTTATTGTGTTGCAGGTAAAGTAAACTTAGTTAATTAGGAGATTTATTACTAATTTCTCCTTTAATTAGGACCCCATCATGGATGGACCAACCTAATAATTATTTTTTGATAGTTACGTTTGTGGTGTGTTTGATGGAAAGAAACTTTACTTCAATATCCAATATTTTATTAAATTTTAAAATTTATTTTAATTAGAGTAAGAGAAATATATAAGCAAATAAATTCATTTTTCTCTCTTTTATTAATGTTTATAATTTGATTGCTAAAAATGATTTATTTATTTTTAACAAGGATTTTCCTTCATGCCAAATATTTTACTTTGATTGCAACATGTTGAAAGCTATCTTTGATTATTATAGAAAATTACTTTGGCATTTTGTGAAATTCTTGATTGGATTAATAAGTTATATATTGATATTTGTAGATATTATTTTTTATATTATTAAAATATATATTTATACGTTACGATTAGAAGTTAACTTTCACCATAAAAAGTAGAGTTTTTAATCAGATATTTCGAGTTTAAATTTTAAAATTAAAAATTCTTTTTGTAAAATTAATTTTCGTTTAATGAATCTTACCTAATACGAATCTCGATTATCGTAGGGGGGAGTGAGCCTCGTCTTATTGAAGCTGCAAATAAACAACTCAATAAATTGGCATTTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTGGTATAATACTTCTAAATTTAACTATTAATTTATTAATATTACTCCATCAATCCTAAATATATTTATTTTATTTCTCGAGAATTAAATTATATCAATTTCAATATACAATTTAATTACAAAAGTTGATTAATTTGATTCTCGAGAAATAAAATGTAATAAGTATTTTAGGACAGAAGGAGTAGATTTAACCGATTAATTTATTTTATTTTAAAAATAAATACAGGATCTTGCAAAGGAGCTCATAAATATGTTTACTGCAAATAAGATGGGAAAAGTTTTTTTCACAAGTAGTGGATCAGAAGCTAATGACACTCAGGTTTTATTATTTATTTTTTTTAGCTTATTATATAAATTTAATTTAATTTTTTATAACATGTTATTTATTATTTATTTTAAATTATTATTAGTTCCAGTGTAATTTAAGTCACTTCTGAAATTTGAAAACTTACATATTTATGTTAAGAAAATTCAAACCATTATATTACAATATAATATAATTTTTTTAATAAAGTGAATTTATTATTTACATTGTTTGGTTGTGTAAATATTTTTATGGAGAAGTTTTGAAGGATATTTAATTATTAATCTTTGACTTTTACATGTCAATTATTTATAGGTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGCGTAATCTTTTTTTATTATTTTTTCTAAAAAAATTATTTTTTATATTTTTATTATTTTATTTTTTTTCTACTTTGGCTAATACAATATTCTTTATATATATCACCTTCAAACAGATACCATGGCTCCACTTAT</genome_strand>
        <mrna_strand>ATATGTGGGCACCATTTACTGCGGGGTGGATGATGGATATGGGACCTTTAATTATAGATAAAGCGGAG..............................................................................................................................................................................................................................................................................................................GGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTGGTTTATGGTGCTCAGTATTAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGGAGTGAGCCTCTTCTTATTGGAGCTGCTTATTAACAACTCAATAAATTGGCATTTTACCACTCATTTTGGAATAGTACCACAAACCCTTCTTTG...............................................................................................................................................................................................................................GATCTTGCAAAGGAGCTCATAACTATGTTTACTGCAAATAAGATGGGAAAAGTTTTTTGCACAAGTAGTGGATCACATGCTAATGACACTCAC............................................................................................................................................................................................................................................................................................................GTGAAAATGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAGCAAAAAGAACATTGTTTGTCGAAAGAATGC.................................................................................................................ATACCATGGCTGCACTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>20</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="7665" PGL_stop="2347"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7665" e_stop="7531"/>
            <exon e_start="5650" e_stop="5538"/>
            <exon e_start="4970" e_stop="4899"/>
            <exon e_start="4512" e_stop="4477"/>
            <exon e_start="3832" e_stop="3787"/>
            <exon e_start="3452" e_stop="3365"/>
            <exon e_start="2684" e_stop="2627"/>
            <exon e_start="2509" e_stop="2347"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.859" acc_prob="0.892" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.992" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.920" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7665" e_stop="7531" e_length="135"/>
          </exon>
          <intron i_serial="1" don_prob="0.859" acc_prob="0.892">
            <gDNA_intron_boundary i_start="7530" i_stop="5651" i_length="1880"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="5650" e_stop="5538" e_length="113"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="5537" i_stop="4971" i_length="567"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4970" e_stop="4899" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="0.984" acc_prob="0.992">
            <gDNA_intron_boundary i_start="4898" i_stop="4513" i_length="386"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="4512" e_stop="4477" e_length="36"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.999">
            <gDNA_intron_boundary i_start="4476" i_stop="3833" i_length="644"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="3832" e_stop="3787" e_length="46"/>
          </exon>
          <intron i_serial="5" don_prob="0.989" acc_prob="0.990">
            <gDNA_intron_boundary i_start="3786" i_stop="3453" i_length="334"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="3452" e_stop="3365" e_length="88"/>
          </exon>
          <intron i_serial="6" don_prob="0.920" acc_prob="0.996">
            <gDNA_intron_boundary i_start="3364" i_stop="2685" i_length="680"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="2684" e_stop="2627" e_length="58"/>
          </exon>
          <intron i_serial="7" don_prob="0.985" acc_prob="0.977">
            <gDNA_intron_boundary i_start="2626" i_stop="2510" i_length="117"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="2509" e_stop="2347" e_length="163"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7665" stop="7531"/>
              <exon start="5650" stop="5538"/>
              <exon start="4970" stop="4899"/>
              <exon start="4512" stop="4477"/>
              <exon start="3832" stop="3787"/>
              <exon start="3452" stop="3365"/>
              <exon start="2684" stop="2627"/>
              <exon start="2509" stop="2347"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321867" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7638" stop="7531"/>
              <exon start="5650" stop="5538"/>
              <exon start="4970" stop="4899"/>
              <exon start="4512" stop="4477"/>
              <exon start="3832" stop="3787"/>
              <exon start="3452" stop="3365"/>
              <exon start="2684" stop="2627"/>
              <exon start="2509" stop="2351"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321868" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTTATTGATTTCAGACCAAAAGGAGAAACAGAGAAGAAAACAGAGAGACGCAAAAATGGGATGGATCGGAGAGCAAATCGATTCGATAAAGTCAATTCAGTACAGACAACTCGTAACTCAAGCAATCAGTCTTG : GGATGATTGTTACGTCAGCACTTATAATATGGAAAGCATTGATGTGTGTAACTGGCAGCGAGTCACCTGTGGTGGTTGTGCTCTCTGGAAGTATGGAACCAGGCTTTAAAAGG : GGTGACATTCTTTTCTTGCATATGAGCAAGGACCCTATTCGTGCGGGAGAAATTGTTGTGTTTAATGTTGAT : GGACGTGAAATTCCAATTGTTCATAGAGTAATAAAG : GTTCACGAGCGCAAAGACACTGGAGAAGTTAACGTCCTTACAAAAG : GAGACAACAACTTTGGTGATGACAGACTTCTATATGCTCAAGGTCAACTCTGGCTGCAACGTCATCACATCATGGGGAGAGCTGTTGG : GTTCTTGCCTTATGTTGGTTGGGTAACGATAATCATGACCGAAAAACCAATTATCAAG : TATATATTGATAGGTGCATTGGGATTGTTGGTCATCACATCAAAAGATTAGTGGACAATGGCTTCCTTCAGTATGACTGGCACAAAATTAGAGAGAAACTATGTATCTGCCATTTTCAAGAATCATGACTCATTTTTGGACTAATAGAATCCTCTTTCTAGAC</gDNA_template>
            <first_frame> I  Y  *  F  Q  T  K  R  R  N  R  E  E  N  R  E  T  Q  K  W  D  G  S  E  S  K  S  I  R  *  S  Q  F  S  T  D  N  S  *  L  K  Q  S  V  L  :  G  *  L  L  R  Q  H  L  *  Y  G  K  H  *  C  V  *  L  A  A  S  H  L  W  W  L  C  S  L  E  V  W  N  Q  A  L  K  G :   V  T  F  F  S  C  I  *  A  R  T  L  F  V  R  E  K  L  L  C  L  M  L  M :   D  V  K  F  Q  L  F  I  E  *  *  R :   F  T  S  A  K  T  L  E  K  L  T  S  L  Q  K  :  E  T  T  T  L  V  M  T  D  F  Y  M  L  K  V  N  S  G  C  N  V  I  T  S  W  G  E  L  L   : G  S  C  L  M  L  V  G  *  R  *  S  *  P  K  N  Q  L  S  S :   I  Y  *  *  V  H  W  D  C  W  S  S  H  Q  K  I  S  G  Q  W  L  P  S  V  *  L  A  Q  N  *  R  E  T  M  Y  L  P  F  S  R  I  M  T  H  F  W  T  N  R  I  L  F  L  D </first_frame>
            <second_frame>  F  I  D  F  R  P  K  G  E  T  E  K  K  T  E  R  R  K  N  G  M  D  R  R  A  N  R  F  D  K  V  N  S  V  Q  T  T  R  N  S  S  N  Q  S  W :   D  D  C  Y  V  S  T  Y  N  M  E  S  I  D  V  C  N  W  Q  R  V  T  C  G  G  C  A  L  W  K  Y  G  T  R  L  *  K   : G  *  H  S  F  L  A  Y  E  Q  G  P  Y  S  C  G  R  N  C  C  V  *  C  *   : W  T  *  N  S  N  C  S  *  S  N  K   : G  S  R  A  Q  R  H  W  R  S  *  R  P  Y  K  R :   R  Q  Q  L  W  *  *  Q  T  S  I  C  S  R  S  T  L  A  A  T  S  S  H  H  G  E  S  C  W  :  V  L  A  L  C  W  L  G  N  D  N  H  D  R  K  T  N  Y  Q   : V  Y  I  D  R  C  I  G  I  V  G  H  H  I  K  R  L  V  D  N  G  F  L  Q  Y  D  W  H  K  I  R  E  K  L  C  I  C  H  F  Q  E  S  *  L  I  F  G  L  I  E  S  S  F  *   </second_frame>
            <third_frame>   L  L  I  S  D  Q  K  E  K  Q  R  R  K  Q  R  D  A  K  M  G  W  I  G  E  Q  I  D  S  I  K  S  I  Q  Y  R  Q  L  V  T  Q  A  I  S  L   : G  M  I  V  T  S  A  L  I  I  W  K  A  L  M  C  V  T  G  S  E  S  P  V  V  V  V  L  S  G  S  M  E  P  G  F  K  R  :  G  D  I  L  F  L  H  M  S  K  D  P  I  R  A  G  E  I  V  V  F  N  V  D  :  G  R  E  I  P  I  V  H  R  V  I  K  :  V  H  E  R  K  D  T  G  E  V  N  V  L  T  K   : G  D  N  N  F  G  D  D  R  L  L  Y  A  Q  G  Q  L  W  L  Q  R  H  H  I  M  G  R  A  V  G :   F  L  P  Y  V  G  W  V  T  I  I  M  T  E  K  P  I  I  K  :  Y  I  L  I  G  A  L  G  L  L  V  I  T  S  K  D  *  W  T  M  A  S  F  S  M  T  G  T  K  L  E  R  N  Y  V  S  A  I  F  K  N  H  D  S  F  L  D  *  *  N  P  L  S  R  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7663" stop="7531"/>
                    <exon start="5650" stop="5538"/>
                    <exon start="4970" stop="4899"/>
                    <exon start="4512" stop="4477"/>
                    <exon start="3832" stop="3787"/>
                    <exon start="3452" stop="3365"/>
                    <exon start="2684" stop="2627"/>
                    <exon start="2509" stop="2459"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>594</number_coding_nucleotides>
                  <number_encoded_amino_acids>198</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLISDQKEKQRRKQRDAKMGWIGEQIDSIKSIQYRQLVTQAISLGMIVTSALIIWKALMCVTGSESPVVVVLSGSMEPGFKRGDILFLHMSKDPIRAGEIVVFNVDGREIPIVHRVIKVHERKDTGEVNVLTKGDNNFGDDRLLYAQGQLWLQRHHIMGRAVGFLPYVGWVTIIMTEKPIIKYILIGALGLLVITSKD*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="12766" PGL_stop="9255"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12766" e_stop="12675"/>
            <exon e_start="12516" e_stop="12328"/>
            <exon e_start="12229" e_stop="12116"/>
            <exon e_start="12019" e_stop="11900"/>
            <exon e_start="11818" e_stop="11696"/>
            <exon e_start="11599" e_stop="11501"/>
            <exon e_start="11375" e_stop="11319"/>
            <exon e_start="11225" e_stop="11179"/>
            <exon e_start="11094" e_stop="10951"/>
            <exon e_start="10869" e_stop="10692"/>
            <exon e_start="10242" e_stop="10078"/>
            <exon e_start="9524" e_stop="9255"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.952" acc_prob="0.913" e_score="0.957"/>
          <exon-intron don_prob="0.760" acc_prob="0.996" e_score="0.995"/>
          <exon-intron don_prob="0.937" acc_prob="0.392" e_score="0.991"/>
          <exon-intron don_prob="0.986" acc_prob="0.569" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.889" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.962" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.997" e_score="0.994"/>
          <exon-intron don_prob="0.968" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.957">
            <gDNA_exon_boundary e_start="12766" e_stop="12675" e_length="92"/>
          </exon>
          <intron i_serial="1" don_prob="0.952" acc_prob="0.913">
            <gDNA_intron_boundary i_start="12674" i_stop="12517" i_length="158"/>
          </intron>
          <exon e_serial="2" e_score="0.995">
            <gDNA_exon_boundary e_start="12516" e_stop="12328" e_length="189"/>
          </exon>
          <intron i_serial="2" don_prob="0.760" acc_prob="0.996">
            <gDNA_intron_boundary i_start="12327" i_stop="12230" i_length="98"/>
          </intron>
          <exon e_serial="3" e_score="0.991">
            <gDNA_exon_boundary e_start="12229" e_stop="12116" e_length="114"/>
          </exon>
          <intron i_serial="3" don_prob="0.937" acc_prob="0.392">
            <gDNA_intron_boundary i_start="12115" i_stop="12020" i_length="96"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="12019" e_stop="11900" e_length="120"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.569">
            <gDNA_intron_boundary i_start="11899" i_stop="11819" i_length="81"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="11818" e_stop="11696" e_length="123"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.889">
            <gDNA_intron_boundary i_start="11695" i_stop="11600" i_length="96"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="11599" e_stop="11501" e_length="99"/>
          </exon>
          <intron i_serial="6" don_prob="0.992" acc_prob="0.967">
            <gDNA_intron_boundary i_start="11500" i_stop="11376" i_length="125"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="11375" e_stop="11319" e_length="57"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="11318" i_stop="11226" i_length="93"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="11225" e_stop="11179" e_length="47"/>
          </exon>
          <intron i_serial="8" don_prob="0.962" acc_prob="0.972">
            <gDNA_intron_boundary i_start="11178" i_stop="11095" i_length="84"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="11094" e_stop="10951" e_length="144"/>
          </exon>
          <intron i_serial="9" don_prob="0.977" acc_prob="0.936">
            <gDNA_intron_boundary i_start="10950" i_stop="10870" i_length="81"/>
          </intron>
          <exon e_serial="10" e_score="0.994">
            <gDNA_exon_boundary e_start="10869" e_stop="10692" e_length="178"/>
          </exon>
          <intron i_serial="10" don_prob="0.977" acc_prob="0.997">
            <gDNA_intron_boundary i_start="10691" i_stop="10243" i_length="449"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="10242" e_stop="10078" e_length="165"/>
          </exon>
          <intron i_serial="11" don_prob="0.968" acc_prob="0.990">
            <gDNA_intron_boundary i_start="10077" i_stop="9525" i_length="553"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="9524" e_stop="9255" e_length="270"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12766" stop="12675"/>
              <exon start="12516" stop="12328"/>
              <exon start="12229" stop="12116"/>
              <exon start="12019" stop="11900"/>
              <exon start="11818" stop="11696"/>
              <exon start="11599" stop="11501"/>
