<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-07 06:49:30"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U345380" ref_strand="+" ref_description="SGN-U345380        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | protein kinase family protein, contains Pfam profile: PF00069 Eukaryotic protein kinase domain | chr5:26198319-26201223 REVERSE | Aliases: K19O4.3, K19O4_3(evalue: 1e-58, score=223) genbank/nr: gi|15238488|ref|NP_201353.1| protein kinase family [Arabidopsis thaliana](evalue: 9e-57, score=223)">
      <seq>ttcttaagtaatatgaggcatcctcatatgctatcgatgatcggatattgctctgagctaaggtgcatcgtgttcgagtatatgcacaatggttgcttaagagacattctcttctcaggcaccagaggctctaaaaggagaaataagggcctaaactggcaagcaaggatatgtattgtagccaatgtttgtacaggcttgtgcttcctccatcgtgccaagccacggcccgtggctcatggcaacctgaacccttcaaaaatccttcttgatcataacaatatggcgaaaatccatggtgttaggacacctctgtcatgtgacaaatcggatatgagatcagatatccgggcttatggtaacttagtcttacagattctgactggaagaaactgggcggggttggttgaggaggcgattatgatggaccagagtaagcttattgaagtgcttgatcggat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="1" stop="1053"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="293" g_stop="753" g_length="461"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="461" r_length="461" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U345380" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>461</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345380" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="293" e_stop="753"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCTTAAGTAATATGAGGCATCCTCATATGCTATCGATGATCGGATATTGCTCTGAGCTAAGGTGCATCGTGTTCGAGTATATGCACAATGGTTGCTTAAGAGACATTCTCTTCTCAGGCACCAGAGGCTCTAAAAGGAGGAATAAGGGCCTAAACTGGCAAGCTAGGATATGTATTGTAGCCAATGTCTGTACTGGCTTGTGCTTCCTCCATCATGCCAAGCCAACGCCCGTGGCTCATGGCAACCTGAACCCTTCAAAAATCCTTCTTGATCATAACTATATGGCGAAAATCCATGGTGTTAGGACACCTCTGTCATGTGACAGATCGAATATGAGATCAGATATCCGGGCTTATGGGAACTTAGTCTTACAGATTCTGACTGGAAGAAACTGGGCGGGGTTGGTTGAGGAGGCGATTATGATGGACCAGAGTAAGCTTATTGAAGTGCTTGATCCGAT</genome_strand>
        <mrna_strand>TTCTTAAGTAATATGAGGCATCCTCATATGCTATCGATGATCGGATATTGCTCTGAGCTAAGGTGCATCGTGTTCGAGTATATGCACAATGGTTGCTTAAGAGACATTCTCTTCTCAGGCACCAGAGGCTCTAAAAGGAGAAATAAGGGCCTAAACTGGCAAGCAAGGATATGTATTGTAGCCAATGTTTGTACAGGCTTGTGCTTCCTCCATCGTGCCAAGCCACGGCCCGTGGCTCATGGCAACCTGAACCCTTCAAAAATCCTTCTTGATCATAACAATATGGCGAAAATCCATGGTGTTAGGACACCTCTGTCATGTGACAAATCGGATATGAGATCAGATATCCGGGCTTATGGTAACTTAGTCTTACAGATTCTGACTGGAAGAAACTGGGCGGGGTTGGTTGAGGAGGCGATTATGATGGACCAGAGTAAGCTTATTGAAGTGCTTGATCGGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U338195" ref_strand="+" ref_description="SGN-U338195        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|15144505|gb|AAK84472.1| unknown [Lycopersicon esculentum](evalue: 1e-17, score=94.4)">
      <seq>aatcggccgaataaattattccgtaattttatccgaacccttgcacctttcctgattctcgtttttaatcacaagatcgtaacactattccaaatttcccaatcaaaatgtgttacggcggtcaacgattaccgtcaaaagacgacttaaccgacccgacccgacggacccgaactttaccggcggcgaacgagaacgcagtggtggttgaaaatcttcgggaccggttagctgagacggaggcgcggctggaacgagctagggctcgggaagcggagctgagccggcagctggaagagatgaagaggtacgtctgcgttatggaaattctggaatgttacctcaagcgccgatacagggaacagcaagttagaaccctagcagtggtaaattcgaagtaaagatgatttttatgtggttaaaatggattattagggtttcgtgatttatgtaatcatgtgtgttgtaattgtatattcttcagtgtgatatagaattgttaatctattgaacttgaaatactcttcaattttattgttctacgtgttaagcttgatgttaatctggattagaaatttcaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="16472" stop="15298"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16180" g_stop="15598" g_length="583"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="584" r_length="584" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="588" polyA_stop="638"/>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U338195" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>583</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U338195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16180" e_stop="15598"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAT-TTTAAAATAAATTATTCCGTAATTTTATCCGAACCCTTGCACCTTTCCTGATTCTCGTTTTTAATCACAAGATCGTAACACTATTCCAAATTTCCCAATCAAAATGTGTTACGGCGGTCAACGATTACCGTCAAAAGACGACTTAACCGACCCGACCCGACGGACCCGAACTTTACCGGCGGCGAACGAGAACGCAGTGGTGGTTGAAAATCTTCGGGACCGGTTAGCTGAGACGGAGGCGCGGCTGGAACGAGCTAGGGCTCGGGAAGCGGAGCTGAGCCGGCAGCTGGAAGAGATGAAGAGGTACGTCTGCGTTATGGAAATTCTGGAATGTTACCTCAAGCGCCGATACAGGGAACAGCAAGTTAGAACCCTAGCAGTGGTAAATTCGAAGTAAAGATGATTTTTATGTGGTTAAAATGGATTATTAGGGTTTCGTGATTTATGTAATCATGTGTGTTGTAATTGTATATTCTTCAGTGTGATATAGAATTGTTAATCTATTGAACTTGAAATACTCTTCAATTTTATTGTTCTACGTGTTAAGCTTGATGTTAATCTGGATTAGAAATTTCAAATA</genome_strand>
        <mrna_strand>AATCGGCCGAATAAATTATTCCGTAATTTTATCCGAACCCTTGCACCTTTCCTGATTCTCGTTTTTAATCACAAGATCGTAACACTATTCCAAATTTCCCAATCAAAATGTGTTACGGCGGTCAACGATTACCGTCAAAAGACGACTTAACCGACCCGACCCGACGGACCCGAACTTTACCGGCGGCGAACGAGAACGCAGTGGTGGTTGAAAATCTTCGGGACCGGTTAGCTGAGACGGAGGCGCGGCTGGAACGAGCTAGGGCTCGGGAAGCGGAGCTGAGCCGGCAGCTGGAAGAGATGAAGAGGTACGTCTGCGTTATGGAAATTCTGGAATGTTACCTCAAGCGCCGATACAGGGAACAGCAAGTTAGAACCCTAGCAGTGGTAAATTCGAAGTAAAGATGATTTTTATGTGGTTAAAATGGATTATTAGGGTTTCGTGATTTATGTAATCATGTGTGTTGTAATTGTATATTCTTCAGTGTGATATAGAATTGTTAATCTATTGAACTTGAAATACTCTTCAATTTTATTGTTCTACGTGTTAAGCTTGATGTTAATCTGGATTAGAAATTTCAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U325344" ref_strand="+" ref_description="SGN-U325344        Tomato 200607 #1 [4 ESTs aligned] genbank/nr: gi|15144505|gb|AAK84472.1| unknown [Lycopersicon esculentum](evalue: 2e-18, score=94.4)">
      <seq>caagatcgtaacactattccaaatttcccaatcaaaatgtgttacggcggtcaacgattaccgtcaaaagacgacttaaccgacccgacccgacggacccgaactttaccggcggcgaacgagaacgcagtggtggttgaaaatcttcgggaccggttagctgagacggaggcgcggctggaacgagctagggctcgggaagcggagctgagccggcagctggaagagatgaagaggtacgtctgcgttatggaaattctggaatgttacctcaagcgccgatacagggaacagcaagttagaaccctagcagtggtaaattcgaagtaaagatgatttttatgtggttaaaatggattattagggtttcgtgatttatgtaatcatgtgtgttgtaattgtatattcttcagtgtgatatagaattgttaatctattgaacttgaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="16410" stop="15361"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16110" g_stop="15664" g_length="447"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="447" r_length="447" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="448" polyA_stop="494"/>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U325344" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>447</cumulative_length_of_scored_exons>
        <coverage percentage="0.905" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U325344" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16110" e_stop="15664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGATCGTAACACTATTCCAAATTTCCCAATCAAAATGTGTTACGGCGGTCAACGATTACCGTCAAAAGACGACTTAACCGACCCGACCCGACGGACCCGAACTTTACCGGCGGCGAACGAGAACGCAGTGGTGGTTGAAAATCTTCGGGACCGGTTAGCTGAGACGGAGGCGCGGCTGGAACGAGCTAGGGCTCGGGAAGCGGAGCTGAGCCGGCAGCTGGAAGAGATGAAGAGGTACGTCTGCGTTATGGAAATTCTGGAATGTTACCTCAAGCGCCGATACAGGGAACAGCAAGTTAGAACCCTAGCAGTGGTAAATTCGAAGTAAAGATGATTTTTATGTGGTTAAAATGGATTATTAGGGTTTCGTGATTTATGTAATCATGTGTGTTGTAATTGTATATTCTTCAGTGTGATATAGAATTGTTAATCTATTGAACTTGAA</genome_strand>
        <mrna_strand>CAAGATCGTAACACTATTCCAAATTTCCCAATCAAAATGTGTTACGGCGGTCAACGATTACCGTCAAAAGACGACTTAACCGACCCGACCCGACGGACCCGAACTTTACCGGCGGCGAACGAGAACGCAGTGGTGGTTGAAAATCTTCGGGACCGGTTAGCTGAGACGGAGGCGCGGCTGGAACGAGCTAGGGCTCGGGAAGCGGAGCTGAGCCGGCAGCTGGAAGAGATGAAGAGGTACGTCTGCGTTATGGAAATTCTGGAATGTTACCTCAAGCGCCGATACAGGGAACAGCAAGTTAGAACCCTAGCAGTGGTAAATTCGAAGTAAAGATGATTTTTATGTGGTTAAAATGGATTATTAGGGTTTCGTGATTTATGTAATCATGTGTGTTGTAATTGTATATTCTTCAGTGTGATATAGAATTGTTAATCTATTGAACTTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U331291" ref_strand="+" ref_description="SGN-U331291        Tomato 200607 #1 [2 ESTs aligned]">
      <seq>tttttttttttttttttttttttttttttttttttttttttggggaaatttaacacataacattgagattggtactagtgtacaaacaaacacgccttgttacttcctaataacacaaatatttgtagataaaattacgtacaataaatcttagtgattcagtcctatctcgaatccgtgaaatgtactgaaatttccttagtaactcaaactttttcccaaatgacctcccatttttcttcacaataataacccctcttcatttgatcattgctactaccaaaatacctaaaattatgactattatctccatcttgtttatcacaaatgacatagtcatagaacacaaccccactaataattatggctacaatatgaataggaagaccagcccaaaatccaaaaaatggataaaattgataaacaaacccaaaaataatggaagaatacaagaaccatatagcaaatcccaacaagctcttctcaaaagacttatttttcgattgaatgtttcgatatgtagatgataagttatttgccaagtaagcactaaaatatatgaaaaagatgaaagctaagaacgaatattgactgttagaatatgctcgatatattgtagcaataaaattgaatatgatcaataaggtttgaacacattgtaatgtgaatgatgtagagtttgtcatggatatagttggagttcttcttttacaactagtttgtgtatacattaagtggggttttggtatttttttgtgtgtcaattcggccgattggccgccaattcgcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="96183" stop="22417"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23867" g_stop="23832" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="36" r_length="36" r_score="0.611"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23831" i_stop="23442" i_length="390">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23441" g_stop="22712" g_length="730"/>
          <reference_exon_boundary r_type="cDNA" r_start="37" r_stop="766" r_length="730" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U331291" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>766</cumulative_length_of_scored_exons>
        <coverage percentage="0.970" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U331291" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23867" e_stop="23832"/>
          <exon e_start="23441" e_stop="22712"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTTATATCTACTTCTGTTACTAAATGTTTTTTTTGTTTTCTCACATAAGTTCATGTGTTTGCGTTAATAAATCAAAGTTATAATGTATATTAATTAATTTACTACATTCAAAATTCACGTGATCGCATACTCTTTTTTATTAGAAATAATATTAAAAATTATGATTTATGAATTTATCCTCAATTTATTATCTCATATGTTATTGGGTTCAATAAACCTATACCTAATATTGTAGCTATTGCTCCCTACTTTGGAAAGTTCAAATTAGCTTTGTCATTGTTTTTTGAAAATAATTTAATTAATTTCTATTTTAGCTTAATTAACTCATTTGATTTTTTTTAGTTAATATATAATTATTGCATTTGAAGAGCTTTAATTTGGATTCGTTTACAAACTCACATATAATTTGTCTTTCTCAAACTGATTTTTGGGGAAATTTAACACATAACATTGAGATTGGTACTAGTGTACAAACAAACACGCCTTGTTACTTCCTAATAACACAAATATTTGTAGATAAAATTACGTACAATAAATCTTAGTGATTCAGTCCTATCTCGAATCCGTGAAATGTACTGAAATTTCCTTAGTAACTCAAACTTTTTCCCAAATGACCTCCCATTTTTCTTCACAATAATAACCCCTCTTCATTTGATCATTGCTACTACCAAAATACCTAAAATTATGACTATTATCTCCATCTTGTTTATCACAAATGACATAGTCATAGAACACAACCCCACTAATAATTATGGCTACAATATGAATAGGAAGACCAGCCCAAAATCCAAAAAATGGATAAAATTGATAAACAAACCCAAAAATAATGGAAGAATACAAGAACCATATAGCAAATCCCAACAAGCTCTTCTCAAAAGACTTATTTTTCGATTGAATGTTTCGATATGTAGATGATAAGTTATTTGCCAAGTAAGCACTAAAATATATGAAAAAGATGAAAGCTAAGAACGAATATTGACTGTTAGAATATGCTCGATATATTGTAGCAATAAAATTGAATATGATCAATAAGGTTTGAACACATTGTAATGTGAATGATGTAGAGTTTGTCATGGATATAGTTGGAGTTCTTCTTTTACAACTAGTTTGTGTATACATTAAGTGGGGTTTTATTATTTTTTTGTGTGTGTGTT</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT......................................................................................................................................................................................................................................................................................................................................................................................................TTTTTGGGGAAATTTAACACATAACATTGAGATTGGTACTAGTGTACAAACAAACACGCCTTGTTACTTCCTAATAACACAAATATTTGTAGATAAAATTACGTACAATAAATCTTAGTGATTCAGTCCTATCTCGAATCCGTGAAATGTACTGAAATTTCCTTAGTAACTCAAACTTTTTCCCAAATGACCTCCCATTTTTCTTCACAATAATAACCCCTCTTCATTTGATCATTGCTACTACCAAAATACCTAAAATTATGACTATTATCTCCATCTTGTTTATCACAAATGACATAGTCATAGAACACAACCCCACTAATAATTATGGCTACAATATGAATAGGAAGACCAGCCCAAAATCCAAAAAATGGATAAAATTGATAAACAAACCCAAAAATAATGGAAGAATACAAGAACCATATAGCAAATCCCAACAAGCTCTTCTCAAAAGACTTATTTTTCGATTGAATGTTTCGATATGTAGATGATAAGTTATTTGCCAAGTAAGCACTAAAATATATGAAAAAGATGAAAGCTAAGAACGAATATTGACTGTTAGAATATGCTCGATATATTGTAGCAATAAAATTGAATATGATCAATAAGGTTTGAACACATTGTAATGTGAATGATGTAGAGTTTGTCATGGATATAGTTGGAGTTCTTCTTTTACAACTAGTTTGTGTATACATTAAGTGGGGTTTTGGTATTTTTTTGTGTGTCAATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U327481" ref_strand="+" ref_description="SGN-U327481        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, similar to unknown protein (dbj BAA75199.1) | chr5:26194728-26197542 REVERSE | Aliases: K19O4.5, K19O4_5(evalue: 2e-110, score=395) genbank/nr: gi|15144507|gb|AAK84474.1| suppressor-like protein [Lycopersicon esculentum](evalue: 0, score=707)">
      <seq>gcacagttggtgcagcagacatttcaggcgccgaaatgttatccggctttgccacccaggagtgatgtgggtgcttatatggaagctgagctgggaatgaagattgcttgtggatttgagatgatttatcagttgaaaaagaggcagggcatggacggaaaagggagtacatgggatgcgtttaggctgagtctagagcggagtgggtacttcgaagggctgttaccaggatcgaaggagtataaaagattgatgaagaatgctgaggagtattacaagaatagttcactgcatgcaagagaaagtgctacactaagtgctccagtgcgaagaatagatgagatccttgcccttcctgattctgctgatgactttaaggatcaggagataccgccatctgatgatgattcatggctttatggtggagaggatgagctaaattccgttcttcaagagaggcaaaaggagatggaactttacaattcaaaaaggaaacagaaatcaaaagagcaggatgggcccagcaatcattctgataattttgatctaaaagatatatcgaactctatgcaagcatttgtcacaaaagtggccagttatgaaggtgcagaggttccagaggacaggaatgtaaaggaagtggactttgatgtcgatcactttatgaaagacctggaatcgtttatgaggggtcagggcaatgaagacattggccgtgatgttgatattgaagaagggtcatcatcagatatggagttcgatgaatctgaagatgagagtgatattgccgagccacatgatgataatgatgagggaggtgctgctttcatgcattcgtattcggacactctgaatgatgaactgaaaggcaccacactaagtaatacctttgtccgcgcaaatggagagtctgagtccataaagaaagatgagggaacatctactgctgcagaaaacatggaagaggaggatttcagtcctgtagatgttgatttcaatcttgtaaagaatttcctggattcgttttcttctcaagatggacttccaggacctgcttctaacttgcttggacttatgggtctacagctaccaccagatgctagcaaagggaaataaccatattatacacaaacttgtttcctcattcttcttttccttgcctttttctaaacggcaatctttacaatactatgtattacgtatgttttaacttcaaacggagaaaaaaggaggaggtggatttatgtggtatttttcatttttgaccatcnaataatttatatattgataaattatgtaaaaaatatttataggtgacgaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="26576" stop="30339"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26876" g_stop="27180" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="27181" i_stop="28050" i_length="870">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28051" g_stop="28371" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="626" r_length="321" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28372" i_stop="28796" i_length="425">
            <donor d_prob="0.886" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="28797" g_stop="28930" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="627" r_stop="760" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="28931" i_stop="29287" i_length="357">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="29288" g_stop="29460" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="761" r_stop="933" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="29461" i_stop="29650" i_length="190">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="29651" g_stop="30038" g_length="388"/>
          <reference_exon_boundary r_type="cDNA" r_start="934" r_stop="1321" r_length="388" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1322" polyA_stop="1338"/>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U327481" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1321</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327481" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26876" e_stop="27180"/>
          <exon e_start="28051" e_stop="28371"/>
          <exon e_start="28797" e_stop="28930"/>
          <exon e_start="29288" e_stop="29460"/>
          <exon e_start="29651" e_stop="30038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCACAGTTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCCAGGAGTGATGTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATTTATCAGTTGAAAAAGAGGCAGGGCATGGACGGAAAAGGGAGTACATGGGATGCGTTTAGGCTGAGTCTAGAGCGGAGTGGGTACTTCGAAGGGCTGTTACCAGGATCGAAGGAGTATAAAAGATTGATGAAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCAAGAGAAAGGTATCTATTGTATTAGTTTGTATAAAAGTCACGTTTCTTTGTAAAATTTTAGATGATCCACACTGATGACAGATTAGAATTTGGTACAACGGGATTAGATATCTGGAAATTTGGTGTATATATGTCTAATTACTTCCCTGCCTTGGGGGAAGGGTGTATGCACTGGCTTGTTTCAATGATACTATTGTTAAGTAACAAAAACAAAAAAAGTTGGTGACATCGTTAGAGCATCACTAATGATATCTGTAGATTGATTAAACTTTTTCTTAGTGTTCCTATCATCAGGATAATTTCTGCATATCGGGTAAAATATGAGCATTGCATTATCAGGATCTATATGGTGCCATTTGCAGCTTCACGAGTCCTAGGCTAAAAAGTTTCTTGGGTGTGTCTGTTTAGTTATATTTCTCGATGATTCGAAATCTTATGACTGTCCATCCCTGAATTATCAATAATGAGGTCAAGTTGTTGTTTACTTCCCCATGTGTCCTAGATGTCAAAAGGAAATTTGAAGCTTCTATATAGCAGAATTTGTGTATACGTACTGTATTCTATGAACCTTGTGCCTTATTTATTGAAAAAGAAAAAAACTGGAACTGGATTTTGTAGAGATCTGAATCTCCTAGAGAAGTTGTTAGTCTTTGAATATTTGTTTCTTGCCTTACTGAAAGGAAAGCTTGAAATTCTATGAAGTGACATGGTCATATTGTTTACTGTAATGATACTTTATATTCTCTGCTTGATTCACTGTTCTCTCCTCTTACTGCTCAATATACTGATAGTACTGTTTTTATGATTCTTGTCTGAGACGTTCTTGTGTGTCATAAGTATACCTTAACCTGCTACTAACCAATATTGAAAAAAAAACAGTGCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGATTCTGCTGATGACTTTAAGGATCAGGAGATACCGCCATCTGATGATGATTCATGGCTTTATGGTGGAGAGGATGAGCTAAATTCCGTTCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCAAAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATCATTCTGATAATTTTGATCTAAAAGATATATCGAACTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGTGCAGAGGTTCCAGAGGACAGGTTTTTGTGCTTCATTTCTCTCATTTCAACACATGAAGTGGCATATGCTTGGTTTCTTTTATCTTATTTTTACTGATGAGAGGTTACATTGTAGTATCCTATAGTTATACTTTGGGTTGGTCTTTTTTGTATGTATTCTGGTGTGCAAGGGTAAAGTTAGATCAGATAGTTAGCAAGAGATTTTGTCATCAATTTCATCATAAATATTAAGTTCCTTGTCAAATAGATATGAAGTCACCTACGAGGGTGGTTTGAGTAAGTGATTTCCAAATGGGGGATCACAGGTTCAAAACAACCTGCATGCCTTTTTGGTTGAGTTTGTCACACGGGGCTTGCCTAGGGCTGTTAACCTTTTCAGTGTGGTTTGTGGGCTATTACATTGAAGCGAGCTAGTAACTTATTTTGGCCTATCCTGTCTCCTATAGGAATGTAAAGGAAGTGGACTTTGATGTCGATCACTTTATGAAAGACCTGGAATCGTTTATGAGGGGTCAGGGCAATGAAGACATTGGCCGTGATGTTGATATTGAAGAAGGGTCATCATCAGATATGGAGTTCGGTGAGTGAGATTTTTTTAATTTCTTCAAGTCAATCTTTTTGGTAACACTAGTAAAATTTTATATATTAACTTTACATGCAGATTAGAATTTGTCACTTATTTGTACCATCAGTGGCTCTATGCCAATGGAAATTCCTAGTCTAGATTGATATCTCAGAGCTTTTGGTTTATCTTTCAATTTTTCCAACCACTATTTGGTTGCTTTTGTTCCATTCTTTTTTGGGGTGAGGGGTTATGCTTAAAATTATAACATGTTCGCACATCACAAGGAAAAAAAAATCATCTACATGTCCTCCCCCTCCCTCTTTTAAAAGAACGCCGAGTAAGAAGCAAAACTGACATCTACTGCACATGCAGATGAATCTGAAGATGAGAGTGATATTGCCGAGCCACATGATGATAATGATGAGGGAGGTGCTGCTTTCATGCATTCGTATTCGGACACTCTGAATGATGAACTGAAAGGCACCACACTAAGTAATACCTTTGTCCGCGCAAATGGAGAGTCTGAGTCCATAAAGAAAGATGAGGTTAGTCTACACTTATTCCTGCTATACTAAATTTACAGTTGATTCATTTGTCCCAAACGAATAGAGAATGTGGCTTGTTGCTTGATATGCCCCGCTATGTCACGAAACATGGAAACTGTTATGGTTCGTTGCATTTGTATTTACGTCCTATGTTGCTACGTCCACTCATTGAAGCAAATATATGTATCAGGGAACATCTACTGCTGCAGAAAACATGGAAGAGGAGGATTTCAGTCCTGTAGATGTTGATTTCAATCTTGTAAAGAATTTCCTGGATTCGTTTTCTTCTCAAGATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCAGATGCTAGCAAAGGGAAATAACCATATTATACACAAACTTGTTTCCTCATTCTTCTTTTCCTTGCCTTTTTCTAAACGGCAATCTTTACAATACTATGTATTACGTATGTTTTAACTTCAAACGGAGAAAAAAGGAGGAGGTGGATTTATGTGGTATTTTTCATTTTTGACCATCAAATAATTTATATATTGATAAATTATGTAAAAAATATTATAAGTTGACGAA</genome_strand>
        <mrna_strand>GCACAGTTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCCAGGAGTGATGTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATTTATCAGTTGAAAAAGAGGCAGGGCATGGACGGAAAAGGGAGTACATGGGATGCGTTTAGGCTGAGTCTAGAGCGGAGTGGGTACTTCGAAGGGCTGTTACCAGGATCGAAGGAGTATAAAAGATTGATGAAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCAAGAGAAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGATTCTGCTGATGACTTTAAGGATCAGGAGATACCGCCATCTGATGATGATTCATGGCTTTATGGTGGAGAGGATGAGCTAAATTCCGTTCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCAAAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATCATTCTGATAATTTTGATCTAAAAGATATATCGAACTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGTGCAGAGGTTCCAGAGGACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................GAATGTAAAGGAAGTGGACTTTGATGTCGATCACTTTATGAAAGACCTGGAATCGTTTATGAGGGGTCAGGGCAATGAAGACATTGGCCGTGATGTTGATATTGAAGAAGGGTCATCATCAGATATGGAGTTCG.....................................................................................................................................................................................................................................................................................................................................................................ATGAATCTGAAGATGAGAGTGATATTGCCGAGCCACATGATGATAATGATGAGGGAGGTGCTGCTTTCATGCATTCGTATTCGGACACTCTGAATGATGAACTGAAAGGCACCACACTAAGTAATACCTTTGTCCGCGCAAATGGAGAGTCTGAGTCCATAAAGAAAGATGAG..............................................................................................................................................................................................GGAACATCTACTGCTGCAGAAAACATGGAAGAGGAGGATTTCAGTCCTGTAGATGTTGATTTCAATCTTGTAAAGAATTTCCTGGATTCGTTTTCTTCTCAAGATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCAGATGCTAGCAAAGGGAAATAACCATATTATACACAAACTTGTTTCCTCATTCTTCTTTTCCTTGCCTTTTTCTAAACGGCAATCTTTACAATACTATGTATTACGTATGTTTTAACTTCAAACGGAGAAAAAAGGAGGAGGTGGATTTATGTGGTATTTTTCATTTTTGACCATCNAATAATTTATATATTGATAAATTATGTAAAAAATATTTATAGGTGACGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U323214" ref_strand="+" ref_description="SGN-U323214        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | isochorismatase hydrolase family protein, contains Pfam profile PF00857: isochorismatase family protein | chr2:9596518-9597959 REVERSE | Aliases: F14M13.1(evalue: 4e-87, score=318) genbank/nr: gi|15144508|gb|AAK84475.1| unknown [Lycopersicon esculentum](evalue: 1e-113, score=412)">
      <seq>tgggaacagtggggcaagaggctgcgattgacttactgaagagtgagattccggcggaggaagatgaaccgctgcttctcaccggcgatgttaacaccggtctcgtactcgtcgacatcgttaatggcttctgcaccgtcggagctggcaatttggctccggtgacaccaaatagacaaatttcagcaatggttgatgagtcagttaaacttgcaaaagtgttctgtgagaagaaatggcctatttatgcacttcgtgattcgcatcatcctgatgtgcctgagccacctaatcctcctcattgtatcgctggaacagatgaatctgagttggttcctgcactgcagtggttggagaatgaacctaatgtgacagtgcgatgcaaggattgtattgatggtttccttggctcgattgagaaagatggatctaatgtctttgtaaattgggtgaaagctaatgagattaaaattatattggttgtagggatatgcacggacatatgcgtgcttgattttgtgtgttctgtcttatctgcacgaaaccgtggatttctctccccactgaaagacgtgattgtatattcccctggctgcgctacctatgatcttccagtccagattgccagaaatataaaaggagctttacctcatccacaggaattcatgcatcacataggcctttacatggccaaaggaagaggagcaaaagtagtttcacatatctcatttgacacgacaaccaacgagacataactttgaacaatgagattaagatccatatttctcattcgaaactctgaaggacactgctacagctattgcagacactgcttagtatatattaagttatagtagtaagataaatatgccccatatgcatcttctcttgttcagttgggtgtgcagcttaacttctcttgttcaaaaactactaatacttctaccatattggaataaactatcccgtttttggatgcccaataaatttgtcaataaacaacttttgattggtccaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="30370" stop="33177"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30670" g_stop="30824" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30825" i_stop="31717" i_length="893">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31718" g_stop="31901" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="339" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31902" i_stop="31981" i_length="80">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31982" g_stop="32115" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="473" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32116" i_stop="32203" i_length="88">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="0.852" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32204" g_stop="32389" g_length="186"/>
          <reference_exon_boundary r_type="cDNA" r_start="474" r_stop="659" r_length="186" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="32390" i_stop="32525" i_length="136">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="32526" g_stop="32870" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="660" r_stop="1007" r_length="348" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U323214" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>1004</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U323214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30670" e_stop="30824"/>
          <exon e_start="31718" e_stop="31901"/>
          <exon e_start="31982" e_stop="32115"/>
          <exon e_start="32204" e_stop="32389"/>
          <exon e_start="32526" e_stop="32870"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGAACAGTGGGGCAAGAGGCTGCGATTGACTTACTGAAGAGTGAGATTCCGGCGGAGGAAGATGAACCGCTGCTTCTCACCGGCGATGTTAACACCGGTCTCGTACTCGTCGACATCGTTAATGGCTTCTGCACCGTCGGAGCTGGCAATTTGGTAAATTTATAATCACAATCATTTAATTTAAGTTTTAAGTTCATATTGATGTGTATACTTTTCTGTATTTATAGGAAATAGACTGCACAAAAAAACAAATAACGAATTTAGACGAATCTGTATATTACATCCGTCGTATTCTGTTTGGATCGATCTATTTGTGAAGGAAATACTTCGAAATTCATAATTATATGATATATGTGGTCAATTTGCATGCATCTCGACTATGATCGGTATTCACCAAAGTGAAAACATTAAAAATTCATACTTTTCCTTCTCAACCAAAAAAAGAGGAAGAAGGAAATACTTTGAAATTCCTAGTTTAAGCATTTGGATATAAAAATTGTGAATTTTTTTTTTCAAAGTTGAAAATGGTGTATTTGGAAACTGGAGTTGTGTTTGTACATGTGTACAAATTGGAATTTTTTTTTATTTTTTGTTAGTGATTTTAAGCAAAAAAAAATATGTGAAAACTACCTTTTCGGAGTTTTCCAAATACTGGAAAATTCCAAAATTTATCTTAAAACAATTCTATATCCAAACAGTTTTTCGGAAATAAGTGAATATTATTTGCATACAAGTGTGCTTCGAAAAATCATCTTTGTTTTTCTTAATTCAATGTAATTTCTTGGGATTCAGGATTCACAGGGTAGATAATCTAGTGTGATAATCGAACCTTGCACTCCAGTAAGGAGCTTCATTCAATCTATGTTATCTTTTTTGAGTTGTTTTGTTCTCTCTCTCTTTCTATTAGTATGTTGTTCTAATGTTTGTTTTTCGACTATTTTTGTGACTATAGTGGATAACTCGTTAGTTTCGCTAAGCAATTCATGTGATTCTTATTCCTCATATATCAGTTAGATTGTGATTTTGTGCCATTTGTTTTGCTATAGGCTCCGGTGACACCAAATAGACAAATTTCAGCAATGGTTGATGAGTCAGTTAAACTTGCAAAAGTGTTCTGTGAGAAGAAATGGCCTATTTATGCACTTCGTGATTCGCATCATCCTGATGTGCCTGAGCCACCTAATCCTCCTCATTGTATCGCTGGAACAGATGAATCTGAGTTGGTTCCTGGTTAGTATTTCCTTCATGTTTTTTCTCCTTTCAGGTTAAAAGTGAGTTTTGTGAATGTGGTCTTTTATCATCATTTGCAGCACTGCAGTGGTTGGAGAATGAACCTAATGTGACAGTGCGATGCAAGGATTGTATTGATGGTTTCCTTGGCTCGATTGAGAAAGATGGATCTAATGTCTTTGTAAATTGGGTGAAAGCTAATGAGATTAAAATTGTAAGTATCGCCATATTTCATAATTTAATCAAAATTTGTTTCCATTCCAATTCTATCTGATGTTGTGAGTATCAATATGTTGGTTTAGATATTGGTTGTAGGGATATGCACGGACATATGCGTGCTTGATTTTGTGTGTTCTGTCTTATCTGCACGAAACCGTGGATTTCTCTCCCCACTGAAAGACGTGATTGTATATTCCCCTGGCTGCGCTACCTATGATCTTCCAGTCCAGATTGCCAGAAATATAAAAGGAGCTTTACCTCATCCACAGGTGAGCTGATAAGTATATACACATGCATTTGGGCTGTTAGCCATAAAAACTTGATCCTCAGATACTCTTCTTTTTCACGGGAACAAATCTCGAATGTCTTTTGACAATTTCACCATTCCCATCATTTGCTATGTAGGAATTCATGCATCACATAGGCCTTTACATGGCCAAAGGAAGAGGAGCAAAAGTAGTTTCACATATCTCATTTGACACGACAACCAACGAGACATAACTTTGAACAATGAGATTAAGATCCATATTTCTCATTCGAAACTCTGAAGGACACTGCTACAGCTATTGCAGACACTGCTTAGTATATATTAAGTTATAGTAGTAAGATAAATATG-CCCATATGCATCTTCTCTTGTTCAGTTGGCTGTGCAGC-TAACTTCTCTTGTTCCAAAACTACTAATACTTCTACCATATTGTAATAAACTATCACG-TTTTGGATGCCAAATAAATTTGTCTATAGACAACTTTG</genome_strand>
