<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 08:47:53"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C12HBa0011D12-Anh3I/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C12HBa0011D12-Anh3I/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C12HBa0011D12-Anh3I/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M7236" ref_strand="+" ref_description="SGN-M7236 C2_At2g19450 [cosii_markers]">
      <seq>cacttctgatgtgctgtcttagtcttccgattttccctcttgctgcttttcttgtcgagaaaatggcacagaagaagtatatgactgaacatgtagttgtcactcttcacataattataacgacagcttccattttgtatccagttctggtcatcctcaggtgtgattctgcttttctatcgggtgtcacactgatgatgtttgcttgcattgtgtggatgaaactagtttcttatgcacatacaaattatgatatgagacagcttgcaaagtctgtgaatgagggtgagaattccgaaatcaactactcttacaatgttagtttcgagagtttggcttacttcatggttgctccaactttatgctatcagggttggctggcccgccaactcatcaagctggtaatttttacaggattaatgggatttatcattgagcagtatattaacccgattgtgcgaagctcacgacatccatttgaaggaaaccttttatacgccatcgagagggtattgaagctttcagttccaattttatatgtctggctctgcatgttctacagcctctttcatctttggttaaatatacttgcggaagttctgcgatttggggatcgtgagttctataaagattggtggaacgcaaaaacaattgatgagtattggagactttggaatatgcctgtacataagtggatggttcgtcacatctatttcccatgcttaagaaatggcatacctaagggagttgcaatggtgatctctttctttatatctgctgttttccatgagctgtgtattgctgttccttgtcggctattcaagttttgggcattccttggaatcatgtttcagattcccttggtcatactaacgaacttcctgcaaaacaagttcaaaaactcgaatgtgggcaacatgacattctggtgctttttctgcattgttggtcaaccaatgtgtgtgcttctgtattaccatgatgtgatgaatagaaatggtagctcaagttaaagcttcatcgtcgatcattttgttggaccgcgactcactagtgagtatcgcagttttgaactatctgatgctttacttatatgcttgaaatggagaaaattcttttctaaaatttgacaccaaggagagtgaacagaattgttgctttgtattatatctttcttttgatatttaagaaatgtatatcgatttttgttgaggtaaaatgtcataagctcaaattagtgatagtgtt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C12HBa0011D12-Anh3I/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C12HBa0011D12.1" temp_strand="-" temp_description="C12HBa0011D12.1  AC216345.1 htgs_phase:2 submitted_to_sgn_as:C12HBa0011D12 upload_account_name:italy *** SEQUENCING IN PROGRESS ***">
        <position start="41829" stop="35655"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="41613" g_stop="41598" g_length="16"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="16" r_length="16" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41597" i_stop="41516" i_length="82">
            <donor d_prob="0.825" d_score="0.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41515" g_stop="41440" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="17" r_stop="92" r_length="76" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41439" i_stop="41229" i_length="211">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.906" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="41228" g_stop="41161" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="93" r_stop="160" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="41160" i_stop="40389" i_length="772">
            <donor d_prob="0.899" d_score="1.00"/>
            <acceptor a_prob="0.926" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="40388" g_stop="40265" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="284" r_length="124" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="40264" i_stop="40084" i_length="181">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="40083" g_stop="39997" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="285" r_stop="371" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="39996" i_stop="39271" i_length="726">