              <exon start="11375" stop="11319"/>
              <exon start="11225" stop="11179"/>
              <exon start="11094" stop="10951"/>
              <exon start="10869" stop="10692"/>
              <exon start="10242" stop="10078"/>
              <exon start="9524" stop="9255"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314335" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCACGCCTCTCATTTTGCAACTAAGGGAAGAGTTATATGATCGACCATACGATGAAATTAACTGGAAGAAAGTGCGCCATGTATGTGCAAAG : GAGGATCTTTATTACCCTCATCCGTTGGTTCAAGATTTGATGTGGGATAGTCTCTACATATGTACCGAGCCTTTGTTGACCCGTTGGCCTTTCAACAAGCTGAGAAACAAAGCTCTTGAAGTTACCATGAAACACATACACTATGAAGACGAGAATAGTCGATACATCACCATCGGATGTGTCGAAAAA : GTATTGTGCATGCTTGCTTGTTGGGTCGAGGATCCTAACGGCGATTATTTCAAAAAACATCTTGCTAGGATCTCTGATTATTTATGGGTAGCTGAAGATGGAATGAAAATGCAG : AGTTTCGGTAGTCAAGAATGGGATACTGGTTTTGCTATCCAAGCACTATTGGCCAGTGAGATGAATGATGAGATAGCAGATACGCTTAGAAAAGGACATGACTTTATAAAACAATCTCAG : GTGACGAACAATCCGTCTGGTGATTTCAAAGGAATGTATCGACATATCTCAAAAGGATCATGGACTTTTTCAGATCAAGATCATGGATGGCAAGTCTCTGATTGCACTGCTGAAGCATTAAAG : TGCTGCCTTCTGTTGTCTACAATGCCTCGTGAATTAGTCGGTCAGGCAATGGAGCCAGGGCGATTGTATGACTCGGTGAATGTTATTCTTTCATTACAG : AGCAAAAATGGCGGTTTAGCAGCATGGGAACCTGCAGGAGCCTCCGAGTATTTGGAG : CTGCTGAATCCTACTGAATTTTTCGCGGACATTGTCATTGAGCACGA : GTACGTCGAATGCACTGCCTCATCAATTCAAGCACTTGTTCTGTTTAAGAAGCTGTATCCCGGACACAGAACCAAGGAGATTAACATATTCATTGATAATGCTGTTAAATATCTTGAAGATGTACAAATGCCTGATGGTTCATG : GTATGGTAACTGGGGTGTTTGCTTCACATATGGTTCCTGGTTTGCTCTTGGAGGGCTTGTTGCAGCAGGCAAGTCCTACAACAACTCTGCAGCTGTTCGTAAAGGCGTTGAATTTCTGCTAAGAACACAAAGATCCGATGGTGGTTGGGGCGAAAGCTACCGTTCTTGCCCAGACAAG : GTATATAGAGAACTCGAAACAAATGACTCAAATCTTGTACAAACTGCATGGGCATTGATGGGATTGATTCACTCTGGACAGGCTGATAGAGATCCGAAACCCCTTCACCGTGCAGCAAAGTTGTTGATCAATTCTCAGATGGAAGATGGTGACTTCCCACAGCAG : GAAATTACTGGAGTTTTTATGAAGAATTGCATGTTGCATTATGCAGCATACAGAAATATATATCCATTATGGGGTTTGGCTGAATACCGCAAAAATGTATTATTACCATTAGAAAACAACTAAATATATATAATTTTTCGATATAGAGTGCAATTTGGTCCTTTTTTTTTTTGGTGTTAATGTGAGTGATGTAACAAAAGTAAAAATTCATAGCCTAAGTTAATTTTATTATTTTGTATTACATAATTTGTGAATAAAGAAAGTTACATA</gDNA_template>
            <first_frame> S  R  L  S  F  C  N  *  G  K  S  Y  M  I  D  H  T  M  K  L  T  G  R  K  C  A  M  Y  V  Q  R :   R  I  F  I  T  L  I  R  W  F  K  I  *  C  G  I  V  S  T  Y  V  P  S  L  C  *  P  V  G  L  S  T  S  *  E  T  K  L  L  K  L  P  *  N  T  Y  T  M  K  T  R  I  V  D  T  S  P  S  D  V  S  K  K :   Y  C  A  C  L  L  V  G  S  R  I  L  T  A  I  I  S  K  N  I  L  L  G  S  L  I  I  Y  G  *  L  K  M  E  *  K  C  R :   V  S  V  V  K  N  G  I  L  V  L  L  S  K  H  Y  W  P  V  R  *  M  M  R  *  Q  I  R  L  E  K  D  M  T  L  *  N  N  L  R :   *  R  T  I  R  L  V  I  S  K  E  C  I  D  I  S  Q  K  D  H  G  L  F  Q  I  K  I  M  D  G  K  S  L  I  A  L  L  K  H  *  S :   A  A  F  C  C  L  Q  C  L  V  N  *  S  V  R  Q  W  S  Q  G  D  C  M  T  R  *  M  L  F  F  H  Y  R :   A  K  M  A  V  *  Q  H  G  N  L  Q  E  P  P  S  I  W  S :   C  *  I  L  L  N  F  S  R  T  L  S  L  S  T   : S  T  S  N  A  L  P  H  Q  F  K  H  L  F  C  L  R  S  C  I  P  D  T  E  P  R  R  L  T  Y  S  L  I  M  L  L  N  I  L  K  M  Y  K  C  L  M  V  H   : G  M  V  T  G  V  F  A  S  H  M  V  P  G  L  L  L  E  G  L  L  Q  Q  A  S  P  T  T  T  L  Q  L  F  V  K  A  L  N  F  C  *  E  H  K  D  P  M  V  V  G  A  K  A  T  V  L  A  Q  T  R :   Y  I  E  N  S  K  Q  M  T  Q  I  L  Y  K  L  H  G  H  *  W  D  *  F  T  L  D  R  L  I  E  I  R  N  P  F  T  V  Q  Q  S  C  *  S  I  L  R  W  K  M  V  T  S  H  S  R :   K  L  L  E  F  L  *  R  I  A  C  C  I  M  Q  H  T  E  I  Y  I  H  Y  G  V  W  L  N  T  A  K  M  Y  Y  Y  H  *  K  T  T  K  Y  I  *  F  F  D  I  E  C  N  L  V  L  F  F  F  G  V  N  V  S  D  V  T  K  V  K  I  H  S  L  S  *  F  Y  Y  F  V  L  H  N  L  *  I  K  K  V  T   </first_frame>
            <second_frame>  H  A  S  H  F  A  T  K  G  R  V  I  *  S  T  I  R  *  N  *  L  E  E  S  A  P  C  M  C  K   : G  G  S  L  L  P  S  S  V  G  S  R  F  D  V  G  *  S  L  H  M  Y  R  A  F  V  D  P  L  A  F  Q  Q  A  E  K  Q  S  S  *  S  Y  H  E  T  H  T  L  *  R  R  E  *  S  I  H  H  H  R  M  C  R  K   : S  I  V  H  A  C  L  L  G  R  G  S  *  R  R  L  F  Q  K  T  S  C  *  D  L  *  L  F  M  G  S  *  R  W  N  E  N  A   : E  F  R  *  S  R  M  G  Y  W  F  C  Y  P  S  T  I  G  Q  *  D  E  *  *  D  S  R  Y  A  *  K  R  T  *  L  Y  K  T  I  S   : G  D  E  Q  S  V  W  *  F  Q  R  N  V  S  T  Y  L  K  R  I  M  D  F  F  R  S  R  S  W  M  A  S  L  *  L  H  C  *  S  I  K   : V  L  P  S  V  V  Y  N  A  S  *  I  S  R  S  G  N  G  A  R  A  I  V  *  L  G  E  C  Y  S  F  I  T   : E  Q  K  W  R  F  S  S  M  G  T  C  R  S  L  R  V  F  G   : A  A  E  S  Y  *  I  F  R  G  H  C  H  *  A  R  :  V  R  R  M  H  C  L  I  N  S  S  T  C  S  V  *  E  A  V  S  R  T  Q  N  Q  G  D  *  H  I  H  *  *  C  C  *  I  S  *  R  C  T  N  A  *  W  F  M  :  V  W  *  L  G  C  L  L  H  I  W  F  L  V  C  S  W  R  A  C  C  S  R  Q  V  L  Q  Q  L  C  S  C  S  *  R  R  *  I  S  A  K  N  T  K  I  R  W  W  L  G  R  K  L  P  F  L  P  R  Q   : G  I  *  R  T  R  N  K  *  L  K  S  C  T  N  C  M  G  I  D  G  I  D  S  L  W  T  G  *  *  R  S  E  T  P  S  P  C  S  K  V  V  D  Q  F  S  D  G  R  W  *  L  P  T  A   : G  N  Y  W  S  F  Y  E  E  L  H  V  A  L  C  S  I  Q  K  Y  I  S  I  M  G  F  G  *  I  P  Q  K  C  I  I  T  I  R  K  Q  L  N  I  Y  N  F  S  I  *  S  A  I  W  S  F  F  F  L  V  L  M  *  V  M  *  Q  K  *  K  F  I  A  *  V  N  F  I  I  L  Y  Y  I  I  C  E  *  R  K  L  H  </second_frame>
            <third_frame>   T  P  L  I  L  Q  L  R  E  E  L  Y  D  R  P  Y  D  E  I  N  W  K  K  V  R  H  V  C  A  K  :  E  D  L  Y  Y  P  H  P  L  V  Q  D  L  M  W  D  S  L  Y  I  C  T  E  P  L  L  T  R  W  P  F  N  K  L  R  N  K  A  L  E  V  T  M  K  H  I  H  Y  E  D  E  N  S  R  Y  I  T  I  G  C  V  E  K  :  V  L  C  M  L  A  C  W  V  E  D  P  N  G  D  Y  F  K  K  H  L  A  R  I  S  D  Y  L  W  V  A  E  D  G  M  K  M  Q  :  S  F  G  S  Q  E  W  D  T  G  F  A  I  Q  A  L  L  A  S  E  M  N  D  E  I  A  D  T  L  R  K  G  H  D  F  I  K  Q  S  Q  :  V  T  N  N  P  S  G  D  F  K  G  M  Y  R  H  I  S  K  G  S  W  T  F  S  D  Q  D  H  G  W  Q  V  S  D  C  T  A  E  A  L  K  :  C  C  L  L  L  S  T  M  P  R  E  L  V  G  Q  A  M  E  P  G  R  L  Y  D  S  V  N  V  I  L  S  L  Q  :  S  K  N  G  G  L  A  A  W  E  P  A  G  A  S  E  Y  L  E  :  L  L  N  P  T  E  F  F  A  D  I  V  I  E  H  E :   Y  V  E  C  T  A  S  S  I  Q  A  L  V  L  F  K  K  L  Y  P  G  H  R  T  K  E  I  N  I  F  I  D  N  A  V  K  Y  L  E  D  V  Q  M  P  D  G  S  W :   Y  G  N  W  G  V  C  F  T  Y  G  S  W  F  A  L  G  G  L  V  A  A  G  K  S  Y  N  N  S  A  A  V  R  K  G  V  E  F  L  L  R  T  Q  R  S  D  G  G  W  G  E  S  Y  R  S  C  P  D  K  :  V  Y  R  E  L  E  T  N  D  S  N  L  V  Q  T  A  W  A  L  M  G  L  I  H  S  G  Q  A  D  R  D  P  K  P  L  H  R  A  A  K  L  L  I  N  S  Q  M  E  D  G  D  F  P  Q  Q  :  E  I  T  G  V  F  M  K  N  C  M  L  H  Y  A  A  Y  R  N  I  Y  P  L  W  G  L  A  E  Y  R  K  N  V  L  L  P  L  E  N  N  *  I  Y  I  I  F  R  Y  R  V  Q  F  G  P  F  F  F  W  C  *  C  E  *  C  N  K  S  K  N  S  *  P  K  L  I  L  L  F  C  I  T  *  F  V  N  K  E  S  Y  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12764" stop="12675"/>
                    <exon start="12516" stop="12328"/>
                    <exon start="12229" stop="12116"/>
                    <exon start="12019" stop="11900"/>
                    <exon start="11818" stop="11696"/>
                    <exon start="11599" stop="11501"/>
                    <exon start="11375" stop="11319"/>
                    <exon start="11225" stop="11179"/>
                    <exon start="11094" stop="10951"/>
                    <exon start="10869" stop="10692"/>
                    <exon start="10242" stop="10078"/>
                    <exon start="9524" stop="9402"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1446</number_coding_nucleotides>
                  <number_encoded_amino_acids>482</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TPLILQLREELYDRPYDEINWKKVRHVCAKEDLYYPHPLVQDLMWDSLYICTEPLLTRWPFNKLRNKALEVTMKHIHYEDENSRYITIGCVEKVLCMLACWVEDPNGDYFKKHLARISDYLWVAEDGMKMQSFGSQEWDTGFAIQALLASEMNDEIADTLRKGHDFIKQSQVTNNPSGDFKGMYRHISKGSWTFSDQDHGWQVSDCTAEALKCCLLLSTMPRELVGQAMEPGRLYDSVNVILSLQSKNGGLAAWEPAGASEYLELLNPTEFFADIVIEHEYVECTASSIQALVLFKKLYPGHRTKEINIFIDNAVKYLEDVQMPDGSWYGNWGVCFTYGSWFALGGLVAAGKSYNNSAAVRKGVEFLLRTQRSDGGWGESYRSCPDKVYRELETNDSNLVQTAWALMGLIHSGQADRDPKPLHRAAKLLINSQMEDGDFPQQEITGVFMKNCMLHYAAYRNIYPLWGLAEYRKNVLLPLENN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="17798" PGL_stop="14546"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17798" e_stop="17152"/>
            <exon e_start="14614" e_stop="14546"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.990" acc_prob="0.998" e_score="0.923"/>
          <exon-only e_score="0.826"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.923">
            <gDNA_exon_boundary e_start="17798" e_stop="17152" e_length="647"/>
          </exon>
          <intron i_serial="1" don_prob="0.990" acc_prob="0.998">
            <gDNA_intron_boundary i_start="17151" i_stop="14615" i_length="2537"/>
          </intron>
          <exon e_serial="2" e_score="0.826">
            <gDNA_exon_boundary e_start="14614" e_stop="14546" e_length="69"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17798" stop="17152"/>
              <exon start="14614" stop="14546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342203" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATAATTTTTTGACCTTGCTTATACCAAACTTTATAATCCTACTTTTAAATATATTTTTTTGTTATTGCTTTATACCCAAATTCCTCCAATTTAAATACTATAATGAGTCTTTAACATAAAAAAATAAAATAAAGTTCATCCGAATTTATTGTTCATTCCCTTTATACCTTACACACTTTCAGCATAAACTCCCTCTTATTATTTAAGTAAAATTTCACTCATTTTATTTCCTATCTCCAACAACTCTACATATAATTATCCTAGTAAGTATATATGCAATTTTCCCTTCTTCATTACTTTTTTTTTTTTTATCGAGTCTTCTGAAACGATTTCTCTATCGTGTAAAGACAGATAAAATACGTAAGGGCAACATATATTTCAAATTTCATATATTTTATTGTTGAGGTGGTAGACGTTAAGAGTTCATTCGAACATTCGATTAAAGGATGTGGAAATTGAAAATTGCTGAAGGGCAAAATGGTCCATATTTGTATAGTACAAATAACTATGTTGGAAGACAAACGTGGGAGTTCGATCCAAATGGTGGAACGATAGAAGAACGGGCTAAGATAGAAGAGGCTCGAAAACAATTTTGGAATAATCGTTATAAAGTCAAGCCTAGTAGTGATCTTCTTTGGCGGATACAG : TTTCTTGGAGAGAAAAATTTCAAACAAAAAATTCCAGCAGTAAAAGTTGAAGAAGGTGAAGAAATTAGC</gDNA_template>
            <first_frame> I  I  F  *  P  C  L  Y  Q  T  L  *  S  Y  F  *  I  Y  F  F  V  I  A  L  Y  P  N  S  S  N  L  N  T  I  M  S  L  *  H  K  K  I  K  *  S  S  S  E  F  I  V  H  S  L  Y  T  L  H  T  F  S  I  N  S  L  L  L  F  K  *  N  F  T  H  F  I  S  Y  L  Q  Q  L  Y  I  *  L  S  *  *  V  Y  M  Q  F  S  L  L  H  Y  F  F  F  F  Y  R  V  F  *  N  D  F  S  I  V  *  R  Q  I  K  Y  V  R  A  T  Y  I  S  N  F  I  Y  F  I  V  E  V  V  D  V  K  S  S  F  E  H  S  I  K  G  C  G  N  *  K  L  L  K  G  K  M  V  H  I  C  I  V  Q  I  T  M  L  E  D  K  R  G  S  S  I  Q  M  V  E  R  *  K  N  G  L  R  *  K  R  L  E  N  N  F  G  I  I  V  I  K  S  S  L  V  V  I  F  F  G  G  Y  S :   F  L  E  R  K  I  S  N  K  K  F  Q  Q  *  K  L  K  K  V  K  K  L   </first_frame>
            <second_frame>  *  F  F  D  L  A  Y  T  K  L  Y  N  P  T  F  K  Y  I  F  L  L  L  L  Y  T  Q  I  P  P  I  *  I  L  *  *  V  F  N  I  K  K  *  N  K  V  H  P  N  L  L  F  I  P  F  I  P  Y  T  L  S  A  *  T  P  S  Y  Y  L  S  K  I  S  L  I  L  F  P  I  S  N  N  S  T  Y  N  Y  P  S  K  Y  I  C  N  F  P  F  F  I  T  F  F  F  F  I  E  S  S  E  T  I  S  L  S  C  K  D  R  *  N  T  *  G  Q  H  I  F  Q  I  S  Y  I  L  L  L  R  W  *  T  L  R  V  H  S  N  I  R  L  K  D  V  E  I  E  N  C  *  R  A  K  W  S  I  F  V  *  Y  K  *  L  C  W  K  T  N  V  G  V  R  S  K  W  W  N  D  R  R  T  G  *  D  R  R  G  S  K  T  I  L  E  *  S  L  *  S  Q  A  *  *  *  S  S  L  A  D  T   : V  S  W  R  E  K  F  Q  T  K  N  S  S  S  K  S  *  R  R  *  R  N  *  </second_frame>
            <third_frame>   N  F  L  T  L  L  I  P  N  F  I  I  L  L  L  N  I  F  F  C  Y  C  F  I  P  K  F  L  Q  F  K  Y  Y  N  E  S  L  T  *  K  N  K  I  K  F  I  R  I  Y  C  S  F  P  L  Y  L  T  H  F  Q  H  K  L  P  L  I  I  *  V  K  F  H  S  F  Y  F  L  S  P  T  T  L  H  I  I  I  L  V  S  I  Y  A  I  F  P  S  S  L  L  F  F  F  L  S  S  L  L  K  R  F  L  Y  R  V  K  T  D  K  I  R  K  G  N  I  Y  F  K  F  H  I  F  Y  C  *  G  G  R  R  *  E  F  I  R  T  F  D  *  R  M  W  K  L  K  I  A  E  G  Q  N  G  P  Y  L  Y  S  T  N  N  Y  V  G  R  Q  T  W  E  F  D  P  N  G  G  T  I  E  E  R  A  K  I  E  E  A  R  K  Q  F  W  N  N  R  Y  K  V  K  P  S  S  D  L  L  W  R  I  Q  :  F  L  G  E  K  N  F  K  Q  K  I  P  A  V  K  V  E  E  G  E  E  I  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17355" stop="17152"/>
                    <exon start="14614" stop="14546"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RMWKLKIAEGQNGPYLYSTNNYVGRQTWEFDPNGGTIEERAKIEEARKQFWNNRYKVKPSSDLLWRIQFLGEKNFKQKIPAVKVEEGEEIS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17592" stop="17395"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKFHSFYFLSPTTLHIIILVSIYAIFPSSLLFFFLSSLLKRFLYRVKTDKIRKGNIYFKFHIFYC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="24003" PGL_stop="22264"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24003" e_stop="23958"/>
            <exon e_start="22926" e_stop="22671"/>
            <exon e_start="22425" e_stop="22264"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.974" e_score="0.978"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.957"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.978">
            <gDNA_exon_boundary e_start="24003" e_stop="23958" e_length="46"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.974">
            <gDNA_intron_boundary i_start="23957" i_stop="22927" i_length="1031"/>
          </intron>
          <exon e_serial="2" e_score="0.957">
            <gDNA_exon_boundary e_start="22926" e_stop="22671" e_length="256"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="22670" i_stop="22426" i_length="245"/>
          </intron>
          <exon e_serial="3" e_score="0.988">
            <gDNA_exon_boundary e_start="22425" e_stop="22264" e_length="162"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24003" stop="23958"/>
              <exon start="22926" stop="22671"/>
              <exon start="22425" stop="22264"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330521" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCTGTTAATTAATTCTCAGATGGAAGATGGTGACTTCCCACAACAG : GAGATAACTGGTGTTTTCTTGAGGAATTGCATGATGCACTATGCATTATATAGGAATATATTTCCATTGTGGGGTTTGGCTGAATACCGCAGGAATGTCTTAGTACCATTAAAACACAACTACATATAGAGAATGCAATTTGGGCCTTCCGCGGATTCCGTATATAGCGGGAGCTTAGTGAATCGAGTTGTCCGTTGTTTGTTTTTTGTGTTAATGTAAGTGATCACCCAAGTAGTGGTTAGATATGACTATGATC : GACCCTTAATCAAATGGTTCGGATTCGAGCCTCGAGGATGGAAAGAATCTTGATATGATATGCTTCCTCCTTTAGGGTTCTACATAGGGGATCTACATGAATCCAATGTATACATTACTCATGAATCTACTAAACATCTATTGATATTTGTTTGTAAGCTCA</gDNA_template>
