<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2008-03-10 20:44:22"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E624190" ref_strand="+" ref_description="SGN-E624190 [GI|7649666]">
      <seq>ggcggccgctctagaactagtggatcccccgggctgcaggaattcaagagaaaaggctccttatttgatatgtgttgaagttttaaaatgtgaaagccccaatttaaaagacacatacaactctcaaaagctatctaagggagggatccctctggcaaatggagatgttctattgccaaagcctcctccttgggcttatcctctttggataggacaggataaccacaatgacagaatgtcaaggtctgcatctcaggccatagaccaagcaatggctcaattatgggatgctaaagtgaaatttgtgcgagtgaatttttcggtagagatgcaatcagagtctgcaatagatcattgcagccttggttctgcttcagaaagttatagtaaatgcagagaggtcccatctcttccattgaagtcagatgctattgattcagaatgggtacgggttgtcttgactgtagatcctggtgttaggatggaggatatagtggaccaagaaccaccaagaaagaaagagcatcgaagggttcccagtacagtagccatcgaggaagttaagttagctgcattaaaaggcgaagcacctcctggactccctttgaaaggtgctggtcaggattcatctgatgcacaacctaaggtcacaaatggtggtcttcccaaggttagtgatgcactttctggagaactctgggaagtcaagaaggaaagaatacgcaaatgctctggttatgggaaattacctgggtgggacttgagatctttcatcgtgaagagtggtgatgattgcagacaggagcatcttgctgtacaacttatctcccacttctacgatatcttccaggaagctggtctaccgctttggttgcgtccttatgaagtcttagttacatcctcttatactgctctaattgaaacaattccagatacggcctcaattcattctatcaaaagtagatttcctaacatcacaagtctacgtgaattttatgttgccaagtatcaggagaattctcctacctttaagcttgctcagagaaatttcgttgaaagcatggctggatattctctggtttgctaccttttgcagataaaggatcgacacaacggaaatcttctattggatgaagaaggacatatcatacacattgactttggtttcatgctatctaattcacctggaggtgtaaattttgaaagtgcaccatttaaattgacacgtgaacttcttgagatcatggattctgatgctgaaggagttccaagcgagttctttgattatttcaaagttctatgcatccaagggtttctcacatgtcggaagcacgcagagcgtataattcttcttgtcgagatgctacaggattccggttacccttgtttcaagggtggtccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagttatccacaccgaaacctgactatacgtgtgaagagaaccgatctttaactagtttgctgagaggggcttggttgggaaagagcaattcattatatggatgtgttcgtctgattcagtcgaggttaaaggattgcttgtccttgcagtttgcttctctttctgaggaatttgtagttgtacctgcgaatgttgtattgaaatgtaccaggtgcaagctctcttcaagaagagctttaatttctagtttcactcaattttcaagattattggacaaatggcatgggttgtctcaagattcagtgaagagatttgtcgagtatacccacccgtgggtacatactgtacagagctgtgtgtaagaaaatgcaacagtggtggctagctgacagaacgcgagagacggctgtttgaattgaatcatgagtttgctggtgcaacatgatatttggtttgtacaatagcttctttgctttaattttgttcttcatttttccttttattgtgtcaaaagcattatttagattagcagtaggaaaattgcagccggctatttcttgattttcaagtctttgattctttgtgttcaccaggagatatctgaaacagcagagttgtaatgtataatattttttgtccaccacacctcttcatagtgaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="17446" stop="2852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17136" g_stop="17074" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="102" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17073" i_stop="16964" i_length="110">
            <donor d_prob="0.396" d_score="1.00"/>
            <acceptor a_prob="0.761" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="16963" g_stop="16501" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="565" r_length="463" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="16500" i_stop="15582" i_length="919">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15581" g_stop="15501" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="566" r_stop="646" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15500" i_stop="15422" i_length="79">
            <donor d_prob="0.575" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="15421" g_stop="15299" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="647" r_stop="769" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="15298" i_stop="13372" i_length="1927">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13371" g_stop="13302" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="770" r_stop="839" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="13301" i_stop="11363" i_length="1939">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.937" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="11362" g_stop="11265" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="840" r_stop="937" r_length="98" r_score="0.980"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="11264" i_stop="11178" i_length="87">
            <donor d_prob="0.615" d_score="0.98"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="11177" g_stop="11073" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="938" r_stop="1042" r_length="105" r_score="0.952"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="11072" i_stop="9565" i_length="1508">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.719" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="9564" g_stop="9511" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1043" r_stop="1096" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="9510" i_stop="7719" i_length="1792">
            <donor d_prob="0.827" d_score="0.98"/>
            <acceptor a_prob="0.762" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="7718" g_stop="7575" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1097" r_stop="1240" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="7574" i_stop="7463" i_length="112">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="7462" g_stop="7409" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="1241" r_stop="1294" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="7408" i_stop="7328" i_length="81">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="7327" g_stop="7253" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="1295" r_stop="1369" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="7252" i_stop="4100" i_length="3153">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="4099" g_stop="4016" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="1370" r_stop="1453" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="12">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="13">
          <gDNA_exon_boundary g_start="3935" g_stop="3156" g_length="780"/>
          <reference_exon_boundary r_type="cDNA" r_start="1454" r_stop="2222" r_length="769" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2224" polyA_stop="2247"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E624190" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>2194</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624190" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17136" e_stop="17074"/>
          <exon e_start="16963" e_stop="16501"/>
          <exon e_start="15581" e_stop="15501"/>
          <exon e_start="15421" e_stop="15299"/>
          <exon e_start="13371" e_stop="13302"/>
          <exon e_start="11362" e_stop="11265"/>
          <exon e_start="11177" e_stop="11073"/>
          <exon e_start="9564" e_stop="9511"/>
          <exon e_start="7718" e_stop="7575"/>
          <exon e_start="7462" e_stop="7409"/>
          <exon e_start="7327" e_stop="7253"/>
          <exon e_start="4099" e_stop="4016"/>
          <exon e_start="3935" e_stop="3156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTCAAGAGAAAAGGCTCCTTATTTGATATGTGTTGAAGTTTTAAAATGTGAAAGCCCCAAGTAAGTTGATAACGTTTATGAACCAAAGATAGACTTACTTTTAACAGGCTTGATTCTGTTTACACTGCCTCATTTTTGTTCTTTCCTTTTCATTTACATGCAAATGACAGTTCAAAAGACACATTAAACTCTCAAAAGCTATCTAAGGGAGGGATCCCTCTGGCAAATGGAGATGTTCTATTGCCAAAGCCTCCTCCTTGGGCTTATCCTCTTTGGACAGGACAGGACAATCACAATGACAGAATGTCAAGGTCTGCATCTCAGGCCATAGACCAAGCAATGGCTCAATTATGGGATACTAAAGTGAAATTTGTGCGAGTGAATTTTTCGGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCTGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAGGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAGGTAACCTTCATCTCTGCTGCATACGTGAACATTCTTTTACTTCATGAGATGCAGTACTGCCTTTTGGATAAGATCAAGTGTATTATCTGATCTTCGTGAATTACGTGAATGTCTTTCTTTAATCGTCTTTTCATTAATTCTTATGGTCTAGCATCTATATGACCAATTGTCCTTCATATCTATGCTTCAAGACATCAAAGATGTATGTCTAAGTCACCGGGACATTTATTTGTTATATCTGGATATGCTGCTGTTTTGAACTATTAGGAGGGGATCAGGTGAACATCCAGTTATCCACCCCCATCAGTTTTGGTAGTAGGATCACACTGCTAAGCAGTTGCATTTTCTTAGAAATCTAAGGTTAGTGGAGAAAGATAATGGATAATATGGTGCTTGTTGGGAGCCATTAGGTAAGGATAAACCACGCCCCCAAAATCACAGAGCTTGAAGTTCTGATCCATCGTTGCAAATTTTTGTTAGTTTTAGTTGCTCCGGTGAGAACTGAAACTGGATTTTTTATGAAATTGAGGAGCTTTTTATGTTGAATTTATTAGTTTAACATTATCTTCTTCTATGCTGTTTTCTAGTGGAGATATTAATGTCACTGAGTGCTGTATGAGCGGATTTTAGGTGTTGATTCACTGTTATTCTTTGTCAAACAAAAGATAGGTCATAATCTTATGTCATGTTAAGCATCTTGTTACTCATTGAGTTTGAGATCTCATGTGATGTCTACTAACTCCCTCGCGGGATTTTCTTTTGAAAGATGATTACCGTTGTTTGTTTGATATTTTCATCTTTTGGGAGAATTGTTGCTCTATAAATATCACCATTCGTGATTATTTTGTTCATGAGTCCTACTTGTTCCTTTGATACTTCTCCATACATGAAGAAATCACAAACATGGTTCTCTTTACAGTTAGCTGCATTAAAAGGAGAAGCACCTCCTGGACTACCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAGGTAGAGACGTTGTCAGATGTTGTTCCTCTTCTTAATAGAACCTATAATTACACGTGCATGATAATCTCATTGAAAACAGGTCACAAATGGTGGTCTTCCCAATGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCTGTGAGTCCCACCATCTAATTTTTGTTGTTGTTTCCTTGATATTTTCTTCGTAATTTTTGATAAGTTAGTATGACATGTCTGCTTGCCTTATGTATAAAGAGAGGTTGATCTTTGGTCAAATTGCTAGCTTCTCTACTTGATGCTCGTAATTGGCTGCCAATGATTAGGACATGCAGACATACACATATAAATCTACTTATAATATATATACATATTCCCTGTTAAAAGAATAGACATAATATAAACATAATGGGTTTCAGCTCCTTCTAGCGATCTTTTCATTGGTAATGTAACTCATTGATATTCAGCTAAACGTATTATATAATTTGAAATAGCTAGGTTGCACCAAAAATAGTGAAGATGTTTATCTATGCTTAATGCTAATTACAGATTCCATTTGCCTCGAAAACTCGTGTTCCTTTCCTTCCAGACTGTCCACCTATTACTGACCATCCAAGTTTTCCCGTCTTTCGCAATCCTTTCAAGTGCTAGCATTGTAATTGCTCCTTTGTTGTCTTTGCCATTGTCCAAGCAACACCCAGAATGTTAAAAAAGAAGATCCAGACCTGGAAGGTGAAAGAGCAATGAAGGAAAAAAATGCTTGCCATCCTCACTTTGTTTCTGACAAAGGCAGCATCTACTGCAGATGTTTATTCCCATTTTTTCTGTAGATTCTTGTGCGTAAGGTTGGCTTCCTTGGCTACCAACCAGGCACATCAGTCAGCTCCCAGTGCTGATCTGTTTCTCTTGATGCAGTTCCAAGGCCAGTTATCAGCAACAGTGGGCTTTGGCTGCTGGTAGCAAGATTTGACAGTAAACATTCCTTTGATATTGGATTTCCACTGTGTAGTATCTGTCCACAAACTGAGAGGGATCTTATGACATTCTGAGAAGCGATGGACATCAGGACATAAGCTGTCCATTTCACAGTCATTGGTATTGTGCCTAGACTTGATGTTTCAGCCTTGTTCAATCCAATAATCTAACTAGAGAGCTTCAGAATTCCGTGCCACAGTGTACAAAGATGGTATTATTCCTTTAGGGGCCACTGGTCTAGCCAGAATCTGCGTTTTCCTGCCATCTCCAAATACTGTTGAGGTCTTGGATTGGAAGGAGTCCCAGTGTGCTCTTATGTCTCCAGATGCCGCATGTATTGTGGTTGCTCCTTAATTGAAGAGTTGCGCAATATTTGGTTACAATAACCTACCTCCATAAAATCCCATCCTCATTGTTAAATCTCCAATGCCATTTATGCTGCAAACTGGTACTTTGAGCTCTCAAGTCTTTGTTACCCAGACTTCCTGTTCTCTTTTCAGTTGCGACGGTTCCTGTTCTACCAAATTGAATGTCTTGTTTTCCTTCTTGCCTTGTCATAGGAATCTCTTTGCTATTATCCAACCTTTTTGCCACCTGAGTCGGCAGAGGAACAAAGACATAATATCAAAGAAGTCCAGTAAGATCTTAGCCTTGCTAAATCATAAAACCTGAAGCATGTTTCGAAGTCCAAAAATACTTGTGCTCCATCTTTATATAATTCCTTCAAGTCAGGTTGAATACACATTTGGATTTTCACTCAGGTGTAAGGGAGAGAACCCACATAATTAGGCTGAGTATTCTTGTCAAACTCCCATGAGAACCTTCAAATTTTCAAGCATTTCTCCCACAAGTTTTTTGTTTTTCCTTGTGCCTTTCTTATCTTTGTTATTTATTCATTCCTTTTGTCACCAGAAAAACAGGGATGAAGTGAGACAAATTTAAGTTGATAATTGATTGTTTAAAGAATTTTGTGAGTCCACAAAGTTTTCTTTATTATCTTTGCTGCTTCCTTTTATTCTGTACTGTCGGGGATGTACAATTGTTTCTCAATATCATATTATGTTTTTCTTTTAATAGCAGCTAACATGCTTAATTTCTGGCGTTCATATAGTTCATCGTGAAGAGTGGTGATGATTGCAGACAAGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACGGTAAGTATCTTGGATTCAAAGATCTTCCATTTTTATGACTTGTGTAATTATTGGCATTCTCTATAGGTTATGTTTTTTGCTATTCTATTTTGCGGTACCTTTTTGTTTTTAGATAGCTTTGGCTTTTTTGCTTCATTTTTTTTGTCTCAACGAACCGAAAGCAACTTTTGGATGAGGGGATATGTAAGGAGGATCTGATATTATATGGTGGGGGTAGGGGTAGGGGAGGGGTGGGGGTAGCTCATTATAAAATGTTCCCCAACCTCGAGTTATTGAATTGAATTTAGTAGAGTTCTAGAACTCTTCCCTTAACATGAACAGTTGTAAATAAGAGAGCATATGGGCCCAGTTGTCATGGGACTCATATCCGCTCAATCTTTTTTCGTGCTACAGCGTTTGGACTTTGGATAGGGGTTTTAACTTGATTTTGTTCATAATGTTATTATGAAGTGTGTTTAGTATCTTATGCCGAATGTTTTTTGTTGTACTTTTTTTTGCATTTGCTCTAAAATATTCAGTACAGAGACCTTAAAATTAGAAGGTTGAAATGCATTTGGATGCAGGATATTTTTGTAAAAAGAAATCAAGTTGATAAAAACTAGAACGCAAGGTAATATAGGTGATGTAGAACAGGACATAATTAATACGGTAATCTAGTAATAGAAAGAACTAATTCATAAAACAAGCGCTGGAAAGGAAATATTCTGAAAAATTTGATGACTACAAACTTTGCCTAGAGAAATGAATGAGGAATTCAAGTAAATCAAATCTTGCCACCACAAATATACAGTACTATATGATGCGTAGTACTGAAACATTTGGTTAGCAGAGCCGTATGTGTGAGTAACATTTGTTCCATAAGCAAGTGATTTTTAAAAGAGGTCAGATTATTTGAGGGCTTATCTAGCTAGGCGGTCTTTTATCATATTGAGGTTTTCTCCATTTTCTTCAAGTAACATGATGATTGCGCACTCAAAGAGTTTCAATCCCCAAAGAAAAAAATTGCTGGATGAGTTCTGCAATCTTTCTGTTTGGTGAGAAAAATTCCCAATACTTGTATTGGTGATAAGTAGTAGATATCCGCATGGAAGAGTTGAGGATGTGCACAAGTTGGTCCAAACACCACCGCTATAAGTAGCCTATTTTGAGTAGATATTCAACCTTGCCTAGAGGCCTCACGGGTTGAATTGGGATTTGGGTTGCAAGTTTTGTTCCTTCAGCAGAGATATATTACTTAATTGGTATTATTCACATAGATAATCATCATGCACATATTTTCTTATCTGGTGTAAAATATGTAAAATAATTGGCTTTATATATCCAACAAGTCTATTTTTACCAAGATTTAGGACTCACATTTATTTTTTTTGAGCTTTTTATTGGTATGAGGCATACAGTGCTCTTTTGTATATTCCTGTCTTTGCAATCTCAGTCTTTCTTTATTTGAAAAATGTTAAAATTACTCTGTAAATACAAAAGCAATGTAGAACTCTTAGTATTCTAGTGAAAATCATATTTAACTCACCTTGAACTAATGTGACAACAGAGTTGTATAAAATAAAGAATAGTATTGGAGCAGTTATACAGATAAAAATGAAACAAGACAATAATAAAATTCAGCAAATGATTTTGGTAAATACTATGGTTATTTGTCAATTACCTTAATTCATTATGGGAGTCATTTGTTCGGTATTTTTACGTCTTTACTAGCTCACAAGACGGCTTTCTTTCCCAAGATACTTCTGAAAAAAAATAGTATTTTCTACCGAAAGAGTGATCTTTTTTTCCCCATCCTCCTGCATTTGTTAGGTCTATAGCTAGGGTTTCATTCCTAGATATGCCAATGTCAGTGAGATCCATGTTTTTACTGTTGACCTTGAATATTGTTTTATGCTCTCAAGTTACTCACTCATATTGTTTGAGTATTTTGAAATGGTAGATATCTTCCAGGAAGCTGGTCTGCCGCTTTGGTTGCGTCCTTATGAAGTCTTAGTTACATCCTCTTATACTGCTTTAATTGAAACAATTCCAGATACGGTAAAGTGTTGCTTTTTTCTTGATAACCTGAGTGTTCTTTATTGGTTGTGAATATTCGTGACATCGGTTTTAATCATTGTTCTGCAGGCCTCAATTCATTCTATTAAAAGTAGATTTCCTCACATCACAAGTCTACGTGAATTTTATGTTGCCAAGTATCTGGAGAATTCTCCAACCTTTAAGCTTGCCCAGGTAAACGTCATAATGAGAAAAGCTTGTAGCCTTTGTGATTTAGTACTGTCTTGAATTTCTTAATGGCGCCTTCGTTTTGTACTTTCCCCCTTTTTATTGGAGTTGATCGTAGTACAGCAACCCACTAAGTGCTTATGTTCTGTGTTGATCTTTTAGATAATTGTCTTCTGTGTCTAATTGAAGCATGATTAGAGCTTGTTGGAAGCCTTACTGAACCAAGGAAAAAGGGAAAAAAATAGTTTTGTAGTGATGGTAGTGTTTGGGCCAGATTGTGCTTCCACCATGTGCCTGCTACCTCCCACTAGCACATGTACCGAGTAAACCTGACCACCAAGGCTGCATATGTAGTTGGCTCTGTTTTGGTTAAAGTGTTTTTTCACCCTACACTAGCCTTTTCTATTGTTGTAGTTGTTCCCACTCTGATGAATCTTTTCTCACACTGTGCCTTATTATATTGGGGAAGGAGGAAATCGTAATAGTCCTTGCTTATCCTCTTTCTTGATCTTCTCCACTTTTATCCTCTTATTTTTTATTAACCCATCACTTTATCCACCTACCGCCCCAGTGCAGTCCTTAGACCTCTCTCCCTTTAATTTCTACCACCTTCCTCTACCATATATATTGGCCTTCTTGCTGACCTTTGTATTGGGCCTCTCCTCCTTCCCCTACCTTGCATTGTCACCCCTCTCATGTAGGAATATTCAGCTATTGCTACTCAATAGCATATGGCACCTACTTTTAGTTTGGGTTGGGACTTGGGTCTAGTGTAGTCATCGTGAGATATCAGATATTGAATTTAATTATGTTTATTACAAAATTAACATTTGTAATTTTGTATATGAGAATTGTGCACATTACTTCAAAGGGCATGCTTTGTTTCTCATTTCTTGTTCTCTGGGAGGCTTATTACTTTCTTTCTTCTCGCTTTAAAATTAATTTGAAGTGCCAGAAGTGTCGAAGTTTGGGGACTCCTGTGCGCTTCACTTAGAAACATAATAAAAGTGTGTATATAATGAGGGAAGCGCTCCTTATCAAGTAGTTGTCCTTTATGTTCCTTGTATTTTGGGTAATAAGTGTATAGAAGAAAATTATGGACTGATGTGCTCTAGTCAACTATGTTGCTCGGACTCTTTCAAAATGTCGACGGGTGCGTGTCAGATCATCCAACAATAGTGTATTTTTGGAGGATGCGACACGGGCCCAGCATCATTTTGTAGCGTCCGAGCAACTTAGCTAGTCAATGACTGCAATTAGTTTTACTAAATTAAGTTGTATCTTTGTTGTTTAGCCTTTCATATTCAAAGGGATTTTTCTCTTGGGAGATAGTTTGGATGATAAGTTAATGCTTCCAACAATTTTAAGTTGCTTCATTGTACAATTCTAGTTGAATAGTTAAGGCTCTCTCTCTTATGGTTTGCTTAGCTCGCATTTCAATTTCCTTTTCGTAATTTTACTTTGGCTAGGGACTTGTAAAATAAAAGACTCATTTTTGTCTTTCGTACATGCAGAGAAATTTTGTTGAAAGCATGGCTGGATATTCTCTGGTTTGCTACCTTTTGCAGGTGAACTGAATGACTTGTCTCTGTATAATTTTATGATTGCATTAAGAAGCATAAAACACAGATCATATATTTCTGTTGTCAGCAGATGCTTCTTTCTCTAATATGTTTCACCAAAATAGATCCATTTTACATGGGCTACATGCTAGCCATATCCTTTCATTATTAATCGGACATCTTAGTCTCTTCTTGTGCCCCAATACCCCATAAAAATTGAAAATAAGAGATGAAAATTGGGAAAAGATGTGTTTGAAAGAAAAATAAAACTAAATGTGGATGCCAGCACTTGTCTTGAAAGTGATTGAATTTTTCTGATGAAGTAACACTTGTATTGATCAAATGAGAAACCTGGTATTCAAGTAGTAAACAAGAAGTTGAGAACCTATTCAAGACTATGATTTTTACATTAAGTCAGAAAGTACCAGACATCTAAGCTAGCAGGGATTACATGGGTGCGCTGAATATTACGAAGAAACATAGACTACCCCCTTCATCTGTATAATAGTAATTTCTACTGCTCTCCTCCCCAAGGCTCTCTTGTTTCCCTCTCTGCACTACCACATTAGTGCAAAGGAGCTACATTCCTTTCTTTGCTTCTTCTCCGTCCCTTGACAGCCTAGCTCAACTAAACAGGTATAGTCCATCATATCTTTGACGACAGCTGTCATCATCTGTAACTTCCATGGTAATTCAAAGATGAAAATGGAACTGCCGATTAGACAATAAAATTTTCCCTTTGCACCGAATGCAATCAATAGAGCTAAAAAGCATTGGGCAATATTTAATTGTAAGGGACGGAATGGAAGAGCTAAAACACAATCAAATAGCAGAAAATGGACAAGCAGGGAGATTATGGCCTTGCAAAGCCAGAAACAGTTAGGTTTCTTCTTCAAGCTGTATATTTGTCACAAAGACTCATCTGTCTCATTTACATTATACTACACCAGACTCTCCATTAAGAATGAGAATGTTTCATGGTAGTATATGTCAGAATGGTGGAAAAAGTGGTGCTGTTGTTATTCAAGGATAAAGAGTATGACATGTCGTGATGTGTAAAGAAATGCTAAATGTTAGTTTTCCATGGGTTGCATGGCCCAAAAGTTTTCCTGATTCCCTAGGAGAAGTCTTTATAGATACTGTCTCTAGTTCAAATTCAATTAATCAACTAATTGTGATTTATGACAATCATAATTGTTGCATGATATTGGTGAGCCTCTGTCAAGAAAGGGATCTCAGATGTTACGAAGGCAAAAGAGAGAATTCACAACCTGAGGCCCATTGTCTTATCCCTCTTAGCATCAGGTGCAGCATGAAGAATTCATATGGTGTGGATATCCATCTTTTAGATTTCCTCAGTTTCCTCTCACATTTGATTAGTCGGAACTAGTTGTTTCTAAGGTTCCTGGATATGGAAATAGATACACATGTAAGGATATCATAATGTAGTCACAAGTCACAATGCAATTATTGTGCTCTTTTTGTTTTAATACATTGTTCACATAGCTATAAAGAAAAGTAATGGCTGTGTGCTATTTGTTGATGTAACTTGTAACATGAGTTTGTGTAGTGAGTTATTTTATACTCCCTTTTGACACACTAACTCAAATGTTCACTTGTTTCTCAGTGTCAAATGTTTGTTGTGTCAAGGGTTCCAGAAATAATTTTGCATGATTGAAATCTGTTTTTTTTTTCTTTGATTTTTCGTAATGTGGCTACTTTGAATCTCTCCAAAATTAACCTTTCCTAGTACAGTAGGTATTGCAATGATGACCAGTCTTTTTGCTTCTGTTGCTAGATAAAGGATCGACACAACGGAAATCTTCTATTGGACGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAGGTATGTGCTGCTGAAAAATCTCATGTCTAACTTTTTAGTTCTACCCATTATTTTATCTTCTGGAGGTGTTTGATACAGTTTCTCAGCATATGTTGTGGTTGATTTGTGCTAGATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAAGTAAAATATTGTTTACTATGTATTTTGTATCTAGACTTCTTTTTGTTTTTTTGTGCTTTAAACCTTTTTTCCTGTCTTCAGGTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAGGTAGATCCTGATATGTAAAACCTTTGTTTCTGATATATGAATCTCACTTACTAATGGATGGTGGAACGGGGACTGGGGGAATTTTGTAAAAGTAGGAAAGGATTAGAAATGTCCTGTAGTTCTGATGCTGCAAACTTCCCATTTTTCAGTATCTTAGACTTCCATATTTGGTAGGCTAAGCCTTTATCAAGGAAGACTTTTTTCCAACTTTACTCTTTTTGGATCTCGAAAATACCACCAAAGATGCACCTATCAAGAAAAAGAAGTGTCAAAGATGCAGTACAAAATTACGTACTGCTCCTCGATATCCCAAATTAAGTATACTGCTTTGACTTGTCACGGTATCAAGAGATGATCTGAAGATGTTAGTTACTTCTTATTTAAGGGGGTATGTGTTGGGAGCATCACTTTTGTCTTCTTCTGAGGGTGTATGTGCTGGAGAAAGATGGCAAGTTCAACGTGAAATCAGCCTATAAATTACTAGACATTTCAACTGAAACCAAAGATATGTGGCCTTGGAAGATGATCTGGAAAGTGAAGATACCACATAAGGTGGCTTGCTTCACATGGCTTGTTGCAAGACAATGTGTTCCGACTCAGGATAACTTAATGAAAAGAGGAAAGGACTTATGCTCCAGATGTTCTTTTTGTGAATCTGAGACAGAGACAATAAACCATCTTTTTTTGCATTGTAAATGACTGAGAAACTATGGAACTATTTCATTAACATGAGAGGTATCACATGGACCATGCCTAGAAATACTGCATAAGTCCTAGCATGTTGGAATAGAGATGGAAATAGGACACAAGGAGAGATGGAAGATTGTCGCTGCCTGCATCTGGTGGACAATATGGAGTGAGAGAAATCAGAGATGTTTTGAGAACAAGAGCATCCCTTTCCAAAGCATTAAAATGAATTGTTTAGTGACCTTTTAGAGCCTGTTTGGCTCAGCTTAAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAACTGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAAACTTATTTTAAGCCAAAAGTTAAAAGCTGGGGTAGGGGTGCTTTTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTCCAAATTACCCATAAAACCCTAACATCTCTTTCTTCTATTTTTCCCTTTTCACGTTTGGCATAACAACTTCAGCACTTCTATCCAAACGCATAACTGCTTATTTTAAAAATAAGTTTCAACACTTTCAAAAGTACTTTTTTAAAGCTGCTTTTATTAAGCCCATCCAAACGGGCTCTTAGTCTTTTACTTTTGGTGTATCTATTTATTTCCTAGGATCCGGGGGACATCACCCTATTCTTAGATAATTTATGAGGGAGATGCGTGTTTAGATTCTTTTTGGTAAATCCTCTATACTTTTGATGGAATTACCACAGGAGTTCACTATTGGTATACTTATCTGTTTATAATACCAGTTAACTTTCTCAAAAATAAATAAATAAAGATCTTATAACTGTCATAAACAGAATCAAGAAGCTACCATTTGTGTCTCATAAAATTGGCAATAGAGGAGAAACAGTTAAATCTCATATTCATTTTCTATTTTCTACCCATAGAGAATTTATACTGATTGAGTTAATCTATTAGGAGAAGACCAAGGGTTTACAACAAAGAATGTATATCCTTGGGAAAATTGATTGAAATTTACTGGGAAGGAAGAAGGATCTCCATATAGTATTCATTAACTTAGAGAAAGCATATGATGGAGTGCAGAGATGCCTTTTGATGGTGCTTGAAAAGAAAGAAATCCATTCAACTGTAGTATAGGATATGTATGAGGGATTATTCACAAGTGTGACAACAGAGAGAGGAGATTTAGAGGCAGTTCATGTAACTGTTGTTTTAGATGAAGGATCTGCCTAAACTTGTGCTTGTTCAAATGGTTTTGAATGGGCTAACCAATAGTATTTAGGGTGATGTTCATGGCATTCTATTTGCAGAAAAAAGTATGTTCTATATAAACTCTGCAAGTGTACTTACAATTATAAGAAAACGGCGAAGTCATATTTGATGAGATTTTGGTGTCAAAACAGGGAATAATCATATATCTAGATTAGTCATCCAGAAGAAGCTTGTCATAAACAAAATAAGATGGTTGAATTGGGGGAGTGTCATAATAGGCTAAGTGAACTTGATGTCAAACTAAGTGGAAGGCAAGTTGTATGGAACGGTAGAACGGTACTATGAAGTAACCCGAGCATCTAAACCTTTTAAAACTTGTTCAGTACCATTATAAGCTCCATTTAAAACCTTGCACAGCCGGTGACAGACAAGGAATATTTTAAAATCCTGAGTTACCTATTTTTTAAAAAAGGGGATACTTTAAAATCCTCTTGGGTGTGTAACTCGCTTGTGTTTACAAATGGGTTGAGGAGGTTCCCTTTCAGTTCATTTCATCTCATCTTTTTCTTAACCTCTTCTTTATTTTTTTTACTCGTGAAGTATCAGAAAGGAACACAAATTTAATCCAAAGTTAAACAGAATGATCTATCATAAGAGAAAGCAAAATCATCACAAAGAATCTCAGAATCTCTTAAGCATCATACATCCACAAGTGAGATTAATAGTTTGTTTAGCCAAACTTCTAAGAAGCCAGAAGCTTATTATTTAAAAAGTGCTTACTTTAGAGTTGAACAGGCTATATATAGAATGAAAGAAGAAACTCTATGATATATCTTGCATGTCTTAATGAATCTCTAGCTTCTTCCCAATTTTTGTTTCCAGGATTAGTACTGGAAATGATAGTTTGAAAGTTGTTTGTGAAGGTTGGATGAGCGATAGTCTAAGGGCTCTTCTGAGATGAGCTATTTTCTTGTTTACCATCTGGGCACGGTCATGTTGTTTCCCTTGATTGGCATGGGCCATGTTGTTTCCCTGGATTGGCTTACACAACTTGTATTCCTGTTCTCAATCCTATTTAGCTCGACTGTTGTATATGTGATTGAGTTACTAAGCATACTTGTTCTGTCAAACACGTTTTCGTCTTTATTGAATATATACATTGATCTCCTAATAACACAGAATTTGTTTCACTTTGATCTTTATATCAGGATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAA-GGCATGGGTTG--TC----TTCAGTGAAGAGATTTGTCGAGTACACCCACCCACCCCGTGGGTACATACTGTACAGAGC--TGTGTAAGAGATTGCAACAGTGGTGGCTTGCTGCCAGAACGCGAGAGACAGACAGACGGCTGTTGGTACCGTTTGAATTGAATCATGAGTATGCTGGTGCAACATGATATTTGGTTTGTACAATAGCTTATTTGCTTTGATTTTGTTTTTCATTTTCCCTTTTATTGTGTCAAAGGCATTATTTAGATTAGCAGTAGGAAAATTGCAGCCTGC----TCTTAATTTTCAAGTCTTTGATTCTTTGTGTTCACCAGGAGAT-TCTGAAACAGCAGAGTTGTAATGTATAATATTTTTTGTCCACCACACCTCTTCATAGT</genome_strand>
        <mrna_strand>GAATTCAAGAGAAAAGGCTCCTTATTTGATATGTGTTGAAGTTTTAAAATGTGAAAGCCCCAA..............................................................................................................TTTAAAAGACACATACAACTCTCAAAAGCTATCTAAGGGAGGGATCCCTCTGGCAAATGGAGATGTTCTATTGCCAAAGCCTCCTCCTTGGGCTTATCCTCTTTGGATAGGACAGGATAACCACAATGACAGAATGTCAAGGTCTGCATCTCAGGCCATAGACCAAGCAATGGCTCAATTATGGGATGCTAAAGTGAAATTTGTGCGAGTGAATTTTTCGGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCAGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAAGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTGCATTAAAAGGCGAAGCACCTCCTGGACTCCCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAG...............................................................................GTCACAAATGGTGGTCTTCCCAAGGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATCGTGAAGAGTGGTGATGATTGCAGACAGGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTTCCAGGAAGCTGGTCTACCGCTTTGGTTGCGTCCTTATGAAGTCTTAGTTACATCCTCTTATACTGCTCTAATTGAAACAATTCCAGATACG.......................................................................................GCCTCAATTCATTCTATCAAAAGTAGATTTCCTAACATCACAAGTCTACGTGAATTTTATGTTGCCAAGTATCAGGAGAATTCTCCTACCTTTAAGCTTGCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTTCGTTGAAAGCATGGCTGGATATTCTCTGGTTTGCTACCTTTTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGGATCGACACAACGGAAATCTTCTATTGGATGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAG................................................................................................................ATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAA.................................................................................GTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCCGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAG-TTATCCACACCGAAACCTGACTATACGTGTGAAGAG-AACCGATCTTTAACTAGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCATTATATGGATGTGTTCGTCTGATTCAGTCGAGGTTAAAGGATTGCTTGTCC-TTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATGTACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAATGGCATGGGTTGTCTCAAGATTCAGTGAAGAGATTTGTCGAGT--A--TACCCA-CCCGTGGGTACATACTGTACAGAGCTGTGTGTAAGAAAATGCAACAGTGGTGGCTAGCTGACAGAACGC----G--AG--AGACGGC------T---GTTTGAATTGAATCATGAGTTTGCTGGTGCAACATGATATTTGGTTTGTACAATAGCTTCTTTGCTTTAATTTTGTTCTTCATTTTTCCTTTTATTGTGTCAAAAGCATTATTTAGATTAGCAGTAGGAAAATTGCAGCCGGCTATTTCTTGATTTTCAAGTCTTTGATTCTTTGTGTTCACCAGGAGATATCTGAAACAGCAGAGTTGTAATGTATAATATTTTTTGTCCACCACACCTCTTCATAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E624561" ref_strand="+" ref_description="SGN-E624561 [GI|3366929]">
      <seq>ttgaagtcagatgctattgattcagaatgggtacgggttgtcttgactgtagatcctggtgttaggatggaggatatagtggaccaagaaccaccaagaaagaaagagcatcgaagggttcccagtacagtagccatcgaggaagttaagttagctgcattaaaaggcgaagcacctcctggactccctttgaaaggtgctggtcaggattcatctgatgcacaacctaaggtcacaaatggtggtcttcccaaggttagtgatgcactttctggagaactctgggaagtcaagaaggaaagaatacgcaaatgctctggttatgggaaattacctgggtgggacttgagatctttcatcgtgaagagtggtgatgattgcagacaggagcatcttgctgtacaacttatctcccacttctacgatatcttccaggaagctggtctaccgctttggttgcgtccttatgaagtcttagttacatcctcttatactgctctaattgaaacaattccagatacggcctcaattcattctatcaaaagtagatttcctaacatcacaagtctacgtgaattttatgttgccaagtatcaggagaattctcctacctttaagcttgctcagagaaatttcgttgaaagcatggctggatattctctggtttgctaccttttgcagataaaggatcgacacaacggaaatcttctattggatgaagaaggacatatcatacacattgactttggtttcatgctatctaattcacctggaggtgtaaattttgaaagtgcaccatttaaattgacacgtgaacttcttgagatcatggattctgatgctgaaggagttccaagcgagttctttgattatttcaaagttctatgcatccaagggtttctcacatgtcggaagcacgcagagcgtataattcttcttgtcgagatgctacaggattccggttacccttgtttcaagggtggtccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagttatccacaccgaaacctgactatacgtgtgaagagaaccgatctttaactagtttgctgagaggggcttggttgggaaagagcaattcattatatggatgtgttcgtctgattcagtcgaggttaaaggattgcttgtccttgcagtttgcttctctttctgaggaatttgtagttgtacctgcgaatgttgtattgaaatgtaccaggtgcaagctctcttcaagaagagctttaatttctagtttcactcaattttcaagattattggacaaatggcatgggttgtctcaagattcagtgaagagatttgtcgagtatacccacccgtgggtacatactgtacagagctgtgtgtaagaaaatgcaacagtggtggctagctgacagaacgcgagagacggctgtttgaattgaatcatgagtttgctggtgcaacatgatatttggtttgtacaatagcttctttgctttaattttgttcttcatttttccttttattgtgtcaaaagcattatttagattagcagtaggaaaattgcagccggctatttcttgattttcaagtctttgattctttgtgttcaccaggagatatctgaaacagcagagttgtaatgtataatattttttgtccaccacacctcttcatagtgaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="16950" stop="2852"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16650" g_stop="16501" g_length="150"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="150" r_length="150" r_score="0.987"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16500" i_stop="15582" i_length="919">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15581" g_stop="15501" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="231" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15500" i_stop="15422" i_length="79">
            <donor d_prob="0.575" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15421" g_stop="15299" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="232" r_stop="354" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15298" i_stop="13372" i_length="1927">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13371" g_stop="13302" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="355" r_stop="424" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13301" i_stop="11363" i_length="1939">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.937" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11362" g_stop="11265" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="425" r_stop="522" r_length="98" r_score="0.980"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="11264" i_stop="11178" i_length="87">
            <donor d_prob="0.615" d_score="0.98"/>
            <acceptor a_prob="0.980" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="11177" g_stop="11073" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="523" r_stop="627" r_length="105" r_score="0.952"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="11072" i_stop="9565" i_length="1508">
            <donor d_prob="0.985" d_score="0.94"/>
            <acceptor a_prob="0.719" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="9564" g_stop="9511" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="681" r_length="54" r_score="0.981"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="9510" i_stop="7719" i_length="1792">
            <donor d_prob="0.827" d_score="0.98"/>
            <acceptor a_prob="0.762" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="7718" g_stop="7575" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="682" r_stop="825" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="7574" i_stop="7463" i_length="112">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="7462" g_stop="7409" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="826" r_stop="879" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="7408" i_stop="7328" i_length="81">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="7327" g_stop="7253" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="880" r_stop="954" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="7252" i_stop="4100" i_length="3153">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="4099" g_stop="4016" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="955" r_stop="1038" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="11">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="12">
          <gDNA_exon_boundary g_start="3935" g_stop="3156" g_length="780"/>
          <reference_exon_boundary r_type="cDNA" r_start="1039" r_stop="1807" r_length="769" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1809" polyA_stop="1832"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E624561" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>1818</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E624561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16650" e_stop="16501"/>
          <exon e_start="15581" e_stop="15501"/>
          <exon e_start="15421" e_stop="15299"/>
          <exon e_start="13371" e_stop="13302"/>
          <exon e_start="11362" e_stop="11265"/>
          <exon e_start="11177" e_stop="11073"/>
          <exon e_start="9564" e_stop="9511"/>
          <exon e_start="7718" e_stop="7575"/>
          <exon e_start="7462" e_stop="7409"/>
          <exon e_start="7327" e_stop="7253"/>
          <exon e_start="4099" e_stop="4016"/>