            <donor d_prob="0.883" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="39270" g_stop="39202" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="440" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="39201" i_stop="39119" i_length="83">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.764" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="39118" g_stop="38982" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="441" r_stop="577" r_length="137" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="38981" i_stop="38286" i_length="696">
            <donor d_prob="0.989" d_score="1.00"/>
            <acceptor a_prob="0.669" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="38285" g_stop="38204" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="659" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="38203" i_stop="38082" i_length="122">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.215" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="38081" g_stop="38061" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="680" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="38060" i_stop="37893" i_length="168">
            <donor d_prob="0.999" d_score="0.00"/>
            <acceptor a_prob="0.545" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="37892" g_stop="37830" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="681" r_stop="743" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="37829" i_stop="36854" i_length="976">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="36853" g_stop="36806" g_length="48"/>
          <reference_exon_boundary r_type="cDNA" r_start="744" r_stop="791" r_length="48" r_score="1.000"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="36805" i_stop="36674" i_length="132">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.099" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="36673" g_stop="36611" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="792" r_stop="854" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="36610" i_stop="36441" i_length="170">
            <donor d_prob="0.937" d_score="1.00"/>
            <acceptor a_prob="0.959" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="36440" g_stop="36387" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="855" r_stop="908" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="13">
          <gDNA_intron_boundary i_start="36386" i_stop="36294" i_length="93">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.952" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="14">
          <gDNA_exon_boundary g_start="36293" g_stop="35955" g_length="339"/>
          <reference_exon_boundary r_type="cDNA" r_start="909" r_stop="1248" r_length="340" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C12HBa0011D12.1" gen_strand="-" ref_id="SGN-M7236" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1247</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C12HBa0011D12.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M7236" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="41613" e_stop="41598"/>
          <exon e_start="41515" e_stop="41440"/>
          <exon e_start="41228" e_stop="41161"/>
          <exon e_start="40388" e_stop="40265"/>
          <exon e_start="40083" e_stop="39997"/>
          <exon e_start="39270" e_stop="39202"/>
          <exon e_start="39118" e_stop="38982"/>
          <exon e_start="38285" e_stop="38204"/>
          <exon e_start="38081" e_stop="38061"/>
          <exon e_start="37892" e_stop="37830"/>
          <exon e_start="36853" e_stop="36806"/>
          <exon e_start="36673" e_stop="36611"/>
          <exon e_start="36440" e_stop="36387"/>