        <mrna_strand>TGGGAACAGTGGGGCAAGAGGCTGCGATTGACTTACTGAAGAGTGAGATTCCGGCGGAGGAAGATGAACCGCTGCTTCTCACCGGCGATGTTAACACCGGTCTCGTACTCGTCGACATCGTTAATGGCTTCTGCACCGTCGGAGCTGGCAATTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGGTGACACCAAATAGACAAATTTCAGCAATGGTTGATGAGTCAGTTAAACTTGCAAAAGTGTTCTGTGAGAAGAAATGGCCTATTTATGCACTTCGTGATTCGCATCATCCTGATGTGCCTGAGCCACCTAATCCTCCTCATTGTATCGCTGGAACAGATGAATCTGAGTTGGTTCCTG................................................................................CACTGCAGTGGTTGGAGAATGAACCTAATGTGACAGTGCGATGCAAGGATTGTATTGATGGTTTCCTTGGCTCGATTGAGAAAGATGGATCTAATGTCTTTGTAAATTGGGTGAAAGCTAATGAGATTAAAATT........................................................................................ATATTGGTTGTAGGGATATGCACGGACATATGCGTGCTTGATTTTGTGTGTTCTGTCTTATCTGCACGAAACCGTGGATTTCTCTCCCCACTGAAAGACGTGATTGTATATTCCCCTGGCTGCGCTACCTATGATCTTCCAGTCCAGATTGCCAGAAATATAAAAGGAGCTTTACCTCATCCACAG........................................................................................................................................GAATTCATGCATCACATAGGCCTTTACATGGCCAAAGGAAGAGGAGCAAAAGTAGTTTCACATATCTCATTTGACACGACAACCAACGAGACATAACTTTGAACAATGAGATTAAGATCCATATTTCTCATTCGAAACTCTGAAGGACACTGCTACAGCTATTGCAGACACTGCTTAGTATATATTAAGTTATAGTAGTAAGATAAATATGCCCCATATGCATCTTCTCTTGTTCAGTTGGGTGTGCAGCTTAACTTCTCTTGTTCAAAAACTACTAATACTTCTACCATATTGGAATAAACTATCCCGTTTTTGGATGCCCAATAAATTTGTCAATAAACAACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U337801" ref_strand="+" ref_description="SGN-U337801        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | isochorismatase hydrolase family protein, contains Pfam profile PF00857: isochorismatase family protein | chr2:9596518-9597959 REVERSE | Aliases: F14M13.1(evalue: 4e-66, score=248) genbank/nr: gi|15144508|gb|AAK84475.1| unknown [Lycopersicon esculentum](evalue: 2e-99, score=365)">
      <seq>aacagtggggcaagaggctgcgattgacttactgaagagtgagattccggcggaggaagatgaaccggtgcttctcaccggcgatgttaacaccggtctcgtactcgtcgacatcattaatggcttctgcaccgtcggagctggcaatttggctccggtgacaccaaatagacaaatttcaacaatggttgatgagtcagctaaacttgcaaaagtgttctgtgagaagaaatggcctatttatgcacttcgagattcgcatcatactgatgtgcctgagccacctaatcctcctcattggatcgctggaacaaatgaatcttaattggttcctgcactgcagaggttggagaatgaacctaatgtgacagcgcgatgccaggattgtattgatggttttcttggctcacttgaaaaagacggatctaatgtctttgcaaattgtgtgacagctaatgagatgacaattatattggttgtatggatatgcacggacatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="30374" stop="32535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30674" g_stop="30824" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="151" r_length="151" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30825" i_stop="31717" i_length="893">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31718" g_stop="31901" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="152" r_stop="335" r_length="184" r_score="0.957"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="31902" i_stop="31981" i_length="80">
            <donor d_prob="0.998" d_score="0.92"/>
            <acceptor a_prob="0.998" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="31982" g_stop="32115" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="469" r_length="134" r_score="0.903"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="32116" i_stop="32203" i_length="88">
            <donor d_prob="0.928" d_score="0.88"/>
            <acceptor a_prob="0.852" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="32204" g_stop="32235" g_length="32"/>
          <reference_exon_boundary r_type="cDNA" r_start="470" r_stop="501" r_length="32" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U337801" ref_strand="+">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U337801" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30674" e_stop="30824"/>
          <exon e_start="31718" e_stop="31901"/>
          <exon e_start="31982" e_stop="32115"/>
          <exon e_start="32204" e_stop="32235"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAGTGGGGCAAGAGGCTGCGATTGACTTACTGAAGAGTGAGATTCCGGCGGAGGAAGATGAACCGCTGCTTCTCACCGGCGATGTTAACACCGGTCTCGTACTCGTCGACATCGTTAATGGCTTCTGCACCGTCGGAGCTGGCAATTTGGTAAATTTATAATCACAATCATTTAATTTAAGTTTTAAGTTCATATTGATGTGTATACTTTTCTGTATTTATAGGAAATAGACTGCACAAAAAAACAAATAACGAATTTAGACGAATCTGTATATTACATCCGTCGTATTCTGTTTGGATCGATCTATTTGTGAAGGAAATACTTCGAAATTCATAATTATATGATATATGTGGTCAATTTGCATGCATCTCGACTATGATCGGTATTCACCAAAGTGAAAACATTAAAAATTCATACTTTTCCTTCTCAACCAAAAAAAGAGGAAGAAGGAAATACTTTGAAATTCCTAGTTTAAGCATTTGGATATAAAAATTGTGAATTTTTTTTTTCAAAGTTGAAAATGGTGTATTTGGAAACTGGAGTTGTGTTTGTACATGTGTACAAATTGGAATTTTTTTTTATTTTTTGTTAGTGATTTTAAGCAAAAAAAAATATGTGAAAACTACCTTTTCGGAGTTTTCCAAATACTGGAAAATTCCAAAATTTATCTTAAAACAATTCTATATCCAAACAGTTTTTCGGAAATAAGTGAATATTATTTGCATACAAGTGTGCTTCGAAAAATCATCTTTGTTTTTCTTAATTCAATGTAATTTCTTGGGATTCAGGATTCACAGGGTAGATAATCTAGTGTGATAATCGAACCTTGCACTCCAGTAAGGAGCTTCATTCAATCTATGTTATCTTTTTTGAGTTGTTTTGTTCTCTCTCTCTTTCTATTAGTATGTTGTTCTAATGTTTGTTTTTCGACTATTTTTGTGACTATAGTGGATAACTCGTTAGTTTCGCTAAGCAATTCATGTGATTCTTATTCCTCATATATCAGTTAGATTGTGATTTTGTGCCATTTGTTTTGCTATAGGCTCCGGTGACACCAAATAGACAAATTTCAGCAATGGTTGATGAGTCAGTTAAACTTGCAAAAGTGTTCTGTGAGAAGAAATGGCCTATTTATGCACTTCGTGATTCGCATCATCCTGATGTGCCTGAGCCACCTAATCCTCCTCATTGTATCGCTGGAACAGATGAATCTGAGTTGGTTCCTGGTTAGTATTTCCTTCATGTTTTTTCTCCTTTCAGGTTAAAAGTGAGTTTTGTGAATGTGGTCTTTTATCATCATTTGCAGCACTGCAGTGGTTGGAGAATGAACCTAATGTGACAGTGCGATGCAAGGATTGTATTGATGGTTTCCTTGGCTCGATTGAGAAAGATGGATCTAATGTCTTTGTAAATTGGGTGAAAGCTAATGAGATTAAAATTGTAAGTATCGCCATATTTCATAATTTAATCAAAATTTGTTTCCATTCCAATTCTATCTGATGTTGTGAGTATCAATATGTTGGTTTAGATATTGGTTGTAGGGATATGCACGGACATATG</genome_strand>
        <mrna_strand>AACAGTGGGGCAAGAGGCTGCGATTGACTTACTGAAGAGTGAGATTCCGGCGGAGGAAGATGAACCGGTGCTTCTCACCGGCGATGTTAACACCGGTCTCGTACTCGTCGACATCATTAATGGCTTCTGCACCGTCGGAGCTGGCAATTTG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCCGGTGACACCAAATAGACAAATTTCAACAATGGTTGATGAGTCAGCTAAACTTGCAAAAGTGTTCTGTGAGAAGAAATGGCCTATTTATGCACTTCGAGATTCGCATCATACTGATGTGCCTGAGCCACCTAATCCTCCTCATTGGATCGCTGGAACAAATGAATCTTAATTGGTTCCTG................................................................................CACTGCAGAGGTTGGAGAATGAACCTAATGTGACAGCGCGATGCCAGGATTGTATTGATGGTTTTCTTGGCTCACTTGAAAAAGACGGATCTAATGTCTTTGCAAATTGTGTGACAGCTAATGAGATGACAATT........................................................................................ATATTGGTTGTATGGATATGCACGGACATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U336818" ref_strand="-" ref_description="SGN-U336818        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>cacaaatcaatgtcacctttaaactttaaaactgatcaacttctgttgttgtggggaaaacttgacatatcaagctgattttttagtgtaaatatagctaatgtgaatatgggagaagtagtatgctttttaactgctgctattgtaaataaatcatctgtcttccaatatccagacaagtgaaaacatcattgtttatatctttgatcatacattaatgttaaatattatgttcttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="43708" stop="38092"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="43408" g_stop="43172" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.992"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="43171" i_stop="42654" i_length="518">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.538" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="42653" g_stop="42633" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="258" r_length="21" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U336818" ref_strand="-">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>258</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U336818" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="43408" e_stop="43172"/>
          <exon e_start="42653" e_stop="42633"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAATCAATGTCATCTTTAAACTTTAGAACTGATCAACTTCTGTTGTTGTGGGGAAAACTTGACATATCAAGCTGATTTTTTAGTGTAAATATAGCTAATGTGAATATGGGAGAAGTAGTATGCTTTTTAACTGCTGCTATTGTAAATAAATCATCTGTCTTCCAATATCCAGACAAGTGAAAACATCATTGTTTATATCTTTGATCATACATTAATGTTAAATATTATGTTCTTATGAATCTATTCTGTTATGGTTCCCTCTGTCTTATTGTTCATTATTGTTTATTATGTATATATACTAGATGTTGATACCCCTTCATTTCTTCGTGGGTTCTGGCTCCTATGCTGACCAAGAACCCTCTATGTTTGTGGACCACCGCACATCGTTTGCTTCGTTAGTACACTATTGTAGAAGCTAGTGAAAATAGTCGTCATTTTTTCCTTTACTAGGAAGGTTATTCTTCTGTAAGCAAGATCTTTGATTAGTTTTTCTTTCTACAAGACTTATCTTAACTTGTCGAACTTTCTTTCCTTCACTAGGAAAGTTACTCCGTAAGCAAGATGTTTGATTACAATGAGTTACGAAAGACAAGTGGATTTGTTGATTGCTCAACTCAAAGCCAAGAAAACCCTAAAAAAGATGAATTTGGACCATTTGTGTTGTTGTATTGATTCAAAACCCCTTTTAAACACACATTGATTCCAACACTTGATGTTTTTGCAAGAATGGCATGTGACCATTGCTACTATAGGTTGAAAAGTGAAAAAAAAAA</genome_strand>
        <mrna_strand>CACAAATCAATGTCACCTTTAAACTTTAAAACTGATCAACTTCTGTTGTTGTGGGGAAAACTTGACATATCAAGCTGATTTTTTAGTGTAAATATAGCTAATGTGAATATGGGAGAAGTAGTATGCTTTTTAACTGCTGCTATTGTAAATAAATCATCTGTCTTCCAATATCCAGACAAGTGAAAACATCATTGTTTATATCTTTGATCATACATTAATGTTAAATATTATGTTCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U319439" ref_strand="+" ref_description="SGN-U319439        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr4:17873003-17874801 REVERSE | Aliases: None(evalue: 2e-23, score=107) genbank/nr: gi|15144509|gb|AAK84476.1| unknown [Lycopersicon esculentum](evalue: 1e-79, score=300)">
      <seq>tgtgtgttacttttgggggggtggggtgaagacgaaagaagggagttttagtgagagagagaaaaaggggttcaccgccggtggcggaaaatggatatgccggtgaacagttttgtttttttccggtgatattaccgtgctgatctcactttccggcgaggatttgagaattttccggtggtgacaccgtttgatatatatacacacatctgccgaaagcttatcctttttctttactgagaaacaaattcgggtctgggtttgacccgattggagaaatggtttttggtgttttaattccaattttgccctcatcaatcacgagtttgagatgaaaaacttgatttaaattttgtggatttatcatattgttagacccttttgaactgtttgatgttttctgggatttttagttgaattttagtgctaggagatggtggggttttaatttttgaagcttttcttgaaaaggggttgtttttttatgattaaactgctgaaagctgtttgcttttttgctcttttgatagaaaaagtttgtctttagccttccatctgatattttgttttagtaatggattaagcatttgttgaatttttgttctggggcttggatttgagttcttgattgtgtttcagagcttaaagtttgatttttttttgctaagtttgatcatttgtagaatcccttttggatgaaatggcagtttctttgactcgtttgtcatggtggtggtggggtgggaaagagaaggaaccagtgtctaatggatcttcaatgaatcccttgcaagattttggatttggattgaaggaacaaagtgatagtttgaagtttaagtcagtgaggggggctaatctagcttcaactactaggaaagtgaagaggaaatggaagagtagagaggagaggaagagggttgatgagaaatatgatgtggtattggtgccatctgatggtgtttgtttatcaggttccgaatccgatgactctgactggtcgatcgggtggctggaaccacatgcccctgatttccagaatgatgatgagggagatgacagttttgctgtgttggttccttgctacaggcatgattgtagagagataggagagccaaacaatcagtttttaagtgccattgagaatctctcaaatgggtatcctgctgagggtaagaagtatatggagcaatggctctcttctcttcagaatttttgaatatactgcagctggtcgttatctacgcattaggaattttctgaagcagggtctatcttttagtatttgaggagatatgctagttctgcatcaatatcgaaaagtagtggcagcaggtcagcattttcatttgcgagagacaaataatcaagtttttcgtggcagtgatctttggtttcgggctcaaatacacaaatcaatgtcatctttaaactttagaactgatcaacttctgttgttgtggggaaaacttgacatatcaagctgattttttagtgtaaatatagctaatgtgaatatgggagaagtagtatgctttttaactgctgctattgtaaataaatcatctgtcttccaatatccagacaagtgaaaacatcattgtttatatctttgatcatacattaatgttaaatattatgttcttatgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="46557" stop="42867"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46257" g_stop="45091" g_length="1167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1169" r_length="1169" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="45090" i_stop="43649" i_length="1442">
            <donor d_prob="0.000" d_score="0.61"/>
            <acceptor a_prob="0.960" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43648" g_stop="43167" g_length="482"/>
          <reference_exon_boundary r_type="cDNA" r_start="1170" r_stop="1651" r_length="482" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U319439" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>1649</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319439" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46257" e_stop="45091"/>
          <exon e_start="43648" e_stop="43167"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTGTGTTACTTTTGGGGGGGTGGGGTGAAGACGAAAGAAGGGAGTTTTAGTGAGAGAGAGAAAAAGG-GTTCACCGCCGGTGGCGGAAAATGGATATGCCGGTGAACAGTTTTGTTTTTTTCCGGTGATATTACCGTGCTGATCTCACTTTCCGGCGAGGATTTGAGAATTTTCCGGTGGTGACACCGTTTGATATATATACACACATCTGCCGAAAGCTTATCCTTTTTCTTTACTGAGAAACAAATTCGGGTCTGGGTTTGACCCGATTGGAGAAATGGTTTTTGGTGTTTTAATTCCAATTTTGCCCTCATCAATCACGAGTTTGAGATGAAAAACTTGATTTAAATTTTGTGGATTTATCATATTGTTAGACCCTTTTGAACTGTTTGATGTTTTCTGGGATTTTTAGTTGAATTTTAGTGCTAGGAGATGGTGGGGTTTTAATTTTTGAAGCTTTTCTTGAAAAGGGGTTGTTTTTTTATGATTAAACTGCTGAAAGCTGTTTGCTTTTTTGCTCTTTTGATAGAAAAAGTTTGTCTTTAGCCTTCCATCTGATATTTTGTTTTAGTAATGGATTAAGCATTTGTTGAATTTTTGTTCTGGGGCTTGGATTTGAGTTCTTGATTGTGTTTCAGAGCTTAAAGTTTGATTTTTTTTTGCTAAGTTTGATCATTTGTAGAATCCCTTTTGGATGAAATGGCAGTTTCTTTGACTCGTTTGTCATGGTGGTGGTGGGGTGGGAAAGAGAAGGAACCAGTGTCTAATGGATCTTCAATGAATCCCTTGCAAGATTTTGGATTTGGATTGAAGGAACAAAGTGATAGTTTGAAGTTTAAGTCAGTGAGGGGGGCTAATCTAGCTTCAACTACTAGGAAAGTGAAGAGGAAATGGAAGAGTAGAGAGGAGAGGAAGAGGGTTGATGAGAAATATGATGTGGTATTGGTGCCATCTGATGGTGTTTGTTTATCAGGTTCCGAATCCGATGACTCTGACTGGTCGATCGGGTGGCTGGAACCACATGCCCCTGATTTCCAGAATGATGATGAGGGAGATGACAGTTTTGCTGTGTTGGTTCCTTGCTACAGGCATGATTGTAGAGAGATAGGAGAGCCAAACATTCTGTGTGTTTGTGCCATTGTTATCCTTTGAAATACCAATCGTG-TGGTTGCGAGCGTCACATTATGTTTTGTTGCTTTTGCTGCATTGATTATGTAGAATCTCTTTCGTTTGGATTATTGTTCTTTGATTACTATGATTTGAATTTGATTATGCTTGTTTGCAATTGCTCTGACAATAATGATTCCTCTGGAGCTGAATTTGTTAAATTAGTTATGTTTAATAATGTGTAGACTGAGAAAAAGATTCATGTGCGTTTGTCGTATTGTTATCCTTCGTTTTACCAAGCGTGTGGTAGCAAGCGTCACATTATGTTCTTGTTGCTTTTGCTGCATTGATTATGTAGAATATTGTTTTTTGGATAATTGTTCTTTGATAACTATGATTTGAATTTCATTATGCTTGTTTGCAACTGCTCTGACAATAATGACACCTCTGGAGCTGAATTTGTTAAATTAGTTATGTTTAATAATGTATAGACTGTGAAAAAGATTCATGTGAGTTTGTCGTATTGTTATCCTTCGTGTTACCAAGCGAGTGGCAACAAGCGTCGCATTATGTTCTTGTTGCTTTTGCTGCATTGATTATGTAGAATATCATTCTTTTGGATTATTGTTCTTTGATAACTATGATTTGAATTTCTTTATGCTTGTTTGCAACTGCTCTGACAATTATGACACCTCTGGAGCTGAATTTAACAATTAGTTATGTTTAGTAATGTGTAGACTGAGAAAAAGATTCATGTGAGTTTGTCGTATTGTTATCCTTCGTGTTACCAAGCGCGTGGTAACAAGCGTCGCATAATAGTGCTAAAAATAGAAGCCAGTCTCCCATCAGGACACAGATGGATAGAGTAATATCATTGGATTTAGATTTTAATAAGCAATAGTTGCATTGAAGGATAGATACTATTAATGGAGTAGAATTAATGAGCAATATTTACTGTTATCGTACTACAATCAGTGAACATTATTTACATATCCGTTGTTGTGTATTTTGAGCCGAGGGTGTTTCAGAAACAGCCTCTCTTCACAAGGTAGGGGTAACCTTGCGGACACTCTAGCCTCCTCAGACCCCACTTGTGGGATTTCTATGAGTATGGTGTTGTATTATTGTGCAATTTGACAATAAGAACCTCAATAAAATTTCATTCTAACCTAATGCAGTGAGTTCTACATACTCCATCTTGGTGATGTTATATCCTTTCAATCCAGCCTTTTGGTTCTTAAAGAAAGCTTAAACATTGATAGAGCAATGAACAAAGAACTGACTTTTCCTTTTATTTTGAATGCTATTGTTTCTTCCTGTATGAAGTTTCCAAACTTACGACTTGTATTTGCCTTGAACCAATTTAAAGCCTGCAGAATTTGTTATGAGTTCGTCTAGATAGGTTGGTTAATATGTATCATATCTATGCCAGTCTGTGTTGTCTCGTATTAGACGTACGAGTGAATGTGATCTTGTCTGAAATTCTTCTTTCATACTTGCAGAGGGTAAGAAGTATATGGAGCAATGGCTCTCTTCTCTTCAGAATTTTTGAATATACTGCAGCTGGTCGTTATCTACGCATTAGGAATTTTCTGAAGCAGGGTCTATCTTTTAGTATTTGAGGAGATATGCTAGTTCTGCATCAATATCGAAAAGTAGTGGCAGCAGGTCAGCATTTTCATTTGCGAGAGACAAATAATCAAGTTTTTCGTGGCAGTGATCTTTGGTTTCGGGCTCAAATACACAAATCAATGTCATCTTTAAACTTTAGAACTGATCAACTTCTGTTGTTGTGGGGAAAACTTGACATATCAAGCTGATTTTTTAGTGTAAATATAGCTAATGTGAATATGGGAGAAGTAGTATGCTTTTTAACTGCTGCTATTGTAAATAAATCATCTGTCTTCCAATATCCAGACAAGTGAAAACATCATTGTTTATATCTTTGATCATACATTAATGTTAAATATTATGTTCTTATGAA</genome_strand>
        <mrna_strand>TGTGTGTTACTTTTGGGGGGGTGGGGTGAAGACGAAAGAAGGGAGTTTTAGTGAGAGAGAGAAAAAGGGGTTCACCGCCGGTGGCGGAAAATGGATATGCCGGTGAACAGTTTTGTTTTTTTCCGGTGATATTACCGTGCTGATCTCACTTTCCGGCGAGGATTTGAGAATTTTCCGGTGGTGACACCGTTTGATATATATACACACATCTGCCGAAAGCTTATCCTTTTTCTTTACTGAGAAACAAATTCGGGTCTGGGTTTGACCCGATTGGAGAAATGGTTTTTGGTGTTTTAATTCCAATTTTGCCCTCATCAATCACGAGTTTGAGATGAAAAACTTGATTTAAATTTTGTGGATTTATCATATTGTTAGACCCTTTTGAACTGTTTGATGTTTTCTGGGATTTTTAGTTGAATTTTAGTGCTAGGAGATGGTGGGGTTTTAATTTTTGAAGCTTTTCTTGAAAAGGGGTTGTTTTTTTATGATTAAACTGCTGAAAGCTGTTTGCTTTTTTGCTCTTTTGATAGAAAAAGTTTGTCTTTAGCCTTCCATCTGATATTTTGTTTTAGTAATGGATTAAGCATTTGTTGAATTTTTGTTCTGGGGCTTGGATTTGAGTTCTTGATTGTGTTTCAGAGCTTAAAGTTTGATTTTTTTTTGCTAAGTTTGATCATTTGTAGAATCCCTTTTGGATGAAATGGCAGTTTCTTTGACTCGTTTGTCATGGTGGTGGTGGGGTGGGAAAGAGAAGGAACCAGTGTCTAATGGATCTTCAATGAATCCCTTGCAAGATTTTGGATTTGGATTGAAGGAACAAAGTGATAGTTTGAAGTTTAAGTCAGTGAGGGGGGCTAATCTAGCTTCAACTACTAGGAAAGTGAAGAGGAAATGGAAGAGTAGAGAGGAGAGGAAGAGGGTTGATGAGAAATATGATGTGGTATTGGTGCCATCTGATGGTGTTTGTTTATCAGGTTCCGAATCCGATGACTCTGACTGGTCGATCGGGTGGCTGGAACCACATGCCCCTGATTTCCAGAATGATGATGAGGGAGATGACAGTTTTGCTGTGTTGGTTCCTTGCTACAGGCATGATTGTAGAGAGATAGGAGAGCCAAACAATCAGTTTTTAAGTGCCATTGAGAATCTCTCAAATGGGTATCCTGCTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGGTAAGAAGTATATGGAGCAATGGCTCTCTTCTCTTCAGAATTTTTGAATATACTGCAGCTGGTCGTTATCTACGCATTAGGAATTTTCTGAAGCAGGGTCTATCTTTTAGTATTTGAGGAGATATGCTAGTTCTGCATCAATATCGAAAAGTAGTGGCAGCAGGTCAGCATTTTCATTTGCGAGAGACAAATAATCAAGTTTTTCGTGGCAGTGATCTTTGGTTTCGGGCTCAAATACACAAATCAATGTCATCTTTAAACTTTAGAACTGATCAACTTCTGTTGTTGTGGGGAAAACTTGACATATCAAGCTGATTTTTTAGTGTAAATATAGCTAATGTGAATATGGGAGAAGTAGTATGCTTTTTAACTGCTGCTATTGTAAATAAATCATCTGTCTTCCAATATCCAGACAAGTGAAAACATCATTGTTTATATCTTTGATCATACATTAATGTTAAATATTATGTTCTTATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U346550" ref_strand="+" ref_description="SGN-U346550        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein, contains Pfam profile PF00924: Mechanosensitive ion channel | chr1:21551852-21556750 REVERSE | Aliases: F16M22.2, F16M22_2(evalue: 4e-16, score=82) genbank/nr: gi|15144511|gb|AAK84478.1| unknown [Lycopersicon esculentum](evalue: 3e-61, score=230)">
      <seq>tttaccttgtttgtgcaaaccatcacacatacgatgtcgttttgaaggtttcttcctttctctgtattccgttagacaaggtttttttcaagagaagtagaggttgaggggggaatcatcactatccttgtttttgtaattaggaagacttttgatcaatgtggagtagtttaattatcttatgctgctagtgatagttggttgtttgcttagctttgtccaataatggttgctgctggttctttgcagttgtcccattattgggggacttgcaagaaccatgagcgccttaagaaatattcgcctatacagaacacacttggaaggaacaggtggcgttcttgttgcacaaatctgtcatctttttcatcacggcaggactcttggagtatccatcactcaagaggattgcaagtgaagaaacatgtgctcccatatagaagcaatttgttgaagtgtaattctttcctaaaacctgaccaagcttttgacatttctgtaaagaatgctgctattatactgaaaagatcatacaatagcttacaaggaagcccacatctgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="59730" stop="62404"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60030" g_stop="60109" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="80" r_length="80" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60110" i_stop="60416" i_length="307">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60417" g_stop="60648" g_length="232"/>
          <reference_exon_boundary r_type="cDNA" r_start="81" r_stop="312" r_length="232" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="60649" i_stop="61028" i_length="380">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="61029" g_stop="61088" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="313" r_stop="372" r_length="60" r_score="0.983"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61089" i_stop="61465" i_length="377">
            <donor d_prob="0.941" d_score="0.98"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="61466" g_stop="61620" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="373" r_stop="527" r_length="155" r_score="0.994"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="61621" i_stop="62069" i_length="449">
            <donor d_prob="0.966" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="62070" g_stop="62104" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="562" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U346550" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346550" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60030" e_stop="60109"/>
          <exon e_start="60417" e_stop="60648"/>
          <exon e_start="61029" e_stop="61088"/>
          <exon e_start="61466" e_stop="61620"/>
          <exon e_start="62070" e_stop="62104"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACCTTGTTCGTGCAAACCATCACACATACGATGTCGTTTTGAAGGTTTCTTCCTTTCTCTGTATTCCGTTAGACAAGGTTAGTTTCATCATCTTCATCTTCTTGGTAGTTTCCTGTATGTATTTTATTATTATTTTGAAAGTTGAGTTTTTTGGTTCAATGGCTTCAAATTGTCAATTTTCTGTATTTCTTTTTTCAGTTTTTATTGGAAATGGATTAGTAGAAATTTGAATTCTGTGAAAAAAGAAAATACCCATGTAAAAAGATTTGATTTTTCATTCAAATTCCAATTCTGGAGGCTGATTTTTAGGGTAGAATTAAGACTAGGGTTATATTAATGACTTAATTTCAATTCTGATGATGTTTTCGATTATGGGTTTTGCAGGTTTTTTTCAAGAGAAGTAGAGGTTGAGGGGGGAATCATCACTATCCTTGTTTTTGTAATTAGGAAGACTTTTGATCAATGTGGAGTAGTTTAATTATCTTATGCTGCTAGTGATAGTTGGTTGTTTGCTTAGCTTTGTCCAATAATGGTTGCTGCTGGTTCTTTGCAGTTGTCCCATTATTGGGGGACTTGCAAGAACCATGAGCGCCTTAAGAAATATTCGCCTATACAGGTACCTGTTCGACTTGGTTATATGTTTTATTTACATCACTAGTTCTTCTTTCTATATTGAGTGAAGGGTTGAAAACACGCCAAAATTATCCGTTTTTTCGAGTTTCATACTCTGAACTATCATCAATTATTTATCAAAACATACATCTGTTGTTCCGTTTTCCTATCATTCGAATGATGGTGATATTTCGTGTAGGAAAAGGGATCAAGTGATAGTTGAGGTGTATTTTGATAAATAGTTGATGAAAGTTCAGGTAGATAGGAAACTCACATACGTGGTAGTTCAAGTATGAAACTTGAATAAAAAGAGATACTTTATGTGTGTTTTTGACCATTAACTCTTCCATTATATTTGGTTTAATTCCACTTGCTTCCTTATAGAACACACTTGGAAGGAACAGGTGGCGTTCTTGTTGCACGAATCTGTCATCTTTTTCATCAGTAAGTACTTCTGATTGCAAGTGGATGACTTCTTTGGATTCCGGGAAAAATTGGTGTAAATTGAACAATTTAAATGAGAAATGGAGTCCTCGCTCCTCATAAGGTCTAAAAAGGGAAGGAAAAAAAGGAGAAGAAGAAAAGTCTAGAGGAAAAAAAGGGAAGAAAGAAGAGAATACTCCAACAGAAAAATAAGGTGGCAATCTTGTAGTAAAAGAATTAGCTCAACGGGTATTATTTCTTAGGATAGTGTAATCTATGCAAATAGGGTGCTTGCGCTTTTTCCTTGTGTATATTCTCTGTCATTCAGTTGTGGTAATGTATTTGGCTTCAGAAATTTGTTTTAACTCACTAAATTTTCTGTTATGTTACATTTTCAGCGGCAGGACTCTTGGAGCATCCATCACTCAAGAGGATTGCAAGTGAAGAAACATGTGCTCCCATATAGAAGCAATTTGTTGAAGTGTAATTCTTTCCTAAAACCTGACCAAGCTTTTGACATTTCTGTAAAGAATGCTGCTATTATACTGAAAAGGTAATTCTTGTTTGTGTTCAATAAGAGAAGACTATGCGTGTATTGTATGAATAGATCTGTGTAAAAATGAACAAATTGGAAATTCAAGATTAGATGACGATGATAGTTTTGAACAATGCTTGAATTAGGAGGGTAGCTATAGTATCTCAATAGAGATTGTTAAGAAACTAAGTTAAAGCAGCTATCTACACTGTGTGGCGGAACCCTTTAATTTTTTTAGATCTAATATATTGAGTTGAGTTTAGGTGTCTTGTAATGATTTACTAACCATAGTAAATAGGATGAGGTCTACCTGCTTATTTTGAGGAGAAAGCAATAGTTTCTTTATAGCACAACTTGTATGCACATACTTTTGTACCAGCGGCCAGATTTCACTTCTTTACCTGTTTAACGTAGGTTATATTGTTTCCTCGTAATTTAATTAAGAAGATTATTGTTGATTCATGCAGATCATACAATAGCTTACAAGGAAGCCCACATCTGC</genome_strand>
        <mrna_strand>TTTACCTTGTTTGTGCAAACCATCACACATACGATGTCGTTTTGAAGGTTTCTTCCTTTCTCTGTATTCCGTTAGACAAG...................................................................................................................................................................................................................................................................................................................GTTTTTTTCAAGAGAAGTAGAGGTTGAGGGGGGAATCATCACTATCCTTGTTTTTGTAATTAGGAAGACTTTTGATCAATGTGGAGTAGTTTAATTATCTTATGCTGCTAGTGATAGTTGGTTGTTTGCTTAGCTTTGTCCAATAATGGTTGCTGCTGGTTCTTTGCAGTTGTCCCATTATTGGGGGACTTGCAAGAACCATGAGCGCCTTAAGAAATATTCGCCTATACAG............................................................................................................................................................................................................................................................................................................................................................................................AACACACTTGGAAGGAACAGGTGGCGTTCTTGTTGCACAAATCTGTCATCTTTTTCATCA.........................................................................................................................................................................................................................................................................................................................................................................................CGGCAGGACTCTTGGAGTATCCATCACTCAAGAGGATTGCAAGTGAAGAAACATGTGCTCCCATATAGAAGCAATTTGTTGAAGTGTAATTCTTTCCTAAAACCTGACCAAGCTTTTGACATTTCTGTAAAGAATGCTGCTATTATACTGAAAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCATACAATAGCTTACAAGGAAGCCCACATCTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U321348" ref_strand="+" ref_description="SGN-U321348        Tomato 200607 #1 [9 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:At1g58200.2); similar to mechanosensitive ion channel domain-containing protein / MS ion channel domain-containing protein [Arabidopsis thaliana] (TAIR:At1g58200.1); similar to unknown [Lycopersicon esculentum] (GB:AAK84478.1); contains InterPro domain Mechanosensitive (MS) ion channel (InterPro:IPR006685) | chr5:3300226-3304762 REVERSE | Aliases: F12B17.160, F12B17_160(evalue: 5e-70, score=261) genbank/nr: gi|15144511|gb|AAK84478.1| unknown [Lycopersicon esculentum](evalue: 2e-178, score=628)">
      <seq>ttggatgtcagtaagataaataatattgtagctgacatgcgcaaagttttggcaaagaatccccaagttgagcaacagaggttacatagaagagtgttcctggagaatgtcaaccctgaaaatcaagctctgttgatcttaatatcctgctttgtcaagacatcacacttcgaggaatacttgtgtgtcaaggaagcaattttgttagatcttctcagagtcattcgacatcaccgagctcggcttgctactcccatccgtacagttcagaaaatatatagtgatgctgacttggacaacatgacatatgattctgccttcagtcgtggagcagcatcaactcgtccgttgctactgattgagccatcttataaagtcaatggggaagatcgcacaaaaggtcgaccaattcgcgtgaatggtgaagaagataccaaggaaaaggctaccatgaaaccggcacctgacagcaaggttgaaaccaagagcagacctgcatctgatcctaaaatcaaagaaacacttccagctaactctaatggtaaggatgtgccactttctgacttgaaacttgatcccaaagttgacaaaatggcacatgctgaatccaaagatgacattaaagcatcgtctgatccaaaatcgagtaaagcaacagtgaaaaacacttcacaaccggtcccaaaagctgagcttaagtctgcagaagttggtacttctgattccaaagatcctccagagaacatctctagcaacaagcaagttgagaaggtaagccaggggattggtcgcacgacaaatgtagttgataattccgcaacttctccatcagatgttagagagaaaacaggaaatgtcccatctacttcactacctaagagagaagatgaaaaacaacaagtctcacaaccatctgtgccatcgaaacctgcattggaagagaacattgttcttggtgttgctctcgagggttcaaaaagaacccttccaattgaagaagagctgtctcccccaccaaatccagcagaatcgaaggaaatggctactagccgtagtagtagtaatgcttctaccattgcagagaaagataaacaagacgggcagcgttcaaacagacctaattctacagctcccgatcagtcgagtaaagacaattgatccacctatgttttcactaacagttcatgtgacactaattcattgtcaacaccagatttgatgttacatggtccattgaaaagagttgtcttgatttccaggatagtgaagtatttaccctatccctctagtataaaattggtcaacttatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="64405" stop="68065"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="64705" g_stop="64725" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="64726" i_stop="64813" i_length="88">
            <donor d_prob="0.217" d_score="0.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64814" g_stop="64927" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="135" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64928" i_stop="65825" i_length="898">
            <donor d_prob="0.686" d_score="1.00"/>
            <acceptor a_prob="0.936" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65826" g_stop="65882" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="136" r_stop="192" r_length="57" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="65883" i_stop="66646" i_length="764">
            <donor d_prob="0.627" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="66647" g_stop="67765" g_length="1119"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="1311" r_length="1119" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U321348" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1311</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U321348" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="64705" e_stop="64725"/>