          <exon e_start="3935" e_stop="3156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAAGTCTGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAGGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAGGTAACCTTCATCTCTGCTGCATACGTGAACATTCTTTTACTTCATGAGATGCAGTACTGCCTTTTGGATAAGATCAAGTGTATTATCTGATCTTCGTGAATTACGTGAATGTCTTTCTTTAATCGTCTTTTCATTAATTCTTATGGTCTAGCATCTATATGACCAATTGTCCTTCATATCTATGCTTCAAGACATCAAAGATGTATGTCTAAGTCACCGGGACATTTATTTGTTATATCTGGATATGCTGCTGTTTTGAACTATTAGGAGGGGATCAGGTGAACATCCAGTTATCCACCCCCATCAGTTTTGGTAGTAGGATCACACTGCTAAGCAGTTGCATTTTCTTAGAAATCTAAGGTTAGTGGAGAAAGATAATGGATAATATGGTGCTTGTTGGGAGCCATTAGGTAAGGATAAACCACGCCCCCAAAATCACAGAGCTTGAAGTTCTGATCCATCGTTGCAAATTTTTGTTAGTTTTAGTTGCTCCGGTGAGAACTGAAACTGGATTTTTTATGAAATTGAGGAGCTTTTTATGTTGAATTTATTAGTTTAACATTATCTTCTTCTATGCTGTTTTCTAGTGGAGATATTAATGTCACTGAGTGCTGTATGAGCGGATTTTAGGTGTTGATTCACTGTTATTCTTTGTCAAACAAAAGATAGGTCATAATCTTATGTCATGTTAAGCATCTTGTTACTCATTGAGTTTGAGATCTCATGTGATGTCTACTAACTCCCTCGCGGGATTTTCTTTTGAAAGATGATTACCGTTGTTTGTTTGATATTTTCATCTTTTGGGAGAATTGTTGCTCTATAAATATCACCATTCGTGATTATTTTGTTCATGAGTCCTACTTGTTCCTTTGATACTTCTCCATACATGAAGAAATCACAAACATGGTTCTCTTTACAGTTAGCTGCATTAAAAGGAGAAGCACCTCCTGGACTACCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAGGTAGAGACGTTGTCAGATGTTGTTCCTCTTCTTAATAGAACCTATAATTACACGTGCATGATAATCTCATTGAAAACAGGTCACAAATGGTGGTCTTCCCAATGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCTGTGAGTCCCACCATCTAATTTTTGTTGTTGTTTCCTTGATATTTTCTTCGTAATTTTTGATAAGTTAGTATGACATGTCTGCTTGCCTTATGTATAAAGAGAGGTTGATCTTTGGTCAAATTGCTAGCTTCTCTACTTGATGCTCGTAATTGGCTGCCAATGATTAGGACATGCAGACATACACATATAAATCTACTTATAATATATATACATATTCCCTGTTAAAAGAATAGACATAATATAAACATAATGGGTTTCAGCTCCTTCTAGCGATCTTTTCATTGGTAATGTAACTCATTGATATTCAGCTAAACGTATTATATAATTTGAAATAGCTAGGTTGCACCAAAAATAGTGAAGATGTTTATCTATGCTTAATGCTAATTACAGATTCCATTTGCCTCGAAAACTCGTGTTCCTTTCCTTCCAGACTGTCCACCTATTACTGACCATCCAAGTTTTCCCGTCTTTCGCAATCCTTTCAAGTGCTAGCATTGTAATTGCTCCTTTGTTGTCTTTGCCATTGTCCAAGCAACACCCAGAATGTTAAAAAAGAAGATCCAGACCTGGAAGGTGAAAGAGCAATGAAGGAAAAAAATGCTTGCCATCCTCACTTTGTTTCTGACAAAGGCAGCATCTACTGCAGATGTTTATTCCCATTTTTTCTGTAGATTCTTGTGCGTAAGGTTGGCTTCCTTGGCTACCAACCAGGCACATCAGTCAGCTCCCAGTGCTGATCTGTTTCTCTTGATGCAGTTCCAAGGCCAGTTATCAGCAACAGTGGGCTTTGGCTGCTGGTAGCAAGATTTGACAGTAAACATTCCTTTGATATTGGATTTCCACTGTGTAGTATCTGTCCACAAACTGAGAGGGATCTTATGACATTCTGAGAAGCGATGGACATCAGGACATAAGCTGTCCATTTCACAGTCATTGGTATTGTGCCTAGACTTGATGTTTCAGCCTTGTTCAATCCAATAATCTAACTAGAGAGCTTCAGAATTCCGTGCCACAGTGTACAAAGATGGTATTATTCCTTTAGGGGCCACTGGTCTAGCCAGAATCTGCGTTTTCCTGCCATCTCCAAATACTGTTGAGGTCTTGGATTGGAAGGAGTCCCAGTGTGCTCTTATGTCTCCAGATGCCGCATGTATTGTGGTTGCTCCTTAATTGAAGAGTTGCGCAATATTTGGTTACAATAACCTACCTCCATAAAATCCCATCCTCATTGTTAAATCTCCAATGCCATTTATGCTGCAAACTGGTACTTTGAGCTCTCAAGTCTTTGTTACCCAGACTTCCTGTTCTCTTTTCAGTTGCGACGGTTCCTGTTCTACCAAATTGAATGTCTTGTTTTCCTTCTTGCCTTGTCATAGGAATCTCTTTGCTATTATCCAACCTTTTTGCCACCTGAGTCGGCAGAGGAACAAAGACATAATATCAAAGAAGTCCAGTAAGATCTTAGCCTTGCTAAATCATAAAACCTGAAGCATGTTTCGAAGTCCAAAAATACTTGTGCTCCATCTTTATATAATTCCTTCAAGTCAGGTTGAATACACATTTGGATTTTCACTCAGGTGTAAGGGAGAGAACCCACATAATTAGGCTGAGTATTCTTGTCAAACTCCCATGAGAACCTTCAAATTTTCAAGCATTTCTCCCACAAGTTTTTTGTTTTTCCTTGTGCCTTTCTTATCTTTGTTATTTATTCATTCCTTTTGTCACCAGAAAAACAGGGATGAAGTGAGACAAATTTAAGTTGATAATTGATTGTTTAAAGAATTTTGTGAGTCCACAAAGTTTTCTTTATTATCTTTGCTGCTTCCTTTTATTCTGTACTGTCGGGGATGTACAATTGTTTCTCAATATCATATTATGTTTTTCTTTTAATAGCAGCTAACATGCTTAATTTCTGGCGTTCATATAGTTCATCGTGAAGAGTGGTGATGATTGCAGACAAGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACGGTAAGTATCTTGGATTCAAAGATCTTCCATTTTTATGACTTGTGTAATTATTGGCATTCTCTATAGGTTATGTTTTTTGCTATTCTATTTTGCGGTACCTTTTTGTTTTTAGATAGCTTTGGCTTTTTTGCTTCATTTTTTTTGTCTCAACGAACCGAAAGCAACTTTTGGATGAGGGGATATGTAAGGAGGATCTGATATTATATGGTGGGGGTAGGGGTAGGGGAGGGGTGGGGGTAGCTCATTATAAAATGTTCCCCAACCTCGAGTTATTGAATTGAATTTAGTAGAGTTCTAGAACTCTTCCCTTAACATGAACAGTTGTAAATAAGAGAGCATATGGGCCCAGTTGTCATGGGACTCATATCCGCTCAATCTTTTTTCGTGCTACAGCGTTTGGACTTTGGATAGGGGTTTTAACTTGATTTTGTTCATAATGTTATTATGAAGTGTGTTTAGTATCTTATGCCGAATGTTTTTTGTTGTACTTTTTTTTGCATTTGCTCTAAAATATTCAGTACAGAGACCTTAAAATTAGAAGGTTGAAATGCATTTGGATGCAGGATATTTTTGTAAAAAGAAATCAAGTTGATAAAAACTAGAACGCAAGGTAATATAGGTGATGTAGAACAGGACATAATTAATACGGTAATCTAGTAATAGAAAGAACTAATTCATAAAACAAGCGCTGGAAAGGAAATATTCTGAAAAATTTGATGACTACAAACTTTGCCTAGAGAAATGAATGAGGAATTCAAGTAAATCAAATCTTGCCACCACAAATATACAGTACTATATGATGCGTAGTACTGAAACATTTGGTTAGCAGAGCCGTATGTGTGAGTAACATTTGTTCCATAAGCAAGTGATTTTTAAAAGAGGTCAGATTATTTGAGGGCTTATCTAGCTAGGCGGTCTTTTATCATATTGAGGTTTTCTCCATTTTCTTCAAGTAACATGATGATTGCGCACTCAAAGAGTTTCAATCCCCAAAGAAAAAAATTGCTGGATGAGTTCTGCAATCTTTCTGTTTGGTGAGAAAAATTCCCAATACTTGTATTGGTGATAAGTAGTAGATATCCGCATGGAAGAGTTGAGGATGTGCACAAGTTGGTCCAAACACCACCGCTATAAGTAGCCTATTTTGAGTAGATATTCAACCTTGCCTAGAGGCCTCACGGGTTGAATTGGGATTTGGGTTGCAAGTTTTGTTCCTTCAGCAGAGATATATTACTTAATTGGTATTATTCACATAGATAATCATCATGCACATATTTTCTTATCTGGTGTAAAATATGTAAAATAATTGGCTTTATATATCCAACAAGTCTATTTTTACCAAGATTTAGGACTCACATTTATTTTTTTTGAGCTTTTTATTGGTATGAGGCATACAGTGCTCTTTTGTATATTCCTGTCTTTGCAATCTCAGTCTTTCTTTATTTGAAAAATGTTAAAATTACTCTGTAAATACAAAAGCAATGTAGAACTCTTAGTATTCTAGTGAAAATCATATTTAACTCACCTTGAACTAATGTGACAACAGAGTTGTATAAAATAAAGAATAGTATTGGAGCAGTTATACAGATAAAAATGAAACAAGACAATAATAAAATTCAGCAAATGATTTTGGTAAATACTATGGTTATTTGTCAATTACCTTAATTCATTATGGGAGTCATTTGTTCGGTATTTTTACGTCTTTACTAGCTCACAAGACGGCTTTCTTTCCCAAGATACTTCTGAAAAAAAATAGTATTTTCTACCGAAAGAGTGATCTTTTTTTCCCCATCCTCCTGCATTTGTTAGGTCTATAGCTAGGGTTTCATTCCTAGATATGCCAATGTCAGTGAGATCCATGTTTTTACTGTTGACCTTGAATATTGTTTTATGCTCTCAAGTTACTCACTCATATTGTTTGAGTATTTTGAAATGGTAGATATCTTCCAGGAAGCTGGTCTGCCGCTTTGGTTGCGTCCTTATGAAGTCTTAGTTACATCCTCTTATACTGCTTTAATTGAAACAATTCCAGATACGGTAAAGTGTTGCTTTTTTCTTGATAACCTGAGTGTTCTTTATTGGTTGTGAATATTCGTGACATCGGTTTTAATCATTGTTCTGCAGGCCTCAATTCATTCTATTAAAAGTAGATTTCCTCACATCACAAGTCTACGTGAATTTTATGTTGCCAAGTATCTGGAGAATTCTCCAACCTTTAAGCTTGCCCAGGTAAACGTCATAATGAGAAAAGCTTGTAGCCTTTGTGATTTAGTACTGTCTTGAATTTCTTAATGGCGCCTTCGTTTTGTACTTTCCCCCTTTTTATTGGAGTTGATCGTAGTACAGCAACCCACTAAGTGCTTATGTTCTGTGTTGATCTTTTAGATAATTGTCTTCTGTGTCTAATTGAAGCATGATTAGAGCTTGTTGGAAGCCTTACTGAACCAAGGAAAAAGGGAAAAAAATAGTTTTGTAGTGATGGTAGTGTTTGGGCCAGATTGTGCTTCCACCATGTGCCTGCTACCTCCCACTAGCACATGTACCGAGTAAACCTGACCACCAAGGCTGCATATGTAGTTGGCTCTGTTTTGGTTAAAGTGTTTTTTCACCCTACACTAGCCTTTTCTATTGTTGTAGTTGTTCCCACTCTGATGAATCTTTTCTCACACTGTGCCTTATTATATTGGGGAAGGAGGAAATCGTAATAGTCCTTGCTTATCCTCTTTCTTGATCTTCTCCACTTTTATCCTCTTATTTTTTATTAACCCATCACTTTATCCACCTACCGCCCCAGTGCAGTCCTTAGACCTCTCTCCCTTTAATTTCTACCACCTTCCTCTACCATATATATTGGCCTTCTTGCTGACCTTTGTATTGGGCCTCTCCTCCTTCCCCTACCTTGCATTGTCACCCCTCTCATGTAGGAATATTCAGCTATTGCTACTCAATAGCATATGGCACCTACTTTTAGTTTGGGTTGGGACTTGGGTCTAGTGTAGTCATCGTGAGATATCAGATATTGAATTTAATTATGTTTATTACAAAATTAACATTTGTAATTTTGTATATGAGAATTGTGCACATTACTTCAAAGGGCATGCTTTGTTTCTCATTTCTTGTTCTCTGGGAGGCTTATTACTTTCTTTCTTCTCGCTTTAAAATTAATTTGAAGTGCCAGAAGTGTCGAAGTTTGGGGACTCCTGTGCGCTTCACTTAGAAACATAATAAAAGTGTGTATATAATGAGGGAAGCGCTCCTTATCAAGTAGTTGTCCTTTATGTTCCTTGTATTTTGGGTAATAAGTGTATAGAAGAAAATTATGGACTGATGTGCTCTAGTCAACTATGTTGCTCGGACTCTTTCAAAATGTCGACGGGTGCGTGTCAGATCATCCAACAATAGTGTATTTTTGGAGGATGCGACACGGGCCCAGCATCATTTTGTAGCGTCCGAGCAACTTAGCTAGTCAATGACTGCAATTAGTTTTACTAAATTAAGTTGTATCTTTGTTGTTTAGCCTTTCATATTCAAAGGGATTTTTCTCTTGGGAGATAGTTTGGATGATAAGTTAATGCTTCCAACAATTTTAAGTTGCTTCATTGTACAATTCTAGTTGAATAGTTAAGGCTCTCTCTCTTATGGTTTGCTTAGCTCGCATTTCAATTTCCTTTTCGTAATTTTACTTTGGCTAGGGACTTGTAAAATAAAAGACTCATTTTTGTCTTTCGTACATGCAGAGAAATTTTGTTGAAAGCATGGCTGGATATTCTCTGGTTTGCTACCTTTTGCAGGTGAACTGAATGACTTGTCTCTGTATAATTTTATGATTGCATTAAGAAGCATAAAACACAGATCATATATTTCTGTTGTCAGCAGATGCTTCTTTCTCTAATATGTTTCACCAAAATAGATCCATTTTACATGGGCTACATGCTAGCCATATCCTTTCATTATTAATCGGACATCTTAGTCTCTTCTTGTGCCCCAATACCCCATAAAAATTGAAAATAAGAGATGAAAATTGGGAAAAGATGTGTTTGAAAGAAAAATAAAACTAAATGTGGATGCCAGCACTTGTCTTGAAAGTGATTGAATTTTTCTGATGAAGTAACACTTGTATTGATCAAATGAGAAACCTGGTATTCAAGTAGTAAACAAGAAGTTGAGAACCTATTCAAGACTATGATTTTTACATTAAGTCAGAAAGTACCAGACATCTAAGCTAGCAGGGATTACATGGGTGCGCTGAATATTACGAAGAAACATAGACTACCCCCTTCATCTGTATAATAGTAATTTCTACTGCTCTCCTCCCCAAGGCTCTCTTGTTTCCCTCTCTGCACTACCACATTAGTGCAAAGGAGCTACATTCCTTTCTTTGCTTCTTCTCCGTCCCTTGACAGCCTAGCTCAACTAAACAGGTATAGTCCATCATATCTTTGACGACAGCTGTCATCATCTGTAACTTCCATGGTAATTCAAAGATGAAAATGGAACTGCCGATTAGACAATAAAATTTTCCCTTTGCACCGAATGCAATCAATAGAGCTAAAAAGCATTGGGCAATATTTAATTGTAAGGGACGGAATGGAAGAGCTAAAACACAATCAAATAGCAGAAAATGGACAAGCAGGGAGATTATGGCCTTGCAAAGCCAGAAACAGTTAGGTTTCTTCTTCAAGCTGTATATTTGTCACAAAGACTCATCTGTCTCATTTACATTATACTACACCAGACTCTCCATTAAGAATGAGAATGTTTCATGGTAGTATATGTCAGAATGGTGGAAAAAGTGGTGCTGTTGTTATTCAAGGATAAAGAGTATGACATGTCGTGATGTGTAAAGAAATGCTAAATGTTAGTTTTCCATGGGTTGCATGGCCCAAAAGTTTTCCTGATTCCCTAGGAGAAGTCTTTATAGATACTGTCTCTAGTTCAAATTCAATTAATCAACTAATTGTGATTTATGACAATCATAATTGTTGCATGATATTGGTGAGCCTCTGTCAAGAAAGGGATCTCAGATGTTACGAAGGCAAAAGAGAGAATTCACAACCTGAGGCCCATTGTCTTATCCCTCTTAGCATCAGGTGCAGCATGAAGAATTCATATGGTGTGGATATCCATCTTTTAGATTTCCTCAGTTTCCTCTCACATTTGATTAGTCGGAACTAGTTGTTTCTAAGGTTCCTGGATATGGAAATAGATACACATGTAAGGATATCATAATGTAGTCACAAGTCACAATGCAATTATTGTGCTCTTTTTGTTTTAATACATTGTTCACATAGCTATAAAGAAAAGTAATGGCTGTGTGCTATTTGTTGATGTAACTTGTAACATGAGTTTGTGTAGTGAGTTATTTTATACTCCCTTTTGACACACTAACTCAAATGTTCACTTGTTTCTCAGTGTCAAATGTTTGTTGTGTCAAGGGTTCCAGAAATAATTTTGCATGATTGAAATCTGTTTTTTTTTTCTTTGATTTTTCGTAATGTGGCTACTTTGAATCTCTCCAAAATTAACCTTTCCTAGTACAGTAGGTATTGCAATGATGACCAGTCTTTTTGCTTCTGTTGCTAGATAAAGGATCGACACAACGGAAATCTTCTATTGGACGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAGGTATGTGCTGCTGAAAAATCTCATGTCTAACTTTTTAGTTCTACCCATTATTTTATCTTCTGGAGGTGTTTGATACAGTTTCTCAGCATATGTTGTGGTTGATTTGTGCTAGATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAAGTAAAATATTGTTTACTATGTATTTTGTATCTAGACTTCTTTTTGTTTTTTTGTGCTTTAAACCTTTTTTCCTGTCTTCAGGTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAGGTAGATCCTGATATGTAAAACCTTTGTTTCTGATATATGAATCTCACTTACTAATGGATGGTGGAACGGGGACTGGGGGAATTTTGTAAAAGTAGGAAAGGATTAGAAATGTCCTGTAGTTCTGATGCTGCAAACTTCCCATTTTTCAGTATCTTAGACTTCCATATTTGGTAGGCTAAGCCTTTATCAAGGAAGACTTTTTTCCAACTTTACTCTTTTTGGATCTCGAAAATACCACCAAAGATGCACCTATCAAGAAAAAGAAGTGTCAAAGATGCAGTACAAAATTACGTACTGCTCCTCGATATCCCAAATTAAGTATACTGCTTTGACTTGTCACGGTATCAAGAGATGATCTGAAGATGTTAGTTACTTCTTATTTAAGGGGGTATGTGTTGGGAGCATCACTTTTGTCTTCTTCTGAGGGTGTATGTGCTGGAGAAAGATGGCAAGTTCAACGTGAAATCAGCCTATAAATTACTAGACATTTCAACTGAAACCAAAGATATGTGGCCTTGGAAGATGATCTGGAAAGTGAAGATACCACATAAGGTGGCTTGCTTCACATGGCTTGTTGCAAGACAATGTGTTCCGACTCAGGATAACTTAATGAAAAGAGGAAAGGACTTATGCTCCAGATGTTCTTTTTGTGAATCTGAGACAGAGACAATAAACCATCTTTTTTTGCATTGTAAATGACTGAGAAACTATGGAACTATTTCATTAACATGAGAGGTATCACATGGACCATGCCTAGAAATACTGCATAAGTCCTAGCATGTTGGAATAGAGATGGAAATAGGACACAAGGAGAGATGGAAGATTGTCGCTGCCTGCATCTGGTGGACAATATGGAGTGAGAGAAATCAGAGATGTTTTGAGAACAAGAGCATCCCTTTCCAAAGCATTAAAATGAATTGTTTAGTGACCTTTTAGAGCCTGTTTGGCTCAGCTTAAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAACTGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAAACTTATTTTAAGCCAAAAGTTAAAAGCTGGGGTAGGGGTGCTTTTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTCCAAATTACCCATAAAACCCTAACATCTCTTTCTTCTATTTTTCCCTTTTCACGTTTGGCATAACAACTTCAGCACTTCTATCCAAACGCATAACTGCTTATTTTAAAAATAAGTTTCAACACTTTCAAAAGTACTTTTTTAAAGCTGCTTTTATTAAGCCCATCCAAACGGGCTCTTAGTCTTTTACTTTTGGTGTATCTATTTATTTCCTAGGATCCGGGGGACATCACCCTATTCTTAGATAATTTATGAGGGAGATGCGTGTTTAGATTCTTTTTGGTAAATCCTCTATACTTTTGATGGAATTACCACAGGAGTTCACTATTGGTATACTTATCTGTTTATAATACCAGTTAACTTTCTCAAAAATAAATAAATAAAGATCTTATAACTGTCATAAACAGAATCAAGAAGCTACCATTTGTGTCTCATAAAATTGGCAATAGAGGAGAAACAGTTAAATCTCATATTCATTTTCTATTTTCTACCCATAGAGAATTTATACTGATTGAGTTAATCTATTAGGAGAAGACCAAGGGTTTACAACAAAGAATGTATATCCTTGGGAAAATTGATTGAAATTTACTGGGAAGGAAGAAGGATCTCCATATAGTATTCATTAACTTAGAGAAAGCATATGATGGAGTGCAGAGATGCCTTTTGATGGTGCTTGAAAAGAAAGAAATCCATTCAACTGTAGTATAGGATATGTATGAGGGATTATTCACAAGTGTGACAACAGAGAGAGGAGATTTAGAGGCAGTTCATGTAACTGTTGTTTTAGATGAAGGATCTGCCTAAACTTGTGCTTGTTCAAATGGTTTTGAATGGGCTAACCAATAGTATTTAGGGTGATGTTCATGGCATTCTATTTGCAGAAAAAAGTATGTTCTATATAAACTCTGCAAGTGTACTTACAATTATAAGAAAACGGCGAAGTCATATTTGATGAGATTTTGGTGTCAAAACAGGGAATAATCATATATCTAGATTAGTCATCCAGAAGAAGCTTGTCATAAACAAAATAAGATGGTTGAATTGGGGGAGTGTCATAATAGGCTAAGTGAACTTGATGTCAAACTAAGTGGAAGGCAAGTTGTATGGAACGGTAGAACGGTACTATGAAGTAACCCGAGCATCTAAACCTTTTAAAACTTGTTCAGTACCATTATAAGCTCCATTTAAAACCTTGCACAGCCGGTGACAGACAAGGAATATTTTAAAATCCTGAGTTACCTATTTTTTAAAAAAGGGGATACTTTAAAATCCTCTTGGGTGTGTAACTCGCTTGTGTTTACAAATGGGTTGAGGAGGTTCCCTTTCAGTTCATTTCATCTCATCTTTTTCTTAACCTCTTCTTTATTTTTTTTACTCGTGAAGTATCAGAAAGGAACACAAATTTAATCCAAAGTTAAACAGAATGATCTATCATAAGAGAAAGCAAAATCATCACAAAGAATCTCAGAATCTCTTAAGCATCATACATCCACAAGTGAGATTAATAGTTTGTTTAGCCAAACTTCTAAGAAGCCAGAAGCTTATTATTTAAAAAGTGCTTACTTTAGAGTTGAACAGGCTATATATAGAATGAAAGAAGAAACTCTATGATATATCTTGCATGTCTTAATGAATCTCTAGCTTCTTCCCAATTTTTGTTTCCAGGATTAGTACTGGAAATGATAGTTTGAAAGTTGTTTGTGAAGGTTGGATGAGCGATAGTCTAAGGGCTCTTCTGAGATGAGCTATTTTCTTGTTTACCATCTGGGCACGGTCATGTTGTTTCCCTTGATTGGCATGGGCCATGTTGTTTCCCTGGATTGGCTTACACAACTTGTATTCCTGTTCTCAATCCTATTTAGCTCGACTGTTGTATATGTGATTGAGTTACTAAGCATACTTGTTCTGTCAAACACGTTTTCGTCTTTATTGAATATATACATTGATCTCCTAATAACACAGAATTTGTTTCACTTTGATCTTTATATCAGGATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAA-GGCATGGGTTG--TC----TTCAGTGAAGAGATTTGTCGAGTACACCCACCCACCCCGTGGGTACATACTGTACAGAGC--TGTGTAAGAGATTGCAACAGTGGTGGCTTGCTGCCAGAACGCGAGAGACAGACAGACGGCTGTTGGTACCGTTTGAATTGAATCATGAGTATGCTGGTGCAACATGATATTTGGTTTGTACAATAGCTTATTTGCTTTGATTTTGTTTTTCATTTTCCCTTTTATTGTGTCAAAGGCATTATTTAGATTAGCAGTAGGAAAATTGCAGCCTGC----TCTTAATTTTCAAGTCTTTGATTCTTTGTGTTCACCAGGAGAT-TCTGAAACAGCAGAGTTGTAATGTATAATATTTTTTGTCCACCACACCTCTTCATAGT</genome_strand>
        <mrna_strand>TTGAAGTCAGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAAGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTGCATTAAAAGGCGAAGCACCTCCTGGACTCCCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAG...............................................................................GTCACAAATGGTGGTCTTCCCAAGGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATCGTGAAGAGTGGTGATGATTGCAGACAGGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTTCCAGGAAGCTGGTCTACCGCTTTGGTTGCGTCCTTATGAAGTCTTAGTTACATCCTCTTATACTGCTCTAATTGAAACAATTCCAGATACG.......................................................................................GCCTCAATTCATTCTATCAAAAGTAGATTTCCTAACATCACAAGTCTACGTGAATTTTATGTTGCCAAGTATCAGGAGAATTCTCCTACCTTTAAGCTTGCTCAG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAAATTTCGTTGAAAGCATGGCTGGATATTCTCTGGTTTGCTACCTTTTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGGATCGACACAACGGAAATCTTCTATTGGATGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAG................................................................................................................ATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAA.................................................................................GTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCCGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAG-TTATCCACACCGAAACCTGACTATACGTGTGAAGAG-AACCGATCTTTAACTAGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCATTATATGGATGTGTTCGTCTGATTCAGTCGAGGTTAAAGGATTGCTTGTCC-TTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATGTACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAATGGCATGGGTTGTCTCAAGATTCAGTGAAGAGATTTGTCGAGT--A--TACCCA-CCCGTGGGTACATACTGTACAGAGCTGTGTGTAAGAAAATGCAACAGTGGTGGCTAGCTGACAGAACGC----G--AG--AGACGGC------T---GTTTGAATTGAATCATGAGTTTGCTGGTGCAACATGATATTTGGTTTGTACAATAGCTTCTTTGCTTTAATTTTGTTCTTCATTTTTCCTTTTATTGTGTCAAAAGCATTATTTAGATTAGCAGTAGGAAAATTGCAGCCGGCTATTTCTTGATTTTCAAGTCTTTGATTCTTTGTGTTCACCAGGAGATATCTGAAACAGCAGAGTTGTAATGTATAATATTTTTTGTCCACCACACCTCTTCATAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E540504" ref_strand="-" ref_description="SGN-E540504 [TUS-60-N2]">
      <seq>ttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagtttatccacaccgaaacgtgattatacatgtgaagagaaaccgatctttaacttgtttgctgagaggggcttggttgggaaagagcaattcactatatgaacgtgttcttctgattctgtcgaggttaaaggattgcttgtcctttgcagtttgcttctctttctgaggaatttgtagttgtacctgcgaatgttgtattgaaatataccaggtgcaagctctcttcaagaagagctttaatttctagtttcactcaattttcaagattattggacaaaggcatgggttgtcttcagtgaagagatttgtcgagtacacccacccacccgtgggtacatactgtacagagctgtgtaagagattgcaacagtggtggcttgctgccagaacgcgagagacagacagacggctgttggtaccgtttgaattgaatcatgagtttgctggtgcaacatgatatttggtttgtacaatagcttatttgctttgattttgtttttcattttcccttttattgtgtcaaaggcattatttagattagcagtaggaaaattgcagcctgctcttaattttcaagtctttgattctttgtgttcaccaggagattctgaaacagcagagttgtaatgtataatatttttttccaccaaaaaaaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="4237" stop="2868"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4027" g_stop="4016" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3935" g_stop="3178" g_length="758"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="769" r_length="757" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="776" polyA_stop="799"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E540504" ref_strand="-">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>770</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E540504" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="4027" e_stop="4016"/>
          <exon e_start="3935" e_stop="3178"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAAGGCATGGGTTGTCTTCAGTGAAGAGATTTGTCGAGTACACCCACCCACCCCGTGGGTACATACTGTACAGAGCTGTGTAAGAGATTGCAACAGTGGTGGCTTGCTGCCAGAACGCGAGAGACAGACAGACGGCTGTTGGTACCGTTTGAATTGAATCATGAGTATGCTGGTGCAACATGATATTTGGTTTGTACAATAGCTTATTTGCTTTGATTTTGTTTTTCATTTTCCCTTTTATTGTGTCAAAGGCATTATTTAGATTAGCAGTAGGAAAATTGCAGCCTGCTCTTAATTTTCAAGTCTTTGATTCTTTGTGTTCACCAGGAGATTCTGAAACAGCAGAGTTGTAATGTATAATATTTTTT</genome_strand>
        <mrna_strand>TTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAAGGCATGGGTTGTCTTCAGTGAAGAGATTTGTCGAGTACACCCACCCA-CCCGTGGGTACATACTGTACAGAGCTGTGTAAGAGATTGCAACAGTGGTGGCTTGCTGCCAGAACGCGAGAGACAGACAGACGGCTGTTGGTACCGTTTGAATTGAATCATGAGTTTGCTGGTGCAACATGATATTTGGTTTGTACAATAGCTTATTTGCTTTGATTTTGTTTTTCATTTTCCCTTTTATTGTGTCAAAGGCATTATTTAGATTAGCAGTAGGAAAATTGCAGCCTGCTCTTAATTTTCAAGTCTTTGATTCTTTGTGTTCACCAGGAGATTCTGAAACAGCAGAGTTGTAATGTATAATATTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E244539" ref_strand="+" ref_description="SGN-E244539 [cLED-38-E12]">
      <seq>ttgtttcatgggtggtccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagtttatccacaccgaaacgtgattatacatgtgaagagaaaccgatctttaacttgtttgctgagaggggcttggttgggaaagagcaattcactatatgaacgtgttcttctgattctgtcgaggttaaaggattgcttgtcctttgcagattgcttctctttctgaggaatttgtagttgtacctgcgaatgttgtattgaaatataccaggtgcaagctctcttgaagaagagctttaatttctagtttcactcaattttcaagattattggacaaaggcatgggttgtcttcagtgaagagatttgtcgagtacacccacccaccccggggtacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="4385" stop="3179"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4085" g_stop="4016" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3935" g_stop="3479" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="526" r_length="456" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E244539" ref_strand="+">
        <total_alignment_score>0.992</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244539" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4085" e_stop="4016"/>
          <exon e_start="3935" e_stop="3479"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAAGGCATGGGTTGTCTTCAGTGAAGAGATTTGTCGAGTACACCCACCCACCCCGTGGGTACATACT</genome_strand>
        <mrna_strand>TTGTTTCATGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGATTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTGAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAAGGCATGGGTTGTCTTCAGTGAAGAGATTTGTCGAGTACACCCACCCACCCCG-GGGTACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E244546" ref_strand="+" ref_description="SGN-E244546 [cLED-38-K10]">
      <seq>ttgtttcaagggtggtccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagtttatccacaccgaaacgtgattatacatgtgaagagaaaccgatctttaacttgtttgctgagaggggcttggttgggaaagagcaattcactatatgaacgtgttcttctgattctgtcgaggttaaaggattgcttgtcctttgcagtttgcttctctttctgaggaatttgtagttgtacctgcgaatgttgtattgaaatataccaggtgcaagctctcttcaagaagagctttaatttctagtttcactcaattttcaagattattggacaaaggcatgggttgtcttcagtgaagagatttgtcnagtacacccacccacccgtgggtacatact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="4385" stop="3179"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4085" g_stop="4016" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="70" r_length="70" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3935" g_stop="3479" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="71" r_stop="526" r_length="456" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E244546" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>527</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E244546" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4085" e_stop="4016"/>
          <exon e_start="3935" e_stop="3479"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAAGGCATGGGTTGTCTTCAGTGAAGAGATTTGTCGAGTACACCCACCCACCCCGTGGGTACATACT</genome_strand>
        <mrna_strand>TTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAAGGCATGGGTTGTCTTCAGTGAAGAGATTTGTCNAGTACACCCACCCA-CCCGTGGGTACATACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E576934" ref_strand="+" ref_description="SGN-E576934 [31327]">
      <seq>atttcgttgaaagcatggctggatattctctggtttgctaccttttgcagataaaggatcgacacaacggaaatcttctattggatgaagaaggacatatcatacacattgactttggtttcatgctatctaattcacctggaggtgtaaattttgaaagtgcaccatttaaattgacacgtgaacttcttgagatcatggattctgatgctgaaggagttccaagcgagttctttgattatttcaaagttctatgcatccaagggtttctcacatgtcggaagcacgcagagcgtataattcttcttgtcgagatgctacaggattctggttacccttgtttcaagggtggcccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagttatccacaccgaaacctgactatacgtgtgaagagaaccgatctttaactagtttgctgagaggggcttggttgggaaagagcaattcattatatggatgtgttcgtctgattcagtcgaggttaaaggattgcttgtccttgcagtttgcttctctttctgaggaatttgtagtgtacctgcgaatgttgtattgaaatgtacccaggtgcaagctctcttcaagaagagctttaatttctagtttcactccaattntcaagattattggagaaaaggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="9860" stop="3240"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9560" g_stop="9511" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9510" i_stop="7719" i_length="1792">
            <donor d_prob="0.827" d_score="0.98"/>
            <acceptor a_prob="0.762" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7718" g_stop="7575" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="194" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7574" i_stop="7463" i_length="112">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7462" g_stop="7409" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="248" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7408" i_stop="7328" i_length="81">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7327" g_stop="7253" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="323" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7252" i_stop="4100" i_length="3153">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4099" g_stop="4016" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="324" r_stop="407" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3935" g_stop="3540" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="802" r_length="395" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E576934" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>803</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E576934" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9560" e_stop="9511"/>
          <exon e_start="7718" e_stop="7575"/>
          <exon e_start="7462" e_stop="7409"/>
          <exon e_start="7327" e_stop="7253"/>
          <exon e_start="4099" e_stop="4016"/>
          <exon e_start="3935" e_stop="3540"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTGTTGAAAGCATGGCTGGATATTCTCTGGTTTGCTACCTTTTGCAGGTGAACTGAATGACTTGTCTCTGTATAATTTTATGATTGCATTAAGAAGCATAAAACACAGATCATATATTTCTGTTGTCAGCAGATGCTTCTTTCTCTAATATGTTTCACCAAAATAGATCCATTTTACATGGGCTACATGCTAGCCATATCCTTTCATTATTAATCGGACATCTTAGTCTCTTCTTGTGCCCCAATACCCCATAAAAATTGAAAATAAGAGATGAAAATTGGGAAAAGATGTGTTTGAAAGAAAAATAAAACTAAATGTGGATGCCAGCACTTGTCTTGAAAGTGATTGAATTTTTCTGATGAAGTAACACTTGTATTGATCAAATGAGAAACCTGGTATTCAAGTAGTAAACAAGAAGTTGAGAACCTATTCAAGACTATGATTTTTACATTAAGTCAGAAAGTACCAGACATCTAAGCTAGCAGGGATTACATGGGTGCGCTGAATATTACGAAGAAACATAGACTACCCCCTTCATCTGTATAATAGTAATTTCTACTGCTCTCCTCCCCAAGGCTCTCTTGTTTCCCTCTCTGCACTACCACATTAGTGCAAAGGAGCTACATTCCTTTCTTTGCTTCTTCTCCGTCCCTTGACAGCCTAGCTCAACTAAACAGGTATAGTCCATCATATCTTTGACGACAGCTGTCATCATCTGTAACTTCCATGGTAATTCAAAGATGAAAATGGAACTGCCGATTAGACAATAAAATTTTCCCTTTGCACCGAATGCAATCAATAGAGCTAAAAAGCATTGGGCAATATTTAATTGTAAGGGACGGAATGGAAGAGCTAAAACACAATCAAATAGCAGAAAATGGACAAGCAGGGAGATTATGGCCTTGCAAAGCCAGAAACAGTTAGGTTTCTTCTTCAAGCTGTATATTTGTCACAAAGACTCATCTGTCTCATTTACATTATACTACACCAGACTCTCCATTAAGAATGAGAATGTTTCATGGTAGTATATGTCAGAATGGTGGAAAAAGTGGTGCTGTTGTTATTCAAGGATAAAGAGTATGACATGTCGTGATGTGTAAAGAAATGCTAAATGTTAGTTTTCCATGGGTTGCATGGCCCAAAAGTTTTCCTGATTCCCTAGGAGAAGTCTTTATAGATACTGTCTCTAGTTCAAATTCAATTAATCAACTAATTGTGATTTATGACAATCATAATTGTTGCATGATATTGGTGAGCCTCTGTCAAGAAAGGGATCTCAGATGTTACGAAGGCAAAAGAGAGAATTCACAACCTGAGGCCCATTGTCTTATCCCTCTTAGCATCAGGTGCAGCATGAAGAATTCATATGGTGTGGATATCCATCTTTTAGATTTCCTCAGTTTCCTCTCACATTTGATTAGTCGGAACTAGTTGTTTCTAAGGTTCCTGGATATGGAAATAGATACACATGTAAGGATATCATAATGTAGTCACAAGTCACAATGCAATTATTGTGCTCTTTTTGTTTTAATACATTGTTCACATAGCTATAAAGAAAAGTAATGGCTGTGTGCTATTTGTTGATGTAACTTGTAACATGAGTTTGTGTAGTGAGTTATTTTATACTCCCTTTTGACACACTAACTCAAATGTTCACTTGTTTCTCAGTGTCAAATGTTTGTTGTGTCAAGGGTTCCAGAAATAATTTTGCATGATTGAAATCTGTTTTTTTTTTCTTTGATTTTTCGTAATGTGGCTACTTTGAATCTCTCCAAAATTAACCTTTCCTAGTACAGTAGGTATTGCAATGATGACCAGTCTTTTTGCTTCTGTTGCTAGATAAAGGATCGACACAACGGAAATCTTCTATTGGACGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAGGTATGTGCTGCTGAAAAATCTCATGTCTAACTTTTTAGTTCTACCCATTATTTTATCTTCTGGAGGTGTTTGATACAGTTTCTCAGCATATGTTGTGGTTGATTTGTGCTAGATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAAGTAAAATATTGTTTACTATGTATTTTGTATCTAGACTTCTTTTTGTTTTTTTGTGCTTTAAACCTTTTTTCCTGTCTTCAGGTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAGGTAGATCCTGATATGTAAAACCTTTGTTTCTGATATATGAATCTCACTTACTAATGGATGGTGGAACGGGGACTGGGGGAATTTTGTAAAAGTAGGAAAGGATTAGAAATGTCCTGTAGTTCTGATGCTGCAAACTTCCCATTTTTCAGTATCTTAGACTTCCATATTTGGTAGGCTAAGCCTTTATCAAGGAAGACTTTTTTCCAACTTTACTCTTTTTGGATCTCGAAAATACCACCAAAGATGCACCTATCAAGAAAAAGAAGTGTCAAAGATGCAGTACAAAATTACGTACTGCTCCTCGATATCCCAAATTAAGTATACTGCTTTGACTTGTCACGGTATCAAGAGATGATCTGAAGATGTTAGTTACTTCTTATTTAAGGGGGTATGTGTTGGGAGCATCACTTTTGTCTTCTTCTGAGGGTGTATGTGCTGGAGAAAGATGGCAAGTTCAACGTGAAATCAGCCTATAAATTACTAGACATTTCAACTGAAACCAAAGATATGTGGCCTTGGAAGATGATCTGGAAAGTGAAGATACCACATAAGGTGGCTTGCTTCACATGGCTTGTTGCAAGACAATGTGTTCCGACTCAGGATAACTTAATGAAAAGAGGAAAGGACTTATGCTCCAGATGTTCTTTTTGTGAATCTGAGACAGAGACAATAAACCATCTTTTTTTGCATTGTAAATGACTGAGAAACTATGGAACTATTTCATTAACATGAGAGGTATCACATGGACCATGCCTAGAAATACTGCATAAGTCCTAGCATGTTGGAATAGAGATGGAAATAGGACACAAGGAGAGATGGAAGATTGTCGCTGCCTGCATCTGGTGGACAATATGGAGTGAGAGAAATCAGAGATGTTTTGAGAACAAGAGCATCCCTTTCCAAAGCATTAAAATGAATTGTTTAGTGACCTTTTAGAGCCTGTTTGGCTCAGCTTAAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAACTGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAAACTTATTTTAAGCCAAAAGTTAAAAGCTGGGGTAGGGGTGCTTTTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTCCAAATTACCCATAAAACCCTAACATCTCTTTCTTCTATTTTTCCCTTTTCACGTTTGGCATAACAACTTCAGCACTTCTATCCAAACGCATAACTGCTTATTTTAAAAATAAGTTTCAACACTTTCAAAAGTACTTTTTTAAAGCTGCTTTTATTAAGCCCATCCAAACGGGCTCTTAGTCTTTTACTTTTGGTGTATCTATTTATTTCCTAGGATCCGGGGGACATCACCCTATTCTTAGATAATTTATGAGGGAGATGCGTGTTTAGATTCTTTTTGGTAAATCCTCTATACTTTTGATGGAATTACCACAGGAGTTCACTATTGGTATACTTATCTGTTTATAATACCAGTTAACTTTCTCAAAAATAAATAAATAAAGATCTTATAACTGTCATAAACAGAATCAAGAAGCTACCATTTGTGTCTCATAAAATTGGCAATAGAGGAGAAACAGTTAAATCTCATATTCATTTTCTATTTTCTACCCATAGAGAATTTATACTGATTGAGTTAATCTATTAGGAGAAGACCAAGGGTTTACAACAAAGAATGTATATCCTTGGGAAAATTGATTGAAATTTACTGGGAAGGAAGAAGGATCTCCATATAGTATTCATTAACTTAGAGAAAGCATATGATGGAGTGCAGAGATGCCTTTTGATGGTGCTTGAAAAGAAAGAAATCCATTCAACTGTAGTATAGGATATGTATGAGGGATTATTCACAAGTGTGACAACAGAGAGAGGAGATTTAGAGGCAGTTCATGTAACTGTTGTTTTAGATGAAGGATCTGCCTAAACTTGTGCTTGTTCAAATGGTTTTGAATGGGCTAACCAATAGTATTTAGGGTGATGTTCATGGCATTCTATTTGCAGAAAAAAGTATGTTCTATATAAACTCTGCAAGTGTACTTACAATTATAAGAAAACGGCGAAGTCATATTTGATGAGATTTTGGTGTCAAAACAGGGAATAATCATATATCTAGATTAGTCATCCAGAAGAAGCTTGTCATAAACAAAATAAGATGGTTGAATTGGGGGAGTGTCATAATAGGCTAAGTGAACTTGATGTCAAACTAAGTGGAAGGCAAGTTGTATGGAACGGTAGAACGGTACTATGAAGTAACCCGAGCATCTAAACCTTTTAAAACTTGTTCAGTACCATTATAAGCTCCATTTAAAACCTTGCACAGCCGGTGACAGACAAGGAATATTTTAAAATCCTGAGTTACCTATTTTTTAAAAAAGGGGATACTTTAAAATCCTCTTGGGTGTGTAACTCGCTTGTGTTTACAAATGGGTTGAGGAGGTTCCCTTTCAGTTCATTTCATCTCATCTTTTTCTTAACCTCTTCTTTATTTTTTTTACTCGTGAAGTATCAGAAAGGAACACAAATTTAATCCAAAGTTAAACAGAATGATCTATCATAAGAGAAAGCAAAATCATCACAAAGAATCTCAGAATCTCTTAAGCATCATACATCCACAAGTGAGATTAATAGTTTGTTTAGCCAAACTTCTAAGAAGCCAGAAGCTTATTATTTAAAAAGTGCTTACTTTAGAGTTGAACAGGCTATATATAGAATGAAAGAAGAAACTCTATGATATATCTTGCATGTCTTAATGAATCTCTAGCTTCTTCCCAATTTTTGTTTCCAGGATTAGTACTGGAAATGATAGTTTGAAAGTTGTTTGTGAAGGTTGGATGAGCGATAGTCTAAGGGCTCTTCTGAGATGAGCTATTTTCTTGTTTACCATCTGGGCACGGTCATGTTGTTTCCCTTGATTGGCATGGGCCATGTTGTTTCCCTGGATTGGCTTACACAACTTGTATTCCTGTTCTCAATCCTATTTAGCTCGACTGTTGTATATGTGATTGAGTTACTAAGCATACTTGTTCTGTCAAACACGTTTTCGTCTTTATTGAATATATACATTGATCTCCTAATAACACAGAATTTGTTTCACTTTGATCTTTATATCAGGATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATA-CCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACT-CAATTTTCAAGATTATTGGA-CAAAGGC</genome_strand>
        <mrna_strand>ATTTCGTTGAAAGCATGGCTGGATATTCTCTGGTTTGCTACCTTTTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGGATCGACACAACGGAAATCTTCTATTGGATGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAG................................................................................................................ATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAA.................................................................................GTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGTTACCCTTGTTTCAAGGGTGGCCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAG-TTATCCACACCGAAACCTGACTATACGTGTGAAGAG-AACCGATCTTTAACTAGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCATTATATGGATGTGTTCGTCTGATTCAGTCGAGGTTAAAGGATTGCTTGTCC-TTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAG-TGTACCTGCGAATGTTGTATTGAAATGTACCCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCCAATTNTCAAGATTATTGGAGAAAAGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E289198" ref_strand="+" ref_description="SGN-E289198 [cLES-18-N16]">