            <first_frame> A  V  N  *  F  S  D  G  R  W  *  L  P  T  T   : G  D  N  W  C  F  L  E  E  L  H  D  A  L  C  I  I  *  E  Y  I  S  I  V  G  F  G  *  I  P  Q  E  C  L  S  T  I  K  T  Q  L  H  I  E  N  A  I  W  A  F  R  G  F  R  I  *  R  E  L  S  E  S  S  C  P  L  F  V  F  C  V  N  V  S  D  H  P  S  S  G  *  I  *  L  *  S :   T  L  N  Q  M  V  R  I  R  A  S  R  M  E  R  I  L  I  *  Y  A  S  S  F  R  V  L  H  R  G  S  T  *  I  Q  C  I  H  Y  S  *  I  Y  *  T  S  I  D  I  C  L  *  A   </first_frame>
            <second_frame>  L  L  I  N  S  Q  M  E  D  G  D  F  P  Q  Q  :  E  I  T  G  V  F  L  R  N  C  M  M  H  Y  A  L  Y  R  N  I  F  P  L  W  G  L  A  E  Y  R  R  N  V  L  V  P  L  K  H  N  Y  I  *  R  M  Q  F  G  P  S  A  D  S  V  Y  S  G  S  L  V  N  R  V  V  R  C  L  F  F  V  L  M  *  V  I  T  Q  V  V  V  R  Y  D  Y  D   : R  P  L  I  K  W  F  G  F  E  P  R  G  W  K  E  S  *  Y  D  M  L  P  P  L  G  F  Y  I  G  D  L  H  E  S  N  V  Y  I  T  H  E  S  T  K  H  L  L  I  F  V  C  K  L  </second_frame>
            <third_frame>   C  *  L  I  L  R  W  K  M  V  T  S  H  N  R :   R  *  L  V  F  S  *  G  I  A  *  C  T  M  H  Y  I  G  I  Y  F  H  C  G  V  W  L  N  T  A  G  M  S  *  Y  H  *  N  T  T  T  Y  R  E  C  N  L  G  L  P  R  I  P  Y  I  A  G  A  *  *  I  E  L  S  V  V  C  F  L  C  *  C  K  *  S  P  K  *  W  L  D  M  T  M  I  :  D  P  *  S  N  G  S  D  S  S  L  E  D  G  K  N  L  D  M  I  C  F  L  L  *  G  S  T  *  G  I  Y  M  N  P  M  Y  T  L  L  M  N  L  L  N  I  Y  *  Y  L  F  V  S  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0131G17.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="39778" PGL_stop="37395"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="39778" e_stop="39732"/>
            <exon e_start="39356" e_stop="39159"/>
            <exon e_start="38703" e_stop="38619"/>
            <exon e_start="38426" e_stop="38279"/>
            <exon e_start="38096" e_stop="37908"/>
            <exon e_start="37810" e_stop="37697"/>
            <exon e_start="37506" e_stop="37395"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.975" acc_prob="0.995" e_score="0.894"/>
          <exon-intron don_prob="0.989" acc_prob="0.834" e_score="0.975"/>
          <exon-intron don_prob="0.995" acc_prob="0.000" e_score="0.976"/>
          <exon-intron don_prob="0.738" acc_prob="0.980" e_score="0.993"/>
          <exon-intron don_prob="0.975" acc_prob="0.979" e_score="0.989"/>
          <exon-intron don_prob="0.971" acc_prob="0.947" e_score="0.991"/>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.894">
            <gDNA_exon_boundary e_start="39778" e_stop="39732" e_length="47"/>
          </exon>
          <intron i_serial="1" don_prob="0.975" acc_prob="0.995">
            <gDNA_intron_boundary i_start="39731" i_stop="39357" i_length="375"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="39356" e_stop="39159" e_length="198"/>
          </exon>
          <intron i_serial="2" don_prob="0.989" acc_prob="0.834">
            <gDNA_intron_boundary i_start="39158" i_stop="38704" i_length="455"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="38703" e_stop="38619" e_length="85"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.000">
            <gDNA_intron_boundary i_start="38618" i_stop="38427" i_length="192"/>
          </intron>
          <exon e_serial="4" e_score="0.993">
            <gDNA_exon_boundary e_start="38426" e_stop="38279" e_length="148"/>
          </exon>
          <intron i_serial="4" don_prob="0.738" acc_prob="0.980">
            <gDNA_intron_boundary i_start="38278" i_stop="38097" i_length="182"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="38096" e_stop="37908" e_length="189"/>
          </exon>
          <intron i_serial="5" don_prob="0.975" acc_prob="0.979">
            <gDNA_intron_boundary i_start="37907" i_stop="37811" i_length="97"/>
          </intron>
          <exon e_serial="6" e_score="0.991">
            <gDNA_exon_boundary e_start="37810" e_stop="37697" e_length="114"/>
          </exon>
          <intron i_serial="6" don_prob="0.971" acc_prob="0.947">
            <gDNA_intron_boundary i_start="37696" i_stop="37507" i_length="190"/>
          </intron>
          <exon e_serial="7" e_score="0.991">
            <gDNA_exon_boundary e_start="37506" e_stop="37395" e_length="112"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="39778" stop="39732"/>
              <exon start="39356" stop="39159"/>
              <exon start="38703" stop="38619"/>
              <exon start="38426" stop="38279"/>
              <exon start="38096" stop="37908"/>
              <exon start="37810" stop="37697"/>
              <exon start="37506" stop="37395"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338582" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGCTGAACATCGAAAGGAAATTCTTCGTTATATATACTGTCACCAG : AATGAAGATGGCGGATGGGGGTTGCATATAGAAGGTCACAGTACAATGTTTTGTACAGCTCTGAGTTATATTTGCATGAGGATCCTTGGAGAAGGACCAGACGGTGGCGAAAGAAATGCGTGTGCTAGAGCGAGGAAATGGATTCTTGATCATGGTAGCGTTACTGCGATTCCTTCTTCGGGGAAAATATGGCTCTCG : ATTCTTGGAGCTTTTGAGTGGTTAGGAACCAATCCAATTCCTCCCGAGTTTTATATTCTTCCTTCTTTTCTTCCAATGCATCCAG : TCGAATATTTTACATGCCACTGTCTTATCTCTATGGTAAGAGATTTGTTGGTCCAATCACACCTCTCATTTTGCAATTGAGGGAAGAGTTATATGATCAACCATACAATGAAATCAACTGGAAAAGAGTACGCCATCTATGTGCAAAG : GAGGATCTCTATTACCCTCATCCACTGGTTCAGGACTTGATGTGGGACACTCTCTACTTTTTTTACGAGCCTTTATTGACTCGTTGGCCTTTCAACAAGCTGAGAAATAAAGCTCTTGAGGTTACGATGAAACATCTTCATTATGAAGACGAGAATAGTCGATACATCACTGTTCAATGTGTCAATAAA : GTACTGTGTATGCTTGCTTGTTGGGTTGAGGATCCAAACGGCAGTTATTTCAAAAAACATCTTGCTCGGGTTCCAGATTATTTATGGGTAGCTGAAGATGGGATGAAAATGCAG : AATAGCGGTAGTCAATCATGGGATACTAGTTTTGCTATTCAAGCACTATTGGCCAGTGAGATGAACGATGAGATATCAGATACTCTTAGAAAAGGACACGACTTCATAAAAA</gDNA_template>
            <first_frame> Q  L  N  I  E  R  K  F  F  V  I  Y  T  V  T  R :   M  K  M  A  D  G  G  C  I  *  K  V  T  V  Q  C  F  V  Q  L  *  V  I  F  A  *  G  S  L  E  K  D  Q  T  V  A  K  E  M  R  V  L  E  R  G  N  G  F  L  I  M  V  A  L  L  R  F  L  L  R  G  K  Y  G  S  R :   F  L  E  L  L  S  G  *  E  P  I  Q  F  L  P  S  F  I  F  F  L  L  F  F  Q  C  I  Q  :  S  N  I  L  H  A  T  V  L  S  L  W  *  E  I  C  W  S  N  H  T  S  H  F  A  I  E  G  R  V  I  *  S  T  I  Q  *  N  Q  L  E  K  S  T  P  S  M  C  K   : G  G  S  L  L  P  S  S  T  G  S  G  L  D  V  G  H  S  L  L  F  L  R  A  F  I  D  S  L  A  F  Q  Q  A  E  K  *  S  S  *  G  Y  D  E  T  S  S  L  *  R  R  E  *  S  I  H  H  C  S  M  C  Q  *   : S  T  V  Y  A  C  L  L  G  *  G  S  K  R  Q  L  F  Q  K  T  S  C  S  G  S  R  L  F  M  G  S  *  R  W  D  E  N  A   : E  *  R  *  S  I  M  G  Y  *  F  C  Y  S  S  T  I  G  Q  *  D  E  R  *  D  I  R  Y  S  *  K  R  T  R  L  H  K   </first_frame>
            <second_frame>  S  *  T  S  K  G  N  S  S  L  Y  I  L  S  P   : E  *  R  W  R  M  G  V  A  Y  R  R  S  Q  Y  N  V  L  Y  S  S  E  L  Y  L  H  E  D  P  W  R  R  T  R  R  W  R  K  K  C  V  C  *  S  E  E  M  D  S  *  S  W  *  R  Y  C  D  S  F  F  G  E  N  M  A  L   : D  S  W  S  F  *  V  V  R  N  Q  S  N  S  S  R  V  L  Y  S  S  F  F  S  S  N  A  S  S :   R  I  F  Y  M  P  L  S  Y  L  Y  G  K  R  F  V  G  P  I  T  P  L  I  L  Q  L  R  E  E  L  Y  D  Q  P  Y  N  E  I  N  W  K  R  V  R  H  L  C  A  K  :  E  D  L  Y  Y  P  H  P  L  V  Q  D  L  M  W  D  T  L  Y  F  F  Y  E  P  L  L  T  R  W  P  F  N  K  L  R  N  K  A  L  E  V  T  M  K  H  L  H  Y  E  D  E  N  S  R  Y  I  T  V  Q  C  V  N  K  :  V  L  C  M  L  A  C  W  V  E  D  P  N  G  S  Y  F  K  K  H  L  A  R  V  P  D  Y  L  W  V  A  E  D  G  M  K  M  Q  :  N  S  G  S  Q  S  W  D  T  S  F  A  I  Q  A  L  L  A  S  E  M  N  D  E  I  S  D  T  L  R  K  G  H  D  F  I  K  </second_frame>
            <third_frame>   A  E  H  R  K  E  I  L  R  Y  I  Y  C  H  Q  :  N  E  D  G  G  W  G  L  H  I  E  G  H  S  T  M  F  C  T  A  L  S  Y  I  C  M  R  I  L  G  E  G  P  D  G  G  E  R  N  A  C  A  R  A  R  K  W  I  L  D  H  G  S  V  T  A  I  P  S  S  G  K  I  W  L  S  :  I  L  G  A  F  E  W  L  G  T  N  P  I  P  P  E  F  Y  I  L  P  S  F  L  P  M  H  P   : V  E  Y  F  T  C  H  C  L  I  S  M  V  R  D  L  L  V  Q  S  H  L  S  F  C  N  *  G  K  S  Y  M  I  N  H  T  M  K  S  T  G  K  E  Y  A  I  Y  V  Q  R :   R  I  S  I  T  L  I  H  W  F  R  T  *  C  G  T  L  S  T  F  F  T  S  L  Y  *  L  V  G  L  S  T  S  *  E  I  K  L  L  R  L  R  *  N  I  F  I  M  K  T  R  I  V  D  T  S  L  F  N  V  S  I  K :   Y  C  V  C  L  L  V  G  L  R  I  Q  T  A  V  I  S  K  N  I  L  L  G  F  Q  I  I  Y  G  *  L  K  M  G  *  K  C  R :   I  A  V  V  N  H  G  I  L  V  L  L  F  K  H  Y  W  P  V  R  *  T  M  R  Y  Q  I  L  L  E  K  D  T  T  S  *  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="38686" stop="38619"/>
                    <exon start="38426" stop="38279"/>
                    <exon start="38096" stop="37908"/>
                    <exon start="37810" stop="37697"/>
                    <exon start="37506" stop="37396"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>630</number_coding_nucleotides>
                  <number_encoded_amino_acids>210</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VVRNQSNSSRVLYSSFFSSNASSRIFYMPLSYLYGKRFVGPITPLILQLREELYDQPYNEINWKRVRHLCAKEDLYYPHPLVQDLMWDTLYFFYEPLLTRWPFNKLRNKALEVTMKHLHYEDENSRYITVQCVNKVLCMLACWVEDPNGSYFKKHLARVPDYLWVAEDGMKMQNSGSQSWDTSFAIQALLASEMNDEISDTLRKGHDFIK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="46462" PGL_stop="46043"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46462" e_stop="46043"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="46462" e_stop="46043" e_length="420"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46462" stop="46043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330527" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTACAACCACGCCAAATTGCAGGCTCTTAAGGCGAATGAAGCACAGAAGAAGGCTTCACAGGCTGCTGATGAGGAGGCTGGAAGATTGTTGGAGGAAAGAGAAGGGGAGAATGGTGCTAAGAAGAATGAGTCTCAGGGTTGAGTTGTTTCTTCGTTTACTTCGTATTATCCATAGGTAGAATGACATTGAGAGATGAAACCTGAAGATCAGATTATAACGTCCTTGTGCGGATGATTTAGCTTCTGTTTTTTTAGGTATAAATCATTTACATTATCTGTTTTGAGGATCTTATAATAGTTTTATTGCTCGTATTACCTTACCAGATCGTGCATGTACTTGAGCATGACTCGAGGCAATTTATGTTTATTTTGACAGAACAGTAATACTAGAAGAGCTTTTACTAATGAAAGTAACTGAT</gDNA_template>
            <first_frame> I  T  T  T  P  N  C  R  L  L  R  R  M  K  H  R  R  R  L  H  R  L  L  M  R  R  L  E  D  C  W  R  K  E  K  G  R  M  V  L  R  R  M  S  L  R  V  E  L  F  L  R  L  L  R  I  I  H  R  *  N  D  I  E  R  *  N  L  K  I  R  L  *  R  P  C  A  D  D  L  A  S  V  F  L  G  I  N  H  L  H  Y  L  F  *  G  S  Y  N  S  F  I  A  R  I  T  L  P  D  R  A  C  T  *  A  *  L  E  A  I  Y  V  Y  F  D  R  T  V  I  L  E  E  L  L  L  M  K  V  T  D </first_frame>
            <second_frame>  L  Q  P  R  Q  I  A  G  S  *  G  E  *  S  T  E  E  G  F  T  G  C  *  *  G  G  W  K  I  V  G  G  K  R  R  G  E  W  C  *  E  E  *  V  S  G  L  S  C  F  F  V  Y  F  V  L  S  I  G  R  M  T  L  R  D  E  T  *  R  S  D  Y  N  V  L  V  R  M  I  *  L  L  F  F  *  V  *  I  I  Y  I  I  C  F  E  D  L  I  I  V  L  L  L  V  L  P  Y  Q  I  V  H  V  L  E  H  D  S  R  Q  F  M  F  I  L  T  E  Q  *  Y  *  K  S  F  Y  *  *  K  *  L   </second_frame>
            <third_frame>   Y  N  H  A  K  L  Q  A  L  K  A  N  E  A  Q  K  K  A  S  Q  A  A  D  E  E  A  G  R  L  L  E  E  R  E  G  E  N  G  A  K  K  N  E  S  Q  G  *  V  V  S  S  F  T  S  Y  Y  P  *  V  E  *  H  *  E  M  K  P  E  D  Q  I  I  T  S  L  C  G  *  F  S  F  C  F  F  R  Y  K  S  F  T  L  S  V  L  R  I  L  *  *  F  Y  C  S  Y  Y  L  T  R  S  C  M  Y  L  S  M  T  R  G  N  L  C  L  F  *  Q  N  S  N  T  R  R  A  F  T  N  E  S  N  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0131G17.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="52432" PGL_stop="57142"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="52432" e_stop="53103"/>
            <exon e_start="54962" e_stop="55037"/>
            <exon e_start="55128" e_stop="55243"/>
            <exon e_start="56548" e_stop="57142"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.839" e_score="0.998"/>
          <exon-intron don_prob="0.853" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.889" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="52432" e_stop="53103" e_length="672"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.839">
            <gDNA_intron_boundary i_start="53104" i_stop="54961" i_length="1858"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="54962" e_stop="55037" e_length="76"/>
          </exon>
          <intron i_serial="2" don_prob="0.853" acc_prob="0.998">
            <gDNA_intron_boundary i_start="55038" i_stop="55127" i_length="90"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="55128" e_stop="55243" e_length="116"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.889">
            <gDNA_intron_boundary i_start="55244" i_stop="56547" i_length="1304"/>
          </intron>
          <exon e_serial="4" e_score="0.995">
            <gDNA_exon_boundary e_start="56548" e_stop="57142" e_length="595"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52432" stop="53032"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329487" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52985" stop="53103"/>
              <exon start="54962" stop="55037"/>
              <exon start="55128" stop="55243"/>
              <exon start="56548" stop="57142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343284" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAATGCCTTTTTACTACTTTCTATGAACAGTGACAAAATAATTTTTTCAAGTGAAAAGCAACAACAAAGGTCAAGAATGGTAGTACTACTACTAGTGTTCATGAACAATATAGAATCTTGAAATAGCAGATCAAGAAAATGGAACTTACCATAAAGAAAACTAAATGGATGGTTCCTTTAGCTATTGCACTTTTAATATCTTTTTTCTTAATCATTTTCACTCTTTCAACTAAAACCCCATTTCAGAAATCATCCATTAAAGCTAAAGTTCCAATCTTTGTTGAATCTAAACTACATATACCTTCTACTAGACCTATTTCAACAATACCCAAATTGGCATATTTGATTTCTGGTTCAAGTGGAGATGGGGAGAGCTTAAAGAGGACATTAAAGGCTTTGTACCATCCATTGAACCAGTATGTTGTACACTTAGACCTTGAAGCACCAGCTGATGAGAGGTTAGAGTTAGTGAACTTTGTAAAAAGGGAACCTTTATTTGTTGAAGTTGGGAATGTGAGAGTAGTTGTGAGATCTAATTTGGTTACTTATAGAGGACCTACTATGGTTAGTAATACACTTCATGCTGCTGCTATTTTGCTTAAGGAAGGTGGTGAGTGGGATTGGTTCATTAATCTTAGTGCTTCTGATTATCCTTTGGTGACACAAGATG : ATTTACTTCATACTTTTTCAACCGTGCCAAGAGAACTTAATTTTATTGAGCATACAAGTGACATTGGATGGAAGGA : ATATCACAGAGCCAGGCCTGTAATAATTGATTCAGGGCTGTACAGCCTGAATAAATCAGATCTCTTCTGGATCCCGCAGAAAAGGAGTATGCCAACAGCATTTAAACTATTCACAG : GCTCTGCTTGGACGATGCTCTCTCGCCCCTTTATGGAGTACCTTTTATGGGGGTGGGATAACCTTCCAAGAATAGTCTTAATGTACTATGCCAACTTCCTTTCAACGCCTGAAGGATATTTCCACACTGTCATATGTAATGCAGAAGAGTTCCTGAACACTACAGTGAATCACGACCTTCATTTCATATCCTGGGATAACCCTCCAAAGCAACATCCACATGTTCTAACTCTTAAGGATTACAAGAACATGGTTGACAGCAATGCATCATTCGCCAGAAAATTCCGCAGGAATGAACCAGTGCTTGACAAGATTGATTCTGAGCTCTTGGGGCGCAAAGTCGATGGTTTTGTTCCTGGTAGTTGGTTTGATGGCGGGGATTCCAACGCTACAATCTCACAGTACATTCTAAGAAACATAACTTCACTGAGACCTGGACCAGGTGCACAGAGAATGAAAAGTCTTATTTCTAGTTTGTTGTCTGATAAAGATTTTAGCTCAAAGCACTGCATCTAGTTCCTGACTGGTTGCAATTCGCGTGCTATAATGGAAATCTTTCGGTTGAATAACGGATCAATTCATCGTTGCTTATTCCC</gDNA_template>