          <exon e_start="64814" e_stop="64927"/>
          <exon e_start="65826" e_stop="65882"/>
          <exon e_start="66647" e_stop="67765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGATGTCAGTAAGATAAATGTGAGCATTACTTCACTCGCGTAGCCAAGAAAATACAGCAAAATAAGTTATACTACTGATGTTTGATCTTACCATGACTTTTCTGTAGAATATTGTAGCTGACATGCGCAAAGTTTTGGCAAAGAATCCCCAAGTTGAGCAACAGAGGTTACATAGAAGAGTGTTCCTGGAGAATGTCAACCCTGAAAATCAAGCTCTGTTGGTTAGTGTCATTGTTTGATTATTAATATCTTGTGACTTTTGGATGGATCGTCATTATCAGTGTAAAGGTTGCTTTAGTTACATGCTTTCCTAACCAGTATGTTTCGAAAATTATCTTGGGTGCTTTTACTTCTCTCGGGCGTAAGAGTGTCTGGTGTGCTTGCAATTTTCTAGATCTGGAGTACCCAGAGTTATTTCATAAATTGTGGCTGCTGCTTTGGTTGCCCCCAGATATAATGGGCTAGAATTGTATCTTAATTGAAGTTGGTAGACTCTTTTAACAAAGAATTAGGGTTGTCTTCCAAACTAATCAATTGAATTGCAGTTCCCGAGCAGGACGTATAGAAAGAAGCAAACTATGTAAACTCAAGGCACACTACCTTGTGCCCATTTACTGAAGATTTGTGCTTCGTGAGTATCAGTGAGACCATTATATTAGTTCACCTCGTGATCTATTTACCTTGAGAACTGGTACTTAAAGCAAGTAAATCAAGAAGTACCACTCTCCTTCTTTGATTCAAGGTAGCGTAAAGTATAACCAGAACACAGTATGTGAATATTATCTAAGTTCATTATGTAATGGCAGTATATCAAATTGACTGATGATCTTTCCATTTGCTCATGGTCCAGTTGAACCTAGTCCACCCTGCTTGCCTGCTTTCAATCTGTTATTACTTGGGGTTATGGCTAACCATCCATTTAGCGTACTCTGTATGTCAGGGAAACAATTGTTGTCATGTGTGTGTTTGTTTGTACGGTTTGGCAAGTGAGAGACTCAGAAATTCTCGAAATGCTCCTCAACATGTTTTTCTGTCTCACATGAAAAGTTGCTTGACATTCTTGAAATTCTATCCGCCGGTTTATATACTCTTGTAAATATCTGCTTCATTATTGTGCAGATCTTAATATCCTGCTTTGTCAAGACATCACACTTCGAGGAATACTTGTGTGTCAAGGTGAGTGAAGATGCTGCTACAAATCCTATATGAAGAGTTTCTGTAATCCACAATATTTTGTAAAACAATAAAATGTTCTATCCTCAATTTGAAGCCCACTGATTTCTGTAACTGTAGTATTAATCCTGGCAATGGTAGGAAATTGTCGATAAAATGTTTCTTTCAAAATTCCCATGTATATATGCAAATGTAGTTGATTGTTCCTTGCCGAAGTTCACTTCTCTCCGAACCCTCCCATCACTCACTCCCCAAAAATCAAGTAATTGAAAAGCCACAGTTCTGTAGGTGCCAGTGACAAAATTATTTGTTGGAACTAATGATCTAGTCCAATGAGATGTGCTCTTTTCTATATTCTGCCTGGCTTATGAACAATAGGCAATAAGTTTACTTTATCCAGAAAAGAGTGGAAAAAGAAGGCAATGATTTCTCTGTCTTCTGAGAGGCTTGACACTTGAATGTAGCTAGCTATAAGTAATTTTTCGGCTTCTGAAGGTTGCTTCATCAGATGATTCTTCTGCGTATTACGAATAATCTGCTCATGAAATACGTAGCGATTTGCTGTTTCAAATGTCTGTTTAACAAGAGATGGTTGAAATATGGAATTTGTTAACTGAGATGGAAGTTGACACCTACCTCTTTAATGGTCATTTAGTTTCAGGAAGGATACTTCTCATTTGCTATTGCTAGTCGGTTTTGGTTCCATTTCATTTGGAGATCGACAACTTTGTGTTTTGACTTTTTCTTTTTTTCTTGGATGATATTAGGAAGCAATTTTGTTAGATCTTCTCAGAGTCATTCGACATCACCGAGCTCGGCTTGCTACTCCCATCCGTACAGTTCAGAAAATATATAGTGATGCTGACTTGGACAACATGACATATGATTCTGCCTTCAGTCGTGGAGCAGCATCAACTCGTCCGTTGCTACTGATTGAGCCATCTTATAAAGTCAATGGGGAAGATCGCACAAAAGGTCGACCAATTCGCGTGAATGGTGAAGAAGATACCAAGGAAAAGGCTACCATGAAACCGGCACCTGACAGCAAGGTTGAAACCAAGAGCAGACCTGCATCTGATCCTAAAATCAAAGAAACACTTCCAGCTAACTCTAATGGTAAGGATGTGCCACTTTCTGACTTGAAACTTGATCCCAAAGTTGACAAAATGGCACATGCTGAATCCAAAGATGACATTAAAGCATCGTCTGATCCAAAATCGAGTAAAGCAACAGTGAAAAACACTTCACAACCGGTCCCAAAAGCTGAGCTTAAGTCTGCAGAAGTTGGTACTTCTGATTCCAAAGATCCTCCAGAGAACATCTCTAGCAACAAGCAAGTTGAGAAGGTAAGCCAGGGGATTGGTCGCACGACAAATGTAGTTGATAATTCCGCAACTTCTCCATCAGATGTTAGAGAGAAAACAGGAAATGTCCCATCTACTTCACTACCTAAGAGAGAAGATGAAAAACAACAAGTCTCACAACCATCTGTGCCATCGAAACCTGCATTGGAAGAGAACATTGTTCTTGGTGTTGCTCTCGAGGGTTCAAAAAGAACCCTTCCAATTGAAGAAGAGCTGTCTCCCCCACCAAATCCAGCAGAATCGAAGGAAATGGCTACTAGCCGTAGTAGTAGTAATGCTTCTACCATTGCAGAGAAAGATAAACAAGACGGGCAGCGTTCAAACAGACCTAATTCTACAGCTCCCGATCAGTCGAGTAAAGACAATTGATCCACCTATGTTTTCACTAACAGTTCATGTGACACTAATTCATTGTCAACACCAGATTTGATGTTACATGGTCCATTGAAAAGAGTTGTCTTGATTTCCAGGATAGTGAAGTATTTAGCCTATCACTCTAGTATAAAATTGGTCAACTTATAG</genome_strand>
        <mrna_strand>TTGGATGTCAGTAAGATAAAT........................................................................................AATATTGTAGCTGACATGCGCAAAGTTTTGGCAAAGAATCCCCAAGTTGAGCAACAGAGGTTACATAGAAGAGTGTTCCTGGAGAATGTCAACCCTGAAAATCAAGCTCTGTTG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATCTTAATATCCTGCTTTGTCAAGACATCACACTTCGAGGAATACTTGTGTGTCAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCAATTTTGTTAGATCTTCTCAGAGTCATTCGACATCACCGAGCTCGGCTTGCTACTCCCATCCGTACAGTTCAGAAAATATATAGTGATGCTGACTTGGACAACATGACATATGATTCTGCCTTCAGTCGTGGAGCAGCATCAACTCGTCCGTTGCTACTGATTGAGCCATCTTATAAAGTCAATGGGGAAGATCGCACAAAAGGTCGACCAATTCGCGTGAATGGTGAAGAAGATACCAAGGAAAAGGCTACCATGAAACCGGCACCTGACAGCAAGGTTGAAACCAAGAGCAGACCTGCATCTGATCCTAAAATCAAAGAAACACTTCCAGCTAACTCTAATGGTAAGGATGTGCCACTTTCTGACTTGAAACTTGATCCCAAAGTTGACAAAATGGCACATGCTGAATCCAAAGATGACATTAAAGCATCGTCTGATCCAAAATCGAGTAAAGCAACAGTGAAAAACACTTCACAACCGGTCCCAAAAGCTGAGCTTAAGTCTGCAGAAGTTGGTACTTCTGATTCCAAAGATCCTCCAGAGAACATCTCTAGCAACAAGCAAGTTGAGAAGGTAAGCCAGGGGATTGGTCGCACGACAAATGTAGTTGATAATTCCGCAACTTCTCCATCAGATGTTAGAGAGAAAACAGGAAATGTCCCATCTACTTCACTACCTAAGAGAGAAGATGAAAAACAACAAGTCTCACAACCATCTGTGCCATCGAAACCTGCATTGGAAGAGAACATTGTTCTTGGTGTTGCTCTCGAGGGTTCAAAAAGAACCCTTCCAATTGAAGAAGAGCTGTCTCCCCCACCAAATCCAGCAGAATCGAAGGAAATGGCTACTAGCCGTAGTAGTAGTAATGCTTCTACCATTGCAGAGAAAGATAAACAAGACGGGCAGCGTTCAAACAGACCTAATTCTACAGCTCCCGATCAGTCGAGTAAAGACAATTGATCCACCTATGTTTTCACTAACAGTTCATGTGACACTAATTCATTGTCAACACCAGATTTGATGTTACATGGTCCATTGAAAAGAGTTGTCTTGATTTCCAGGATAGTGAAGTATTTACCCTATCCCTCTAGTATAAAATTGGTCAACTTATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U314017" ref_strand="+" ref_description="SGN-U314017        Tomato 200607 #1 [56 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; | chr5:26189358-26192259 FORWARD | Aliases: MNA5.21, MNA5_21(evalue: 0, score=731) genbank/nr: gi|15144512|gb|AAK84479.1| putative auxin growth promotor protein [Lycopersicon esculentum](evalue: 0, score=950)">
      <seq>aattggtgtaaacacctttgcatcttgataattgataaagacaacccacccccaaagcatttacacttcacaaaaactaatttttgtagcagtaaaatcacttcagtgtggcagctgtaagcttgctgtttgcttgtttggttttattatatgcattgatttttggtatatgtgttgatattatatggaaggggagagataggtgcccccatgtgagatgcttttactgaggctcataatgatattggcccctctttactcttcctactgattcttgatttctttctctctttcttccttgaaaaaagattgctttttttctttcttgtattccttactttcaagtttttgagagtttttaggcacacccttttctttattttgctttatattttcattaggggggtgagccaaataccaaaaatacactgcagcaagaagaagaagaagagaaagcagcatgagtggaaatcatagaggagggggtgctatggctggtcttattgtggttcttttgactgtttactttactacttttagctatggctcacccaccattctttctgatttgaatgctccaaaattcaggcactcacgtcttgcgaagagtgctatacaacgccaaacttccaatgaagaacagtcacggctttggacacctttggaacaccaaggatggaaaccttgtactaaatctgatgctgcatccacagtacctgaaaaatctgagggatacgttcaagtgttccttgatggtggactaaatcaacagaggatggggatctgtgatgcagttgtcgttgccaaaattctgaatgccacacttgtgatccctcagttggaagtaaatcctgtttggcaagattcaagctcattcgaggatatctttgatgtggatcacttcatcaatgcattgaaagacgacgtagctatagtcaaagagttgcctgatgaattctcttggagcacacgagaatattatggcatagctatccgacctacaagaatcaagactgctccagttcatgcttcagcaaattggtatttagagaatgtgtcacctgtactgcagagttatggaattgctgccatagctccattttctcaccgactgacatttgacaacatgcccaagtacctccaacacctacgatgtaaagtcaactttcaagcattggcctttgttcctcacatcagacaactcggggatgcccttatcactcgccttaggtttcctcctagtgaagacaacatggttagtaacaactaccttagagaggttactgatctaaagcccaaacaaggagttggcaagtttgctgttcttcaccttcgctttgacaaggatatggctgctcattcagcctgtgattttggtggcggcaaggctgaaaatttggctctagctaaatacaggcaagtaatttggggaggaagggtcatcaactctcaatttactgatgaagaattaaggagtcaaggaaggtgcccattgactcccgaagaagttggattgctgctggcagctttgggatttgacaacaacactcgcctatatcttgcctcccataaggtttatggcggggaacgcagggtttcagccttaagaagtttgtttcccctgatggaagataaaaagagccttgcttcttctgaggaaagagctcttatcaaaggaaaggcttcattattggctgcagttgattattatgttggcatgcacagtgatatttttgtttccgcctcccctggaaatatgcacaatgcaatggtcggacagagaacatacaacaatatgaagacaataaggccaaatatggcattgttaggccagcttttcttgaacaagacactcacttggcctgagtttcaagaatcagtaattgaagggcaccaaaacagacaaggccaaatcagactccgcaaacccaagcaatccctctatacatatcctgctcctgattgtatgtgccaagcttgagagggcctaccatatagatctttatcactatttgtttggacatcaaattattgtttattatgccttatattatagttataaataagatgccaccccttttgttgacttgtagggggtaatttatatttatgtgtcaccacgttgagattttacggtaggggtggaaggaatatgttgtacaatatgtgtattactcctatgaagagtgcatatacagatagtagtattctagtcttgacagatatattttactatgtaatgtcagttcttgtagtttattcaaaagggtggtttgtttcatttggttgatgtagcagaggttgataatattatcaaatggcagctagtggaattgatttcaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="74672" stop="68043"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74372" g_stop="73808" g_length="565"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="565" r_length="565" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="73807" i_stop="72057" i_length="1751">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72056" g_stop="71994" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="628" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71993" i_stop="71892" i_length="102">
            <donor d_prob="0.963" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71891" g_stop="71810" g_length="82"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="710" r_length="82" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71809" i_stop="71661" i_length="149">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71660" g_stop="71590" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="711" r_stop="781" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71589" i_stop="71463" i_length="127">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.680" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="71462" g_stop="71374" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="782" r_stop="870" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="71373" i_stop="71295" i_length="79">
            <donor d_prob="0.970" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="71294" g_stop="71091" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="871" r_stop="1074" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="71090" i_stop="70707" i_length="384">
            <donor d_prob="0.976" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="70706" g_stop="70436" g_length="271"/>
          <reference_exon_boundary r_type="cDNA" r_start="1075" r_stop="1345" r_length="271" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="70435" i_stop="70201" i_length="235">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.900" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="70200" g_stop="69973" g_length="228"/>
          <reference_exon_boundary r_type="cDNA" r_start="1346" r_stop="1573" r_length="228" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="69972" i_stop="69859" i_length="114">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="69858" g_stop="69661" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1574" r_stop="1771" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="69660" i_stop="68914" i_length="747">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.971" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="68913" g_stop="68344" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1772" r_stop="2341" r_length="570" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2342" polyA_stop="2367"/>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U314017" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2341</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U314017" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74372" e_stop="73808"/>
          <exon e_start="72056" e_stop="71994"/>
          <exon e_start="71891" e_stop="71810"/>
          <exon e_start="71660" e_stop="71590"/>
          <exon e_start="71462" e_stop="71374"/>
          <exon e_start="71294" e_stop="71091"/>
          <exon e_start="70706" e_stop="70436"/>
          <exon e_start="70200" e_stop="69973"/>
          <exon e_start="69858" e_stop="69661"/>
          <exon e_start="68913" e_stop="68344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTGGTGTAAACACCTTTGCATCTTGATAATTGATAAAGACAACCCACCCCCAAAGCATTTACACTTCACAAAAACTAATTTTTGTAGCAGTAAAATCACTTCAGTGTGGCAGCTGTAAGCTTGCTGTTTGCTTGTTTGGTTTTATTATATGCATTGATTTTTGGTATATGTGTTGATATTATATGGAAGGGGAGAGATAGGTGCCCCCATGTGAGATGCTTTTACTGAGGCTCATAATGATATTGGCCCCTCTTTACTCTTCCTACTGATTCTTGATTTCTTTCTCTCTTTCTTCCTTGAAAAAAGATTGCTTTTTTTCTTTCTTGTATTCCTTACTTTCAAGTTTTTGAGAGTTTTTAGGCACACCCTTTTCTTTATTTTGCTTTATATTTTCATTAGGGGGGTGAGCCAAATACCAAAAATACACTGCAGCAAGAAGAAGAAGAAGAGAAAGCAGCATGAGTGGAAATCATAGAGGAGGGGGTGCTATGGCTGGTCTTATTGTGGTTCTTTTGACTGTTTACTTTACTACTTTTAGCTATGGCTCACCCACCATTCTTTCTGTAAGTTTAAGTTTCTTATCTTTTTCTTTAGATTTTGCTTGTCTTGTGTAATTGTAAACATAGTTATTTAGTCTTCTTGTTGTTTCTTGAATGTACCCTTTTCTTGTTTCCTTCTGTTTTGTGTTCTTTGTTGGTAGTTGGAGAAAGAGGGGATGGAAAAACAGTAAAAATGCAATCTTTAAGTTTCTTCATTGTACCTTTTTTTGTTTTCTTCTATTTGATGTTCTTTGTTGGTGGTCTAATGGAATTGAATGGATAAGGTAGATGGAGAAAGAGGGTGATGGGAAAAACAGTAAAAATGCAATCTTTAAGTTTCTTCAATGTACCTTTTTTTTGGTTTTCTTCTATTTTGTGTTCTTTGTTGGTGGTCTAATGGAAATGAATGGAAAAGGTAGATGGAGAAAGAGGGTGATGGGAAAAAACAGTAAAAATGCAATCTTTAATGTGAAAAGGGTTTTAGAGTGAGATTTGGGGAATTTTGATGAAAATGGTCATCTAAAGATTATTCAATTTTACAAGGGTAGGTAAGGTGGTAAAAGATTTAGATCTTAGGGTCGGCAGAAATGGAAGTGTAGATAGTGGTAGGGTTAAGGGGGTGGACTTTTTCTATGTGAGGAGGTAAGCATTAGTCTTGATTTTTTTGGTGTATATGAGCAATTGTGGAAATATTTTATGATGCGGAAATTAGGGTTTGTTTACTAGCATTGTGGAGAAAGTTGTTTTTTGGTTAGGTGGATTTTGCTGATTTTGTAGTATCTTTTGATGTCAAGACAGCAGAAAAGTGGAGAAGAAACTGGCAAAAAACTATTGTTTTGGTATAATCTGTAAATCTAGCAGTGATTGGTGTTTAAGGAGTGATTTGGTGAGTTACTAAAGTTGGATCTGTTGACTTTGGACTAATTAAGTGTCATTTTTTTAATGGTCTGTTAATCCTTCCGGTATTAAACCCGTCTTCATGCCACTTGCCTGATCCCCAGGAATGGGAAGTTTTTGAATCTGTTGACTGTACAGTCTGTATGGAAGAATTCTCATGTCATTGAAAAGATCTGATTTTTGGGTAAATTTTTATATGTTTGGTAGATCAACACAGTCAAAGAAGTTGCTATTGCCTTGAAATAATAATTATTATATAATAATAATAATAAAATTCTGTTTGGTGCAAGATGATTATACTTCTCTTTCAAAGAGAGGAAATCATAATTTTCTGGGAAAAACATCACATGCATATCCTAGCCCAAAGAAGAGGAAACAATCATTCTTTTCTCAAGGGGCAAGCAATAAACTAATCATTTCTATCCATGGTTTTGGCTTCAATGTCAATTTGAATTATTGAAACTTGAAGGCTTGTGTAATGTTATACTATTTTATTGTCTCTACTGTTGCAGTTGCTACTGCATAAAAGGATGAAAAGGGGTAACTGAACTTAAGGTCTGCATAACTTTCTTGAATAGAACCTAACATGGCTAGCCAAGCAAACAGGATATAACCAAAGAAAATATCAAGGTTGCTATGATTATTCCCGAGTCTGAACTACATGGACTCTAAAAGGACTAGAGAAGTTCGATTAAACAACATATTTAGATTCTTTTGTTCCAATTCCAAAATTCCTTGTGATCTCTTTGACAAACTTTAGGAATCTGGTAAATTTGTGTCCATAAAGAATAAATTACGTTTTTTTGGTATGTATCTATGTAATTATTTCTGGAACAATTTAGAAAAAATTGATTGTATAGGCTTATTTGCATGTGCAGGATTTGAATGCTCCAAAATTCAGGCACTCACGTCTTGCGAAGAGTGCTATACAACGCCAAACTGTGCGTAAGACCTTATTGATCACACTCACTTGTTCCTCTTAAATTAACTTCTGTTCTCCTGTCATGAGTTTGTGTCTTGCTTGGTTTCTTCTATGTCTTTAGTCCAATGAAGAACAGTCACGGCTTTGGACACCTTTGGAACACCAAGGATGGAAACCTTGTACTAAATCTGATGCTGCATCCAGTGAGTGTCTATGATCACATATTCTGATACATCTAAAATTTACATCTAGTTTGTGAAGGCTTGCTGTTAAGCAATAACTCGATTGAGCATCAGCGCGATCTTGCCTTCTAATTTTCCAATGACTAATTACTGTTCCTTGCACTATGCAGCAGTACCTGAAAAATCTGAGGGATACGTTCAAGTGTTCCTTGATGGTGGACTAAATCAACAGAGGATGGGGGTGCGTATTATGATTCCTTTGTTTGATTGTTCATAGAAACAACATTAATGAATAATGCTCAACTCCTTTAATTATAGAAACAAATTGTTTGACCCTTCATTACTGACATCTATATTTCTTGGAGAAGATCTGTGATGCAGTTGTCGTTGCCAAAATTCTGAATGCCACACTTGTGATCCCTCAGTTGGAAGTAAATCCTGTTTGGCAAGATTCAAGGTATCTTAAGTATAGTGCTAAAATTGGTTTTCTTTCAACTTTTAAAAACATATACAAGTTATCGTCCTCTTTCCTACAGCTCATTCGAGGATATCTTTGATGTGGATCACTTCATCAATGCATTGAAAGACGACGTAGCTATAGTCAAAGAGTTGCCTGATGAATTCTCTTGGAGCACACGAGAATATTATGGCATAGCTATCCGACCTACAAGAATCAAGACTGCTCCAGTTCATGCTTCAGCAAATTGGTATTTAGAGAATGTGTCACCTGTACTGCAGAGGTTAGTCACAACATTGTTTTTTTTGAAGATTTTGGTCTAGTTGTATGATAGTCATGTAAACTGTGTTCAGTCTCTCAACCCACCCGTATGACAAAGTACATGTATAATTGGTAAATTACTGGCAGGATTTAGTGCTCAAAACTTAAGGGAATTCTACAAAAGTTCCATTGCCCAGTATTTTACTATTCATTTTAAGTTGTATGTTCCCTTAAACCAAAAATTTAAGTTAGGCATGGACTAAACATTATGTGTTTGATTTATTTCTTGATATGATCATATTTTGTTCGTTCAGTTATTAGCTTCTGAAGGTAGTAATTCTCTTATCAGCCTTTTGCTGGAATTTGTGACATTGCTTTGTATATTAATATTTTATGAATGGATCAGTTATGGAATTGCTGCCATAGCTCCATTTTCTCACCGACTGACATTTGACAACATGCCCAAGTACCTCCAACACCTACGATGTAAAGTCAACTTTCAAGCATTGGCCTTTGTTCCTCACATCAGACAACTCGGGGATGCCCTTATCACTCGCCTTAGGTTTCCTCCTAGTGAAGACAACATGGTTAGTAACAACTACCTTAGAGAGGTTACTGATCTAAAGCCCAAACAAGGAGTTGGCAAGTTTGCTGTTCTTCACCTTCGCTTTGACAAGGTAAAAACACCTTACTGTTGTTGAACTACCTATCCTGCAATATCTCCCGATCAAATATTAGTACTTCCACTTTCCTGAAAAAATCAGCTTTCCTTTACTGCCTGTTAAAGGCAATATAACACTACTTATTGATGAATATATCTCAGTACCGTATTTTTGCTGTATTTTTTAGTTAATTTTACTCCACCCAAAGTGTCACATGATTTAAGAACCTTTGGACTTGTTATCTCTCCAGGATATGGCTGCTCATTCAGCCTGTGATTTTGGTGGCGGCAAGGCTGAAAATTTGGCTCTAGCTAAATACAGGCAAGTAATTTGGGGAGGAAGGGTCATCAACTCTCAATTTACTGATGAAGAATTAAGGAGTCAAGGAAGGTGCCCATTGACTCCCGAAGAAGTTGGATTGCTGCTGGCAGCTTTGGGATTTGACAACAACACTCGCCTATATCTTGCCTCCCATAAGGTCTTCACTGAAGTTCTGCATTTATAGAAACAATATGCCTTTCTTTAAGGCTAGAATACTTGAAGTGTAAAGCTAATATCTTCGTGTCCTGAAGCTTGTTCATGTTTTTTCTAGGTTTATGGCGGGGAACGCAGGGTTTCAGCCTTAAGAAGTTTGTTTCCCCTGATGGAAGATAAAAAGAGCCTTGCTTCTTCTGAGGAAAGAGCTCTTATCAAAGGAAAGGCTTCATTATTGGCTGCAGTTGATTATTATGTTGGCATGCACAGTGATATTTTTGTTTCCGCCTCCCCTGGAAATATGCACAATGCAATGGTAATCATTCAAATCTTTTCATTTTCTAGTTTCACTGTGCTTGCTATACCTCCCTTTAGAATCTACTCCATTAGTTGTTAGTCATTTCTTCCAAACGTGTTAATAGTAGATTTAAGTTATATACACTGATAGAATATAGTTTAACTTGTGATCACAGGTTAGTTACAATTACCGGATTACTCCCTCTCTGTTGTGCCTTATGTGACATTCTTTCCTTTTAGTTCTTTTTGGTCTGACAAGCTAAGAATGACACCTTTCTAATCAATAAAAACATTTTAATCTTGAACATGCCAATTAAACCTTAAAGTCATGGTTTTATAGTCACAGAAATGTAATGACATTTGAATCACTAGCATCAAAAGTCTGTCATTCTTTCTGTCTACTCGAAGACTTCACGTAAAATGGAACGTTCCACTCCAAGTGCATCACATTAAGTGAGACAGACGGCAAAGAGTTACCCTAAGTGATTTGTTGATGTTACGGTTCCTTGCATGTATGCTCTGCACTGCTTACCTATTAGTTGTCTTTTTTTTTTTTCACTGTCGTTTTTCCTTTCTGTTACTACCTTGATTTGCTTCACTCCACGAGGTAGGAGTAAGGTAATGCATACACTGGGGATGTTGTTGATTTTGGCCGAGTGAATAGTTCTTACACGGTCAATGCACAGAACACAGACGCCGCATTATTAGGCTGACTAAATGTGGTCCACACAGCAAATGAATAATACACCTACCTTGAAATTGACAGGTCGGACAGAGAACATACAACAATATGAAGACAATAAGGCCAAATATGGCATTGTTAGGCCAGCTTTTCTTGAACAAGACACTCACTTGGCCTGAGTTTCAAGAATCAGTAATTGAAGGGCACCAAAACAGACAAGGCCAAATCAGACTCCGCAAACCCAAGCAATCCCTCTATACATATCCTGCTCCTGATTGTATGTGCCAAGCTTGAGAGGGCCTACCATATAGATCTTTATCACTATTTGTTTGGACATCAAATTATTGTTTATTATGCCTTATATTATAGTTATAAATAAGATGCCACCCCTTTTGTTGACTTGTAGGGGGTAATTTATATTTATGTGTCACCACGTTGAGATTTTACGGTAGGGGTGGAAGGAATATGTTGTACAATATGTGTATTACTCCTATGAAGAGTGCATATACAGATAGTAGTATTCTAGTCTTGACAGATATATTTTACTATGTAATGTCAGTTCTTGTAGTTTATTCAAAAGGGTGGTTTGTTTCATTTGGTTGATGTAGCAGAGGTTGATAATATTATCAAATGGCAGCTAGTGGAATTGATTTC</genome_strand>
        <mrna_strand>AATTGGTGTAAACACCTTTGCATCTTGATAATTGATAAAGACAACCCACCCCCAAAGCATTTACACTTCACAAAAACTAATTTTTGTAGCAGTAAAATCACTTCAGTGTGGCAGCTGTAAGCTTGCTGTTTGCTTGTTTGGTTTTATTATATGCATTGATTTTTGGTATATGTGTTGATATTATATGGAAGGGGAGAGATAGGTGCCCCCATGTGAGATGCTTTTACTGAGGCTCATAATGATATTGGCCCCTCTTTACTCTTCCTACTGATTCTTGATTTCTTTCTCTCTTTCTTCCTTGAAAAAAGATTGCTTTTTTTCTTTCTTGTATTCCTTACTTTCAAGTTTTTGAGAGTTTTTAGGCACACCCTTTTCTTTATTTTGCTTTATATTTTCATTAGGGGGGTGAGCCAAATACCAAAAATACACTGCAGCAAGAAGAAGAAGAAGAGAAAGCAGCATGAGTGGAAATCATAGAGGAGGGGGTGCTATGGCTGGTCTTATTGTGGTTCTTTTGACTGTTTACTTTACTACTTTTAGCTATGGCTCACCCACCATTCTTTCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTGAATGCTCCAAAATTCAGGCACTCACGTCTTGCGAAGAGTGCTATACAACGCCAAACT......................................................................................................TCCAATGAAGAACAGTCACGGCTTTGGACACCTTTGGAACACCAAGGATGGAAACCTTGTACTAAATCTGATGCTGCATCCA.....................................................................................................................................................CAGTACCTGAAAAATCTGAGGGATACGTTCAAGTGTTCCTTGATGGTGGACTAAATCAACAGAGGATGGGG...............................................................................................................................ATCTGTGATGCAGTTGTCGTTGCCAAAATTCTGAATGCCACACTTGTGATCCCTCAGTTGGAAGTAAATCCTGTTTGGCAAGATTCAAG...............................................................................CTCATTCGAGGATATCTTTGATGTGGATCACTTCATCAATGCATTGAAAGACGACGTAGCTATAGTCAAAGAGTTGCCTGATGAATTCTCTTGGAGCACACGAGAATATTATGGCATAGCTATCCGACCTACAAGAATCAAGACTGCTCCAGTTCATGCTTCAGCAAATTGGTATTTAGAGAATGTGTCACCTGTACTGCAGAG................................................................................................................................................................................................................................................................................................................................................................................................TTATGGAATTGCTGCCATAGCTCCATTTTCTCACCGACTGACATTTGACAACATGCCCAAGTACCTCCAACACCTACGATGTAAAGTCAACTTTCAAGCATTGGCCTTTGTTCCTCACATCAGACAACTCGGGGATGCCCTTATCACTCGCCTTAGGTTTCCTCCTAGTGAAGACAACATGGTTAGTAACAACTACCTTAGAGAGGTTACTGATCTAAAGCCCAAACAAGGAGTTGGCAAGTTTGCTGTTCTTCACCTTCGCTTTGACAAG...........................................................................................................................................................................................................................................GATATGGCTGCTCATTCAGCCTGTGATTTTGGTGGCGGCAAGGCTGAAAATTTGGCTCTAGCTAAATACAGGCAAGTAATTTGGGGAGGAAGGGTCATCAACTCTCAATTTACTGATGAAGAATTAAGGAGTCAAGGAAGGTGCCCATTGACTCCCGAAGAAGTTGGATTGCTGCTGGCAGCTTTGGGATTTGACAACAACACTCGCCTATATCTTGCCTCCCATAAG..................................................................................................................GTTTATGGCGGGGAACGCAGGGTTTCAGCCTTAAGAAGTTTGTTTCCCCTGATGGAAGATAAAAAGAGCCTTGCTTCTTCTGAGGAAAGAGCTCTTATCAAAGGAAAGGCTTCATTATTGGCTGCAGTTGATTATTATGTTGGCATGCACAGTGATATTTTTGTTTCCGCCTCCCCTGGAAATATGCACAATGCAATG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCGGACAGAGAACATACAACAATATGAAGACAATAAGGCCAAATATGGCATTGTTAGGCCAGCTTTTCTTGAACAAGACACTCACTTGGCCTGAGTTTCAAGAATCAGTAATTGAAGGGCACCAAAACAGACAAGGCCAAATCAGACTCCGCAAACCCAAGCAATCCCTCTATACATATCCTGCTCCTGATTGTATGTGCCAAGCTTGAGAGGGCCTACCATATAGATCTTTATCACTATTTGTTTGGACATCAAATTATTGTTTATTATGCCTTATATTATAGTTATAAATAAGATGCCACCCCTTTTGTTGACTTGTAGGGGGTAATTTATATTTATGTGTCACCACGTTGAGATTTTACGGTAGGGGTGGAAGGAATATGTTGTACAATATGTGTATTACTCCTATGAAGAGTGCATATACAGATAGTAGTATTCTAGTCTTGACAGATATATTTTACTATGTAATGTCAGTTCTTGTAGTTTATTCAAAAGGGTGGTTTGTTTCATTTGGTTGATGTAGCAGAGGTTGATAATATTATCAAATGGCAGCTAGTGGAATTGATTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U314016" ref_strand="+" ref_description="SGN-U314016        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam PF03138: Plant protein family. The function of this family of plant proteins is unknown; previously annotated as 'PsRT17-1 like protein' based on similarity to PsRT17-1 (GP:1778376) (Pisum sativum) which was based upon similarity to axi 1 protein (GB:X80301) (GI:559920) from (Nicotiana tabacum), which, due to scienitific fraud was retracted. Retraction in: Schell J. EMBO J 1999 May 17;18(10):2908. PMID:10400497. | chr4:12667368-12670023 REVERSE | Aliases: F22K18.270, F22K18_270(evalue: 2e-20, score=95.5) genbank/nr: gi|15144512|gb|AAK84479.1| putative auxin growth promotor protein [Lycopersicon esculentum](evalue: 1e-25, score=119)">
      <seq>cctgatgaattctcttggagcacacgagaatattatggcatagctatccgacctacaagaatcaagactgctccagttcatgcttcagcaaattggtatttagagaatgtgtcacctgtactgcagaggttagtcacaacattgttttttttgaagattttggtctagttgtatgatagtcatgtaaactgtgttcagtctctcaacccacccgtatgacaaagtacatgtataattggtaaattactggcaggatttagtgctcaaaacttaagggaattctacaaaagttccattgcccagtattttactattcattttaagttgtatgttcccttaaaccaaaaatttaagttaggcatggactaaacattatgtgtttgatttatttcttgatatgatcatattttgttcgttcagttattagcttctgaaggtagtaattctcttatcagccttttgctggaatttgtgacattgctttgtatattaatattttatgaatggatcagttatggaattgctgccatagctccattttctcaccgactgacatttgacaacatgcccaagtacctccaacacctacgatgtaaagtcaactttcaagcattggcctttgttcctcacatcagacaactcggggatgcccttatcactcgccttaggtttcctcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="71518" stop="70241"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71218" g_stop="70541" g_length="678"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="678" r_length="678" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U314016" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>678</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U314016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="71218" e_stop="70541"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTGATGAATTCTCTTGGAGCACACGAGAATATTATGGCATAGCTATCCGACCTACAAGAATCAAGACTGCTCCAGTTCATGCTTCAGCAAATTGGTATTTAGAGAATGTGTCACCTGTACTGCAGAGGTTAGTCACAACATTGTTTTTTTTGAAGATTTTGGTCTAGTTGTATGATAGTCATGTAAACTGTGTTCAGTCTCTCAACCCACCCGTATGACAAAGTACATGTATAATTGGTAAATTACTGGCAGGATTTAGTGCTCAAAACTTAAGGGAATTCTACAAAAGTTCCATTGCCCAGTATTTTACTATTCATTTTAAGTTGTATGTTCCCTTAAACCAAAAATTTAAGTTAGGCATGGACTAAACATTATGTGTTTGATTTATTTCTTGATATGATCATATTTTGTTCGTTCAGTTATTAGCTTCTGAAGGTAGTAATTCTCTTATCAGCCTTTTGCTGGAATTTGTGACATTGCTTTGTATATTAATATTTTATGAATGGATCAGTTATGGAATTGCTGCCATAGCTCCATTTTCTCACCGACTGACATTTGACAACATGCCCAAGTACCTCCAACACCTACGATGTAAAGTCAACTTTCAAGCATTGGCCTTTGTTCCTCACATCAGACAACTCGGGGATGCCCTTATCACTCGCCTTAGGTTTCCTCCT</genome_strand>
        <mrna_strand>CCTGATGAATTCTCTTGGAGCACACGAGAATATTATGGCATAGCTATCCGACCTACAAGAATCAAGACTGCTCCAGTTCATGCTTCAGCAAATTGGTATTTAGAGAATGTGTCACCTGTACTGCAGAGGTTAGTCACAACATTGTTTTTTTTGAAGATTTTGGTCTAGTTGTATGATAGTCATGTAAACTGTGTTCAGTCTCTCAACCCACCCGTATGACAAAGTACATGTATAATTGGTAAATTACTGGCAGGATTTAGTGCTCAAAACTTAAGGGAATTCTACAAAAGTTCCATTGCCCAGTATTTTACTATTCATTTTAAGTTGTATGTTCCCTTAAACCAAAAATTTAAGTTAGGCATGGACTAAACATTATGTGTTTGATTTATTTCTTGATATGATCATATTTTGTTCGTTCAGTTATTAGCTTCTGAAGGTAGTAATTCTCTTATCAGCCTTTTGCTGGAATTTGTGACATTGCTTTGTATATTAATATTTTATGAATGGATCAGTTATGGAATTGCTGCCATAGCTCCATTTTCTCACCGACTGACATTTGACAACATGCCCAAGTACCTCCAACACCTACGATGTAAAGTCAACTTTCAAGCATTGGCCTTTGTTCCTCACATCAGACAACTCGGGGATGCCCTTATCACTCGCCTTAGGTTTCCTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U323297" ref_strand="+" ref_description="SGN-U323297        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: AT3G27230.1 | Symbol: None | expressed protein | chr3:10055166-10056928 FORWARD | Aliases: K17E12.5 (evalue: 2e-146, score=303) genbank/nr: gi|27450532|gb|AAO14627.1| hypothetical protein [Prunus persica](evalue: 3e-164, score=337)">