      <seq>tccaagcgagttctttgattatttcaaagttctatgcatccaagggtttctcacatgtcggaagcacgcagagcgtataattcttcttgtcgagatgcttcaggattctggttacccttgtttcaagggtggtccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagtttatccacaccgaaacgtgattatacatgtgaagagaaaccgatctttaacttgtttgctgagaggggcttggttgggaaagagcaattcactatatgaacgtgttcttctgattctgtcgaggttaaaggattgcttgtcctttgcagtttgcttctctttctgaggaatttgtagttgtacctgcgaatgttgtattgaaatataccaggtgcaagctctcttcaagaagagctttaatttctagtttcactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="7736" stop="3266"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7436" g_stop="7409" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7408" i_stop="7328" i_length="81">
            <donor d_prob="0.993" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7327" g_stop="7253" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="103" r_length="75" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7252" i_stop="4100" i_length="3153">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4099" g_stop="4016" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="104" r_stop="187" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3935" g_stop="3566" g_length="370"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="557" r_length="370" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E289198" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E289198" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7436" e_stop="7409"/>
          <exon e_start="7327" e_stop="7253"/>
          <exon e_start="4099" e_stop="4016"/>
          <exon e_start="3935" e_stop="3566"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAGCGAGTTCTTTGATTATTTCAAAGTAAAATATTGTTTACTATGTATTTTGTATCTAGACTTCTTTTTGTTTTTTTGTGCTTTAAACCTTTTTTCCTGTCTTCAGGTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAGGTAGATCCTGATATGTAAAACCTTTGTTTCTGATATATGAATCTCACTTACTAATGGATGGTGGAACGGGGACTGGGGGAATTTTGTAAAAGTAGGAAAGGATTAGAAATGTCCTGTAGTTCTGATGCTGCAAACTTCCCATTTTTCAGTATCTTAGACTTCCATATTTGGTAGGCTAAGCCTTTATCAAGGAAGACTTTTTTCCAACTTTACTCTTTTTGGATCTCGAAAATACCACCAAAGATGCACCTATCAAGAAAAAGAAGTGTCAAAGATGCAGTACAAAATTACGTACTGCTCCTCGATATCCCAAATTAAGTATACTGCTTTGACTTGTCACGGTATCAAGAGATGATCTGAAGATGTTAGTTACTTCTTATTTAAGGGGGTATGTGTTGGGAGCATCACTTTTGTCTTCTTCTGAGGGTGTATGTGCTGGAGAAAGATGGCAAGTTCAACGTGAAATCAGCCTATAAATTACTAGACATTTCAACTGAAACCAAAGATATGTGGCCTTGGAAGATGATCTGGAAAGTGAAGATACCACATAAGGTGGCTTGCTTCACATGGCTTGTTGCAAGACAATGTGTTCCGACTCAGGATAACTTAATGAAAAGAGGAAAGGACTTATGCTCCAGATGTTCTTTTTGTGAATCTGAGACAGAGACAATAAACCATCTTTTTTTGCATTGTAAATGACTGAGAAACTATGGAACTATTTCATTAACATGAGAGGTATCACATGGACCATGCCTAGAAATACTGCATAAGTCCTAGCATGTTGGAATAGAGATGGAAATAGGACACAAGGAGAGATGGAAGATTGTCGCTGCCTGCATCTGGTGGACAATATGGAGTGAGAGAAATCAGAGATGTTTTGAGAACAAGAGCATCCCTTTCCAAAGCATTAAAATGAATTGTTTAGTGACCTTTTAGAGCCTGTTTGGCTCAGCTTAAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAACTGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAAACTTATTTTAAGCCAAAAGTTAAAAGCTGGGGTAGGGGTGCTTTTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTCCAAATTACCCATAAAACCCTAACATCTCTTTCTTCTATTTTTCCCTTTTCACGTTTGGCATAACAACTTCAGCACTTCTATCCAAACGCATAACTGCTTATTTTAAAAATAAGTTTCAACACTTTCAAAAGTACTTTTTTAAAGCTGCTTTTATTAAGCCCATCCAAACGGGCTCTTAGTCTTTTACTTTTGGTGTATCTATTTATTTCCTAGGATCCGGGGGACATCACCCTATTCTTAGATAATTTATGAGGGAGATGCGTGTTTAGATTCTTTTTGGTAAATCCTCTATACTTTTGATGGAATTACCACAGGAGTTCACTATTGGTATACTTATCTGTTTATAATACCAGTTAACTTTCTCAAAAATAAATAAATAAAGATCTTATAACTGTCATAAACAGAATCAAGAAGCTACCATTTGTGTCTCATAAAATTGGCAATAGAGGAGAAACAGTTAAATCTCATATTCATTTTCTATTTTCTACCCATAGAGAATTTATACTGATTGAGTTAATCTATTAGGAGAAGACCAAGGGTTTACAACAAAGAATGTATATCCTTGGGAAAATTGATTGAAATTTACTGGGAAGGAAGAAGGATCTCCATATAGTATTCATTAACTTAGAGAAAGCATATGATGGAGTGCAGAGATGCCTTTTGATGGTGCTTGAAAAGAAAGAAATCCATTCAACTGTAGTATAGGATATGTATGAGGGATTATTCACAAGTGTGACAACAGAGAGAGGAGATTTAGAGGCAGTTCATGTAACTGTTGTTTTAGATGAAGGATCTGCCTAAACTTGTGCTTGTTCAAATGGTTTTGAATGGGCTAACCAATAGTATTTAGGGTGATGTTCATGGCATTCTATTTGCAGAAAAAAGTATGTTCTATATAAACTCTGCAAGTGTACTTACAATTATAAGAAAACGGCGAAGTCATATTTGATGAGATTTTGGTGTCAAAACAGGGAATAATCATATATCTAGATTAGTCATCCAGAAGAAGCTTGTCATAAACAAAATAAGATGGTTGAATTGGGGGAGTGTCATAATAGGCTAAGTGAACTTGATGTCAAACTAAGTGGAAGGCAAGTTGTATGGAACGGTAGAACGGTACTATGAAGTAACCCGAGCATCTAAACCTTTTAAAACTTGTTCAGTACCATTATAAGCTCCATTTAAAACCTTGCACAGCCGGTGACAGACAAGGAATATTTTAAAATCCTGAGTTACCTATTTTTTAAAAAAGGGGATACTTTAAAATCCTCTTGGGTGTGTAACTCGCTTGTGTTTACAAATGGGTTGAGGAGGTTCCCTTTCAGTTCATTTCATCTCATCTTTTTCTTAACCTCTTCTTTATTTTTTTTACTCGTGAAGTATCAGAAAGGAACACAAATTTAATCCAAAGTTAAACAGAATGATCTATCATAAGAGAAAGCAAAATCATCACAAAGAATCTCAGAATCTCTTAAGCATCATACATCCACAAGTGAGATTAATAGTTTGTTTAGCCAAACTTCTAAGAAGCCAGAAGCTTATTATTTAAAAAGTGCTTACTTTAGAGTTGAACAGGCTATATATAGAATGAAAGAAGAAACTCTATGATATATCTTGCATGTCTTAATGAATCTCTAGCTTCTTCCCAATTTTTGTTTCCAGGATTAGTACTGGAAATGATAGTTTGAAAGTTGTTTGTGAAGGTTGGATGAGCGATAGTCTAAGGGCTCTTCTGAGATGAGCTATTTTCTTGTTTACCATCTGGGCACGGTCATGTTGTTTCCCTTGATTGGCATGGGCCATGTTGTTTCCCTGGATTGGCTTACACAACTTGTATTCCTGTTCTCAATCCTATTTAGCTCGACTGTTGTATATGTGATTGAGTTACTAAGCATACTTGTTCTGTCAAACACGTTTTCGTCTTTATTGAATATATACATTGATCTCCTAATAACACAGAATTTGTTTCACTTTGATCTTTATATCAGGATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTC</genome_strand>
        <mrna_strand>TCCAAGCGAGTTCTTTGATTATTTCAAA.................................................................................GTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E588400" ref_strand="+" ref_description="SGN-E588400 [41952]">
      <seq>tttcatgctatctaattcacctggaaggtgtaaattttgaaagtgcaccatttaaattgacacgtgaacttcttgagatcatggattctgatgctgaaggagttccaagcgagttctttgattatttcaaagttctatgcatccaagggtttctcacatgtcggaagcacgcagagcgtataattcttcttgtcgagatgctacaggattctggttacccttgtttcaagggtggcccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagttatccacaccgaaacctgactatacgtgtgaagagaaccgatctttaactagtttgctgagaggggcttggttgggaaagagcaattcattatatggatgtgttcgtctgattcagtcgaggttaaaggattgcttgtccttgcagtttgcttctctttctgaggaatttgtagttgtacctgcgaatgttgtattgaaatgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="7950" stop="3315"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7650" g_stop="7575" g_length="76"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="77" r_length="77" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7574" i_stop="7463" i_length="112">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7462" g_stop="7409" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="131" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7408" i_stop="7328" i_length="81">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7327" g_stop="7253" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="132" r_stop="206" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7252" i_stop="4100" i_length="3153">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4099" g_stop="4016" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="207" r_stop="290" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="3935" g_stop="3615" g_length="321"/>
          <reference_exon_boundary r_type="cDNA" r_start="291" r_stop="608" r_length="318" r_score="0.960"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E588400" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E588400" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7650" e_stop="7575"/>
          <exon e_start="7462" e_stop="7409"/>
          <exon e_start="7327" e_stop="7253"/>
          <exon e_start="4099" e_stop="4016"/>
          <exon e_start="3935" e_stop="3615"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCATGCTATCTAATTCACCTGG-AGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAGGTATGTGCTGCTGAAAAATCTCATGTCTAACTTTTTAGTTCTACCCATTATTTTATCTTCTGGAGGTGTTTGATACAGTTTCTCAGCATATGTTGTGGTTGATTTGTGCTAGATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAAGTAAAATATTGTTTACTATGTATTTTGTATCTAGACTTCTTTTTGTTTTTTTGTGCTTTAAACCTTTTTTCCTGTCTTCAGGTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAGGTAGATCCTGATATGTAAAACCTTTGTTTCTGATATATGAATCTCACTTACTAATGGATGGTGGAACGGGGACTGGGGGAATTTTGTAAAAGTAGGAAAGGATTAGAAATGTCCTGTAGTTCTGATGCTGCAAACTTCCCATTTTTCAGTATCTTAGACTTCCATATTTGGTAGGCTAAGCCTTTATCAAGGAAGACTTTTTTCCAACTTTACTCTTTTTGGATCTCGAAAATACCACCAAAGATGCACCTATCAAGAAAAAGAAGTGTCAAAGATGCAGTACAAAATTACGTACTGCTCCTCGATATCCCAAATTAAGTATACTGCTTTGACTTGTCACGGTATCAAGAGATGATCTGAAGATGTTAGTTACTTCTTATTTAAGGGGGTATGTGTTGGGAGCATCACTTTTGTCTTCTTCTGAGGGTGTATGTGCTGGAGAAAGATGGCAAGTTCAACGTGAAATCAGCCTATAAATTACTAGACATTTCAACTGAAACCAAAGATATGTGGCCTTGGAAGATGATCTGGAAAGTGAAGATACCACATAAGGTGGCTTGCTTCACATGGCTTGTTGCAAGACAATGTGTTCCGACTCAGGATAACTTAATGAAAAGAGGAAAGGACTTATGCTCCAGATGTTCTTTTTGTGAATCTGAGACAGAGACAATAAACCATCTTTTTTTGCATTGTAAATGACTGAGAAACTATGGAACTATTTCATTAACATGAGAGGTATCACATGGACCATGCCTAGAAATACTGCATAAGTCCTAGCATGTTGGAATAGAGATGGAAATAGGACACAAGGAGAGATGGAAGATTGTCGCTGCCTGCATCTGGTGGACAATATGGAGTGAGAGAAATCAGAGATGTTTTGAGAACAAGAGCATCCCTTTCCAAAGCATTAAAATGAATTGTTTAGTGACCTTTTAGAGCCTGTTTGGCTCAGCTTAAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAACTGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAAACTTATTTTAAGCCAAAAGTTAAAAGCTGGGGTAGGGGTGCTTTTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTCCAAATTACCCATAAAACCCTAACATCTCTTTCTTCTATTTTTCCCTTTTCACGTTTGGCATAACAACTTCAGCACTTCTATCCAAACGCATAACTGCTTATTTTAAAAATAAGTTTCAACACTTTCAAAAGTACTTTTTTAAAGCTGCTTTTATTAAGCCCATCCAAACGGGCTCTTAGTCTTTTACTTTTGGTGTATCTATTTATTTCCTAGGATCCGGGGGACATCACCCTATTCTTAGATAATTTATGAGGGAGATGCGTGTTTAGATTCTTTTTGGTAAATCCTCTATACTTTTGATGGAATTACCACAGGAGTTCACTATTGGTATACTTATCTGTTTATAATACCAGTTAACTTTCTCAAAAATAAATAAATAAAGATCTTATAACTGTCATAAACAGAATCAAGAAGCTACCATTTGTGTCTCATAAAATTGGCAATAGAGGAGAAACAGTTAAATCTCATATTCATTTTCTATTTTCTACCCATAGAGAATTTATACTGATTGAGTTAATCTATTAGGAGAAGACCAAGGGTTTACAACAAAGAATGTATATCCTTGGGAAAATTGATTGAAATTTACTGGGAAGGAAGAAGGATCTCCATATAGTATTCATTAACTTAGAGAAAGCATATGATGGAGTGCAGAGATGCCTTTTGATGGTGCTTGAAAAGAAAGAAATCCATTCAACTGTAGTATAGGATATGTATGAGGGATTATTCACAAGTGTGACAACAGAGAGAGGAGATTTAGAGGCAGTTCATGTAACTGTTGTTTTAGATGAAGGATCTGCCTAAACTTGTGCTTGTTCAAATGGTTTTGAATGGGCTAACCAATAGTATTTAGGGTGATGTTCATGGCATTCTATTTGCAGAAAAAAGTATGTTCTATATAAACTCTGCAAGTGTACTTACAATTATAAGAAAACGGCGAAGTCATATTTGATGAGATTTTGGTGTCAAAACAGGGAATAATCATATATCTAGATTAGTCATCCAGAAGAAGCTTGTCATAAACAAAATAAGATGGTTGAATTGGGGGAGTGTCATAATAGGCTAAGTGAACTTGATGTCAAACTAAGTGGAAGGCAAGTTGTATGGAACGGTAGAACGGTACTATGAAGTAACCCGAGCATCTAAACCTTTTAAAACTTGTTCAGTACCATTATAAGCTCCATTTAAAACCTTGCACAGCCGGTGACAGACAAGGAATATTTTAAAATCCTGAGTTACCTATTTTTTAAAAAAGGGGATACTTTAAAATCCTCTTGGGTGTGTAACTCGCTTGTGTTTACAAATGGGTTGAGGAGGTTCCCTTTCAGTTCATTTCATCTCATCTTTTTCTTAACCTCTTCTTTATTTTTTTTACTCGTGAAGTATCAGAAAGGAACACAAATTTAATCCAAAGTTAAACAGAATGATCTATCATAAGAGAAAGCAAAATCATCACAAAGAATCTCAGAATCTCTTAAGCATCATACATCCACAAGTGAGATTAATAGTTTGTTTAGCCAAACTTCTAAGAAGCCAGAAGCTTATTATTTAAAAAGTGCTTACTTTAGAGTTGAACAGGCTATATATAGAATGAAAGAAGAAACTCTATGATATATCTTGCATGTCTTAATGAATCTCTAGCTTCTTCCCAATTTTTGTTTCCAGGATTAGTACTGGAAATGATAGTTTGAAAGTTGTTTGTGAAGGTTGGATGAGCGATAGTCTAAGGGCTCTTCTGAGATGAGCTATTTTCTTGTTTACCATCTGGGCACGGTCATGTTGTTTCCCTTGATTGGCATGGGCCATGTTGTTTCCCTGGATTGGCTTACACAACTTGTATTCCTGTTCTCAATCCTATTTAGCTCGACTGTTGTATATGTGATTGAGTTACTAAGCATACTTGTTCTGTCAAACACGTTTTCGTCTTTATTGAATATATACATTGATCTCCTAATAACACAGAATTTGTTTCACTTTGATCTTTATATCAGGATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATAT</genome_strand>
        <mrna_strand>TTTCATGCTATCTAATTCACCTGGAAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAG................................................................................................................ATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAA.................................................................................GTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGTTACCCTTGTTTCAAGGGTGGCCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAG-TTATCCACACCGAAACCTGACTATACGTGTGAAGAG-AACCGATCTTTAACTAGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCATTATATGGATGTGTTCGTCTGATTCAGTCGAGGTTAAAGGATTGCTTGTCC-TTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E240543" ref_strand="+" ref_description="SGN-E240543 [cLED-21-O17]">
      <seq>agggtggtccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagtttatccacaccgaaacgtgattatacatgtgaagagaaaccgatctttaacttgtttgctgagaggggcttggttgggaaagagcaattcactatatgaacgtgttcttctgattctgtcgaggttaaaggattgcttgtccttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="4377" stop="3376"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4077" g_stop="4016" g_length="62"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="3935" g_stop="3676" g_length="260"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="322" r_length="260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E240543" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>322</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E240543" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4077" e_stop="4016"/>
          <exon e_start="3935" e_stop="3676"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTT</genome_strand>
        <mrna_strand>AGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E419450" ref_strand="+" ref_description="SGN-E419450 [STM-29-L5]">
      <seq>ctggtttgctaccttttgcagataaaggatcgacacaacggaaatcttctattggatgaagaaggacatatcatacacattgactttggtttcatgctatctaattcacctggaggtgtaaattttgaaagtgcaccatttaaattgacacgtgaacttcttgagatcatggattctgatgctgaaggagttccaagcgagttctttgattatttcaaagttctatgcatccaagggtttctcacatgtcggaagcacgcagagcgtataattcttcttgtcgagatgctacaggattctggttacccttgtttcaagggtggcccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatgaggtcaaagtgagttatccacaccgaaacctgactatacgtgtgaagagaaccgatctttaactagtttgctgagaggggcttggttgggaaagagcaattcattatatggatgtgttcgtctgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="9831" stop="3405"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9531" g_stop="9511" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="21" r_length="21" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9510" i_stop="7719" i_length="1792">
            <donor d_prob="0.827" d_score="0.00"/>
            <acceptor a_prob="0.762" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7718" g_stop="7575" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="22" r_stop="165" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7574" i_stop="7463" i_length="112">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7462" g_stop="7409" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="166" r_stop="219" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7408" i_stop="7328" i_length="81">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7327" g_stop="7253" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="294" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7252" i_stop="4100" i_length="3153">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4099" g_stop="4016" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="295" r_stop="378" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3935" g_stop="3705" g_length="231"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="607" r_length="229" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E419450" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E419450" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9531" e_stop="9511"/>
          <exon e_start="7718" e_stop="7575"/>
          <exon e_start="7462" e_stop="7409"/>
          <exon e_start="7327" e_stop="7253"/>
          <exon e_start="4099" e_stop="4016"/>
          <exon e_start="3935" e_stop="3705"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGGTTTGCTACCTTTTGCAGGTGAACTGAATGACTTGTCTCTGTATAATTTTATGATTGCATTAAGAAGCATAAAACACAGATCATATATTTCTGTTGTCAGCAGATGCTTCTTTCTCTAATATGTTTCACCAAAATAGATCCATTTTACATGGGCTACATGCTAGCCATATCCTTTCATTATTAATCGGACATCTTAGTCTCTTCTTGTGCCCCAATACCCCATAAAAATTGAAAATAAGAGATGAAAATTGGGAAAAGATGTGTTTGAAAGAAAAATAAAACTAAATGTGGATGCCAGCACTTGTCTTGAAAGTGATTGAATTTTTCTGATGAAGTAACACTTGTATTGATCAAATGAGAAACCTGGTATTCAAGTAGTAAACAAGAAGTTGAGAACCTATTCAAGACTATGATTTTTACATTAAGTCAGAAAGTACCAGACATCTAAGCTAGCAGGGATTACATGGGTGCGCTGAATATTACGAAGAAACATAGACTACCCCCTTCATCTGTATAATAGTAATTTCTACTGCTCTCCTCCCCAAGGCTCTCTTGTTTCCCTCTCTGCACTACCACATTAGTGCAAAGGAGCTACATTCCTTTCTTTGCTTCTTCTCCGTCCCTTGACAGCCTAGCTCAACTAAACAGGTATAGTCCATCATATCTTTGACGACAGCTGTCATCATCTGTAACTTCCATGGTAATTCAAAGATGAAAATGGAACTGCCGATTAGACAATAAAATTTTCCCTTTGCACCGAATGCAATCAATAGAGCTAAAAAGCATTGGGCAATATTTAATTGTAAGGGACGGAATGGAAGAGCTAAAACACAATCAAATAGCAGAAAATGGACAAGCAGGGAGATTATGGCCTTGCAAAGCCAGAAACAGTTAGGTTTCTTCTTCAAGCTGTATATTTGTCACAAAGACTCATCTGTCTCATTTACATTATACTACACCAGACTCTCCATTAAGAATGAGAATGTTTCATGGTAGTATATGTCAGAATGGTGGAAAAAGTGGTGCTGTTGTTATTCAAGGATAAAGAGTATGACATGTCGTGATGTGTAAAGAAATGCTAAATGTTAGTTTTCCATGGGTTGCATGGCCCAAAAGTTTTCCTGATTCCCTAGGAGAAGTCTTTATAGATACTGTCTCTAGTTCAAATTCAATTAATCAACTAATTGTGATTTATGACAATCATAATTGTTGCATGATATTGGTGAGCCTCTGTCAAGAAAGGGATCTCAGATGTTACGAAGGCAAAAGAGAGAATTCACAACCTGAGGCCCATTGTCTTATCCCTCTTAGCATCAGGTGCAGCATGAAGAATTCATATGGTGTGGATATCCATCTTTTAGATTTCCTCAGTTTCCTCTCACATTTGATTAGTCGGAACTAGTTGTTTCTAAGGTTCCTGGATATGGAAATAGATACACATGTAAGGATATCATAATGTAGTCACAAGTCACAATGCAATTATTGTGCTCTTTTTGTTTTAATACATTGTTCACATAGCTATAAAGAAAAGTAATGGCTGTGTGCTATTTGTTGATGTAACTTGTAACATGAGTTTGTGTAGTGAGTTATTTTATACTCCCTTTTGACACACTAACTCAAATGTTCACTTGTTTCTCAGTGTCAAATGTTTGTTGTGTCAAGGGTTCCAGAAATAATTTTGCATGATTGAAATCTGTTTTTTTTTTCTTTGATTTTTCGTAATGTGGCTACTTTGAATCTCTCCAAAATTAACCTTTCCTAGTACAGTAGGTATTGCAATGATGACCAGTCTTTTTGCTTCTGTTGCTAGATAAAGGATCGACACAACGGAAATCTTCTATTGGACGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAGGTATGTGCTGCTGAAAAATCTCATGTCTAACTTTTTAGTTCTACCCATTATTTTATCTTCTGGAGGTGTTTGATACAGTTTCTCAGCATATGTTGTGGTTGATTTGTGCTAGATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAAGTAAAATATTGTTTACTATGTATTTTGTATCTAGACTTCTTTTTGTTTTTTTGTGCTTTAAACCTTTTTTCCTGTCTTCAGGTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAGGTAGATCCTGATATGTAAAACCTTTGTTTCTGATATATGAATCTCACTTACTAATGGATGGTGGAACGGGGACTGGGGGAATTTTGTAAAAGTAGGAAAGGATTAGAAATGTCCTGTAGTTCTGATGCTGCAAACTTCCCATTTTTCAGTATCTTAGACTTCCATATTTGGTAGGCTAAGCCTTTATCAAGGAAGACTTTTTTCCAACTTTACTCTTTTTGGATCTCGAAAATACCACCAAAGATGCACCTATCAAGAAAAAGAAGTGTCAAAGATGCAGTACAAAATTACGTACTGCTCCTCGATATCCCAAATTAAGTATACTGCTTTGACTTGTCACGGTATCAAGAGATGATCTGAAGATGTTAGTTACTTCTTATTTAAGGGGGTATGTGTTGGGAGCATCACTTTTGTCTTCTTCTGAGGGTGTATGTGCTGGAGAAAGATGGCAAGTTCAACGTGAAATCAGCCTATAAATTACTAGACATTTCAACTGAAACCAAAGATATGTGGCCTTGGAAGATGATCTGGAAAGTGAAGATACCACATAAGGTGGCTTGCTTCACATGGCTTGTTGCAAGACAATGTGTTCCGACTCAGGATAACTTAATGAAAAGAGGAAAGGACTTATGCTCCAGATGTTCTTTTTGTGAATCTGAGACAGAGACAATAAACCATCTTTTTTTGCATTGTAAATGACTGAGAAACTATGGAACTATTTCATTAACATGAGAGGTATCACATGGACCATGCCTAGAAATACTGCATAAGTCCTAGCATGTTGGAATAGAGATGGAAATAGGACACAAGGAGAGATGGAAGATTGTCGCTGCCTGCATCTGGTGGACAATATGGAGTGAGAGAAATCAGAGATGTTTTGAGAACAAGAGCATCCCTTTCCAAAGCATTAAAATGAATTGTTTAGTGACCTTTTAGAGCCTGTTTGGCTCAGCTTAAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAACTGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAAACTTATTTTAAGCCAAAAGTTAAAAGCTGGGGTAGGGGTGCTTTTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTCCAAATTACCCATAAAACCCTAACATCTCTTTCTTCTATTTTTCCCTTTTCACGTTTGGCATAACAACTTCAGCACTTCTATCCAAACGCATAACTGCTTATTTTAAAAATAAGTTTCAACACTTTCAAAAGTACTTTTTTAAAGCTGCTTTTATTAAGCCCATCCAAACGGGCTCTTAGTCTTTTACTTTTGGTGTATCTATTTATTTCCTAGGATCCGGGGGACATCACCCTATTCTTAGATAATTTATGAGGGAGATGCGTGTTTAGATTCTTTTTGGTAAATCCTCTATACTTTTGATGGAATTACCACAGGAGTTCACTATTGGTATACTTATCTGTTTATAATACCAGTTAACTTTCTCAAAAATAAATAAATAAAGATCTTATAACTGTCATAAACAGAATCAAGAAGCTACCATTTGTGTCTCATAAAATTGGCAATAGAGGAGAAACAGTTAAATCTCATATTCATTTTCTATTTTCTACCCATAGAGAATTTATACTGATTGAGTTAATCTATTAGGAGAAGACCAAGGGTTTACAACAAAGAATGTATATCCTTGGGAAAATTGATTGAAATTTACTGGGAAGGAAGAAGGATCTCCATATAGTATTCATTAACTTAGAGAAAGCATATGATGGAGTGCAGAGATGCCTTTTGATGGTGCTTGAAAAGAAAGAAATCCATTCAACTGTAGTATAGGATATGTATGAGGGATTATTCACAAGTGTGACAACAGAGAGAGGAGATTTAGAGGCAGTTCATGTAACTGTTGTTTTAGATGAAGGATCTGCCTAAACTTGTGCTTGTTCAAATGGTTTTGAATGGGCTAACCAATAGTATTTAGGGTGATGTTCATGGCATTCTATTTGCAGAAAAAAGTATGTTCTATATAAACTCTGCAAGTGTACTTACAATTATAAGAAAACGGCGAAGTCATATTTGATGAGATTTTGGTGTCAAAACAGGGAATAATCATATATCTAGATTAGTCATCCAGAAGAAGCTTGTCATAAACAAAATAAGATGGTTGAATTGGGGGAGTGTCATAATAGGCTAAGTGAACTTGATGTCAAACTAAGTGGAAGGCAAGTTGTATGGAACGGTAGAACGGTACTATGAAGTAACCCGAGCATCTAAACCTTTTAAAACTTGTTCAGTACCATTATAAGCTCCATTTAAAACCTTGCACAGCCGGTGACAGACAAGGAATATTTTAAAATCCTGAGTTACCTATTTTTTAAAAAAGGGGATACTTTAAAATCCTCTTGGGTGTGTAACTCGCTTGTGTTTACAAATGGGTTGAGGAGGTTCCCTTTCAGTTCATTTCATCTCATCTTTTTCTTAACCTCTTCTTTATTTTTTTTACTCGTGAAGTATCAGAAAGGAACACAAATTTAATCCAAAGTTAAACAGAATGATCTATCATAAGAGAAAGCAAAATCATCACAAAGAATCTCAGAATCTCTTAAGCATCATACATCCACAAGTGAGATTAATAGTTTGTTTAGCCAAACTTCTAAGAAGCCAGAAGCTTATTATTTAAAAAGTGCTTACTTTAGAGTTGAACAGGCTATATATAGAATGAAAGAAGAAACTCTATGATATATCTTGCATGTCTTAATGAATCTCTAGCTTCTTCCCAATTTTTGTTTCCAGGATTAGTACTGGAAATGATAGTTTGAAAGTTGTTTGTGAAGGTTGGATGAGCGATAGTCTAAGGGCTCTTCTGAGATGAGCTATTTTCTTGTTTACCATCTGGGCACGGTCATGTTGTTTCCCTTGATTGGCATGGGCCATGTTGTTTCCCTGGATTGGCTTACACAACTTGTATTCCTGTTCTCAATCCTATTTAGCTCGACTGTTGTATATGTGATTGAGTTACTAAGCATACTTGTTCTGTCAAACACGTTTTCGTCTTTATTGAATATATACATTGATCTCCTAATAACACAGAATTTGTTTCACTTTGATCTTTATATCAGGATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTC</genome_strand>
        <mrna_strand>CTGGTTTGCTACCTTTTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGGATCGACACAACGGAAATCTTCTATTGGATGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAG................................................................................................................ATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAA.................................................................................GTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGTTACCCTTGTTTCAAGGGTGGCCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAG-TTATCCACACCGAAACCTGACTATACGTGTGAAGAG-AACCGATCTTTAACTAGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCATTATATGGATGTGTTCGTCTGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E444133" ref_strand="+" ref_description="SGN-E444133 [cSTA-41-B24]">
      <seq>agctggtttgctaccttttgcagataaaggatcgacacaacggaaatcttctattggatgaagaaggacatatcatacacattgactttggtttcatgcctatctaattcacctggaggtgtaaattttgaaagtgcaccatttaaattgacacgtgaacttcttgagatcatggattctgatgctgaaggagttccaagcgagttctttgattatttcaaagttctatgcatccaagggtttctcacatgtcggaagcacgcagagcgtataattcttcttgtcgagatgctacaggattctggttacccttgtttcaagggtggcccccgaacaattcagaacctaagaaagagatttcatcttagtttaacagaagagcaatgtgtttccttggtactttctttgattagcagtagcttggatgcgtggcgtactcgtcaatatgattattatcagagggtcttaaatgggatattatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="9831" stop="3535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="9533" g_stop="9511" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="23" r_length="23" r_score="0.913"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="9510" i_stop="7719" i_length="1792">
            <donor d_prob="0.827" d_score="0.00"/>
            <acceptor a_prob="0.762" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7718" g_stop="7575" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="168" r_length="145" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7574" i_stop="7463" i_length="112">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7462" g_stop="7409" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="222" r_length="54" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="7408" i_stop="7328" i_length="81">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="7327" g_stop="7253" g_length="75"/>
          <reference_exon_boundary r_type="cDNA" r_start="223" r_stop="297" r_length="75" r_score="0.987"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="7252" i_stop="4100" i_length="3153">
            <donor d_prob="0.995" d_score="0.98"/>
            <acceptor a_prob="0.958" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="4099" g_stop="4016" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="298" r_stop="381" r_length="84" r_score="0.988"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.719" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="3935" g_stop="3835" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="482" r_length="101" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E444133" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>481</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E444133" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="9533" e_stop="9511"/>
          <exon e_start="7718" e_stop="7575"/>
          <exon e_start="7462" e_stop="7409"/>
          <exon e_start="7327" e_stop="7253"/>
          <exon e_start="4099" e_stop="4016"/>
          <exon e_start="3935" e_stop="3835"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTGGTTTGCTACCTTTTGCAGGTGAACTGAATGACTTGTCTCTGTATAATTTTATGATTGCATTAAGAAGCATAAAACACAGATCATATATTTCTGTTGTCAGCAGATGCTTCTTTCTCTAATATGTTTCACCAAAATAGATCCATTTTACATGGGCTACATGCTAGCCATATCCTTTCATTATTAATCGGACATCTTAGTCTCTTCTTGTGCCCCAATACCCCATAAAAATTGAAAATAAGAGATGAAAATTGGGAAAAGATGTGTTTGAAAGAAAAATAAAACTAAATGTGGATGCCAGCACTTGTCTTGAAAGTGATTGAATTTTTCTGATGAAGTAACACTTGTATTGATCAAATGAGAAACCTGGTATTCAAGTAGTAAACAAGAAGTTGAGAACCTATTCAAGACTATGATTTTTACATTAAGTCAGAAAGTACCAGACATCTAAGCTAGCAGGGATTACATGGGTGCGCTGAATATTACGAAGAAACATAGACTACCCCCTTCATCTGTATAATAGTAATTTCTACTGCTCTCCTCCCCAAGGCTCTCTTGTTTCCCTCTCTGCACTACCACATTAGTGCAAAGGAGCTACATTCCTTTCTTTGCTTCTTCTCCGTCCCTTGACAGCCTAGCTCAACTAAACAGGTATAGTCCATCATATCTTTGACGACAGCTGTCATCATCTGTAACTTCCATGGTAATTCAAAGATGAAAATGGAACTGCCGATTAGACAATAAAATTTTCCCTTTGCACCGAATGCAATCAATAGAGCTAAAAAGCATTGGGCAATATTTAATTGTAAGGGACGGAATGGAAGAGCTAAAACACAATCAAATAGCAGAAAATGGACAAGCAGGGAGATTATGGCCTTGCAAAGCCAGAAACAGTTAGGTTTCTTCTTCAAGCTGTATATTTGTCACAAAGACTCATCTGTCTCATTTACATTATACTACACCAGACTCTCCATTAAGAATGAGAATGTTTCATGGTAGTATATGTCAGAATGGTGGAAAAAGTGGTGCTGTTGTTATTCAAGGATAAAGAGTATGACATGTCGTGATGTGTAAAGAAATGCTAAATGTTAGTTTTCCATGGGTTGCATGGCCCAAAAGTTTTCCTGATTCCCTAGGAGAAGTCTTTATAGATACTGTCTCTAGTTCAAATTCAATTAATCAACTAATTGTGATTTATGACAATCATAATTGTTGCATGATATTGGTGAGCCTCTGTCAAGAAAGGGATCTCAGATGTTACGAAGGCAAAAGAGAGAATTCACAACCTGAGGCCCATTGTCTTATCCCTCTTAGCATCAGGTGCAGCATGAAGAATTCATATGGTGTGGATATCCATCTTTTAGATTTCCTCAGTTTCCTCTCACATTTGATTAGTCGGAACTAGTTGTTTCTAAGGTTCCTGGATATGGAAATAGATACACATGTAAGGATATCATAATGTAGTCACAAGTCACAATGCAATTATTGTGCTCTTTTTGTTTTAATACATTGTTCACATAGCTATAAAGAAAAGTAATGGCTGTGTGCTATTTGTTGATGTAACTTGTAACATGAGTTTGTGTAGTGAGTTATTTTATACTCCCTTTTGACACACTAACTCAAATGTTCACTTGTTTCTCAGTGTCAAATGTTTGTTGTGTCAAGGGTTCCAGAAATAATTTTGCATGATTGAAATCTGTTTTTTTTTTCTTTGATTTTTCGTAATGTGGCTACTTTGAATCTCTCCAAAATTAACCTTTCCTAGTACAGTAGGTATTGCAATGATGACCAGTCTTTTTGCTTCTGTTGCTAGATAAAGGATCGACACAACGGAAATCTTCTATTGGACGAAGAAGGACATATCATACACATTGACTTTGGTTTCATG-CTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAGGTATGTGCTGCTGAAAAATCTCATGTCTAACTTTTTAGTTCTACCCATTATTTTATCTTCTGGAGGTGTTTGATACAGTTTCTCAGCATATGTTGTGGTTGATTTGTGCTAGATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAAGTAAAATATTGTTTACTATGTATTTTGTATCTAGACTTCTTTTTGTTTTTTTGTGCTTTAAACCTTTTTTCCTGTCTTCAGGTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAGGTAGATCCTGATATGTAAAACCTTTGTTTCTGATATATGAATCTCACTTACTAATGGATGGTGGAACGGGGACTGGGGGAATTTTGTAAAAGTAGGAAAGGATTAGAAATGTCCTGTAGTTCTGATGCTGCAAACTTCCCATTTTTCAGTATCTTAGACTTCCATATTTGGTAGGCTAAGCCTTTATCAAGGAAGACTTTTTTCCAACTTTACTCTTTTTGGATCTCGAAAATACCACCAAAGATGCACCTATCAAGAAAAAGAAGTGTCAAAGATGCAGTACAAAATTACGTACTGCTCCTCGATATCCCAAATTAAGTATACTGCTTTGACTTGTCACGGTATCAAGAGATGATCTGAAGATGTTAGTTACTTCTTATTTAAGGGGGTATGTGTTGGGAGCATCACTTTTGTCTTCTTCTGAGGGTGTATGTGCTGGAGAAAGATGGCAAGTTCAACGTGAAATCAGCCTATAAATTACTAGACATTTCAACTGAAACCAAAGATATGTGGCCTTGGAAGATGATCTGGAAAGTGAAGATACCACATAAGGTGGCTTGCTTCACATGGCTTGTTGCAAGACAATGTGTTCCGACTCAGGATAACTTAATGAAAAGAGGAAAGGACTTATGCTCCAGATGTTCTTTTTGTGAATCTGAGACAGAGACAATAAACCATCTTTTTTTGCATTGTAAATGACTGAGAAACTATGGAACTATTTCATTAACATGAGAGGTATCACATGGACCATGCCTAGAAATACTGCATAAGTCCTAGCATGTTGGAATAGAGATGGAAATAGGACACAAGGAGAGATGGAAGATTGTCGCTGCCTGCATCTGGTGGACAATATGGAGTGAGAGAAATCAGAGATGTTTTGAGAACAAGAGCATCCCTTTCCAAAGCATTAAAATGAATTGTTTAGTGACCTTTTAGAGCCTGTTTGGCTCAGCTTAAAAGCTGGTCAAACTGACTTAAAAGCTGGTTTTTGACTTATTTAACTGTTTGGCAATACTCAAAATAGCTTATTTTAAGTTAAAAAAAACTTATTTTAAGCCAAAAGTTAAAAGCTGGGGTAGGGGTGCTTTTTTTTTTTTTAGCTTATAAGCTGTTTTAAGTTGACCATATTTTTATGTTTTTTCCCTTAATATTTTTATACAATCTCCAAATTACCCATAAAACCCTAACATCTCTTTCTTCTATTTTTCCCTTTTCACGTTTGGCATAACAACTTCAGCACTTCTATCCAAACGCATAACTGCTTATTTTAAAAATAAGTTTCAACACTTTCAAAAGTACTTTTTTAAAGCTGCTTTTATTAAGCCCATCCAAACGGGCTCTTAGTCTTTTACTTTTGGTGTATCTATTTATTTCCTAGGATCCGGGGGACATCACCCTATTCTTAGATAATTTATGAGGGAGATGCGTGTTTAGATTCTTTTTGGTAAATCCTCTATACTTTTGATGGAATTACCACAGGAGTTCACTATTGGTATACTTATCTGTTTATAATACCAGTTAACTTTCTCAAAAATAAATAAATAAAGATCTTATAACTGTCATAAACAGAATCAAGAAGCTACCATTTGTGTCTCATAAAATTGGCAATAGAGGAGAAACAGTTAAATCTCATATTCATTTTCTATTTTCTACCCATAGAGAATTTATACTGATTGAGTTAATCTATTAGGAGAAGACCAAGGGTTTACAACAAAGAATGTATATCCTTGGGAAAATTGATTGAAATTTACTGGGAAGGAAGAAGGATCTCCATATAGTATTCATTAACTTAGAGAAAGCATATGATGGAGTGCAGAGATGCCTTTTGATGGTGCTTGAAAAGAAAGAAATCCATTCAACTGTAGTATAGGATATGTATGAGGGATTATTCACAAGTGTGACAACAGAGAGAGGAGATTTAGAGGCAGTTCATGTAACTGTTGTTTTAGATGAAGGATCTGCCTAAACTTGTGCTTGTTCAAATGGTTTTGAATGGGCTAACCAATAGTATTTAGGGTGATGTTCATGGCATTCTATTTGCAGAAAAAAGTATGTTCTATATAAACTCTGCAAGTGTACTTACAATTATAAGAAAACGGCGAAGTCATATTTGATGAGATTTTGGTGTCAAAACAGGGAATAATCATATATCTAGATTAGTCATCCAGAAGAAGCTTGTCATAAACAAAATAAGATGGTTGAATTGGGGGAGTGTCATAATAGGCTAAGTGAACTTGATGTCAAACTAAGTGGAAGGCAAGTTGTATGGAACGGTAGAACGGTACTATGAAGTAACCCGAGCATCTAAACCTTTTAAAACTTGTTCAGTACCATTATAAGCTCCATTTAAAACCTTGCACAGCCGGTGACAGACAAGGAATATTTTAAAATCCTGAGTTACCTATTTTTTAAAAAAGGGGATACTTTAAAATCCTCTTGGGTGTGTAACTCGCTTGTGTTTACAAATGGGTTGAGGAGGTTCCCTTTCAGTTCATTTCATCTCATCTTTTTCTTAACCTCTTCTTTATTTTTTTTACTCGTGAAGTATCAGAAAGGAACACAAATTTAATCCAAAGTTAAACAGAATGATCTATCATAAGAGAAAGCAAAATCATCACAAAGAATCTCAGAATCTCTTAAGCATCATACATCCACAAGTGAGATTAATAGTTTGTTTAGCCAAACTTCTAAGAAGCCAGAAGCTTATTATTTAAAAAGTGCTTACTTTAGAGTTGAACAGGCTATATATAGAATGAAAGAAGAAACTCTATGATATATCTTGCATGTCTTAATGAATCTCTAGCTTCTTCCCAATTTTTGTTTCCAGGATTAGTACTGGAAATGATAGTTTGAAAGTTGTTTGTGAAGGTTGGATGAGCGATAGTCTAAGGGCTCTTCTGAGATGAGCTATTTTCTTGTTTACCATCTGGGCACGGTCATGTTGTTTCCCTTGATTGGCATGGGCCATGTTGTTTCCCTGGATTGGCTTACACAACTTGTATTCCTGTTCTCAATCCTATTTAGCTCGACTGTTGTATATGTGATTGAGTTACTAAGCATACTTGTTCTGTCAAACACGTTTTCGTCTTTATTGAATATATACATTGATCTCCTAATAACACAGAATTTGTTTCACTTTGATCTTTATATCAGGATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAGGTTTGTTACTGGTCCTGAAATTAATTAATTCCTTATTTTTATCATCTACTTGATCATTATGCTTTGTTTGTCTTTGCCAGCAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATG</genome_strand>