          <exon e_start="36293" e_stop="35955"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTTCTGATGTGCTGGTAGTGTTCTTAAGACCTTTCTTAATCTGTGTATTATGCTCACATGCGAAATAAAACATTGAAGTTTTTTACTTACTTGCAGTCTTAGTCTTCCGATTTTCCCTCTTGCTGCTTTTCTTGTCGAGAAAATGGCACAGAAGAAGTATATGACTGAACATGTAAGTCAGAATAACCTCTTCGTTCTTCACTTCCTCTTTTTGATAATTCTTCCATATCAATTAAATGTCACTGCTCAGACATGGACCAGTCACAGTGTTCAAGAAGGTATACACCAGAATAATTCTGGCTCTCATGACTTGTCTGAACTCGTGTTACCTTTTATTGTTTGACTTTATGTCCAGCCAGTAACTTTTCTAACTGATCCTGCAGGTAGTTGTCACTCTTCACATAATTATAACGACAGCTTCCATTTTGTATCCAGTTCTGGTCATCCTCAGGTTTGTTCTCATACGAGGTCATGGAACTTTGATATATACATCCTCCTAAGAAGTTGCTAAGTGAGCCTTCACTGGCGGGATGTCTCTCAGTGTGTGTTGTAAAATTGAGGCGATGTTATGGTAGAACTGGTGAATTTAAATGTCAACGGTGCACTATTATCTGGGTTGTAGTAGTCGTGCTTATGAACTAATTTTAATTTCTAATTTGGATTTTCGTCAACAGATCATCTTTGAACATTAACCTGTTGCATTTTGGATTGTAACGGAACTTTATGGTTGAATTAGATTAAGAAATTAGAGAAGTAGTAAAAGAAAATTAGTCGTTTATCTGAATTAGAAATTTGTTGCATGCCACTATGTCCATATGGACAAGGGAACAAGTGAAACATTGCTAATTCAGAGTTTAAAGCCATATTTGAACTTAAATTCACATGGTTTATACTTCATCTATTTCAACGAATTGCAGTTTTTATTCTTTCGTCCATATAAGGATAGTTTATGTGGAATTATTATTTGTGCACTACGTGTATATGTTTTTATTTTTTCTTCGTTGCTCTTTTCTTCTCTATAGACAGTGGTTGCCTAAGGTCTAACGGATGCTTCTTTTCAATGCCTTTTGCCTTTGATTACACTGGGTCGGATAGCTGCTTGTTCAAACTGTGTTGAAATTTAAGTTGAGAGGAGAGGATCTTCAATTATGTTTGCCAACTCTATTTTTTTGCTTATGTACATTGAAATATCTAGTGAGTCAGAGGTATTTTCAATTTCACAGGTGTGATTCTGCTTTTCTATCGGGTGTCACACTGATGATGTTTGCTTGCATTGTGTGGATGAAACTAGTTTCTTATGCACATACAAATTATGATATGAGACAGCTTGCAAAGTCTGTGAATGAGGTATGACTAGTTTATTTCTTTGTCATGGATCCACATCTGATCTTGATTAAGGCTTCTCCTGAAAATTTTCTAGACAAACCAACTTCTCTATTTAAGCTTCGGTACTCGTTCTGGTATTTTGGTCATCTGAGATAATGTTCTGAATATGGAGTCTCTCAGTTAAGTTTTTAAATGTTTTCAGGGTGAGAATTCCGAAATCAACTACTCTTACAATGTTAGTTTCGAGAGTTTGGCTTACTTCATGGTTGCTCCAACTTTATGCTATCAGGTAGGATCAGTTGACCTTTCTGAAGTTGTCAGTGACTTTCTTCCTTGGTAGAGTACTTACTACAAGTGCATTACAGCATCTGATGTTTCTCTAGATTCACCAAGATTTAATTAAATAACTCTGTTGAGCAATTTAGTTTGATTTTTGAAAAATTCCATTATCTTTTGTTTCCTGCCAAGTCTGCACAAATTTAAAGAGATTGTAGGTCTTTGATACTACTACCTTTTATGTGATTTTATTGCCAAGCATGTCCTTGCCTGAAGTATTCATATGCATGTTAAATGATGAAGCAATTGGACGTATGCGAAAAAGATTAAATTGGAGCACCAAATATTGATATGGTCGTTGGACAATTTTTTTCAGTCACGTGCTGATATTATTTTGGAGTAGTACTTTTATTATTGCGAACATGTGCAGATCCTGCTTACGTTTGGAAGTACTTGTATTTCATACTGTATAATACTTGAATGTGGTGTGGGCAGATTCAGTGGGGCTACAGTTGGTGAATACTACAACTGAGGCCCCTACGGTCCTTTTTCCCATGGATTGAAGTCAAATTCCTTTCATAGTAATAGGAAATCAAGTATCATCAGTCATCTAAAAATGAAAATTTCATGAAATTTTTTACCAACTCTCTTACTATTTGTTCCACCAACTCATTAGTTTTGGATATGTTTATTCTGTTATCTGAAGCTTAGCTATCCTCGCTCTGCATCCATTCGGAAGGGTTGGCTGGCCCGCCAACTCATCAAGCTGGTAATTTTTACAGGATTAATGGGATTTATCATTGAGCAGGTAAGTTCTCTTGAGCTTGACAGTTCAACGTGCCTTCACTCCTGTCAAAGTAAACTATATTAACTTTGAGCATCTTAATACAGTATATTAACCCGATTGTGCGAAGCTCACGACATCCATTTGAAGGAAACCTTTTATACGCCATCGAGAGGGTATTGAAGCTTTCAGTTCCAATTTTATATGTCTGGCTCTGCATGTTCTACAGCCTCTTTCATCTTTGGTATGTCCTCTATATATGATTTATAAATTTAGTATGCTTATGCATTTTATTTGTAGTTCATTGTCTTTCTTCCCATATTTTTGGATGTTCCAATCTTATTTGCGAGGTTTTTATACTTGATACTAAAACGAGTGTTAGGACATTCTTACTGTGTGTATTTTGTCATCATGCTTACCATTTTTTCATTTCAAATATGTTTAACTAAACAGTTTTGTGTCACTTATTAACCTTTAAAGTGCAAATCACATTATACTTGAAACTAGATTATCAAACTGCCATGAGTACTGAATTGAGGGGGCGAAAATTTGTAGAACCAGAAGGTGCAAAACTGGAGGTGCTTAATGAATCTGAGTGGTTTTAATTCAGTAAAATTATATTCCTCCTCGATATATCTATCCAAAGACCAACACATAGCTGGCAACTGTTAAATGCCGGAGCTGGAATTTGAATGGGTATACTGCAAGACTCTTGTGTTAGATTATGAAAAGGTTCACATTTCAGGATGAAACGCCAGGGACTTATTTTGTTTTAACTGAAAAACTACTAATATATCGATTATTTTCATATATGGATTATGTGTTCTAGCATTGCAACAGAATGAATTCTATTTACATAGTACATCTCTTTGTAGACTGAATATACTTGTGGATCTTACCGCAACAGAATAGCTCTATTTACATAATAATCACTCTGTAGGTTAAATATACTTGCGGAAGTTCTGCGATTTGGGGATCGTGAGTTCTATAAAGATTGGTGGAACGCAAAAACAATTGATGAGGTATATTAAAACATCATACTGTCTTGTTCTTTTTGTTTCTTCATCCCAACAATTTCAGAGCTTGCTAGAGTTTCTCATTTATTTCTTTTTTGTTGTTGCACCATTGTGGCTGCTGTTATCAGTATTGGAGACTTTGGAATATGGTATGTACTTCTTCCTTCTTTTTATGTCATTGCCGATTCTTATGCATGCAAATCATGTGTTTGTCTTCATTACCTAGAAGTGAAACTTTAATTAATATCGGCCTGGTTTAGTCTTTGTTGAACATTTTTTTGGACATTAAGTAACCCAAGTGTTGGTGACAACTGCAGCCTGTACATAAGTGGATGGTTCGTCACATCTATTTCCCATGCTTAAGAAATGGCATACCTAAGGTACTTTTGGAGTTCTCTCGTCCTAGTTTCTAATTTGTTTTTGAGCTATTTTTTGTCTGCTTACTTTCTAATCTTTTGTGCACTATTACAACAACTTACCAAGTATAATTCCAAAAGTGGGGTTTGGGTAGGGGGAGGTGTACACAACCCTTTGCCCCAACCCTTGAGGGGTAGAAAAAATGTTTCCGATAGACCCTCGATCGAGAACATGTCTGAAAGAATTGCAAAAGTAAAAAGCAATGATCAAAATAATGAAGAAAGAAAAGCAGCGACAATAAAATAGTGTAGATACCCAAAGTAAATGAATTAACTGTTACAATAATTGAAGGTTAAGATATTTATCCTTGTATGCTGAGGTTAAAATTTTATCTCACACAAACATACTGCTTTTCCTTTTCTTTTTTTTTCTTATATAACATAAGCACAATCATACTGCTCTTAACCATTAGCATACTTGTTGAAATTTGAAGAGAGAGAAAATAAAGAAGAAAGACAGCAAGGGACATACACACTTGCATATTGAAGAAACAAGCTTCGATGTGATTTTCAACACTTTAACTCGAGTGATCTTGCTAGATAATGAAATGCACTTCAAAGTAGAGCACATAAGCTATTCGTGCAGATAAGCTTTTGTGCGATTAATATCTTAATATACACGAGACATGGATGAAAAAGTTTTTTTCCTGATGAAGGTTAAAGTGCTATTAGTATTTATGTTTTGTGACAGAGAAGTGAGAACAGTATAATATACGATCAAATAAGTGTTTTTTGGGTCCACATTATACTTCATATCTTTCATGTCATTTATTTTTCAGTTTGAGTTTTAAGTGTATGCCTGGTATCAAGCACTAGTCGCTGCTTTGTATAGTTTTATCCGCTTTCTACTTTACAAAAGTTTTGGCCTTACTATTGTATACTAGATCTTATTTTGTGATCTGTTGAATTAGTTTTAATTGCCACTTGATTCTTGGTGCAGGGAGTTGCAATGGTGATCTCTTTCTTTATATCTGCTGTTTTCCATGAGGTATGTGGTTTTTGTTCCCTTCCATCATCCATTTTTAAACCAGGTGGCGTATATAAGCTTATAAAAACAAAAAACAATTACGTGTCAACAAAATGATTGGCTTTCGATGACATGTGGTATCGTTATCTTCAGCTGTGTATTGCTGTTCCTTGTCGGCTATTCAAGTTTTGGGCATTCCTTGGAATCATGTTTCAGGTAATGGATCATTCACGTGTGTGTAGTATATACAAGTATATGTATGATGGATATATATTCGGGGATAAGAAACGAGATGTAGTCATAAAATAGTGACACTGGAGCAAAGTTTATGTATCATCATTTGACAGTGTGAATATTGACATTTAGTGATGTTTCTCTCTGAGCAGATTCCCTTGGTCATACTAACGAACTTCCTGCAAAACAAGTTCAAAAACTCGAATGTATGTCTTTCCGCCTTGTTTTCATAAGCTTTCGATGATTTATTCTCTTTTTCGTGGGCATATCCATTGACAGTACGTCTCAACTTTTTTCAGGTGGGCAACATGACATTCTGGTGCTTTTTCTGCATTGTTGGTCAACCAATGTGTGTGCTTCTGTATTACCATGATGTGATGAATAGAAATGGTAGCTCAAGTTAAAGCTTCATCGTCGATCATTTTGTTGGACCGCGACTCACTAGTGAGTATCGCAGTTTTGAACTATCTGATGCTTTACTTATATGCTTGAAATGGAGAAAATTCTTTTCTAAAATTTGACACCAAGGA-ATTGAACAGAATTGTTGCTTTGTATTATATCTTTCTTTTGATATTTAAGAAATGTATATCATTTTTTGTTGAGGTAAAATGTAATAAGCTCAAATTAGTGATAGTGTT</genome_strand>
        <mrna_strand>CACTTCTGATGTGCTG..................................................................................TCTTAGTCTTCCGATTTTCCCTCTTGCTGCTTTTCTTGTCGAGAAAATGGCACAGAAGAAGTATATGACTGAACAT...................................................................................................................................................................................................................GTAGTTGTCACTCTTCACATAATTATAACGACAGCTTCCATTTTGTATCCAGTTCTGGTCATCCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGATTCTGCTTTTCTATCGGGTGTCACACTGATGATGTTTGCTTGCATTGTGTGGATGAAACTAGTTTCTTATGCACATACAAATTATGATATGAGACAGCTTGCAAAGTCTGTGAATGAG.....................................................................................................................................................................................GGTGAGAATTCCGAAATCAACTACTCTTACAATGTTAGTTTCGAGAGTTTGGCTTACTTCATGGTTGCTCCAACTTTATGCTATCAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTGGCTGGCCCGCCAACTCATCAAGCTGGTAATTTTTACAGGATTAATGGGATTTATCATTGAGCAG...................................................................................TATATTAACCCGATTGTGCGAAGCTCACGACATCCATTTGAAGGAAACCTTTTATACGCCATCGAGAGGGTATTGAAGCTTTCAGTTCCAATTTTATATGTCTGGCTCTGCATGTTCTACAGCCTCTTTCATCTTTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAATATACTTGCGGAAGTTCTGCGATTTGGGGATCGTGAGTTCTATAAAGATTGGTGGAACGCAAAAACAATTGATGAG..........................................