      <seq>ttattttcactgatttagttgcttagttctactacaatcataaagtgaagcagccagcatcgaaaatctgtttgttttgagcaaaaaatgggatctgtttctttgaaaataggtgatggaactgctagattcaagaaagctacatattgttcttcagttctaaatctacttatgcttttctctgttgttacaactaatctttttgctttatatgcttttacatcctcacccaaaaacccccatcatcatcttcttctcccacatactcacaagaacatatctttaatctcagaacaagtttctttaattctaagacagattgattcttcacaaaaaaaacttgcccaaatggaaaaagagcttttaggctatgaaagttttgatctttctagtcccaaagttccaaatgaagtgagaaatttcttgcaaccccatttgctgcctttgggtaaagattcaagaactgggattactgaaatggtagcttctattggacattcttgtgtgaaatctttagatttgctttctcagtttatgagttataaggttaatggtctttgtcctgatgattggagtcttgggcagaagctgattcttagtggctgtgagcctttgccaagaaggaggtgttttgctaagacaatacctaaggttggtttacttaaattacctgattcattttggggaaattatagtgaaaagatttatagttggagtggtcttggttgtaagaatgtagcttgtttaaatgttaagaaattgaatagagattgtgctggtttttgatgttgtaagtagtggggggtatgagaagcaaagatatgttaagggtagagggaaaaatgatttcttgattgatgatgtattgggaatgctgggaaatggtgggggaattagaattggatttgatattggtggtggatctggtacatttgctgttagaatggctgaaaggaatgtgactatagttactgctacgttgaatgtcgatgcaccatttaacgagttcattgctgcacggggtgtattcccgttgtatttgagtttagatcatcggtttccctttcatgataatgtgtttgatttggtacatgtgggaaatgtattggatgtgagcggacgtcctgagaagttagagtttttagtgtttgatattgatagagttttgagggctggagggttgttttggttggataactttctttgttcaaatgaagacaagaaaactgcattaacgaggctgatcgaacgttttgggtacaaaaagcttaaatgggttgttggtgagaagatcaatgggtcgggaaaatctgaggtttatttgtctgctgttctacagaaaccagtaagagtttgatcgtatcgcggggtttctcatagaaaagctgtgcatgttcattattgacatagaataagtgaacgtattcgtcttcttttacacaactgctaaccagcatcataggagggaggcgggttcggctttgtggcaggtattatatgtctacgatctctaagattatcacttatctttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="85228" stop="83093"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84928" g_stop="83393" g_length="1536"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1533" r_length="1533" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U323297" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1536</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84928" e_stop="83393"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTTTCACTGATTTAGTTGCTTAGTTCTACTACAATCATAAAGTGAAGCAGCCAGCATCGAAAATCTGTTTGTTTTGAGCAAAAAATGGGATCTGTTTCTTTGAAAATAGGTGATGGAACTGCTAGATTCAAGAAAGCTACATATTGTTCTTCAGTTCTAAATCTACTTATGCTTTTCTCTGTTGTTACAACTAATCTTTTTGCTTTATATGCTTTTACATCCTCACCCAAAAACCCCCATCATCATCTTCTTCTCCCACATACTCACAAGAACATATCTTTAATCTCAGAACAAGTTTCTTTAATTCTAAGACAGATTGATTCTTCACAAAAAAAACTTGCCCAAATGGAAAAAGAGCTTTTAGGCTATGAAAGTTTTGATCTTTCTAGTCCCAAAGTTCCAAATGAAGTGAGAAATTTCTTGCAACCCCATTTGCTGCCTTTGGGTAAAGATTCAAGAACTGGGATTACTGAAATGGTAGCTTCTATTGGACATTCTTGTGTGAAATCTTTAGATTTGCTTTCTCAGTTTATGAGTTATAAGGTTAATGGTCTTTGTCCTGATGATTGGAGTCTTGGGCAGAAGCTGATTCTTAGTGGCTGTGAGCCTTTGCCAAGAAGGAGGTGTTTTGCTAAGACAATACCTAAGGTTGGTTTACTTAAATTACCTGATTCATTTTGGGGAAATTATAGTGAAAAGATTTATAGTTGGAGTGGTCTTGGTTGTAAGAATGTAGCTTGTTTAAATGTTAAGAAATTGAATAGAGATTGTGCTGGTTGTTTTGATGTTGTAAGTAGTGGGGGGTATGAGAAGCAAAGATATGTTAAGGGTAGAGGGAAAAATGATTTCTTGATTGATGATGTATTGGGAATGCTGGGAAATGGTGGGGGAATTAGAATTGGATTTGATATTGGTGGTGGATCTGGTACATTTGCTGTTAGAATGGCTGAAAGGAATGTGACTATAGTTACTGCTACGTTGAATGTCGATGCACCATTTAACGAGTTCATTGCTGCACGGGGTGTATTCCCGTTGTATTTGAGTTTAGATCATCGGTTTCCCTTTCATGATAATGTGTTTGATTTGGTACATGTGGGAAATGTATTGGATGTGAGCGGACGTCCTGAGAAGTTAGAGTTTTTAGTGTTTGATATTGATAGAGTTTTGAGGGCTGGAGGGTTGTTTTGGTTGGATAACTTTCTTTGTTCAAATGAAGACAAGAAAACTGCATTAACGAGGCTGATCGAACGTTTTGGGTACAAAAAGCTTAAATGGGTTGTTGGTGAGAAGATCAATGGGTCGGGAAAATCTGAGGTTTATTTGTCTGCTGTTCTACAGAAACCAGTAAGAGTTTGATCGTATCGCGGGGTTTCTCATAGAAAAGCTGTGCATGTTCATTATTGACATAGAATAAGTGAACGTATTCGTCTTCTTTTACACAACTGCTAACCAGCATCATAGGAGGGAGGCGGGTTCGGCTTTGTGGCAGGTATTATATGTCTACGATCTCTAAGATTATTCACTTATCTTTGG</genome_strand>
        <mrna_strand>TTATTTTCACTGATTTAGTTGCTTAGTTCTACTACAATCATAAAGTGAAGCAGCCAGCATCGAAAATCTGTTTGTTTTGAGCAAAAAATGGGATCTGTTTCTTTGAAAATAGGTGATGGAACTGCTAGATTCAAGAAAGCTACATATTGTTCTTCAGTTCTAAATCTACTTATGCTTTTCTCTGTTGTTACAACTAATCTTTTTGCTTTATATGCTTTTACATCCTCACCCAAAAACCCCCATCATCATCTTCTTCTCCCACATACTCACAAGAACATATCTTTAATCTCAGAACAAGTTTCTTTAATTCTAAGACAGATTGATTCTTCACAAAAAAAACTTGCCCAAATGGAAAAAGAGCTTTTAGGCTATGAAAGTTTTGATCTTTCTAGTCCCAAAGTTCCAAATGAAGTGAGAAATTTCTTGCAACCCCATTTGCTGCCTTTGGGTAAAGATTCAAGAACTGGGATTACTGAAATGGTAGCTTCTATTGGACATTCTTGTGTGAAATCTTTAGATTTGCTTTCTCAGTTTATGAGTTATAAGGTTAATGGTCTTTGTCCTGATGATTGGAGTCTTGGGCAGAAGCTGATTCTTAGTGGCTGTGAGCCTTTGCCAAGAAGGAGGTGTTTTGCTAAGACAATACCTAAGGTTGGTTTACTTAAATTACCTGATTCATTTTGGGGAAATTATAGTGAAAAGATTTATAGTTGGAGTGGTCTTGGTTGTAAGAATGTAGCTTGTTTAAATGTTAAGAAATTGAATAGAGATTGTGCTGG-T-TTTTGATGTTGTAAGTAGTGGGGGGTATGAGAAGCAAAGATATGTTAAGGGTAGAGGGAAAAATGATTTCTTGATTGATGATGTATTGGGAATGCTGGGAAATGGTGGGGGAATTAGAATTGGATTTGATATTGGTGGTGGATCTGGTACATTTGCTGTTAGAATGGCTGAAAGGAATGTGACTATAGTTACTGCTACGTTGAATGTCGATGCACCATTTAACGAGTTCATTGCTGCACGGGGTGTATTCCCGTTGTATTTGAGTTTAGATCATCGGTTTCCCTTTCATGATAATGTGTTTGATTTGGTACATGTGGGAAATGTATTGGATGTGAGCGGACGTCCTGAGAAGTTAGAGTTTTTAGTGTTTGATATTGATAGAGTTTTGAGGGCTGGAGGGTTGTTTTGGTTGGATAACTTTCTTTGTTCAAATGAAGACAAGAAAACTGCATTAACGAGGCTGATCGAACGTTTTGGGTACAAAAAGCTTAAATGGGTTGTTGGTGAGAAGATCAATGGGTCGGGAAAATCTGAGGTTTATTTGTCTGCTGTTCTACAGAAACCAGTAAGAGTTTGATCGTATCGCGGGGTTTCTCATAGAAAAGCTGTGCATGTTCATTATTGACATAGAATAAGTGAACGTATTCGTCTTCTTTTACACAACTGCTAACCAGCATCATAGGAGGGAGGCGGGTTCGGCTTTGTGGCAGGTATTATATGTCTACGATCTCTAAGATTA-TCACTTATCTTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U332943" ref_strand="+" ref_description="SGN-U332943        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:12587406-12588456 FORWARD | Aliases: None(evalue: 7e-76, score=280) genbank/nr: gi|15144515|gb|AAK84482.1| unknown [Lycopersicon esculentum](evalue: 5e-123, score=443)">
      <seq>attttctttcttttagaattctagtaagttcttttctaacaagaattttagtaagttcttttataacacgttatcagcacgaaattgctacttgcaaaggtactatataaatatttttatttaattcacatattctctcataattttcattatgtcgaatttatccaaacttgagtttgtggcattagatatttctggaaagaattatctttcatgggtactcgatgctgagattcacttggctgctaaaggtcttgatgccactattactcagggaaatgaagcatcgagtcaagataaggcgaaggctatgattttccttcgtcatcatcttgatgagggcctgaagattgaatatctgacagtgaaagatccacttgaattgtggactgatttaaaggggagatatgaccacctaaaggcaacagtgttgccaagagctcgttatgagtggatgcatttacggtttcaagattttaagaccgtaattgaatacaactctgctgtattcaggataacctcccagttgaaattatgtggggagactataaaagatgaggacatgttggaaaagacacttactacttttcatgcctcgaatgtgatattgcagcagcaatatcgtgaaaagggttttcagaaatattctgaactaatctcatgtcttttggtggctgagcaacataatgctcttttaatgaaaaatcatgaagctcgtcccactggagctgctccattaccggaggcaaatgcggtggaagcacgtgatcaatctgaagtaaaaagaaatgatcatcggggatataataatgcacggggacgtggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="85053" stop="86423"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85361" g_stop="86123" g_length="763"/>
          <reference_exon_boundary r_type="cDNA" r_start="65" r_stop="828" r_length="764" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U332943" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>763</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U332943" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85361" e_stop="86123"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTGATTCACATATTCTCTCATAA-TTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGATTTCAAGATTTTAAGACCGTGATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGAGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTTTGAACTAATCTCATGTCTGTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGTGGTGGAAGCACGTGATCAATCTAAAGTAAAAAGAGATGATCATGGGGGATATAATAATGCACGGGGACGTGGCAA</genome_strand>
        <mrna_strand>AACACGTTATCAGCACGAAATTGCTACTTGCAAAGGTACTATATAAATATTTTTATTTAATTCACATATTCTCTCATAATTTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAGGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACAGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGGTTTCAAGATTTTAAGACCGTAATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGGGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTTCATGCCTCGAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTCTGAACTAATCTCATGTCTTTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGCGGTGGAAGCACGTGATCAATCTGAAGTAAAAAGAAATGATCATCGGGGATATAATAATGCACGGGGACGTGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U339613" ref_strand="+" ref_description="SGN-U339613        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: Integrase,(evalue: 1e-44, score=182)">
      <seq>acgaatttgctacttgcatagaaatctccaattgtcagttggattcaagatgagtaatggagatgtatacctttttcatagtgctactacacatacaatattaaaagaaaagaaaagaaatacttttctaatttggttatgaaaatgacatatgtcaacacaatatcaggtagtacaaaattaattgagagctctggaagagcgaccttattacaacctggagagacaatattggacatttgtaatgcattataccgtagtaagtcacaaagaaacttattaagtttcagagtaattcgccaaaatggctatcacgttgagacgactaatgaaggaaaggatgaatgcctttacattactacaattaatgtacagaagaaaattgtgcatgaaaaattacgtgcattttcttctaggttctactatacaagtgtaagtacagttgaatcacatgtcgtagtaaacaaaaggtttactaattttaatgattctattatttggtatgaccggttgggccatcccggatttaatatgatgcacagaatcattgagaattcacgtgggcacacctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="86353" stop="87502"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86657" g_stop="87202" g_length="546"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="572" r_length="551" r_score="0.905"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U339613" ref_strand="+">
        <total_alignment_score>0.905</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="0.955" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339613" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86657" e_stop="87202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATCCCCAGTTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATGCCTTCTTGATAATGCTACAACGCATACAATATTAAAAGAAAAG---A-A-ATACTTTTCTAATTTGGTTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTCGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</genome_strand>
        <mrna_strand>AAATCTCCAATTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATACCTTTTTCATAGTGCTACTACACATACAATATTAAAAGAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGACATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGAGCTCTGGAAGAGCGACCTTATTACAACCTGGAGAGACAATATTGGACATTTGTAATGCATTATACCGTAGTAAGTCACAAAGAAACTTATTAAGTTTCAGAGTAATTCGCCAAAATGGCTATCACGTTGAGACGACTAATGAAGGAAAGGATGAATGCCTTTACATTACTACAATTAATGTACAGAAGAAAATTGTGCATGAAAAATTACGTGCATTTTCTTCTAGGTTCTACTATACAAGTGTAAGTACAGTTGAATCACATGTCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTCTATTATTTGGTATGACCGGTTGGGCCATCCCGGATTTAATATGATGCACAGAATCATTGAGAATTCACGTGGGCACACCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U339612" ref_strand="+" ref_description="SGN-U339612        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: Integrase,(evalue: 9e-34, score=146)">
      <seq>ttttctaatttggttatgaaaatggcatatgtcaacacaaaattaattgagggctctggaagagcgaccttattactacctggagggacaatattaagcattgataatgcattatattgtagtaagtctcaaagaaacttattaagtttcaaagttattcgccaaaatggctatcatgttgagacggctaatgaaggaaaggttgaatacctttacattactacaattaatgttgagaagaaaattgtgcatgaaaaattacctgcattttcttctgggttgtactatacaagtataagtacagttgaatcacatgccgtagtaaacaaaaggtttactaattttaatgattttatcatttggcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="+" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="86454" stop="87435"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86767" g_stop="87135" g_length="369"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="+" ref_id="SGN-U339612" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>369</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339612" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86767" e_stop="87135"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTCGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</genome_strand>
        <mrna_strand>TTTTCTAATTTGGTTATGAAAATGGCATAT--GTCAACACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTTGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U318979" ref_strand="-" ref_description="SGN-U318979        Tomato 200607 #1 [14 ESTs aligned] arabidopsis/peptide: AT4G23160.1 | Symbol: None | protein kinase family protein, contains Pfam domain PF00069: Protein kinase domain | chr4:12129496-12134198 FORWARD | Aliases: F21P8.50, F21P8_50 (evalue: 1e-64, score=244) genbank/nr: Integrase,(evalue: 0, score=853)">
      <seq>ttttttttttttttttttttttttttttttccaaaaaaaaaaaaaatattaaaaaatatatcatttcaaagtgtgtgtttatatgtttcatatagtggctatttatagccatacattaatgcatacaaggtcattagtgatgtcatattccacatgacactacaattattttacactacaattattttacaacactcccccttggatatctatgtaaaagaaagtacatagatatacataatacgctttatttgctgcctcattaaaaaccttaccaggaaaacccaacttgggacaaaaccatagttaaggaaaagagtacaacgcgtatttcactccccctgatgaaaactttacttgatatcttggagacggcgcattccaatcttgtatctcaacttctcaaacgttgatgttggcaatgcctttgtgaataaatcagcaagattatcacttgaacgaatttgttgaacttctatctcaccattttgttgaagatcatgcgtgaaaaagaactttggtgagatatgctttgtccggtctcctttgatgtatcctcctttcaattgagctatacatgcagcattatcttcgtacattgtggttggtatattctttttcaaagaaaaaccacacatttcctgaatatgatgggtcattgatctcaaccagacgcactctcgacttgcttcatggatggctattatttctgcatgatttgaagaagtggctaccaacgtttgcttcattgatcgccaagatattgccgtgtctccacatgtaaacaaatagcctgtttgtgatcgggctttatgcggatctgataaataccctgcatctgcgtaaccaatcagttctgatttggattcattggaatagaataaacccatgtccatggtccctcgaagatatcgaagtatgtgtttaacaccattccaatgtctttttgttggggaggaactgaatcttgccagtagacttactgcaaaacagatatctggtcgagtattgttagcaaggtacattagtgccccgatcgcactaagataaggagtttcatcaccaagaagctcttcatcattctcttgaggtcgaaatggatctgtattgatgtcaagcgatcttaccaccattggagtactcaatggatgtgagttatccatgtaaaaacgctttagtatcttttctgtgtacgttgattgatgaacaagtattccatttgacaaattctcaatctgtaggccaagacaaaattttgtcttgccgagatctttcatttcaaattcttttttcagacactcaatagcttctaaaagctctttaccagtgccaatgatgttcaaatcatcaacatacacagctattattacaaattcagaccccgaccgtttaataaaaatgcagggacaaatcgggtcatttttgtaccctttctttaacaaatattcactcagacgattgtaccacatccttcctgattgtttcaatccatacagagatttctgaagttttattgaacaagtttctcttgaatctttgtatgcttcaggaactttgaatgcttcaggaattttcatgaaaatgttgtggtccaatgagccatatagataggctgtgacaacgtccattagacgcatttcaagtttttcatgaactgccaaatttatgagatatctgaaggtgattgcatctaccactggagaatatgtctccatataatcaatgccaggtctttgagaaaaaccttgagcaacgagtcgggccttatatctcatgacttcatctttctcatttcttttccgtacaaaaacccatttgtaccccactggcttgataccttcaggtgttcggattatcggtccaaaaacttcacgtatttctagtgaagccaattcagcttgaattgcatccttccattttggccaatcatttctctgtctacattcgtgaacagattttggctcaaaatcttcatattgttgcattattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="90529" stop="88213"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90367" g_stop="90325" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="215" r_length="43" r_score="0.744"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90324" i_stop="90266" i_length="59">
            <donor d_prob="0.000" d_score="0.74"/>
            <acceptor a_prob="0.000" a_score="0.76"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90265" g_stop="88513" g_length="1753"/>
          <reference_exon_boundary r_type="cDNA" r_start="216" r_stop="1990" r_length="1775" r_score="0.950"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="30" polyA_stop="1"/>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U318979" ref_strand="-">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>1796</cumulative_length_of_scored_exons>
        <coverage percentage="0.903" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318979" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="90367" e_stop="90325"/>
          <exon e_start="90265" e_stop="88513"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATCCAATGGATTTATAACACTTCCCCTTGGATGTCCATAGATTATGTGCCTCGTTAAAACCTTACTAGGAAAAACCCAGTGGGAAAAAGCCTAGTGAAGGAAAAAGAGTACACATATCT-CATAATACGCTTTGAATGTTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCGCTCCCCCTGATGAAAACTTTACTTGATATCTCGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAATGTTGATGTTGGCAATGCCTTAGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCCGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCGTACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACATTTTCTGAATATGAT-GG-----G---T----------CA-T-TCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAATGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGTCTGTTTGTGATCGAGCTTTATGCGGATCTGATAAATACCCTGCATCTGCGTAACCAATCAGTTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAAGATATCGAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCGAGTATTGTTAACAAGGTACATTAGTGCCCCGATCGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGTCAAGAGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACAAGTATTCCATTTGACAAATTCTCAATCTGTAGACCAAGACAAAATTTTGTCTTCCCGAGATCTTTCATTTCAAATTCTCTTTTCAGACACTCAACAGCTTCTAAAAGCTCTTTACGAGTTCCAATGATGTTCAAATCATCAACATACACAGCTATTATTACAAATTCAGACCCCAACCGTTTAATGAAAATGCAGGGACAAATCGAGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTCAAACGATTGTACCACATCCTTCCTGATTGTTTCAGTCCATACAGAGATTTCTGAAGCTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGTTTCAGGCACTTTAAATGCTTCAGGAATTTTCATGAAAATGTTGTGGTCCAATGAGCCATATAGATAGGCTGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATAAACTGCCAGATTTATGAGATATCTAAAGGTGATTGCATCTACCACTGGAGAATATGTCTCCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCACCTTTCTCATTTCTTTTTCGTACAAAAATCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATTGGTCCAAAAACTTCACGTTTTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATCATTTCTCTGTCTACATTCGTGAACAGATTTTGGCTCAAAATCTTCATCTTGTTGCATTATTT</genome_strand>
        <mrna_strand>ACACTACAATTATTTTACAACACTCCCCCTTGGATATCTATGT...........................................................AAAAGAAAGTACATAGATATACATAATACGCTTTATTTGCTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCACTCCCCCTGATGAAAACTTTACTTGATATCTTGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAACGTTGATGTTGGCAATGCCTTTGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCCGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCGTACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACATTTCCTGAATATGATGGGTCATTGATCTCAACCAGACGCACTCTCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAACGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGCCTGTTTGTGATCGGGCTTTATGCGGATCTGATAAATACCCTGCATCTGCGTAACCAATCAGTTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAAGATATCGAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCGAGTATTGTTAGCAAGGTACATTAGTGCCCCGATCGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGTCAAGCGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACAAGTATTCCATTTGACAAATTCTCAATCTGTAGGCCAAGACAAAATTTTGTCTTGCCGAGATCTTTCATTTCAAATTCTTTTTTCAGACACTCAATAGCTTCTAAAAGCTCTTTACCAGTGCCAATGATGTTCAAATCATCAACATACACAGCTATTATTACAAATTCAGACCCCGACCGTTTAATAAAAATGCAGGGACAAATCGGGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTCAGACGATTGTACCACATCCTTCCTGATTGTTTCAATCCATACAGAGATTTCTGAAGTTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGCTTCAGGAACTTTGAATGCTTCAGGAATTTTCATGAAAATGTTGTGGTCCAATGAGCCATATAGATAGGCTGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATGAACTGCCAAATTTATGAGATATCTGAAGGTGATTGCATCTACCACTGGAGAATATGTCTCCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCATCTTTCTCATTTCTTTTCCGTACAAAAACCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATCGGTCCAAAAACTTCACGTATTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATCATTTCTCTGTCTACATTCGTGAACAGATTTTGGCTCAAAATCTTCATATTGTTGCATTATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-THf7Ff/lycopersicum_combined_unigene_seqs" ref_id="SGN-U322562" ref_strand="+" ref_description="SGN-U322562        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: | Symbol: None | short vegetative phase protein (SVP), identical to cDNA short vegetative phase protein (SVP) GI:10944319; | chr2:9586957-9590966 FORWARD | Aliases: F14M13.6, F14M13_6, AT2G22550(evalue: 2e-80, score=295) genbank/nr: gi|17433048|sp|Q9FUY6|JOIN_LYCES MADS-box JOINTLESS protein (LeMADS) gi|9964074|gb|AAG09811.1| MADS-box transcription factor JOINTLESS [Lycopersicon esculentum](evalue: 6e-115, score=398)">
      <seq>aaaaaaaaaactcctaatggctagagaaaaaattcagatcaagaaaatagataactccacagcaagacaagttacattttcaaagaggagaagaggtttattcaagaaagctgaagaactttctgttctctgtgatgctgatgttgctctcatcattttctcttctactggaaaattatttgactattctagctcaagcatgaaacaaattcttgagaggcgtgatttgcattccaaaaatctggaaaaattggatcaaccatcacttgaacttcagcttgtagaaaatagcaactactccagattaagcaaggaaatttccgaaaaaagtcatcgattaaggcaaatgaggggagaagaacttcaaggactaaatattgaagagttgcaacaattggagagatctcttgaaactggattgagccgcgtcatagagagaaagggtgataaaataatgagagagatcaaccaactccaacaaaagggtatgcatctaatggaagaaaatgaaaaattaaggcaacaggtgatggagatatctaataataataataataataataatggatatagagaggcaggagtagtaatatttgaaccagaaaatggatttaataataataataatgaagatggccaatcatctgaatcagtaacaaatccatgtaactcaattgatcctcctcctcaagatgatgatagttctgatacttctctcaaattggggctaccttactcaggctgaagagatcaaaagcaaggtgtggctatttttgtatgttattagaagaaggagaaaaaaaaaagtaactactaattattataattaattaatgtctgattaatgtaaaagctaaccccaaaaatttcatattatgtatgtaattggtgtattaatctcatgtattcgtctcccatagtttatataaatattattgttagtatctattaacttaattaactagcactaataatcttttataattgaactttgtgacttgtaactatataaaggcttaattatttaattatttgacttttttctgttgctgtaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0107K14-LBHZJ/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C11HBa0107K14.1" temp_strand="-" temp_description="C11HBa0107K14.1  AC212435.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0107K14 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="96729" stop="90973"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96444" g_stop="96247" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="198" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96246" i_stop="93686" i_length="2561">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.515" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93685" g_stop="93607" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="277" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="93606" i_stop="93529" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="93528" g_stop="93464" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="342" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="93463" i_stop="93262" i_length="202">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.541" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="93261" g_stop="93162" g_length="100"/>
          <reference_exon_boundary r_type="cDNA" r_start="343" r_stop="442" r_length="100" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="93161" i_stop="93025" i_length="137">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="93024" g_stop="92983" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="484" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="92982" i_stop="92877" i_length="106">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="92876" g_stop="92835" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="485" r_stop="526" r_length="42" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="92834" i_stop="92559" i_length="276">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="92558" g_stop="92359" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="726" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="92358" i_stop="91603" i_length="756">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="91602" g_stop="91265" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="727" r_stop="1064" r_length="338" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0107K14.1" gen_strand="-" ref_id="SGN-U322562" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>1064</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0107K14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U322562" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96444" e_stop="96247"/>
          <exon e_start="93685" e_stop="93607"/>
          <exon e_start="93528" e_stop="93464"/>
          <exon e_start="93261" e_stop="93162"/>
          <exon e_start="93024" e_stop="92983"/>
          <exon e_start="92876" e_stop="92835"/>
          <exon e_start="92558" e_stop="92359"/>
          <exon e_start="91602" e_stop="91265"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>NNNNNNNNNNNNNNNAATGGCTAGAGAAAAAATTCAGATCAAGAAAATAGATAACTCCACAGCAAGACAAGTTACATTTTCAAAGAGGAGAAGAGGTTTATTCAAGAAAGCTGAAGAACTTTCTGTTCTCTGTGATGCTGATGTTGCTCTCATCATTTTCTCTTCTACTGGAAAATTATTTGACTATTCTAGCTCAAGGTACATATCCATCATTTTTTCTTTCATTTACCTAATTATAACGACAGCAACATACTCAGTGAAATTCCGGGACCCGAAAAGAATAGTAGGTGTATGTAAAATCACCTAATTATCCTTATTTTTTGTTTGTGGTAGCTAGATTAGTTGTTTTCTAGACTAAAAAAAAGAAATTGGGAATAATTTTTGATTAGTTATTAAATAATAACGTATTTAGTAAAATTTTAGAAATGAATTTTGAGTAAAGTGATGTGTATGTGTATTTTATCTATAGGGTAGAGAGGTTTTTTCCGATGAATTTTAGGGCTAATTTAACAAGTGAAAATTAAAGTAATGATTTTTGTTAATTTTTTGTGAGGAATGAAGTTTTTTTTTTTTTTTTGGGTATTTTCTAAATGGGTGACTTTAGTTAGTCATGATTGAGGAGAATGATTAGAATTATTGAGTTTTGGATTTTTGTAAATATAGTTTATTAATTAATTATTATATTAAATGGATTTTTAGGTATAAATTTAGGGTTTGATTTTAAGTTATTGAGTTTTGTTGAATTCTTAGGAAAAGTTCTTCGCTGTTGTTTACAAATGGGTGTCTTTAAGCTAGTCATGATTGACAAGAATTATATCGAGTTATTTAAATTCTGAAAGAAGATTTTGATAAATTGTTTATATATGTAAAAAGTGAGATTTTATAATATAAATTTAAAAATTTGATCAAAAGCTATTAGATTTCATCGTGCCCGCATACAAATCTCTTCTCTATTATTTAACAAGTTATGTGCACTGATAATATTACTAATATACTTTAATTTGTTATAATACCAATTAAGTTACATAGTTTAATTTGTGTAGAAGTTAAGTTACTACTTTTGTCAAGTAATTTACTTATTAATTACTACATGGTTTTCACATAACATAAACACTTGCTATATTTAGCAACTATTGAGAAACCCACCTCAAGAAACTTTCTATTTTGTGTCATTTATTGACTCTTTTTTTTAGGTAAATAATTAATGAAAAAAACTTGAATTTTGTATTAGAAAACAAAGCTTCTAAAGACTCAATTTTTATTTAAAAAGGAATCAGAAAAAATGGAGAATAAACAATAATACCAACACAAAATGAGTGGTGTAGGAAGTAGTTAGTAGTTACCAGGTTATAAGAATTTTATGTTGTTTAAATTCTTCAAAAATATTATTACATTATATTAGATCATTTTATAACATGTAGTAATTTTTGATGATTTGATGTGTCAATGTAAATTTTATTCTTTTGGATTGAAAATATATATTTTCGCACACAATGACATTATTAAAGGATTCACAGAATATATATGTCAATTTCATTTATGAAATTCAAAAATTTTGTTACATTATTAATTAAATTGACTTGTAATAACAAATAATATTTTAAAGCTTAGATAGAACAATAAAAAAATAAAAGGGAATAAATTTAGCTGGATAATGTTATCGAAAGGGCCACCATATCTTATCTGTTTCACAGAAAGGCAATAATATTATATCTTATAATATAAAAATAAATATTATCATGGGAACTATATATTTATGGTGAATAGGACAAACTCCTTTTAATGGGGAAAAAAAGAAGCATATTTTAGGAATTTTATGTTTTTTTTTTGTATGGTATAAGTAAAAAGTAACAAATTTGATGAGCTATTTTTTTGAGGTGGTTGTGTGTGGTATATAAAATAATTGTTTTCCCCCTCTACAAGTAAATGTTTTAAGAAAGCTATAATGAACTCTCTTCATTCGGTATTGTTTGTCATAATTTTTATTTTTAGAGTTAAATTATGAAAATTTTGACTTACATTTTAAGATGTATTTTTTAATCATATTAATATGTAAAAAATTGTAATTTATAGTATTTTCCATATAATTTTAGGATATCTAATTTTTTTGTTTAAAATATCGAATTAATCTGATCTAATTTACCTTTGAAAATTAATCAAGTGACTTTAGATAAGTGCATCATGATAAACAATTCCGGACGAAGGGTGTATAATTAATCTACATTTTAATAATTTGATTTTTTTTTTATAATTCACTTATTTATCATCCTCGATATTTAAGCTTATTGAGTGTGTCATATATCAAAGATTAATAGATCGTCTTTTTATAGTCTTGAATAATCTTATACTTCATAGGTTTATTACTTTTGAAGTTGAGTCAGACTTATCCTTAGCTATTAGTATTATGTCGTTAAGTTGATAGGCCTGCTCGAATGGGGAAGAGGTGTTATCTATCCCACATTAGTTGACGGATGAGTTGTTTATGTCGGTGTTAAGCAATATTTTTCATTTGAGATTGAGTTAGATCTAAAGTCAATTTTCTCGACAGAAATTACAAATTTGTCTTTTACTTTCTTTGATGTTGTGTTCATGTGTCCCTAATATATTGGATACATGACACATACATACATTCTTCAAAGGAATTTAATATTTATGTATGTATCGACATCATAATTGATCACATAAAAGATAACTATATATAATTCTACCGTTCATCAATGATTTACGTACGATCTTAATATTTTTAATTTCTCATGAAGCATGAAACAAATTCTTGAGAGGCGTGATTTGCATTCCAAAAATCTGGAAAAATTGGATCAACCATCACTTGAACTTCAGGTAATTAATTCATTTATTTAATCCTTAATTACATTTTAATTAGTTTTTAAACAAATATTTTGTTTATTTTGTTTGCAGCTTGTAGAAAATAGCAACTACTCCAGATTAAGCAAGGAAATTTCCGAAAAAAGTCATCGATTAAGGTATATTTATAGTTACATTTGAAATCGACTATATGTATTCTCACTGTTCTTTTTAGTTCAATTCATAATATCCATCATCACATACGTCAAACAAAAGTAAAAGAGAGACAAGTTAATTTATATATATATATATATATATATAAAAAATTACGATAATAATAATAATATTAGAAGTTCTCTAACAAGTAGCATCGATTAACAGGCAAATGAGGGGAGAAGAACTTCAAGGACTAAATATTGAAGAGTTGCAACAATTGGAGAGATCTCTTGAAACTGGATTGAGCCGCGTCATAGAGAGAAAGGTCGGGATTTAACTTATATATATTGACATTATAAAATATATTTTATGTTATTAGTGTAATTTAATATGTCGTAACAAGTTATAATCGATTTTTCCCCTTTTTAATATCTTACACAACTTACGTTATCCATGTATCAGGGTGATAAAATAATGAGAGAGATCAACCAACTCCAACAAAAGGTTAGGAACAATATCGTTTAAGTGATCTGGTAGTGTATAATTTTTGTATCGCAATTTTACTTGGTTTTCATCGACGCTGATAATTGTTATTGTGAAAAATCAACAGGGTATGCATCTAATGGAAGAAAATGAAAAATTAAGGCAACAGGTATGCAAATTTTTTAACGAATGAGATAAAAATTGATTATTTTACTATAATTTTAGATAGCCGGTGATTACTGAAATCTCCGAGACATCAGGTTGAAATTTCAATAAAATCTATGAATTTGTAGATGATTTTTTCCTATTTCCGAAATCTCCGAAAAACTTAAGCTTTTTAAAATTAACTTTTTTATGGATACACTTGGAGTATCTAAATTATTCAAGACTTCAATAATTATGTTATTAAATGTTATCGTTGATATATATTTTTAATTTTTTTTAGGTGATGGAGATATCTAATAATAATAATAATAATAATAATGGATATAGAGAGGCAGGAGTAGTAATATTTGAACCAGAAAATGGATTTAATAATAATAATAATGAAGATGGCCAATCATCTGAATCAGTAACAAATCCATGTAACTCAATTGATCCTCCTCCTCAAGATGATGATAGTTCTGATACTTCTCTCAAATTGGGGTTAGTACTTTAATTCTTTCTTCTTCTTTTTTCCGGTCTCGTTTCGATCTCGTTTCGTATGAAAGATAAAAGAAATTATTAATTTCAATTTTAATTTTGTGAAGAAATAATCTATTTTGAATTGTTGTGTTGTTTGTTTTTAATACTGAAGGCGGAATAATGATTTTTAGAGAACTTATCCTAGAATTATTTTGAGATAACTTATTTTCCGTTCAAACGAATTGTGGTCGTGAAAAAATATTCGTTTATCAATACACTATTGGTAAATTGTATATCAAGTATCTACCTTCTGAAGGTGTTGCATACATATTACCCTTTTTAAACTTTACTTCGGTATCATGTTATTGTATATTGTTTATGTAAAGGGACAACAAAAGTTAGGGGCTAATCGAGTTCAGTAATTTTGACTCAAATATGATATTTGTGGGTTAAATTTTTTTATGAATATTTTATTATCGAAAGTAGAAGTCTTTGTACGGATTTGAATGAACCAAATATCTTTAGTTCATATCTTTGTATTGGTATTTAGAATACTCATAAATATGTACATTTTTTTTTTAATTCAAAACCTCGTTACTAACCCTTGATGTTGTTATCTTAAAATTTAGAACGTATACGTAATATTTAAATTTCAACTCTGTTCTATAGGTTCACCTTCATGTTCTAAATTTATAACCCATAATACATAAATTTAAAATTCTGAGTCCGTTTCTGATATTATATTTTTTTTCATCTTATTTGTTTTTTAAATGTCAGGCTACCTTACTCAGGCTGAAGAGATCAAAAGCAAGGTGTGGCTATTTTTGTATGTTATTAGAAGAAGGAGAAAAAAAAAAGTAACTACTAATTATTATAATTAATTAATGTCTGATTAATGTAAAAGCTAACCCCAAAAATTTCATATTATGTATGTAATTGGTGTATTAATCTCATGTATTCGTCTCCCATAGTTTATATAAATATTATTGTTAGTATCTATTAACTTAATTAACTAGCACTAATAATCTTTTATAATTGAACTTTGTGACTTGTAACTATATAAAGGCTTAATTATTTAATTATTTGACTTTTTTCTGTTGCTGTAAATTTAAATA</genome_strand>