        <mrna_strand>AGCTGGTTTGCTACCTTTTGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAAGGATCGACACAACGGAAATCTTCTATTGGATGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAG................................................................................................................ATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAA.................................................................................GTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTACAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTCTGGTTACCCTTGTTTCAAGGGTGGCCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG................................................................................CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E416030" ref_strand="+" ref_description="SGN-E416030 [STM-22-I20]">
      <seq>gaatttttcagtagagatgcaatcagagtctgcaatagatcattgcagccttggttctgcttcagaaagttatagtaaatgcagagaggtcccatctcttccattgaagtcagatgctattgattcagaatgggtacgagttgtcttgactgtagatcctggtgttaggatggaggatatagtggaccaagaaccaccaagaaagaaagagcatcgaagggttcccagtacagtagccatcgaggaagttaagttagctgcattaaaaggcgaagcacctcctggactccctttgaaaggtgctggtcaggattcatctgatgcacaacctaaggtgacaaatggtggtcttcccaaggttagtgatgcactttctggagaactctgggaagtcaagaaggaaagaatacgcaaatgctctggttatgggaaattacctgngtgggacttgagatctttcatcgtgaagagtggtgatgattgcagacaggagcatcttgctgtacaacttatctcccacttctacgatatcttccaggaagctggtctgccgctttggttgcgtccttatgaagtcttagttacatcctcttatactgccctaattgaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="17053" stop="10978"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16753" g_stop="16501" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16500" i_stop="15582" i_length="919">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15581" g_stop="15501" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="334" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15500" i_stop="15422" i_length="79">
            <donor d_prob="0.575" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15421" g_stop="15299" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="457" r_length="123" r_score="0.976"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15298" i_stop="13372" i_length="1927">
            <donor d_prob="0.986" d_score="0.98"/>
            <acceptor a_prob="0.957" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13371" g_stop="13302" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="527" r_length="70" r_score="0.986"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13301" i_stop="11363" i_length="1939">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="11362" g_stop="11278" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="528" r_stop="612" r_length="85" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E416030" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E416030" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16753" e_stop="16501"/>
          <exon e_start="15581" e_stop="15501"/>
          <exon e_start="15421" e_stop="15299"/>
          <exon e_start="13371" e_stop="13302"/>
          <exon e_start="11362" e_stop="11278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTTTCGGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCTGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAGGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAGGTAACCTTCATCTCTGCTGCATACGTGAACATTCTTTTACTTCATGAGATGCAGTACTGCCTTTTGGATAAGATCAAGTGTATTATCTGATCTTCGTGAATTACGTGAATGTCTTTCTTTAATCGTCTTTTCATTAATTCTTATGGTCTAGCATCTATATGACCAATTGTCCTTCATATCTATGCTTCAAGACATCAAAGATGTATGTCTAAGTCACCGGGACATTTATTTGTTATATCTGGATATGCTGCTGTTTTGAACTATTAGGAGGGGATCAGGTGAACATCCAGTTATCCACCCCCATCAGTTTTGGTAGTAGGATCACACTGCTAAGCAGTTGCATTTTCTTAGAAATCTAAGGTTAGTGGAGAAAGATAATGGATAATATGGTGCTTGTTGGGAGCCATTAGGTAAGGATAAACCACGCCCCCAAAATCACAGAGCTTGAAGTTCTGATCCATCGTTGCAAATTTTTGTTAGTTTTAGTTGCTCCGGTGAGAACTGAAACTGGATTTTTTATGAAATTGAGGAGCTTTTTATGTTGAATTTATTAGTTTAACATTATCTTCTTCTATGCTGTTTTCTAGTGGAGATATTAATGTCACTGAGTGCTGTATGAGCGGATTTTAGGTGTTGATTCACTGTTATTCTTTGTCAAACAAAAGATAGGTCATAATCTTATGTCATGTTAAGCATCTTGTTACTCATTGAGTTTGAGATCTCATGTGATGTCTACTAACTCCCTCGCGGGATTTTCTTTTGAAAGATGATTACCGTTGTTTGTTTGATATTTTCATCTTTTGGGAGAATTGTTGCTCTATAAATATCACCATTCGTGATTATTTTGTTCATGAGTCCTACTTGTTCCTTTGATACTTCTCCATACATGAAGAAATCACAAACATGGTTCTCTTTACAGTTAGCTGCATTAAAAGGAGAAGCACCTCCTGGACTACCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAGGTAGAGACGTTGTCAGATGTTGTTCCTCTTCTTAATAGAACCTATAATTACACGTGCATGATAATCTCATTGAAAACAGGTCACAAATGGTGGTCTTCCCAATGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCTGTGAGTCCCACCATCTAATTTTTGTTGTTGTTTCCTTGATATTTTCTTCGTAATTTTTGATAAGTTAGTATGACATGTCTGCTTGCCTTATGTATAAAGAGAGGTTGATCTTTGGTCAAATTGCTAGCTTCTCTACTTGATGCTCGTAATTGGCTGCCAATGATTAGGACATGCAGACATACACATATAAATCTACTTATAATATATATACATATTCCCTGTTAAAAGAATAGACATAATATAAACATAATGGGTTTCAGCTCCTTCTAGCGATCTTTTCATTGGTAATGTAACTCATTGATATTCAGCTAAACGTATTATATAATTTGAAATAGCTAGGTTGCACCAAAAATAGTGAAGATGTTTATCTATGCTTAATGCTAATTACAGATTCCATTTGCCTCGAAAACTCGTGTTCCTTTCCTTCCAGACTGTCCACCTATTACTGACCATCCAAGTTTTCCCGTCTTTCGCAATCCTTTCAAGTGCTAGCATTGTAATTGCTCCTTTGTTGTCTTTGCCATTGTCCAAGCAACACCCAGAATGTTAAAAAAGAAGATCCAGACCTGGAAGGTGAAAGAGCAATGAAGGAAAAAAATGCTTGCCATCCTCACTTTGTTTCTGACAAAGGCAGCATCTACTGCAGATGTTTATTCCCATTTTTTCTGTAGATTCTTGTGCGTAAGGTTGGCTTCCTTGGCTACCAACCAGGCACATCAGTCAGCTCCCAGTGCTGATCTGTTTCTCTTGATGCAGTTCCAAGGCCAGTTATCAGCAACAGTGGGCTTTGGCTGCTGGTAGCAAGATTTGACAGTAAACATTCCTTTGATATTGGATTTCCACTGTGTAGTATCTGTCCACAAACTGAGAGGGATCTTATGACATTCTGAGAAGCGATGGACATCAGGACATAAGCTGTCCATTTCACAGTCATTGGTATTGTGCCTAGACTTGATGTTTCAGCCTTGTTCAATCCAATAATCTAACTAGAGAGCTTCAGAATTCCGTGCCACAGTGTACAAAGATGGTATTATTCCTTTAGGGGCCACTGGTCTAGCCAGAATCTGCGTTTTCCTGCCATCTCCAAATACTGTTGAGGTCTTGGATTGGAAGGAGTCCCAGTGTGCTCTTATGTCTCCAGATGCCGCATGTATTGTGGTTGCTCCTTAATTGAAGAGTTGCGCAATATTTGGTTACAATAACCTACCTCCATAAAATCCCATCCTCATTGTTAAATCTCCAATGCCATTTATGCTGCAAACTGGTACTTTGAGCTCTCAAGTCTTTGTTACCCAGACTTCCTGTTCTCTTTTCAGTTGCGACGGTTCCTGTTCTACCAAATTGAATGTCTTGTTTTCCTTCTTGCCTTGTCATAGGAATCTCTTTGCTATTATCCAACCTTTTTGCCACCTGAGTCGGCAGAGGAACAAAGACATAATATCAAAGAAGTCCAGTAAGATCTTAGCCTTGCTAAATCATAAAACCTGAAGCATGTTTCGAAGTCCAAAAATACTTGTGCTCCATCTTTATATAATTCCTTCAAGTCAGGTTGAATACACATTTGGATTTTCACTCAGGTGTAAGGGAGAGAACCCACATAATTAGGCTGAGTATTCTTGTCAAACTCCCATGAGAACCTTCAAATTTTCAAGCATTTCTCCCACAAGTTTTTTGTTTTTCCTTGTGCCTTTCTTATCTTTGTTATTTATTCATTCCTTTTGTCACCAGAAAAACAGGGATGAAGTGAGACAAATTTAAGTTGATAATTGATTGTTTAAAGAATTTTGTGAGTCCACAAAGTTTTCTTTATTATCTTTGCTGCTTCCTTTTATTCTGTACTGTCGGGGATGTACAATTGTTTCTCAATATCATATTATGTTTTTCTTTTAATAGCAGCTAACATGCTTAATTTCTGGCGTTCATATAGTTCATCGTGAAGAGTGGTGATGATTGCAGACAAGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACGGTAAGTATCTTGGATTCAAAGATCTTCCATTTTTATGACTTGTGTAATTATTGGCATTCTCTATAGGTTATGTTTTTTGCTATTCTATTTTGCGGTACCTTTTTGTTTTTAGATAGCTTTGGCTTTTTTGCTTCATTTTTTTTGTCTCAACGAACCGAAAGCAACTTTTGGATGAGGGGATATGTAAGGAGGATCTGATATTATATGGTGGGGGTAGGGGTAGGGGAGGGGTGGGGGTAGCTCATTATAAAATGTTCCCCAACCTCGAGTTATTGAATTGAATTTAGTAGAGTTCTAGAACTCTTCCCTTAACATGAACAGTTGTAAATAAGAGAGCATATGGGCCCAGTTGTCATGGGACTCATATCCGCTCAATCTTTTTTCGTGCTACAGCGTTTGGACTTTGGATAGGGGTTTTAACTTGATTTTGTTCATAATGTTATTATGAAGTGTGTTTAGTATCTTATGCCGAATGTTTTTTGTTGTACTTTTTTTTGCATTTGCTCTAAAATATTCAGTACAGAGACCTTAAAATTAGAAGGTTGAAATGCATTTGGATGCAGGATATTTTTGTAAAAAGAAATCAAGTTGATAAAAACTAGAACGCAAGGTAATATAGGTGATGTAGAACAGGACATAATTAATACGGTAATCTAGTAATAGAAAGAACTAATTCATAAAACAAGCGCTGGAAAGGAAATATTCTGAAAAATTTGATGACTACAAACTTTGCCTAGAGAAATGAATGAGGAATTCAAGTAAATCAAATCTTGCCACCACAAATATACAGTACTATATGATGCGTAGTACTGAAACATTTGGTTAGCAGAGCCGTATGTGTGAGTAACATTTGTTCCATAAGCAAGTGATTTTTAAAAGAGGTCAGATTATTTGAGGGCTTATCTAGCTAGGCGGTCTTTTATCATATTGAGGTTTTCTCCATTTTCTTCAAGTAACATGATGATTGCGCACTCAAAGAGTTTCAATCCCCAAAGAAAAAAATTGCTGGATGAGTTCTGCAATCTTTCTGTTTGGTGAGAAAAATTCCCAATACTTGTATTGGTGATAAGTAGTAGATATCCGCATGGAAGAGTTGAGGATGTGCACAAGTTGGTCCAAACACCACCGCTATAAGTAGCCTATTTTGAGTAGATATTCAACCTTGCCTAGAGGCCTCACGGGTTGAATTGGGATTTGGGTTGCAAGTTTTGTTCCTTCAGCAGAGATATATTACTTAATTGGTATTATTCACATAGATAATCATCATGCACATATTTTCTTATCTGGTGTAAAATATGTAAAATAATTGGCTTTATATATCCAACAAGTCTATTTTTACCAAGATTTAGGACTCACATTTATTTTTTTTGAGCTTTTTATTGGTATGAGGCATACAGTGCTCTTTTGTATATTCCTGTCTTTGCAATCTCAGTCTTTCTTTATTTGAAAAATGTTAAAATTACTCTGTAAATACAAAAGCAATGTAGAACTCTTAGTATTCTAGTGAAAATCATATTTAACTCACCTTGAACTAATGTGACAACAGAGTTGTATAAAATAAAGAATAGTATTGGAGCAGTTATACAGATAAAAATGAAACAAGACAATAATAAAATTCAGCAAATGATTTTGGTAAATACTATGGTTATTTGTCAATTACCTTAATTCATTATGGGAGTCATTTGTTCGGTATTTTTACGTCTTTACTAGCTCACAAGACGGCTTTCTTTCCCAAGATACTTCTGAAAAAAAATAGTATTTTCTACCGAAAGAGTGATCTTTTTTTCCCCATCCTCCTGCATTTGTTAGGTCTATAGCTAGGGTTTCATTCCTAGATATGCCAATGTCAGTGAGATCCATGTTTTTACTGTTGACCTTGAATATTGTTTTATGCTCTCAAGTTACTCACTCATATTGTTTGAGTATTTTGAAATGGTAGATATCTTCCAGGAAGCTGGTCTGCCGCTTTGGTTGCGTCCTTATGAAGTCTTAGTTACATCCTCTTATACTGCTTTAATTGAAAC</genome_strand>
        <mrna_strand>GAATTTTTCAGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCAGATGCTATTGATTCAGAATGGGTACGAGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAAGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTGCATTAAAAGGCGAAGCACCTCCTGGACTCCCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAG...............................................................................GTGACAAATGGTGGTCTTCCCAAGGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGNGTGGGACTTGAGATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATCGTGAAGAGTGGTGATGATTGCAGACAGGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATCTTCCAGGAAGCTGGTCTGCCGCTTTGGTTGCGTCCTTATGAAGTCTTAGTTACATCCTCTTATACTGCCCTAATTGAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E558172" ref_strand="+" ref_description="SGN-E558172 [17469]">
      <seq>atctaagggagggatcctctggcaaatggagatgttctattgccaaagcctcccccttgggcttatcctctttggacaggacaggataaccacaatgacagaatgtcaaggtctgcatctcaggccatagaccaagcaatggctcaattatgggatgctaaagtgaaatttgtgcgagtgaatttttcggtagagatgcaatcagagtctgcaatagatcattgcagccttggttctgcttcagaaagttatagtgaatgcagagaggtcccatctcttccattgaagtcagatgctattgattcagaatgggtacgggttgtcttgactgtagatcctggtgttaggatggaggatatagtggaccaagaaccaccaagaaagaaagagcatcgaagggttcccagtacagtagccatcgaggaagttaagttagctgcattaaaaggcgaagcacctcctgtgactccctttgaaaggtgctggtcaggattcatctgatgcacanactaaggtcacaaatggtggtcttcccaacgttagtgatgcactttctggagaactctgggaagtcaagaaggaaagaatacgcaaatgctctggttatgggaaattacctgggtgggacttgagatctttcatcgtgaagagtggtgatgattgcagacaggagcatcttgctgtacaacttatctcccattctacgatatctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="17233" stop="12999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16933" g_stop="16501" g_length="433"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16500" i_stop="15582" i_length="919">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15581" g_stop="15501" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="433" r_stop="514" r_length="82" r_score="0.926"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15500" i_stop="15422" i_length="79">
            <donor d_prob="0.575" d_score="0.94"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15421" g_stop="15299" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="515" r_stop="637" r_length="123" r_score="0.992"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="15298" i_stop="13372" i_length="1927">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="13371" g_stop="13302" g_length="70"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="706" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="13301" i_stop="13190" i_length="112">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.781" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="13189" g_stop="13183" g_length="7"/>
          <reference_exon_boundary r_type="cDNA" r_start="707" r_stop="713" r_length="7" r_score="0.857"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E558172" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E558172" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16933" e_stop="16501"/>
          <exon e_start="15581" e_stop="15501"/>
          <exon e_start="15421" e_stop="15299"/>
          <exon e_start="13371" e_stop="13302"/>
          <exon e_start="13189" e_stop="13183"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCTAAGGGAGGGATCCCTCTGGCAAATGGAGATGTTCTATTGCCAAAGCCTCCTCCTTGGGCTTATCCTCTTTGGACAGGACAGGACAATCACAATGACAGAATGTCAAGGTCTGCATCTCAGGCCATAGACCAAGCAATGGCTCAATTATGGGATACTAAAGTGAAATTTGTGCGAGTGAATTTTTCGGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCTGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAGGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAGGTAACCTTCATCTCTGCTGCATACGTGAACATTCTTTTACTTCATGAGATGCAGTACTGCCTTTTGGATAAGATCAAGTGTATTATCTGATCTTCGTGAATTACGTGAATGTCTTTCTTTAATCGTCTTTTCATTAATTCTTATGGTCTAGCATCTATATGACCAATTGTCCTTCATATCTATGCTTCAAGACATCAAAGATGTATGTCTAAGTCACCGGGACATTTATTTGTTATATCTGGATATGCTGCTGTTTTGAACTATTAGGAGGGGATCAGGTGAACATCCAGTTATCCACCCCCATCAGTTTTGGTAGTAGGATCACACTGCTAAGCAGTTGCATTTTCTTAGAAATCTAAGGTTAGTGGAGAAAGATAATGGATAATATGGTGCTTGTTGGGAGCCATTAGGTAAGGATAAACCACGCCCCCAAAATCACAGAGCTTGAAGTTCTGATCCATCGTTGCAAATTTTTGTTAGTTTTAGTTGCTCCGGTGAGAACTGAAACTGGATTTTTTATGAAATTGAGGAGCTTTTTATGTTGAATTTATTAGTTTAACATTATCTTCTTCTATGCTGTTTTCTAGTGGAGATATTAATGTCACTGAGTGCTGTATGAGCGGATTTTAGGTGTTGATTCACTGTTATTCTTTGTCAAACAAAAGATAGGTCATAATCTTATGTCATGTTAAGCATCTTGTTACTCATTGAGTTTGAGATCTCATGTGATGTCTACTAACTCCCTCGCGGGATTTTCTTTTGAAAGATGATTACCGTTGTTTGTTTGATATTTTCATCTTTTGGGAGAATTGTTGCTCTATAAATATCACCATTCGTGATTATTTTGTTCATGAGTCCTACTTGTTCCTTTGATACTTCTCCATACATGAAGAAATCACAAACATGGTTCTCTTTACAGTTAGCTGCATTAAAAGGAGAAGCACCTCCTG-GACTACCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAGGTAGAGACGTTGTCAGATGTTGTTCCTCTTCTTAATAGAACCTATAATTACACGTGCATGATAATCTCATTGAAAACAGGTCACAAATGGTGGTCTTCCCAATGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCTGTGAGTCCCACCATCTAATTTTTGTTGTTGTTTCCTTGATATTTTCTTCGTAATTTTTGATAAGTTAGTATGACATGTCTGCTTGCCTTATGTATAAAGAGAGGTTGATCTTTGGTCAAATTGCTAGCTTCTCTACTTGATGCTCGTAATTGGCTGCCAATGATTAGGACATGCAGACATACACATATAAATCTACTTATAATATATATACATATTCCCTGTTAAAAGAATAGACATAATATAAACATAATGGGTTTCAGCTCCTTCTAGCGATCTTTTCATTGGTAATGTAACTCATTGATATTCAGCTAAACGTATTATATAATTTGAAATAGCTAGGTTGCACCAAAAATAGTGAAGATGTTTATCTATGCTTAATGCTAATTACAGATTCCATTTGCCTCGAAAACTCGTGTTCCTTTCCTTCCAGACTGTCCACCTATTACTGACCATCCAAGTTTTCCCGTCTTTCGCAATCCTTTCAAGTGCTAGCATTGTAATTGCTCCTTTGTTGTCTTTGCCATTGTCCAAGCAACACCCAGAATGTTAAAAAAGAAGATCCAGACCTGGAAGGTGAAAGAGCAATGAAGGAAAAAAATGCTTGCCATCCTCACTTTGTTTCTGACAAAGGCAGCATCTACTGCAGATGTTTATTCCCATTTTTTCTGTAGATTCTTGTGCGTAAGGTTGGCTTCCTTGGCTACCAACCAGGCACATCAGTCAGCTCCCAGTGCTGATCTGTTTCTCTTGATGCAGTTCCAAGGCCAGTTATCAGCAACAGTGGGCTTTGGCTGCTGGTAGCAAGATTTGACAGTAAACATTCCTTTGATATTGGATTTCCACTGTGTAGTATCTGTCCACAAACTGAGAGGGATCTTATGACATTCTGAGAAGCGATGGACATCAGGACATAAGCTGTCCATTTCACAGTCATTGGTATTGTGCCTAGACTTGATGTTTCAGCCTTGTTCAATCCAATAATCTAACTAGAGAGCTTCAGAATTCCGTGCCACAGTGTACAAAGATGGTATTATTCCTTTAGGGGCCACTGGTCTAGCCAGAATCTGCGTTTTCCTGCCATCTCCAAATACTGTTGAGGTCTTGGATTGGAAGGAGTCCCAGTGTGCTCTTATGTCTCCAGATGCCGCATGTATTGTGGTTGCTCCTTAATTGAAGAGTTGCGCAATATTTGGTTACAATAACCTACCTCCATAAAATCCCATCCTCATTGTTAAATCTCCAATGCCATTTATGCTGCAAACTGGTACTTTGAGCTCTCAAGTCTTTGTTACCCAGACTTCCTGTTCTCTTTTCAGTTGCGACGGTTCCTGTTCTACCAAATTGAATGTCTTGTTTTCCTTCTTGCCTTGTCATAGGAATCTCTTTGCTATTATCCAACCTTTTTGCCACCTGAGTCGGCAGAGGAACAAAGACATAATATCAAAGAAGTCCAGTAAGATCTTAGCCTTGCTAAATCATAAAACCTGAAGCATGTTTCGAAGTCCAAAAATACTTGTGCTCCATCTTTATATAATTCCTTCAAGTCAGGTTGAATACACATTTGGATTTTCACTCAGGTGTAAGGGAGAGAACCCACATAATTAGGCTGAGTATTCTTGTCAAACTCCCATGAGAACCTTCAAATTTTCAAGCATTTCTCCCACAAGTTTTTTGTTTTTCCTTGTGCCTTTCTTATCTTTGTTATTTATTCATTCCTTTTGTCACCAGAAAAACAGGGATGAAGTGAGACAAATTTAAGTTGATAATTGATTGTTTAAAGAATTTTGTGAGTCCACAAAGTTTTCTTTATTATCTTTGCTGCTTCCTTTTATTCTGTACTGTCGGGGATGTACAATTGTTTCTCAATATCATATTATGTTTTTCTTTTAATAGCAGCTAACATGCTTAATTTCTGGCGTTCATATAGTTCATCGTGAAGAGTGGTGATGATTGCAGACAAGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACGGTAAGTATCTTGGATTCAAAGATCTTCCATTTTTATGACTTGTGTAATTATTGGCATTCTCTATAGGTTATGTTTTTTGCTATTCTATTTTGCGGTACCTTTTTGTTTTTAGATAGCTT</genome_strand>
        <mrna_strand>ATCTAAGGGAGGGATCC-TCTGGCAAATGGAGATGTTCTATTGCCAAAGCCTCCCCCTTGGGCTTATCCTCTTTGGACAGGACAGGATAACCACAATGACAGAATGTCAAGGTCTGCATCTCAGGCCATAGACCAAGCAATGGCTCAATTATGGGATGCTAAAGTGAAATTTGTGCGAGTGAATTTTTCGGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTGAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCAGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAAGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTGCATTAAAAGGCGAAGCACCTCCTGTGACTCCCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACANACTAAG...............................................................................GTCACAAATGGTGGTCTTCCCAACGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCT.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTCATCGTGAAGAGTGGTGATGATTGCAGACAGGAGCATCTTGCTGTACAACTTATCTCCCA-TTCTACG................................................................................................................ATATCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E438156" ref_strand="+" ref_description="SGN-E438156 [cSTA-6-I10]">
      <seq>gaatttttcagtagagatgcaatcagagtctgcaatagatcattgcagccttggttctgcttcagaaagttatagtaaatgcagagaggtcccatctcttccattgaagtcagatgctattgattcagaatgggtacgagttgtcttgactgtagatcctggtgttaggatggaggatatagtggaccaagaaccaccaagaaagaaagagcatcgaagggttcccagtacagtagccatcgaggaagttaagttagctgcattaaaaggcgaagcacctcctggactccctttgaaaggtgctggtcaggattcatctgatgcacaacctaaggtgacaaatggtggtcttcccaaggttagtgatgcactttctggagaactctgggaagtcaagaaggaaagaatacgcaaatgctctggttatgggaaattacctgggtgggacttgagatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="17053" stop="14999"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16753" g_stop="16501" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="16500" i_stop="15582" i_length="919">
            <donor d_prob="0.912" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="15581" g_stop="15501" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="334" r_length="81" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="15500" i_stop="15422" i_length="79">
            <donor d_prob="0.575" d_score="0.98"/>
            <acceptor a_prob="0.994" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="15421" g_stop="15299" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="335" r_stop="457" r_length="123" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E438156" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>457</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E438156" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16753" e_stop="16501"/>
          <exon e_start="15581" e_stop="15501"/>
          <exon e_start="15421" e_stop="15299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAATTTTTCGGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCTGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAGGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAGGTAACCTTCATCTCTGCTGCATACGTGAACATTCTTTTACTTCATGAGATGCAGTACTGCCTTTTGGATAAGATCAAGTGTATTATCTGATCTTCGTGAATTACGTGAATGTCTTTCTTTAATCGTCTTTTCATTAATTCTTATGGTCTAGCATCTATATGACCAATTGTCCTTCATATCTATGCTTCAAGACATCAAAGATGTATGTCTAAGTCACCGGGACATTTATTTGTTATATCTGGATATGCTGCTGTTTTGAACTATTAGGAGGGGATCAGGTGAACATCCAGTTATCCACCCCCATCAGTTTTGGTAGTAGGATCACACTGCTAAGCAGTTGCATTTTCTTAGAAATCTAAGGTTAGTGGAGAAAGATAATGGATAATATGGTGCTTGTTGGGAGCCATTAGGTAAGGATAAACCACGCCCCCAAAATCACAGAGCTTGAAGTTCTGATCCATCGTTGCAAATTTTTGTTAGTTTTAGTTGCTCCGGTGAGAACTGAAACTGGATTTTTTATGAAATTGAGGAGCTTTTTATGTTGAATTTATTAGTTTAACATTATCTTCTTCTATGCTGTTTTCTAGTGGAGATATTAATGTCACTGAGTGCTGTATGAGCGGATTTTAGGTGTTGATTCACTGTTATTCTTTGTCAAACAAAAGATAGGTCATAATCTTATGTCATGTTAAGCATCTTGTTACTCATTGAGTTTGAGATCTCATGTGATGTCTACTAACTCCCTCGCGGGATTTTCTTTTGAAAGATGATTACCGTTGTTTGTTTGATATTTTCATCTTTTGGGAGAATTGTTGCTCTATAAATATCACCATTCGTGATTATTTTGTTCATGAGTCCTACTTGTTCCTTTGATACTTCTCCATACATGAAGAAATCACAAACATGGTTCTCTTTACAGTTAGCTGCATTAAAAGGAGAAGCACCTCCTGGACTACCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAGGTAGAGACGTTGTCAGATGTTGTTCCTCTTCTTAATAGAACCTATAATTACACGTGCATGATAATCTCATTGAAAACAGGTCACAAATGGTGGTCTTCCCAATGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCT</genome_strand>
        <mrna_strand>GAATTTTTCAGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCAGATGCTATTGATTCAGAATGGGTACGAGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAAGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTAGCTGCATTAAAAGGCGAAGCACCTCCTGGACTCCCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAG...............................................................................GTGACAAATGGTGGTCTTCCCAAGGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E315713" ref_strand="+" ref_description="SGN-E315713 [cTOA-26-K1]">
      <seq>cgaaacgaagccaaagcttgcagtataagattgaaatttgggaattgtgaatttggataaaccctagattggaatcgatagattctctatccatttacgtaaaattcaagctcaatttctacagtaacgcccaaattcactgcattttctctctcatcccctataaactcgatgcaatttcgcaggttctacacctctctagcgaattctaaccgcaacccatttctcctatatcgaaatctcacaaacccttttgctgttttcgaccctaacccacagtttctctctacacaaagaatcttgaaaaactgggttcaaaggccaattcgtgtgtcgaaacgttttgtctcatcatttcctgctatggcagaaggaagaagacccactcatgtgcctataccacccccagaaactgctgataaggcggaattgtatcgagcacttgaggctgcggtggggtcgcagtttagttcagagccattggcaccggagcctcatcctttgattattgtggttagtggtccaagtggggttggtaaagatgctgtgattaaaaggcttagagaagttagggagaatattcattttgttgttactgcaacgacaagggggaaaaggccgggtgaggttgatggaaaagatacttttttacgagtaaagaagagtttttgtcaatgattg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="27991" stop="29272"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28291" g_stop="28972" g_length="682"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="681" r_length="681" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E315713" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E315713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28291" e_stop="28972"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAACGAAGCCAAAGCTTGCAGTATAAGATTGAAATTTGGGAATTGTGAATTTGGATAAACCCTAGATTGGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTTTTTTACGAGTAAAGAAGAGTTTTTGTCAATGATTG</genome_strand>
        <mrna_strand>CGAAACGAAGCCAAAGCTTGCAGTATAAGATTGAAATTTGGGAATTGTGAATTTGGATAAACCCTAGATTGGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGA-TACTTTTTTACGAGTAAAGAAGAGTTTTTGTCAATGATTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E326621" ref_strand="+" ref_description="SGN-E326621 [cTOC-17-M13]">
      <seq>cgaaacgaagccaaagcttgcagtataagattgaaatttgggaattgtgaatttggataaaccctagattggaatcgatagattctctatccatttacgtaaaattcaagctcaatttctacagtaacgcccaaattcactgcattttctctctcatcccctataaactcgatgcaatttcgcaggttctacacctctctagcgaattctaaccgcaacccatttctcctatatcgaaatctcacaaacccttttgctgttttcgaccctaacccacagtttctctctacacaaagaatcttgaaaaactgggttcaaaggccaattcgtgtgtcgaaacgttttgtctcatcatttcctgctatggcagaaggaagaagacccactcatgtgcctataccacccccagaaactgctgataaggcggaattgtatcgagcacttgaggctgcggtggggtcgcagtttagttcagagccattggcaccggagcctcatcctttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="27991" stop="29095"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28291" g_stop="28795" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E326621" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326621" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28291" e_stop="28795"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAACGAAGCCAAAGCTTGCAGTATAAGATTGAAATTTGGGAATTGTGAATTTGGATAAACCCTAGATTGGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGA</genome_strand>
        <mrna_strand>CGAAACGAAGCCAAAGCTTGCAGTATAAGATTGAAATTTGGGAATTGTGAATTTGGATAAACCCTAGATTGGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E576405" ref_strand="+" ref_description="SGN-E576405 [59617]">
      <seq>ctagaatcgaaagattctctatccatttatgtaaaattgaagctcaatttctacagttacgcccaaattcactgcattttctctctcatctcctataaactcgatgcaatttcgcaggttctacacctctctagcaaattctaatcgcaacccatttctcctttatcgaaatatcacaaacccttttgctgttttcgaccccaacccacaatttctctctacacaaagaatcttgaaaaaccgggttcaaaggccaatttgtgtgtccaaacgttttgtctcatcatttcctgccatggcagaaggaagaagacccacccatgtgcctataccacccccagaaactgctgataaggcggaattgtatcgagcccttgaggctgcggtggggtcgcagtttagttcagagccattggcaccagatcctcatcctttgattattgtggttagtggtccaagtggggttggtaaagatgctgtgatcaaaaggcttagagaagttagggagaatattcattttgttgtgactgcgacgactagggggaaaaggccgggtgaggttgatggaaaagattacttttttacgagtaacagaagagttttta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="28060" stop="29261"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28359" g_stop="28962" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="605" r_length="605" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E576405" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E576405" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28359" e_stop="28962"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTTTTTTACGAGTAA-AGAAGAGTTTTTG</genome_strand>
        <mrna_strand>CTAGAATCGAAAGATTCTCTATCCATTTATGTAAAATTGAAGCTCAATTTCTACAGTTACGCCCAAATTCACTGCATTTTCTCTCTCATCTCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCAAATTCTAATCGCAACCCATTTCTCCTTTATCGAAATATCACAAACCCTTTTGCTGTTTTCGACCCCAACCCACAATTTCTCTCTACACAAAGAATCTTGAAAAACCGGGTTCAAAGGCCAATTTGTGTGTCCAAACGTTTTGTCTCATCATTTCCTGCCATGGCAGAAGGAAGAAGACCCACCCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCCCTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCAGATCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATCAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTGACTGCGACGACTAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTTTTTTACGAGTAACAGAAGAGTTTTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E482590" ref_strand="+" ref_description="SGN-E482590 [cSTE-1-A9]">
      <seq>tacaatcgaaagattctctatccatttatgtaaaattgaagctcaatttctaccagttacgcccaaattcactgcattttctctctcatctcctataaactcgatgcaatttcacaggttctacacctctctagcaaattctaatcgcaacccatttctcctttatcgaaatatcgcaaacccttttgctgttttcgaccccaacccacaatttctctctacacaaagaatcttgaaaaaccgggttcaaaggccaatttgtgtgtccaaacgttttgtctcatcatttcctgccatggcagaaggaagaagacccacccatgtgcctataccacccccagaaactgctgataaggcggaattgtatcgagcccttgaggctgcggtggcgtcgcagtttagttcagagccattggcaccagatcctcatcctttgattattgtggttagtggtccaagtggggttggtaaagatgctgtgatcaaaaggcttanagaagttagggagaatattcattttgttgtgactgcgacgactanggggaaaaggcccggtgaggttgatggaaaagattactt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="28063" stop="29237"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28360" g_stop="28937" g_length="578"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="579" r_length="579" r_score="0.943"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E482590" ref_strand="+">
        <total_alignment_score>0.943</total_alignment_score>
        <cumulative_length_of_scored_exons>578</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E482590" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28360" e_stop="28937"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTA-CAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTT</genome_strand>
        <mrna_strand>TACAATCGAAAGATTCTCTATCCATTTATGTAAAATTGAAGCTCAATTTCTACCAGTTACGCCCAAATTCACTGCATTTTCTCTCTCATCTCCTATAAACTCGATGCAATTTCACAGGTTCTACACCTCTCTAGCAAATTCTAATCGCAACCCATTTCTCCTTTATCGAAATATCGCAAACCCTTTTGCTGTTTTCGACCCCAACCCACAATTTCTCTCTACACAAAGAATCTTGAAAAACCGGGTTCAAAGGCCAATTTGTGTGTCCAAACGTTTTGTCTCATCATTTCCTGCCATGGCAGAAGGAAGAAGACCCACCCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCCCTTGAGGCTGCGGTGGCGTCGCAGTTTAGTTCAGAGCCATTGGCACCAGATCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATCAAAAGGCTTANAGAAGTTAGGGAGAATATTCATTTTGTTGTGACTGCGACGACTANGGGGAAAAGGCCCGGTGAGGTTGATGGAAAAGATTACTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E414254" ref_strand="+" ref_description="SGN-E414254 [STM-19-O23]">
      <seq>ggaatcgaaagattctctatccatttacgtaaaattcaagctcaatttctacagtaacgccccaaattcactgcattttctctctcattcccctataaactcgatgcaatttcgcaggttctacacctctctagcaaattctaatcgcaacccatttctcctttatcgaaatttcacaaacccttttgctgttttcgaccccaacccacaatttctctctacacaaagaatcttgaaatactgggttcaaaggccaatttgtgtgtccaaacgttttgtctcatcatttcctgctatggcagaaggaagaagacctacccatgtgcctataccacccccagaaactgctgataaggcggaattgtatcgagctcttgaggctgcggtggggtcgcagtttagttcagagccattggcaccggagcctcatcctttgattattgtggttagtggtccaagtggggttggtaaagatgctgtgatcaaaaggcttagagaagttanggagaatattcattttgttgtgactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="28061" stop="29188"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28361" g_stop="28888" g_length="528"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E414254" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>528</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E414254" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28361" e_stop="28888"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACG-CCCAAATTCACTGCATTTTCTCTCTCA-TCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTG</genome_strand>