            <first_frame> K  N  A  F  L  L  L  S  M  N  S  D  K  I  I  F  S  S  E  K  Q  Q  Q  R  S  R  M  V  V  L  L  L  V  F  M  N  N  I  E  S  *  N  S  R  S  R  K  W  N  L  P  *  R  K  L  N  G  W  F  L  *  L  L  H  F  *  Y  L  F  S  *  S  F  S  L  F  Q  L  K  P  H  F  R  N  H  P  L  K  L  K  F  Q  S  L  L  N  L  N  Y  I  Y  L  L  L  D  L  F  Q  Q  Y  P  N  W  H  I  *  F  L  V  Q  V  E  M  G  R  A  *  R  G  H  *  R  L  C  T  I  H  *  T  S  M  L  Y  T  *  T  L  K  H  Q  L  M  R  G  *  S  *  *  T  L  *  K  G  N  L  Y  L  L  K  L  G  M  *  E  *  L  *  D  L  I  W  L  L  I  E  D  L  L  W  L  V  I  H  F  M  L  L  L  F  C  L  R  K  V  V  S  G  I  G  S  L  I  L  V  L  L  I  I  L  W  *  H  K  M  :  I  Y  F  I  L  F  Q  P  C  Q  E  N  L  I  L  L  S  I  Q  V  T  L  D  G  R   : N  I  T  E  P  G  L  *  *  L  I  Q  G  C  T  A  *  I  N  Q  I  S  S  G  S  R  R  K  G  V  C  Q  Q  H  L  N  Y  S  Q  :  A  L  L  G  R  C  S  L  A  P  L  W  S  T  F  Y  G  G  G  I  T  F  Q  E  *  S  *  C  T  M  P  T  S  F  Q  R  L  K  D  I  S  T  L  S  Y  V  M  Q  K  S  S  *  T  L  Q  *  I  T  T  F  I  S  Y  P  G  I  T  L  Q  S  N  I  H  M  F  *  L  L  R  I  T  R  T  W  L  T  A  M  H  H  S  P  E  N  S  A  G  M  N  Q  C  L  T  R  L  I  L  S  S  W  G  A  K  S  M  V  L  F  L  V  V  G  L  M  A  G  I  P  T  L  Q  S  H  S  T  F  *  E  T  *  L  H  *  D  L  D  Q  V  H  R  E  *  K  V  L  F  L  V  C  C  L  I  K  I  L  A  Q  S  T  A  S  S  S  *  L  V  A  I  R  V  L  *  W  K  S  F  G  *  I  T  D  Q  F  I  V  A  Y  S  </first_frame>
            <second_frame>  K  M  P  F  Y  Y  F  L  *  T  V  T  K  *  F  F  Q  V  K  S  N  N  K  G  Q  E  W  *  Y  Y  Y  *  C  S  *  T  I  *  N  L  E  I  A  D  Q  E  N  G  T  Y  H  K  E  N  *  M  D  G  S  F  S  Y  C  T  F  N  I  F  F  L  N  H  F  H  S  F  N  *  N  P  I  S  E  I  I  H  *  S  *  S  S  N  L  C  *  I  *  T  T  Y  T  F  Y  *  T  Y  F  N  N  T  Q  I  G  I  F  D  F  W  F  K  W  R  W  G  E  L  K  E  D  I  K  G  F  V  P  S  I  E  P  V  C  C  T  L  R  P  *  S  T  S  *  *  E  V  R  V  S  E  L  C  K  K  G  T  F  I  C  *  S  W  E  C  E  S  S  C  E  I  *  F  G  Y  L  *  R  T  Y  Y  G  *  *  Y  T  S  C  C  C  Y  F  A  *  G  R  W  *  V  G  L  V  H  *  S  *  C  F  *  L  S  F  G  D  T  R  * :   F  T  S  Y  F  F  N  R  A  K  R  T  *  F  Y  *  A  Y  K  *  H  W  M  E  G  :  I  S  Q  S  Q  A  C  N  N  *  F  R  A  V  Q  P  E  *  I  R  S  L  L  D  P  A  E  K  E  Y  A  N  S  I  *  T  I  H  R :   L  C  L  D  D  A  L  S  P  L  Y  G  V  P  F  M  G  V  G  *  P  S  K  N  S  L  N  V  L  C  Q  L  P  F  N  A  *  R  I  F  P  H  C  H  M  *  C  R  R  V  P  E  H  Y  S  E  S  R  P  S  F  H  I  L  G  *  P  S  K  A  T  S  T  C  S  N  S  *  G  L  Q  E  H  G  *  Q  Q  C  I  I  R  Q  K  I  P  Q  E  *  T  S  A  *  Q  D  *  F  *  A  L  G  A  Q  S  R  W  F  C  S  W  *  L  V  *  W  R  G  F  Q  R  Y  N  L  T  V  H  S  K  K  H  N  F  T  E  T  W  T  R  C  T  E  N  E  K  S  Y  F  *  F  V  V  *  *  R  F  *  L  K  A  L  H  L  V  P  D  W  L  Q  F  A  C  Y  N  G  N  L  S  V  E  *  R  I  N  S  S  L  L  I  P </second_frame>
            <third_frame>   K  C  L  F  T  T  F  Y  E  Q  *  Q  N  N  F  F  K  *  K  A  T  T  K  V  K  N  G  S  T  T  T  S  V  H  E  Q  Y  R  I  L  K  *  Q  I  K  K  M  E  L  T  I  K  K  T  K  W  M  V  P  L  A  I  A  L  L  I  S  F  F  L  I  I  F  T  L  S  T  K  T  P  F  Q  K  S  S  I  K  A  K  V  P  I  F  V  E  S  K  L  H  I  P  S  T  R  P  I  S  T  I  P  K  L  A  Y  L  I  S  G  S  S  G  D  G  E  S  L  K  R  T  L  K  A  L  Y  H  P  L  N  Q  Y  V  V  H  L  D  L  E  A  P  A  D  E  R  L  E  L  V  N  F  V  K  R  E  P  L  F  V  E  V  G  N  V  R  V  V  V  R  S  N  L  V  T  Y  R  G  P  T  M  V  S  N  T  L  H  A  A  A  I  L  L  K  E  G  G  E  W  D  W  F  I  N  L  S  A  S  D  Y  P  L  V  T  Q  D   : D  L  L  H  T  F  S  T  V  P  R  E  L  N  F  I  E  H  T  S  D  I  G  W  K  E :   Y  H  R  A  R  P  V  I  I  D  S  G  L  Y  S  L  N  K  S  D  L  F  W  I  P  Q  K  R  S  M  P  T  A  F  K  L  F  T   : G  S  A  W  T  M  L  S  R  P  F  M  E  Y  L  L  W  G  W  D  N  L  P  R  I  V  L  M  Y  Y  A  N  F  L  S  T  P  E  G  Y  F  H  T  V  I  C  N  A  E  E  F  L  N  T  T  V  N  H  D  L  H  F  I  S  W  D  N  P  P  K  Q  H  P  H  V  L  T  L  K  D  Y  K  N  M  V  D  S  N  A  S  F  A  R  K  F  R  R  N  E  P  V  L  D  K  I  D  S  E  L  L  G  R  K  V  D  G  F  V  P  G  S  W  F  D  G  G  D  S  N  A  T  I  S  Q  Y  I  L  R  N  I  T  S  L  R  P  G  P  G  A  Q  R  M  K  S  L  I  S  S  L  L  S  D  K  D  F  S  S  K  H  C  I  *  F  L  T  G  C  N  S  R  A  I  M  E  I  F  R  L  N  N  G  S  I  H  R  C  L  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="52560" stop="53103"/>
                    <exon start="54962" stop="55037"/>
                    <exon start="55128" stop="55243"/>
                    <exon start="56548" stop="57062"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1248</number_coding_nucleotides>
                  <number_encoded_amino_acids>416</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QIKKMELTIKKTKWMVPLAIALLISFFLIIFTLSTKTPFQKSSIKAKVPIFVESKLHIPSTRPISTIPKLAYLISGSSGDGESLKRTLKALYHPLNQYVVHLDLEAPADERLELVNFVKREPLFVEVGNVRVVVRSNLVTYRGPTMVSNTLHAAAILLKEGGEWDWFINLSASDYPLVTQDDLLHTFSTVPRELNFIEHTSDIGWKEYHRARPVIIDSGLYSLNKSDLFWIPQKRSMPTAFKLFTGSAWTMLSRPFMEYLLWGWDNLPRIVLMYYANFLSTPEGYFHTVICNAEEFLNTTVNHDLHFISWDNPPKQHPHVLTLKDYKNMVDSNASFARKFRRNEPVLDKIDSELLGRKVDGFVPGSWFDGGDSNATISQYILRNITSLRPGPGAQRMKSLISSLLSDKDFSSKHCI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="58326" PGL_stop="70686"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58326" e_stop="58705"/>
            <exon e_start="59357" e_stop="59452"/>
            <exon e_start="61530" e_stop="61604"/>
            <exon e_start="64121" e_stop="64225"/>
            <exon e_start="64310" e_stop="64420"/>
            <exon e_start="64838" e_stop="64997"/>
            <exon e_start="66024" e_stop="66109"/>
            <exon e_start="66674" e_stop="66796"/>
            <exon e_start="66873" e_stop="67103"/>
            <exon e_start="69388" e_stop="69477"/>
            <exon e_start="70368" e_stop="70686"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.000" e_score="0.997"/>
          <exon-intron don_prob="0.979" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.900" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.984" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.975" acc_prob="0.950" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.960" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.916" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.972"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="58326" e_stop="58705" e_length="380"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.000">
            <gDNA_intron_boundary i_start="58706" i_stop="59356" i_length="651"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59357" e_stop="59452" e_length="96"/>
          </exon>
          <intron i_serial="2" don_prob="0.979" acc_prob="0.995">
            <gDNA_intron_boundary i_start="59453" i_stop="61529" i_length="2077"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="61530" e_stop="61604" e_length="75"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="61605" i_stop="64120" i_length="2516"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="64121" e_stop="64225" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="0.900" acc_prob="0.997">
            <gDNA_intron_boundary i_start="64226" i_stop="64309" i_length="84"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="64310" e_stop="64420" e_length="111"/>
          </exon>
          <intron i_serial="5" don_prob="0.984" acc_prob="0.998">
            <gDNA_intron_boundary i_start="64421" i_stop="64837" i_length="417"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="64838" e_stop="64997" e_length="160"/>
          </exon>
          <intron i_serial="6" don_prob="0.973" acc_prob="0.999">
            <gDNA_intron_boundary i_start="64998" i_stop="66023" i_length="1026"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="66024" e_stop="66109" e_length="86"/>
          </exon>
          <intron i_serial="7" don_prob="0.975" acc_prob="0.950">
            <gDNA_intron_boundary i_start="66110" i_stop="66673" i_length="564"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="66674" e_stop="66796" e_length="123"/>
          </exon>
          <intron i_serial="8" don_prob="0.987" acc_prob="0.960">
            <gDNA_intron_boundary i_start="66797" i_stop="66872" i_length="76"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="66873" e_stop="67103" e_length="231"/>
          </exon>
          <intron i_serial="9" don_prob="0.990" acc_prob="0.916">
            <gDNA_intron_boundary i_start="67104" i_stop="69387" i_length="2284"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="69388" e_stop="69477" e_length="90"/>
          </exon>
          <intron i_serial="10" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="69478" i_stop="70367" i_length="890"/>
          </intron>
          <exon e_serial="11" e_score="0.972">
            <gDNA_exon_boundary e_start="70368" e_stop="70686" e_length="319"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58326" stop="58705"/>
              <exon start="59357" stop="59452"/>
              <exon start="61530" stop="61604"/>
              <exon start="64121" stop="64225"/>
              <exon start="64310" stop="64420"/>
              <exon start="64838" stop="64997"/>
              <exon start="66024" stop="66109"/>
              <exon start="66674" stop="66796"/>
              <exon start="66873" stop="67103"/>
              <exon start="69388" stop="69477"/>
              <exon start="70368" stop="70686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342419" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGTACACCAATTTTCATCTTACTTTTTTTATTTTACAATACAAAAACCCTAAACTAGGGCTTTTCTTCCCGCCTTCTTCCTCACTCTCACTGTGTCAGTTCCGGTGAACGGAGCTGAAGAGTACACACAGATTCCGGTGAACAGAGCTGAAGAGTACACACAGATTCCGGTGAACGGAGCTGAAACCTACGCAGAGATTCCGGTGAGCGGAGATTAAAGCTGAGAGTAACAGAGAAACAATGGTCTCCCTGAAGATTTTACTATCTCTAATTGAATCTACTGTATTGAATCCCACACCTCCTACGCCATCGGAGAGGATCGAGCTGCTTCACGCCATTCGTCACTCTCTTCCATCTTTCCAGTCACTACTTTCCTATCCG : CCCCCCAAGCCCTCGGACCGAGTTCAAGTCCAGTCCAAAGAAGTGAGACTTCCAGATTCTGGCCCAATTTCACTGGATGATCAGGATGTTCAAATT : GCCCTAAAGTTAAGTGATGATCTACATCTTAATGAAGTAGACTCTGTTCGGTTGCTTGTTTCTGCCAATCAAGAG : TGGGGATTATTGGGACGTGAGCCATTAGAGATATTCCGCCTCGCAGCTGGACTGTGGTATACAGAGAGAAGAGATCTTATAACAGCACTTTACACACTGTTGAGG : GCTGTTGTCCTTGATCAAGGACTGGAACCTGATCTTGTGGCAGATATTCAGAGATTTTTGGACGATCTCATTAATGCTGGAGTTAGAAAGCGGTTAATCTCACTCATAAAG : GAACTCAATCGAGAAGAGCCATCTGGTTTGGGTGGGCCTAACTGTGAACGCTATATTCTTGATTCAAGAGGAGCTTTGGTGGAAAGGAGAGCTGTTGTTTCCAGGGAAAGGCTCATTCTGGCTCATTGCCTTGTCCTTTCTGTTTTGGTGGTGCGTGCAA : GCCCTAAAGATGTGAAGGACGTCTTTTCTACTCTAAAGGATAGTGCAGCAGGGCTTAGTGGTAGCACTGACACTTTAAGCCATCAG : ATAACATATAGTCTTCTATTCTCCCTTGTGGTGGCTCTCATATCAGATGCATTGAGTGCAGTACCTGATAAAACATCAGTCTTGTCCCGTGATGCAGCTTTTAGGCAGGAATTTCAGGAATCT : GTAATGGTCACTGGGAATGATCCTGTTGTTGAGGGCTATTTTGATTGCTTAAGGAGTGCATGGGTTGTACATCTTATGCTAATACATGACGGGATTGATGCAAAAGATACATCAGCAACTGCTTCATCAAATAATGATATAAGGAACATCTATTCATGCTTGGAAGTTATATTCTCCAACAATGTCTTCCTGTCTTGGCTGAATAAGATCCTCCTAACTCCTGCCTATCAG : AATGATGATGAGGATATGATCTACATGTACAATGCCTATTTGCACAAGATGATAACATGCCTTTTGTCTCATCCATTGGCCAAGGACAAG : GTTAAAGAAGCAAAAGAGAAGGCTATGACGGCACTTGGTCCGTACCGCTTGTCTACTTCACATGATCATACTGTGGAGGGAATTGGGCATTTTCAAAAGGCCACTGAACCTGCACCACAAACTTTTGTCTCTCTCTTGGAGTTTGTGAGTGAAATTTACCAGGTTAGTGCCTTTTCTTGCTAATTTTGGAGTCCCTAGGGCATTATCACTACGAAAAGGTATGAACGGTGATACCAAATTGATTTTGTATTTCAACACATAAAACTCTTGAATATGGAAAACAATTCAAAACTATCTTTCCATTAATAAAATACGAGTT</gDNA_template>
            <first_frame> R  T  P  I  F  I  L  L  F  L  F  Y  N  T  K  T  L  N  *  G  F  S  S  R  L  L  P  H  S  H  C  V  S  S  G  E  R  S  *  R  V  H  T  D  S  G  E  Q  S  *  R  V  H  T  D  S  G  E  R  S  *  N  L  R  R  D  S  G  E  R  R  L  K  L  R  V  T  E  K  Q  W  S  P  *  R  F  Y  Y  L  *  L  N  L  L  Y  *  I  P  H  L  L  R  H  R  R  G  S  S  C  F  T  P  F  V  T  L  F  H  L  S  S  H  Y  F  P  I  R :   P  P  S  P  R  T  E  F  K  S  S  P  K  K  *  D  F  Q  I  L  A  Q  F  H  W  M  I  R  M  F  K  L :   P  *  S  *  V  M  I  Y  I  L  M  K  *  T  L  F  G  C  L  F  L  P  I  K  S :   G  D  Y  W  D  V  S  H  *  R  Y  S  A  S  Q  L  D  C  G  I  Q  R  E  E  I  L  *  Q  H  F  T  H  C  *  G :   L  L  S  L  I  K  D  W  N  L  I  L  W  Q  I  F  R  D  F  W  T  I  S  L  M  L  E  L  E  S  G  *  S  H  S  *  R :   N  S  I  E  K  S  H  L  V  W  V  G  L  T  V  N  A  I  F  L  I  Q  E  E  L  W  W  K  G  E  L  L  F  P  G  K  G  S  F  W  L  I  A  L  S  F  L  F  W  W  C  V  Q  :  A  L  K  M  *  R  T  S  F  L  L  *  R  I  V  Q  Q  G  L  V  V  A  L  T  L  *  A  I  R :   *  H  I  V  F  Y  S  P  L  W  W  L  S  Y  Q  M  H  *  V  Q  Y  L  I  K  H  Q  S  C  P  V  M  Q  L  L  G  R  N  F  R  N  L :   *  W  S  L  G  M  I  L  L  L  R  A  I  L  I  A  *  G  V  H  G  L  Y  I  L  C  *  Y  M  T  G  L  M  Q  K  I  H  Q  Q  L  L  H  Q  I  M  I  *  G  T  S  I  H  A  W  K  L  Y  S  P  T  M  S  S  C  L  G  *  I  R  S  S  *  L  L  P  I  R :   M  M  M  R  I  *  S  T  C  T  M  P  I  C  T  R  *  *  H  A  F  C  L  I  H  W  P  R  T  R :   L  K  K  Q  K  R  R  L  *  R  H  L  V  R  T  A  C  L  L  H  M  I  I  L  W  R  E  L  G  I  F  K  R  P  L  N  L  H  H  K  L  L  S  L  S  W  S  L  *  V  K  F  T  R  L  V  P  F  L  A  N  F  G  V  P  R  A  L  S  L  R  K  G  M  N  G  D  T  K  L  I  L  Y  F  N  T  *  N  S  *  I  W  K  T  I  Q  N  Y  L  S  I  N  K  I  R  V </first_frame>
            <second_frame>  V  H  Q  F  S  S  Y  F  F  Y  F  T  I  Q  K  P  *  T  R  A  F  L  P  A  F  F  L  T  L  T  V  S  V  P  V  N  G  A  E  E  Y  T  Q  I  P  V  N  R  A  E  E  Y  T  Q  I  P  V  N  G  A  E  T  Y  A  E  I  P  V  S  G  D  *  S  *  E  *  Q  R  N  N  G  L  P  E  D  F  T  I  S  N  *  I  Y  C  I  E  S  H  T  S  Y  A  I  G  E  D  R  A  A  S  R  H  S  S  L  S  S  I  F  P  V  T  T  F  L  S   : A  P  Q  A  L  G  P  S  S  S  P  V  Q  R  S  E  T  S  R  F  W  P  N  F  T  G  *  S  G  C  S  N   : C  P  K  V  K  *  *  S  T  S  *  *  S  R  L  C  S  V  A  C  F  C  Q  S  R   : V  G  I  I  G  T  *  A  I  R  D  I  P  P  R  S  W  T  V  V  Y  R  E  K  R  S  Y  N  S  T  L  H  T  V  E   : G  C  C  P  *  S  R  T  G  T  *  S  C  G  R  Y  S  E  I  F  G  R  S  H  *  C  W  S  *  K  A  V  N  L  T  H  K   : G  T  Q  S  R  R  A  I  W  F  G  W  A  *  L  *  T  L  Y  S  *  F  K  R  S  F  G  G  K  E  S  C  C  F  Q  G  K  A  H  S  G  S  L  P  C  P  F  C  F  G  G  A  C  K :   P  *  R  C  E  G  R  L  F  Y  S  K  G  *  C  S  R  A  *  W  *  H  *  H  F  K  P  S   : D  N  I  *  S  S  I  L  P  C  G  G  S  H  I  R  C  I  E  C  S  T  *  *  N  I  S  L  V  P  *  C  S  F  *  A  G  I  S  G  I   : C  N  G  H  W  E  *  S  C  C  *  G  L  F  *  L  L  K  E  C  M  G  C  T  S  Y  A  N  T  *  R  D  *  C  K  R  Y  I  S  N  C  F  I  K  *  *  Y  K  E  H  L  F  M  L  G  S  Y  I  L  Q  Q  C  L  P  V  L  A  E  *  D  P  P  N  S  C  L  S   : E  *  *  *  G  Y  D  L  H  V  Q  C  L  F  A  Q  D  D  N  M  P  F  V  S  S  I  G  Q  G  Q   : G  *  R  S  K  R  E  G  Y  D  G  T  W  S  V  P  L  V  Y  F  T  *  S  Y  C  G  G  N  W  A  F  S  K  G  H  *  T  C  T  T  N  F  C  L  S  L  G  V  C  E  *  N  L  P  G  *  C  L  F  L  L  I  L  E  S  L  G  H  Y  H  Y  E  K  V  *  T  V  I  P  N  *  F  C  I  S  T  H  K  T  L  E  Y  G  K  Q  F  K  T  I  F  P  L  I  K  Y  E   </second_frame>