        <mrna_strand>AAAAAAAAAACTCCTAATGGCTAGAGAAAAAATTCAGATCAAGAAAATAGATAACTCCACAGCAAGACAAGTTACATTTTCAAAGAGGAGAAGAGGTTTATTCAAGAAAGCTGAAGAACTTTCTGTTCTCTGTGATGCTGATGTTGCTCTCATCATTTTCTCTTCTACTGGAAAATTATTTGACTATTCTAGCTCAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CATGAAACAAATTCTTGAGAGGCGTGATTTGCATTCCAAAAATCTGGAAAAATTGGATCAACCATCACTTGAACTTCAG..............................................................................CTTGTAGAAAATAGCAACTACTCCAGATTAAGCAAGGAAATTTCCGAAAAAAGTCATCGATTAAG..........................................................................................................................................................................................................GCAAATGAGGGGAGAAGAACTTCAAGGACTAAATATTGAAGAGTTGCAACAATTGGAGAGATCTCTTGAAACTGGATTGAGCCGCGTCATAGAGAGAAAG.........................................................................................................................................GGTGATAAAATAATGAGAGAGATCAACCAACTCCAACAAAAG..........................................................................................................GGTATGCATCTAATGGAAGAAAATGAAAAATTAAGGCAACAG....................................................................................................................................................................................................................................................................................GTGATGGAGATATCTAATAATAATAATAATAATAATAATGGATATAGAGAGGCAGGAGTAGTAATATTTGAACCAGAAAATGGATTTAATAATAATAATAATGAAGATGGCCAATCATCTGAATCAGTAACAAATCCATGTAACTCAATTGATCCTCCTCCTCAAGATGATGATAGTTCTGATACTTCTCTCAAATTGGG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTACCTTACTCAGGCTGAAGAGATCAAAAGCAAGGTGTGGCTATTTTTGTATGTTATTAGAAGAAGGAGAAAAAAAAAAGTAACTACTAATTATTATAATTAATTAATGTCTGATTAATGTAAAAGCTAACCCCAAAAATTTCATATTATGTATGTAATTGGTGTATTAATCTCATGTATTCGTCTCCCATAGTTTATATAAATATTATTGTTAGTATCTATTAACTTAATTAACTAGCACTAATAATCTTTTATAATTGAACTTTGTGACTTGTAACTATATAAAGGCTTAATTATTTAATTATTTGACTTTTTTCTGTTGCTGTAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>19</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="293" PGL_stop="753"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="293" e_stop="753"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.974"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.974">
            <gDNA_exon_boundary e_start="293" e_stop="753" e_length="461"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="293" stop="753"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345380" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTCTTAAGTAATATGAGGCATCCTCATATGCTATCGATGATCGGATATTGCTCTGAGCTAAGGTGCATCGTGTTCGAGTATATGCACAATGGTTGCTTAAGAGACATTCTCTTCTCAGGCACCAGAGGCTCTAAAAGGAGGAATAAGGGCCTAAACTGGCAAGCTAGGATATGTATTGTAGCCAATGTCTGTACTGGCTTGTGCTTCCTCCATCATGCCAAGCCAACGCCCGTGGCTCATGGCAACCTGAACCCTTCAAAAATCCTTCTTGATCATAACTATATGGCGAAAATCCATGGTGTTAGGACACCTCTGTCATGTGACAGATCGAATATGAGATCAGATATCCGGGCTTATGGGAACTTAGTCTTACAGATTCTGACTGGAAGAAACTGGGCGGGGTTGGTTGAGGAGGCGATTATGATGGACCAGAGTAAGCTTATTGAAGTGCTTGATCCGAT</gDNA_template>
            <first_frame> F  L  S  N  M  R  H  P  H  M  L  S  M  I  G  Y  C  S  E  L  R  C  I  V  F  E  Y  M  H  N  G  C  L  R  D  I  L  F  S  G  T  R  G  S  K  R  R  N  K  G  L  N  W  Q  A  R  I  C  I  V  A  N  V  C  T  G  L  C  F  L  H  H  A  K  P  T  P  V  A  H  G  N  L  N  P  S  K  I  L  L  D  H  N  Y  M  A  K  I  H  G  V  R  T  P  L  S  C  D  R  S  N  M  R  S  D  I  R  A  Y  G  N  L  V  L  Q  I  L  T  G  R  N  W  A  G  L  V  E  E  A  I  M  M  D  Q  S  K  L  I  E  V  L  D  P   </first_frame>
            <second_frame>  S  *  V  I  *  G  I  L  I  C  Y  R  *  S  D  I  A  L  S  *  G  A  S  C  S  S  I  C  T  M  V  A  *  E  T  F  S  S  Q  A  P  E  A  L  K  G  G  I  R  A  *  T  G  K  L  G  Y  V  L  *  P  M  S  V  L  A  C  A  S  S  I  M  P  S  Q  R  P  W  L  M  A  T  *  T  L  Q  K  S  F  L  I  I  T  I  W  R  K  S  M  V  L  G  H  L  C  H  V  T  D  R  I  *  D  Q  I  S  G  L  M  G  T  *  S  Y  R  F  *  L  E  E  T  G  R  G  W  L  R  R  R  L  *  W  T  R  V  S  L  L  K  C  L  I  R  </second_frame>
            <third_frame>   L  K  *  Y  E  A  S  S  Y  A  I  D  D  R  I  L  L  *  A  K  V  H  R  V  R  V  Y  A  Q  W  L  L  K  R  H  S  L  L  R  H  Q  R  L  *  K  E  E  *  G  P  K  L  A  S  *  D  M  Y  C  S  Q  C  L  Y  W  L  V  L  P  P  S  C  Q  A  N  A  R  G  S  W  Q  P  E  P  F  K  N  P  S  *  S  *  L  Y  G  E  N  P  W  C  *  D  T  S  V  M  *  Q  I  E  Y  E  I  R  Y  P  G  L  W  E  L  S  L  T  D  S  D  W  K  K  L  G  G  V  G  *  G  G  D  Y  D  G  P  E  *  A  Y  *  S  A  *  S  D </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="293" stop="751"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>459</number_coding_nucleotides>
                  <number_encoded_amino_acids>153</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FLSNMRHPHMLSMIGYCSELRCIVFEYMHNGCLRDILFSGTRGSKRRNKGLNWQARICIVANVCTGLCFLHHAKPTPVAHGNLNPSKILLDHNYMAKIHGVRTPLSCDRSNMRSDIRAYGNLVLQILTGRNWAGLVEEAIMMDQSKLIEVLDP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="16180" PGL_stop="15598"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16180" e_stop="15598"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.986">
            <gDNA_exon_boundary e_start="16180" e_stop="15598" e_length="583"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16180" stop="15598"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16110" stop="15664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U325344" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTTTAAAATAAATTATTCCGTAATTTTATCCGAACCCTTGCACCTTTCCTGATTCTCGTTTTTAATCACAAGATCGTAACACTATTCCAAATTTCCCAATCAAAATGTGTTACGGCGGTCAACGATTACCGTCAAAAGACGACTTAACCGACCCGACCCGACGGACCCGAACTTTACCGGCGGCGAACGAGAACGCAGTGGTGGTTGAAAATCTTCGGGACCGGTTAGCTGAGACGGAGGCGCGGCTGGAACGAGCTAGGGCTCGGGAAGCGGAGCTGAGCCGGCAGCTGGAAGAGATGAAGAGGTACGTCTGCGTTATGGAAATTCTGGAATGTTACCTCAAGCGCCGATACAGGGAACAGCAAGTTAGAACCCTAGCAGTGGTAAATTCGAAGTAAAGATGATTTTTATGTGGTTAAAATGGATTATTAGGGTTTCGTGATTTATGTAATCATGTGTGTTGTAATTGTATATTCTTCAGTGTGATATAGAATTGTTAATCTATTGAACTTGAAATACTCTTCAATTTTATTGTTCTACGTGTTAAGCTTGATGTTAATCTGGATTAGAAATTTCAAATA</gDNA_template>
            <first_frame> N  F  K  I  N  Y  S  V  I  L  S  E  P  L  H  L  S  *  F  S  F  L  I  T  R  S  *  H  Y  S  K  F  P  N  Q  N  V  L  R  R  S  T  I  T  V  K  R  R  L  N  R  P  D  P  T  D  P  N  F  T  G  G  E  R  E  R  S  G  G  *  K  S  S  G  P  V  S  *  D  G  G  A  A  G  T  S  *  G  S  G  S  G  A  E  P  A  A  G  R  D  E  E  V  R  L  R  Y  G  N  S  G  M  L  P  Q  A  P  I  Q  G  T  A  S  *  N  P  S  S  G  K  F  E  V  K  M  I  F  M  W  L  K  W  I  I  R  V  S  *  F  M  *  S  C  V  L  *  L  Y  I  L  Q  C  D  I  E  L  L  I  Y  *  T  *  N  T  L  Q  F  Y  C  S  T  C  *  A  *  C  *  S  G  L  E  I  S  N  </first_frame>
            <second_frame>  I  L  K  *  I  I  P  *  F  Y  P  N  P  C  T  F  P  D  S  R  F  *  S  Q  D  R  N  T  I  P  N  F  P  I  K  M  C  Y  G  G  Q  R  L  P  S  K  D  D  L  T  D  P  T  R  R  T  R  T  L  P  A  A  N  E  N  A  V  V  V  E  N  L  R  D  R  L  A  E  T  E  A  R  L  E  R  A  R  A  R  E  A  E  L  S  R  Q  L  E  E  M  K  R  Y  V  C  V  M  E  I  L  E  C  Y  L  K  R  R  Y  R  E  Q  Q  V  R  T  L  A  V  V  N  S  K  *  R  *  F  L  C  G  *  N  G  L  L  G  F  R  D  L  C  N  H  V  C  C  N  C  I  F  F  S  V  I  *  N  C  *  S  I  E  L  E  I  L  F  N  F  I  V  L  R  V  K  L  D  V  N  L  D  *  K  F  Q  I </second_frame>
            <third_frame>   F  *  N  K  L  F  R  N  F  I  R  T  L  A  P  F  L  I  L  V  F  N  H  K  I  V  T  L  F  Q  I  S  Q  S  K  C  V  T  A  V  N  D  Y  R  Q  K  T  T  *  P  T  R  P  D  G  P  E  L  Y  R  R  R  T  R  T  Q  W  W  L  K  I  F  G  T  G  *  L  R  R  R  R  G  W  N  E  L  G  L  G  K  R  S  *  A  G  S  W  K  R  *  R  G  T  S  A  L  W  K  F  W  N  V  T  S  S  A  D  T  G  N  S  K  L  E  P  *  Q  W  *  I  R  S  K  D  D  F  Y  V  V  K  M  D  Y  *  G  F  V  I  Y  V  I  M  C  V  V  I  V  Y  S  S  V  *  Y  R  I  V  N  L  L  N  L  K  Y  S  S  I  L  L  F  Y  V  L  S  L  M  L  I  W  I  R  N  F  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16113" stop="15781"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>330</number_coding_nucleotides>
                  <number_encoded_amino_acids>110</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQDRNTIPNFPIKMCYGGQRLPSKDDLTDPTRRTRTLPAANENAVVVENLRDRLAETEARLERARAREAELSRQLEEMKRYVCVMEILECYLKRRYREQQVRTLAVVNSK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="23867" PGL_stop="22712"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23867" e_stop="23832"/>
            <exon e_start="23441" e_stop="22712"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.611"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.611">
            <gDNA_exon_boundary e_start="23867" e_stop="23832" e_length="36"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="23831" i_stop="23442" i_length="390"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="23441" e_stop="22712" e_length="730"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23867" stop="23832"/>
              <exon start="23441" stop="22712"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U331291" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATTTATATCTACTTCTGTTACTAAATGTTTTTTTT : TTTTTGGGGAAATTTAACACATAACATTGAGATTGGTACTAGTGTACAAACAAACACGCCTTGTTACTTCCTAATAACACAAATATTTGTAGATAAAATTACGTACAATAAATCTTAGTGATTCAGTCCTATCTCGAATCCGTGAAATGTACTGAAATTTCCTTAGTAACTCAAACTTTTTCCCAAATGACCTCCCATTTTTCTTCACAATAATAACCCCTCTTCATTTGATCATTGCTACTACCAAAATACCTAAAATTATGACTATTATCTCCATCTTGTTTATCACAAATGACATAGTCATAGAACACAACCCCACTAATAATTATGGCTACAATATGAATAGGAAGACCAGCCCAAAATCCAAAAAATGGATAAAATTGATAAACAAACCCAAAAATAATGGAAGAATACAAGAACCATATAGCAAATCCCAACAAGCTCTTCTCAAAAGACTTATTTTTCGATTGAATGTTTCGATATGTAGATGATAAGTTATTTGCCAAGTAAGCACTAAAATATATGAAAAAGATGAAAGCTAAGAACGAATATTGACTGTTAGAATATGCTCGATATATTGTAGCAATAAAATTGAATATGATCAATAAGGTTTGAACACATTGTAATGTGAATGATGTAGAGTTTGTCATGGATATAGTTGGAGTTCTTCTTTTACAACTAGTTTGTGTATACATTAAGTGGGGTTTTATTATTTTTTTGTGTGTGTGTT</gDNA_template>
            <first_frame> Y  L  Y  L  L  L  L  L  N  V  F  F  :  F  L  G  K  F  N  T  *  H  *  D  W  Y  *  C  T  N  K  H  A  L  L  L  P  N  N  T  N  I  C  R  *  N  Y  V  Q  *  I  L  V  I  Q  S  Y  L  E  S  V  K  C  T  E  I  S  L  V  T  Q  T  F  S  Q  M  T  S  H  F  S  S  Q  *  *  P  L  F  I  *  S  L  L  L  P  K  Y  L  K  L  *  L  L  S  P  S  C  L  S  Q  M  T  *  S  *  N  T  T  P  L  I  I  M  A  T  I  *  I  G  R  P  A  Q  N  P  K  N  G  *  N  *  *  T  N  P  K  I  M  E  E  Y  K  N  H  I  A  N  P  N  K  L  F  S  K  D  L  F  F  D  *  M  F  R  Y  V  D  D  K  L  F  A  K  *  A  L  K  Y  M  K  K  M  K  A  K  N  E  Y  *  L  L  E  Y  A  R  Y  I  V  A  I  K  L  N  M  I  N  K  V  *  T  H  C  N  V  N  D  V  E  F  V  M  D  I  V  G  V  L  L  L  Q  L  V  C  V  Y  I  K  W  G  F  I  I  F  L  C  V  C  </first_frame>
            <second_frame>  I  Y  I  Y  F  C  Y  *  M  F  F  F :   F  W  G  N  L  T  H  N  I  E  I  G  T  S  V  Q  T  N  T  P  C  Y  F  L  I  T  Q  I  F  V  D  K  I  T  Y  N  K  S  *  *  F  S  P  I  S  N  P  *  N  V  L  K  F  P  *  *  L  K  L  F  P  K  *  P  P  I  F  L  H  N  N  N  P  S  S  F  D  H  C  Y  Y  Q  N  T  *  N  Y  D  Y  Y  L  H  L  V  Y  H  K  *  H  S  H  R  T  Q  P  H  *  *  L  W  L  Q  Y  E  *  E  D  Q  P  K  I  Q  K  M  D  K  I  D  K  Q  T  Q  K  *  W  K  N  T  R  T  I  *  Q  I  P  T  S  S  S  Q  K  T  Y  F  S  I  E  C  F  D  M  *  M  I  S  Y  L  P  S  K  H  *  N  I  *  K  R  *  K  L  R  T  N  I  D  C  *  N  M  L  D  I  L  *  Q  *  N  *  I  *  S  I  R  F  E  H  I  V  M  *  M  M  *  S  L  S  W  I  *  L  E  F  F  F  Y  N  *  F  V  Y  T  L  S  G  V  L  L  F  F  C  V  C  V </second_frame>
            <third_frame>   F  I  S  T  S  V  T  K  C  F  F   : F  F  G  E  I  *  H  I  T  L  R  L  V  L  V  Y  K  Q  T  R  L  V  T  S  *  *  H  K  Y  L  *  I  K  L  R  T  I  N  L  S  D  S  V  L  S  R  I  R  E  M  Y  *  N  F  L  S  N  S  N  F  F  P  N  D  L  P  F  F  F  T  I  I  T  P  L  H  L  I  I  A  T  T  K  I  P  K  I  M  T  I  I  S  I  L  F  I  T  N  D  I  V  I  E  H  N  P  T  N  N  Y  G  Y  N  M  N  R  K  T  S  P  K  S  K  K  W  I  K  L  I  N  K  P  K  N  N  G  R  I  Q  E  P  Y  S  K  S  Q  Q  A  L  L  K  R  L  I  F  R  L  N  V  S  I  C  R  *  *  V  I  C  Q  V  S  T  K  I  Y  E  K  D  E  S  *  E  R  I  L  T  V  R  I  C  S  I  Y  C  S  N  K  I  E  Y  D  Q  *  G  L  N  T  L  *  C  E  *  C  R  V  C  H  G  Y  S  W  S  S  S  F  T  T  S  L  C  I  H  *  V  G  F  Y  Y  F  F  V  C  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23286" stop="22951"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>333</number_coding_nucleotides>
                  <number_encoded_amino_acids>111</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFLSNSNFFPNDLPFFFTIITPLHLIIATTKIPKIMTIISILFITNDIVIEHNPTNNYGYNMNRKTSPKSKKWIKLINKPKNNGRIQEPYSKSQQALLKRLIFRLNVSICR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="26876" PGL_stop="30038"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26876" e_stop="27180"/>
            <exon e_start="28051" e_stop="28371"/>
            <exon e_start="28797" e_stop="28930"/>
            <exon e_start="29288" e_stop="29460"/>
            <exon e_start="29651" e_stop="30038"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.974" e_score="1.000"/>
          <exon-intron don_prob="0.886" acc_prob="0.913" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.976" e_score="1.000"/>
          <exon-only e_score="0.987"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26876" e_stop="27180" e_length="305"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.974">
            <gDNA_intron_boundary i_start="27181" i_stop="28050" i_length="870"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="28051" e_stop="28371" e_length="321"/>
          </exon>
          <intron i_serial="2" don_prob="0.886" acc_prob="0.913">
            <gDNA_intron_boundary i_start="28372" i_stop="28796" i_length="425"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="28797" e_stop="28930" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.988" acc_prob="0.000">
            <gDNA_intron_boundary i_start="28931" i_stop="29287" i_length="357"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="29288" e_stop="29460" e_length="173"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.976">
            <gDNA_intron_boundary i_start="29461" i_stop="29650" i_length="190"/>
          </intron>
          <exon e_serial="5" e_score="0.987">
            <gDNA_exon_boundary e_start="29651" e_stop="30038" e_length="388"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26876" stop="27180"/>
              <exon start="28051" stop="28371"/>
              <exon start="28797" stop="28930"/>
              <exon start="29288" stop="29460"/>
              <exon start="29651" stop="30038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327481" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCACAGTTGGTGCAGCAGACATTTCAGGCGCCGAAATGTTATCCGGCTTTGCCACCCAGGAGTGATGTGGGTGCTTATATGGAAGCTGAGCTGGGAATGAAGATTGCTTGTGGATTTGAGATGATTTATCAGTTGAAAAAGAGGCAGGGCATGGACGGAAAAGGGAGTACATGGGATGCGTTTAGGCTGAGTCTAGAGCGGAGTGGGTACTTCGAAGGGCTGTTACCAGGATCGAAGGAGTATAAAAGATTGATGAAGAATGCTGAGGAGTATTACAAGAATAGTTCACTGCATGCAAGAGAAAG : TGCTACACTAAGTGCTCCAGTGCGAAGAATAGATGAGATCCTTGCCCTTCCTGATTCTGCTGATGACTTTAAGGATCAGGAGATACCGCCATCTGATGATGATTCATGGCTTTATGGTGGAGAGGATGAGCTAAATTCCGTTCTTCAAGAGAGGCAAAAGGAGATGGAACTTTACAATTCAAAAAGGAAACAGAAATCAAAAGAGCAGGATGGGCCCAGCAATCATTCTGATAATTTTGATCTAAAAGATATATCGAACTCTATGCAAGCATTTGTCACAAAAGTGGCCAGTTATGAAGGTGCAGAGGTTCCAGAGGACAG : GAATGTAAAGGAAGTGGACTTTGATGTCGATCACTTTATGAAAGACCTGGAATCGTTTATGAGGGGTCAGGGCAATGAAGACATTGGCCGTGATGTTGATATTGAAGAAGGGTCATCATCAGATATGGAGTTCG : ATGAATCTGAAGATGAGAGTGATATTGCCGAGCCACATGATGATAATGATGAGGGAGGTGCTGCTTTCATGCATTCGTATTCGGACACTCTGAATGATGAACTGAAAGGCACCACACTAAGTAATACCTTTGTCCGCGCAAATGGAGAGTCTGAGTCCATAAAGAAAGATGAG : GGAACATCTACTGCTGCAGAAAACATGGAAGAGGAGGATTTCAGTCCTGTAGATGTTGATTTCAATCTTGTAAAGAATTTCCTGGATTCGTTTTCTTCTCAAGATGGACTTCCAGGACCTGCTTCTAACTTGCTTGGACTTATGGGTCTACAGCTACCACCAGATGCTAGCAAAGGGAAATAACCATATTATACACAAACTTGTTTCCTCATTCTTCTTTTCCTTGCCTTTTTCTAAACGGCAATCTTTACAATACTATGTATTACGTATGTTTTAACTTCAAACGGAGAAAAAAGGAGGAGGTGGATTTATGTGGTATTTTTCATTTTTGACCATCAAATAATTTATATATTGATAAATTATGTAAAAAATATTATAAGTTGACGAA</gDNA_template>
            <first_frame> A  Q  L  V  Q  Q  T  F  Q  A  P  K  C  Y  P  A  L  P  P  R  S  D  V  G  A  Y  M  E  A  E  L  G  M  K  I  A  C  G  F  E  M  I  Y  Q  L  K  K  R  Q  G  M  D  G  K  G  S  T  W  D  A  F  R  L  S  L  E  R  S  G  Y  F  E  G  L  L  P  G  S  K  E  Y  K  R  L  M  K  N  A  E  E  Y  Y  K  N  S  S  L  H  A  R  E  S :   A  T  L  S  A  P  V  R  R  I  D  E  I  L  A  L  P  D  S  A  D  D  F  K  D  Q  E  I  P  P  S  D  D  D  S  W  L  Y  G  G  E  D  E  L  N  S  V  L  Q  E  R  Q  K  E  M  E  L  Y  N  S  K  R  K  Q  K  S  K  E  Q  D  G  P  S  N  H  S  D  N  F  D  L  K  D  I  S  N  S  M  Q  A  F  V  T  K  V  A  S  Y  E  G  A  E  V  P  E  D  R :   N  V  K  E  V  D  F  D  V  D  H  F  M  K  D  L  E  S  F  M  R  G  Q  G  N  E  D  I  G  R  D  V  D  I  E  E  G  S  S  S  D  M  E  F   : D  E  S  E  D  E  S  D  I  A  E  P  H  D  D  N  D  E  G  G  A  A  F  M  H  S  Y  S  D  T  L  N  D  E  L  K  G  T  T  L  S  N  T  F  V  R  A  N  G  E  S  E  S  I  K  K  D  E  :  G  T  S  T  A  A  E  N  M  E  E  E  D  F  S  P  V  D  V  D  F  N  L  V  K  N  F  L  D  S  F  S  S  Q  D  G  L  P  G  P  A  S  N  L  L  G  L  M  G  L  Q  L  P  P  D  A  S  K  G  K  *  P  Y  Y  T  Q  T  C  F  L  I  L  L  F  L  A  F  F  *  T  A  I  F  T  I  L  C  I  T  Y  V  L  T  S  N  G  E  K  R  R  R  W  I  Y  V  V  F  F  I  F  D  H  Q  I  I  Y  I  L  I  N  Y  V  K  N  I  I  S  *  R  </first_frame>
            <second_frame>  H  S  W  C  S  R  H  F  R  R  R  N  V  I  R  L  C  H  P  G  V  M  W  V  L  I  W  K  L  S  W  E  *  R  L  L  V  D  L  R  *  F  I  S  *  K  R  G  R  A  W  T  E  K  G  V  H  G  M  R  L  G  *  V  *  S  G  V  G  T  S  K  G  C  Y  Q  D  R  R  S  I  K  D  *  *  R  M  L  R  S  I  T  R  I  V  H  C  M  Q  E  K   : V  L  H  *  V  L  Q  C  E  E  *  M  R  S  L  P  F  L  I  L  L  M  T  L  R  I  R  R  Y  R  H  L  M  M  I  H  G  F  M  V  E  R  M  S  *  I  P  F  F  K  R  G  K  R  R  W  N  F  T  I  Q  K  G  N  R  N  Q  K  S  R  M  G  P  A  I  I  L  I  I  L  I  *  K  I  Y  R  T  L  C  K  H  L  S  Q  K  W  P  V  M  K  V  Q  R  F  Q  R  T   : G  M  *  R  K  W  T  L  M  S  I  T  L  *  K  T  W  N  R  L  *  G  V  R  A  M  K  T  L  A  V  M  L  I  L  K  K  G  H  H  Q  I  W  S  S  :  M  N  L  K  M  R  V  I  L  P  S  H  M  M  I  M  M  R  E  V  L  L  S  C  I  R  I  R  T  L  *  M  M  N  *  K  A  P  H  *  V  I  P  L  S  A  Q  M  E  S  L  S  P  *  R  K  M  R :   E  H  L  L  L  Q  K  T  W  K  R  R  I  S  V  L  *  M  L  I  S  I  L  *  R  I  S  W  I  R  F  L  L  K  M  D  F  Q  D  L  L  L  T  C  L  D  L  W  V  Y  S  Y  H  Q  M  L  A  K  G  N  N  H  I  I  H  K  L  V  S  S  F  F  F  S  L  P  F  S  K  R  Q  S  L  Q  Y  Y  V  L  R  M  F  *  L  Q  T  E  K  K  G  G  G  G  F  M  W  Y  F  S  F  L  T  I  K  *  F  I  Y  *  *  I  M  *  K  I  L  *  V  D  E </second_frame>
            <third_frame>   T  V  G  A  A  D  I  S  G  A  E  M  L  S  G  F  A  T  Q  E  *  C  G  C  L  Y  G  S  *  A  G  N  E  D  C  L  W  I  *  D  D  L  S  V  E  K  E  A  G  H  G  R  K  R  E  Y  M  G  C  V  *  A  E  S  R  A  E  W  V  L  R  R  A  V  T  R  I  E  G  V  *  K  I  D  E  E  C  *  G  V  L  Q  E  *  F  T  A  C  K  R  K  :  C  Y  T  K  C  S  S  A  K  N  R  *  D  P  C  P  S  *  F  C  *  *  L  *  G  S  G  D  T  A  I  *  *  *  F  M  A  L  W  W  R  G  *  A  K  F  R  S  S  R  E  A  K  G  D  G  T  L  Q  F  K  K  E  T  E  I  K  R  A  G  W  A  Q  Q  S  F  *  *  F  *  S  K  R  Y  I  E  L  Y  A  S  I  C  H  K  S  G  Q  L  *  R  C  R  G  S  R  G  Q  :  E  C  K  G  S  G  L  *  C  R  S  L  Y  E  R  P  G  I  V  Y  E  G  S  G  Q  *  R  H  W  P  *  C  *  Y  *  R  R  V  I  I  R  Y  G  V  R :   *  I  *  R  *  E  *  Y  C  R  A  T  *  *  *  *  *  G  R  C  C  F  H  A  F  V  F  G  H  S  E  *  *  T  E  R  H  H  T  K  *  Y  L  C  P  R  K  W  R  V  *  V  H  K  E  R  *   : G  N  I  Y  C  C  R  K  H  G  R  G  G  F  Q  S  C  R  C  *  F  Q  S  C  K  E  F  P  G  F  V  F  F  S  R  W  T  S  R  T  C  F  *  L  A  W  T  Y  G  S  T  A  T  T  R  C  *  Q  R  E  I  T  I  L  Y  T  N  L  F  P  H  S  S  F  P  C  L  F  L  N  G  N  L  Y  N  T  M  Y  Y  V  C  F  N  F  K  R  R  K  K  E  E  V  D  L  C  G  I  F  H  F  *  P  S  N  N  L  Y  I  D  K  L  C  K  K  Y  Y  K  L  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26876" stop="27180"/>
                    <exon start="28051" stop="28371"/>
                    <exon start="28797" stop="28930"/>
                    <exon start="29288" stop="29460"/>
                    <exon start="29651" stop="29833"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1113</number_coding_nucleotides>
                  <number_encoded_amino_acids>371</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AQLVQQTFQAPKCYPALPPRSDVGAYMEAELGMKIACGFEMIYQLKKRQGMDGKGSTWDAFRLSLERSGYFEGLLPGSKEYKRLMKNAEEYYKNSSLHARESATLSAPVRRIDEILALPDSADDFKDQEIPPSDDDSWLYGGEDELNSVLQERQKEMELYNSKRKQKSKEQDGPSNHSDNFDLKDISNSMQAFVTKVASYEGAEVPEDRNVKEVDFDVDHFMKDLESFMRGQGNEDIGRDVDIEEGSSSDMEFDESEDESDIAEPHDDNDEGGAAFMHSYSDTLNDELKGTTLSNTFVRANGESESIKKDEGTSTAAENMEEEDFSPVDVDFNLVKNFLDSFSSQDGLPGPASNLLGLMGLQLPPDASKGK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="30670" PGL_stop="32870"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30670" e_stop="30824"/>
            <exon e_start="31718" e_stop="31901"/>
            <exon e_start="31982" e_stop="32115"/>
            <exon e_start="32204" e_stop="32389"/>
            <exon e_start="32526" e_stop="32870"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="0.852" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.994" e_score="1.000"/>
          <exon-only e_score="0.959"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="30670" e_stop="30824" e_length="155"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="30825" i_stop="31717" i_length="893"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="31718" e_stop="31901" e_length="184"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.998">
            <gDNA_intron_boundary i_start="31902" i_stop="31981" i_length="80"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="31982" e_stop="32115" e_length="134"/>
          </exon>
          <intron i_serial="3" don_prob="0.928" acc_prob="0.852">
            <gDNA_intron_boundary i_start="32116" i_stop="32203" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="32204" e_stop="32389" e_length="186"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.994">
            <gDNA_intron_boundary i_start="32390" i_stop="32525" i_length="136"/>
          </intron>
          <exon e_serial="5" e_score="0.959">
            <gDNA_exon_boundary e_start="32526" e_stop="32870" e_length="345"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30670" stop="30824"/>
              <exon start="31718" stop="31901"/>
              <exon start="31982" stop="32115"/>
              <exon start="32204" stop="32389"/>
              <exon start="32526" stop="32870"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30674" stop="30824"/>
              <exon start="31718" stop="31901"/>
              <exon start="31982" stop="32115"/>
              <exon start="32204" stop="32235"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337801" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGGAACAGTGGGGCAAGAGGCTGCGATTGACTTACTGAAGAGTGAGATTCCGGCGGAGGAAGATGAACCGCTGCTTCTCACCGGCGATGTTAACACCGGTCTCGTACTCGTCGACATCGTTAATGGCTTCTGCACCGTCGGAGCTGGCAATTTG : GCTCCGGTGACACCAAATAGACAAATTTCAGCAATGGTTGATGAGTCAGTTAAACTTGCAAAAGTGTTCTGTGAGAAGAAATGGCCTATTTATGCACTTCGTGATTCGCATCATCCTGATGTGCCTGAGCCACCTAATCCTCCTCATTGTATCGCTGGAACAGATGAATCTGAGTTGGTTCCTG : CACTGCAGTGGTTGGAGAATGAACCTAATGTGACAGTGCGATGCAAGGATTGTATTGATGGTTTCCTTGGCTCGATTGAGAAAGATGGATCTAATGTCTTTGTAAATTGGGTGAAAGCTAATGAGATTAAAATT : ATATTGGTTGTAGGGATATGCACGGACATATGCGTGCTTGATTTTGTGTGTTCTGTCTTATCTGCACGAAACCGTGGATTTCTCTCCCCACTGAAAGACGTGATTGTATATTCCCCTGGCTGCGCTACCTATGATCTTCCAGTCCAGATTGCCAGAAATATAAAAGGAGCTTTACCTCATCCACAG : GAATTCATGCATCACATAGGCCTTTACATGGCCAAAGGAAGAGGAGCAAAAGTAGTTTCACATATCTCATTTGACACGACAACCAACGAGACATAACTTTGAACAATGAGATTAAGATCCATATTTCTCATTCGAAACTCTGAAGGACACTGCTACAGCTATTGCAGACACTGCTTAGTATATATTAAGTTATAGTAGTAAGATAAATATGCCCATATGCATCTTCTCTTGTTCAGTTGGCTGTGCAGCTAACTTCTCTTGTTCCAAAACTACTAATACTTCTACCATATTGTAATAAACTATCACGTTTTGGATGCCAAATAAATTTGTCTATAGACAACTTTG</gDNA_template>
            <first_frame> W  E  Q  W  G  K  R  L  R  L  T  Y  *  R  V  R  F  R  R  R  K  M  N  R  C  F  S  P  A  M  L  T  P  V  S  Y  S  S  T  S  L  M  A  S  A  P  S  E  L  A  I  W :   L  R  *  H  Q  I  D  K  F  Q  Q  W  L  M  S  Q  L  N  L  Q  K  C  S  V  R  R  N  G  L  F  M  H  F  V  I  R  I  I  L  M  C  L  S  H  L  I  L  L  I  V  S  L  E  Q  M  N  L  S  W  F  L  :  H  C  S  G  W  R  M  N  L  M  *  Q  C  D  A  R  I  V  L  M  V  S  L  A  R  L  R  K  M  D  L  M  S  L  *  I  G  *  K  L  M  R  L  K  L :   Y  W  L  *  G  Y  A  R  T  Y  A  C  L  I  L  C  V  L  S  Y  L  H  E  T  V  D  F  S  P  H  *  K  T  *  L  Y  I  P  L  A  A  L  P  M  I  F  Q  S  R  L  P  E  I  *  K  E  L  Y  L  I  H  R :   N  S  C  I  T  *  A  F  T  W  P  K  E  E  E  Q  K  *  F  H  I  S  H  L  T  R  Q  P  T  R  H  N  F  E  Q  *  D  *  D  P  Y  F  S  F  E  T  L  K  D  T  A  T  A  I  A  D  T  A  *  Y  I  L  S  Y  S  S  K  I  N  M  P  I  C  I  F  S  C  S  V  G  C  A  A  N  F  S  C  S  K  T  T  N  T  S  T  I  L  *  *  T  I  T  F  W  M  P  N  K  F  V  Y  R  Q  L   </first_frame>