        <mrna_strand>GGAATCGAAAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCCAAATTCACTGCATTTTCTCTCTCATTCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCAAATTCTAATCGCAACCCATTTCTCCTTTATCGAAATTTCACAAACCCTTTTGCTGTTTTCGACCCCAACCCACAATTTCTCTCTACACAAAGAATCTTGAAATACTGGGTTCAAAGGCCAATTTGTGTGTCCAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCTACCCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCTCTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATCAAAAGGCTTAGAGAAGTTANGGAGAATATTCATTTTGTTGTGACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E473535" ref_strand="+" ref_description="SGN-E473535 [cSTB-32-P9]">
      <seq>ggaatcgaaagattctctatccatttacgtaaaattcaagctcaatttctacagtaacgcccaaattcactgcattttctctctcatcccctataaactcgatgcaatttcgcaggttctacacctctctagcaaattctaatcgcaacccatttctcctttatcgaaatttcacaaacccttttgctgttttcgaccccaacccacaatttctctctacacaaagaatcttgaaatactgggttcaaaggccaatttgtgtgtccaaacgttttgtctcatcatttcctgctatggcagaaggaagaagacctacccatgtgcctataccacccccagaaactgctgataaggcggaattgtatcgagctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="28061" stop="29033"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28361" g_stop="28733" g_length="373"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="373" r_length="373" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E473535" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>373</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E473535" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28361" e_stop="28733"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACT</genome_strand>
        <mrna_strand>GGAATCGAAAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCAAATTCTAATCGCAACCCATTTCTCCTTTATCGAAATTTCACAAACCCTTTTGCTGTTTTCGACCCCAACCCACAATTTCTCTCTACACAAAGAATCTTGAAATACTGGGTTCAAAGGCCAATTTGTGTGTCCAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCTACCCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E327317" ref_strand="+" ref_description="SGN-E327317 [cTOC-19-D8]">
      <seq>tttctcctatatcgaaatctcacaaacccttttgctgttttcgaccctaacccacagtttctctctacacaaagaatcttgaaaaactgggttcaaaggccaattcgtgtgtcgaaacgttttgtctcatcatttcctgctatggcagaaggaagaagacccactcatgtgcctataccacccccagaaactgctgataaggcagaattgtatcgagcacttgaggctgcagtggggtcgcagtttaattcagagccattggcaccggagcctcatcctttgattattgtggatagtggtccaagtggggttggtaaagatgctgtgattaaaaggcttagagaagttagggagaatattcattttgttgttactgcaacgacaagggggaaaaggccgggtgaggttgatggaaaagattacttttttacgagtaaagaagagtttttgtcaatgattgagagacatgagttgttggagtatgcattggtgtatggggattataatggtataccaaagcaacaaattagggatcatatggctaaaggattggatattgtgttgagagttgatatacaacgtgcagcaacactgatgacgattttgagaaattctgcagtgtatgtgttcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="28213" stop="29445"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28513" g_stop="29145" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="633" r_length="633" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E327317" ref_strand="+">
        <total_alignment_score>0.986</total_alignment_score>
        <cumulative_length_of_scored_exons>633</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E327317" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28513" e_stop="29145"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTTTTTTACGAGTAAAGAAGAGTTTTTGTCAATGATTGAGAGACATGAGTTGTTGGAGTATGCATTGGTGTATGGGGATTATAAGGGTATACCAAAGCAACAAATTAGGGATCATATGGCTAAAGGATTGGATATTGTGTTGAGAGTTGATATACAAGGTGCAGCAACACTGAGGAGGATTTTGAGAAATTCTGCAGTGTTTGTGTTCTTG</genome_strand>
        <mrna_strand>TTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCAGAATTGTATCGAGCACTTGAGGCTGCAGTGGGGTCGCAGTTTAATTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGATAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTTTTTTACGAGTAAAGAAGAGTTTTTGTCAATGATTGAGAGACATGAGTTGTTGGAGTATGCATTGGTGTATGGGGATTATAATGGTATACCAAAGCAACAAATTAGGGATCATATGGCTAAAGGATTGGATATTGTGTTGAGAGTTGATATACAACGTGCAGCAACACTGATGACGATTTTGAGAAATTCTGCAGTGTATGTGTTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E348508" ref_strand="+" ref_description="SGN-E348508 [cTOF-30-D17]">
      <seq>tttctctctacacaaagaatcttgaaaaactgggttcaaaggccaattcgtgtgtcgaaacgttttgtctcatcatttcctgctatggcagaaggaagaagacccactcatgtgcctataccacccccagaaactgctgataaggcggaattgtatcgagcacttgaggctgcggtggggtcgcagtttagttcagagccattggcaccggagcctcatcctttgattattgtggttagtggtccaagtggggttggtaaagatgctgtgattaaaaggcttagagaagttagggagaatattcattttgttgttactgcaacgacaagggggaaaaggccgggtgaggttgatggaaaagattacttttttacgagtaaagaagagtttttgtcaatgattgagagacatgagttgttggagtatgcattggtgtatggggattataagggtataccaaagcaacaaattagggatcatatggctaaaggattggatattgtgttgagagttgatatacaaggtgcagcaacactgaggaggattttgagaaattctgcagtgtttgtgttcttggtggcggagagtgaagatgcattggttaagaggttgattgataggaagactgagactaaagagactttgctagtgagaattgcaacgtctcgaaaggaagtgaggcattggggggaagttgattatgntggtagtgaatagagaaggagagttggagaattctgttaagttaatggagtctattattgatgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="28270" stop="29638"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28570" g_stop="29338" g_length="769"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="770" r_length="770" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E348508" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>769</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E348508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28570" e_stop="29338"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTTTTTTACGAGTAAAGAAGAGTTTTTGTCAATGATTGAGAGACATGAGTTGTTGGAGTATGCATTGGTGTATGGGGATTATAAGGGTATACCAAAGCAACAAATTAGGGATCATATGGCTAAAGGATTGGATATTGTGTTGAGAGTTGATATACAAGGTGCAGCAACACTGAGGAGGATTTTGAGAAATTCTGCAGTGTTTGTGTTCTTGGTGGCGGAGAGTGAAGATGCATTGGTTAAGAGGTTGATTGATAGGAAGACTGAGACTAAAGAGACTTTGCTAGTGAGAATTGCAACGTCTCGAGAGGAAGTGAGGCATATGGGGGAGTTTGATTATG-TGGTAGTGAATAGAGAAGGAGAGTTGGAGAATTCTGTTAAGTTAATGGAGTCTATTATTGATGCTG</genome_strand>
        <mrna_strand>TTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTTTTTTACGAGTAAAGAAGAGTTTTTGTCAATGATTGAGAGACATGAGTTGTTGGAGTATGCATTGGTGTATGGGGATTATAAGGGTATACCAAAGCAACAAATTAGGGATCATATGGCTAAAGGATTGGATATTGTGTTGAGAGTTGATATACAAGGTGCAGCAACACTGAGGAGGATTTTGAGAAATTCTGCAGTGTTTGTGTTCTTGGTGGCGGAGAGTGAAGATGCATTGGTTAAGAGGTTGATTGATAGGAAGACTGAGACTAAAGAGACTTTGCTAGTGAGAATTGCAACGTCTCGAAAGGAAGTGAGGCATTGGGGGGAAGTTGATTATGNTGGTAGTGAATAGAGAAGGAGAGTTGGAGAATTCTGTTAAGTTAATGGAGTCTATTATTGATGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E414255" ref_strand="+" ref_description="SGN-E414255 [STM-19-O23]">
      <seq>cattcaaaaaggggctcgatcaaaggcaagtactaacatttcgtctactttaaccaaccaagagattgacacggttaacacaagtatgaaacccaattttgcataaatagaatacaagaaaacattaagagtattagctcaacttaatcaaaagagatcaaaaaactggaaaacagacgctctctaaatcgtcactgttctttgcctcactttagctttctcagcatcaataatagactccaccaacttaacagaattctctaactccccttctctattcactaccacataatcaaactcccccatatgcctaacttcctctcgggacgtggcaattctcactagcaaagtctctttagtctcagtcttcctatcaatcaacctcttaaccagtgcatcttcactctccgccaccaagaacacaaacactgcagaatttctcaaaatcctcctcagtgttgctgcaccttgtatatcaactctcaacactatatccaatcctttagccatatgatccctaatttgttgctttggtatacccttataatccccatacaccaatgcatactccaacaactcatgtctctcaatcattgataaaaactcttctttactcttaaaaaagtaatcttttccatcaacct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="29847" stop="28616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29558" g_stop="28916" g_length="643"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="644" r_length="644" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E414255" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E414255" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29558" e_stop="28916"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAACAACTATGTCATCGATCAAAGGCAAGAAGTAACATCTCATCTACTTTAACCAACCAAGAGCTCGACACGGTTAACACAAGTAGGAAAAACAATGTTGCATAAATTGAATACAAGACAACATTAAGAGTATCAGCTCAACTTAATCAAAAACAGATCAAAAAACTGAAAAACAGA--CTCTCTAAATTGTCACTGTTCTTTGCCTCACTTTAGCTTTCTCAGCATCAATAATAGACTCCATTAACTTAACAGAATTCTCCAACTCTCCTTCTCTATTCACTACCACATAATCAAACTCCCCCATATGCCTCACTTCCTCTCGAGACGTTGCAATTCTCACTAGCAAAGTCTCTTTAGTCTCAGTCTTCCTATCAATCAACCTCTTAACCAATGCATCTTCACTCTCCGCCACCAAGAACACAAACACTGCAGAATTTCTCAAAATCCTCCTCAGTGTTGCTGCACCTTGTATATCAACTCTCAACACAATATCCAATCCTTTAGCCATATGATCCCTAATTTGTTGCTTTGGTATACCCTTATAATCCCCATACACCAATGCATACTCCAACAACTCATGTCTCTCAATCATTGACAAAAACTCTTCTTTACTCGTAAAAAAGTAATCTTTTCCATCAACCT</genome_strand>
        <mrna_strand>CATTCAAAAAGGGGCTCGATCAAAGGCAAGTACTAACATTTCGTCTACTTTAACCAACCAAGAGATTGACACGGTTAACACAAGTATGAAACCCAATTTTGCATAAATAGAATACAAGAAAACATTAAGAGTATTAGCTCAACTTAATC-AAAAGAGATCAAAAAACTGGAAAACAGACGCTCTCTAAATCGTCACTGTTCTTTGCCTCACTTTAGCTTTCTCAGCATCAATAATAGACTCCACCAACTTAACAGAATTCTCTAACTCCCCTTCTCTATTCACTACCACATAATCAAACTCCCCCATATGCCTAACTTCCTCTCGGGACGTGGCAATTCTCACTAGCAAAGTCTCTTTAGTCTCAGTCTTCCTATCAATCAACCTCTTAACCAGTGCATCTTCACTCTCCGCCACCAAGAACACAAACACTGCAGAATTTCTCAAAATCCTCCTCAGTGTTGCTGCACCTTGTATATCAACTCTCAACACTATATCCAATCCTTTAGCCATATGATCCCTAATTTGTTGCTTTGGTATACCCTTATAATCCCCATACACCAATGCATACTCCAACAACTCATGTCTCTCAATCATTGATAAAAACTCTTCTTTACTCTTAAAAAAGTAATCTTTTCCATCAACCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E227435" ref_strand="-" ref_description="SGN-E227435 [cLEL-30-P13]">
      <seq>gtttgtgttcttggtggcggagagtgaaaatgcattggttaagaggttgattgataggaagactgagactaaagagactttgctagtgagaattgcaacgtctcgagaggaagtgaggcatatgggggagtttgattatgtggtagtgaataaagaaggagagttggagaattctgttaagttaatggagtctattattgatgctgagaaagctaaagtgaggcaaagaacagtgacaatttagagagtctgtttttcagttttttgatctgtttttgattaagttgagctgatactcttaatgttgtcttgtattcaatttatgcaacattgtttttcctaaaccaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="28833" stop="29774"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29133" g_stop="29474" g_length="342"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="342" r_length="342" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="347" polyA_stop="364"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E227435" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>342</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E227435" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="29133" e_stop="29474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTGTGTTCTTGGTGGCGGAGAGTGAAGATGCATTGGTTAAGAGGTTGATTGATAGGAAGACTGAGACTAAAGAGACTTTGCTAGTGAGAATTGCAACGTCTCGAGAGGAAGTGAGGCATATGGGGGAGTTTGATTATGTGGTAGTGAATAGAGAAGGAGAGTTGGAGAATTCTGTTAAGTTAATGGAGTCTATTATTGATGCTGAGAAAGCTAAAGTGAGGCAAAGAACAGTGACAATTTAGAGAGTCTGTTTTTCAGTTTTTTGATCTGTTTTTGATTAAGTTGAGCTGATACTCTTAATGTTGTCTTGTATTCAATTTATGCAACATTGTTTTTCCTA</genome_strand>
        <mrna_strand>GTTTGTGTTCTTGGTGGCGGAGAGTGAAAATGCATTGGTTAAGAGGTTGATTGATAGGAAGACTGAGACTAAAGAGACTTTGCTAGTGAGAATTGCAACGTCTCGAGAGGAAGTGAGGCATATGGGGGAGTTTGATTATGTGGTAGTGAATAAAGAAGGAGAGTTGGAGAATTCTGTTAAGTTAATGGAGTCTATTATTGATGCTGAGAAAGCTAAAGTGAGGCAAAGAACAGTGACAATTTAGAGAGTCTGTTTTTCAGTTTTTTGATCTGTTTTTGATTAAGTTGAGCTGATACTCTTAATGTTGTCTTGTATTCAATTTATGCAACATTGTTTTTCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E733394" ref_strand="+" ref_description="SGN-E733394 [LB04DC02]">
      <seq>cggtagaagaaagagtttactccaatggcgtctggatggggaattacagggaataaaggacgatgctatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtacttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatggttttatcaactaaaagacattgaagtaaactgtatgtggttttgaattttgaaataaagaattctatcagttgcatttgatgtgagttgcatcattgaaatgactcagttcagtttctttctcnnaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33813" stop="38896"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34112" g_stop="34285" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.989"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38596" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="428" r_length="254" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="431" polyA_stop="467"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E733394" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>428</cumulative_length_of_scored_exons>
        <coverage percentage="0.916" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E733394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34112" e_stop="34285"/>
          <exon e_start="38343" e_stop="38596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGAAGAAAGAGTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTC</genome_strand>
        <mrna_strand>CGGTAGAAGAAAGAGTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E308770" ref_strand="+" ref_description="SGN-E308770 [cLEZ-11-M10]">
      <seq>gaagaagaaagagtttactccaatggcgtctggatggggaattacagggaataaaggacgatgctatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtacttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgttgatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatgggtttatcaactaaaagacattgaagtaaactgcatgtggttttgaattttgaaataaagaattctatcagttgcatttgatgtgagtcgcatcattgaaatgactcanttcagtttctttctcatatggcctggccttcgttatgtgggtgataaagaacatatattttaagggcacatttacttcttaccattggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33814" stop="38970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34114" g_stop="34285" g_length="172"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="172" r_length="172" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38670" g_length="328"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="500" r_length="328" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E308770" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>500</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E308770" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34114" e_stop="34285"/>
          <exon e_start="38343" e_stop="38670"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAGAAAGAGTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTACCATTGGC</genome_strand>
        <mrna_strand>GAAGAAGAAAGAGTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTTGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGGTTTATCAACTAAAAGACATTGAAGTAAACTGCATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTCGCATCATTGAAATGACTCANTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTATGTGGGTGATAAAGAACATATATTTTAAGGGCACATTTACTTCTTACCATTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E715962" ref_strand="+" ref_description="SGN-E715962 [FB15DA04]">
      <seq>gatagaaagagtttactccaatggcgtctggatggggaattacagggaataaaggacgatgctatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtacttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatggttttatcaactaaaagacattgaagtaaactgtatgtggttttgaattttgaaataaagaattctatcagttgcatttgatgtgagttgcatcattgaaatgactcagttcagtttctttctcatatggcctggccttcgttttgttggtgataaggaacatatgttttaagggcacatttacttcttaccattggcactagacctatgatatcagttctttctttgaaatctgtgactcttacgtgtaatatgaaattcgcgatgggaagcctgcatcatgatgaaaagagctaggattttgctaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33817" stop="39081"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34117" g_stop="34285" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38782" g_length="440"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="610" r_length="440" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E715962" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E715962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34117" e_stop="34285"/>
          <exon e_start="38343" e_stop="38782"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GA-AGAAAGAGTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTACCATTGGCACTAGACCTATGATATCAGTTCTTTCTTTGAAATCTGTGACTCTTACGTGTAATATGAAATTCGCGATGGGAAGCCTGCATCATGATGAAAAGAGCTAGGATTTTGCTAAAT</genome_strand>
        <mrna_strand>GATAGAAAGAGTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTACCATTGGCACTAGACCTATGATATCAGTTCTTTCTTTGAAATCTGTGACTCTTACGTGTAATATGAAATTCGCGATGGGAAGCCTGCATCATGATGAAAAGAGCTAGGATTTTGCTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E618993" ref_strand="+" ref_description="SGN-E618993 [69677]">
      <seq>gaagaaagagttttctccaatggcgtctggatggggaattacatggaaacaaagggcgatgttatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtccttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccagttgagagctgcttcacaaaagaaaaaggagggtgtagacggtggtggtggtggtcatcactgacctttattcttgatcaaatcatggttttatcaaccaaaagacattgaagtaaactgtatgtcgttttgaatttttgaaataaagaattaaatcagttgcatttgatgtgagctgcatcattgaaatgactcggttcagtttctttctcatatagcctttgttttgttggtgatatgcaacatatgtttgaagggcacatttacttcttaccaaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33817" stop="38965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34117" g_stop="34285" g_length="169"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="170" r_length="170" r_score="0.953"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38672" g_length="330"/>
          <reference_exon_boundary r_type="cDNA" r_start="171" r_stop="494" r_length="324" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E618993" ref_strand="+">
        <total_alignment_score>0.924</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E618993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34117" e_stop="34285"/>
          <exon e_start="38343" e_stop="38672"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGAAAGAGTTTACTCCAATGGCGTCTGGATGGGGAATTACA-GGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATC-AATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAA-TTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTACCATTGGCAC</genome_strand>
        <mrna_strand>GAAGAAAGAGTTTTCTCCAATGGCGTCTGGATGGGGAATTACATGGAAACAAAGGGCGATGTTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTCCTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAGTTGAGAGCTGCTTCACAAAAGAAAAAGGAGGGTGTAGACGGTGGTGGTGGTGGTCATCACTGACC--T-TTATTCTTGATCAAATCATGGTTTTATCAACCAAAAGACATTGAAGTAAACTGTATGTCGTTTTGAATTTTTGAAATAAAGAATTAAATCAGTTGCATTTGATGTGAGCTGCATCATTGAAATGACTCGGTTCAGTTTCTTTCTCATATAGCCT----TT-GTTTTGTTGGTGATATGCAACATATGTTTGAAGGGCACATTTACTTCTTACCAAAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E424167" ref_strand="-" ref_description="SGN-E424167 [STM-43-K15]">
      <seq>gtttactccaatggcgtctggatggggaattacagggaacaaaggacgatgttatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtccttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtcatcactgacctttattcttgaccaatcatggttttatcaaccgaaagacatggaagtaaactgtatgtcgttttgaattttgaaataaagaattaaatcagttgcatttgatgtgagctgcatcattgaaatgactcagttcagtttctttctcatatggcctttgtttgtttgttggttatgcaacatatgttttaagggttaccatttggcactagacttgtgatgtcagttctttatttgaaatctgtgactcttaaatggaacgatcattcctcaagtattacgtatgaaaaaaatgcacgatgtccaaatatagagtggaaaaaactcgaggggggcccg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33826" stop="39023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34126" g_stop="34285" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38722" g_length="380"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="519" r_length="359" r_score="0.887"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E424167" ref_strand="-">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>540</cumulative_length_of_scored_exons>
        <coverage percentage="0.902" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E424167" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="34126" e_stop="34285"/>
          <exon e_start="38343" e_stop="38722"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTACCATTGGCACTAGACCTATGATATCAGTTCTTTCTTTGAAATCTGTGACTCTTACGTGTA</genome_strand>
        <mrna_strand>GTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAACAAAGGACGATGTTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTCCTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGA---TGGTGGTGGTGGTCATCACTGACC--T-TTATTCTTGACCAATCATGGTTTTATCAACCGAAAGACATGGAAGTAAACTGTATGTCGTTTTGAATTTTGAAATAAAGAATTAAATCAGTTGCATTTGATGTGAGCTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCT-TTGTTTG-TTTGTTGGT--TATGCAACATATGTTTTAAGGG-----TTAC--C--A--TTTGGCACTAGACTTGTGATGTCAGTTCTTTATTTGAAATCTGTGACTCTTAAATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E451828" ref_strand="+" ref_description="SGN-E451828 [cSTS-14-G22]">
      <seq>gtttactccaatggcgtctggatggggaattacagggaacaaaggacgaatgttatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtccttcttagagaagaactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtcatcactgacctttattcttgaccaatcatggttttatcaaccgaaagacatggaagtaaactgtatgtcgttttgaattttgaaataaagaattaaatcagttgcatttgatgtgagctgcatcattgaaatgactcagttcagtttctttctcatatggcctttgtttgtttgctggttatgcaacatatgttttaagggttaccatttggcactagacttgtgatgtcagttctttctttgaaatctgtgactcttaaatggaacgatcattcctcaagtattacgtataatatgaaatgcacgatgatccaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33826" stop="39023"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34126" g_stop="34285" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="162" r_length="162" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="0.94"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38717" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="163" r_stop="516" r_length="354" r_score="0.891"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="570" polyA_stop="581"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E451828" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.921" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E451828" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34126" e_stop="34285"/>
          <exon e_start="38343" e_stop="38717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACG-ATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAG-ACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTACCATTGGCACTAGACCTATGATATCAGTTCTTTCTTTGAAATCTGTGACTCTTAC</genome_strand>
        <mrna_strand>GTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAACAAAGGACGAATGTTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTCCTTCTTAGAGAAGAACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGA---TGGTGGTGGTGGTCATCACTGACC--T-TTATTCTTGACCAATCATGGTTTTATCAACCGAAAGACATGGAAGTAAACTGTATGTCGTTTTGAATTTTGAAATAAAGAATTAAATCAGTTGCATTTGATGTGAGCTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCT-TTGTTTG-TTTGCTGGT--TATGCAACATATGTTTTAAGGG-----TTAC--C--A--TTTGGCACTAGACTTGTGATGTCAGTTCTTTCTTTGAAATCTGTGACTCTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E424166" ref_strand="+" ref_description="SGN-E424166 [STM-43-K15]">
      <seq>gtttactccaatggcgtctggatggggaattacagggaacaaaggacgatgttatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtccttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtcatcactgacctttattcttgaccaatcatggttttatcaaccgaaagacatggaagtaaactgtatgtcgttttgaattttgaaataaagaattaaatcagttgcatttgatgtgagctgcatcattgaaatgactcagttcagtttctttctcatatggcctttgtttgtttgttggttatgcaacatatgttttaagggttaccatttggcactagacttgtgatgtcagttctttctttgaaatctgtgactcttnaatggaacgatcattcctcaagtattacgtataatatgagatgcacgatgatccaaaaaaaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33826" stop="39015"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34126" g_stop="34285" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38717" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="161" r_stop="514" r_length="354" r_score="0.891"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="568" polyA_stop="578"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E424166" ref_strand="+">
        <total_alignment_score>0.918</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.926" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E424166" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34126" e_stop="34285"/>
          <exon e_start="38343" e_stop="38717"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTACCATTGGCACTAGACCTATGATATCAGTTCTTTCTTTGAAATCTGTGACTCTTAC</genome_strand>
        <mrna_strand>GTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAACAAAGGACGATGTTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTCCTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGA---TGGTGGTGGTGGTCATCACTGACC--T-TTATTCTTGACCAATCATGGTTTTATCAACCGAAAGACATGGAAGTAAACTGTATGTCGTTTTGAATTTTGAAATAAAGAATTAAATCAGTTGCATTTGATGTGAGCTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCT-TTGTTTG-TTTGTTGGT--TATGCAACATATGTTTTAAGGG-----TTAC--C--A--TTTGGCACTAGACTTGTGATGTCAGTTCTTTCTTTGAAATCTGTGACTCTTNA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E588916" ref_strand="+" ref_description="SGN-E588916 [42479]">
      <seq>gtttactccaatggcgtctggatggggaattacaggaacaaaggacgatgttatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtccttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatttacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtgggggtggtcatcactgacctttattcttgatcaatcatggttttatcaaccaaaagacattgaagtaaactgtatgtcgttttgaatttttgaaataaagaattaaatcagttgcatttgatgtgagctgcatcattgatatgactcagttcagtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33826" stop="38890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34126" g_stop="34285" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="159" r_length="159" r_score="0.975"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38590" g_length="248"/>
          <reference_exon_boundary r_type="cDNA" r_start="160" r_stop="408" r_length="249" r_score="0.927"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E588916" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E588916" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34126" e_stop="34285"/>
          <exon e_start="38343" e_stop="38590"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGT---GGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAA-TTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTC</genome_strand>
        <mrna_strand>GTTTACTCCAATGGCGTCTGGATGGGGAATTACA-GGAACAAAGGACGATGTTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTCCTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATTTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGGGGTGGTCATCACTGACC--T-TTATTCTTGATCAATCATGGTTTTATCAACCAAAAGACATTGAAGTAAACTGTATGTCGTTTTGAATTTTTGAAATAAAGAATTAAATCAGTTGCATTTGATGTGAGCTGCATCATTGATATGACTCAGTTCAGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E540401" ref_strand="-" ref_description="SGN-E540401 [TUS-60-K14]">
      <seq>ctccaatggcgtctggatggggaattacagggaataaaggacgatgctatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtacttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatggttttatcaactaaaagacattgaagtaaactgtatgtggttttgaattttgaaataaagaattctatcagttgcatttgctgtgagttgcatcattgaaatgactcagttcagtttctttctcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33831" stop="38899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34131" g_stop="34285" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38596" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="409" r_length="254" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E540401" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540401" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="34131" e_stop="34285"/>
          <exon e_start="38343" e_stop="38596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTC</genome_strand>
        <mrna_strand>CTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGCTGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E540403" ref_strand="+" ref_description="SGN-E540403 [TUS-60-K14]">
      <seq>ctccaatggcgtctggatggggaattacagggaataaaggacgatgctatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtacttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatggttttatcaactaaaagacattgaagtaaactgtatgtggttttgaattttgaaataaagaattctatcagttgcatttgatgtgagttgcatcattgaaatgactcagttcagtttctttctcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33831" stop="38899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34131" g_stop="34285" g_length="155"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="155" r_length="155" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38596" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="156" r_stop="409" r_length="254" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E540403" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E540403" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34131" e_stop="34285"/>
          <exon e_start="38343" e_stop="38596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTC</genome_strand>
        <mrna_strand>CTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E288330" ref_strand="+" ref_description="SGN-E288330 [cLES-16-J14]">
      <seq>tccaatggcgtctggatggggaattacagggaataaaggacgatgctatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtacttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatggttttatcaactaaaagacattgaagtaaactgtatgtggttttgaattttgaaataaagaattctatcagttgcatttgatgtgagttgcatcattgaaatgactcagttcagtttctttctcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33832" stop="38899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34132" g_stop="34285" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38596" g_length="254"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="408" r_length="254" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E288330" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="0.978" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288330" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34132" e_stop="34285"/>
          <exon e_start="38343" e_stop="38596"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTC</genome_strand>
        <mrna_strand>TCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E722708" ref_strand="+" ref_description="SGN-E722708 [FC18AC10]">