            <third_frame>   Y  T  N  F  H  L  T  F  F  I  L  Q  Y  K  N  P  K  L  G  L  F  F  P  P  S  S  S  L  S  L  C  Q  F  R  *  T  E  L  K  S  T  H  R  F  R  *  T  E  L  K  S  T  H  R  F  R  *  T  E  L  K  P  T  Q  R  F  R  *  A  E  I  K  A  E  S  N  R  E  T  M  V  S  L  K  I  L  L  S  L  I  E  S  T  V  L  N  P  T  P  P  T  P  S  E  R  I  E  L  L  H  A  I  R  H  S  L  P  S  F  Q  S  L  L  S  Y  P  :  P  P  K  P  S  D  R  V  Q  V  Q  S  K  E  V  R  L  P  D  S  G  P  I  S  L  D  D  Q  D  V  Q  I  :  A  L  K  L  S  D  D  L  H  L  N  E  V  D  S  V  R  L  L  V  S  A  N  Q  E  :  W  G  L  L  G  R  E  P  L  E  I  F  R  L  A  A  G  L  W  Y  T  E  R  R  D  L  I  T  A  L  Y  T  L  L  R  :  A  V  V  L  D  Q  G  L  E  P  D  L  V  A  D  I  Q  R  F  L  D  D  L  I  N  A  G  V  R  K  R  L  I  S  L  I  K  :  E  L  N  R  E  E  P  S  G  L  G  G  P  N  C  E  R  Y  I  L  D  S  R  G  A  L  V  E  R  R  A  V  V  S  R  E  R  L  I  L  A  H  C  L  V  L  S  V  L  V  V  R  A   : S  P  K  D  V  K  D  V  F  S  T  L  K  D  S  A  A  G  L  S  G  S  T  D  T  L  S  H  Q  :  I  T  Y  S  L  L  F  S  L  V  V  A  L  I  S  D  A  L  S  A  V  P  D  K  T  S  V  L  S  R  D  A  A  F  R  Q  E  F  Q  E  S  :  V  M  V  T  G  N  D  P  V  V  E  G  Y  F  D  C  L  R  S  A  W  V  V  H  L  M  L  I  H  D  G  I  D  A  K  D  T  S  A  T  A  S  S  N  N  D  I  R  N  I  Y  S  C  L  E  V  I  F  S  N  N  V  F  L  S  W  L  N  K  I  L  L  T  P  A  Y  Q  :  N  D  D  E  D  M  I  Y  M  Y  N  A  Y  L  H  K  M  I  T  C  L  L  S  H  P  L  A  K  D  K  :  V  K  E  A  K  E  K  A  M  T  A  L  G  P  Y  R  L  S  T  S  H  D  H  T  V  E  G  I  G  H  F  Q  K  A  T  E  P  A  P  Q  T  F  V  S  L  L  E  F  V  S  E  I  Y  Q  V  S  A  F  S  C  *  F  W  S  P  *  G  I  I  T  T  K  R  Y  E  R  *  Y  Q  I  D  F  V  F  Q  H  I  K  L  L  N  M  E  N  N  S  K  L  S  F  H  *  *  N  T  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58532" stop="58705"/>
                    <exon start="59357" stop="59452"/>
                    <exon start="61530" stop="61604"/>
                    <exon start="64121" stop="64225"/>
                    <exon start="64310" stop="64420"/>
                    <exon start="64838" stop="64997"/>
                    <exon start="66024" stop="66109"/>
                    <exon start="66674" stop="66796"/>
                    <exon start="66873" stop="67103"/>
                    <exon start="69388" stop="69477"/>
                    <exon start="70368" stop="70550"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1431</number_coding_nucleotides>
                  <number_encoded_amino_acids>477</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AEIKAESNRETMVSLKILLSLIESTVLNPTPPTPSERIELLHAIRHSLPSFQSLLSYPPPKPSDRVQVQSKEVRLPDSGPISLDDQDVQIALKLSDDLHLNEVDSVRLLVSANQEWGLLGREPLEIFRLAAGLWYTERRDLITALYTLLRAVVLDQGLEPDLVADIQRFLDDLINAGVRKRLISLIKELNREEPSGLGGPNCERYILDSRGALVERRAVVSRERLILAHCLVLSVLVVRASPKDVKDVFSTLKDSAAGLSGSTDTLSHQITYSLLFSLVVALISDALSAVPDKTSVLSRDAAFRQEFQESVMVTGNDPVVEGYFDCLRSAWVVHLMLIHDGIDAKDTSATASSNNDIRNIYSCLEVIFSNNVFLSWLNKILLTPAYQNDDEDMIYMYNAYLHKMITCLLSHPLAKDKVKEAKEKAMTALGPYRLSTSHDHTVEGIGHFQKATEPAPQTFVSLLEFVSEIYQVSAFSC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="79225" PGL_stop="83914"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79225" e_stop="79255"/>
            <exon e_start="80533" e_stop="80625"/>
            <exon e_start="80709" e_stop="80822"/>
            <exon e_start="80963" e_stop="81133"/>
            <exon e_start="81239" e_stop="81294"/>
            <exon e_start="81375" e_stop="81447"/>
            <exon e_start="81546" e_stop="81736"/>
            <exon e_start="81841" e_stop="81967"/>
            <exon e_start="82101" e_stop="82178"/>
            <exon e_start="83804" e_stop="83914"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.832" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.848" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.208" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.975" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.323" e_score="0.995"/>
          <exon-intron don_prob="0.539" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.924" acc_prob="0.977" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79225" e_stop="79255" e_length="31"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="79256" i_stop="80532" i_length="1277"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="80533" e_stop="80625" e_length="93"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="80626" i_stop="80708" i_length="83"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="80709" e_stop="80822" e_length="114"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.832">
            <gDNA_intron_boundary i_start="80823" i_stop="80962" i_length="140"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="80963" e_stop="81133" e_length="171"/>
          </exon>
          <intron i_serial="4" don_prob="0.952" acc_prob="0.848">
            <gDNA_intron_boundary i_start="81134" i_stop="81238" i_length="105"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="81239" e_stop="81294" e_length="56"/>
          </exon>
          <intron i_serial="5" don_prob="0.981" acc_prob="0.208">
            <gDNA_intron_boundary i_start="81295" i_stop="81374" i_length="80"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="81375" e_stop="81447" e_length="73"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.975">
            <gDNA_intron_boundary i_start="81448" i_stop="81545" i_length="98"/>
          </intron>
          <exon e_serial="7" e_score="0.995">
            <gDNA_exon_boundary e_start="81546" e_stop="81736" e_length="191"/>
          </exon>
          <intron i_serial="7" don_prob="0.996" acc_prob="0.323">
            <gDNA_intron_boundary i_start="81737" i_stop="81840" i_length="104"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="81841" e_stop="81967" e_length="127"/>
          </exon>
          <intron i_serial="8" don_prob="0.539" acc_prob="0.974">
            <gDNA_intron_boundary i_start="81968" i_stop="82100" i_length="133"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="82101" e_stop="82178" e_length="78"/>
          </exon>
          <intron i_serial="9" don_prob="0.924" acc_prob="0.977">
            <gDNA_intron_boundary i_start="82179" i_stop="83803" i_length="1625"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="83804" e_stop="83914" e_length="111"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79225" stop="79255"/>
              <exon start="80533" stop="80625"/>
              <exon start="80709" stop="80822"/>
              <exon start="80963" stop="81133"/>
              <exon start="81239" stop="81294"/>
              <exon start="81375" stop="81447"/>
              <exon start="81546" stop="81736"/>
              <exon start="81841" stop="81967"/>
              <exon start="82101" stop="82178"/>
              <exon start="83804" stop="83914"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328926" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAACGGCGCCAGAATGATTAGTAAATCTAAG : GTATTGGAGTTGCTTGAAGTTGTCCAGTTCAAATCTCCTGATACTGTGTTGAAATCTTCACAAGCAGTTTCAAGCGCGAAGTATGGGTTTCTG : GCTGAAGATATACTTACCAATCCTGCTACTTCTGAAAAAGGTGGTGTTTATTACTACTCAGAACGTGGAGACCGTTTAATTGATCTAGCTGCATTTCGTGACAAATTATGGGAG : AAATACAACTTGTTTAATCCCCAGCATAGCTCCTTCAGCACTGAAGTTGAGCTAAATGAAATCCGAGATACAGTCCAACAGCTGTTACGATGGGGTTGGAAATACAACAAAAATCATGAAGAACAAGCAGCTCAGCTTCATATGTTAACTGGCTGGTCTCAAATTGTTGAG : GTCTCTGCCTCTAGCAAAATTTCCTCTCTTCCCAACCGTTCTGAAATATTATTTCA : GTTGCTTGATGCCTCTCTTGGTGCTTCTGGTTCTCCCGACTGCTCATTGAAGATGGCACTGATACTGACACAG : GTTGGTGTCACATGCATCGCCAAACTACGTGATGAAAGATTTTTATGCCCTAGTGGTTTAAACTCTGATACTGTCACTTGTCTTGACATCATGATGACAAAACAATTATCTAATGGAGCGTGCCATTCTATTCTATTCAAGCTTATACTGGCGATTCTCAGAAACGAATCATCAGAAGCATTGAGGAGGCG : CCAATATGCCTTGCTCCTTAGCTATATCCAGTACTGTCAACATATGCTTGATCCTGATCTTCCTACCACAGTAATGCAGTTATTGACAATGGATGAACAGGAAAATGATGATCAGGATCTTGAAAAG : ATTGTCAAAGATCAGACCGAAATGGCATATGCAAATTTTTCAATAATAAGGAAGGAGGCTCAATCACTTCTAGATCTG : ATCATAAAAGATGCAATCCATGGCAGCGAATCTGGAAAAACCATCTCGCTCTATGTTTTGGATGCTTTAATTTGCATTGATCATGAAAAGTTTTTCTTGAGTCAACTGCAG</gDNA_template>
            <first_frame> E  R  R  Q  N  D  *  *  I  *   : G  I  G  V  A  *  S  C  P  V  Q  I  S  *  Y  C  V  E  I  F  T  S  S  F  K  R  E  V  W  V  S   : G  *  R  Y  T  Y  Q  S  C  Y  F  *  K  R  W  C  L  L  L  L  R  T  W  R  P  F  N  *  S  S  C  I  S  *  Q  I  M  G   : E  I  Q  L  V  *  S  P  A  *  L  L  Q  H  *  S  *  A  K  *  N  P  R  Y  S  P  T  A  V  T  M  G  L  E  I  Q  Q  K  S  *  R  T  S  S  S  A  S  Y  V  N  W  L  V  S  N  C  *   : G  L  C  L  *  Q  N  F  L  S  S  Q  P  F  *  N  I  I  S  :  V  A  *  C  L  S  W  C  F  W  F  S  R  L  L  I  E  D  G  T  D  T  D  T   : G  W  C  H  M  H  R  Q  T  T  *  *  K  I  F  M  P  *  W  F  K  L  *  Y  C  H  L  S  *  H  H  D  D  K  T  I  I  *  W  S  V  P  F  Y  S  I  Q  A  Y  T  G  D  S  Q  K  R  I  I  R  S  I  E  E  A  :  P  I  C  L  A  P  *  L  Y  P  V  L  S  T  Y  A  *  S  *  S  S  Y  H  S  N  A  V  I  D  N  G  *  T  G  K  *  *  S  G  S  *  K   : D  C  Q  R  S  D  R  N  G  I  C  K  F  F  N  N  K  E  G  G  S  I  T  S  R  S   : D  H  K  R  C  N  P  W  Q  R  I  W  K  N  H  L  A  L  C  F  G  C  F  N  L  H  *  S  *  K  V  F  L  E  S  T  A  </first_frame>
            <second_frame>  N  G  A  R  M  I  S  K  S  K  :  V  L  E  L  L  E  V  V  Q  F  K  S  P  D  T  V  L  K  S  S  Q  A  V  S  S  A  K  Y  G  F  L  :  A  E  D  I  L  T  N  P  A  T  S  E  K  G  G  V  Y  Y  Y  S  E  R  G  D  R  L  I  D  L  A  A  F  R  D  K  L  W  E  :  K  Y  N  L  F  N  P  Q  H  S  S  F  S  T  E  V  E  L  N  E  I  R  D  T  V  Q  Q  L  L  R  W  G  W  K  Y  N  K  N  H  E  E  Q  A  A  Q  L  H  M  L  T  G  W  S  Q  I  V  E  :  V  S  A  S  S  K  I  S  S  L  P  N  R  S  E  I  L  F  Q :   L  L  D  A  S  L  G  A  S  G  S  P  D  C  S  L  K  M  A  L  I  L  T  Q  :  V  G  V  T  C  I  A  K  L  R  D  E  R  F  L  C  P  S  G  L  N  S  D  T  V  T  C  L  D  I  M  M  T  K  Q  L  S  N  G  A  C  H  S  I  L  F  K  L  I  L  A  I  L  R  N  E  S  S  E  A  L  R  R  R :   Q  Y  A  L  L  L  S  Y  I  Q  Y  C  Q  H  M  L  D  P  D  L  P  T  T  V  M  Q  L  L  T  M  D  E  Q  E  N  D  D  Q  D  L  E  K  :  I  V  K  D  Q  T  E  M  A  Y  A  N  F  S  I  I  R  K  E  A  Q  S  L  L  D  L  :  I  I  K  D  A  I  H  G  S  E  S  G  K  T  I  S  L  Y  V  L  D  A  L  I  C  I  D  H  E  K  F  F  L  S  Q  L  Q </second_frame>
            <third_frame>   T  A  P  E  *  L  V  N  L  R :   Y  W  S  C  L  K  L  S  S  S  N  L  L  I  L  C  *  N  L  H  K  Q  F  Q  A  R  S  M  G  F  W :   L  K  I  Y  L  P  I  L  L  L  L  K  K  V  V  F  I  T  T  Q  N  V  E  T  V  *  L  I  *  L  H  F  V  T  N  Y  G  R :   N  T  T  C  L  I  P  S  I  A  P  S  A  L  K  L  S  *  M  K  S  E  I  Q  S  N  S  C  Y  D  G  V  G  N  T  T  K  I  M  K  N  K  Q  L  S  F  I  C  *  L  A  G  L  K  L  L  R :   S  L  P  L  A  K  F  P  L  F  P  T  V  L  K  Y  Y  F   : S  C  L  M  P  L  L  V  L  L  V  L  P  T  A  H  *  R  W  H  *  Y  *  H  R :   L  V  S  H  A  S  P  N  Y  V  M  K  D  F  Y  A  L  V  V  *  T  L  I  L  S  L  V  L  T  S  *  *  Q  N  N  Y  L  M  E  R  A  I  L  F  Y  S  S  L  Y  W  R  F  S  E  T  N  H  Q  K  H  *  G  G   : A  N  M  P  C  S  L  A  I  S  S  T  V  N  I  C  L  I  L  I  F  L  P  Q  *  C  S  Y  *  Q  W  M  N  R  K  M  M  I  R  I  L  K  R :   L  S  K  I  R  P  K  W  H  M  Q  I  F  Q  *  *  G  R  R  L  N  H  F  *  I  * :   S  *  K  M  Q  S  M  A  A  N  L  E  K  P  S  R  S  M  F  W  M  L  *  F  A  L  I  M  K  S  F  S  *  V  N  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79226" stop="79255"/>
                    <exon start="80533" stop="80625"/>
                    <exon start="80709" stop="80822"/>
                    <exon start="80963" stop="81133"/>
                    <exon start="81239" stop="81294"/>
                    <exon start="81375" stop="81447"/>
                    <exon start="81546" stop="81736"/>
                    <exon start="81841" stop="81967"/>
                    <exon start="82101" stop="82178"/>
                    <exon start="83804" stop="83914"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1044</number_coding_nucleotides>
                  <number_encoded_amino_acids>348</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGARMISKSKVLELLEVVQFKSPDTVLKSSQAVSSAKYGFLAEDILTNPATSEKGGVYYYSERGDRLIDLAAFRDKLWEKYNLFNPQHSSFSTEVELNEIRDTVQQLLRWGWKYNKNHEEQAAQLHMLTGWSQIVEVSASSKISSLPNRSEILFQLLDASLGASGSPDCSLKMALILTQVGVTCIAKLRDERFLCPSGLNSDTVTCLDIMMTKQLSNGACHSILFKLILAILRNESSEALRRRQYALLLSYIQYCQHMLDPDLPTTVMQLLTMDEQENDDQDLEKIVKDQTEMAYANFSIIRKEAQSLLDLIIKDAIHGSESGKTISLYVLDALICIDHEKFFLSQLQ</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="85213" PGL_stop="88826"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85213" e_stop="85369"/>
            <exon e_start="85443" e_stop="85580"/>
            <exon e_start="85953" e_stop="86096"/>
            <exon e_start="86264" e_stop="86386"/>
            <exon e_start="86506" e_stop="86601"/>
            <exon e_start="86752" e_stop="86889"/>
            <exon e_start="86969" e_stop="87069"/>
            <exon e_start="87689" e_stop="87808"/>
            <exon e_start="87887" e_stop="87986"/>
            <exon e_start="88430" e_stop="88826"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.755" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.988" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.912" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.678" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.939" acc_prob="0.783" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.995"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85213" e_stop="85369" e_length="157"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="85370" i_stop="85442" i_length="73"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="85443" e_stop="85580" e_length="138"/>
          </exon>
          <intron i_serial="2" don_prob="0.755" acc_prob="0.000">
            <gDNA_intron_boundary i_start="85581" i_stop="85952" i_length="372"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="85953" e_stop="86096" e_length="144"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.988">
            <gDNA_intron_boundary i_start="86097" i_stop="86263" i_length="167"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="86264" e_stop="86386" e_length="123"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.994">
            <gDNA_intron_boundary i_start="86387" i_stop="86505" i_length="119"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="86506" e_stop="86601" e_length="96"/>
          </exon>
          <intron i_serial="5" don_prob="0.992" acc_prob="0.997">
            <gDNA_intron_boundary i_start="86602" i_stop="86751" i_length="150"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="86752" e_stop="86889" e_length="138"/>
          </exon>