................................................................................TATTGGAGACTTTGGAATATG........................................................................................................................................................................CCTGTACATAAGTGGATGGTTCGTCACATCTATTTCCCATGCTTAAGAAATGGCATACCTAAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGAGTTGCAATGGTGATCTCTTTCTTTATATCTGCTGTTTTCCATGAG....................................................................................................................................CTGTGTATTGCTGTTCCTTGTCGGCTATTCAAGTTTTGGGCATTCCTTGGAATCATGTTTCAG..........................................................................................................................................................................ATTCCCTTGGTCATACTAACGAACTTCCTGCAAAACAAGTTCAAAAACTCGAAT.............................................................................................GTGGGCAACATGACATTCTGGTGCTTTTTCTGCATTGTTGGTCAACCAATGTGTGTGCTTCTGTATTACCATGATGTGATGAATAGAAATGGTAGCTCAAGTTAAAGCTTCATCGTCGATCATTTTGTTGGACCGCGACTCACTAGTGAGTATCGCAGTTTTGAACTATCTGATGCTTTACTTATATGCTTGAAATGGAGAAAATTCTTTTCTAAAATTTGACACCAAGGAGAGTGAACAGAATTGTTGCTTTGTATTATATCTTTCTTTTGATATTTAAGAAATGTATATCGATTTTTGTTGAGGTAAAATGTCATAAGCTCAAATTAGTGATAGTGTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>1</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="41613" PGL_stop="35955"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="41613" e_stop="41598"/>
            <exon e_start="41515" e_stop="41440"/>
            <exon e_start="41228" e_stop="41161"/>
            <exon e_start="40388" e_stop="40265"/>
            <exon e_start="40083" e_stop="39997"/>
            <exon e_start="39270" e_stop="39202"/>
            <exon e_start="39118" e_stop="38982"/>
            <exon e_start="38285" e_stop="38204"/>
            <exon e_start="38081" e_stop="38061"/>
            <exon e_start="37892" e_stop="37830"/>
            <exon e_start="36853" e_stop="36806"/>
            <exon e_start="36673" e_stop="36611"/>
            <exon e_start="36440" e_stop="36387"/>
            <exon e_start="36293" e_stop="35955"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.825" acc_prob="0.969" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.906" e_score="1.000"/>
          <exon-intron don_prob="0.899" acc_prob="0.926" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.883" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.764" e_score="1.000"/>
          <exon-intron don_prob="0.989" acc_prob="0.669" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.215" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.545" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.099" e_score="1.000"/>
          <exon-intron don_prob="0.937" acc_prob="0.959" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.952" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="41613" e_stop="41598" e_length="16"/>
          </exon>
          <intron i_serial="1" don_prob="0.825" acc_prob="0.969">
            <gDNA_intron_boundary i_start="41597" i_stop="41516" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41515" e_stop="41440" e_length="76"/>
          </exon>
          <intron i_serial="2" don_prob="0.991" acc_prob="0.906">
            <gDNA_intron_boundary i_start="41439" i_stop="41229" i_length="211"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="41228" e_stop="41161" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.899" acc_prob="0.926">