      <seq>tggatggggaattacagggaataaaggacgatgctatgatttctggatggatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtacttcttaaagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtaaatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatggttttatcaactaaaagacattgaagtaaactgtatgtggttttgaattttgaaataaagaattctatcagttgcttttgaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33844" stop="38853"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34144" g_stop="34285" g_length="142"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="142" r_length="142" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38552" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="143" r_stop="352" r_length="210" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="353" polyA_stop="372"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E722708" ref_strand="+">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="0.946" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E722708" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34144" e_stop="34285"/>
          <exon e_start="38343" e_stop="38552"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTG</genome_strand>
        <mrna_strand>TGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAAAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAAATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCTTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E218343" ref_strand="-" ref_description="SGN-E218343 [cLEL-18-B24]">
      <seq>gatttcagtgagtgtatgtctcgatgcagggagcccaaggactgtgtacttcttagagaagactacttcgagtgtcttcatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaaggaaggtgtagatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatggttttatcaactaaaagacattgaagtaaactgtatgtggttttgaattttgaaataaagaattctatcagttgcatttgatgtgagttgcatcattgaaatgactcagttcagtttctttctcatatggcctggccttcgttttgttggtgataaggaacatatgttttaagggcacatttacttcttaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33893" stop="38962"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34193" g_stop="34285" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="93" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38662" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="94" r_stop="413" r_length="320" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="414" polyA_stop="433"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E218343" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>413</cumulative_length_of_scored_exons>
        <coverage percentage="0.954" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E218343" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="34193" e_stop="34285"/>
          <exon e_start="38343" e_stop="38662"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTA</genome_strand>
        <mrna_strand>GATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E234065" ref_strand="-" ref_description="SGN-E234065 [cLEL-8-M9]">
      <seq>gcccaagggctgtgtacttcttagagaaagactgcttcgagtgtctacatcattccaaagagtatcaacgtaggaaccgaatctacaaagaggagcagcgccaattgagagctgcttcacaaaagaaaaagaaaggtgtaaatggtggtggtggtggtcatcactgacctttattattcttgatcaatcatggttttatcaactgaaagacattaaagtaacctgtatggggttttgaattttgaaataaagaattctgtcagttgcatttcatgtgagtcgcatcattgaaatggctccaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="33925" stop="38879"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34225" g_stop="34285" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="62" r_length="62" r_score="0.918"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057">
            <donor d_prob="0.994" d_score="0.92"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="38343" g_stop="38580" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="63" r_stop="300" r_length="238" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="301" polyA_stop="324"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E234065" ref_strand="-">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>299</cumulative_length_of_scored_exons>
        <coverage percentage="0.923" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E234065" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="34225" e_stop="34285"/>
          <exon e_start="38343" e_stop="38580"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCCCAAGGACTGTGTACTTCTTAGAG-AAGACTACTTCGAGTGTCTTCATCATTCCAAAGAGGTACATTTCGATTTTTTTTCCCATTAGATTCCGATCTCTTTGGTATTTTCACCTTTGCTTAACAATCGTCCTTATCCTGAAGATTTAAACAACTCAGCAGTTCCATTAGGCAATTTGTCCTCAGCTGTATTTAGGGTTTTTAGAGATTTGATACTTTATAATCTGAATTGGTTCGAATAAAAGCTTCTCAGATTTGAATTCCCTCAAAGTATGGATTTTTTTTTCATTTTTCATCCAACATCAGATATATGTGTGGAACTGTAGGAGGTGATTTGCACTGTAGTTATTGATGATGGCGTTTATTAATTGACGAAGCAAGCAACTTGTTAATGAGTGGATGGAACTACAGAGAAACAATATGGATTGTAAGGTTTGTAGAAGTAAAATAGTAAACATGCTGAAAAAACTGTAAGTTTTGCTCTCATAAGAAGAACAAAAGTAAAGTGGGATTGGGCGAGATTATATTTCCTAAATGCAAACAATTTAGTTATCTGAGTCTAGTCTTACATGAGAATGACGTGATAGATAGAGATATAGCATATATAATGAAAATAGGATGGTTGAAGTGGAGGAGGTGCTGCATGATTACTATGTGATAGAAAGACACCTAATAAGTCAAAGGAAACTTCTATGGAATGGCTGTGAGAATAGCAATTTATATTATGGTAGTGAATATTGGTCCTCTAAGTTTCATCATATTAATAAAACAAGTAACATAGAAATGTGATGTTAAGATGGATATGCAGTCAGCAAGATGTACAAGATTAGAAACAACACATCAGAAAGATAGTTCAAGTAGCATACAGACATAAAATAAGAAAAGATTGATGAGATCGCTTGGCATGTATAGGGGAGGACCTCCATATATAGTATCCATTTATACTTGTACTGCACTCTTTCTTGGAATACCAAGGAATATAGATATTTGAAAATATTATGATTTTATGTCAAGGAAAATACATCTGATGAATCATACAGGGAAATGGAGAAAGTGGTATTTGTAAGTCAACCTATCGAAAAATTCACCAAATATGCATATGGCTGATGTCTAGTCGCCAAACATCATGGCAGGCTTACCAAGTATGCATGGATATCATTTCAAATAAATGCCTGTTTATCAATCTGGTTCATTATTTCAAACTTGAAAATAGAGAATTCAAAGTTTGAGGAGAGTTTATTGAGTAATATAATGGTTCACTTACAAGTCGTCAACTTTTTTCCAAGTGAATTTCATCTCCAAACACTACTTTAACATCCAAATATCCTTTTTCAATTTCAACTTACTCTTCTTTCCATTTCAAATTTTACCCAAAATTATGTCCAAATGCCAATTGATTCGTACTTGGTCTATATCAGTATAGCTGTTACTTTGAACTAGTTATGGTTCCCTTTAAGCTCTATTTGGGGGAAATTCAAGGTTACTGGCGATGACAAAATTTGGCTCACCAGCATGCCACATTATATATCTGCTAGATCTTTTCATTATTTGGATCATATCAAACACATTATGTGACTAAGCAGCTGAGGAGGACTTAAATTTAAGTAGGTGCTCTGAAGCCTTGTCATGTGATAAGAGATCTATAAATGATATATTTTGCTGATTGAAGGTCGTAAAATAACCCGAGATAGACCTAAATTAGTGGAGGGAAGTCGTCTCAAAAGACCTTTTAAGTTCTTTAGATTACAGATATTTTCTCATTCTTTGTAGCACAGATGTGGATTTCCACCCTTTGTCTATTTTAGAGTTATACCTGGACTTCTCTTCTTTTTTTTTGATAAAAAAGTTATACCTAGACATACCTCTTTGATTCGTCTTATTTAGGGTCTTTCACTCTTATCGAAAATAAAAACAAAAATTTAGGGTCTCTCAAGTGATTTCTTAGAGAAGCCATGAAAGCAAAGGCATTGCTATAAGTAGGAAATGGAAGTAGTCAATTTACAAGGACTGAACTGGAACATCTGTAGTTAAGCACCTTGTGTGCATTGTCTCGTCCTAAATCTGTAGAAAACATTACATCAGCTAATTTTTTATGGAGTCTCAAAAAGAGACGAATCTTGATTTATACAGCTATTTTTTTCCCTGTTATTTGATTTTGGCTCTTTCATTAATTGATCTTCTTGTCACTATCAGCATTACTATCTACTCTTCTGAGAAGCGTTGTTATTTTCTCTTGGAAGTGCCTCAAGCTACAGCCGAGATCTTTCTCATAAGTTGGGGGCTTGTGGTTAGGTGTTTTATGGTCCTGACAAGTTGTATAAACCTCATTACTTGATGTAGAAATTAGATTAGAAATTGGTGACAGGTGAAGTAATAGGAAAGAAGCTTCAATAGCTGTTTGTAGATCTCACCCAGCGAAGTAGCAAACCCTCCTTTCATTTTCCGTGTTGAGAGTACACATTTCAGTTTGTAGCTCATATACTACTTGTATTAATACATGCTTAATTATTCTAATATGTTAATGAGTGAAGTAAATGGTGGAAGCCTTTTCCAAGTTTAGCTACTGCAAGAAATTACCTACATCAAGGAAACTATGTTTTCTTAGACTTAATGGCATTAGTTGAGTGAGAAAGGTACCTTCTACTGTGATGGTGCCAAATAAATTATGATCTCTGTTCTCAAAGTCAGGATTTGCTAATCCCTGACCTTTGCAAAATCAGATATTTGTATGTAGAAAAACTTTGGCATTTATTTCTACCCCCAAAAGAAAGAAAAAGAAAAGAAAGTGATGGGAAGTACTTAATAATCTCAATGGGCAGTATTTCTCTCTGCTCATCTGAAAGTGATGTCTTTCGTCCCTGTTTATACAATCATCCTCTGTTCATCTTAATCATTGACTCAATGGGCAATACTTCTCTCTGCTCAACTGAAAGCGGCATCTTTCCTCCCTGTTTATAAAATCGTCCTCTGCTCTTCTCTTTGTCATATAGAGGCATGAATTTTGTAGAAACCTCTTCTTTTGACTAGTTATAATGTTTTAGGGACTAATGTATTTCCATTTAAAATCAGATGATGCAATTAGAAAATGCTCCACGTATATGGACATATACTTGCATGTGGTAACATTTTGTGAAATTATATTTGGTGAAAATTGTGGAGCATTGCTATCTCTCTAGTGTCTATGTTCCTTCAAATTAGGTTGAATTTGGAGCAAAGTCCCATTGATATCCAAGAATAGTCCTTGCCCGTTGAACGAATAAACTTTAACATCTATGGCAGACATTTTCCAGGGTGTGTGAGTGTCTTCTGACTTCAATATGTTAAATTAGGTATTGTGTCTGTGCTTCCTATCCTCTTCTTTTCATCTTATTGGGACACTTTAGTGCTCTACCTAGATTGTTGGATTACTAATCTACTGACATTTGAAACTCCGTATGGTACTCTGGTTTTCACTTTTCAGTCTTTCACAGTTCCACTATTTGTAGATCAAACTTGTTGGATCCTTTGCACCTCTTAATTCTACTTAGATTCATAGACTACTAACATACTATCCTACTTGTTCTGCTTATGTTATTGTTATTGCTCATGTTCAGGACAATGCTTTTTGATTGATTAGAACTCATTAAATTTGATTGATTTCCTTCTTAATTTAACCACAAATAAGCCCAAATTGGCCTTATAAGACACTTTGATATATGTATCAACTGAAGATTAAGAGATATTGAAGCCTTGAGGTGCATGAATTAGTAGTGTTCATGTGGTGTACCGGTGCCTTAAGCTCATTATTTTTCTGGGACAGACTATAGAACTCTATTACTTGGCTACTGTCGATGTCTTATACGATTGAGAGTTCTTTCTCTACTATGTTACTGCCCCACCTGCTACATGCTTGTCTCCTACTTATTAAAAAAATGGATATATGGTCATTCCCTCTTCACTTCCCCTCCTTTTGAGCTGTCGATGACCGACTGATTCAATCCATGTTGTCATTTTTGATGTGGTAAAATTCTTTGGAATTCTCTAGCTCAAAAACAAATGATGGCTCAGATATATTCATAAATCGTTTGGTACTTCTCATTGTACTCTTTAGTTACAGGGTTGTTGTTTCCTTTACTGCAGTATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCA</genome_strand>
        <mrna_strand>GCCCAAGGGCTGTGTACTTCTTAGAGAAAGACTGCTTCGAGTGTCTACATCATTCCAAAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGAAAGGTGTAAATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTGAAAGACATTAAAGTAACCTGTATGGGGTTTTGAATTTTGAAATAAAGAATTCTGTCAGTTGCATTTCATGTGAGTCGCATCATTGAAATGGCTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E485952" ref_strand="+" ref_description="SGN-E485952 [cSTE-20-C18]">
      <seq>ttctaacccaaaccaaatcaacaaaattctcccaaaattcgattctctgaactctgaagcatcgaaaattgttaacttttgtagcccattgatgagtcaaggagtataaaattttgtaaaagattagaagaaatggggaacagaggccatactcagtacaggacgacaaggagaacgtccaatttctcaattactctatacatttttctcctttttgttttctcaatgttcgtattcttttattacactaaagatatggctgaagatgaacaaaagcctgtcttggcatcggagaagaaggaggagcctgaattcgatgagaatgaagataattctgtttgggaagcttcaaagagccatggtttacatccatgcattaagccaactgcaaaatacaaagctgctctaggatggaatcgctacttgactgtaaaaagtaatggtggattaaatcaaatgaggacgggtatagctgacatggtggcagtggcacatgtgatgaatgcaactttggtaattcctcaattggacaagcgttcattctggcaagattcaagatatatttgatgagaaccatttcatcaaagcattacgaggagacctcatgattattaaagagcttcccaaagaaatagaatctttacctcgagctaggaagcactttacgtcatggtcaggagtgggttactatgaagaaatgactcaattgtggaaggagcatcaggtaattcatgttgctaaatctgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="40513" stop="47836"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40813" g_stop="41123" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.865"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41124" i_stop="41551" i_length="428">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41552" g_stop="41630" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="400" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41631" i_stop="42030" i_length="400">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.471" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42031" g_stop="42098" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="401" r_stop="468" r_length="68" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42099" i_stop="44672" i_length="2574">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44673" g_stop="44761" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="469" r_stop="557" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44762" i_stop="45240" i_length="479">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.648" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45241" g_stop="45407" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="558" r_stop="724" r_length="167" r_score="0.982"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="45408" i_stop="47510" i_length="2103">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="47511" g_stop="47536" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="725" r_stop="750" r_length="26" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E485952" ref_strand="+">
        <total_alignment_score>0.934</total_alignment_score>
        <cumulative_length_of_scored_exons>740</cumulative_length_of_scored_exons>
        <coverage percentage="0.987" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E485952" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40813" e_stop="41123"/>
          <exon e_start="41552" e_stop="41630"/>
          <exon e_start="42031" e_stop="42098"/>
          <exon e_start="44673" e_stop="44761"/>
          <exon e_start="45241" e_stop="45407"/>
          <exon e_start="47511" e_stop="47536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGTAACCCAAATCAAATCAAC-AAATTCTCCCAAAATTCGACTCTCTGAACTCTGAAGCATCGAAAATTGTGTAATTTTGTAG-CCATTGATGAGTCGAGGAGTGTGAAATTTTGT-----AT---AAGAAATGGGGAACAGAGGCCATACTCAGTACAGAACGACAAGGAGGACATCCAATTTCTCAATTACTCTCTACATTTTCCTCTTTTTTGTTTTGTCAATGTTCGTATTCTTTTATTACACTAAGGATATCGTAGAAGATGAACAAAAGCTTGTCTTGGCATCGGAGAAGAAGGAAGAGCCTGAATTCGATGAGGTTGTTATTTAATTTATTTATTTCTTGAAATTGCTTAAAGTTTTCATTTTTATGGTGATTCTGCTGTGTTGTTTTGCTTATATTGCTTAGTTTATTGATGGGTGGTTTGAGCTGATCTTTTGTAATTTGGGCTAGAGAGTTTCTGGATATGTCATAATTTTCTGAAATTTTGCTTTTTATTGCATCAAGGGGTGGCCTAGTTGGTGGCGGAGTTAGGATTTTCAAGAAAAGGATTTGAAATATAAAAAGTACAGGCATATGTGAAATATTACTTTAACAATGTAGAAATAGTGTAGTTTTTTGTCGTAGGTTCGGAAGAACCCCTCAGCTCTTGCTTGCTACTCCCGTTGGCCTAGTTGTTAATGGAGTAGGTTGAGCACCATGAGATGACTTGTGTTAGTGAGAACGTCTTCTTTTGACTTTTGCAGAATGAAGATAATTCTGTTTGGGAAGCTTCAAAGAGCCATGGTTTACATCCATGCATTAAGCCAACTGCAAAATACAAAGGTTAAACTCTACTACTACAGCTTGTGCTTCTTTTGCTACCTGCTAGTTAATATGGAAAAAAGGTATCTCCATTGCCTTTTGGGAGCACTAATTTTTTCTGAATTTTGTAAAAGGGAAATACTTGATTATCTCAAGATCTCATTTTTCAGATTCTTTTTATAGGGTGTGGGGACAATTTTCTGTATGTCGTTTCTTATGTGTTCTATCAGTTCATGCCTGTGTTTGTTTAAAGCTGAAACAGCGTATTTCAGTCATAAAAATAGATAAAAGATCATGCCTTTGCTGTTTTCTATCAATTGCAATCTCTTAAACATGTACCAACTCATGCACAATATGAACCTTTTGTATGCTGTAACTTTTAAGCAGATAGTCTTATGCAGAATTTATACTTCTTGTCCAGCTGCTCTAGGGTGGAAACGCTACTTGACTGTAAAAAGTAATGGTGGATTAAATCAAATGAGGACGGGTGTAAGTTTGATCTTTCCTTAGATTTCTAATTTCCATTTTCTGTGTGTATGTTACATAATTGTTCTTGTTTTTAATCCACAATAATTCAAAGAAATTGCTTTCATGCTACGGTTAGACGAGCTAAAAGTGTGGATTAGCTTAAACATGTAAATGCTAGTGGGCATGTAGTAACTTGTATGCACTTCTACTTGTATATTCCTAGGGTATCATTCAACAAGTTAACTTGATTGAAGCTGAGCCATTTAAAACCTTCAGCTTAGAAATAGATATTAAAGTAAGACAAATTAAAGTGGGCCTTTAAGTTTATACGCTGTTTGGAATGAAGTCTGTAAAAATAGCATTCATAGATAAAGGGGGTGGGGGGGAAGTTAACAAAAAAAGCAGTCTCATACGAAGTTGTGTTGCTGCAAGGAAATAGCTAAATGATGCACTAGCAATTTGATGATTCTTTAAATTTGAGACATATTTGGTATACAGAAAAACACTTTTCTCATTTATACTTTTTATCACATAAAATAATCATAACATGTCATATGAATGGGAATTAGATTTCTATAAGACCAGAAAACGTTGTTCCCAGCAAGAAGACGATGAATTATGATTGTAAGTTGGCATAGTTTTGGAAAGAAATGGCAGATCTGGACATGTCTATTGGTTAAGGTTGACCTCGCCCAATTTTATTAGCTTGATCTCCTTTTCTCTTCATGGAAAATTAAATAAACGTCCAAGTTTTTGTGGCATCACAGAAACTTACATGTTAATTTTGTAAGTTTACTTCAAATCCTCAAAACCCTAACTTGGCAACAAAAAGAAAGAATGGTTATTTTGAAAACAGAGTTGCCACTTAATTTTGCAAGGCAATTATGAAAACCTTTAATTTTTAAAAAAAGATTCTAACAGAAAAATCTTTTCAAAATTTCAAAGATAGGGTTCCTATTAACATTTCGAGAAGGTTCTAAGCCCTTGAAATGTCTGCTTAACACATGGTTATCTGTTGATTTAACTAAACAATTATTTGACTAACTTAATTGATTGAAGAATTTCTTAAATTTTTTAATATGTGAAAGGAAAAAGTATTTTTGGCATTTTGTTGAAAAGAAAAGCTCTTTTGGACTGTTTGAAAAGAAAAACTCTTTTGAAACTCTCAAGGCAATCTAAGTTAATTTAAAACTTCAGTATTTAAGACAAATAAAATTACAAGGAACCAAAAATAAAACATAGCAACTCAAGGGGGATTCATCCAAGTTAGAATGAATGTTAGTATACAATACAATGAAATCAAGAAATAAGAGAAAATTTAAATTGGGCTCCTGAGACCCAATCTTTGCTACTAACAGATGATCTTCAGGCTCTATGCAGTATTACTGCTCCTACCCCATTTTATCTGCTCCTGCTGATGTAATTTCGGCCTCTGGACAGATTTATCTTCCATTTTCACACTGTTTGAGGCTGACTCAAAAGACATGTATTGAGCTTTAAGCAAATGCCAAAAATGATTGACTTAACTTAATGTCATACAATGCTTTGAAATTATGATAATAAAAATTTGAATAAGAACTCCATTTTTTGACCATTTTTGAGTTTTAACTCTATATCCAGATAATGAAATCATGCACCATACATATTTGATTCATATGTGTCAAATTAGAAACCTGGAACTTATCATACGTGTAAATCAAATTGAGTATTATGCTAACTAGAAGAATTAGTTTCCTCAAACCAAAGCTATCAGTCATACCAAATTCTATAGGTCACTAAGTTAACTTCAAATTCTTTCTCAAAATAAAATAAAATAGTTAACTTTAAATTGAAACATATCATAAAAATAAGATTTCATCTACTCTTAATCTACGAATTGAACATATCATAGAATAAGATATTCATCTACTCTTAATCCACTTTTAAAGTTACTAGATCAAATAATATTTTTACTTAGTAAGGAATTGACATGTTGCCAGGAAAATCTAAGACTCGATTTTTCAAAGATAGGCAAAATATCAGACAGGAAATAAACGCATAAGTGTCACTTTATTTTAAAGATGAGCTGATTTACGGGTGGAAAAAGGATGAGACGGACAGGAATTTGCCCGTGGATTTGGGATTTGCACATCCGAGGGTTGACTTGCGTTGAGCCTTGGTCTTCTTGTATCTTCAGCCGTTGCATTCCCAATATACGTTGATGTAGACATTATGAAATTCCCAATTTCTTGTATAATGGGTGGAAATAAAGTTTTCAAAGATGGGCGCTGAACCTTGGATAGGATGCCACGTATCTCGGCGTTGTTCGAACATACAAGGACTGATCTTTGATTTTCATTTATTCACGTTCACTCCAAGGGACAAAGTTCCATAAGTTTTGCTAATTTTGTTTTACATTGGTAAGATGATTATGCCATGACTTCTGAAGTGCTGACTCATGAATCATTATGTTGTTGGATGTAGTCCCGTCTCATTATTGAAATGTCATTCTGGTCATGCCCTTTCTTTAAGCAAATATATCCACATATTTATAAGTTAATGAAGTACTTTCCCCTTCAGTCTTAATTTTTTCATTTTGCTTCTTTTTGCTTACAGATAGCTGACATGGTGGCAGTGGCACATGTGATGAATGCAACTTTGGTAATTCCTCAATTGGACAAGCGTTCATTCTGGCAAGATTCAAGGTCATATTTTTTTCTGTACTGTATATCTTACAACTTCACATGGCTTGTCATTCTTTTAGAAATGTGTTTATATATGTAATGTATTGCTTAGATGGTGGTCTCCTTGTATGGACTTGTGCAGTCCCCTCCTCATGGGCTAGATTTTGAGGTTGAGTTAGGTCCAAGATTCATTTATTTACATGGTACCATAGCAGGACCCATCATACCCGATGTTGAGCCCCAAAATTAAATTGCCCATGCTCCAGCTGTCTGGTCTCTTTTTATGGATTTGGGCAATCCTCCACTCACGAGCTATCTTTTGAGGTTGAGTTAGGCCCAAGATCTATTTCTTTACAAGTTTAGACTCTGATATTTTTCTTGTTTCTTGTAAAATTTCTGATGAGTGCTTTGATCTCTACCAACTGCTTTTTTTTTTTCACTTTATCTAAACATACTTACTCTAGTTTGTTCTAATGGGCTAATGTACAGTACATTTTCAGATATATTTGATGAGAACCATTTCATCAAAGCATTAAGAGGAGACCTCATGATTATTAAAGAGCTTCCTAAAGAAATAGAATCTTTACCTCGAGCTAGGAAGCACTTCACGTCATGGTCAGGAGTGGGTTACTATGAAGAAATGACTCAATTGTGGAAGGAGCATCAGGCATGTAAAATCTTCTTCCTATCACCCTTTTTTTTTTTAAGGTAGATTGTCTTAACCTCTCTCTTGCAATGGCCACCAAATCAAGAAATTGTTGCTACCTTGTTGCGCTTGTTTACTGCCATGGAAATTGTTAATATATAAATAGAAGATTGTGGAACATGGTGTCGAAGTTATTATATATCTGTATGGACAACATCCTAATAGTGTGCATAGCGGTCTTACACATTCAGAACATTTCTCTTTTCAAACAATATTTGCTCAACAAAACCTCTGATGTTTATATGAGGGTTAATTTTATGAAGGGTCACTCAGCTTACTCTTTATTGTACTAAAATTACTCTACTATTTTTTGTAACAAGAAAATCACTTAACTTTATTTAAGTATCACGGAAGTCACTAAATTTTTTTTTTTTGCAAAAAAAAAAAGTCTCTCAACTTTGCCTAAATATCAAAAAAGTCATTAGGAGAATACAAAAGAGACATTTTATATGATAATTAGGTAAATTTGAATTGATTTTTTGGTTACAATAAAAAATGCTTACTGACTTTCTGTAACACTTTCAGTGATTTTCTGGTTACGCGAAATAGTTTATTAAATTTTTGTCATACTATAGCTAAGTTGACTGATATTTTAAATAATTTCTTTGTATAACCATTTGGTGCAACATAAAAACTGCAGCTATCCATAATTAAAAAAGGTAATATTGGAAGATGTTCTGAACCTAAAACTACTCACAGAAATCCTAGACCATCAACTAAGGATTCTATATCTTCCATATATTCATGTTTACACCAAAAATAACAAAAGGGCTAAACACTTCGTCTTCAGTTTCTGGATGGAGCTAGTGTTGTCTTCAGGACACCTTTGATTCTCTCTTTCCGTAATGCAAGCAGGAACAGTCTTCCATCTTTCCTTCTATTTTGAGTGAATGTTGTATTCGTTCCAACACTACAAGTGTATCTCTTGGCATCACCCTCATGATTCCTGTTAAATTATGGAAAATCCTCCAAGGTTGTTCAGTTAACTTGCAATGGAGAAAAATGGCTGATTGTCTCTGTTTCTTCTCCACGCATATAACGTCTAGAGCATAGGTGGAAGCCCTTTTTTGCAAGATTTTCATGAGTTAGGACTTAGGACTTCTTTCCTGGCCACGAGCGAGGTGAAACTTGCAACCAGAGATGAATTATGACTTTCTACATGAATTTCCAGGGCCAACCACTAAGCTGGTTGTTGGATTGATTAAACTCTTTGTAGGCTGACTTGACTGAGAATCTCTCTAGTTTATCCACTTGCATACAGTACTGTGTCTTCAGAGGCATAAAGGCTCTTGAATAAATTGAGAGGTGTAGAATACTGCCAATAATTCTGAAGCTCAGGTTTCAGCCTTGATCATTCCAAACTTTTTCTACAGTGGCATCTTGAGGTTGGGTCAGACTGAAGATAACAAGAAAGAGTTACGTTAGTGGGTGTTTCACCTAACCAACTGCTTGAGTGATTTTTTGTTACAAAAATAGACTTTGGTGCAATAAAATAAAAGTTGAGTGACCATTCGTGAATCTACTCCAAATATATGAAAGTTGTAAGTAATATGATAAGCAACTTTCATTATGTTGTTCGATTTGATGGAGAATAAGGGACAACTTCACTAACTATTAGCAGAAAGCAAATTAAAAAGCTTGAAGTGTATTGTATCACTTCAATGCTCAGCTCAAGCTGGTGCAGACATATCAATGAATTAATACCAAAAACTTGCAAATATTAATCAGTTGAAGCCTTGTCATGGAAGGTATAATTGACCATTGAAATTTATTAGCCACGAAATTGATCTTTCTTTTCAATAGTCTAAGATTTGTTAACTACTCTAAGATGTCGGAGATAGCATTTAATCCCAAAACTATGAAATCTGGAAGGGGATTAAATTTATTATTTTATTTAAACTTTATCAGTTTATGATGTTGATATTATCAGTAAAATCCGTTATTACAAGGGATGCTTTATTTCTATTTCCTTTTGTTCATGAGACTTGATCCCATTTTTCTCTTGCCTTGTCTACTAAAGTATATGTCTGAAATCGAAAGTTAGCTTATTGCACATTATTGCAGGTCATTCATGTTGCTAAATCTGATTC</genome_strand>
        <mrna_strand>TTCTAACCCAAACCAAATCAACAAAATTCTCCCAAAATTCGATTCTCTGAACTCTGAAGCATCGAAAATTGTTAACTTTTGTAGCCCATTGATGAGTCAAGGAGTATAAAATTTTGTAAAAGATTAGAAGAAATGGGGAACAGAGGCCATACTCAGTACAGGACGACAAGGAGAACGTCCAATTTCTCAATTACTCTATACATTTTTCTCCTTTTTGTTTTCTCAATGTTCGTATTCTTTTATTACACTAAAGATATGGCTGAAGATGAACAAAAGCCTGTCTTGGCATCGGAGAAGAAGGAGGAGCCTGAATTCGATGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAAGATAATTCTGTTTGGGAAGCTTCAAAGAGCCATGGTTTACATCCATGCATTAAGCCAACTGCAAAATACAAAG................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCTAGGATGGAATCGCTACTTGACTGTAAAAAGTAATGGTGGATTAAATCAAATGAGGACGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTGACATGGTGGCAGTGGCACATGTGATGAATGCAACTTTGGTAATTCCTCAATTGGACAAGCGTTCATTCTGGCAAGATTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATGAGAACCATTTCATCAAAGCATTACGAGGAGACCTCATGATTATTAAAGAGCTTCCCAAAGAAATAGAATCTTTACCTCGAGCTAGGAAGCACTTTACGTCATGGTCAGGAGTGGGTTACTATGAAGAAATGACTCAATTGTGGAAGGAGCATCAG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTCATGTTGCTAAATCTGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E252889" ref_strand="+" ref_description="SGN-E252889 [cLEG-16-F8]">
      <seq>attcgactctctgaactctgaatcatcgaaaattgtgtaattttgtagccattgatgagtcgaggagtgtgaaattttgtataagaaatggggaacagaggccatactcagtacagaacgacaaggaggacatccaatttctcaattactctctacattttcctcttttttgttttgtcaatgttcgtattcttttattacactaaggatatcgtagaagatgaacaaaagcttgtcttggcatcggagaagaaggaagagcctgaattcgatgagaatgaagataattctgtttgggaagcttcaaagagccatggtttacatccatgcattaagccaactgcaaaatacaaagctgctctagggtggaaacgctacttgactgtaaaaagtaatggtggattaaatcaaatgaggacgggtatagctgacatggtggcagtggcacatgtgatgaatgcaactttggttattccctcattggacaagcgttcattctggcaagattcaagatatatttgatgagaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="40548" stop="45557"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40848" g_stop="41123" g_length="276"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="276" r_length="276" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="41124" i_stop="41551" i_length="428">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.839" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41552" g_stop="41630" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="355" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41631" i_stop="42030" i_length="400">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.471" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="42031" g_stop="42098" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="356" r_stop="423" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="42099" i_stop="44672" i_length="2574">
            <donor d_prob="0.928" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="44673" g_stop="44761" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="424" r_stop="512" r_length="89" r_score="0.955"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="44762" i_stop="45240" i_length="479">
            <donor d_prob="0.992" d_score="0.92"/>
            <acceptor a_prob="0.648" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="45241" g_stop="45257" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="529" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E252889" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E252889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40848" e_stop="41123"/>
          <exon e_start="41552" e_stop="41630"/>
          <exon e_start="42031" e_stop="42098"/>
          <exon e_start="44673" e_stop="44761"/>
          <exon e_start="45241" e_stop="45257"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCGACTCTCTGAACTCTGAAGCATCGAAAATTGTGTAATTTTGTAGCCATTGATGAGTCGAGGAGTGTGAAATTTTGTATAAGAAATGGGGAACAGAGGCCATACTCAGTACAGAACGACAAGGAGGACATCCAATTTCTCAATTACTCTCTACATTTTCCTCTTTTTTGTTTTGTCAATGTTCGTATTCTTTTATTACACTAAGGATATCGTAGAAGATGAACAAAAGCTTGTCTTGGCATCGGAGAAGAAGGAAGAGCCTGAATTCGATGAGGTTGTTATTTAATTTATTTATTTCTTGAAATTGCTTAAAGTTTTCATTTTTATGGTGATTCTGCTGTGTTGTTTTGCTTATATTGCTTAGTTTATTGATGGGTGGTTTGAGCTGATCTTTTGTAATTTGGGCTAGAGAGTTTCTGGATATGTCATAATTTTCTGAAATTTTGCTTTTTATTGCATCAAGGGGTGGCCTAGTTGGTGGCGGAGTTAGGATTTTCAAGAAAAGGATTTGAAATATAAAAAGTACAGGCATATGTGAAATATTACTTTAACAATGTAGAAATAGTGTAGTTTTTTGTCGTAGGTTCGGAAGAACCCCTCAGCTCTTGCTTGCTACTCCCGTTGGCCTAGTTGTTAATGGAGTAGGTTGAGCACCATGAGATGACTTGTGTTAGTGAGAACGTCTTCTTTTGACTTTTGCAGAATGAAGATAATTCTGTTTGGGAAGCTTCAAAGAGCCATGGTTTACATCCATGCATTAAGCCAACTGCAAAATACAAAGGTTAAACTCTACTACTACAGCTTGTGCTTCTTTTGCTACCTGCTAGTTAATATGGAAAAAAGGTATCTCCATTGCCTTTTGGGAGCACTAATTTTTTCTGAATTTTGTAAAAGGGAAATACTTGATTATCTCAAGATCTCATTTTTCAGATTCTTTTTATAGGGTGTGGGGACAATTTTCTGTATGTCGTTTCTTATGTGTTCTATCAGTTCATGCCTGTGTTTGTTTAAAGCTGAAACAGCGTATTTCAGTCATAAAAATAGATAAAAGATCATGCCTTTGCTGTTTTCTATCAATTGCAATCTCTTAAACATGTACCAACTCATGCACAATATGAACCTTTTGTATGCTGTAACTTTTAAGCAGATAGTCTTATGCAGAATTTATACTTCTTGTCCAGCTGCTCTAGGGTGGAAACGCTACTTGACTGTAAAAAGTAATGGTGGATTAAATCAAATGAGGACGGGTGTAAGTTTGATCTTTCCTTAGATTTCTAATTTCCATTTTCTGTGTGTATGTTACATAATTGTTCTTGTTTTTAATCCACAATAATTCAAAGAAATTGCTTTCATGCTACGGTTAGACGAGCTAAAAGTGTGGATTAGCTTAAACATGTAAATGCTAGTGGGCATGTAGTAACTTGTATGCACTTCTACTTGTATATTCCTAGGGTATCATTCAACAAGTTAACTTGATTGAAGCTGAGCCATTTAAAACCTTCAGCTTAGAAATAGATATTAAAGTAAGACAAATTAAAGTGGGCCTTTAAGTTTATACGCTGTTTGGAATGAAGTCTGTAAAAATAGCATTCATAGATAAAGGGGGTGGGGGGGAAGTTAACAAAAAAAGCAGTCTCATACGAAGTTGTGTTGCTGCAAGGAAATAGCTAAATGATGCACTAGCAATTTGATGATTCTTTAAATTTGAGACATATTTGGTATACAGAAAAACACTTTTCTCATTTATACTTTTTATCACATAAAATAATCATAACATGTCATATGAATGGGAATTAGATTTCTATAAGACCAGAAAACGTTGTTCCCAGCAAGAAGACGATGAATTATGATTGTAAGTTGGCATAGTTTTGGAAAGAAATGGCAGATCTGGACATGTCTATTGGTTAAGGTTGACCTCGCCCAATTTTATTAGCTTGATCTCCTTTTCTCTTCATGGAAAATTAAATAAACGTCCAAGTTTTTGTGGCATCACAGAAACTTACATGTTAATTTTGTAAGTTTACTTCAAATCCTCAAAACCCTAACTTGGCAACAAAAAGAAAGAATGGTTATTTTGAAAACAGAGTTGCCACTTAATTTTGCAAGGCAATTATGAAAACCTTTAATTTTTAAAAAAAGATTCTAACAGAAAAATCTTTTCAAAATTTCAAAGATAGGGTTCCTATTAACATTTCGAGAAGGTTCTAAGCCCTTGAAATGTCTGCTTAACACATGGTTATCTGTTGATTTAACTAAACAATTATTTGACTAACTTAATTGATTGAAGAATTTCTTAAATTTTTTAATATGTGAAAGGAAAAAGTATTTTTGGCATTTTGTTGAAAAGAAAAGCTCTTTTGGACTGTTTGAAAAGAAAAACTCTTTTGAAACTCTCAAGGCAATCTAAGTTAATTTAAAACTTCAGTATTTAAGACAAATAAAATTACAAGGAACCAAAAATAAAACATAGCAACTCAAGGGGGATTCATCCAAGTTAGAATGAATGTTAGTATACAATACAATGAAATCAAGAAATAAGAGAAAATTTAAATTGGGCTCCTGAGACCCAATCTTTGCTACTAACAGATGATCTTCAGGCTCTATGCAGTATTACTGCTCCTACCCCATTTTATCTGCTCCTGCTGATGTAATTTCGGCCTCTGGACAGATTTATCTTCCATTTTCACACTGTTTGAGGCTGACTCAAAAGACATGTATTGAGCTTTAAGCAAATGCCAAAAATGATTGACTTAACTTAATGTCATACAATGCTTTGAAATTATGATAATAAAAATTTGAATAAGAACTCCATTTTTTGACCATTTTTGAGTTTTAACTCTATATCCAGATAATGAAATCATGCACCATACATATTTGATTCATATGTGTCAAATTAGAAACCTGGAACTTATCATACGTGTAAATCAAATTGAGTATTATGCTAACTAGAAGAATTAGTTTCCTCAAACCAAAGCTATCAGTCATACCAAATTCTATAGGTCACTAAGTTAACTTCAAATTCTTTCTCAAAATAAAATAAAATAGTTAACTTTAAATTGAAACATATCATAAAAATAAGATTTCATCTACTCTTAATCTACGAATTGAACATATCATAGAATAAGATATTCATCTACTCTTAATCCACTTTTAAAGTTACTAGATCAAATAATATTTTTACTTAGTAAGGAATTGACATGTTGCCAGGAAAATCTAAGACTCGATTTTTCAAAGATAGGCAAAATATCAGACAGGAAATAAACGCATAAGTGTCACTTTATTTTAAAGATGAGCTGATTTACGGGTGGAAAAAGGATGAGACGGACAGGAATTTGCCCGTGGATTTGGGATTTGCACATCCGAGGGTTGACTTGCGTTGAGCCTTGGTCTTCTTGTATCTTCAGCCGTTGCATTCCCAATATACGTTGATGTAGACATTATGAAATTCCCAATTTCTTGTATAATGGGTGGAAATAAAGTTTTCAAAGATGGGCGCTGAACCTTGGATAGGATGCCACGTATCTCGGCGTTGTTCGAACATACAAGGACTGATCTTTGATTTTCATTTATTCACGTTCACTCCAAGGGACAAAGTTCCATAAGTTTTGCTAATTTTGTTTTACATTGGTAAGATGATTATGCCATGACTTCTGAAGTGCTGACTCATGAATCATTATGTTGTTGGATGTAGTCCCGTCTCATTATTGAAATGTCATTCTGGTCATGCCCTTTCTTTAAGCAAATATATCCACATATTTATAAGTTAATGAAGTACTTTCCCCTTCAGTCTTAATTTTTTCATTTTGCTTCTTTTTGCTTACAGATAGCTGACATGGTGGCAGTGGCACATGTGATGAATGCAACTTTGGTAATTCCTCAATTGGACAAGCGTTCATTCTGGCAAGATTCAAGGTCATATTTTTTTCTGTACTGTATATCTTACAACTTCACATGGCTTGTCATTCTTTTAGAAATGTGTTTATATATGTAATGTATTGCTTAGATGGTGGTCTCCTTGTATGGACTTGTGCAGTCCCCTCCTCATGGGCTAGATTTTGAGGTTGAGTTAGGTCCAAGATTCATTTATTTACATGGTACCATAGCAGGACCCATCATACCCGATGTTGAGCCCCAAAATTAAATTGCCCATGCTCCAGCTGTCTGGTCTCTTTTTATGGATTTGGGCAATCCTCCACTCACGAGCTATCTTTTGAGGTTGAGTTAGGCCCAAGATCTATTTCTTTACAAGTTTAGACTCTGATATTTTTCTTGTTTCTTGTAAAATTTCTGATGAGTGCTTTGATCTCTACCAACTGCTTTTTTTTTTTCACTTTATCTAAACATACTTACTCTAGTTTGTTCTAATGGGCTAATGTACAGTACATTTTCAGATATATTTGATGAGAAC</genome_strand>
        <mrna_strand>ATTCGACTCTCTGAACTCTGAATCATCGAAAATTGTGTAATTTTGTAGCCATTGATGAGTCGAGGAGTGTGAAATTTTGTATAAGAAATGGGGAACAGAGGCCATACTCAGTACAGAACGACAAGGAGGACATCCAATTTCTCAATTACTCTCTACATTTTCCTCTTTTTTGTTTTGTCAATGTTCGTATTCTTTTATTACACTAAGGATATCGTAGAAGATGAACAAAAGCTTGTCTTGGCATCGGAGAAGAAGGAAGAGCCTGAATTCGATGAG............................................................................................................................................................................................................................................................................................................................................................................................................................................AATGAAGATAATTCTGTTTGGGAAGCTTCAAAGAGCCATGGTTTACATCCATGCATTAAGCCAACTGCAAAATACAAAG................................................................................................................................................................................................................................................................................................................................................................................................................CTGCTCTAGGGTGGAAACGCTACTTGACTGTAAAAAGTAATGGTGGATTAAATCAAATGAGGACGGGT..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAGCTGACATGGTGGCAGTGGCACATGTGATGAATGCAACTTTGGTTATTCCCTCATTGGACAAGCGTTCATTCTGGCAAGATTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATATATTTGATGAGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E355122" ref_strand="+" ref_description="SGN-E355122 [cTOS-18-H18]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtatttttcctcatcaagatgagtacaaaggaaagttcgcaccaaactg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="67407" stop="66077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67112" g_stop="66377" g_length="736"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="735" r_length="735" r_score="0.920"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E355122" ref_strand="+">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>736</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E355122" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67112" e_stop="66377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGTCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAATGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATCCACCGAAGGTCAACTGCTTATCTCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTACAAAGGAAAGTTCGCACCAAACTG</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGATGAGTACAAAGGAAAGTTCGCACCAAACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E350936" ref_strand="+" ref_description="SGN-E350936 [cTOS-7-D2]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcancaaagagtaagagccagaattttgaaagtggccagttggttcttaagcgtatttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="67407" stop="66117"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67112" g_stop="66417" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="695" r_length="695" r_score="0.911"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E350936" ref_strand="+">