          <intron i_serial="6" don_prob="0.912" acc_prob="0.979">
            <gDNA_intron_boundary i_start="86890" i_stop="86968" i_length="79"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="86969" e_stop="87069" e_length="101"/>
          </exon>
          <intron i_serial="7" don_prob="0.678" acc_prob="0.999">
            <gDNA_intron_boundary i_start="87070" i_stop="87688" i_length="619"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="87689" e_stop="87808" e_length="120"/>
          </exon>
          <intron i_serial="8" don_prob="0.939" acc_prob="0.783">
            <gDNA_intron_boundary i_start="87809" i_stop="87886" i_length="78"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="87887" e_stop="87986" e_length="100"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="87987" i_stop="88429" i_length="443"/>
          </intron>
          <exon e_serial="10" e_score="0.995">
            <gDNA_exon_boundary e_start="88430" e_stop="88826" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85213" stop="85369"/>
              <exon start="85443" stop="85580"/>
              <exon start="85953" stop="86096"/>
              <exon start="86264" stop="86386"/>
              <exon start="86506" stop="86601"/>
              <exon start="86752" stop="86889"/>
              <exon start="86969" stop="87069"/>
              <exon start="87689" stop="87808"/>
              <exon start="87887" stop="87986"/>
              <exon start="88430" stop="88826"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320181" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTAGAGTCAATGCAGCGTGTCTGCACTCTTGAAGCGGAACTTGCTCTTCTTCTGAGAATTAGCCACAAGTATGGTAAATCTGGGGCCCAGGTGCTTTTTTCAATGGGTGCATATGAGCACATATCTGCCTGTAAGGCACTAAATATGCAATTGAAG : GGAAGCTACCGGCGCATGGATGGCAAATTTGGAAGAGAACTGTCAGTTGATGTTGATAAACAGCGAATGATAATAGCTCCAATCTTGAGATTGGTGTTTTCACTTACTTCATTGGTTGATGCATCTGAATTTTTTGAG : GTTAAAAACAAAGTTGTACGTGAAGTCATTGAATTTGTAAGAAGTCATCAATTACTTTTTGATCAAATCCTACGAGAAGATCTTTCTGATGCTGATGTCTTGACAATGGAACAAATAAATTTGGTTGTTGGCATACTTACGAAG : ATTTGGCCATATGAAGAGACCGATGAATATGGTTTTGTTCAAGGGCTTTTTGTGATGATGCGTTTTCTTTTCTCTCGTGAGCCAGACTCTTTTATTACAAACCAATCTATGGATTTTCTGGAG : GAACGTCGGAAGGCAGAAATGAATGCATCTCGTCTTTGCTTTAGCCTGAGTTCTTATCTCTGTTTTCTTGTTACGAAGAAGTCTTTAAGATTGCCG : GTCTCAGATGGTCGAATGGACTATCGCACTTCTGCTGGTCAGCAACAGCCAACATTGAATTTACTTGGTTTTCTTCTCAACTCGCTGACTACAGCATTGGAAAGAGCTACTGAGGACAGATATTTATTGCTTAGCAAG : ATTCAAGACATAAATGAACTTTCAAGACAGGAAGTGGATGAAATCATCAATATGTGTGTTCCCAAGGGTTGTATTTCGTCGTCCGAGAACATTCAGAAAAG : GAGATATGTCGCGATGTTGGAGATGTGCCAGATTGTTGGAGATAGGAATCAACTTATGACACTATTGCTTTTACTAGCGGAAAACGTGATGAATATTATCCTTGTTCATTTTCAGGACAG : TTCTTTTGAATGTGACAACAAACGCTACTCAAAAGATGACTTGAATTTGCTATGTGGAAAGTTAATTTCAGCTTTGGAGAGGCTTGAATTACTAAGCGAG : GATAAAACAGGTCATGACCTTAAAGTATTTCGAAGATTAGCTAGTTCTCTGAAAGAAATATCGATTCAGAAGTCACCTGTTTGACCGGCCATCTCCTTCTTTTGTTCTTTCATAAATTTTTAGCATAGGGGGGTATGAGGAATTTAGTTGTAATGTAATTGTATATTTATCTTTTACATAGTGCTTGTCCTATATTTTTTTAATCCTCCAATCTGTTGTACATATTGTATATCATACTTACAGCCTCTTTTGTGCTTTTTGTGGGGGAGTTCTGAATGTTACAGAAGACAGATTACACTAGAAGGCTATTAGTAGTTATACTCCTATAGGTCTTGCCCCTTATTTATAGGTTTCTGCACTTCAATTATCATATTATTTTGTGTATTTACTGTTCAGA</gDNA_template>
            <first_frame> V  R  V  N  A  A  C  L  H  S  *  S  G  T  C  S  S  S  E  N  *  P  Q  V  W  *  I  W  G  P  G  A  F  F  N  G  C  I  *  A  H  I  C  L  *  G  T  K  Y  A  I  E   : G  K  L  P  A  H  G  W  Q  I  W  K  R  T  V  S  *  C  *  *  T  A  N  D  N  S  S  N  L  E  I  G  V  F  T  Y  F  I  G  *  C  I  *  I  F  *   : G  *  K  Q  S  C  T  *  S  H  *  I  C  K  K  S  S  I  T  F  *  S  N  P  T  R  R  S  F  *  C  *  C  L  D  N  G  T  N  K  F  G  C  W  H  T  Y  E   : D  L  A  I  *  R  D  R  *  I  W  F  C  S  R  A  F  C  D  D  A  F  S  F  L  S  *  A  R  L  F  Y  Y  K  P  I  Y  G  F  S  G   : G  T  S  E  G  R  N  E  C  I  S  S  L  L  *  P  E  F  L  S  L  F  S  C  Y  E  E  V  F  K  I  A   : G  L  R  W  S  N  G  L  S  H  F  C  W  S  A  T  A  N  I  E  F  T  W  F  S  S  Q  L  A  D  Y  S  I  G  K  S  Y  *  G  Q  I  F  I  A  *  Q   : D  S  R  H  K  *  T  F  K  T  G  S  G  *  N  H  Q  Y  V  C  S  Q  G  L  Y  F  V  V  R  E  H  S  E  K  :  E  I  C  R  D  V  G  D  V  P  D  C  W  R  *  E  S  T  Y  D  T  I  A  F  T  S  G  K  R  D  E  Y  Y  P  C  S  F  S  G  Q  :  F  F  *  M  *  Q  Q  T  L  L  K  R  *  L  E  F  A  M  W  K  V  N  F  S  F  G  E  A  *  I  T  K  R   : G  *  N  R  S  *  P  *  S  I  S  K  I  S  *  F  S  E  R  N  I  D  S  E  V  T  C  L  T  G  H  L  L  L  L  F  F  H  K  F  L  A  *  G  G  M  R  N  L  V  V  M  *  L  Y  I  Y  L  L  H  S  A  C  P  I  F  F  *  S  S  N  L  L  Y  I  L  Y  I  I  L  T  A  S  F  V  L  F  V  G  E  F  *  M  L  Q  K  T  D  Y  T  R  R  L  L  V  V  I  L  L  *  V  L  P  L  I  Y  R  F  L  H  F  N  Y  H  I  I  L  C  I  Y  C  S   </first_frame>
            <second_frame>  L  E  S  M  Q  R  V  C  T  L  E  A  E  L  A  L  L  L  R  I  S  H  K  Y  G  K  S  G  A  Q  V  L  F  S  M  G  A  Y  E  H  I  S  A  C  K  A  L  N  M  Q  L  K  :  G  S  Y  R  R  M  D  G  K  F  G  R  E  L  S  V  D  V  D  K  Q  R  M  I  I  A  P  I  L  R  L  V  F  S  L  T  S  L  V  D  A  S  E  F  F  E  :  V  K  N  K  V  V  R  E  V  I  E  F  V  R  S  H  Q  L  L  F  D  Q  I  L  R  E  D  L  S  D  A  D  V  L  T  M  E  Q  I  N  L  V  V  G  I  L  T  K  :  I  W  P  Y  E  E  T  D  E  Y  G  F  V  Q  G  L  F  V  M  M  R  F  L  F  S  R  E  P  D  S  F  I  T  N  Q  S  M  D  F  L  E  :  E  R  R  K  A  E  M  N  A  S  R  L  C  F  S  L  S  S  Y  L  C  F  L  V  T  K  K  S  L  R  L  P  :  V  S  D  G  R  M  D  Y  R  T  S  A  G  Q  Q  Q  P  T  L  N  L  L  G  F  L  L  N  S  L  T  T  A  L  E  R  A  T  E  D  R  Y  L  L  L  S  K  :  I  Q  D  I  N  E  L  S  R  Q  E  V  D  E  I  I  N  M  C  V  P  K  G  C  I  S  S  S  E  N  I  Q  K  R :   R  Y  V  A  M  L  E  M  C  Q  I  V  G  D  R  N  Q  L  M  T  L  L  L  L  L  A  E  N  V  M  N  I  I  L  V  H  F  Q  D  S :   S  F  E  C  D  N  K  R  Y  S  K  D  D  L  N  L  L  C  G  K  L  I  S  A  L  E  R  L  E  L  L  S  E  :  D  K  T  G  H  D  L  K  V  F  R  R  L  A  S  S  L  K  E  I  S  I  Q  K  S  P  V  *  P  A  I  S  F  F  C  S  F  I  N  F  *  H  R  G  V  *  G  I  *  L  *  C  N  C  I  F  I  F  Y  I  V  L  V  L  Y  F  F  N  P  P  I  C  C  T  Y  C  I  S  Y  L  Q  P  L  L  C  F  L  W  G  S  S  E  C  Y  R  R  Q  I  T  L  E  G  Y  *  *  L  Y  S  Y  R  S  C  P  L  F  I  G  F  C  T  S  I  I  I  L  F  C  V  F  T  V  Q  </second_frame>
            <third_frame>   *  S  Q  C  S  V  S  A  L  L  K  R  N  L  L  F  F  *  E  L  A  T  S  M  V  N  L  G  P  R  C  F  F  Q  W  V  H  M  S  T  Y  L  P  V  R  H  *  I  C  N  *  R :   E  A  T  G  A  W  M  A  N  L  E  E  N  C  Q  L  M  L  I  N  S  E  *  *  *  L  Q  S  *  D  W  C  F  H  L  L  H  W  L  M  H  L  N  F  L  R :   L  K  T  K  L  Y  V  K  S  L  N  L  *  E  V  I  N  Y  F  L  I  K  S  Y  E  K  I  F  L  M  L  M  S  *  Q  W  N  K  *  I  W  L  L  A  Y  L  R  R :   F  G  H  M  K  R  P  M  N  M  V  L  F  K  G  F  L  *  *  C  V  F  F  S  L  V  S  Q  T  L  L  L  Q  T  N  L  W  I  F  W  R :   N  V  G  R  Q  K  *  M  H  L  V  F  A  L  A  *  V  L  I  S  V  F  L  L  R  R  S  L  *  D  C  R :   S  Q  M  V  E  W  T  I  A  L  L  L  V  S  N  S  Q  H  *  I  Y  L  V  F  F  S  T  R  *  L  Q  H  W  K  E  L  L  R  T  D  I  Y  C  L  A  R :   F  K  T  *  M  N  F  Q  D  R  K  W  M  K  S  S  I  C  V  F  P  R  V  V  F  R  R  P  R  T  F  R  K   : G  D  M  S  R  C  W  R  C  A  R  L  L  E  I  G  I  N  L  *  H  Y  C  F  Y  *  R  K  T  *  *  I  L  S  L  F  I  F  R  T   : V  L  L  N  V  T  T  N  A  T  Q  K  M  T  *  I  C  Y  V  E  S  *  F  Q  L  W  R  G  L  N  Y  *  A  R :   I  K  Q  V  M  T  L  K  Y  F  E  D  *  L  V  L  *  K  K  Y  R  F  R  S  H  L  F  D  R  P  S  P  S  F  V  L  S  *  I  F  S  I  G  G  Y  E  E  F  S  C  N  V  I  V  Y  L  S  F  T  *  C  L  S  Y  I  F  L  I  L  Q  S  V  V  H  I  V  Y  H  T  Y  S  L  F  C  A  F  C  G  G  V  L  N  V  T  E  D  R  L  H  *  K  A  I  S  S  Y  T  P  I  G  L  A  P  Y  L  *  V  S  A  L  Q  L  S  Y  Y  F  V  Y  L  L  F  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85214" stop="85369"/>
                    <exon start="85443" stop="85580"/>
                    <exon start="85953" stop="86096"/>
                    <exon start="86264" stop="86386"/>
                    <exon start="86506" stop="86601"/>
                    <exon start="86752" stop="86889"/>
                    <exon start="86969" stop="87069"/>
                    <exon start="87689" stop="87808"/>
                    <exon start="87887" stop="87986"/>
                    <exon start="88430" stop="88513"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1197</number_coding_nucleotides>
                  <number_encoded_amino_acids>399</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LESMQRVCTLEAELALLLRISHKYGKSGAQVLFSMGAYEHISACKALNMQLKGSYRRMDGKFGRELSVDVDKQRMIIAPILRLVFSLTSLVDASEFFEVKNKVVREVIEFVRSHQLLFDQILREDLSDADVLTMEQINLVVGILTKIWPYEETDEYGFVQGLFVMMRFLFSREPDSFITNQSMDFLEERRKAEMNASRLCFSLSSYLCFLVTKKSLRLPVSDGRMDYRTSAGQQQPTLNLLGFLLNSLTTALERATEDRYLLLSKIQDINELSRQEVDEIINMCVPKGCISSSENIQKRRYVAMLEMCQIVGDRNQLMTLLLLLAENVMNIILVHFQDSSFECDNKRYSKDDLNLLCGKLISALERLELLSEDKTGHDLKVFRRLASSLKEISIQKSPV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="101642" PGL_stop="94802"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101642" e_stop="101614"/>
            <exon e_start="101489" e_stop="101408"/>
            <exon e_start="101105" e_stop="101033"/>
            <exon e_start="99802" e_stop="99705"/>
            <exon e_start="99481" e_stop="99389"/>
            <exon e_start="99088" e_stop="99015"/>
            <exon e_start="98901" e_stop="98863"/>
            <exon e_start="98494" e_stop="98406"/>
            <exon e_start="98278" e_stop="98202"/>
            <exon e_start="97962" e_stop="97888"/>
            <exon e_start="97359" e_stop="97228"/>
            <exon e_start="97004" e_stop="96917"/>
            <exon e_start="96824" e_stop="96746"/>
            <exon e_start="96669" e_stop="96579"/>
            <exon e_start="96447" e_stop="96369"/>
            <exon e_start="96271" e_stop="96156"/>
            <exon e_start="95891" e_stop="95574"/>
            <exon e_start="94829" e_stop="94802"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.760" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.833" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.935" e_score="1.000"/>
          <exon-intron don_prob="0.888" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.599" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.732" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.304" e_score="0.906"/>
          <exon-only e_score="0.357"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="101642" e_stop="101614" e_length="29"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="101613" i_stop="101490" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101489" e_stop="101408" e_length="82"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.972">
            <gDNA_intron_boundary i_start="101407" i_stop="101106" i_length="302"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101105" e_stop="101033" e_length="73"/>
          </exon>
          <intron i_serial="3" don_prob="0.760" acc_prob="0.978">
            <gDNA_intron_boundary i_start="101032" i_stop="99803" i_length="1230"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="99802" e_stop="99705" e_length="98"/>
          </exon>
          <intron i_serial="4" don_prob="0.974" acc_prob="0.984">
            <gDNA_intron_boundary i_start="99704" i_stop="99482" i_length="223"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="99481" e_stop="99389" e_length="93"/>
          </exon>
          <intron i_serial="5" don_prob="0.993" acc_prob="0.994">
            <gDNA_intron_boundary i_start="99388" i_stop="99089" i_length="300"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="99088" e_stop="99015" e_length="74"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.966">
            <gDNA_intron_boundary i_start="99014" i_stop="98902" i_length="113"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="98901" e_stop="98863" e_length="39"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.833">
            <gDNA_intron_boundary i_start="98862" i_stop="98495" i_length="368"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="98494" e_stop="98406" e_length="89"/>
          </exon>
          <intron i_serial="8" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="98405" i_stop="98279" i_length="127"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="98278" e_stop="98202" e_length="77"/>
          </exon>
          <intron i_serial="9" don_prob="0.973" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98201" i_stop="97963" i_length="239"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="97962" e_stop="97888" e_length="75"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.990">
            <gDNA_intron_boundary i_start="97887" i_stop="97360" i_length="528"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="97359" e_stop="97228" e_length="132"/>
          </exon>
          <intron i_serial="11" don_prob="0.998" acc_prob="0.935">
            <gDNA_intron_boundary i_start="97227" i_stop="97005" i_length="223"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="97004" e_stop="96917" e_length="88"/>
          </exon>
          <intron i_serial="12" don_prob="0.888" acc_prob="0.971">
            <gDNA_intron_boundary i_start="96916" i_stop="96825" i_length="92"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="96824" e_stop="96746" e_length="79"/>
          </exon>
          <intron i_serial="13" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="96745" i_stop="96670" i_length="76"/>
          </intron>
          <exon e_serial="14" e_score="1.000">
            <gDNA_exon_boundary e_start="96669" e_stop="96579" e_length="91"/>
          </exon>
          <intron i_serial="14" don_prob="0.999" acc_prob="0.599">
            <gDNA_intron_boundary i_start="96578" i_stop="96448" i_length="131"/>
          </intron>
          <exon e_serial="15" e_score="1.000">
            <gDNA_exon_boundary e_start="96447" e_stop="96369" e_length="79"/>
          </exon>
          <intron i_serial="15" don_prob="0.998" acc_prob="0.732">
            <gDNA_intron_boundary i_start="96368" i_stop="96272" i_length="97"/>
          </intron>
          <exon e_serial="16" e_score="1.000">
            <gDNA_exon_boundary e_start="96271" e_stop="96156" e_length="116"/>
          </exon>
          <intron i_serial="16" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="96155" i_stop="95892" i_length="264"/>
          </intron>
          <exon e_serial="17" e_score="0.906">
            <gDNA_exon_boundary e_start="95891" e_stop="95574" e_length="318"/>
          </exon>
          <intron i_serial="17" don_prob="0.000" acc_prob="0.304">
            <gDNA_intron_boundary i_start="95573" i_stop="94830" i_length="744"/>
          </intron>