            <gDNA_intron_boundary i_start="41160" i_stop="40389" i_length="772"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="40388" e_stop="40265" e_length="124"/>
          </exon>
          <intron i_serial="4" don_prob="0.991" acc_prob="0.761">
            <gDNA_intron_boundary i_start="40264" i_stop="40084" i_length="181"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="40083" e_stop="39997" e_length="87"/>
          </exon>
          <intron i_serial="5" don_prob="0.883" acc_prob="0.000">
            <gDNA_intron_boundary i_start="39996" i_stop="39271" i_length="726"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="39270" e_stop="39202" e_length="69"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.764">
            <gDNA_intron_boundary i_start="39201" i_stop="39119" i_length="83"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="39118" e_stop="38982" e_length="137"/>
          </exon>
          <intron i_serial="7" don_prob="0.989" acc_prob="0.669">
            <gDNA_intron_boundary i_start="38981" i_stop="38286" i_length="696"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="38285" e_stop="38204" e_length="82"/>
          </exon>
          <intron i_serial="8" don_prob="0.999" acc_prob="0.215">
            <gDNA_intron_boundary i_start="38203" i_stop="38082" i_length="122"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="38081" e_stop="38061" e_length="21"/>
          </exon>
          <intron i_serial="9" don_prob="0.999" acc_prob="0.545">
            <gDNA_intron_boundary i_start="38060" i_stop="37893" i_length="168"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="37892" e_stop="37830" e_length="63"/>
          </exon>
          <intron i_serial="10" don_prob="0.996" acc_prob="0.997">
            <gDNA_intron_boundary i_start="37829" i_stop="36854" i_length="976"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="36853" e_stop="36806" e_length="48"/>
          </exon>
          <intron i_serial="11" don_prob="0.991" acc_prob="0.099">
            <gDNA_intron_boundary i_start="36805" i_stop="36674" i_length="132"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="36673" e_stop="36611" e_length="63"/>
          </exon>
          <intron i_serial="12" don_prob="0.937" acc_prob="0.959">
            <gDNA_intron_boundary i_start="36610" i_stop="36441" i_length="170"/>
          </intron>
          <exon e_serial="13" e_score="1.000">
            <gDNA_exon_boundary e_start="36440" e_stop="36387" e_length="54"/>
          </exon>
          <intron i_serial="13" don_prob="0.997" acc_prob="0.952">
            <gDNA_intron_boundary i_start="36386" i_stop="36294" i_length="93"/>
          </intron>
          <exon e_serial="14" e_score="0.982">
            <gDNA_exon_boundary e_start="36293" e_stop="35955" e_length="339"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="41613" stop="41598"/>
              <exon start="41515" stop="41440"/>
              <exon start="41228" stop="41161"/>
              <exon start="40388" stop="40265"/>
              <exon start="40083" stop="39997"/>
              <exon start="39270" stop="39202"/>
              <exon start="39118" stop="38982"/>
              <exon start="38285" stop="38204"/>
              <exon start="38081" stop="38061"/>
              <exon start="37892" stop="37830"/>
              <exon start="36853" stop="36806"/>
              <exon start="36673" stop="36611"/>
              <exon start="36440" stop="36387"/>