        <total_alignment_score>0.911</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350936" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67112" e_stop="66417"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGTCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAATGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATCCACCGAAGGTCAACTGCTTATCTCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTC</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCANCAAAGAGTAAGAGCCAG-AATTTTGAAAGTGGCCAGTTGGTTCTTAAGCGTATTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E353644" ref_strand="+" ref_description="SGN-E353644 [cTOS-10-I24]">
      <seq>aaaagtgggaaatggatgtcattggtcctatagagccaaccgcttctaatggacacagattcattttggttgccactgattattttaccaagtgggttgaagcagcctcttacaagtcggtagccaagaaagtggtagccaattttgtccgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggtgcaaatctcaacagtcatctgatgaaagagatatgtgatcaattcaagattattcaccggaggtcaactgcttatcgccctcaaatgaacggagttgtagaggccgccaacaagaatatcaagaaaattttgaggaaaatgattgacaagcagcgaggttggcatgaaatattgtcgtatgctctactaggttatcgaacgacggtcagaacatcgactggggctactccatacttgctagtatacggaacagaagcagtcgtacctattgaagtcgacatgccgtcactaaggatcatccaagaagctgaattaagtaacgctgagtgggttagcaaacggattgatcaactaactttgattgatgagaagaggatggtcgctgtttgccattgccagttgtatagacaaagaatgactcgcgcttttcacaaaagagtaagagccagaattttgaagttggccagttggttcttaagcgtattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="67407" stop="66118"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67112" g_stop="66418" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="694" r_length="694" r_score="0.917"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E353644" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E353644" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67112" e_stop="66418"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGCTTGGGGAATGGATGTCATCGGTCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAATGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATCCACCGAAGGTCAACTGCTTATCTCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTT</genome_strand>
        <mrna_strand>AAAAGTGGGAAATGGATGTCATTGGTCCTATAGAGCCAACCGCTTCTAATGGACACAGATTCATTTTGGTTGCCACTGATTATTTTACCAAGTGGGTTGAAGCAGCCTCTTACAAGTCGGTAGCCAAGAAAGTGGTAGCCAATTTTGTCCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGATCAATTCAAGATTATTCACCGGAGGTCAACTGCTTATCGCCCTCAAATGAACGGAGTTGTAGAGGCCGCCAACAAGAATATCAAGAAAATTTTGAGGAAAATGATTGACAAGCAGCGAGGTTGGCATGAAATATTGTCGTATGCTCTACTAGGTTATCGAACGACGGTCAGAACATCGACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTATTGAAGTCGACATGCCGTCACTAAGGATCATCCAAGAAGCTGAATTAAGTAACGCTGAGTGGGTTAGCAAACGGATTGATCAACTAACTTTGATTGATGAGAAGAGGATGGTCGCTGTTTGCCATTGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAG-AATTTTGAAGTTGGCCAGTTGGTTCTTAAGCGTATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E707410" ref_strand="+" ref_description="SGN-E707410 [FA32DF11]">
      <seq>cgttttgagacgggtgccacctcacgaacttaacgctatgagttcaccttggccatttgtagcttggggaatggatgtcatcagttctatagagtctaccgcttctaatggacatagattcattttggttgccattgattatttcaccaagtgggtggaagcaaccccttacaagtcggtaaccaagaaagtggtggtcgattttgttcgcaacaatctgatatgcagatttggagttccagaatccatcattactgataacggggcaaatctcaacagtcatttgatgaaacagatatatgaacaatttaagttattcatcgaaagtcaactgcttatcgcccccaaatgaacagagctgtagaagccgccaacaaaaatatcaagaagattttgaggaaaatgattgacaaacagcggggttggcatgaaatgttgccatatgcttttctaggttatcgaacgacggtcagaacatcgacttgggctactccatacttgctagtatatggaacagaggcagtcgtgcctgttgaagtcgagataccgtcattgcggatcatccaagaagctgaattaagtaacgccgaatggcttagcaaacagattgatcaactagccttaattgataagaagagaatagttgcgtttgccatggcaagttgtacagacagagaatgactcgcgcttttcacaaaagagtaagagccaggaattttgaagttggtcagttggttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="67470" stop="66131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67171" g_stop="66431" g_length="741"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="739" r_length="739" r_score="0.900"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E707410" ref_strand="+">
        <total_alignment_score>0.900</total_alignment_score>
        <cumulative_length_of_scored_exons>741</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E707410" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67171" e_stop="66431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATTTGATAAGGGTGCCACCTCACGAACTCAATGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCGGTCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAATGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATCCACCGAAGGTCAACTGCTTATCTCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCT</genome_strand>
        <mrna_strand>CGTTTTGAGACGGGTGCCACCTCACGAACTTAACGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCAGTTCTATAGAGTCTACCGCTTCTAATGGACATAGATTCATTTTGGTTGCCATTGATTATTTCACCAAGTGGGTGGAAGCAACCCCTTACAAGTCGGTAACCAAGAAAGTGGTGGTCGATTTTGTTCGCAACAATCTGATATGCAGATTTGGAGTTCCAGAATCCATCATTACTGATAACGGGGCAAATCTCAACAGTCATTTGATGAAACAGATATATGAACAATTTAAG-TTATTCATCGAAAGTCAACTGCTTATCGCCCCCAAATGAACAGAGCTGTAGAAGCCGCCAACAAAAATATCAAGAAGATTTTGAGGAAAATGATTGACAAACAGCGGGGTTGGCATGAAATGTTGCCATATGCTTTTCTAGGTTATCGAACGACGGTCAGAACATCGACTTGGGCTACTCCATACTTGCTAGTATATGGAACAGAGGCAGTCGTGCCTGTTGAAGTCGAGATACCGTCATTGCGGATCATCCAAGAAGCTGAATTAAGTAACGCCGAATGGCTTAGCAAACAGATTGATCAACTAGCCTTAATTGATAAGAAGAGAATAGTTGC-GTTTGCCATGGCAAGTTGTACAGACAGAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGGAATTTTGAAGTTGGTCAGTTGGTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E243204" ref_strand="+" ref_description="SGN-E243204 [cLEE-2-O19]">
      <seq>aggctggttctgagttggatctatgtttgatgaagggaagtagaccggaggtcttgcatcagcaatattagtaccaaatccaggtggaggcgcatcctgtctccgttgcatttcaactttcatttcagcaatctgttgcatcagttgcatgatcaattcattctgttccactacagtgggctgagcgaccacaacgtcagtaagacgcccttcgtcattgttgtctcccataactgtttttcctttatctgaatttgatcgagggaaggaatctgtaggacctttcgatctggtgaagtaaggatgatctgccagctttattgacacagatcagtaaaaaggtacctgaaaggtaaaaacaactcaaaggcaaatttgttagtgcatatccagagtacaaaatgcttaatatcgcacataaaaccgataaacacacaagtcgttttgtttgaggatatcttaacccacgaataaggacggatatatattttgaacaaacaggaatttgtttgtttggcgttatcttgggaaatctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="72963" stop="74097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="73263" g_stop="73797" g_length="535"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="536" r_length="536" r_score="0.970"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E243204" ref_strand="+">
        <total_alignment_score>0.970</total_alignment_score>
        <cumulative_length_of_scored_exons>535</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243204" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="73263" e_stop="73797"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGCTGGTTCTGAGTTGGACCTATGTTTGATGAAGGGAAGTAGACGGGAGGTCTTGCATCAGCAGTATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGCTGCATGATCAATTCGTTCTGTTCCACTACAGTGGGCTGAGCCACCACAACGTCAGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTGTCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGT-AAAAGGTACCTGAGATGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCATAATATCGCACATAAAACAGATAAACACACAAGTCATTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAAGAATTTGTTTGTTTGGCGCTATCTTGGGAAATCTG</genome_strand>
        <mrna_strand>AGGCTGGTTCTGAGTTGGATCTATGTTTGATGAAGGGAAGTAGACCGGAGGTCTTGCATCAGCAATATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGTTGCATGATCAATTCATTCTGTTCCACTACAGTGGGCTGAGCGACCACAACGTCAGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTATCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGTAAAAAGGTACCTGAAAGGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCTTAATATCGCACATAAAACCGATAAACACACAAGTCGTTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAGGAATTTGTTTGTTTGGCGTTATCTTGGGAAATCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E577849" ref_strand="+" ref_description="SGN-E577849 [LE08AD09]">
      <seq>cgaaaatggaggcttgtagacgatttcttcttcatcatcctcctcagtcacttcacggtcggggccactgttatctgctcccagatcatgggcgaggtattttccgccctttgggtcgctatgggtcgccaattcctcgtcgagcgccgcgtttctgtccaacaacacagcagtctcgatatctatcttcgcctctctcgcctttccttcgtgtatctctaaacgaagcaagttcaaccttttccttaggctttcggtttccatctcaacctccttctttctctttatctgtgacgccagatcttcatccaatgttgtgaccgcagctttgtagatcgccgtggtcgcgtctactttgagtccttcttccttaaccttctgaatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="73801" stop="74786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="74101" g_stop="74486" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="386" r_length="386" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E577849" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>386</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E577849" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="74101" e_stop="74486"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTGCTCAGTCACTTCACGGTCGGGGCCACTGTTATCTGCTCCCAGATCATGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGCGTTTCTGCCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTCAACCTTTTCCTTAGGCTTACGGTTTCCATCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAGATCTTCATCCAAGGTTGTGACCGCAGCTTTGTAGATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCCTCCTTAACCCTCTGAATCT</genome_strand>
        <mrna_strand>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTCCTCAGTCACTTCACGGTCGGGGCCACTGTTATCTGCTCCCAGATCATGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGCGTTTCTGTCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCTAAACGAAGCAAGTTCAACCTTTTCCTTAGGCTTTCGGTTTCCATCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAGATCTTCATCCAATGTTGTGACCGCAGCTTTGTAGATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCTTCCTTAACCTTCTGAATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E335987" ref_strand="+" ref_description="SGN-E335987 [cTOE-6-J21]">
      <seq>ggaatttgaacaaccaatgtttagagaacaccacaacactaagaaatataaccatagtagttctattagtagtactgattcctctgttgcttcacatgaagatttgagaagtagaattgaatcatttcatgttagggaaaaagctatgtccaaaactgaatctgctgaaaaaaaactttcatggctacgttcacagattattggtgaaaatgtcgatttcgattcgccttttgggaaacgtaagcttacttatgctgatcatactgcctctggaagatcacttcaatatatcgaaaattatatcatgaataacgtccttgctttctatggtaatagtcatactagtgacagtcatgtgggatatcaaacgacgaaaatagtgcatgaagcagcagcttatgtgaagaaatgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="85974" stop="87079"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86274" g_stop="86602" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="0.982"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86603" i_stop="86696" i_length="94">
            <donor d_prob="0.967" d_score="0.96"/>
            <acceptor a_prob="0.988" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86697" g_stop="86779" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="330" r_stop="412" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E335987" ref_strand="+">
        <total_alignment_score>0.985</total_alignment_score>
        <cumulative_length_of_scored_exons>412</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E335987" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86274" e_stop="86602"/>
          <exon e_start="86697" e_stop="86779"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTTGAACAACCAATGTTTAGAGAACACCACAACACTAAGAAATATAACCATAGTAGTTCTATTAGTAGTACTGTTTCCTCTGTTGCTTCACATGAAGATTTGAGAAGTAGAATTGAATCATTTCATGTTAGGGAAAAAGCTATTTCCAAAACTGAATCTGCTGAAAAAAAACTTTCATGGTTACGTTCACAGATTATTGGTGAAAATGTCGATTTCGATTCGCCTTTTGGGAAACGTAGGCTTACTTATGCTGATCATACTGCCTCTGGAAGATCACTTCAATATATCGAAAATTATATCATCAATAACGTCCTTCCTTTCTATGGTATGTTCGTTTACCTTAGTAACTATGTACGTACGATACTCCTTTATCCTTAACCAGAAGGGAAAGATAACAACTATTGTATTATTTTGTACAGGTAATAGTCATACTAGTGACAGTCATGTGGGATATCAAACGACGAAAATAGTGCATGAAGCAGCAGCTTATGTGAAGAAATGC</genome_strand>
        <mrna_strand>GGAATTTGAACAACCAATGTTTAGAGAACACCACAACACTAAGAAATATAACCATAGTAGTTCTATTAGTAGTACTGATTCCTCTGTTGCTTCACATGAAGATTTGAGAAGTAGAATTGAATCATTTCATGTTAGGGAAAAAGCTATGTCCAAAACTGAATCTGCTGAAAAAAAACTTTCATGGCTACGTTCACAGATTATTGGTGAAAATGTCGATTTCGATTCGCCTTTTGGGAAACGTAAGCTTACTTATGCTGATCATACTGCCTCTGGAAGATCACTTCAATATATCGAAAATTATATCATGAATAACGTCCTTGCTTTCTATG..............................................................................................GTAATAGTCATACTAGTGACAGTCATGTGGGATATCAAACGACGAAAATAGTGCATGAAGCAGCAGCTTATGTGAAGAAATGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E397872" ref_strand="+" ref_description="SGN-E397872 [TUS-35-B12]">
      <seq>ctgaggttgtagagattgtattggacgataacgggctagtagatatggaagcattgagggatcagcttgagttgtataagtctacgaatagaccattgttgggttcgttctcagcttgtagaaatgttactgggacttattctgatacaagagccatcgctcgtttacttcataaaaatggagcttttgcttgctttgatttcgcagcaagtggtccatatgcgaaaatagagatgagatcaggagagatcgatggatatgatgctgtttttattagtcctcataaatttcttggaggtccaggcacacctggaattcttgtaatgaacaaagcactctatcgattgaggacttcacctccatctacttgtggaggtggtactgttgattttgttaacccgtacaatgaaaaggacacactttatgtggagaatattgaagaaagggaagacgctggtacaccgcccatcattcaaaaagtgagaacagcacttgcattttgggtgaaagagttcataagtcataaagtaattgaaagaatgggaacacacttacattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="86697" stop="88027"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86997" g_stop="87207" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87208" i_stop="87291" i_length="84">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87292" g_stop="87493" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="413" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87494" i_stop="87580" i_length="87">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87581" g_stop="87727" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="561" r_length="148" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E397872" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E397872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86997" e_stop="87207"/>
          <exon e_start="87292" e_stop="87493"/>
          <exon e_start="87581" e_stop="87727"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAGGTATGTTAATTGAGTTTGACTTTTGTATACTGACATACTAAGTATGTCGCGAAAAGATGACTAATATATGGTGTTATGTTGTAGTGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAGGTATGTATGTACTAAGTTGCGCGGACTCTTCATCTTCTGCTTAGCTCTCATGATAATTCTGAACTTGATATATAATAAAATAAACAGGACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAAT-GGAACACACTTACATTGAA</genome_strand>
        <mrna_strand>CTGAGGTTGTAGAGATTGTATTGGACGATAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGAAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAG....................................................................................TGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAG.......................................................................................GACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCCATCATTCAAAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGGAACACACTTACATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E395496" ref_strand="+" ref_description="SGN-E395496 [TUS-16-B12]">
      <seq>ctgaggttgtagagattggattggacgaaaacgggctagtagatatggaagcattgagggatcagcttgagttgtataagtctacgaatagaccattgttgggttcgttctcagcttgtagtaatgttactgggacttattctgatacaagagccatcgctcgtttacttcataaaaatggagcttttgcttgctttgatttcgcagcaagtggtccatatgcgaaaatagagatgagatcaggagagatcgatggatatgatgctgtttttattagtcctcataaatttcttggaggtccaggcacacctggaattcttgtaatgaacaaagcactctatcgattgaggacttcacctccatctacttgtggaggtggtactgttgattttgttaacccgtacaatgaaaaggacacactttatgtggagaatattgaagaaagggaatacgctggtacaccgccaatcattcataaagtgagaacagcacttgcattttgggtgaaagagttcataactcataaattaattgaaagaatggaacacacttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="86697" stop="88021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86997" g_stop="87207" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87208" i_stop="87291" i_length="84">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87292" g_stop="87493" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="413" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87494" i_stop="87580" i_length="87">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87581" g_stop="87721" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="554" r_length="141" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E395496" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395496" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86997" e_stop="87207"/>
          <exon e_start="87292" e_stop="87493"/>
          <exon e_start="87581" e_stop="87721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAGGTATGTTAATTGAGTTTGACTTTTGTATACTGACATACTAAGTATGTCGCGAAAAGATGACTAATATATGGTGTTATGTTGTAGTGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAGGTATGTATGTACTAAGTTGCGCGGACTCTTCATCTTCTGCTTAGCTCTCATGATAATTCTGAACTTGATATATAATAAAATAAACAGGACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGAACACACTTAC</genome_strand>
        <mrna_strand>CTGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAG....................................................................................TGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAG.......................................................................................GACACACTTTATGTGGAGAATATTGAAGAAAGGGAATACGCTGGTACACCGCCAATCATTCATAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAACTCATAAATTAATTGAAAGAATGGAACACACTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E205162" ref_strand="+" ref_description="SGN-E205162 [cLEC-16-F11]">
      <seq>tgaggttgtagagattggattggacgaaaacgggctagtagatatggaagcattgagggatcagcttgagttgtataagtctacgaatagaccattgttgggttcgttctcagcttgtagtaatgttactgggacttattctgatacaagagccatcgctcgtttacttcataaaaatggagcttttgcttgctttgatttcgcagcaagtggtccatatgcgaaaatagagatgagatcaggagagatcgatggatatgatgctgtttttattagtcctcataaatttcttggaggtccaggcacacctggaattcttgtaatgaacaaagcactctatcgattgaggacttcacctccatctacttgtggaggtggtactgttgattttgttaacccgtacaatgaaaaggacacactttatgtggagaatattgaagaaagggaagacgctggtacaccgccaatcattcagaaagtgagaacagcacttgcattttgggtgaaagagttcataagtcataaagtaattgaaagaatggaacacacttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="86698" stop="88021"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86998" g_stop="87207" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="87208" i_stop="87291" i_length="84">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="87292" g_stop="87493" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="412" r_length="202" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="87494" i_stop="87580" i_length="87">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="87581" g_stop="87721" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="553" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E205162" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205162" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86998" e_stop="87207"/>
          <exon e_start="87292" e_stop="87493"/>
          <exon e_start="87581" e_stop="87721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAGGTATGTTAATTGAGTTTGACTTTTGTATACTGACATACTAAGTATGTCGCGAAAAGATGACTAATATATGGTGTTATGTTGTAGTGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAGGTATGTATGTACTAAGTTGCGCGGACTCTTCATCTTCTGCTTAGCTCTCATGATAATTCTGAACTTGATATATAATAAAATAAACAGGACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGAACACACTTAC</genome_strand>
        <mrna_strand>TGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAG....................................................................................TGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAG.......................................................................................GACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGAACACACTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E398459" ref_strand="-" ref_description="SGN-E398459 [TUS-16-B12]">
      <seq>attgaaatgggctatactggagttaagccgggatggacaaggataagctttccctactacatgtcgaaagaagaatttgagttcattctagcagcattagaattcatatccatttatggacaaaggttccttcctttatacaatttcaattggaagagtggtgcttggactttcaaaaagaaagctttgaaagagacgcttacgagagggatggatcacaattgcaacttttgtggctcaccaatgatgaaggagttgaacttaggtggtgccaatacttgccatgataacacaaaagaaggatcatgcactaacagtaacaaagaaggcattatttataagtacgtaaagtatcttgagacagccaagcgcgtagctagcctccttcctaaattcccacagcagagaccaatacctgaagaactagacactaatcttgtgtcctttagagcctgataaaaatatgtatatgaaaataaactttgtccaatgtcttgttgggcaaattcgatcgtttgatatgtaataataacttcaaagtatatgtattcccttcgttttgtttttacttgttcagtatgtattttgtattttctttaagaaaaacataaagtattttttgatttctcattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="87828" stop="89061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88049" g_stop="88057" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="9" r_length="9" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="88058" i_stop="88138" i_length="81">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="88139" g_stop="88771" g_length="633"/>
          <reference_exon_boundary r_type="cDNA" r_start="10" r_stop="642" r_length="633" r_score="0.984"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E398459" ref_strand="-">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E398459" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="88049" e_stop="88057"/>
          <exon e_start="88139" e_stop="88771"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGAAATGGTGAGTTTCGATAAATAAAGGATTTTTACTTATGTACTATATAATTATCTTTTTAACGTTAACTTTTCACTTGATATATAGGGCTATACTGGAGTTAAGCCGGGATGGACAAGGATAAGCTTTCCCTACTACATGTCGAAAGAAGAATTTGAGTTCATTCTAGCAGCATTAGAATTCATATCCATTTATGGACAAAGGTTCCTTCCTTTATACAATTTCAATTGGAAGAGTGGTGCTTGGACTTTCAAAAAGAAAGCTTTGAAAGAGACGCTTACGAGAGGGATGGATCACAATTGCAACTTTTGTGGCTCACCAATGATGAAGGAGTTGAACTTAGGTGGTGCCAATACTTGCCATGATAACACAAAAGAAGGATCATGCACTAACAGTAACAAAGAAGGCATTATTTATAAGTACGTAAAGTATCTTGAGACAGCCAAGCGCGTAGCTAGCCTCCTTCCTAAATTCCCACAGCAGAGACCAATACCTGAAGAACTAGACACTAATCTTGTGTCCTTTAGAGCCTGATAAAAATATGTATATGAAAATAAACTTTGTCCAATGTCTTGTTGGGCAAATTCGATCGTTTGATATGTAATAATAACTTCAAAGTCTATGTATTCCCTTCGTTTTGTTTTTACTTGTTCAGTATGTATTTTGTATTTTCTTTAAGAAAAACATAAAGTATTTTTTGATTTCTCATTTGGTGTTGAT</genome_strand>
        <mrna_strand>ATTGAAATG.................................................................................GGCTATACTGGAGTTAAGCCGGGATGGACAAGGATAAGCTTTCCCTACTACATGTCGAAAGAAGAATTTGAGTTCATTCTAGCAGCATTAGAATTCATATCCATTTATGGACAAAGGTTCCTTCCTTTATACAATTTCAATTGGAAGAGTGGTGCTTGGACTTTCAAAAAGAAAGCTTTGAAAGAGACGCTTACGAGAGGGATGGATCACAATTGCAACTTTTGTGGCTCACCAATGATGAAGGAGTTGAACTTAGGTGGTGCCAATACTTGCCATGATAACACAAAAGAAGGATCATGCACTAACAGTAACAAAGAAGGCATTATTTATAAGTACGTAAAGTATCTTGAGACAGCCAAGCGCGTAGCTAGCCTCCTTCCTAAATTCCCACAGCAGAGACCAATACCTGAAGAACTAGACACTAATCTTGTGTCCTTTAGAGCCTGATAAAAATATGTATATGAAAATAAACTTTGTCCAATGTCTTGTTGGGCAAATTCGATCGTTTGATATGTAATAATAACTTCAAAGTATATGTATTCCCTTCGTTTTGTTTTTACTTGTTCAGTATGTATTTTGTATTTTCTTTAAGAAAAACATAAAGTATTTTTTGATTTCTCATTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E236200" ref_strand="+" ref_description="SGN-E236200 [cLED-20-B3]">
      <seq>atagggctatactggagttaagccgggatggacaaggataagctttccctactacatgtcgaaagaagaatttgagttcattctagcagcattagaattcatatccatttatggacaaaggttccttcctttatacaatttcaattggaagagtgatgcttggactttcaaaaagaaagctttgaaagagacgcttacgagagggatggatcacaattgcaacttttgtggctcaccaatgatgaaggagttgaacttaggtggtgccaatacttgccatgataacacaaaagaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="87835" stop="88730"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88135" g_stop="88430" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="296" r_length="296" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E236200" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>296</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E236200" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="88135" e_stop="88430"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAGGGCTATACTGGAGTTAAGCCGGGATGGACAAGGATAAGCTTTCCCTACTACATGTCGAAAGAAGAATTTGAGTTCATTCTAGCAGCATTAGAATTCATATCCATTTATGGACAAAGGTTCCTTCCTTTATACAATTTCAATTGGAAGAGTGGTGCTTGGACTTTCAAAAAGAAAGCTTTGAAAGAGACGCTTACGAGAGGGATGGATCACAATTGCAACTTTTGTGGCTCACCAATGATGAAGGAGTTGAACTTAGGTGGTGCCAATACTTGCCATGATAACACAAAAGAAG</genome_strand>
        <mrna_strand>ATAGGGCTATACTGGAGTTAAGCCGGGATGGACAAGGATAAGCTTTCCCTACTACATGTCGAAAGAAGAATTTGAGTTCATTCTAGCAGCATTAGAATTCATATCCATTTATGGACAAAGGTTCCTTCCTTTATACAATTTCAATTGGAAGAGTGATGCTTGGACTTTCAAAAAGAAAGCTTTGAAAGAGACGCTTACGAGAGGGATGGATCACAATTGCAACTTTTGTGGCTCACCAATGATGAAGGAGTTGAACTTAGGTGGTGCCAATACTTGCCATGATAACACAAAAGAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E392344" ref_strand="-" ref_description="SGN-E392344 [TUS-35-B12]">
      <seq>ccgggatggacaaggataagctttccctactacatgtcgaaagaagaatttgagttcattctagcagcattagaaattcatatccatttatggacaaaggttccttcctttatacaatttcaattggaagagtggtgcttggactttcaaaaagaaagctttgaaagagacgcttacgagagggatggatcacaattgcaacttttgtggctcaccaatgatgaaggagttgaacttaggtggtgccaatacttgccatgataacacaaaagaaggatcatgcactaacagtaacaaagaaggcattatttataagtacgtaaagtatcttgagacagccaagcgcgtagctagcctccttcctaaattcccacagcagagaccaatacctgaagaactagacactaatcttgtgtcctttagagcctgataaaaatatgtatatgaaaataaactttgtccaatgtcttgttgggcaaattcgatcgtttgatatgtaataataacttcaaagtatatgtattccctctcgttttgtttttacttgttcagataagtattttgtattttctttacgaaaaacataagagtattttatgatttctcattaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="87857" stop="89061"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="88157" g_stop="88758" g_length="602"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="610" polyA_stop="625"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E392344" ref_strand="-">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>602</cumulative_length_of_scored_exons>
        <coverage percentage="0.963" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E392344" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="88157" e_stop="88758"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCGGGATGGACAAGGATAAGCTTTCCCTACTACATGTCGAAAGAAGAATTTGAGTTCATTCTAGCAGCATTAG-AATTCATATCCATTTATGGACAAAGGTTCCTTCCTTTATACAATTTCAATTGGAAGAGTGGTGCTTGGACTTTCAAAAAGAAAGCTTTGAAAGAGACGCTTACGAGAGGGATGGATCACAATTGCAACTTTTGTGGCTCACCAATGATGAAGGAGTTGAACTTAGGTGGTGCCAATACTTGCCATGATAACACAAAAGAAGGATCATGCACTAACAGTAACAAAGAAGGCATTATTTATAAGTACGTAAAGTATCTTGAGACAGCCAAGCGCGTAGCTAGCCTCCTTCCTAAATTCCCACAGCAGAGACCAATACCTGAAGAACTAGACACTAATCTTGTGTCCTTTAGAGCCTGATAAAAATATGTATATGAAAATAAACTTTGTCCAATGTCTTGTTGGGCAAATTCGATCGTTTGATATGTAATAATAACTTCAAAGTCTATGTATTCCCT-TCGTTTTGTTTTTACTTGTTCAG-TATGTATTTTGTATTTTCTTTAAGAAAAACATAA-AGTATTTTTTGATTTCTC</genome_strand>
        <mrna_strand>CCGGGATGGACAAGGATAAGCTTTCCCTACTACATGTCGAAAGAAGAATTTGAGTTCATTCTAGCAGCATTAGAAATTCATATCCATTTATGGACAAAGGTTCCTTCCTTTATACAATTTCAATTGGAAGAGTGGTGCTTGGACTTTCAAAAAGAAAGCTTTGAAAGAGACGCTTACGAGAGGGATGGATCACAATTGCAACTTTTGTGGCTCACCAATGATGAAGGAGTTGAACTTAGGTGGTGCCAATACTTGCCATGATAACACAAAAGAAGGATCATGCACTAACAGTAACAAAGAAGGCATTATTTATAAGTACGTAAAGTATCTTGAGACAGCCAAGCGCGTAGCTAGCCTCCTTCCTAAATTCCCACAGCAGAGACCAATACCTGAAGAACTAGACACTAATCTTGTGTCCTTTAGAGCCTGATAAAAATATGTATATGAAAATAAACTTTGTCCAATGTCTTGTTGGGCAAATTCGATCGTTTGATATGTAATAATAACTTCAAAGTATATGTATTCCCTCTCGTTTTGTTTTTACTTGTTCAGATAAGTATTTTGTATTTTCTTTACGAAAAACATAAGAGTATTTTATGATTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E397872" ref_strand="+" ref_description="SGN-E397872 [TUS-35-B12]">
      <seq>ctgaggttgtagagattgtattggacgataacgggctagtagatatggaagcattgagggatcagcttgagttgtataagtctacgaatagaccattgttgggttcgttctcagcttgtagaaatgttactgggacttattctgatacaagagccatcgctcgtttacttcataaaaatggagcttttgcttgctttgatttcgcagcaagtggtccatatgcgaaaatagagatgagatcaggagagatcgatggatatgatgctgtttttattagtcctcataaatttcttggaggtccaggcacacctggaattcttgtaatgaacaaagcactctatcgattgaggacttcacctccatctacttgtggaggtggtactgttgattttgttaacccgtacaatgaaaaggacacactttatgtggagaatattgaagaaagggaagacgctggtacaccgcccatcattcaaaaagtgagaacagcacttgcattttgggtgaaagagttcataagtcataaagtaattgaaagaatgggaacacacttacattgaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="90790" stop="89459"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90490" g_stop="90280" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="0.986"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90279" i_stop="90195" i_length="85">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90194" g_stop="89993" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="413" r_length="202" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89992" i_stop="89906" i_length="87">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89905" g_stop="89759" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="561" r_length="148" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E397872" ref_strand="+">
        <total_alignment_score>0.975</total_alignment_score>
        <cumulative_length_of_scored_exons>560</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E397872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90490" e_stop="90280"/>
          <exon e_start="90194" e_stop="89993"/>