          <exon e_serial="18" e_score="0.357">
            <gDNA_exon_boundary e_start="94829" e_stop="94802" e_length="28"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101642" stop="101614"/>
              <exon start="101489" stop="101408"/>
              <exon start="101105" stop="101033"/>
              <exon start="99802" stop="99705"/>
              <exon start="99481" stop="99389"/>
              <exon start="99088" stop="99015"/>
              <exon start="98901" stop="98863"/>
              <exon start="98494" stop="98406"/>
              <exon start="98278" stop="98202"/>
              <exon start="97962" stop="97888"/>
              <exon start="97359" stop="97228"/>
              <exon start="97004" stop="96917"/>
              <exon start="96824" stop="96746"/>
              <exon start="96669" stop="96579"/>
              <exon start="96447" stop="96369"/>
              <exon start="96271" stop="96156"/>
              <exon start="95891" stop="95634"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313117" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101475" stop="101408"/>
              <exon start="101105" stop="101033"/>
              <exon start="99802" stop="99705"/>
              <exon start="99481" stop="99389"/>
              <exon start="99088" stop="99015"/>
              <exon start="98901" stop="98883"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98233" stop="98202"/>
              <exon start="97962" stop="97888"/>
              <exon start="97359" stop="97228"/>
              <exon start="97004" stop="96917"/>
              <exon start="96824" stop="96791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97359" stop="97228"/>
              <exon start="97004" stop="96917"/>
              <exon start="96824" stop="96746"/>
              <exon start="96669" stop="96661"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334157" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96621" stop="96579"/>
              <exon start="96447" stop="96369"/>
              <exon start="96271" stop="96156"/>
              <exon start="95891" stop="95574"/>
              <exon start="94829" stop="94802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313116" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCTTCAAGGAATGGCCAAGACTAATGG : ATTTATGGGACATGATATGTTGGCACCATTTACTGCGGCATGGATGATTGATATGGGACCTTTAGTTATAGATAAAGCGGAG : GGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTGGTTTATGGTGCTCAGTATTAG : GGGGGAGTGAGCCTCGTCTTATTGAAGCTGCAAATAAACAACTCAATAAATTGGCATTTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTG : GATCTTGCAAAGGAGCTCATAAATATGTTTACTGCAAATAAGATGGGAAAAGTTTTTTTCACAAGTAGTGGATCAGAAGCTAATGACACTCAG : GTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGC : ATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGG : GCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAG : GTGAGACAGAAGAGGAGTACTCAACTAGGTTGGCAAATAATTTGGAAAATCTTATACTCAAAGAGGGTCCTGAAACA : GTTGCTGCTTTCATTGCGGAACCAGTCATGGGAGGAGCAGGTGTTATAATTCCTCCAGCTACTTATTTCGAAAAG : ATTCAAGCTGTTTTAAAGAAATATGACATTCTTTTCATCGCGGACGAGGTGATATGTGGATTTGGAAGACTTGGGACAATGTTTGGCTGTGATAAGTACAACATTAAGCCTGATCTTGTCTCTATAGCAAAG : GCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTG : GTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAA : GGAAAAAAATATTACTGAGGTAGTGAATAAATTATCACCAAAGTTTCAAGAAGGTTTGAAAGCATTTATAGACAGTCCAATAATTGGAGAG : ATAAGGGGAACTGGTTTAGTACTTTCTACAGAGTTTGTAGATAACAAATCTCCTAATGATCCTTTTCCACCAGAATGGG : GTGTTGGTACATATTTTGGATCACAATGTCAAAAGCATGGTATGTTGGTGAGTTTTTCTGGTGATCATGTAAATATGGCCCCTCCATTCACCTTGAGTCTTGAAGAACTTGATGAG : ATGATAAGCATATATGGGAAAGCATTGAAGGATACTGAAAAAAGAGTGGAAGAATTGAAGTCTCAGAAGAAGTAAAAATCTCATGAAAAAAAAGTTATTTCAAGTTTAAATAAAAACTTTGTTGTAGTTTTTTTTTTTTTTTTGAGTGTTGCTACTCATAACATAAGAGTGTTTTATTATATTCTATTGTTTTAATGAGAGCAACATTTGAATAAATTGTGTCATTTTTTATTTCAATATGATTGAAATTTTAAATTTCTTTTAAGTGACATCGAGATGGTTAAAAATGATATACAACATTAATAGAATATAACATTG : GTATGAAGCAAGTTGGTCACCACAACTA</gDNA_template>
            <first_frame> K  L  Q  G  M  A  K  T  N  G :   F  M  G  H  D  M  L  A  P  F  T  A  A  W  M  I  D  M  G  P  L  V  I  D  K  A  E  :  G  S  Y  V  Y  D  V  N  G  K  K  Y  L  D  S  L  S  G  L  W  C  S  V  L   : G  G  S  E  P  R  L  I  E  A  A  N  K  Q  L  N  K  L  A  F  Y  H  S  F  W  N  R  T  T  K  P  S  L  :  D  L  A  K  E  L  I  N  M  F  T  A  N  K  M  G  K  V  F  F  T  S  S  G  S  E  A  N  D  T  Q  :  V  K  L  V  W  Y  Y  N  N  A  I  G  R  P  N  K  K  K  I  I  S  R  K  N  A :   Y  H  G  S  T  Y  M  T  A  G  L  S  G :   L  P  S  L  H  L  K  F  D  L  P  P  P  Y  I  L  H  T  D  C  P  H  Y  W  N  Y  H  L  P   : G  E  T  E  E  E  Y  S  T  R  L  A  N  N  L  E  N  L  I  L  K  E  G  P  E  T  :  V  A  A  F  I  A  E  P  V  M  G  G  A  G  V  I  I  P  P  A  T  Y  F  E  K  :  I  Q  A  V  L  K  K  Y  D  I  L  F  I  A  D  E  V  I  C  G  F  G  R  L  G  T  M  F  G  C  D  K  Y  N  I  K  P  D  L  V  S  I  A  K  :  A  L  S  G  G  Y  I  P  I  G  A  V  L  V  S  E  E  I  S  K  V  I  M  S  Q  S  N  Q  L   : G  V  F  C  H  G  F  T  Y  S  G  H  P  V  A  C  A  V  A  L  E  A  L  K  I  Y  K :   E  K  N  I  T  E  V  V  N  K  L  S  P  K  F  Q  E  G  L  K  A  F  I  D  S  P  I  I  G  E  :  I  R  G  T  G  L  V  L  S  T  E  F  V  D  N  K  S  P  N  D  P  F  P  P  E  W   : G  V  G  T  Y  F  G  S  Q  C  Q  K  H  G  M  L  V  S  F  S  G  D  H  V  N  M  A  P  P  F  T  L  S  L  E  E  L  D  E  :  M  I  S  I  Y  G  K  A  L  K  D  T  E  K  R  V  E  E  L  K  S  Q  K  K  *  K  S  H  E  K  K  V  I  S  S  L  N  K  N  F  V  V  V  F  F  F  F  L  S  V  A  T  H  N  I  R  V  F  Y  Y  I  L  L  F  *  *  E  Q  H  L  N  K  L  C  H  F  L  F  Q  Y  D  *  N  F  K  F  L  L  S  D  I  E  M  V  K  N  D  I  Q  H  *  *  N  I  T  L  :  V  *  S  K  L  V  T  T  T  </first_frame>
            <second_frame>  S  F  K  E  W  P  R  L  M   : D  L  W  D  M  I  C  W  H  H  L  L  R  H  G  *  L  I  W  D  L  *  L  *  I  K  R  R :   V  L  M  S  M  T  *  M  E  R  S  T  L  I  L  Y  L  V  Y  G  A  Q  Y  *  :  G  G  V  S  L  V  L  L  K  L  Q  I  N  N  S  I  N  W  H  F  T  T  H  F  G  I  V  P  Q  S  L  L  W :   I  L  Q  R  S  S  *  I  C  L  L  Q  I  R  W  E  K  F  F  S  Q  V  V  D  Q  K  L  M  T  L  R :   *  S  W  C  G  I  T  T  M  P  L  G  G  Q  T  K  R  K  L  F  L  E  K  M   : H  T  M  A  P  L  I  *  L  P  V  S  P   : G  F  H  H  Y  I  *  N  L  I  Y  H  L  H  I  F  F  T  L  I  A  L  I  I  G  T  I  T  C  Q  :  V  R  Q  K  R  S  T  Q  L  G  W  Q  I  I  W  K  I  L  Y  S  K  R  V  L  K  Q :   L  L  L  S  L  R  N  Q  S  W  E  E  Q  V  L  *  F  L  Q  L  L  I  S  K  R :   F  K  L  F  *  R  N  M  T  F  F  S  S  R  T  R  *  Y  V  D  L  E  D  L  G  Q  C  L  A  V  I  S  T  T  L  S  L  I  L  S  L  *  Q  R :   L  F  L  V  D  I  Y  Q  L  V  L  C  L  *  V  K  K  F  L  R  S  *  C  L  K  A  I  N  L  :  V  F  F  A  M  D  L  L  I  L  D  I  L  L  R  V  R  L  H  W  K  H  *  K  S  I   : R  K  K  I  L  L  R  *  *  I  N  Y  H  Q  S  F  K  K  V  *  K  H  L  *  T  V  Q  *  L  E  R :   *  G  E  L  V  *  Y  F  L  Q  S  L  *  I  T  N  L  L  M  I  L  F  H  Q  N  G  :  V  L  V  H  I  L  D  H  N  V  K  S  M  V  C  W  *  V  F  L  V  I  M  *  I  W  P  L  H  S  P  *  V  L  K  N  L  M  R :   *  *  A  Y  M  G  K  H  *  R  I  L  K  K  E  W  K  N  *  S  L  R  R  S  K  N  L  M  K  K  K  L  F  Q  V  *  I  K  T  L  L  *  F  F  F  F  F  *  V  L  L  L  I  T  *  E  C  F  I  I  F  Y  C  F  N  E  S  N  I  *  I  N  C  V  I  F  Y  F  N  M  I  E  I  L  N  F  F  *  V  T  S  R  W  L  K  M  I  Y  N  I  N  R  I  *  H  W :   Y  E  A  S  W  S  P  Q  L </second_frame>
            <third_frame>   A  S  R  N  G  Q  D  *  W  :  I  Y  G  T  *  Y  V  G  T  I  Y  C  G  M  D  D  *  Y  G  T  F  S  Y  R  *  S  G   : G  F  L  C  L  *  R  K  W  K  E  V  P  *  F  F  I  W  F  M  V  L  S  I  R :   G  E  *  A  S  S  Y  *  S  C  K  *  T  T  Q  *  I  G  I  L  P  L  I  L  E  S  Y  H  K  A  F  F   : G  S  C  K  G  A  H  K  Y  V  Y  C  K  *  D  G  K  S  F  F  H  K  *  W  I  R  S  *  *  H  S   : G  E  V  G  V  V  L  Q  Q  C  H  W  E  A  K  Q  K  E  N  Y  F  S  K  K  C  :  I  P  W  L  H  L  Y  D  C  R  S  L  R  :  A  S  I  T  T  S  K  I  *  F  T  T  S  I  Y  S  S  H  *  L  P  S  L  L  E  L  S  L  A  R :   *  D  R  R  G  V  L  N  *  V  G  K  *  F  G  K  S  Y  T  Q  R  G  S  *  N   : S  C  C  F  H  C  G  T  S  H  G  R  S  R  C  Y  N  S  S  S  Y  L  F  R  K   : D  S  S  C  F  K  E  I  *  H  S  F  H  R  G  R  G  D  M  W  I  W  K  T  W  D  N  V  W  L  *  *  V  Q  H  *  A  *  S  C  L  Y  S  K   : G  S  F  W  W  I  Y  T  N  W  C  C  A  C  K  *  R  N  F  *  G  H  N  V  S  K  Q  S  T  W :   C  F  L  P  W  I  Y  L  F  W  T  S  C  C  V  C  G  C  I  G  S  T  K  N  L  *  :  G  K  K  Y  Y  *  G  S  E  *  I  I  T  K  V  S  R  R  F  E  S  I  Y  R  Q  S  N  N  W  R   : D  K  G  N  W  F  S  T  F  Y  R  V  C  R  *  Q  I  S  *  *  S  F  S  T  R  M  G :   C  W  Y  I  F  W  I  T  M  S  K  A  W  Y  V  G  E  F  F  W  *  S  C  K  Y  G  P  S  I  H  L  E  S  *  R  T  *  *   : D  D  K  H  I  W  E  S  I  E  G  Y  *  K  K  S  G  R  I  E  V  S  E  E  V  K  I  S  *  K  K  S  Y  F  K  F  K  *  K  L  C  C  S  F  F  F  F  F  E  C  C  Y  S  *  H  K  S  V  L  L  Y  S  I  V  L  M  R  A  T  F  E  *  I  V  S  F  F  I  S  I  *  L  K  F  *  I  S  F  K  *  H  R  D  G  *  K  *  Y  T  T  L  I  E  Y  N  I   : G  M  K  Q  V  G  H  H  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101642" stop="101614"/>
                    <exon start="101489" stop="101408"/>
                    <exon start="101105" stop="101033"/>
                    <exon start="99802" stop="99705"/>
                    <exon start="99481" stop="99389"/>
                    <exon start="99088" stop="99015"/>
                    <exon start="98901" stop="98863"/>
                    <exon start="98494" stop="98406"/>
                    <exon start="98278" stop="98202"/>
                    <exon start="97962" stop="97888"/>
                    <exon start="97359" stop="97228"/>
                    <exon start="97004" stop="96917"/>
                    <exon start="96824" stop="96746"/>
                    <exon start="96669" stop="96579"/>
                    <exon start="96447" stop="96369"/>
                    <exon start="96271" stop="96156"/>
                    <exon start="95891" stop="95817"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1386</number_coding_nucleotides>
                  <number_encoded_amino_acids>462</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLQGMAKTNGFMGHDMLAPFTAAWMIDMGPLVIDKAEGSYVYDVNGKKYLDSLSGLWCSVLGGSEPRLIEAANKQLNKLAFYHSFWNRTTKPSLDLAKELINMFTANKMGKVFFTSSGSEANDTQVKLVWYYNNAIGRPNKKKIISRKNAYHGSTYMTAGLSGLPSLHLKFDLPPPYILHTDCPHYWNYHLPGETEEEYSTRLANNLENLILKEGPETVAAFIAEPVMGGAGVIIPPATYFEKIQAVLKKYDILFIADEVICGFGRLGTMFGCDKYNIKPDLVSIAKALSGGYIPIGAVLVSEEISKVIMSQSNQLGVFCHGFTYSGHPVACAVALEALKIYKEKNITEVVNKLSPKFQEGLKAFIDSPIIGEIRGTGLVLSTEFVDNKSPNDPFPPEWGVGTYFGSQCQKHGMLVSFSGDHVNMAPPFTLSLEELDEMISIYGKALKDTEKRVEELKSQKK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="101642" e_stop="101614"/>
            <exon e_start="101489" e_stop="101408"/>
            <exon e_start="101105" e_stop="101033"/>
            <exon e_start="99802" e_stop="99705"/>
            <exon e_start="99088" e_stop="99015"/>
            <exon e_start="98901" e_stop="98863"/>
            <exon e_start="98494" e_stop="98406"/>
            <exon e_start="98278" e_stop="98202"/>
            <exon e_start="97962" e_stop="97888"/>
            <exon e_start="97359" e_stop="97228"/>
            <exon e_start="97004" e_stop="96917"/>
            <exon e_start="96824" e_stop="96746"/>
            <exon e_start="96669" e_stop="96661"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.760" acc_prob="0.978" e_score="1.000"/>
          <exon-intron don_prob="0.974" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.833" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.973" acc_prob="1.000" e_score="0.983"/>
          <exon-intron don_prob="0.999" acc_prob="0.990" e_score="0.840"/>
          <exon-intron don_prob="0.998" acc_prob="0.935" e_score="0.955"/>
          <exon-intron don_prob="0.888" acc_prob="0.971" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="101642" e_stop="101614" e_length="29"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="101613" i_stop="101490" i_length="124"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="101489" e_stop="101408" e_length="82"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.972">
            <gDNA_intron_boundary i_start="101407" i_stop="101106" i_length="302"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="101105" e_stop="101033" e_length="73"/>
          </exon>
          <intron i_serial="3" don_prob="0.760" acc_prob="0.978">
            <gDNA_intron_boundary i_start="101032" i_stop="99803" i_length="1230"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="99802" e_stop="99705" e_length="98"/>
          </exon>
          <intron i_serial="4" don_prob="0.974" acc_prob="0.994">
            <gDNA_intron_boundary i_start="99704" i_stop="99089" i_length="616"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="99088" e_stop="99015" e_length="74"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.966">
            <gDNA_intron_boundary i_start="99014" i_stop="98902" i_length="113"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="98901" e_stop="98863" e_length="39"/>
          </exon>
          <intron i_serial="6" don_prob="0.997" acc_prob="0.833">
            <gDNA_intron_boundary i_start="98862" i_stop="98495" i_length="368"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="98494" e_stop="98406" e_length="89"/>
          </exon>
          <intron i_serial="7" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="98405" i_stop="98279" i_length="127"/>
          </intron>
          <exon e_serial="8" e_score="0.983">
            <gDNA_exon_boundary e_start="98278" e_stop="98202" e_length="77"/>
          </exon>
          <intron i_serial="8" don_prob="0.973" acc_prob="1.000">
            <gDNA_intron_boundary i_start="98201" i_stop="97963" i_length="239"/>
          </intron>
          <exon e_serial="9" e_score="0.840">
            <gDNA_exon_boundary e_start="97962" e_stop="97888" e_length="75"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.990">
            <gDNA_intron_boundary i_start="97887" i_stop="97360" i_length="528"/>
          </intron>
          <exon e_serial="10" e_score="0.955">
            <gDNA_exon_boundary e_start="97359" e_stop="97228" e_length="132"/>
          </exon>
          <intron i_serial="10" don_prob="0.998" acc_prob="0.935">
            <gDNA_intron_boundary i_start="97227" i_stop="97005" i_length="223"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="97004" e_stop="96917" e_length="88"/>
          </exon>
          <intron i_serial="11" don_prob="0.888" acc_prob="0.971">
            <gDNA_intron_boundary i_start="96916" i_stop="96825" i_length="92"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="96824" e_stop="96746" e_length="79"/>
          </exon>