              <exon start="36293" stop="35955"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M7236" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACTTCTGATGTGCTG : TCTTAGTCTTCCGATTTTCCCTCTTGCTGCTTTTCTTGTCGAGAAAATGGCACAGAAGAAGTATATGACTGAACAT : GTAGTTGTCACTCTTCACATAATTATAACGACAGCTTCCATTTTGTATCCAGTTCTGGTCATCCTCAG : GTGTGATTCTGCTTTTCTATCGGGTGTCACACTGATGATGTTTGCTTGCATTGTGTGGATGAAACTAGTTTCTTATGCACATACAAATTATGATATGAGACAGCTTGCAAAGTCTGTGAATGAG : GGTGAGAATTCCGAAATCAACTACTCTTACAATGTTAGTTTCGAGAGTTTGGCTTACTTCATGGTTGCTCCAACTTTATGCTATCAG : GGTTGGCTGGCCCGCCAACTCATCAAGCTGGTAATTTTTACAGGATTAATGGGATTTATCATTGAGCAG : TATATTAACCCGATTGTGCGAAGCTCACGACATCCATTTGAAGGAAACCTTTTATACGCCATCGAGAGGGTATTGAAGCTTTCAGTTCCAATTTTATATGTCTGGCTCTGCATGTTCTACAGCCTCTTTCATCTTTG : GTTAAATATACTTGCGGAAGTTCTGCGATTTGGGGATCGTGAGTTCTATAAAGATTGGTGGAACGCAAAAACAATTGATGAG : TATTGGAGACTTTGGAATATG : CCTGTACATAAGTGGATGGTTCGTCACATCTATTTCCCATGCTTAAGAAATGGCATACCTAAG : GGAGTTGCAATGGTGATCTCTTTCTTTATATCTGCTGTTTTCCATGAG : CTGTGTATTGCTGTTCCTTGTCGGCTATTCAAGTTTTGGGCATTCCTTGGAATCATGTTTCAG : ATTCCCTTGGTCATACTAACGAACTTCCTGCAAAACAAGTTCAAAAACTCGAAT : GTGGGCAACATGACATTCTGGTGCTTTTTCTGCATTGTTGGTCAACCAATGTGTGTGCTTCTGTATTACCATGATGTGATGAATAGAAATGGTAGCTCAAGTTAAAGCTTCATCGTCGATCATTTTGTTGGACCGCGACTCACTAGTGAGTATCGCAGTTTTGAACTATCTGATGCTTTACTTATATGCTTGAAATGGAGAAAATTCTTTTCTAAAATTTGACACCAAGGAATTGAACAGAATTGTTGCTTTGTATTATATCTTTCTTTTGATATTTAAGAAATGTATATCATTTTTTGTTGAGGTAAAATGTAATAAGCTCAAATTAGTGATAGTGTT</gDNA_template>
            <first_frame> H  F  *  C  A   : V  L  V  F  R  F  S  L  L  L  L  F  L  S  R  K  W  H  R  R  S  I  *  L  N  M :   *  L  S  L  F  T  *  L  *  R  Q  L  P  F  C  I  Q  F  W  S  S  S   : G  V  I  L  L  F  Y  R  V  S  H  *  *  C  L  L  A  L  C  G  *  N  *  F  L  M  H  I  Q  I  M  I  *  D  S  L  Q  S  L  *  M  R :   V  R  I  P  K  S  T  T  L  T  M  L  V  S  R  V  W  L  T  S  W  L  L  Q  L  Y  A  I  R :   V  G  W  P  A  N  S  S  S  W  *  F  L  Q  D  *  W  D  L  S  L  S  S :   I  L  T  R  L  C  E  A  H  D  I  H  L  K  E  T  F  Y  T  P  S  R  G  Y  *  S  F  Q  F  Q  F  Y  M  S  G  S  A  C  S  T  A  S  F  I  F   : G  *  I  Y  L  R  K  F  C  D  L  G  I  V  S  S  I  K  I  G  G  T  Q  K  Q  L  M  S :   I  G  D  F  G  I  C :   L  Y  I  S  G  W  F  V  T  S  I  S  H  A  *  E  M  A  Y  L  R :   E  L  Q  W  *  S  L  S  L  Y  L  L  F  S  M  S :   C  V  L  L  F  L  V  G  Y  S  S  F  G  H  S  L  E  S  C  F  R :   F  P  W  S  Y  *  R  T  S  C  K  T  S  S  K  T  R  M :   W  A  T  *  H  S  G  A  F  S  A  L  L  V  N  Q  C  V  C  F  C  I  T  M  M  *  *  I  E  M  V  A  Q  V  K  A  S  S  S  I  I  L  L  D  R  D  S  L  V  S  I  A  V  L  N  Y  L  M  L  Y  L  Y  A  *  N  G  E  N  S  F  L  K  F  D  T  K  E  L  N  R  I  V  A  L  Y  Y  I  F  L  L  I  F  K  K  C  I  S  F  F  V  E  V  K  C  N  K  L  K  L  V  I  V   </first_frame>
            <second_frame>  T  S  D  V  L  :  S  *  S  S  D  F  P  S  C  C  F  S  C  R  E  N  G  T  E  E  V  Y  D  *  T   : C  S  C  H  S  S  H  N  Y  N  D  S  F  H  F  V  S  S  S  G  H  P  Q  :  V  *  F  C  F  S  I  G  C  H  T  D  D  V  C  L  H  C  V  D  E  T  S  F  L  C  T  Y  K  L  *  Y  E  T  A  C  K  V  C  E  *   : G  *  E  F  R  N  Q  L  L  L  Q  C  *  F  R  E  F  G  L  L  H  G  C  S  N  F  M  L  S   : G  L  A  G  P  P  T  H  Q  A  G  N  F  Y  R  I  N  G  I  Y  H  *  A   : V  Y  *  P  D  C  A  K  L  T  T  S  I  *  R  K  P  F  I  R  H  R  E  G  I  E  A  F  S  S  N  F  I  C  L  A  L  H  V  L  Q  P  L  S  S  L  :  V  K  Y  T  C  G  S  S  A  I  W  G  S  *  V  L  *  R  L  V  E  R  K  N  N  *  *   : V  L  E  T  L  E  Y   : A  C  T  *  V  D  G  S  S  H  L  F  P  M  L  K  K  W  H  T  *   : G  S  C  N  G  D  L  F  L  Y  I  C  C  F  P  *   : A  V  Y  C  C  S  L  S  A  I  Q  V  L  G  I  P  W  N  H  V  S   : D  S  L  G  H  T  N  E  L  P  A  K  Q  V  Q  K  L  E   : C  G  Q  H  D  I  L  V  L  F  L  H  C  W  S  T  N  V  C  A  S  V  L  P  *  C  D  E  *  K  W  *  L  K  L  K  L  H  R  R  S  F  C  W  T  A  T  H  *  *  V  S  Q  F  *  T  I  *  C  F  T  Y  M  L  E  M  E  K  I  L  F  *  N  L  T  P  R  N  *  T  E  L  L  L  C  I  I  S  F  F  *  Y  L  R  N  V  Y  H  F  L  L  R  *  N  V  I  S  S  N  *  *  *  C  </second_frame>