            <second_frame>  G  N  S  G  A  R  G  C  D  *  L  T  E  E  *  D  S  G  G  G  R  *  T  A  A  S  H  R  R  C  *  H  R  S  R  T  R  R  H  R  *  W  L  L  H  R  R  S  W  Q  F   : G  S  G  D  T  K  *  T  N  F  S  N  G  *  *  V  S  *  T  C  K  S  V  L  *  E  E  M  A  Y  L  C  T  S  *  F  A  S  S  *  C  A  *  A  T  *  S  S  S  L  Y  R  W  N  R  *  I  *  V  G  S  C :   T  A  V  V  G  E  *  T  *  C  D  S  A  M  Q  G  L  Y  *  W  F  P  W  L  D  *  E  R  W  I  *  C  L  C  K  L  G  E  S  *  *  D  *  N   : Y  I  G  C  R  D  M  H  G  H  M  R  A  *  F  C  V  F  C  L  I  C  T  K  P  W  I  S  L  P  T  E  R  R  D  C  I  F  P  W  L  R  Y  L  *  S  S  S  P  D  C  Q  K  Y  K  R  S  F  T  S  S  T   : G  I  H  A  S  H  R  P  L  H  G  Q  R  K  R  S  K  S  S  F  T  Y  L  I  *  H  D  N  Q  R  D  I  T  L  N  N  E  I  K  I  H  I  S  H  S  K  L  *  R  T  L  L  Q  L  L  Q  T  L  L  S  I  Y  *  V  I  V  V  R  *  I  C  P  Y  A  S  S  L  V  Q  L  A  V  Q  L  T  S  L  V  P  K  L  L  I  L  L  P  Y  C  N  K  L  S  R  F  G  C  Q  I  N  L  S  I  D  N  F  </second_frame>
            <third_frame>   G  T  V  G  Q  E  A  A  I  D  L  L  K  S  E  I  P  A  E  E  D  E  P  L  L  L  T  G  D  V  N  T  G  L  V  L  V  D  I  V  N  G  F  C  T  V  G  A  G  N  L  :  A  P  V  T  P  N  R  Q  I  S  A  M  V  D  E  S  V  K  L  A  K  V  F  C  E  K  K  W  P  I  Y  A  L  R  D  S  H  H  P  D  V  P  E  P  P  N  P  P  H  C  I  A  G  T  D  E  S  E  L  V  P   : A  L  Q  W  L  E  N  E  P  N  V  T  V  R  C  K  D  C  I  D  G  F  L  G  S  I  E  K  D  G  S  N  V  F  V  N  W  V  K  A  N  E  I  K  I  :  I  L  V  V  G  I  C  T  D  I  C  V  L  D  F  V  C  S  V  L  S  A  R  N  R  G  F  L  S  P  L  K  D  V  I  V  Y  S  P  G  C  A  T  Y  D  L  P  V  Q  I  A  R  N  I  K  G  A  L  P  H  P  Q  :  E  F  M  H  H  I  G  L  Y  M  A  K  G  R  G  A  K  V  V  S  H  I  S  F  D  T  T  T  N  E  T  *  L  *  T  M  R  L  R  S  I  F  L  I  R  N  S  E  G  H  C  Y  S  Y  C  R  H  C  L  V  Y  I  K  L  *  *  *  D  K  Y  A  H  M  H  L  L  L  F  S  W  L  C  S  *  L  L  L  F  Q  N  Y  *  Y  F  Y  H  I  V  I  N  Y  H  V  L  D  A  K  *  I  C  L  *  T  T  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30672" stop="30824"/>
                    <exon start="31718" stop="31901"/>
                    <exon start="31982" stop="32115"/>
                    <exon start="32204" stop="32389"/>
                    <exon start="32526" stop="32621"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>750</number_coding_nucleotides>
                  <number_encoded_amino_acids>250</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GTVGQEAAIDLLKSEIPAEEDEPLLLTGDVNTGLVLVDIVNGFCTVGAGNLAPVTPNRQISAMVDESVKLAKVFCEKKWPIYALRDSHHPDVPEPPNPPHCIAGTDESELVPALQWLENEPNVTVRCKDCIDGFLGSIEKDGSNVFVNWVKANEIKIILVVGICTDICVLDFVCSVLSARNRGFLSPLKDVIVYSPGCATYDLPVQIARNIKGALPHPQEFMHHIGLYMAKGRGAKVVSHISFDTTTNET*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="46257" PGL_stop="42633"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46257" e_stop="45091"/>
            <exon e_start="43648" e_stop="43167"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.960" e_score="0.982"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="46257" e_stop="45091" e_length="1167"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.960">
            <gDNA_intron_boundary i_start="45090" i_stop="43649" i_length="1442"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="43648" e_stop="43167" e_length="482"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46257" stop="45091"/>
              <exon start="43648" stop="43167"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319439" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTGTGTTACTTTTGGGGGGGTGGGGTGAAGACGAAAGAAGGGAGTTTTAGTGAGAGAGAGAAAAAGGGTTCACCGCCGGTGGCGGAAAATGGATATGCCGGTGAACAGTTTTGTTTTTTTCCGGTGATATTACCGTGCTGATCTCACTTTCCGGCGAGGATTTGAGAATTTTCCGGTGGTGACACCGTTTGATATATATACACACATCTGCCGAAAGCTTATCCTTTTTCTTTACTGAGAAACAAATTCGGGTCTGGGTTTGACCCGATTGGAGAAATGGTTTTTGGTGTTTTAATTCCAATTTTGCCCTCATCAATCACGAGTTTGAGATGAAAAACTTGATTTAAATTTTGTGGATTTATCATATTGTTAGACCCTTTTGAACTGTTTGATGTTTTCTGGGATTTTTAGTTGAATTTTAGTGCTAGGAGATGGTGGGGTTTTAATTTTTGAAGCTTTTCTTGAAAAGGGGTTGTTTTTTTATGATTAAACTGCTGAAAGCTGTTTGCTTTTTTGCTCTTTTGATAGAAAAAGTTTGTCTTTAGCCTTCCATCTGATATTTTGTTTTAGTAATGGATTAAGCATTTGTTGAATTTTTGTTCTGGGGCTTGGATTTGAGTTCTTGATTGTGTTTCAGAGCTTAAAGTTTGATTTTTTTTTGCTAAGTTTGATCATTTGTAGAATCCCTTTTGGATGAAATGGCAGTTTCTTTGACTCGTTTGTCATGGTGGTGGTGGGGTGGGAAAGAGAAGGAACCAGTGTCTAATGGATCTTCAATGAATCCCTTGCAAGATTTTGGATTTGGATTGAAGGAACAAAGTGATAGTTTGAAGTTTAAGTCAGTGAGGGGGGCTAATCTAGCTTCAACTACTAGGAAAGTGAAGAGGAAATGGAAGAGTAGAGAGGAGAGGAAGAGGGTTGATGAGAAATATGATGTGGTATTGGTGCCATCTGATGGTGTTTGTTTATCAGGTTCCGAATCCGATGACTCTGACTGGTCGATCGGGTGGCTGGAACCACATGCCCCTGATTTCCAGAATGATGATGAGGGAGATGACAGTTTTGCTGTGTTGGTTCCTTGCTACAGGCATGATTGTAGAGAGATAGGAGAGCCAAACATTCTGTGTGTTTGTGCCATTGTTATCCTTTGAAATACCAATCGTGTG : AGGGTAAGAAGTATATGGAGCAATGGCTCTCTTCTCTTCAGAATTTTTGAATATACTGCAGCTGGTCGTTATCTACGCATTAGGAATTTTCTGAAGCAGGGTCTATCTTTTAGTATTTGAGGAGATATGCTAGTTCTGCATCAATATCGAAAAGTAGTGGCAGCAGGTCAGCATTTTCATTTGCGAGAGACAAATAATCAAGTTTTTCGTGGCAGTGATCTTTGGTTTCGGGCTCAAATACACAAATCAATGTCATCTTTAAACTTTAGAACTGATCAACTTCTGTTGTTGTGGGGAAAACTTGACATATCAAGCTGATTTTTTAGTGTAAATATAGCTAATGTGAATATGGGAGAAGTAGTATGCTTTTTAACTGCTGCTATTGTAAATAAATCATCTGTCTTCCAATATCCAGACAAGTGAAAACATCATTGTTTATATCTTTGATCATACATTAATGTTAAATATTATGTTCTTATGAA</gDNA_template>
            <first_frame> C  V  L  L  L  G  G  W  G  E  D  E  R  R  E  F  *  *  E  R  E  K  G  F  T  A  G  G  G  K  W  I  C  R  *  T  V  L  F  F  S  G  D  I  T  V  L  I  S  L  S  G  E  D  L  R  I  F  R  W  *  H  R  L  I  Y  I  H  T  S  A  E  S  L  S  F  F  F  T  E  K  Q  I  R  V  W  V  *  P  D  W  R  N  G  F  W  C  F  N  S  N  F  A  L  I  N  H  E  F  E  M  K  N  L  I  *  I  L  W  I  Y  H  I  V  R  P  F  *  T  V  *  C  F  L  G  F  L  V  E  F  *  C  *  E  M  V  G  F  *  F  L  K  L  F  L  K  R  G  C  F  F  M  I  K  L  L  K  A  V  C  F  F  A  L  L  I  E  K  V  C  L  *  P  S  I  *  Y  F  V  L  V  M  D  *  A  F  V  E  F  L  F  W  G  L  D  L  S  S  *  L  C  F  R  A  *  S  L  I  F  F  C  *  V  *  S  F  V  E  S  L  L  D  E  M  A  V  S  L  T  R  L  S  W  W  W  W  G  G  K  E  K  E  P  V  S  N  G  S  S  M  N  P  L  Q  D  F  G  F  G  L  K  E  Q  S  D  S  L  K  F  K  S  V  R  G  A  N  L  A  S  T  T  R  K  V  K  R  K  W  K  S  R  E  E  R  K  R  V  D  E  K  Y  D  V  V  L  V  P  S  D  G  V  C  L  S  G  S  E  S  D  D  S  D  W  S  I  G  W  L  E  P  H  A  P  D  F  Q  N  D  D  E  G  D  D  S  F  A  V  L  V  P  C  Y  R  H  D  C  R  E  I  G  E  P  N  I  L  C  V  C  A  I  V  I  L  *  N  T  N  R  V  :  R  V  R  S  I  W  S  N  G  S  L  L  F  R  I  F  E  Y  T  A  A  G  R  Y  L  R  I  R  N  F  L  K  Q  G  L  S  F  S  I  *  G  D  M  L  V  L  H  Q  Y  R  K  V  V  A  A  G  Q  H  F  H  L  R  E  T  N  N  Q  V  F  R  G  S  D  L  W  F  R  A  Q  I  H  K  S  M  S  S  L  N  F  R  T  D  Q  L  L  L  L  W  G  K  L  D  I  S  S  *  F  F  S  V  N  I  A  N  V  N  M  G  E  V  V  C  F  L  T  A  A  I  V  N  K  S  S  V  F  Q  Y  P  D  K  *  K  H  H  C  L  Y  L  *  S  Y  I  N  V  K  Y  Y  V  L  M   </first_frame>
            <second_frame>  V  C  Y  F  W  G  G  G  V  K  T  K  E  G  S  F  S  E  R  E  K  K  G  S  P  P  V  A  E  N  G  Y  A  G  E  Q  F  C  F  F  P  V  I  L  P  C  *  S  H  F  P  A  R  I  *  E  F  S  G  G  D  T  V  *  Y  I  Y  T  H  L  P  K  A  Y  P  F  S  L  L  R  N  K  F  G  S  G  F  D  P  I  G  E  M  V  F  G  V  L  I  P  I  L  P  S  S  I  T  S  L  R  *  K  T  *  F  K  F  C  G  F  I  I  L  L  D  P  F  E  L  F  D  V  F  W  D  F  *  L  N  F  S  A  R  R  W  W  G  F  N  F  *  S  F  S  *  K  G  V  V  F  L  *  L  N  C  *  K  L  F  A  F  L  L  F  *  *  K  K  F  V  F  S  L  P  S  D  I  L  F  *  *  W  I  K  H  L  L  N  F  C  S  G  A  W  I  *  V  L  D  C  V  S  E  L  K  V  *  F  F  F  A  K  F  D  H  L  *  N  P  F  W  M  K  W  Q  F  L  *  L  V  C  H  G  G  G  G  V  G  K  R  R  N  Q  C  L  M  D  L  Q  *  I  P  C  K  I  L  D  L  D  *  R  N  K  V  I  V  *  S  L  S  Q  *  G  G  L  I  *  L  Q  L  L  G  K  *  R  G  N  G  R  V  E  R  R  G  R  G  L  M  R  N  M  M  W  Y  W  C  H  L  M  V  F  V  Y  Q  V  P  N  P  M  T  L  T  G  R  S  G  G  W  N  H  M  P  L  I  S  R  M  M  M  R  E  M  T  V  L  L  C  W  F  L  A  T  G  M  I  V  E  R  *  E  S  Q  T  F  C  V  F  V  P  L  L  S  F  E  I  P  I  V  * :   G  *  E  V  Y  G  A  M  A  L  F  S  S  E  F  L  N  I  L  Q  L  V  V  I  Y  A  L  G  I  F  *  S  R  V  Y  L  L  V  F  E  E  I  C  *  F  C  I  N  I  E  K  *  W  Q  Q  V  S  I  F  I  C  E  R  Q  I  I  K  F  F  V  A  V  I  F  G  F  G  L  K  Y  T  N  Q  C  H  L  *  T  L  E  L  I  N  F  C  C  C  G  E  N  L  T  Y  Q  A  D  F  L  V  *  I  *  L  M  *  I  W  E  K  *  Y  A  F  *  L  L  L  L  *  I  N  H  L  S  S  N  I  Q  T  S  E  N  I  I  V  Y  I  F  D  H  T  L  M  L  N  I  M  F  L  *  </second_frame>
            <third_frame>   C  V  T  F  G  G  V  G  *  R  R  K  K  G  V  L  V  R  E  R  K  R  V  H  R  R  W  R  K  M  D  M  P  V  N  S  F  V  F  F  R  *  Y  Y  R  A  D  L  T  F  R  R  G  F  E  N  F  P  V  V  T  P  F  D  I  Y  T  H  I  C  R  K  L  I  L  F  L  Y  *  E  T  N  S  G  L  G  L  T  R  L  E  K  W  F  L  V  F  *  F  Q  F  C  P  H  Q  S  R  V  *  D  E  K  L  D  L  N  F  V  D  L  S  Y  C  *  T  L  L  N  C  L  M  F  S  G  I  F  S  *  I  L  V  L  G  D  G  G  V  L  I  F  E  A  F  L  E  K  G  L  F  F  Y  D  *  T  A  E  S  C  L  L  F  C  S  F  D  R  K  S  L  S  L  A  F  H  L  I  F  C  F  S  N  G  L  S  I  C  *  I  F  V  L  G  L  G  F  E  F  L  I  V  F  Q  S  L  K  F  D  F  F  L  L  S  L  I  I  C  R  I  P  F  G  *  N  G  S  F  F  D  S  F  V  M  V  V  V  G  W  E  R  E  G  T  S  V  *  W  I  F  N  E  S  L  A  R  F  W  I  W  I  E  G  T  K  *  *  F  E  V  *  V  S  E  G  G  *  S  S  F  N  Y  *  E  S  E  E  E  M  E  E  *  R  G  E  E  E  G  *  *  E  I  *  C  G  I  G  A  I  *  W  C  L  F  I  R  F  R  I  R  *  L  *  L  V  D  R  V  A  G  T  T  C  P  *  F  P  E  *  *  *  G  R  *  Q  F  C  C  V  G  S  L  L  Q  A  *  L  *  R  D  R  R  A  K  H  S  V  C  L  C  H  C  Y  P  L  K  Y  Q  S  C   : E  G  K  K  Y  M  E  Q  W  L  S  S  L  Q  N  F  *  I  Y  C  S  W  S  L  S  T  H  *  E  F  S  E  A  G  S  I  F  *  Y  L  R  R  Y  A  S  S  A  S  I  S  K  S  S  G  S  R  S  A  F  S  F  A  R  D  K  *  S  S  F  S  W  Q  *  S  L  V  S  G  S  N  T  Q  I  N  V  I  F  K  L  *  N  *  S  T  S  V  V  V  G  K  T  *  H  I  K  L  I  F  *  C  K  Y  S  *  C  E  Y  G  R  S  S  M  L  F  N  C  C  Y  C  K  *  I  I  C  L  P  I  S  R  Q  V  K  T  S  L  F  I  S  L  I  I  H  *  C  *  I  L  C  S  Y  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45585" stop="45106"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFVESLLDEMAVSLTRLSWWWWGGKEKEPVSNGSSMNPLQDFGFGLKEQSDSLKFKSVRGANLASTTRKVKRKWKSREERKRVDEKYDVVLVPSDGVCLSGSESDDSDWSIGWLEPHAPDFQNDDEGDDSFAVLVPCYRHDCREIGEPNILCVCAIVIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="43528" stop="43331"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GDMLVLHQYRKVVAAGQHFHLRETNNQVFRGSDLWFRAQIHKSMSSLNFRTDQLLLLWGKLDISS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="43408" e_stop="43172"/>
            <exon e_start="42653" e_stop="42633"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.538" e_score="0.992"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.992">
            <gDNA_exon_boundary e_start="43408" e_stop="43172" e_length="237"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.538">
            <gDNA_intron_boundary i_start="43171" i_stop="42654" i_length="518"/>
          </intron>
          <exon e_serial="2" e_score="0.667">
            <gDNA_exon_boundary e_start="42653" e_stop="42633" e_length="21"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="43408" stop="43172"/>
              <exon start="42653" stop="42633"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336818" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CACAAATCAATGTCATCTTTAAACTTTAGAACTGATCAACTTCTGTTGTTGTGGGGAAAACTTGACATATCAAGCTGATTTTTTAGTGTAAATATAGCTAATGTGAATATGGGAGAAGTAGTATGCTTTTTAACTGCTGCTATTGTAAATAAATCATCTGTCTTCCAATATCCAGACAAGTGAAAACATCATTGTTTATATCTTTGATCATACATTAATGTTAAATATTATGTTCTT : GTTGAAAAGTGAAAAAAAAAA</gDNA_template>
            <first_frame> H  K  S  M  S  S  L  N  F  R  T  D  Q  L  L  L  L  W  G  K  L  D  I  S  S  *  F  F  S  V  N  I  A  N  V  N  M  G  E  V  V  C  F  L  T  A  A  I  V  N  K  S  S  V  F  Q  Y  P  D  K  *  K  H  H  C  L  Y  L  *  S  Y  I  N  V  K  Y  Y  V  L  :  V  E  K  *  K  K  K </first_frame>
            <second_frame>  T  N  Q  C  H  L  *  T  L  E  L  I  N  F  C  C  C  G  E  N  L  T  Y  Q  A  D  F  L  V  *  I  *  L  M  *  I  W  E  K  *  Y  A  F  *  L  L  L  L  *  I  N  H  L  S  S  N  I  Q  T  S  E  N  I  I  V  Y  I  F  D  H  T  L  M  L  N  I  M  F  L :   L  K  S  E  K  K   </second_frame>
            <third_frame>   Q  I  N  V  I  F  K  L  *  N  *  S  T  S  V  V  V  G  K  T  *  H  I  K  L  I  F  *  C  K  Y  S  *  C  E  Y  G  R  S  S  M  L  F  N  C  C  Y  C  K  *  I  I  C  L  P  I  S  R  Q  V  K  T  S  L  F  I  S  L  I  I  H  *  C  *  I  L  C  S   : C  *  K  V  K  K  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C11HBa0107K14.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="60030" PGL_stop="62104"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="60030" e_stop="60109"/>
            <exon e_start="60417" e_stop="60648"/>
            <exon e_start="61029" e_stop="61088"/>
            <exon e_start="61466" e_stop="61620"/>
            <exon e_start="62070" e_stop="62104"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="1.000" e_score="0.988"/>
          <exon-intron don_prob="0.999" acc_prob="0.955" e_score="1.000"/>
          <exon-intron don_prob="0.941" acc_prob="1.000" e_score="0.983"/>
          <exon-intron don_prob="0.966" acc_prob="0.993" e_score="0.994"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.988">
            <gDNA_exon_boundary e_start="60030" e_stop="60109" e_length="80"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="1.000">
            <gDNA_intron_boundary i_start="60110" i_stop="60416" i_length="307"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="60417" e_stop="60648" e_length="232"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.955">
            <gDNA_intron_boundary i_start="60649" i_stop="61028" i_length="380"/>
          </intron>
          <exon e_serial="3" e_score="0.983">
            <gDNA_exon_boundary e_start="61029" e_stop="61088" e_length="60"/>
          </exon>
          <intron i_serial="3" don_prob="0.941" acc_prob="1.000">
            <gDNA_intron_boundary i_start="61089" i_stop="61465" i_length="377"/>
          </intron>
          <exon e_serial="4" e_score="0.994">
            <gDNA_exon_boundary e_start="61466" e_stop="61620" e_length="155"/>
          </exon>
          <intron i_serial="4" don_prob="0.966" acc_prob="0.993">
            <gDNA_intron_boundary i_start="61621" i_stop="62069" i_length="449"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="62070" e_stop="62104" e_length="35"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60030" stop="60109"/>
              <exon start="60417" stop="60648"/>
              <exon start="61029" stop="61088"/>
              <exon start="61466" stop="61620"/>
              <exon start="62070" stop="62104"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346550" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTACCTTGTTCGTGCAAACCATCACACATACGATGTCGTTTTGAAGGTTTCTTCCTTTCTCTGTATTCCGTTAGACAAG : GTTTTTTTCAAGAGAAGTAGAGGTTGAGGGGGGAATCATCACTATCCTTGTTTTTGTAATTAGGAAGACTTTTGATCAATGTGGAGTAGTTTAATTATCTTATGCTGCTAGTGATAGTTGGTTGTTTGCTTAGCTTTGTCCAATAATGGTTGCTGCTGGTTCTTTGCAGTTGTCCCATTATTGGGGGACTTGCAAGAACCATGAGCGCCTTAAGAAATATTCGCCTATACAG : AACACACTTGGAAGGAACAGGTGGCGTTCTTGTTGCACGAATCTGTCATCTTTTTCATCA : CGGCAGGACTCTTGGAGCATCCATCACTCAAGAGGATTGCAAGTGAAGAAACATGTGCTCCCATATAGAAGCAATTTGTTGAAGTGTAATTCTTTCCTAAAACCTGACCAAGCTTTTGACATTTCTGTAAAGAATGCTGCTATTATACTGAAAAG : ATCATACAATAGCTTACAAGGAAGCCCACATCTGC</gDNA_template>
            <first_frame> F  T  L  F  V  Q  T  I  T  H  T  M  S  F  *  R  F  L  P  F  S  V  F  R  *  T  R :   F  F  S  R  E  V  E  V  E  G  G  I  I  T  I  L  V  F  V  I  R  K  T  F  D  Q  C  G  V  V  *  L  S  Y  A  A  S  D  S  W  L  F  A  *  L  C  P  I  M  V  A  A  G  S  L  Q  L  S  H  Y  W  G  T  C  K  N  H  E  R  L  K  K  Y  S  P  I  Q  :  N  T  L  G  R  N  R  W  R  S  C  C  T  N  L  S  S  F  S  S  :  R  Q  D  S  W  S  I  H  H  S  R  G  L  Q  V  K  K  H  V  L  P  Y  R  S  N  L  L  K  C  N  S  F  L  K  P  D  Q  A  F  D  I  S  V  K  N  A  A  I  I  L  K  R :   S  Y  N  S  L  Q  G  S  P  H  L  </first_frame>
            <second_frame>  L  P  C  S  C  K  P  S  H  I  R  C  R  F  E  G  F  F  L  S  L  Y  S  V  R  Q   : G  F  F  Q  E  K  *  R  L  R  G  E  S  S  L  S  L  F  L  *  L  G  R  L  L  I  N  V  E  *  F  N  Y  L  M  L  L  V  I  V  G  C  L  L  S  F  V  Q  *  W  L  L  L  V  L  C  S  C  P  I  I  G  G  L  A  R  T  M  S  A  L  R  N  I  R  L  Y  R :   T  H  L  E  G  T  G  G  V  L  V  A  R  I  C  H  L  F  H  H :   G  R  T  L  G  A  S  I  T  Q  E  D  C  K  *  R  N  M  C  S  H  I  E  A  I  C  *  S  V  I  L  S  *  N  L  T  K  L  L  T  F  L  *  R  M  L  L  L  Y  *  K   : D  H  T  I  A  Y  K  E  A  H  I  C </second_frame>
            <third_frame>   Y  L  V  R  A  N  H  H  T  Y  D  V  V  L  K  V  S  S  F  L  C  I  P  L  D  K  :  V  F  F  K  R  S  R  G  *  G  G  N  H  H  Y  P  C  F  C  N  *  E  D  F  *  S  M  W  S  S  L  I  I  L  C  C  *  *  *  L  V  V  C  L  A  L  S  N  N  G  C  C  W  F  F  A  V  V  P  L  L  G  D  L  Q  E  P  *  A  P  *  E  I  F  A  Y  T   : E  H  T  W  K  E  Q  V  A  F  L  L  H  E  S  V  I  F  F  I   : T  A  G  L  L  E  H  P  S  L  K  R  I  A  S  E  E  T  C  A  P  I  *  K  Q  F  V  E  V  *  F  F  P  K  T  *  P  S  F  *  H  F  C  K  E  C  C  Y  Y  T  E  K  :  I  I  Q  *  L  T  R  K  P  T  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60550" stop="60648"/>
                    <exon start="61029" stop="61088"/>
                    <exon start="61466" stop="61620"/>
                    <exon start="62070" stop="62103"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>348</number_coding_nucleotides>
                  <number_encoded_amino_acids>116</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LCPIMVAAGSLQLSHYWGTCKNHERLKKYSPIQNTLGRNRWRSCCTNLSSFSSRQDSWSIHHSRGLQVKKHVLPYRSNLLKCNSFLKPDQAFDISVKNAAIILKRSYNSLQGSPHL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="64705" PGL_stop="67765"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="64705" e_stop="64725"/>
            <exon e_start="64814" e_stop="64927"/>
            <exon e_start="65826" e_stop="65882"/>
            <exon e_start="66647" e_stop="67765"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.217" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.686" acc_prob="0.936" e_score="1.000"/>
          <exon-intron don_prob="0.627" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="64705" e_stop="64725" e_length="21"/>
          </exon>
          <intron i_serial="1" don_prob="0.217" acc_prob="0.997">
            <gDNA_intron_boundary i_start="64726" i_stop="64813" i_length="88"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64814" e_stop="64927" e_length="114"/>
          </exon>
          <intron i_serial="2" don_prob="0.686" acc_prob="0.936">
            <gDNA_intron_boundary i_start="64928" i_stop="65825" i_length="898"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="65826" e_stop="65882" e_length="57"/>
          </exon>
          <intron i_serial="3" don_prob="0.627" acc_prob="0.974">
            <gDNA_intron_boundary i_start="65883" i_stop="66646" i_length="764"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="66647" e_stop="67765" e_length="1119"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="64705" stop="64725"/>
              <exon start="64814" stop="64927"/>
              <exon start="65826" stop="65882"/>
              <exon start="66647" stop="67765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321348" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGGATGTCAGTAAGATAAAT : AATATTGTAGCTGACATGCGCAAAGTTTTGGCAAAGAATCCCCAAGTTGAGCAACAGAGGTTACATAGAAGAGTGTTCCTGGAGAATGTCAACCCTGAAAATCAAGCTCTGTTG : ATCTTAATATCCTGCTTTGTCAAGACATCACACTTCGAGGAATACTTGTGTGTCAAG : GAAGCAATTTTGTTAGATCTTCTCAGAGTCATTCGACATCACCGAGCTCGGCTTGCTACTCCCATCCGTACAGTTCAGAAAATATATAGTGATGCTGACTTGGACAACATGACATATGATTCTGCCTTCAGTCGTGGAGCAGCATCAACTCGTCCGTTGCTACTGATTGAGCCATCTTATAAAGTCAATGGGGAAGATCGCACAAAAGGTCGACCAATTCGCGTGAATGGTGAAGAAGATACCAAGGAAAAGGCTACCATGAAACCGGCACCTGACAGCAAGGTTGAAACCAAGAGCAGACCTGCATCTGATCCTAAAATCAAAGAAACACTTCCAGCTAACTCTAATGGTAAGGATGTGCCACTTTCTGACTTGAAACTTGATCCCAAAGTTGACAAAATGGCACATGCTGAATCCAAAGATGACATTAAAGCATCGTCTGATCCAAAATCGAGTAAAGCAACAGTGAAAAACACTTCACAACCGGTCCCAAAAGCTGAGCTTAAGTCTGCAGAAGTTGGTACTTCTGATTCCAAAGATCCTCCAGAGAACATCTCTAGCAACAAGCAAGTTGAGAAGGTAAGCCAGGGGATTGGTCGCACGACAAATGTAGTTGATAATTCCGCAACTTCTCCATCAGATGTTAGAGAGAAAACAGGAAATGTCCCATCTACTTCACTACCTAAGAGAGAAGATGAAAAACAACAAGTCTCACAACCATCTGTGCCATCGAAACCTGCATTGGAAGAGAACATTGTTCTTGGTGTTGCTCTCGAGGGTTCAAAAAGAACCCTTCCAATTGAAGAAGAGCTGTCTCCCCCACCAAATCCAGCAGAATCGAAGGAAATGGCTACTAGCCGTAGTAGTAGTAATGCTTCTACCATTGCAGAGAAAGATAAACAAGACGGGCAGCGTTCAAACAGACCTAATTCTACAGCTCCCGATCAGTCGAGTAAAGACAATTGATCCACCTATGTTTTCACTAACAGTTCATGTGACACTAATTCATTGTCAACACCAGATTTGATGTTACATGGTCCATTGAAAAGAGTTGTCTTGATTTCCAGGATAGTGAAGTATTTAGCCTATCACTCTAGTATAAAATTGGTCAACTTATAG</gDNA_template>
            <first_frame> L  D  V  S  K  I  N  :  N  I  V  A  D  M  R  K  V  L  A  K  N  P  Q  V  E  Q  Q  R  L  H  R  R  V  F  L  E  N  V  N  P  E  N  Q  A  L  L  :  I  L  I  S  C  F  V  K  T  S  H  F  E  E  Y  L  C  V  K  :  E  A  I  L  L  D  L  L  R  V  I  R  H  H  R  A  R  L  A  T  P  I  R  T  V  Q  K  I  Y  S  D  A  D  L  D  N  M  T  Y  D  S  A  F  S  R  G  A  A  S  T  R  P  L  L  L  I  E  P  S  Y  K  V  N  G  E  D  R  T  K  G  R  P  I  R  V  N  G  E  E  D  T  K  E  K  A  T  M  K  P  A  P  D  S  K  V  E  T  K  S  R  P  A  S  D  P  K  I  K  E  T  L  P  A  N  S  N  G  K  D  V  P  L  S  D  L  K  L  D  P  K  V  D  K  M  A  H  A  E  S  K  D  D  I  K  A  S  S  D  P  K  S  S  K  A  T  V  K  N  T  S  Q  P  V  P  K  A  E  L  K  S  A  E  V  G  T  S  D  S  K  D  P  P  E  N  I  S  S  N  K  Q  V  E  K  V  S  Q  G  I  G  R  T  T  N  V  V  D  N  S  A  T  S  P  S  D  V  R  E  K  T  G  N  V  P  S  T  S  L  P  K  R  E  D  E  K  Q  Q  V  S  Q  P  S  V  P  S  K  P  A  L  E  E  N  I  V  L  G  V  A  L  E  G  S  K  R  T  L  P  I  E  E  E  L  S  P  P  P  N  P  A  E  S  K  E  M  A  T  S  R  S  S  S  N  A  S  T  I  A  E  K  D  K  Q  D  G  Q  R  S  N  R  P  N  S  T  A  P  D  Q  S  S  K  D  N  *  S  T  Y  V  F  T  N  S  S  C  D  T  N  S  L  S  T  P  D  L  M  L  H  G  P  L  K  R  V  V  L  I  S  R  I  V  K  Y  L  A  Y  H  S  S  I  K  L  V  N  L  * </first_frame>
            <second_frame>  W  M  S  V  R  *  I :   I  L  *  L  T  C  A  K  F  W  Q  R  I  P  K  L  S  N  R  G  Y  I  E  E  C  S  W  R  M  S  T  L  K  I  K  L  C  * :   S  *  Y  P  A  L  S  R  H  H  T  S  R  N  T  C  V  S  R :   K  Q  F  C  *  I  F  S  E  S  F  D  I  T  E  L  G  L  L  L  P  S  V  Q  F  R  K  Y  I  V  M  L  T  W  T  T  *  H  M  I  L  P  S  V  V  E  Q  H  Q  L  V  R  C  Y  *  L  S  H  L  I  K  S  M  G  K  I  A  Q  K  V  D  Q  F  A  *  M  V  K  K  I  P  R  K  R  L  P  *  N  R  H  L  T  A  R  L  K  P  R  A  D  L  H  L  I  L  K  S  K  K  H  F  Q  L  T  L  M  V  R  M  C  H  F  L  T  *  N  L  I  P  K  L  T  K  W  H  M  L  N  P  K  M  T  L  K  H  R  L  I  Q  N  R  V  K  Q  Q  *  K  T  L  H  N  R  S  Q  K  L  S  L  S  L  Q  K  L  V  L  L  I  P  K  I  L  Q  R  T  S  L  A  T  S  K  L  R  R  *  A  R  G  L  V  A  R  Q  M  *  L  I  I  P  Q  L  L  H  Q  M  L  E  R  K  Q  E  M  S  H  L  L  H  Y  L  R  E  K  M  K  N  N  K  S  H  N  H  L  C  H  R  N  L  H  W  K  R  T  L  F  L  V  L  L  S  R  V  Q  K  E  P  F  Q  L  K  K  S  C  L  P  H  Q  I  Q  Q  N  R  R  K  W  L  L  A  V  V  V  V  M  L  L  P  L  Q  R  K  I  N  K  T  G  S  V  Q  T  D  L  I  L  Q  L  P  I  S  R  V  K  T  I  D  P  P  M  F  S  L  T  V  H  V  T  L  I  H  C  Q  H  Q  I  *  C  Y  M  V  H  *  K  E  L  S  *  F  P  G  *  *  S  I  *  P  I  T  L  V  *  N  W  S  T  Y   </second_frame>
            <third_frame>   G  C  Q  *  D  K   : *  Y  C  S  *  H  A  Q  S  F  G  K  E  S  P  S  *  A  T  E  V  T  *  K  S  V  P  G  E  C  Q  P  *  K  S  S  S  V   : D  L  N  I  L  L  C  Q  D  I  T  L  R  G  I  L  V  C  Q   : G  S  N  F  V  R  S  S  Q  S  H  S  T  S  P  S  S  A  C  Y  S  H  P  Y  S  S  E  N  I  *  *  C  *  L  G  Q  H  D  I  *  F  C  L  Q  S  W  S  S  I  N  S  S  V  A  T  D  *  A  I  L  *  S  Q  W  G  R  S  H  K  R  S  T  N  S  R  E  W  *  R  R  Y  Q  G  K  G  Y  H  E  T  G  T  *  Q  Q  G  *  N  Q  E  Q  T  C  I  *  S  *  N  Q  R  N  T  S  S  *  L  *  W  *  G  C  A  T  F  *  L  E  T  *  S  Q  S  *  Q  N  G  T  C  *  I  Q  R  *  H  *  S  I  V  *  S  K  I  E  *  S  N  S  E  K  H  F  T  T  G  P  K  S  *  A  *  V  C  R  S  W  Y  F  *  F  Q  R  S  S  R  E  H  L  *  Q  Q  A  S  *  E  G  K  P  G  D  W  S  H  D  K  C  S  *  *  F  R  N  F  S  I  R  C  *  R  E  N  R  K  C  P  I  Y  F  T  T  *  E  R  R  *  K  T  T  S  L  T  T  I  C  A  I  E  T  C  I  G  R  E  H  C  S  W  C  C  S  R  G  F  K  K  N  P  S  N  *  R  R  A  V  S  P  T  K  S  S  R  I  E  G  N  G  Y  *  P  *  *  *  *  C  F  Y  H  C  R  E  R  *  T  R  R  A  A  F  K  Q  T  *  F  Y  S  S  R  S  V  E  *  R  Q  L  I  H  L  C  F  H  *  Q  F  M  *  H  *  F  I  V  N  T  R  F  D  V  T  W  S  I  E  K  S  C  L  D  F  Q  D  S  E  V  F  S  L  S  L  *  Y  K  I  G  Q  L  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="64705" stop="64725"/>
                    <exon start="64814" stop="64927"/>
                    <exon start="65826" stop="65882"/>
                    <exon start="66647" stop="67612"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1155</number_coding_nucleotides>