          <intron i_serial="12" don_prob="0.997" acc_prob="0.997">
            <gDNA_intron_boundary i_start="96745" i_stop="96670" i_length="76"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="96669" e_stop="96661" e_length="9"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101642" stop="101614"/>
              <exon start="101489" stop="101408"/>
              <exon start="101105" stop="101033"/>
              <exon start="99802" stop="99705"/>
              <exon start="99088" stop="99015"/>
              <exon start="98901" stop="98863"/>
              <exon start="98494" stop="98406"/>
              <exon start="98278" stop="98220"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334159" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="98233" stop="98202"/>
              <exon start="97962" stop="97888"/>
              <exon start="97359" stop="97228"/>
              <exon start="97004" stop="96917"/>
              <exon start="96824" stop="96791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334161" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97359" stop="97228"/>
              <exon start="97004" stop="96917"/>
              <exon start="96824" stop="96746"/>
              <exon start="96669" stop="96661"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334157" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGCTTCAAGGAATGGCCAAGACTAATGG : ATTTATGGGACATGATATGTTGGCACCATTTACTGCGGCATGGATGATTGATATGGGACCTTTAGTTATAGATAAAGCGGAG : GGTTCTTATGTCTATGACGTAAATGGAAAGAAGTACCTTGATTCTTTATCTGGTTTATGGTGCTCAGTATTAG : GGGGGAGTGAGCCTCGTCTTATTGAAGCTGCAAATAAACAACTCAATAAATTGGCATTTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTG : GTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGC : ATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGG : GCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAG : GTGAGACAGAAGAGGAGTACTCAACTAGGTTGGCAAATAATTTGGAAAATCTTATACTCAAAGAGGGTCCTGAAACA : GTTGCTGCTTTCATTGCGGAACCAGTCATGGGAGGAGCAGGTGTTATAATTCCTCCAGCTACTTATTTCGAAAAG : ATTCAAGCTGTTTTAAAGAAATATGACATTCTTTTCATCGCGGACGAGGTGATATGTGGATTTGGAAGACTTGGGACAATGTTTGGCTGTGATAAGTACAACATTAAGCCTGATCTTGTCTCTATAGCAAAG : GCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTG : GTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAA : GGAAAAAAA</gDNA_template>
            <first_frame> K  L  Q  G  M  A  K  T  N  G :   F  M  G  H  D  M  L  A  P  F  T  A  A  W  M  I  D  M  G  P  L  V  I  D  K  A  E  :  G  S  Y  V  Y  D  V  N  G  K  K  Y  L  D  S  L  S  G  L  W  C  S  V  L   : G  G  S  E  P  R  L  I  E  A  A  N  K  Q  L  N  K  L  A  F  Y  H  S  F  W  N  R  T  T  K  P  S  L  :  V  K  L  V  W  Y  Y  N  N  A  I  G  R  P  N  K  K  K  I  I  S  R  K  N  A :   Y  H  G  S  T  Y  M  T  A  G  L  S  G :   L  P  S  L  H  L  K  F  D  L  P  P  P  Y  I  L  H  T  D  C  P  H  Y  W  N  Y  H  L  P   : G  E  T  E  E  E  Y  S  T  R  L  A  N  N  L  E  N  L  I  L  K  E  G  P  E  T  :  V  A  A  F  I  A  E  P  V  M  G  G  A  G  V  I  I  P  P  A  T  Y  F  E  K  :  I  Q  A  V  L  K  K  Y  D  I  L  F  I  A  D  E  V  I  C  G  F  G  R  L  G  T  M  F  G  C  D  K  Y  N  I  K  P  D  L  V  S  I  A  K  :  A  L  S  G  G  Y  I  P  I  G  A  V  L  V  S  E  E  I  S  K  V  I  M  S  Q  S  N  Q  L   : G  V  F  C  H  G  F  T  Y  S  G  H  P  V  A  C  A  V  A  L  E  A  L  K  I  Y  K :   E  K   </first_frame>
            <second_frame>  S  F  K  E  W  P  R  L  M   : D  L  W  D  M  I  C  W  H  H  L  L  R  H  G  *  L  I  W  D  L  *  L  *  I  K  R  R :   V  L  M  S  M  T  *  M  E  R  S  T  L  I  L  Y  L  V  Y  G  A  Q  Y  *  :  G  G  V  S  L  V  L  L  K  L  Q  I  N  N  S  I  N  W  H  F  T  T  H  F  G  I  V  P  Q  S  L  L  W :   *  S  W  C  G  I  T  T  M  P  L  G  G  Q  T  K  R  K  L  F  L  E  K  M   : H  T  M  A  P  L  I  *  L  P  V  S  P   : G  F  H  H  Y  I  *  N  L  I  Y  H  L  H  I  F  F  T  L  I  A  L  I  I  G  T  I  T  C  Q  :  V  R  Q  K  R  S  T  Q  L  G  W  Q  I  I  W  K  I  L  Y  S  K  R  V  L  K  Q :   L  L  L  S  L  R  N  Q  S  W  E  E  Q  V  L  *  F  L  Q  L  L  I  S  K  R :   F  K  L  F  *  R  N  M  T  F  F  S  S  R  T  R  *  Y  V  D  L  E  D  L  G  Q  C  L  A  V  I  S  T  T  L  S  L  I  L  S  L  *  Q  R :   L  F  L  V  D  I  Y  Q  L  V  L  C  L  *  V  K  K  F  L  R  S  *  C  L  K  A  I  N  L  :  V  F  F  A  M  D  L  L  I  L  D  I  L  L  R  V  R  L  H  W  K  H  *  K  S  I   : R  K  K  </second_frame>
            <third_frame>   A  S  R  N  G  Q  D  *  W  :  I  Y  G  T  *  Y  V  G  T  I  Y  C  G  M  D  D  *  Y  G  T  F  S  Y  R  *  S  G   : G  F  L  C  L  *  R  K  W  K  E  V  P  *  F  F  I  W  F  M  V  L  S  I  R :   G  E  *  A  S  S  Y  *  S  C  K  *  T  T  Q  *  I  G  I  L  P  L  I  L  E  S  Y  H  K  A  F  F   : G  E  V  G  V  V  L  Q  Q  C  H  W  E  A  K  Q  K  E  N  Y  F  S  K  K  C  :  I  P  W  L  H  L  Y  D  C  R  S  L  R  :  A  S  I  T  T  S  K  I  *  F  T  T  S  I  Y  S  S  H  *  L  P  S  L  L  E  L  S  L  A  R :   *  D  R  R  G  V  L  N  *  V  G  K  *  F  G  K  S  Y  T  Q  R  G  S  *  N   : S  C  C  F  H  C  G  T  S  H  G  R  S  R  C  Y  N  S  S  S  Y  L  F  R  K   : D  S  S  C  F  K  E  I  *  H  S  F  H  R  G  R  G  D  M  W  I  W  K  T  W  D  N  V  W  L  *  *  V  Q  H  *  A  *  S  C  L  Y  S  K   : G  S  F  W  W  I  Y  T  N  W  C  C  A  C  K  *  R  N  F  *  G  H  N  V  S  K  Q  S  T  W :   C  F  L  P  W  I  Y  L  F  W  T  S  C  C  V  C  G  C  I  G  S  T  K  N  L  *  :  G  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101642" stop="101614"/>
                    <exon start="101489" stop="101408"/>
                    <exon start="101105" stop="101033"/>
                    <exon start="99802" stop="99705"/>
                    <exon start="99088" stop="99015"/>
                    <exon start="98901" stop="98863"/>
                    <exon start="98494" stop="98406"/>
                    <exon start="98278" stop="98202"/>
                    <exon start="97962" stop="97888"/>
                    <exon start="97359" stop="97228"/>
                    <exon start="97004" stop="96917"/>
                    <exon start="96824" stop="96746"/>
                    <exon start="96669" stop="96663"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>942</number_coding_nucleotides>
                  <number_encoded_amino_acids>314</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KLQGMAKTNGFMGHDMLAPFTAAWMIDMGPLVIDKAEGSYVYDVNGKKYLDSLSGLWCSVLGGSEPRLIEAANKQLNKLAFYHSFWNRTTKPSLVKLVWYYNNAIGRPNKKKIISRKNAYHGSTYMTAGLSGLPSLHLKFDLPPPYILHTDCPHYWNYHLPGETEEEYSTRLANNLENLILKEGPETVAAFIAEPVMGGAGVIIPPATYFEKIQAVLKKYDILFIADEVICGFGRLGTMFGCDKYNIKPDLVSIAKALSGGYIPIGAVLVSEEISKVIMSQSNQLGVFCHGFTYSGHPVACAVALEALKIYKEK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="97205" e_stop="96663"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.983"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.983">
            <gDNA_exon_boundary e_start="97205" e_stop="96663" e_length="543"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97205" stop="96663"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334158" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATTTGACGATCGCTTATTCTTTATATTTACTTATATTCTAAATTCTTCTATTTATCTTTCTATCAATCGAATTAATAAATTTAAACTCTAATTAGAATTAAAATAAGTGTGCTATATAGATATATATATATAATATTTACATAATCAGATCACTTCAAATTCGTAATTCTTAATTTGACTATTTTTAACATTGTTTTAAGGCTCTTTCTGGTGGATATATACCAATTGGTGCTGTGCTTGTAAGTGAAGAAATTTCTAAGGTCATAATGTCTCAAAGCAATCAACTTGGTGAGCATATAATATAAATGTGATTGAATATTTACTTAATATATATAGTATTCATCTATTTATATTTTAATAATATTTTTTTCTACAATTAGGTGTTTTTTGCCATGGATTTACTTATTCTGGACATCCTGTTGCGTGTGCGGTTGCATTGGAAGCACTAAAAATCTATAAGTACGTATCTAATTAGTTAAATATTTTTTTTATATCGTCAATATACTAAAAATATTTATATTTAATTTTTTTTCAGGGAAAAA</gDNA_template>
            <first_frame> D  L  T  I  A  Y  S  L  Y  L  L  I  F  *  I  L  L  F  I  F  L  S  I  E  L  I  N  L  N  S  N  *  N  *  N  K  C  A  I  *  I  Y  I  Y  N  I  Y  I  I  R  S  L  Q  I  R  N  S  *  F  D  Y  F  *  H  C  F  K  A  L  S  G  G  Y  I  P  I  G  A  V  L  V  S  E  E  I  S  K  V  I  M  S  Q  S  N  Q  L  G  E  H  I  I  *  M  *  L  N  I  Y  L  I  Y  I  V  F  I  Y  L  Y  F  N  N  I  F  F  Y  N  *  V  F  F  A  M  D  L  L  I  L  D  I  L  L  R  V  R  L  H  W  K  H  *  K  S  I  S  T  Y  L  I  S  *  I  F  F  L  Y  R  Q  Y  T  K  N  I  Y  I  *  F  F  F  R  E  K </first_frame>
            <second_frame>  I  *  R  S  L  I  L  Y  I  Y  L  Y  S  K  F  F  Y  L  S  F  Y  Q  S  N  *  *  I  *  T  L  I  R  I  K  I  S  V  L  Y  R  Y  I  Y  I  I  F  T  *  S  D  H  F  K  F  V  I  L  N  L  T  I  F  N  I  V  L  R  L  F  L  V  D  I  Y  Q  L  V  L  C  L  *  V  K  K  F  L  R  S  *  C  L  K  A  I  N  L  V  S  I  *  Y  K  C  D  *  I  F  T  *  Y  I  *  Y  S  S  I  Y  I  L  I  I  F  F  S  T  I  R  C  F  L  P  W  I  Y  L  F  W  T  S  C  C  V  C  G  C  I  G  S  T  K  N  L  *  V  R  I  *  L  V  K  Y  F  F  Y  I  V  N  I  L  K  I  F  I  F  N  F  F  S  G  K   </second_frame>
            <third_frame>   F  D  D  R  L  F  F  I  F  T  Y  I  L  N  S  S  I  Y  L  S  I  N  R  I  N  K  F  K  L  *  L  E  L  K  *  V  C  Y  I  D  I  Y  I  *  Y  L  H  N  Q  I  T  S  N  S  *  F  L  I  *  L  F  L  T  L  F  *  G  S  F  W  W  I  Y  T  N  W  C  C  A  C  K  *  R  N  F  *  G  H  N  V  S  K  Q  S  T  W  *  A  Y  N  I  N  V  I  E  Y  L  L  N  I  Y  S  I  H  L  F  I  F  *  *  Y  F  F  L  Q  L  G  V  F  C  H  G  F  T  Y  S  G  H  P  V  A  C  A  V  A  L  E  A  L  K  I  Y  K  Y  V  S  N  *  L  N  I  F  F  I  S  S  I  Y  *  K  Y  L  Y  L  I  F  F  Q  G  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C12HBa0131G17.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="99745" e_stop="99705"/>
            <exon e_start="99481" e_stop="99389"/>
            <exon e_start="99088" e_stop="98863"/>
            <exon e_start="98494" e_stop="98406"/>
            <exon e_start="98278" e_stop="98254"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.994" e_score="0.957"/>
          <exon-intron don_prob="0.997" acc_prob="0.833" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="99745" e_stop="99705" e_length="41"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.984">
            <gDNA_intron_boundary i_start="99704" i_stop="99482" i_length="223"/>
          </intron>
          <exon e_serial="2" e_score="0.957">
            <gDNA_exon_boundary e_start="99481" e_stop="99389" e_length="93"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.994">
            <gDNA_intron_boundary i_start="99388" i_stop="99089" i_length="300"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="99088" e_stop="98863" e_length="226"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.833">
            <gDNA_intron_boundary i_start="98862" i_stop="98495" i_length="368"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="98494" e_stop="98406" e_length="89"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="98405" i_stop="98279" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="98278" e_stop="98254" e_length="25"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="99745" stop="99705"/>
              <exon start="99481" stop="99389"/>
              <exon start="99088" stop="98863"/>
              <exon start="98494" stop="98406"/>
              <exon start="98278" stop="98254"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334162" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTACCACTCATTTTGGAATCGTACCACAAAGCCTTCTTTG : GATCTTGCAAAGGAGCTCATAAATATGTTTACTGCAAATAAGATGGGAAAAGTTTTTTTCACAAGTAGTGGATCAGAAGCTAATGACACTCAG : GTGAAGTTGGTGTGGTATTACAACAATGCCATTGGGAGGCCAAACAAAAAGAAAATTATTTCTCGAAAAAATGCGTAATCTTTTTTTATTATTTTTTCTAAAAAAATTATTTTTTATATTTTTATTATTTTATTTTTTTTCTACTTTGGCTAATACAATATTCTTTATATATATCACCTTCAAACAGATACCATGGCTCCACTTATATGACTGCCGGTCTCTCCGG : GCTTCCATCACTACATCTAAAATTTGATTTACCACCTCCATATATTCTTCACACTGATTGCCCTCATTATTGGAACTATCACTTGCCAG : GTGAGACAGAAGAGGAGTACTCAAC</gDNA_template>
            <first_frame> F  T  T  H  F  G  I  V  P  Q  S  L  L  W :   I  L  Q  R  S  S  *  I  C  L  L  Q  I  R  W  E  K  F  F  S  Q  V  V  D  Q  K  L  M  T  L  R :   *  S  W  C  G  I  T  T  M  P  L  G  G  Q  T  K  R  K  L  F  L  E  K  M  R  N  L  F  L  L  F  F  L  K  K  L  F  F  I  F  L  L  F  Y  F  F  S  T  L  A  N  T  I  F  F  I  Y  I  T  F  K  Q  I  P  W  L  H  L  Y  D  C  R  S  L  R  :  A  S  I  T  T  S  K  I  *  F  T  T  S  I  Y  S  S  H  *  L  P  S  L  L  E  L  S  L  A  R :   *  D  R  R  G  V  L  N </first_frame>
            <second_frame>  L  P  L  I  L  E  S  Y  H  K  A  F  F   : G  S  C  K  G  A  H  K  Y  V  Y  C  K  *  D  G  K  S  F  F  H  K  *  W  I  R  S  *  *  H  S   : G  E  V  G  V  V  L  Q  Q  C  H  W  E  A  K  Q  K  E  N  Y  F  S  K  K  C  V  I  F  F  Y  Y  F  F  *  K  N  Y  F  L  Y  F  Y  Y  F  I  F  F  L  L  W  L  I  Q  Y  S  L  Y  I  S  P  S  N  R  Y  H  G  S  T  Y  M  T  A  G  L  S  G :   L  P  S  L  H  L  K  F  D  L  P  P  P  Y  I  L  H  T  D  C  P  H  Y  W  N  Y  H  L  P   : G  E  T  E  E  E  Y  S   </second_frame>
            <third_frame>   Y  H  S  F  W  N  R  T  T  K  P  S  L  :  D  L  A  K  E  L  I  N  M  F  T  A  N  K  M  G  K  V  F  F  T  S  S  G  S  E  A  N  D  T  Q  :  V  K  L  V  W  Y  Y  N  N  A  I  G  R  P  N  K  K  K  I  I  S  R  K  N  A  *  S  F  F  I  I  F  S  K  K  I  I  F  Y  I  F  I  I  L  F  F  F  Y  F  G  *  Y  N  I  L  Y  I  Y  H  L  Q  T  D  T  M  A  P  L  I  *  L  P  V  S  P   : G  F  H  H  Y  I  *  N  L  I  Y  H  L  H  I  F  F  T  L  I  A  L  I  I  G  T  I  T  C  Q  :  V  R  Q  K  R  S  T  Q  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99084" stop="98863"/>
                    <exon start="98494" stop="98468"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SWCGITTMPLGGQTKRKLFLEKMRNLFLLFFLKKLFFIFLLFYFFSTLANTIFFIYITFKQIPWLHLYDCRSLRASITTSKI*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="98987" stop="98863"/>
                    <exon start="98494" stop="98406"/>
                    <exon start="98278" stop="98256"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>237</number_coding_nucleotides>
                  <number_encoded_amino_acids>79</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNYFLYFYYFIFFLLWLIQYSLYISPSNRYHGSTYMTAGLSGLPSLHLKFDLPPPYILHTDCPHYWNYHLPGETEEEYS</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0131G17.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="4" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="99743" stop="99705"/>
                    <exon start="99481" stop="99389"/>
                    <exon start="99088" stop="99011"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YHSFWNRTTKPSLDLAKELINMFTANKMGKVFFTSSGSEANDTQVKLVWYYNNAIGRPNKKKIISRKNA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 24 chains have been computed
$ 
$ memory statistics:
$ 98016 bytes spliced alignments in total
$ 20 spliced alignments have been stored
$ 4900 bytes was the average size of a spliced alignment
$ 20464 bytes predicted gene locations in total
$ 11 predicted gene locations have been stored
$ 1860 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 25 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 13:52:03
-->