            <third_frame>   L  L  M  C  C :   L  S  L  P  I  F  P  L  A  A  F  L  V  E  K  M  A  Q  K  K  Y  M  T  E  H  :  V  V  V  T  L  H  I  I  I  T  T  A  S  I  L  Y  P  V  L  V  I  L  R :   C  D  S  A  F  L  S  G  V  T  L  M  M  F  A  C  I  V  W  M  K  L  V  S  Y  A  H  T  N  Y  D  M  R  Q  L  A  K  S  V  N  E  :  G  E  N  S  E  I  N  Y  S  Y  N  V  S  F  E  S  L  A  Y  F  M  V  A  P  T  L  C  Y  Q  :  G  W  L  A  R  Q  L  I  K  L  V  I  F  T  G  L  M  G  F  I  I  E  Q  :  Y  I  N  P  I  V  R  S  S  R  H  P  F  E  G  N  L  L  Y  A  I  E  R  V  L  K  L  S  V  P  I  L  Y  V  W  L  C  M  F  Y  S  L  F  H  L  W :   L  N  I  L  A  E  V  L  R  F  G  D  R  E  F  Y  K  D  W  W  N  A  K  T  I  D  E  :  Y  W  R  L  W  N  M  :  P  V  H  K  W  M  V  R  H  I  Y  F  P  C  L  R  N  G  I  P  K  :  G  V  A  M  V  I  S  F  F  I  S  A  V  F  H  E  :  L  C  I  A  V  P  C  R  L  F  K  F  W  A  F  L  G  I  M  F  Q  :  I  P  L  V  I  L  T  N  F  L  Q  N  K  F  K  N  S  N  :  V  G  N  M  T  F  W  C  F  F  C  I  V  G  Q  P  M  C  V  L  L  Y  Y  H  D  V  M  N  R  N  G  S  S  S  *  S  F  I  V  D  H  F  V  G  P  R  L  T  S  E  Y  R  S  F  E  L  S  D  A  L  L  I  C  L  K  W  R  K  F  F  S  K  I  *  H  Q  G  I  E  Q  N  C  C  F  V  L  Y  L  S  F  D  I  *  E  M  Y  I  I  F  C  *  G  K  M  *  *  A  Q  I  S  D  S  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C12HBa0011D12.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="41611" stop="41598"/>
                    <exon start="41515" stop="41440"/>
                    <exon start="41228" stop="41161"/>
                    <exon start="40388" stop="40265"/>
                    <exon start="40083" stop="39997"/>
                    <exon start="39270" stop="39202"/>
                    <exon start="39118" stop="38982"/>
                    <exon start="38285" stop="38204"/>
                    <exon start="38081" stop="38061"/>
                    <exon start="37892" stop="37830"/>
                    <exon start="36853" stop="36806"/>
                    <exon start="36673" stop="36611"/>
                    <exon start="36440" stop="36387"/>
                    <exon start="36293" stop="36189"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1008</number_coding_nucleotides>
                  <number_encoded_amino_acids>336</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LLMCCLSLPIFPLAAFLVEKMAQKKYMTEHVVVTLHIIITTASILYPVLVILRCDSAFLSGVTLMMFACIVWMKLVSYAHTNYDMRQLAKSVNEGENSEINYSYNVSFESLAYFMVAPTLCYQGWLARQLIKLVIFTGLMGFIIEQYINPIVRSSRHPFEGNLLYAIERVLKLSVPILYVWLCMFYSLFHLWLNILAEVLRFGDREFYKDWWNAKTIDEYWRLWNMPVHKWMVRHIYFPCLRNGIPKGVAMVISFFISAVFHELCIAVPCRLFKFWAFLGIMFQIPLVILTNFLQNKFKNSNVGNMTFWCFFCIVGQPMCVLLYYHDVMNRNGSSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 9 chains have been computed
$ 
$ memory statistics:
$ 2920 bytes spliced alignments in total
$ 1 spliced alignments have been stored
$ 2920 bytes was the average size of a spliced alignment
$ 5944 bytes predicted gene locations in total
$ 1 predicted gene locations have been stored
$ 5944 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 9 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 08:47:58
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