                  <number_encoded_amino_acids>385</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LDVSKINNIVADMRKVLAKNPQVEQQRLHRRVFLENVNPENQALLILISCFVKTSHFEEYLCVKEAILLDLLRVIRHHRARLATPIRTVQKIYSDADLDNMTYDSAFSRGAASTRPLLLIEPSYKVNGEDRTKGRPIRVNGEEDTKEKATMKPAPDSKVETKSRPASDPKIKETLPANSNGKDVPLSDLKLDPKVDKMAHAESKDDIKASSDPKSSKATVKNTSQPVPKAELKSAEVGTSDSKDPPENISSNKQVEKVSQGIGRTTNVVDNSATSPSDVREKTGNVPSTSLPKREDEKQQVSQPSVPSKPALEENIVLGVALEGSKRTLPIEEELSPPPNPAESKEMATSRSSSNASTIAEKDKQDGQRSNRPNSTAPDQSSKDN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="74372" PGL_stop="68344"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74372" e_stop="73808"/>
            <exon e_start="72056" e_stop="71994"/>
            <exon e_start="71891" e_stop="71810"/>
            <exon e_start="71660" e_stop="71590"/>
            <exon e_start="71462" e_stop="71374"/>
            <exon e_start="71294" e_stop="71091"/>
            <exon e_start="70706" e_stop="70436"/>
            <exon e_start="70200" e_stop="69973"/>
            <exon e_start="69858" e_stop="69661"/>
            <exon e_start="68913" e_stop="68344"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.963" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.680" e_score="1.000"/>
          <exon-intron don_prob="0.970" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.976" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.900" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.971" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="74372" e_stop="73808" e_length="565"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.996">
            <gDNA_intron_boundary i_start="73807" i_stop="72057" i_length="1751"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="72056" e_stop="71994" e_length="63"/>
          </exon>
          <intron i_serial="2" don_prob="0.963" acc_prob="0.982">
            <gDNA_intron_boundary i_start="71993" i_stop="71892" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="71891" e_stop="71810" e_length="82"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.984">
            <gDNA_intron_boundary i_start="71809" i_stop="71661" i_length="149"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="71660" e_stop="71590" e_length="71"/>
          </exon>
          <intron i_serial="4" don_prob="0.933" acc_prob="0.680">
            <gDNA_intron_boundary i_start="71589" i_stop="71463" i_length="127"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="71462" e_stop="71374" e_length="89"/>
          </exon>
          <intron i_serial="5" don_prob="0.970" acc_prob="0.986">
            <gDNA_intron_boundary i_start="71373" i_stop="71295" i_length="79"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="71294" e_stop="71091" e_length="204"/>
          </exon>
          <intron i_serial="6" don_prob="0.976" acc_prob="0.996">
            <gDNA_intron_boundary i_start="71090" i_stop="70707" i_length="384"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="70706" e_stop="70436" e_length="271"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.900">
            <gDNA_intron_boundary i_start="70435" i_stop="70201" i_length="235"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="70200" e_stop="69973" e_length="228"/>
          </exon>
          <intron i_serial="8" don_prob="0.967" acc_prob="0.983">
            <gDNA_intron_boundary i_start="69972" i_stop="69859" i_length="114"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="69858" e_stop="69661" e_length="198"/>
          </exon>
          <intron i_serial="9" don_prob="0.998" acc_prob="0.971">
            <gDNA_intron_boundary i_start="69660" i_stop="68914" i_length="747"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="68913" e_stop="68344" e_length="570"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74372" stop="73808"/>
              <exon start="72056" stop="71994"/>
              <exon start="71891" stop="71810"/>
              <exon start="71660" stop="71590"/>
              <exon start="71462" stop="71374"/>
              <exon start="71294" stop="71091"/>
              <exon start="70706" stop="70436"/>
              <exon start="70200" stop="69973"/>
              <exon start="69858" stop="69661"/>
              <exon start="68913" stop="68344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314017" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AATTGGTGTAAACACCTTTGCATCTTGATAATTGATAAAGACAACCCACCCCCAAAGCATTTACACTTCACAAAAACTAATTTTTGTAGCAGTAAAATCACTTCAGTGTGGCAGCTGTAAGCTTGCTGTTTGCTTGTTTGGTTTTATTATATGCATTGATTTTTGGTATATGTGTTGATATTATATGGAAGGGGAGAGATAGGTGCCCCCATGTGAGATGCTTTTACTGAGGCTCATAATGATATTGGCCCCTCTTTACTCTTCCTACTGATTCTTGATTTCTTTCTCTCTTTCTTCCTTGAAAAAAGATTGCTTTTTTTCTTTCTTGTATTCCTTACTTTCAAGTTTTTGAGAGTTTTTAGGCACACCCTTTTCTTTATTTTGCTTTATATTTTCATTAGGGGGGTGAGCCAAATACCAAAAATACACTGCAGCAAGAAGAAGAAGAAGAGAAAGCAGCATGAGTGGAAATCATAGAGGAGGGGGTGCTATGGCTGGTCTTATTGTGGTTCTTTTGACTGTTTACTTTACTACTTTTAGCTATGGCTCACCCACCATTCTTTCT : GATTTGAATGCTCCAAAATTCAGGCACTCACGTCTTGCGAAGAGTGCTATACAACGCCAAACT : TCCAATGAAGAACAGTCACGGCTTTGGACACCTTTGGAACACCAAGGATGGAAACCTTGTACTAAATCTGATGCTGCATCCA : CAGTACCTGAAAAATCTGAGGGATACGTTCAAGTGTTCCTTGATGGTGGACTAAATCAACAGAGGATGGGG : ATCTGTGATGCAGTTGTCGTTGCCAAAATTCTGAATGCCACACTTGTGATCCCTCAGTTGGAAGTAAATCCTGTTTGGCAAGATTCAAG : CTCATTCGAGGATATCTTTGATGTGGATCACTTCATCAATGCATTGAAAGACGACGTAGCTATAGTCAAAGAGTTGCCTGATGAATTCTCTTGGAGCACACGAGAATATTATGGCATAGCTATCCGACCTACAAGAATCAAGACTGCTCCAGTTCATGCTTCAGCAAATTGGTATTTAGAGAATGTGTCACCTGTACTGCAGAG : TTATGGAATTGCTGCCATAGCTCCATTTTCTCACCGACTGACATTTGACAACATGCCCAAGTACCTCCAACACCTACGATGTAAAGTCAACTTTCAAGCATTGGCCTTTGTTCCTCACATCAGACAACTCGGGGATGCCCTTATCACTCGCCTTAGGTTTCCTCCTAGTGAAGACAACATGGTTAGTAACAACTACCTTAGAGAGGTTACTGATCTAAAGCCCAAACAAGGAGTTGGCAAGTTTGCTGTTCTTCACCTTCGCTTTGACAAG : GATATGGCTGCTCATTCAGCCTGTGATTTTGGTGGCGGCAAGGCTGAAAATTTGGCTCTAGCTAAATACAGGCAAGTAATTTGGGGAGGAAGGGTCATCAACTCTCAATTTACTGATGAAGAATTAAGGAGTCAAGGAAGGTGCCCATTGACTCCCGAAGAAGTTGGATTGCTGCTGGCAGCTTTGGGATTTGACAACAACACTCGCCTATATCTTGCCTCCCATAAG : GTTTATGGCGGGGAACGCAGGGTTTCAGCCTTAAGAAGTTTGTTTCCCCTGATGGAAGATAAAAAGAGCCTTGCTTCTTCTGAGGAAAGAGCTCTTATCAAAGGAAAGGCTTCATTATTGGCTGCAGTTGATTATTATGTTGGCATGCACAGTGATATTTTTGTTTCCGCCTCCCCTGGAAATATGCACAATGCAATG : GTCGGACAGAGAACATACAACAATATGAAGACAATAAGGCCAAATATGGCATTGTTAGGCCAGCTTTTCTTGAACAAGACACTCACTTGGCCTGAGTTTCAAGAATCAGTAATTGAAGGGCACCAAAACAGACAAGGCCAAATCAGACTCCGCAAACCCAAGCAATCCCTCTATACATATCCTGCTCCTGATTGTATGTGCCAAGCTTGAGAGGGCCTACCATATAGATCTTTATCACTATTTGTTTGGACATCAAATTATTGTTTATTATGCCTTATATTATAGTTATAAATAAGATGCCACCCCTTTTGTTGACTTGTAGGGGGTAATTTATATTTATGTGTCACCACGTTGAGATTTTACGGTAGGGGTGGAAGGAATATGTTGTACAATATGTGTATTACTCCTATGAAGAGTGCATATACAGATAGTAGTATTCTAGTCTTGACAGATATATTTTACTATGTAATGTCAGTTCTTGTAGTTTATTCAAAAGGGTGGTTTGTTTCATTTGGTTGATGTAGCAGAGGTTGATAATATTATCAAATGGCAGCTAGTGGAATTGATTTC</gDNA_template>
            <first_frame> N  W  C  K  H  L  C  I  L  I  I  D  K  D  N  P  P  P  K  H  L  H  F  T  K  T  N  F  C  S  S  K  I  T  S  V  W  Q  L  *  A  C  C  L  L  V  W  F  Y  Y  M  H  *  F  L  V  Y  V  L  I  L  Y  G  R  G  E  I  G  A  P  M  *  D  A  F  T  E  A  H  N  D  I  G  P  S  L  L  F  L  L  I  L  D  F  F  L  S  F  F  L  E  K  R  L  L  F  F  F  L  V  F  L  T  F  K  F  L  R  V  F  R  H  T  L  F  F  I  L  L  Y  I  F  I  R  G  V  S  Q  I  P  K  I  H  C  S  K  K  K  K  K  R  K  Q  H  E  W  K  S  *  R  R  G  C  Y  G  W  S  Y  C  G  S  F  D  C  L  L  Y  Y  F  *  L  W  L  T  H  H  S  F   : *  F  E  C  S  K  I  Q  A  L  T  S  C  E  E  C  Y  T  T  P  N   : F  Q  *  R  T  V  T  A  L  D  T  F  G  T  P  R  M  E  T  L  Y  *  I  *  C  C  I  H :   S  T  *  K  I  *  G  I  R  S  S  V  P  *  W  W  T  K  S  T  E  D  G   : D  L  *  C  S  C  R  C  Q  N  S  E  C  H  T  C  D  P  S  V  G  S  K  S  C  L  A  R  F  K  :  L  I  R  G  Y  L  *  C  G  S  L  H  Q  C  I  E  R  R  R  S  Y  S  Q  R  V  A  *  *  I  L  L  E  H  T  R  I  L  W  H  S  Y  P  T  Y  K  N  Q  D  C  S  S  S  C  F  S  K  L  V  F  R  E  C  V  T  C  T  A  E  :  L  W  N  C  C  H  S  S  I  F  S  P  T  D  I  *  Q  H  A  Q  V  P  P  T  P  T  M  *  S  Q  L  S  S  I  G  L  C  S  S  H  Q  T  T  R  G  C  P  Y  H  S  P  *  V  S  S  *  *  R  Q  H  G  *  *  Q  L  P  *  R  G  Y  *  S  K  A  Q  T  R  S  W  Q  V  C  C  S  S  P  S  L  *  Q   : G  Y  G  C  S  F  S  L  *  F  W  W  R  Q  G  *  K  F  G  S  S  *  I  Q  A  S  N  L  G  R  K  G  H  Q  L  S  I  Y  *  *  R  I  K  E  S  R  K  V  P  I  D  S  R  R  S  W  I  A  A  G  S  F  G  I  *  Q  Q  H  S  P  I  S  C  L  P  *   : G  L  W  R  G  T  Q  G  F  S  L  K  K  F  V  S  P  D  G  R  *  K  E  P  C  F  F  *  G  K  S  S  Y  Q  R  K  G  F  I  I  G  C  S  *  L  L  C  W  H  A  Q  *  Y  F  C  F  R  L  P  W  K  Y  A  Q  C  N   : G  R  T  E  N  I  Q  Q  Y  E  D  N  K  A  K  Y  G  I  V  R  P  A  F  L  E  Q  D  T  H  L  A  *  V  S  R  I  S  N  *  R  A  P  K  Q  T  R  P  N  Q  T  P  Q  T  Q  A  I  P  L  Y  I  S  C  S  *  L  Y  V  P  S  L  R  G  P  T  I  *  I  F  I  T  I  C  L  D  I  K  L  L  F  I  M  P  Y  I  I  V  I  N  K  M  P  P  L  L  L  T  C  R  G  *  F  I  F  M  C  H  H  V  E  I  L  R  *  G  W  K  E  Y  V  V  Q  Y  V  Y  Y  S  Y  E  E  C  I  Y  R  *  *  Y  S  S  L  D  R  Y  I  L  L  C  N  V  S  S  C  S  L  F  K  R  V  V  C  F  I  W  L  M  *  Q  R  L  I  I  L  S  N  G  S  *  W  N  *  F  </first_frame>
            <second_frame>  I  G  V  N  T  F  A  S  *  *  L  I  K  T  T  H  P  Q  S  I  Y  T  S  Q  K  L  I  F  V  A  V  K  S  L  Q  C  G  S  C  K  L  A  V  C  L  F  G  F  I  I  C  I  D  F  W  Y  M  C  *  Y  Y  M  E  G  E  R  *  V  P  P  C  E  M  L  L  L  R  L  I  M  I  L  A  P  L  Y  S  S  Y  *  F  L  I  S  F  S  L  S  S  L  K  K  D  C  F  F  S  F  L  Y  S  L  L  S  S  F  *  E  F  L  G  T  P  F  S  L  F  C  F  I  F  S  L  G  G  *  A  K  Y  Q  K  Y  T  A  A  R  R  R  R  R  E  S  S  M  S  G  N  H  R  G  G  G  A  M  A  G  L  I  V  V  L  L  T  V  Y  F  T  T  F  S  Y  G  S  P  T  I  L  S  :  D  L  N  A  P  K  F  R  H  S  R  L  A  K  S  A  I  Q  R  Q  T  :  S  N  E  E  Q  S  R  L  W  T  P  L  E  H  Q  G  W  K  P  C  T  K  S  D  A  A  S   : T  V  P  E  K  S  E  G  Y  V  Q  V  F  L  D  G  G  L  N  Q  Q  R  M  G  :  I  C  D  A  V  V  V  A  K  I  L  N  A  T  L  V  I  P  Q  L  E  V  N  P  V  W  Q  D  S  S :   S  F  E  D  I  F  D  V  D  H  F  I  N  A  L  K  D  D  V  A  I  V  K  E  L  P  D  E  F  S  W  S  T  R  E  Y  Y  G  I  A  I  R  P  T  R  I  K  T  A  P  V  H  A  S  A  N  W  Y  L  E  N  V  S  P  V  L  Q  S :   Y  G  I  A  A  I  A  P  F  S  H  R  L  T  F  D  N  M  P  K  Y  L  Q  H  L  R  C  K  V  N  F  Q  A  L  A  F  V  P  H  I  R  Q  L  G  D  A  L  I  T  R  L  R  F  P  P  S  E  D  N  M  V  S  N  N  Y  L  R  E  V  T  D  L  K  P  K  Q  G  V  G  K  F  A  V  L  H  L  R  F  D  K  :  D  M  A  A  H  S  A  C  D  F  G  G  G  K  A  E  N  L  A  L  A  K  Y  R  Q  V  I  W  G  G  R  V  I  N  S  Q  F  T  D  E  E  L  R  S  Q  G  R  C  P  L  T  P  E  E  V  G  L  L  L  A  A  L  G  F  D  N  N  T  R  L  Y  L  A  S  H  K  :  V  Y  G  G  E  R  R  V  S  A  L  R  S  L  F  P  L  M  E  D  K  K  S  L  A  S  S  E  E  R  A  L  I  K  G  K  A  S  L  L  A  A  V  D  Y  Y  V  G  M  H  S  D  I  F  V  S  A  S  P  G  N  M  H  N  A  M  :  V  G  Q  R  T  Y  N  N  M  K  T  I  R  P  N  M  A  L  L  G  Q  L  F  L  N  K  T  L  T  W  P  E  F  Q  E  S  V  I  E  G  H  Q  N  R  Q  G  Q  I  R  L  R  K  P  K  Q  S  L  Y  T  Y  P  A  P  D  C  M  C  Q  A  *  E  G  L  P  Y  R  S  L  S  L  F  V  W  T  S  N  Y  C  L  L  C  L  I  L  *  L  *  I  R  C  H  P  F  C  *  L  V  G  G  N  L  Y  L  C  V  T  T  L  R  F  Y  G  R  G  G  R  N  M  L  Y  N  M  C  I  T  P  M  K  S  A  Y  T  D  S  S  I  L  V  L  T  D  I  F  Y  Y  V  M  S  V  L  V  V  Y  S  K  G  W  F  V  S  F  G  *  C  S  R  G  *  *  Y  Y  Q  M  A  A  S  G  I  D  F </second_frame>
            <third_frame>   L  V  *  T  P  L  H  L  D  N  *  *  R  Q  P  T  P  K  A  F  T  L  H  K  N  *  F  L  *  Q  *  N  H  F  S  V  A  A  V  S  L  L  F  A  C  L  V  L  L  Y  A  L  I  F  G  I  C  V  D  I  I  W  K  G  R  D  R  C  P  H  V  R  C  F  Y  *  G  S  *  *  Y  W  P  L  F  T  L  P  T  D  S  *  F  L  S  L  F  L  P  *  K  K  I  A  F  F  L  S  C  I  P  Y  F  Q  V  F  E  S  F  *  A  H  P  F  L  Y  F  A  L  Y  F  H  *  G  G  E  P  N  T  K  N  T  L  Q  Q  E  E  E  E  E  K  A  A  *  V  E  I  I  E  E  G  V  L  W  L  V  L  L  W  F  F  *  L  F  T  L  L  L  L  A  M  A  H  P  P  F  F  L :   I  *  M  L  Q  N  S  G  T  H  V  L  R  R  V  L  Y  N  A  K  L :   P  M  K  N  S  H  G  F  G  H  L  W  N  T  K  D  G  N  L  V  L  N  L  M  L  H  P  :  Q  Y  L  K  N  L  R  D  T  F  K  C  S  L  M  V  D  *  I  N  R  G  W  G :   S  V  M  Q  L  S  L  P  K  F  *  M  P  H  L  *  S  L  S  W  K  *  I  L  F  G  K  I  Q   : A  H  S  R  I  S  L  M  W  I  T  S  S  M  H  *  K  T  T  *  L  *  S  K  S  C  L  M  N  S  L  G  A  H  E  N  I  M  A  *  L  S  D  L  Q  E  S  R  L  L  Q  F  M  L  Q  Q  I  G  I  *  R  M  C  H  L  Y  C  R   : V  M  E  L  L  P  *  L  H  F  L  T  D  *  H  L  T  T  C  P  S  T  S  N  T  Y  D  V  K  S  T  F  K  H  W  P  L  F  L  T  S  D  N  S  G  M  P  L  S  L  A  L  G  F  L  L  V  K  T  T  W  L  V  T  T  T  L  E  R  L  L  I  *  S  P  N  K  E  L  A  S  L  L  F  F  T  F  A  L  T  R :   I  W  L  L  I  Q  P  V  I  L  V  A  A  R  L  K  I  W  L  *  L  N  T  G  K  *  F  G  E  E  G  S  S  T  L  N  L  L  M  K  N  *  G  V  K  E  G  A  H  *  L  P  K  K  L  D  C  C  W  Q  L  W  D  L  T  T  T  L  A  Y  I  L  P  P  I  R :   F  M  A  G  N  A  G  F  Q  P  *  E  V  C  F  P  *  W  K  I  K  R  A  L  L  L  L  R  K  E  L  L  S  K  E  R  L  H  Y  W  L  Q  L  I  I  M  L  A  C  T  V  I  F  L  F  P  P  P  L  E  I  C  T  M  Q  W :   S  D  R  E  H  T  T  I  *  R  Q  *  G  Q  I  W  H  C  *  A  S  F  S  *  T  R  H  S  L  G  L  S  F  K  N  Q  *  L  K  G  T  K  T  D  K  A  K  S  D  S  A  N  P  S  N  P  S  I  H  I  L  L  L  I  V  C  A  K  L  E  R  A  Y  H  I  D  L  Y  H  Y  L  F  G  H  Q  I  I  V  Y  Y  A  L  Y  Y  S  Y  K  *  D  A  T  P  F  V  D  L  *  G  V  I  Y  I  Y  V  S  P  R  *  D  F  T  V  G  V  E  G  I  C  C  T  I  C  V  L  L  L  *  R  V  H  I  Q  I  V  V  F  *  S  *  Q  I  Y  F  T  M  *  C  Q  F  L  *  F  I  Q  K  G  G  L  F  H  L  V  D  V  A  E  V  D  N  I  I  K  W  Q  L  V  E  L  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73963" stop="73808"/>
                    <exon start="72056" stop="71994"/>
                    <exon start="71891" stop="71810"/>
                    <exon start="71660" stop="71590"/>
                    <exon start="71462" stop="71374"/>
                    <exon start="71294" stop="71091"/>
                    <exon start="70706" stop="70436"/>
                    <exon start="70200" stop="69973"/>
                    <exon start="69858" stop="69661"/>
                    <exon start="68913" stop="68704"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1569</number_coding_nucleotides>
                  <number_encoded_amino_acids>523</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AKYQKYTAARRRRRESSMSGNHRGGGAMAGLIVVLLTVYFTTFSYGSPTILSDLNAPKFRHSRLAKSAIQRQTSNEEQSRLWTPLEHQGWKPCTKSDAASTVPEKSEGYVQVFLDGGLNQQRMGICDAVVVAKILNATLVIPQLEVNPVWQDSSSFEDIFDVDHFINALKDDVAIVKELPDEFSWSTREYYGIAIRPTRIKTAPVHASANWYLENVSPVLQSYGIAAIAPFSHRLTFDNMPKYLQHLRCKVNFQALAFVPHIRQLGDALITRLRFPPSEDNMVSNNYLREVTDLKPKQGVGKFAVLHLRFDKDMAAHSACDFGGGKAENLALAKYRQVIWGGRVINSQFTDEELRSQGRCPLTPEEVGLLLAALGFDNNTRLYLASHKVYGGERRVSALRSLFPLMEDKKSLASSEERALIKGKASLLAAVDYYVGMHSDIFVSASPGNMHNAMVGQRTYNNMKTIRPNMALLGQLFLNKTLTWPEFQESVIEGHQNRQGQIRLRKPKQSLYTYPAPDCMCQA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68598" stop="68395"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVGGNLYLCVTTLRFYGRGGRNMLYNMCITPMKSAYTDSSILVLTDIFYYVMSVLVVYSKGWFVSFG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="71218" e_stop="70541"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="71218" e_stop="70541" e_length="678"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71218" stop="70541"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U314016" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CCTGATGAATTCTCTTGGAGCACACGAGAATATTATGGCATAGCTATCCGACCTACAAGAATCAAGACTGCTCCAGTTCATGCTTCAGCAAATTGGTATTTAGAGAATGTGTCACCTGTACTGCAGAGGTTAGTCACAACATTGTTTTTTTTGAAGATTTTGGTCTAGTTGTATGATAGTCATGTAAACTGTGTTCAGTCTCTCAACCCACCCGTATGACAAAGTACATGTATAATTGGTAAATTACTGGCAGGATTTAGTGCTCAAAACTTAAGGGAATTCTACAAAAGTTCCATTGCCCAGTATTTTACTATTCATTTTAAGTTGTATGTTCCCTTAAACCAAAAATTTAAGTTAGGCATGGACTAAACATTATGTGTTTGATTTATTTCTTGATATGATCATATTTTGTTCGTTCAGTTATTAGCTTCTGAAGGTAGTAATTCTCTTATCAGCCTTTTGCTGGAATTTGTGACATTGCTTTGTATATTAATATTTTATGAATGGATCAGTTATGGAATTGCTGCCATAGCTCCATTTTCTCACCGACTGACATTTGACAACATGCCCAAGTACCTCCAACACCTACGATGTAAAGTCAACTTTCAAGCATTGGCCTTTGTTCCTCACATCAGACAACTCGGGGATGCCCTTATCACTCGCCTTAGGTTTCCTCCT</gDNA_template>
            <first_frame> P  D  E  F  S  W  S  T  R  E  Y  Y  G  I  A  I  R  P  T  R  I  K  T  A  P  V  H  A  S  A  N  W  Y  L  E  N  V  S  P  V  L  Q  R  L  V  T  T  L  F  F  L  K  I  L  V  *  L  Y  D  S  H  V  N  C  V  Q  S  L  N  P  P  V  *  Q  S  T  C  I  I  G  K  L  L  A  G  F  S  A  Q  N  L  R  E  F  Y  K  S  S  I  A  Q  Y  F  T  I  H  F  K  L  Y  V  P  L  N  Q  K  F  K  L  G  M  D  *  T  L  C  V  *  F  I  S  *  Y  D  H  I  L  F  V  Q  L  L  A  S  E  G  S  N  S  L  I  S  L  L  L  E  F  V  T  L  L  C  I  L  I  F  Y  E  W  I  S  Y  G  I  A  A  I  A  P  F  S  H  R  L  T  F  D  N  M  P  K  Y  L  Q  H  L  R  C  K  V  N  F  Q  A  L  A  F  V  P  H  I  R  Q  L  G  D  A  L  I  T  R  L  R  F  P  P </first_frame>
            <second_frame>  L  M  N  S  L  G  A  H  E  N  I  M  A  *  L  S  D  L  Q  E  S  R  L  L  Q  F  M  L  Q  Q  I  G  I  *  R  M  C  H  L  Y  C  R  G  *  S  Q  H  C  F  F  *  R  F  W  S  S  C  M  I  V  M  *  T  V  F  S  L  S  T  H  P  Y  D  K  V  H  V  *  L  V  N  Y  W  Q  D  L  V  L  K  T  *  G  N  S  T  K  V  P  L  P  S  I  L  L  F  I  L  S  C  M  F  P  *  T  K  N  L  S  *  A  W  T  K  H  Y  V  F  D  L  F  L  D  M  I  I  F  C  S  F  S  Y  *  L  L  K  V  V  I  L  L  S  A  F  C  W  N  L  *  H  C  F  V  Y  *  Y  F  M  N  G  S  V  M  E  L  L  P  *  L  H  F  L  T  D  *  H  L  T  T  C  P  S  T  S  N  T  Y  D  V  K  S  T  F  K  H  W  P  L  F  L  T  S  D  N  S  G  M  P  L  S  L  A  L  G  F  L   </second_frame>
            <third_frame>   *  *  I  L  L  E  H  T  R  I  L  W  H  S  Y  P  T  Y  K  N  Q  D  C  S  S  S  C  F  S  K  L  V  F  R  E  C  V  T  C  T  A  E  V  S  H  N  I  V  F  F  E  D  F  G  L  V  V  *  *  S  C  K  L  C  S  V  S  Q  P  T  R  M  T  K  Y  M  Y  N  W  *  I  T  G  R  I  *  C  S  K  L  K  G  I  L  Q  K  F  H  C  P  V  F  Y  Y  S  F  *  V  V  C  S  L  K  P  K  I  *  V  R  H  G  L  N  I  M  C  L  I  Y  F  L  I  *  S  Y  F  V  R  S  V  I  S  F  *  R  *  *  F  S  Y  Q  P  F  A  G  I  C  D  I  A  L  Y  I  N  I  L  *  M  D  Q  L  W  N  C  C  H  S  S  I  F  S  P  T  D  I  *  Q  H  A  Q  V  P  P  T  P  T  M  *  S  Q  L  S  S  I  G  L  C  S  S  H  Q  T  T  R  G  C  P  Y  H  S  P  *  V  S  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="70822" stop="70541"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>282</number_coding_nucleotides>
                  <number_encoded_amino_acids>94</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>YDHILFVQLLASEGSNSLISLLLEFVTLLCILIFYEWISYGIAAIAPFSHRLTFDNMPKYLQHLRCKVNFQALAFVPHIRQLGDALITRLRFPP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="84928" PGL_stop="83393"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84928" e_stop="83393"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="84928" e_stop="83393" e_length="1536"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84928" stop="83393"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323297" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATTTTCACTGATTTAGTTGCTTAGTTCTACTACAATCATAAAGTGAAGCAGCCAGCATCGAAAATCTGTTTGTTTTGAGCAAAAAATGGGATCTGTTTCTTTGAAAATAGGTGATGGAACTGCTAGATTCAAGAAAGCTACATATTGTTCTTCAGTTCTAAATCTACTTATGCTTTTCTCTGTTGTTACAACTAATCTTTTTGCTTTATATGCTTTTACATCCTCACCCAAAAACCCCCATCATCATCTTCTTCTCCCACATACTCACAAGAACATATCTTTAATCTCAGAACAAGTTTCTTTAATTCTAAGACAGATTGATTCTTCACAAAAAAAACTTGCCCAAATGGAAAAAGAGCTTTTAGGCTATGAAAGTTTTGATCTTTCTAGTCCCAAAGTTCCAAATGAAGTGAGAAATTTCTTGCAACCCCATTTGCTGCCTTTGGGTAAAGATTCAAGAACTGGGATTACTGAAATGGTAGCTTCTATTGGACATTCTTGTGTGAAATCTTTAGATTTGCTTTCTCAGTTTATGAGTTATAAGGTTAATGGTCTTTGTCCTGATGATTGGAGTCTTGGGCAGAAGCTGATTCTTAGTGGCTGTGAGCCTTTGCCAAGAAGGAGGTGTTTTGCTAAGACAATACCTAAGGTTGGTTTACTTAAATTACCTGATTCATTTTGGGGAAATTATAGTGAAAAGATTTATAGTTGGAGTGGTCTTGGTTGTAAGAATGTAGCTTGTTTAAATGTTAAGAAATTGAATAGAGATTGTGCTGGTTGTTTTGATGTTGTAAGTAGTGGGGGGTATGAGAAGCAAAGATATGTTAAGGGTAGAGGGAAAAATGATTTCTTGATTGATGATGTATTGGGAATGCTGGGAAATGGTGGGGGAATTAGAATTGGATTTGATATTGGTGGTGGATCTGGTACATTTGCTGTTAGAATGGCTGAAAGGAATGTGACTATAGTTACTGCTACGTTGAATGTCGATGCACCATTTAACGAGTTCATTGCTGCACGGGGTGTATTCCCGTTGTATTTGAGTTTAGATCATCGGTTTCCCTTTCATGATAATGTGTTTGATTTGGTACATGTGGGAAATGTATTGGATGTGAGCGGACGTCCTGAGAAGTTAGAGTTTTTAGTGTTTGATATTGATAGAGTTTTGAGGGCTGGAGGGTTGTTTTGGTTGGATAACTTTCTTTGTTCAAATGAAGACAAGAAAACTGCATTAACGAGGCTGATCGAACGTTTTGGGTACAAAAAGCTTAAATGGGTTGTTGGTGAGAAGATCAATGGGTCGGGAAAATCTGAGGTTTATTTGTCTGCTGTTCTACAGAAACCAGTAAGAGTTTGATCGTATCGCGGGGTTTCTCATAGAAAAGCTGTGCATGTTCATTATTGACATAGAATAAGTGAACGTATTCGTCTTCTTTTACACAACTGCTAACCAGCATCATAGGAGGGAGGCGGGTTCGGCTTTGTGGCAGGTATTATATGTCTACGATCTCTAAGATTATTCACTTATCTTTGG</gDNA_template>
            <first_frame> L  F  S  L  I  *  L  L  S  S  T  T  I  I  K  *  S  S  Q  H  R  K  S  V  C  F  E  Q  K  M  G  S  V  S  L  K  I  G  D  G  T  A  R  F  K  K  A  T  Y  C  S  S  V  L  N  L  L  M  L  F  S  V  V  T  T  N  L  F  A  L  Y  A  F  T  S  S  P  K  N  P  H  H  H  L  L  L  P  H  T  H  K  N  I  S  L  I  S  E  Q  V  S  L  I  L  R  Q  I  D  S  S  Q  K  K  L  A  Q  M  E  K  E  L  L  G  Y  E  S  F  D  L  S  S  P  K  V  P  N  E  V  R  N  F  L  Q  P  H  L  L  P  L  G  K  D  S  R  T  G  I  T  E  M  V  A  S  I  G  H  S  C  V  K  S  L  D  L  L  S  Q  F  M  S  Y  K  V  N  G  L  C  P  D  D  W  S  L  G  Q  K  L  I  L  S  G  C  E  P  L  P  R  R  R  C  F  A  K  T  I  P  K  V  G  L  L  K  L  P  D  S  F  W  G  N  Y  S  E  K  I  Y  S  W  S  G  L  G  C  K  N  V  A  C  L  N  V  K  K  L  N  R  D  C  A  G  C  F  D  V  V  S  S  G  G  Y  E  K  Q  R  Y  V  K  G  R  G  K  N  D  F  L  I  D  D  V  L  G  M  L  G  N  G  G  G  I  R  I  G  F  D  I  G  G  G  S  G  T  F  A  V  R  M  A  E  R  N  V  T  I  V  T  A  T  L  N  V  D  A  P  F  N  E  F  I  A  A  R  G  V  F  P  L  Y  L  S  L  D  H  R  F  P  F  H  D  N  V  F  D  L  V  H  V  G  N  V  L  D  V  S  G  R  P  E  K  L  E  F  L  V  F  D  I  D  R  V  L  R  A  G  G  L  F  W  L  D  N  F  L  C  S  N  E  D  K  K  T  A  L  T  R  L  I  E  R  F  G  Y  K  K  L  K  W  V  V  G  E  K  I  N  G  S  G  K  S  E  V  Y  L  S  A  V  L  Q  K  P  V  R  V  *  S  Y  R  G  V  S  H  R  K  A  V  H  V  H  Y  *  H  R  I  S  E  R  I  R  L  L  L  H  N  C  *  P  A  S  *  E  G  G  G  F  G  F  V  A  G  I  I  C  L  R  S  L  R  L  F  T  Y  L  W </first_frame>
            <second_frame>  Y  F  H  *  F  S  C  L  V  L  L  Q  S  *  S  E  A  A  S  I  E  N  L  F  V  L  S  K  K  W  D  L  F  L  *  K  *  V  M  E  L  L  D  S  R  K  L  H  I  V  L  Q  F  *  I  Y  L  C  F  S  L  L  L  Q  L  I  F  L  L  Y  M  L  L  H  P  H  P  K  T  P  I  I  I  F  F  S  H  I  L  T  R  T  Y  L  *  S  Q  N  K  F  L  *  F  *  D  R  L  I  L  H  K  K  N  L  P  K  W  K  K  S  F  *  A  M  K  V  L  I  F  L  V  P  K  F  Q  M  K  *  E  I  S  C  N  P  I  C  C  L  W  V  K  I  Q  E  L  G  L  L  K  W  *  L  L  L  D  I  L  V  *  N  L  *  I  C  F  L  S  L  *  V  I  R  L  M  V  F  V  L  M  I  G  V  L  G  R  S  *  F  L  V  A  V  S  L  C  Q  E  G  G  V  L  L  R  Q  Y  L  R  L  V  Y  L  N  Y  L  I  H  F  G  E  I  I  V  K  R  F  I  V  G  V  V  L  V  V  R  M  *  L  V  *  M  L  R  N  *  I  E  I  V  L  V  V  L  M  L  *  V  V  G  G  M  R  S  K  D  M  L  R  V  E  G  K  M  I  S  *  L  M  M  Y  W  E  C  W  E  M  V  G  E  L  E  L  D  L  I  L  V  V  D  L  V  H  L  L  L  E  W  L  K  G  M  *  L  *  L  L  L  R  *  M  S  M  H  H  L  T  S  S  L  L  H  G  V  Y  S  R  C  I  *  V  *  I  I  G  F  P  F  M  I  M  C  L  I  W  Y  M  W  E  M  Y  W  M  *  A  D  V  L  R  S  *  S  F  *  C  L  I  L  I  E  F  *  G  L  E  G  C  F  G  W  I  T  F  F  V  Q  M  K  T  R  K  L  H  *  R  G  *  S  N  V  L  G  T  K  S  L  N  G  L  L  V  R  R  S  M  G  R  E  N  L  R  F  I  C  L  L  F  Y  R  N  Q  *  E  F  D  R  I  A  G  F  L  I  E  K  L  C  M  F  I  I  D  I  E  *  V  N  V  F  V  F  F  Y  T  T  A  N  Q  H  H  R  R  E  A  G  S  A  L  W  Q  V  L  Y  V  Y  D  L  *  D  Y  S  L  I  F   </second_frame>
            <third_frame>   I  F  T  D  L  V  A  *  F  Y  Y  N  H  K  V  K  Q  P  A  S  K  I  C  L  F  *  A  K  N  G  I  C  F  F  E  N  R  *  W  N  C  *  I  Q  E  S  Y  I  L  F  F  S  S  K  S  T  Y  A  F  L  C  C  Y  N  *  S  F  C  F  I  C  F  Y  I  L  T  Q  K  P  P  S  S  S  S  S  P  T  Y  S  Q  E  H  I  F  N  L  R  T  S  F  F  N  S  K  T  D  *  F  F  T  K  K  T  C  P  N  G  K  R  A  F  R  L  *  K  F  *  S  F  *  S  Q  S  S  K  *  S  E  K  F  L  A  T  P  F  A  A  F  G  *  R  F  K  N  W  D  Y  *  N  G  S  F  Y  W  T  F  L  C  E  I  F  R  F  A  F  S  V  Y  E  L  *  G  *  W  S  L  S  *  *  L  E  S  W  A  E  A  D  S  *  W  L  *  A  F  A  K  K  E  V  F  C  *  D  N  T  *  G  W  F  T  *  I  T  *  F  I  L  G  K  L  *  *  K  D  L  *  L  E  W  S  W  L  *  E  C  S  L  F  K  C  *  E  I  E  *  R  L  C  W  L  F  *  C  C  K  *  W  G  V  *  E  A  K  I  C  *  G  *  R  E  K  *  F  L  D  *  *  C  I  G  N  A  G  K  W  W  G  N  *  N  W  I  *  Y  W  W  W  I  W  Y  I  C  C  *  N  G  *  K  E  C  D  Y  S  Y  C  Y  V  E  C  R  C  T  I  *  R  V  H  C  C  T  G  C  I  P  V  V  F  E  F  R  S  S  V  S  L  S  *  *  C  V  *  F  G  T  C  G  K  C  I  G  C  E  R  T  S  *  E  V  R  V  F  S  V  *  Y  *  *  S  F  E  G  W  R  V  V  L  V  G  *  L  S  L  F  K  *  R  Q  E  N  C  I  N  E  A  D  R  T  F  W  V  Q  K  A  *  M  G  C  W  *  E  D  Q  W  V  G  K  I  *  G  L  F  V  C  C  S  T  E  T  S  K  S  L  I  V  S  R  G  F  S  *  K  S  C  A  C  S  L  L  T  *  N  K  *  T  Y  S  S  S  F  T  Q  L  L  T  S  I  I  G  G  R  R  V  R  L  C  G  R  Y  Y  M  S  T  I  S  K  I  I  H  L  S  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84880" stop="83570"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1308</number_coding_nucleotides>
                  <number_encoded_amino_acids>436</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSQHRKSVCFEQKMGSVSLKIGDGTARFKKATYCSSVLNLLMLFSVVTTNLFALYAFTSSPKNPHHHLLLPHTHKNISLISEQVSLILRQIDSSQKKLAQMEKELLGYESFDLSSPKVPNEVRNFLQPHLLPLGKDSRTGITEMVASIGHSCVKSLDLLSQFMSYKVNGLCPDDWSLGQKLILSGCEPLPRRRCFAKTIPKVGLLKLPDSFWGNYSEKIYSWSGLGCKNVACLNVKKLNRDCAGCFDVVSSGGYEKQRYVKGRGKNDFLIDDVLGMLGNGGGIRIGFDIGGGSGTFAVRMAERNVTIVTATLNVDAPFNEFIAARGVFPLYLSLDHRFPFHDNVFDLVHVGNVLDVSGRPEKLEFLVFDIDRVLRAGGLFWLDNFLCSNEDKKTALTRLIERFGYKKLKWVVGEKINGSGKSEVYLSAVLQKPVRV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="85361" PGL_stop="86123"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85361" e_stop="86123"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="85361" e_stop="86123" e_length="763"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85361" stop="86123"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332943" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AACACGTTATCAGCACGAAGTTGCTACTTGCAAAGGTATTATATAAATATTTTTATTTGATTCACATATTCTCTCATAATTTCATTATGTCGAATTTATCCAAACTTGAGTTTGTGGCATTAGATATTTCTGGAAAGAATTATCTTTCATGGGTACTCGATGCTGAGATTCACTTGGCTGCTAAAGGTCTTGATGCCACTATTACTCAGGGAAATGAAGCATCGAGTCAAGATAAGGCGAAAGCTATGATTTTCCTTCGTCATCATCTTGATGAGGGCCTGAAGATTGAATATCTGACGGTGAAAGATCCACTTGAATTGTGGACTGATTTAAAGGGGAGATATGACCACCTAAAGGCAACAGTGTTGCCAAGAGCTCGTTATGAGTGGATGCATTTACGATTTCAAGATTTTAAGACCGTGATTGAATACAACTCTGCTGTATTCAGGATAACCTCCCAGTTGAAATTATGTGGAGAGACTATAAAAGATGAGGACATGTTGGAAAAGACACTTACTACTTTCCATGCCTCAAATGTGATATTGCAGCAGCAATATCGTGAAAAGGGTTTTCAGAAATATTTTGAACTAATCTCATGTCTGTTGGTGGCTGAGCAACATAATGCTCTTTTAATGAAAAATCATGAAGCTCGTCCCACTGGAGCTGCTCCATTACCGGAGGCAAATGTGGTGGAAGCACGTGATCAATCTAAAGTAAAAAGAGATGATCATGGGGGATATAATAATGCACGGGGACGTGGCAA</gDNA_template>
            <first_frame> N  T  L  S  A  R  S  C  Y  L  Q  R  Y  Y  I  N  I  F  I  *  F  T  Y  S  L  I  I  S  L  C  R  I  Y  P  N  L  S  L  W  H  *  I  F  L  E  R  I  I  F  H  G  Y  S  M  L  R  F  T  W  L  L  K  V  L  M  P  L  L  L  R  E  M  K  H  R  V  K  I  R  R  K  L  *  F  S  F  V  I  I  L  M  R  A  *  R  L  N  I  *  R  *  K  I  H  L  N  C  G  L  I  *  R  G  D  M  T  T  *  R  Q  Q  C  C  Q  E  L  V  M  S  G  C  I  Y  D  F  K  I  L  R  P  *  L  N  T  T  L  L  Y  S  G  *  P  P  S  *  N  Y  V  E  R  L  *  K  M  R  T  C  W  K  R  H  L  L  L  S  M  P  Q  M  *  Y  C  S  S  N  I  V  K  R  V  F  R  N  I  L  N  *  S  H  V  C  W  W  L  S  N  I  M  L  F  *  *  K  I  M  K  L  V  P  L  E  L  L  H  Y  R  R  Q  M  W  W  K  H  V  I  N  L  K  *  K  E  M  I  M  G  D  I  I  M  H  G  D  V  A  </first_frame>
            <second_frame>  T  R  Y  Q  H  E  V  A  T  C  K  G  I  I  *  I  F  L  F  D  S  H  I  L  S  *  F  H  Y  V  E  F  I  Q  T  *  V  C  G  I  R  Y  F  W  K  E  L  S  F  M  G  T  R  C  *  D  S  L  G  C  *  R  S  *  C  H  Y  Y  S  G  K  *  S  I  E  S  R  *  G  E  S  Y  D  F  P  S  S  S  S  *  *  G  P  E  D  *  I  S  D  G  E  R  S  T  *  I  V  D  *  F  K  G  E  I  *  P  P  K  G  N  S  V  A  K  S  S  L  *  V  D  A  F  T  I  S  R  F  *  D  R  D  *  I  Q  L  C  C  I  Q  D  N  L  P  V  E  I  M  W  R  D  Y  K  R  *  G  H  V  G  K  D  T  Y  Y  F  P  C  L  K  C  D  I  A  A  A  I  S  *  K  G  F  S  E  I  F  *  T  N  L  M  S  V  G  G  *  A  T  *  C  S  F  N  E  K  S  *  S  S  S  H  W  S  C  S  I  T  G  G  K  C  G  G  S  T  *  S  I  *  S  K  K  R  *  S  W  G  I  *  *  C  T  G  T  W  Q </second_frame>
            <third_frame>   H  V  I  S  T  K  L  L  L  A  K  V  L  Y  K  Y  F  Y  L  I  H  I  F  S  H  N  F  I  M  S  N  L  S  K  L  E  F  V  A  L  D  I  S  G  K  N  Y  L  S  W  V  L  D  A  E  I  H  L  A  A  K  G  L  D  A  T  I  T  Q  G  N  E  A  S  S  Q  D  K  A  K  A  M  I  F  L  R  H  H  L  D  E  G  L  K  I  E  Y  L  T  V  K  D  P  L  E  L  W  T  D  L  K  G  R  Y  D  H  L  K  A  T  V  L  P  R  A  R  Y  E  W  M  H  L  R  F  Q  D  F  K  T  V  I  E  Y  N  S  A  V  F  R  I  T  S  Q  L  K  L  C  G  E  T  I  K  D  E  D  M  L  E  K  T  L  T  T  F  H  A  S  N  V  I  L  Q  Q  Q  Y  R  E  K  G  F  Q  K  Y  F  E  L  I  S  C  L  L  V  A  E  Q  H  N  A  L  L  M  K  N  H  E  A  R  P  T  G  A  A  P  L  P  E  A  N  V  V  E  A  R  D  Q  S  K  V  K  R  D  D  H  G  G  Y  N  N  A  R  G  R  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85363" stop="86121"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>759</number_coding_nucleotides>
                  <number_encoded_amino_acids>253</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HVISTKLLLAKVLYKYFYLIHIFSHNFIMSNLSKLEFVALDISGKNYLSWVLDAEIHLAAKGLDATITQGNEASSQDKAKAMIFLRHHLDEGLKIEYLTVKDPLELWTDLKGRYDHLKATVLPRARYEWMHLRFQDFKTVIEYNSAVFRITSQLKLCGETIKDEDMLEKTLTTFHASNVILQQQYREKGFQKYFELISCLLVAEQHNALLMKNHEARPTGAAPLPEANVVEARDQSKVKRDDHGGYNNARGRG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="86657" PGL_stop="87202"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86657" e_stop="87202"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.905"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.905">
            <gDNA_exon_boundary e_start="86657" e_stop="87202" e_length="546"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86657" stop="87202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339613" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86767" stop="87135"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339612" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATCCCCAGTTGTCAGTTGGATTCAAGATGAGTAATGGAGATGTATGCCTTCTTGATAATGCTACAACGCATACAATATTAAAAGAAAAGAAATACTTTTCTAATTTGGTTATGAAAATGGCATATGTCAACACAATATCAGGTAGTACAAAATTAATTGAGGGCTCTGGAAGAGCGACCTTATTACTACCTGGAGGGACAATATTAAGCATTGATAATGCATTATATTGTAGTAAGTCTCAAAGAAACTTATTAAGTTTCAAAGTTATTCGCCAAAATGGCTATCATGTTGAGACGGCTAATGAAGGAAAGGTTGAATACCTTTACATTACTACAATTAATGTTGAGAAGAAAATTGTGCATGAAAAATTACCTGCATTTTCTTCTGGGTCGTACTATACAAGTATAAGTACAGTTGAATCACATGCCGTAGTAAACAAAAGGTTTACTAATTTTAATGATTTTATCATTTGGCATGACCGGTTGGGCCATCCTGGATTTAATATGATGCGCAAAATCATTGAGAATTCACATGGACACACCTT</gDNA_template>
            <first_frame> K  S  P  V  V  S  W  I  Q  D  E  *  W  R  C  M  P  S  *  *  C  Y  N  A  Y  N  I  K  R  K  E  I  L  F  *  F  G  Y  E  N  G  I  C  Q  H  N  I  R  *  Y  K  I  N  *  G  L  W  K  S  D  L  I  T  T  W  R  D  N  I  K  H  *  *  C  I  I  L  *  *  V  S  K  K  L  I  K  F  Q  S  Y  S  P  K  W  L  S  C  *  D  G  *  *  R  K  G  *  I  P  L  H  Y  Y  N  *  C  *  E  E  N  C  A  *  K  I  T  C  I  F  F  W  V  V  L  Y  K  Y  K  Y  S  *  I  T  C  R  S  K  Q  K  V  Y  *  F  *  *  F  Y  H  L  A  *  P  V  G  P  S  W  I  *  Y  D  A  Q  N  H  *  E  F  T  W  T  H  L </first_frame>
            <second_frame>  N  P  Q  L  S  V  G  F  K  M  S  N  G  D  V  C  L  L  D  N  A  T  T  H  T  I  L  K  E  K  K  Y  F  S  N  L  V  M  K  M  A  Y  V  N  T  I  S  G  S  T  K  L  I  E  G  S  G  R  A  T  L  L  L  P  G  G  T  I  L  S  I  D  N  A  L  Y  C  S  K  S  Q  R  N  L  L  S  F  K  V  I  R  Q  N  G  Y  H  V  E  T  A  N  E  G  K  V  E  Y  L  Y  I  T  T  I  N  V  E  K  K  I  V  H  E  K  L  P  A  F  S  S  G  S  Y  Y  T  S  I  S  T  V  E  S  H  A  V  V  N  K  R  F  T  N  F  N  D  F  I  I  W  H  D  R  L  G  H  P  G  F  N  M  M  R  K  I  I  E  N  S  H  G  H  T   </second_frame>
            <third_frame>   I  P  S  C  Q  L  D  S  R  *  V  M  E  M  Y  A  F  L  I  M  L  Q  R  I  Q  Y  *  K  K  R  N  T  F  L  I  W  L  *  K  W  H  M  S  T  Q  Y  Q  V  V  Q  N  *  L  R  A  L  E  E  R  P  Y  Y  Y  L  E  G  Q  Y  *  A  L  I  M  H  Y  I  V  V  S  L  K  E  T  Y  *  V  S  K  L  F  A  K  M  A  I  M  L  R  R  L  M  K  E  R  L  N  T  F  T  L  L  Q  L  M  L  R  R  K  L  C  M  K  N  Y  L  H  F  L  L  G  R  T  I  Q  V  *  V  Q  L  N  H  M  P  *  *  T  K  G  L  L  I  L  M  I  L  S  F  G  M  T  G  W  A  I  L  D  L  I  *  C  A  K  S  L  R  I  H  M  D  T  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86658" stop="87200"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>543</number_coding_nucleotides>
                  <number_encoded_amino_acids>181</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NPQLSVGFKMSNGDVCLLDNATTHTILKEKKYFSNLVMKMAYVNTISGSTKLIEGSGRATLLLPGGTILSIDNALYCSKSQRNLLSFKVIRQNGYHVETANEGKVEYLYITTINVEKKIVHEKLPAFSSGSYYTSISTVESHAVVNKRFTNFNDFIIWHDRLGHPGFNMMRKIIENSHGHT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="90367" PGL_stop="88513"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90367" e_stop="90325"/>
            <exon e_start="90265" e_stop="88513"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.744"/>
          <exon-only e_score="0.950"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.744">
            <gDNA_exon_boundary e_start="90367" e_stop="90325" e_length="43"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="90324" i_stop="90266" i_length="59"/>
          </intron>
          <exon e_serial="2" e_score="0.950">
            <gDNA_exon_boundary e_start="90265" e_stop="88513" e_length="1753"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90367" stop="90325"/>
              <exon start="90265" stop="88513"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318979" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATCCAATGGATTTATAACACTTCCCCTTGGATGTCCATAG : GAAAAAGAGTACACATATCTCATAATACGCTTTGAATGTTGCCTCATTAAAAACCTTACCAGGAAAACCCAACTTGGGACAAAACCATAGTTAAGGAAAAGAGTACAACGCGTATTTCGCTCCCCCTGATGAAAACTTTACTTGATATCTCGGAGACGGCGCATTCCAATCTTGTATCTCAACTTCTCAAATGTTGATGTTGGCAATGCCTTAGTGAATAAATCAGCAAGATTATCACTTGAACGAATTTGTTGAACTTCTATCTCACCATTTTGTTGAAGATCATGCGTGAAAAAGAACTTTGGTGAGATATGCTTTGTCCGGTCTCCTTTGATGTATCCTCCTTTCAATTGAGCTATACATGCAGCATTATCTTCGTACATTGTGGTTGGTATATTCTTTTTCAAAGAAAAACCACACATTTTCTGAATATGATGGGTCATTCGACTTGCTTCATGGATGGCTATTATTTCTGCATGATTTGAAGAAGTGGCTACCAATGTTTGCTTCATTGATCGCCAAGATATTGCCGTGTCTCCACATGTAAACAAATAGTCTGTTTGTGATCGAGCTTTATGCGGATCTGATAAATACCCTGCATCTGCGTAACCAATCAGTTCTGATTTGGATTCATTGGAATAGAATAAACCCATGTCCATGGTCCCTCGAAGATATCGAAGTATGTGTTTAACACCATTCCAATGTCTTTTTGTTGGGGAGGAACTGAATCTTGCCAGTAGACTTACTGCAAAACAGATATCTGGTCGAGTATTGTTAACAAGGTACATTAGTGCCCCGATCGCACTAAGATAAGGAGTTTCATCACCAAGAAGCTCTTCATCATTCTCTTGAGGTCGAAATGGATCTGTATTGATGTCAAGAGATCTTACCACCATTGGAGTACTCAATGGATGTGAGTTATCCATGTAAAAACGCTTTAGTATCTTTTCTGTGTACGTTGATTGATGAACAAGTATTCCATTTGACAAATTCTCAATCTGTAGACCAAGACAAAATTTTGTCTTCCCGAGATCTTTCATTTCAAATTCTCTTTTCAGACACTCAACAGCTTCTAAAAGCTCTTTACGAGTTCCAATGATGTTCAAATCATCAACATACACAGCTATTATTACAAATTCAGACCCCAACCGTTTAATGAAAATGCAGGGACAAATCGAGTCATTTTTGTACCCTTTCTTTAACAAATATTCACTCAAACGATTGTACCACATCCTTCCTGATTGTTTCAGTCCATACAGAGATTTCTGAAGCTTTATTGAACAAGTTTCTCTTGAATCTTTGTATGTTTCAGGCACTTTAAATGCTTCAGGAATTTTCATGAAAATGTTGTGGTCCAATGAGCCATATAGATAGGCTGTGACAACGTCCATTAGACGCATTTCAAGTTTTTCATAAACTGCCAGATTTATGAGATATCTAAAGGTGATTGCATCTACCACTGGAGAATATGTCTCCATATAATCAATGCCAGGTCTTTGAGAAAAACCTTGAGCAACGAGTCGGGCCTTATATCTCATGACTTCACCTTTCTCATTTCTTTTTCGTACAAAAATCCATTTGTACCCCACTGGCTTGATACCTTCAGGTGTTCGGATTATTGGTCCAAAAACTTCACGTTTTTCTAGTGAAGCCAATTCAGCTTGAATTGCATCCTTCCATTTTGGCCAATCATTTCTCTGTCTACATTCGTGAACAGATTTTGGCTCAAAATCTTCATCTTGTTGCATTATTT</gDNA_template>
            <first_frame> T  I  Q  W  I  Y  N  T  S  P  W  M  S  I   : G  K  R  V  H  I  S  H  N  T  L  *  M  L  P  H  *  K  P  Y  Q  E  N  P  T  W  D  K  T  I  V  K  E  K  S  T  T  R  I  S  L  P  L  M  K  T  L  L  D  I  S  E  T  A  H  S  N  L  V  S  Q  L  L  K  C  *  C  W  Q  C  L  S  E  *  I  S  K  I  I  T  *  T  N  L  L  N  F  Y  L  T  I  L  L  K  I  M  R  E  K  E  L  W  *  D  M  L  C  P  V  S  F  D  V  S  S  F  Q  L  S  Y  T  C  S  I  I  F  V  H  C  G  W  Y  I  L  F  Q  R  K  T  T  H  F  L  N  M  M  G  H  S  T  C  F  M  D  G  Y  Y  F  C  M  I  *  R  S  G  Y  Q  C  L  L  H  *  S  P  R  Y  C  R  V  S  T  C  K  Q  I  V  C  L  *  S  S  F  M  R  I  *  *  I  P  C  I  C  V  T  N  Q  F  *  F  G  F  I  G  I  E  *  T  H  V  H  G  P  S  K  I  S  K  Y  V  F  N  T  I  P  M  S  F  C  W  G  G  T  E  S  C  Q  *  T  Y  C  K  T  D  I  W  S  S  I  V  N  K  V  H  *  C  P  D  R  T  K  I  R  S  F  I  T  K  K  L  F  I  I  L  L  R  S  K  W  I  C  I  D  V  K  R  S  Y  H  H  W  S  T  Q  W  M  *  V  I  H  V  K  T  L  *  Y  L  F  C  V  R  *  L  M  N  K  Y  S  I  *  Q  I  L  N  L  *  T  K  T  K  F  C  L  P  E  I  F  H  F  K  F  S  F  Q  T  L  N  S  F  *  K  L  F  T  S  S  N  D  V  Q  I  I  N  I  H  S  Y  Y  Y  K  F  R  P  Q  P  F  N  E  N  A  G  T  N  R  V  I  F  V  P  F  L  *  Q  I  F  T  Q  T  I  V  P  H  P  S  *  L  F  Q  S  I  Q  R  F  L  K  L  Y  *  T  S  F  S  *  I  F  V  C  F  R  H  F  K  C  F  R  N  F  H  E  N  V  V  V  Q  *  A  I  *  I  G  C  D  N  V  H  *  T  H  F  K  F  F  I  N  C  Q  I  Y  E  I  S  K  G  D  C  I  Y  H  W  R  I  C  L  H  I  I  N  A  R  S  L  R  K  T  L  S  N  E  S  G  L  I  S  H  D  F  T  F  L  I  S  F  S  Y  K  N  P  F  V  P  H  W  L  D  T  F  R  C  S  D  Y  W  S  K  N  F  T  F  F  *  *  S  Q  F  S  L  N  C  I  L  P  F  W  P  I  I  S  L  S  T  F  V  N  R  F  W  L  K  I  F  I  L  L  H  Y   </first_frame>
            <second_frame>  Q  S  N  G  F  I  T  L  P  L  G  C  P  *  :  E  K  E  Y  T  Y  L  I  I  R  F  E  C  C  L  I  K  N  L  T  R  K  T  Q  L  G  T  K  P  *  L  R  K  R  V  Q  R  V  F  R  S  P  *  *  K  L  Y  L  I  S  R  R  R  R  I  P  I  L  Y  L  N  F  S  N  V  D  V  G  N  A  L  V  N  K  S  A  R  L  S  L  E  R  I  C  *  T  S  I  S  P  F  C  *  R  S  C  V  K  K  N  F  G  E  I  C  F  V  R  S  P  L  M  Y  P  P  F  N  *  A  I  H  A  A  L  S  S  Y  I  V  V  G  I  F  F  F  K  E  K  P  H  I  F  *  I  *  W  V  I  R  L  A  S  W  M  A  I  I  S  A  *  F  E  E  V  A  T  N  V  C  F  I  D  R  Q  D  I  A  V  S  P  H  V  N  K  *  S  V  C  D  R  A  L  C  G  S  D  K  Y  P  A  S  A  *  P  I  S  S  D  L  D  S  L  E  *  N  K  P  M  S  M  V  P  R  R  Y  R  S  M  C  L  T  P  F  Q  C  L  F  V  G  E  E  L  N  L  A  S  R  L  T  A  K  Q  I  S  G  R  V  L  L  T  R  Y  I  S  A  P  I  A  L  R  *  G  V  S  S  P  R  S  S  S  S  F  S  *  G  R  N  G  S  V  L  M  S  R  D  L  T  T  I  G  V  L  N  G  C  E  L  S  M  *  K  R  F  S  I  F  S  V  Y  V  D  *  *  T  S  I  P  F  D  K  F  S  I  C  R  P  R  Q  N  F  V  F  P  R  S  F  I  S  N  S  L  F  R  H  S  T  A  S  K  S  S  L  R  V  P  M  M  F  K  S  S  T  Y  T  A  I  I  T  N  S  D  P  N  R  L  M  K  M  Q  G  Q  I  E  S  F  L  Y  P  F  F  N  K  Y  S  L  K  R  L  Y  H  I  L  P  D  C  F  S  P  Y  R  D  F  *  S  F  I  E  Q  V  S  L  E  S  L  Y  V  S  G  T  L  N  A  S  G  I  F  M  K  M  L  W  S  N  E  P  Y  R  *  A  V  T  T  S  I  R  R  I  S  S  F  S  *  T  A  R  F  M  R  Y  L  K  V  I  A  S  T  T  G  E  Y  V  S  I  *  S  M  P  G  L  *  E  K  P  *  A  T  S  R  A  L  Y  L  M  T  S  P  F  S  F  L  F  R  T  K  I  H  L  Y  P  T  G  L  I  P  S  G  V  R  I  I  G  P  K  T  S  R  F  S  S  E  A  N  S  A  *  I  A  S  F  H  F  G  Q  S  F  L  C  L  H  S  *  T  D  F  G  S  K  S  S  S  C  C  I  I  </second_frame>
            <third_frame>   N  P  M  D  L  *  H  F  P  L  D  V  H  R :   K  K  S  T  H  I  S  *  Y  A  L  N  V  A  S  L  K  T  L  P  G  K  P  N  L  G  Q  N  H  S  *  G  K  E  Y  N  A  Y  F  A  P  P  D  E  N  F  T  *  Y  L  G  D  G  A  F  Q  S  C  I  S  T  S  Q  M  L  M  L  A  M  P  *  *  I  N  Q  Q  D  Y  H  L  N  E  F  V  E  L  L  S  H  H  F  V  E  D  H  A  *  K  R  T  L  V  R  Y  A  L  S  G  L  L  *  C  I  L  L  S  I  E  L  Y  M  Q  H  Y  L  R  T  L  W  L  V  Y  S  F  S  K  K  N  H  T  F  S  E  Y  D  G  S  F  D  L  L  H  G  W  L  L  F  L  H  D  L  K  K  W  L  P  M  F  A  S  L  I  A  K  I  L  P  C  L  H  M  *  T  N  S  L  F  V  I  E  L  Y  A  D  L  I  N  T  L  H  L  R  N  Q  S  V  L  I  W  I  H  W  N  R  I  N  P  C  P  W  S  L  E  D  I  E  V  C  V  *  H  H  S  N  V  F  L  L  G  R  N  *  I  L  P  V  D  L  L  Q  N  R  Y  L  V  E  Y  C  *  Q  G  T  L  V  P  R  S  H  *  D  K  E  F  H  H  Q  E  A  L  H  H  S  L  E  V  E  M  D  L  Y  *  C  Q  E  I  L  P  P  L  E  Y  S  M  D  V  S  Y  P  C  K  N  A  L  V  S  F  L  C  T  L  I  D  E  Q  V  F  H  L  T  N  S  Q  S  V  D  Q  D  K  I  L  S  S  R  D  L  S  F  Q  I  L  F  S  D  T  Q  Q  L  L  K  A  L  Y  E  F  Q  *  C  S  N  H  Q  H  T  Q  L  L  L  Q  I  Q  T  P  T  V  *  *  K  C  R  D  K  S  S  H  F  C  T  L  S  L  T  N  I  H  S  N  D  C  T  T  S  F  L  I  V  S  V  H  T  E  I  S  E  A  L  L  N  K  F  L  L  N  L  C  M  F  Q  A  L  *  M  L  Q  E  F  S  *  K  C  C  G  P  M  S  H  I  D  R  L  *  Q  R  P  L  D  A  F  Q  V  F  H  K  L  P  D  L  *  D  I  *  R  *  L  H  L  P  L  E  N  M  S  P  Y  N  Q  C  Q  V  F  E  K  N  L  E  Q  R  V  G  P  Y  I  S  *  L  H  L  S  H  F  F  F  V  Q  K  S  I  C  T  P  L  A  *  Y  L  Q  V  F  G  L  L  V  Q  K  L  H  V  F  L  V  K  P  I  Q  L  E  L  H  P  S  I  L  A  N  H  F  S  V  Y  I  R  E  Q  I  L  A  Q  N  L  H  L  V  A  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89296" stop="88997"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>297</number_coding_nucleotides>
                  <number_encoded_amino_acids>99</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSIPFDKFSICRPRQNFVFPRSFISNSLFRHSTASKSSLRVPMMFKSSTYTAIITNSDPNRLMKMQGQIESFLYPFFNKYSLKRLYHILPDCFSPYRDF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88871" stop="88620"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>THFKFFINCQIYEISKGDCIYHWRICLHIINARSLRKTLSNESGLISHDFTFLISFSYKNPFVPHWLDTFRCSDYWSKNFTFF*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89391" stop="89167"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CQEILPPLEYSMDVSYPCKNALVSFLCTLIDEQVFHLTNSQSVDQDKILSSRDLSFQILFSDTQQLLKALYEFQ*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="4"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89931" stop="89719"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>210</number_coding_nucleotides>
                  <number_encoded_amino_acids>70</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CILLSIELYMQHYLRTLWLVYSFSKKNHTFSEYDGSFDLLHGWLLFLHDLKKWLPMFASLIAKILPCLHM*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="96444" PGL_stop="91265"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96444" e_stop="96247"/>
            <exon e_start="93685" e_stop="93607"/>
            <exon e_start="93528" e_stop="93464"/>
            <exon e_start="93261" e_stop="93162"/>
            <exon e_start="93024" e_stop="92983"/>
            <exon e_start="92876" e_stop="92835"/>
            <exon e_start="92558" e_stop="92359"/>
            <exon e_start="91602" e_stop="91265"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.515" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.541" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="96444" e_stop="96247" e_length="198"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.515">
            <gDNA_intron_boundary i_start="96246" i_stop="93686" i_length="2561"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93685" e_stop="93607" e_length="79"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="93606" i_stop="93529" i_length="78"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="93528" e_stop="93464" e_length="65"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.541">
            <gDNA_intron_boundary i_start="93463" i_stop="93262" i_length="202"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="93261" e_stop="93162" e_length="100"/>
          </exon>
          <intron i_serial="4" don_prob="0.998" acc_prob="0.995">
            <gDNA_intron_boundary i_start="93161" i_stop="93025" i_length="137"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="93024" e_stop="92983" e_length="42"/>
          </exon>
          <intron i_serial="5" don_prob="0.988" acc_prob="0.994">
            <gDNA_intron_boundary i_start="92982" i_stop="92877" i_length="106"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="92876" e_stop="92835" e_length="42"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.986">
            <gDNA_intron_boundary i_start="92834" i_stop="92559" i_length="276"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="92558" e_stop="92359" e_length="200"/>
          </exon>
          <intron i_serial="7" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="92358" i_stop="91603" i_length="756"/>
          </intron>
          <exon e_serial="8" e_score="0.988">
            <gDNA_exon_boundary e_start="91602" e_stop="91265" e_length="338"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96444" stop="96247"/>
              <exon start="93685" stop="93607"/>
              <exon start="93528" stop="93464"/>
              <exon start="93261" stop="93162"/>
              <exon start="93024" stop="92983"/>
              <exon start="92876" stop="92835"/>
              <exon start="92558" stop="92359"/>
              <exon start="91602" stop="91265"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322562" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>NNNNNNNNNNNNNNNAATGGCTAGAGAAAAAATTCAGATCAAGAAAATAGATAACTCCACAGCAAGACAAGTTACATTTTCAAAGAGGAGAAGAGGTTTATTCAAGAAAGCTGAAGAACTTTCTGTTCTCTGTGATGCTGATGTTGCTCTCATCATTTTCTCTTCTACTGGAAAATTATTTGACTATTCTAGCTCAAG : CATGAAACAAATTCTTGAGAGGCGTGATTTGCATTCCAAAAATCTGGAAAAATTGGATCAACCATCACTTGAACTTCAG : CTTGTAGAAAATAGCAACTACTCCAGATTAAGCAAGGAAATTTCCGAAAAAAGTCATCGATTAAG : GCAAATGAGGGGAGAAGAACTTCAAGGACTAAATATTGAAGAGTTGCAACAATTGGAGAGATCTCTTGAAACTGGATTGAGCCGCGTCATAGAGAGAAAG : GGTGATAAAATAATGAGAGAGATCAACCAACTCCAACAAAAG : GGTATGCATCTAATGGAAGAAAATGAAAAATTAAGGCAACAG : GTGATGGAGATATCTAATAATAATAATAATAATAATAATGGATATAGAGAGGCAGGAGTAGTAATATTTGAACCAGAAAATGGATTTAATAATAATAATAATGAAGATGGCCAATCATCTGAATCAGTAACAAATCCATGTAACTCAATTGATCCTCCTCCTCAAGATGATGATAGTTCTGATACTTCTCTCAAATTGGG : GCTACCTTACTCAGGCTGAAGAGATCAAAAGCAAGGTGTGGCTATTTTTGTATGTTATTAGAAGAAGGAGAAAAAAAAAAGTAACTACTAATTATTATAATTAATTAATGTCTGATTAATGTAAAAGCTAACCCCAAAAATTTCATATTATGTATGTAATTGGTGTATTAATCTCATGTATTCGTCTCCCATAGTTTATATAAATATTATTGTTAGTATCTATTAACTTAATTAACTAGCACTAATAATCTTTTATAATTGAACTTTGTGACTTGTAACTATATAAAGGCTTAATTATTTAATTATTTGACTTTTTTCTGTTGCTGTAAATTTAAATA</gDNA_template>
            <first_frame> F  F  F  F  F  N  G  *  R  K  N  S  D  Q  E  N  R  *  L  H  S  K  T  S  Y  I  F  K  E  E  K  R  F  I  Q  E  S  *  R  T  F  C  S  L  *  C  *  C  C  S  H  H  F  L  F  Y  W  K  I  I  *  L  F  *  L  K  :  H  E  T  N  S  *  E  A  *  F  A  F  Q  K  S  G  K  I  G  S  T  I  T  *  T  S   : A  C  R  K  *  Q  L  L  Q  I  K  Q  G  N  F  R  K  K  S  S  I  K  :  A  N  E  G  R  R  T  S  R  T  K  Y  *  R  V  A  T  I  G  E  I  S  *  N  W  I  E  P  R  H  R  E  K   : G  *  *  N  N  E  R  D  Q  P  T  P  T  K   : G  Y  A  S  N  G  R  K  *  K  I  K  A  T   : G  D  G  D  I  *  *  *  *  *  *  *  *  W  I  *  R  G  R  S  S  N  I  *  T  R  K  W  I  *  *  *  *  *  *  R  W  P  I  I  *  I  S  N  K  S  M  *  L  N  *  S  S  S  S  R  *  *  *  F  *  Y  F  S  Q  I  G  :  A  T  L  L  R  L  K  R  S  K  A  R  C  G  Y  F  C  M  L  L  E  E  G  E  K  K  K  *  L  L  I  I  I  I  N  *  C  L  I  N  V  K  A  N  P  K  N  F  I  L  C  M  *  L  V  Y  *  S  H  V  F  V  S  H  S  L  Y  K  Y  Y  C  *  Y  L  L  T  *  L  T  S  T  N  N  L  L  *  L  N  F  V  T  C  N  Y  I  K  A  *  L  F  N  Y  L  T  F  F  C  C  C  K  F  K   </first_frame>
            <second_frame>  F  F  F  F  L  M  A  R  E  K  I  Q  I  K  K  I  D  N  S  T  A  R  Q  V  T  F  S  K  R  R  R  G  L  F  K  K  A  E  E  L  S  V  L  C  D  A  D  V  A  L  I  I  F  S  S  T  G  K  L  F  D  Y  S  S  S  S :   M  K  Q  I  L  E  R  R  D  L  H  S  K  N  L  E  K  L  D  Q  P  S  L  E  L  Q  :  L  V  E  N  S  N  Y  S  R  L  S  K  E  I  S  E  K  S  H  R  L  R :   Q  M  R  G  E  E  L  Q  G  L  N  I  E  E  L  Q  Q  L  E  R  S  L  E  T  G  L  S  R  V  I  E  R  K  :  G  D  K  I  M  R  E  I  N  Q  L  Q  Q  K  :  G  M  H  L  M  E  E  N  E  K  L  R  Q  Q  :  V  M  E  I  S  N  N  N  N  N  N  N  N  G  Y  R  E  A  G  V  V  I  F  E  P  E  N  G  F  N  N  N  N  N  E  D  G  Q  S  S  E  S  V  T  N  P  C  N  S  I  D  P  P  P  Q  D  D  D  S  S  D  T  S  L  K  L  G :   L  P  Y  S  G  *  R  D  Q  K  Q  G  V  A  I  F  V  C  Y  *  K  K  E  K  K  K  S  N  Y  *  L  L  *  L  I  N  V  *  L  M  *  K  L  T  P  K  I  S  Y  Y  V  C  N  W  C  I  N  L  M  Y  S  S  P  I  V  Y  I  N  I  I  V  S  I  Y  *  L  N  *  L  A  L  I  I  F  Y  N  *  T  L  *  L  V  T  I  *  R  L  N  Y  L  I  I  *  L  F  S  V  A  V  N  L  N  </second_frame>
            <third_frame>   F  F  F  F  *  W  L  E  K  K  F  R  S  R  K  *  I  T  P  Q  Q  D  K  L  H  F  Q  R  G  E  E  V  Y  S  R  K  L  K  N  F  L  F  S  V  M  L  M  L  L  S  S  F  S  L  L  L  E  N  Y  L  T  I  L  A  Q   : A  *  N  K  F  L  R  G  V  I  C  I  P  K  I  W  K  N  W  I  N  H  H  L  N  F  S :   L  *  K  I  A  T  T  P  D  *  A  R  K  F  P  K  K  V  I  D  *   : G  K  *  G  E  K  N  F  K  D  *  I  L  K  S  C  N  N  W  R  D  L  L  K  L  D  *  A  A  S  *  R  E  R :   V  I  K  *  *  E  R  S  T  N  S  N  K  R :   V  C  I  *  W  K  K  M  K  N  *  G  N  R :   *  W  R  Y  L  I  I  I  I  I  I  I  M  D  I  E  R  Q  E  *  *  Y  L  N  Q  K  M  D  L  I  I  I  I  M  K  M  A  N  H  L  N  Q  *  Q  I  H  V  T  Q  L  I  L  L  L  K  M  M  I  V  L  I  L  L  S  N  W   : G  Y  L  T  Q  A  E  E  I  K  S  K  V  W  L  F  L  Y  V  I  R  R  R  R  K  K  K  V  T  T  N  Y  Y  N  *  L  M  S  D  *  C  K  S  *  P  Q  K  F  H  I  M  Y  V  I  G  V  L  I  S  C  I  R  L  P  *  F  I  *  I  L  L  L  V  S  I  N  L  I  N  *  H  *  *  S  F  I  I  E  L  C  D  L  *  L  Y  K  G  L  I  I  *  L  F  D  F  F  L  L  L  *  I  *  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0107K14.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="96443" stop="96247"/>
                    <exon start="93685" stop="93607"/>
                    <exon start="93528" stop="93464"/>
                    <exon start="93261" stop="93162"/>
                    <exon start="93024" stop="92983"/>
                    <exon start="92876" stop="92835"/>
                    <exon start="92558" stop="92359"/>
                    <exon start="91602" stop="91584"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FFFFLMAREKIQIKKIDNSTARQVTFSKRRRGLFKKAEELSVLCDADVALIIFSSTGKLFDYSSSSMKQILERRDLHSKNLEKLDQPSLELQLVENSNYSRLSKEISEKSHRLRQMRGEELQGLNIEELQQLERSLETGLSRVIERKGDKIMREINQLQQKGMHLMEENEKLRQQVMEISNNNNNNNNGYREAGVVIFEPENGFNNNNNEDGQSSESVTNPCNSIDPPPQDDDSSDTSLKLGLPYSG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 22 chains have been computed
$ 
$ memory statistics:
$ 190904 bytes spliced alignments in total
$ 19 spliced alignments have been stored
$ 10047 bytes was the average size of a spliced alignment
$ 22112 bytes predicted gene locations in total
$ 14 predicted gene locations have been stored
$ 1579 bytes was the average size of a predicted gene location
$ 2 megabytes was the average size of the backtrace matrix
$ 27 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-07 06:50:02
-->