          <exon e_start="89905" e_stop="89759"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAGGTATGTTAATTGAGTTTGACTTTTATACACTGACAGTACTAAGTATGTCACGGAAATATGACTAATTTATGGTGTTATGTTGCAGTGGTCCATACGCGAAAATAGAGATGAGATCAGGAGAGATGGATGGATATGATGCTGTTTTTATTAGTCCTCATAAGTTTCTTGGAGGTCCAGGCACACCTGGAGTTCTTGTAATGAACAAAGCACTCTATAGATTGAGGACTTCGCCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCCTACAATGAAAAGGTATGTATGTACTAAGTTACGCGGACTCTTCATCTTCTGCTTAGCTCTCAAGATAATTCTGAACTTGATATATAATAAAATAAACAGGACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAAT-GGAACACACTTACATTGAA</genome_strand>
        <mrna_strand>CTGAGGTTGTAGAGATTGTATTGGACGATAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGAAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAG.....................................................................................TGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAG.......................................................................................GACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCCATCATTCAAAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGGAACACACTTACATTGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E395496" ref_strand="+" ref_description="SGN-E395496 [TUS-16-B12]">
      <seq>ctgaggttgtagagattggattggacgaaaacgggctagtagatatggaagcattgagggatcagcttgagttgtataagtctacgaatagaccattgttgggttcgttctcagcttgtagtaatgttactgggacttattctgatacaagagccatcgctcgtttacttcataaaaatggagcttttgcttgctttgatttcgcagcaagtggtccatatgcgaaaatagagatgagatcaggagagatcgatggatatgatgctgtttttattagtcctcataaatttcttggaggtccaggcacacctggaattcttgtaatgaacaaagcactctatcgattgaggacttcacctccatctacttgtggaggtggtactgttgattttgttaacccgtacaatgaaaaggacacactttatgtggagaatattgaagaaagggaatacgctggtacaccgccaatcattcataaagtgagaacagcacttgcattttgggtgaaagagttcataactcataaattaattgaaagaatggaacacacttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="90790" stop="89465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90490" g_stop="90280" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="211" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90279" i_stop="90195" i_length="85">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90194" g_stop="89993" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="413" r_length="202" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89992" i_stop="89906" i_length="87">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89905" g_stop="89765" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="414" r_stop="554" r_length="141" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E395496" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>554</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395496" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90490" e_stop="90280"/>
          <exon e_start="90194" e_stop="89993"/>
          <exon e_start="89905" e_stop="89765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAGGTATGTTAATTGAGTTTGACTTTTATACACTGACAGTACTAAGTATGTCACGGAAATATGACTAATTTATGGTGTTATGTTGCAGTGGTCCATACGCGAAAATAGAGATGAGATCAGGAGAGATGGATGGATATGATGCTGTTTTTATTAGTCCTCATAAGTTTCTTGGAGGTCCAGGCACACCTGGAGTTCTTGTAATGAACAAAGCACTCTATAGATTGAGGACTTCGCCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCCTACAATGAAAAGGTATGTATGTACTAAGTTACGCGGACTCTTCATCTTCTGCTTAGCTCTCAAGATAATTCTGAACTTGATATATAATAAAATAAACAGGACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGAACACACTTAC</genome_strand>
        <mrna_strand>CTGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAG.....................................................................................TGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAG.......................................................................................GACACACTTTATGTGGAGAATATTGAAGAAAGGGAATACGCTGGTACACCGCCAATCATTCATAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAACTCATAAATTAATTGAAAGAATGGAACACACTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E205162" ref_strand="+" ref_description="SGN-E205162 [cLEC-16-F11]">
      <seq>tgaggttgtagagattggattggacgaaaacgggctagtagatatggaagcattgagggatcagcttgagttgtataagtctacgaatagaccattgttgggttcgttctcagcttgtagtaatgttactgggacttattctgatacaagagccatcgctcgtttacttcataaaaatggagcttttgcttgctttgatttcgcagcaagtggtccatatgcgaaaatagagatgagatcaggagagatcgatggatatgatgctgtttttattagtcctcataaatttcttggaggtccaggcacacctggaattcttgtaatgaacaaagcactctatcgattgaggacttcacctccatctacttgtggaggtggtactgttgattttgttaacccgtacaatgaaaaggacacactttatgtggagaatattgaagaaagggaagacgctggtacaccgccaatcattcagaaagtgagaacagcacttgcattttgggtgaaagagttcataagtcataaagtaattgaaagaatggaacacacttac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="90789" stop="89465"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90489" g_stop="90280" g_length="210"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="210" r_length="210" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90279" i_stop="90195" i_length="85">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90194" g_stop="89993" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="211" r_stop="412" r_length="202" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="89992" i_stop="89906" i_length="87">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89905" g_stop="89765" g_length="141"/>
          <reference_exon_boundary r_type="cDNA" r_start="413" r_stop="553" r_length="141" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E205162" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E205162" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90489" e_stop="90280"/>
          <exon e_start="90194" e_stop="89993"/>
          <exon e_start="89905" e_stop="89765"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAGGTATGTTAATTGAGTTTGACTTTTATACACTGACAGTACTAAGTATGTCACGGAAATATGACTAATTTATGGTGTTATGTTGCAGTGGTCCATACGCGAAAATAGAGATGAGATCAGGAGAGATGGATGGATATGATGCTGTTTTTATTAGTCCTCATAAGTTTCTTGGAGGTCCAGGCACACCTGGAGTTCTTGTAATGAACAAAGCACTCTATAGATTGAGGACTTCGCCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCCTACAATGAAAAGGTATGTATGTACTAAGTTACGCGGACTCTTCATCTTCTGCTTAGCTCTCAAGATAATTCTGAACTTGATATATAATAAAATAAACAGGACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGAACACACTTAC</genome_strand>
        <mrna_strand>TGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAG.....................................................................................TGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAG.......................................................................................GACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGAACACACTTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E279268" ref_strand="+" ref_description="SGN-E279268 [cLEL-4-I14]">
      <seq>gcacgagaaaaaatatatatatttgaaaagcaaagtcaatatgtcttgtaatttccacttcttattgatccttgttttcttgatttcacttcatgaattaccaacaatttccaccacctcatcatcaattgatttgattcaaaaaacatgtaaaaacacaaaatactatgatctttgtgtatcatctctcaaatcagattccacaagcctcaaagcagacacaaaaggcttagcaactatcatggtcaaaattggaatggtcaatgccacagccacaaacaattttctttcatcacatgaattagtacttaacactactaataattacacaaataatgatttggtattaatgaagaaactcatcaaagattgtgctgataaatatgcattagctactaatgcacttcaagattcacttcaagatttgaatattgaaagtttatgactatgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="97347" stop="98396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97647" g_stop="98096" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E279268" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E279268" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="97647" e_stop="98096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAGGA-AAAAAATATATATATTTGAAAAGCAAAGTCAATATGTCTTGTAATTTCCACTTCTTATTGATTCTTGTTTTCTTGATTTCACTTCATGAATTACCAACAATTTCCACCACCTCATCATCAATTGATTTGATTCAAAAAACATGTAAAAACACAAAATACTATGATCTTTGTGTATCATCTCTCAAATCAGATTCCACAAGCCTCAAAGCAGACACAAAAGGCTTAGCAACTATCATGGTCAAAATTGGAATGGTCAATGCCACAGCCACAAACAATTTTCTTTCATCACATGAATTAGTACTTAACACTACTAATAATTACACAAATAATGATTTGGTATTAATGAAGAAACTCATCAAAGATTGTGCTGATAAATATGCATTAGCTACTAATGCACTTCAAGATTCACTTCAAGATTTGAATAATG-AAGTTTATGACTATGCT</genome_strand>
        <mrna_strand>GCACGAGAAAAAATATATATATTTGAAAAGCAAAGTCAATATGTCTTGTAATTTCCACTTCTTATTGATCCTTGTTTTCTTGATTTCACTTCATGAATTACCAACAATTTCCACCACCTCATCATCAATTGATTTGATTCAAAAAACATGTAAAAACACAAAATACTATGATCTTTGTGTATCATCTCTCAAATCAGATTCCACAAGCCTCAAAGCAGACACAAAAGGCTTAGCAACTATCATGGTCAAAATTGGAATGGTCAATGCCACAGCCACAAACAATTTTCTTTCATCACATGAATTAGTACTTAACACTACTAATAATTACACAAATAATGATTTGGTATTAATGAAGAAACTCATCAAAGATTGTGCTGATAAATATGCATTAGCTACTAATGCACTTCAAGATTCACTTCAAGATTTGAATATTGAAAGTTTATGACTATGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E267214" ref_strand="-" ref_description="SGN-E267214 [cLEI-4-M20]">
      <seq>cacatgaattagtacttaacactactaataattacacaaataatgatttggtattaatgaagaaactcatcaaagattgtgctgataaatatgcattagctactaatgcacttcaagattcacttcaagatttgaataatgaagtttatgactatgcttacatgcatgttatggcggctgcggattatcctaacgtttgtcataatggatttaagaggaatccaagattggattatccaactcaacttgctattagggaagatggatttaaacatatttgtgatgtggttttaggtattcttgatgctcttggttggtgaaaaaaaataatcccctttttttttttttatgttatatgatatgtaaactttttctattattatatatgtgtttagtttgtctttatctatgtgtagatttaaagaaatgaggatttgtatgttgcctttaattgttcactctttttatgtattgagagtttacctttttatgcaaaaaaaaaaaaaaaaaactcgagactagttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="97639" stop="98733"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="97939" g_stop="98434" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="496" r_length="496" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="497" polyA_stop="512"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E267214" ref_strand="-">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.943" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E267214" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="97939" e_stop="98434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACATGAATTAGTACTTAACACTACTAATAATTACACAAATAATGATTTGGTATTAATGAAGAAACTCATCAAAGATTGTGCTGATAAATATGCATTAGCTACTAATGCACTTCAAGATTCACTTCAAGATTTGAATAATGAAGTTTATGACTATGCTTACATGCATGTTATGGCGGCTGCGGATTATCCTAACGTTTGTCATAATGGATTTAAGAGGAATCCAAGATTGGATTATCCAACTCAACTTGCTATTAGGGAAGATGGATTTAAACATATTTGTGATGTGGTTTTAGGTATTCTTGATGCTCTTGGTTGGTGAAAAAAAATAATCCCCTTTTTTTTTTTTTATGTTATATGATATGTAAACTTTTTCTATTATTATATATGTGTTTAGTTTGTCTTTATCTATGTGTAGATTTAAAGAAATGAGGATTTGTATGTTGCCTTTAATTGTTCACTCTTTTTATGTATTGAGAGTTTACCTTTTTATGCAAG</genome_strand>
        <mrna_strand>CACATGAATTAGTACTTAACACTACTAATAATTACACAAATAATGATTTGGTATTAATGAAGAAACTCATCAAAGATTGTGCTGATAAATATGCATTAGCTACTAATGCACTTCAAGATTCACTTCAAGATTTGAATAATGAAGTTTATGACTATGCTTACATGCATGTTATGGCGGCTGCGGATTATCCTAACGTTTGTCATAATGGATTTAAGAGGAATCCAAGATTGGATTATCCAACTCAACTTGCTATTAGGGAAGATGGATTTAAACATATTTGTGATGTGGTTTTAGGTATTCTTGATGCTCTTGGTTGGTGAAAAAAAATAATCCCCTTTTTTTTTTTTTATGTTATATGATATGTAAACTTTTTCTATTATTATATATGTGTTTAGTTTGTCTTTATCTATGTGTAGATTTAAAGAAATGAGGATTTGTATGTTGCCTTTAATTGTTCACTCTTTTTATGTATTGAGAGTTTACCTTTTTATGCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E709462" ref_strand="+" ref_description="SGN-E709462 [FA52AE03]">
      <seq>cgctttattttacccaagcgttacttgtaatacgaaagaaacaaatccctacaccacaaacatcttttatcacttcttggtcgatagatgcatcttcttgattaatcagaatacattatttcctgtgggatcttgctgtcattgttctgttactgtaatcacactcatgaacgtgtggcatcagcacttgacgtgaaggattactttcatgatctgcagcctctccatctactacttcagtgactatagaaatgaagccaagaaccaacggggtgtcaaggtcccacaagtccaatggcgttcacagtgagggtcctaactgggccataattgcaggtagcgcgttattacgtacattatctgtacgcttaggctacaagctgaacccacgtgcttgattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="101119" stop="105216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101418" g_stop="101526" g_length="109"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="109" r_length="109" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101527" i_stop="103968" i_length="2442">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103969" g_stop="104057" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="110" r_stop="198" r_length="89" r_score="0.978"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104058" i_stop="104714" i_length="657">
            <donor d_prob="0.978" d_score="0.96"/>
            <acceptor a_prob="0.550" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104715" g_stop="104916" g_length="202"/>
          <reference_exon_boundary r_type="cDNA" r_start="199" r_stop="401" r_length="203" r_score="0.946"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E709462" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>400</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E709462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101418" e_stop="101526"/>
          <exon e_start="103969" e_stop="104057"/>
          <exon e_start="104715" e_stop="104916"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCTTTACTTTACCCAAGCGTTACTTGTAATACGAAAGAAACAAAACCCTACACCAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAGGTACTTTTTTGATGTACCCTTTTCGTTTTCTTGAATTTTAATGATGGGAATTTCATCTTGTGTTGGTTATGGTATCTGAGCTGTGTAGAAATTTGTTTGGGTGTTTGAATTTCATGTTTGCATTAGCTATGGTCTCTGAATTGTGCAGAAATTAGTTCTGCGTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGTATAGTCCAAGGATTGGGGAGGTTTTTTTCTTTTTGATATATATATAGCCTTTTGTGTCTTTGAATTTCATTTTGCATTGGCTATGGTCTCAGAAGTCCAAGGATTGGGGAGCTTAGCTTTGTTTTTTATAAATAAATTTTCGGGTCTTTGAATTTCATTTTGCATTGGGTATAGTCTCTGAACTGTGCAGAAATTAGTTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGATTAGAACAAGGATTGAGGAGCTTTTTTTTTTTATATATATATATAACCTTTTCGGGAATTTTTTGTGTGGGTAGTTTCATGTAACATTTGTTATGACCTGGTTAAGTATATGAAAATAAATGGTGTTTTTGTGTGTACTTGTGTTCTGTTTTTGTGATTGAATCTGTGGGTTTATGTTTCAGTTTTGTTTTCGTGAATTAGAGGTTTTATAGGTGCTCTTTTTTGTTGTATGGTAAGTCGGAGATAGCTAGAGTAGGTGGGTGATTGAATGTGATGTTGAAGGCACCTGTGTCTCAATGAGCCATTTGATATCCTAATGACCAACGAGGTGAACAATCTTTTAAATAGAGGAAGTTCAAAAGAAAGAGATGGACGACATATCTCAATTTCAATTTGTTAGACTAGGCAGCACATGTTTGTCATGGGATTGCAGATGTCGTACTGTGTGTCTTATATATTTGAGTTTGACTTTCTTTTTATTTAAAAGGTATAGTGTATTTCATTAGTAGCAATCAAGGAAGCAATCTATGTGAAGATAGTGCTTATGTAATGTGTGTTTAATGTGTTGCTTGTTAAAACTTCTGAATGCCACACTATCAGTAAGTATTTAACTTTCTCCTCCTTAGGCTAGAAGCAACTTCTAAGCTATGTTTTCCTTAGCAACTTTTAATTCTCATGTAACGACTTTTCGAGATTGCTTGTTCTGGTTTTATATGATCTAGTACAATCTATCTTGTGATGGAAGACTATTAAATAGATAATTGCATAATTGGGTTAGGTTAGTCATCAACTTCGAAAGTAAATGACTCCAATCTTATTGTCCGCTCATGCAAAAAGCTAGACTTTCTTGTCACTGTTTTCTTGCCTTTTCGTCATCTGAAGTCTAAACTCCAGGGAACTTTTATATGTTTCCAATTTCCTTATATCATTGTCACTCCGAATCTGCTAGTCTGCTAGTCTTCTAGTCTTCATGTGGATGGCTCTTATAGGCTTACTGCTTTGGTCTTATACGTGGAAAGCCTGACTCAGTAATCCTGTTAGCCATTTCAACTTCAGGTCTTCTTCCCTATATTGTCTCTGTCGTGTGTGTGTACTGTGTGACTTATATACTGCTGGTGCTATCAAGGTTCGAGTTTTACTCCGCGTTAAAGAATAATATATTTAGTTCTGGGCGCCATTTTGATTGTCGTAATCTGAATTAGCCATTTTAAGTAGAGGATCCAAGTTTGACACTATTAATTATGCTTTATTAGGTGCAATATTGTCATCGAAACTAGGACTATTCTGTTTTGTGGTTCAGGGGGAAGGAATATACCGTCGAATTTTAGGCCTTCTCTGATCGTTGTAAACCAATAATTTTTCTCTTTCCTTCAGATTTTCCTTGGATGAATAATTTCCTTTTTTTTTTCTCAAGCAACTTTCTCGTTAATTAGCTGACTATCCTGCCTTAGAGAATTATCTTCATGAACTGAGATTCCTTCCCCGTGTTACTTCTTCCTTCAAAATATTCAATTATCAATGGATATCTTAATTCACTGCGAAGAGGTTGGAAATGACCTTACAGCTTCCTCTTCTGCAACACATCAACCTTCTCCGTAGCTGTTATTTTTTGGATTCTTTGCTTTACCCTCATAAAGGTATTCGCAGCTGCATAGTTTATAGAGGAAGAACGAAACTGGTAAGGCCTCGACTGAGAGTAGCAGATGCAGTTACTGGTTTTAAGTTGTCACCATTTGTTTGAGTGACCTTGTGAAATGTGAACTATTGATTGATGCTATAAACTAATATCAATGATCCAAGTGAATGTAACTAATATCCTGAATGAGCAGTGTATTCCGAACATACAGCTTATTTAAATGAGCAAGCATGCAATAGGTTGCCGTAAATGCAATGCCAGCAGATCTGTCTACATGATCTTTTTTCTATTTGTACTTTAATTAATTATTTCTTCCCTTATTATACTGTCCTTATGGGTTATCGGTGCTGTACTTCCATTGCTTTTTCTTTCAGAATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAGGTATCCATGCTATCAGAATTGTATGATTGCAGTTAGTTTTCCTTCTGTGAACTAGGAATGTGTTGCTTGTTCTACACTTTGGTACTTATTCTTATGGGAATTTTGTTGCTTGTGCTACACTCTGGTACTTATTCTTCTGGTATCTTTTAGGAAAAAAGGGAAATAAAGTACAGATGTGAAACACACTATCAAGGATATGGAAACAAATTAATTATACATGTCCACCTATAGGTATTATAGAAAACTCCAGATCCTCCTTCAAATAGCTTACTTTACTTTTTGAGAACTTCAATAGCTTACTCTTTATTCCAGGAAAAAAAACTTCATTTCTCCCCTTCAGTCAAAAGCTCCAAATATTTTTGCCATTACAGATCCCACTTTTCATATATAAAGTATTGGCAATTTTATAAATAAAATGACTCAGAAAATCTACTCACGTGGAGCTAAACAGATACCATACTATATGTGGACAGCTTGACCTTGCATTTTCTGAGTCTTTTTCACTATCAAATGCCTGTTATGGCCTTGTTTGGCTGCAAAGTTTATTGTAGTTATAATGTTATATTTTTCAACAGCCTATAAGCATACTGATTTGAGTGCTCAGGTATTTGTGCTTCTCCTGGCATATATTGACGTTATTCCACATTTGCTATATAGGATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAA-GCAGGTGCTTGATTC</genome_strand>
        <mrna_strand>CGCTTTATTTTACCCAAGCGTTACTTGTAATACGAAAGAAACAAATCCCTACACCACAAACATCTTTTATCACTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCACACTCATGAACGTGTGGCATCAGCACTTGACGTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCACAAGTCCAATGGCGTTCACAGTGAGGGTCCTAACTGGGCCATAATTGCAGGTAGCGCGTTATTACGTACATTATCTGTACGCTTAGGCTACAAGCTGAACCCACGTGCTTGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E727658" ref_strand="+" ref_description="SGN-E727658 [LA15BD06]">
      <seq>ctttacccaagcgttacttgtaatacgaaagaaacaaaaccctacaccagaaacatcttttatcagttcttggtcgatagatgcatcttcttgattaatcagaatacattatttcctgtgggatcttgctgtcattgttctgttactgtaatcagactcatgaaggtgtggcatcagcacttgacgtgaaggattactttcatgatctgcagcctctccatctactacttcagtgactatagaaatgaagccaagaaccaacggggtgtcaaggtcccagaagtccaatggtgttcagagtgagggtcctaactgggtcataattgcaggtagtgcgttattaagtacattatctgtacgcttagggtacaagctgaagcaggtgcttgattcaagacagccaaacaagacgaccagcagtttgaaaggaaatgaaaagtcttctgatggaagtaagttagggaatggtcatatgcagtcaagcacttactatttttcccaagatgatgatggctgctacaattgcaacacggaagctggaggattaggaattacaaagcagcagtataatgggtctgagcctgaaatggtgctccctctggtggcagttcctgccatcggattcaataaagagaatggtggggtttggtcaacctctcctgaccgtcttgaactaccacagaaaccatttcatcgctctaacagctctgagtcaccatgtgtctctgaatccggttctgacatatacagcaagcgagaagtgatacaaaagctgaggctacagttaaagagaaaggacgaaacaatattagagatgcaagaacagattgtagagttgcaagcttctctcaatgctcagatgtcgcattctgctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="101125" stop="106761"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101425" g_stop="101526" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101527" i_stop="103968" i_length="2442">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103969" g_stop="104057" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="191" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104058" i_stop="104714" i_length="657">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.550" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104715" g_stop="104951" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="428" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104952" i_stop="105032" i_length="81">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105033" g_stop="105137" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="533" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105138" i_stop="106118" i_length="981">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106119" g_stop="106461" g_length="343"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="876" r_length="343" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E727658" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>876</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E727658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101425" e_stop="101526"/>
          <exon e_start="103969" e_stop="104057"/>
          <exon e_start="104715" e_stop="104951"/>
          <exon e_start="105033" e_stop="105137"/>
          <exon e_start="106119" e_stop="106461"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTACCCAAGCGTTACTTGTAATACGAAAGAAACAAAACCCTACACCAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAGGTACTTTTTTGATGTACCCTTTTCGTTTTCTTGAATTTTAATGATGGGAATTTCATCTTGTGTTGGTTATGGTATCTGAGCTGTGTAGAAATTTGTTTGGGTGTTTGAATTTCATGTTTGCATTAGCTATGGTCTCTGAATTGTGCAGAAATTAGTTCTGCGTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGTATAGTCCAAGGATTGGGGAGGTTTTTTTCTTTTTGATATATATATAGCCTTTTGTGTCTTTGAATTTCATTTTGCATTGGCTATGGTCTCAGAAGTCCAAGGATTGGGGAGCTTAGCTTTGTTTTTTATAAATAAATTTTCGGGTCTTTGAATTTCATTTTGCATTGGGTATAGTCTCTGAACTGTGCAGAAATTAGTTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGATTAGAACAAGGATTGAGGAGCTTTTTTTTTTTATATATATATATAACCTTTTCGGGAATTTTTTGTGTGGGTAGTTTCATGTAACATTTGTTATGACCTGGTTAAGTATATGAAAATAAATGGTGTTTTTGTGTGTACTTGTGTTCTGTTTTTGTGATTGAATCTGTGGGTTTATGTTTCAGTTTTGTTTTCGTGAATTAGAGGTTTTATAGGTGCTCTTTTTTGTTGTATGGTAAGTCGGAGATAGCTAGAGTAGGTGGGTGATTGAATGTGATGTTGAAGGCACCTGTGTCTCAATGAGCCATTTGATATCCTAATGACCAACGAGGTGAACAATCTTTTAAATAGAGGAAGTTCAAAAGAAAGAGATGGACGACATATCTCAATTTCAATTTGTTAGACTAGGCAGCACATGTTTGTCATGGGATTGCAGATGTCGTACTGTGTGTCTTATATATTTGAGTTTGACTTTCTTTTTATTTAAAAGGTATAGTGTATTTCATTAGTAGCAATCAAGGAAGCAATCTATGTGAAGATAGTGCTTATGTAATGTGTGTTTAATGTGTTGCTTGTTAAAACTTCTGAATGCCACACTATCAGTAAGTATTTAACTTTCTCCTCCTTAGGCTAGAAGCAACTTCTAAGCTATGTTTTCCTTAGCAACTTTTAATTCTCATGTAACGACTTTTCGAGATTGCTTGTTCTGGTTTTATATGATCTAGTACAATCTATCTTGTGATGGAAGACTATTAAATAGATAATTGCATAATTGGGTTAGGTTAGTCATCAACTTCGAAAGTAAATGACTCCAATCTTATTGTCCGCTCATGCAAAAAGCTAGACTTTCTTGTCACTGTTTTCTTGCCTTTTCGTCATCTGAAGTCTAAACTCCAGGGAACTTTTATATGTTTCCAATTTCCTTATATCATTGTCACTCCGAATCTGCTAGTCTGCTAGTCTTCTAGTCTTCATGTGGATGGCTCTTATAGGCTTACTGCTTTGGTCTTATACGTGGAAAGCCTGACTCAGTAATCCTGTTAGCCATTTCAACTTCAGGTCTTCTTCCCTATATTGTCTCTGTCGTGTGTGTGTACTGTGTGACTTATATACTGCTGGTGCTATCAAGGTTCGAGTTTTACTCCGCGTTAAAGAATAATATATTTAGTTCTGGGCGCCATTTTGATTGTCGTAATCTGAATTAGCCATTTTAAGTAGAGGATCCAAGTTTGACACTATTAATTATGCTTTATTAGGTGCAATATTGTCATCGAAACTAGGACTATTCTGTTTTGTGGTTCAGGGGGAAGGAATATACCGTCGAATTTTAGGCCTTCTCTGATCGTTGTAAACCAATAATTTTTCTCTTTCCTTCAGATTTTCCTTGGATGAATAATTTCCTTTTTTTTTTCTCAAGCAACTTTCTCGTTAATTAGCTGACTATCCTGCCTTAGAGAATTATCTTCATGAACTGAGATTCCTTCCCCGTGTTACTTCTTCCTTCAAAATATTCAATTATCAATGGATATCTTAATTCACTGCGAAGAGGTTGGAAATGACCTTACAGCTTCCTCTTCTGCAACACATCAACCTTCTCCGTAGCTGTTATTTTTTGGATTCTTTGCTTTACCCTCATAAAGGTATTCGCAGCTGCATAGTTTATAGAGGAAGAACGAAACTGGTAAGGCCTCGACTGAGAGTAGCAGATGCAGTTACTGGTTTTAAGTTGTCACCATTTGTTTGAGTGACCTTGTGAAATGTGAACTATTGATTGATGCTATAAACTAATATCAATGATCCAAGTGAATGTAACTAATATCCTGAATGAGCAGTGTATTCCGAACATACAGCTTATTTAAATGAGCAAGCATGCAATAGGTTGCCGTAAATGCAATGCCAGCAGATCTGTCTACATGATCTTTTTTCTATTTGTACTTTAATTAATTATTTCTTCCCTTATTATACTGTCCTTATGGGTTATCGGTGCTGTACTTCCATTGCTTTTTCTTTCAGAATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAGGTATCCATGCTATCAGAATTGTATGATTGCAGTTAGTTTTCCTTCTGTGAACTAGGAATGTGTTGCTTGTTCTACACTTTGGTACTTATTCTTATGGGAATTTTGTTGCTTGTGCTACACTCTGGTACTTATTCTTCTGGTATCTTTTAGGAAAAAAGGGAAATAAAGTACAGATGTGAAACACACTATCAAGGATATGGAAACAAATTAATTATACATGTCCACCTATAGGTATTATAGAAAACTCCAGATCCTCCTTCAAATAGCTTACTTTACTTTTTGAGAACTTCAATAGCTTACTCTTTATTCCAGGAAAAAAAACTTCATTTCTCCCCTTCAGTCAAAAGCTCCAAATATTTTTGCCATTACAGATCCCACTTTTCATATATAAAGTATTGGCAATTTTATAAATAAAATGACTCAGAAAATCTACTCACGTGGAGCTAAACAGATACCATACTATATGTGGACAGCTTGACCTTGCATTTTCTGAGTCTTTTTCACTATCAAATGCCTGTTATGGCCTTGTTTGGCTGCAAAGTTTATTGTAGTTATAATGTTATATTTTTCAACAGCCTATAAGCATACTGATTTGAGTGCTCAGGTATTTGTGCTTCTCCTGGCATATATTGACGTTATTCCACATTTGCTATATAGGATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAGGTCCTACATTGTTTAAAGCAATTTGGTTTGTCTTGTAAAATTATTTTGCCTCTTAGATATGAGAAATGGCTTAAATTGTAGGAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGATGGCTGCTACAATTGCAACACGGGTATGCAAATTCTTGCCATCCCTTTGATGTTTTATCTTAGAATTTAGGTTGTTCTTTTTGGTGTAAAGAACGTGGCTAGTGATTTGATGTTGTCATCATCTTTTTCCTGTACTCCTGTTGATTGTAACTCCCAAATTTGCGAGAGAATGATTTGAACAAGTAAAGTTAATCACAGAGGCATCATCAACAATGTTTACATGTTAGTGTTGATTATTTGGTTGCTTTCTAACATGAAAATGAGACACGACACTCTTCAGAATTTAGACCTGTTTACAGTTATCTTACTCGCTTTAAGAAGTTTATGGTAATGTCAAGTGAAAGATTGAAACTGAGCTTATGTGATCAATATGATGATTTTCTTGGTATACACTATGCTGATTTTTCTTCAAAAACAGAAGGTTAATAAATTACCACTGCAGTTAGTCCAACAGCTAACCTTAAGGAAATAAAGAGTCATGGGAAAAGTCGAGTTCTATTTATGTCTAACCTTTTTGTTCCCATTTTGCTCATGCTTATTATTTGATCTTATGGTCCAGTTTGTTTGCTGAAATGTATACTACAACATCTTATGGGGTGTCACTGTTTCCTGCCATATTATGGGGCATGATTTGGGGTATCTCTGTTGGTGGCTCATGCAACTTACGTGTAGCCTAGTTCAACGTACAATTTTCTGGGAACTGCTAAGGTTTCTTTTTTCTCCCATTAGAACTCTTAAAGAGCCCTCAGGCCTTCAGTCTAGTGGACGCAACACAAGTTGTGTGAATAGGTCCTCTAGTTTTTTAGGTATCATTTGGTGGATTAGCTGACAATTCAGTATTTCTTGTGTTTTTTGAGTTTTGTTTTCATCTTATTATTTTTCTCAAGATTAGTGTGCTTGAAATGGTGTGATTAAATGTGCTTCCATCTCTTGTACATCTTACAATAGTCTATTAACTATTGTTGGCTACTTTTAGTGAACATTTGCTATTTTTATACTGACAGAAGCTGGAGGATTAGGAATTACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGTGCTCCCTCTGGTGGCAGTTCCTGCCATCGGATTCAATAAAGAGAATGGTGGGGTTTGGTCAACCTCTCCTGACCGTCTTGAACTACCACAGAAACCATTTCATCGCTCTAACAGCTCTGAGTCACCATGTGTCTCTGAATCCGGTTCTGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGTTAAAGAGAAGGGACGAAACAATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCA</genome_strand>
        <mrna_strand>CTTTACCCAAGCGTTACTTGTAATACGAAAGAAACAAAACCCTACACCAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAG.................................................................................GAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGATGGCTGCTACAATTGCAACACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGGAGGATTAGGAATTACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGTGCTCCCTCTGGTGGCAGTTCCTGCCATCGGATTCAATAAAGAGAATGGTGGGGTTTGGTCAACCTCTCCTGACCGTCTTGAACTACCACAGAAACCATTTCATCGCTCTAACAGCTCTGAGTCACCATGTGTCTCTGAATCCGGTTCTGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGTTAAAGAGAAAGGACGAAACAATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E476730" ref_strand="+" ref_description="SGN-E476730 [cSTB-45-F12]">
      <seq>acaaaaccctactttttcatatacccttatcagttcttggtcgatagatgcatcttcttgattaatcagaatacattatttcctgtgggatcttgctgtcattgtaccgttaccgtaatcagactcatgaaggtgtggcatcagcacttgacgtgaaggattactttcatgaactgcagcctctccatctactacttcagtgacgatagaaatgaagccaagaaccaacggggggtcaaggtcccagaagtccaatggtgttcagagtgagggtcctaactgggtcataattgcaggtagtgcgttattaagtacattatctgtacgcttaggctacaagctgaagcaggtgcttgattcaagacagccgaacaagacgaccagcagtttgaaaggaaatgaaaagtcttctgatggaagtaagttagggaatggtcatatgcagtcaagcacttacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="101177" stop="105396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101458" g_stop="101526" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="0.826"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101527" i_stop="103968" i_length="2442">
            <donor d_prob="0.988" d_score="0.88"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103969" g_stop="104057" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="158" r_length="89" r_score="0.966"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104058" i_stop="104714" i_length="657">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.550" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104715" g_stop="104951" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="159" r_stop="395" r_length="237" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104952" i_stop="105032" i_length="81">
            <donor d_prob="0.955" d_score="0.98"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105033" g_stop="105096" g_length="64"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="459" r_length="64" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E476730" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>459</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E476730" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101458" e_stop="101526"/>
          <exon e_start="103969" e_stop="104057"/>
          <exon e_start="104715" e_stop="104951"/>
          <exon e_start="105033" e_stop="105096"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAAAACCCTACACCAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAGGTACTTTTTTGATGTACCCTTTTCGTTTTCTTGAATTTTAATGATGGGAATTTCATCTTGTGTTGGTTATGGTATCTGAGCTGTGTAGAAATTTGTTTGGGTGTTTGAATTTCATGTTTGCATTAGCTATGGTCTCTGAATTGTGCAGAAATTAGTTCTGCGTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGTATAGTCCAAGGATTGGGGAGGTTTTTTTCTTTTTGATATATATATAGCCTTTTGTGTCTTTGAATTTCATTTTGCATTGGCTATGGTCTCAGAAGTCCAAGGATTGGGGAGCTTAGCTTTGTTTTTTATAAATAAATTTTCGGGTCTTTGAATTTCATTTTGCATTGGGTATAGTCTCTGAACTGTGCAGAAATTAGTTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGATTAGAACAAGGATTGAGGAGCTTTTTTTTTTTATATATATATATAACCTTTTCGGGAATTTTTTGTGTGGGTAGTTTCATGTAACATTTGTTATGACCTGGTTAAGTATATGAAAATAAATGGTGTTTTTGTGTGTACTTGTGTTCTGTTTTTGTGATTGAATCTGTGGGTTTATGTTTCAGTTTTGTTTTCGTGAATTAGAGGTTTTATAGGTGCTCTTTTTTGTTGTATGGTAAGTCGGAGATAGCTAGAGTAGGTGGGTGATTGAATGTGATGTTGAAGGCACCTGTGTCTCAATGAGCCATTTGATATCCTAATGACCAACGAGGTGAACAATCTTTTAAATAGAGGAAGTTCAAAAGAAAGAGATGGACGACATATCTCAATTTCAATTTGTTAGACTAGGCAGCACATGTTTGTCATGGGATTGCAGATGTCGTACTGTGTGTCTTATATATTTGAGTTTGACTTTCTTTTTATTTAAAAGGTATAGTGTATTTCATTAGTAGCAATCAAGGAAGCAATCTATGTGAAGATAGTGCTTATGTAATGTGTGTTTAATGTGTTGCTTGTTAAAACTTCTGAATGCCACACTATCAGTAAGTATTTAACTTTCTCCTCCTTAGGCTAGAAGCAACTTCTAAGCTATGTTTTCCTTAGCAACTTTTAATTCTCATGTAACGACTTTTCGAGATTGCTTGTTCTGGTTTTATATGATCTAGTACAATCTATCTTGTGATGGAAGACTATTAAATAGATAATTGCATAATTGGGTTAGGTTAGTCATCAACTTCGAAAGTAAATGACTCCAATCTTATTGTCCGCTCATGCAAAAAGCTAGACTTTCTTGTCACTGTTTTCTTGCCTTTTCGTCATCTGAAGTCTAAACTCCAGGGAACTTTTATATGTTTCCAATTTCCTTATATCATTGTCACTCCGAATCTGCTAGTCTGCTAGTCTTCTAGTCTTCATGTGGATGGCTCTTATAGGCTTACTGCTTTGGTCTTATACGTGGAAAGCCTGACTCAGTAATCCTGTTAGCCATTTCAACTTCAGGTCTTCTTCCCTATATTGTCTCTGTCGTGTGTGTGTACTGTGTGACTTATATACTGCTGGTGCTATCAAGGTTCGAGTTTTACTCCGCGTTAAAGAATAATATATTTAGTTCTGGGCGCCATTTTGATTGTCGTAATCTGAATTAGCCATTTTAAGTAGAGGATCCAAGTTTGACACTATTAATTATGCTTTATTAGGTGCAATATTGTCATCGAAACTAGGACTATTCTGTTTTGTGGTTCAGGGGGAAGGAATATACCGTCGAATTTTAGGCCTTCTCTGATCGTTGTAAACCAATAATTTTTCTCTTTCCTTCAGATTTTCCTTGGATGAATAATTTCCTTTTTTTTTTCTCAAGCAACTTTCTCGTTAATTAGCTGACTATCCTGCCTTAGAGAATTATCTTCATGAACTGAGATTCCTTCCCCGTGTTACTTCTTCCTTCAAAATATTCAATTATCAATGGATATCTTAATTCACTGCGAAGAGGTTGGAAATGACCTTACAGCTTCCTCTTCTGCAACACATCAACCTTCTCCGTAGCTGTTATTTTTTGGATTCTTTGCTTTACCCTCATAAAGGTATTCGCAGCTGCATAGTTTATAGAGGAAGAACGAAACTGGTAAGGCCTCGACTGAGAGTAGCAGATGCAGTTACTGGTTTTAAGTTGTCACCATTTGTTTGAGTGACCTTGTGAAATGTGAACTATTGATTGATGCTATAAACTAATATCAATGATCCAAGTGAATGTAACTAATATCCTGAATGAGCAGTGTATTCCGAACATACAGCTTATTTAAATGAGCAAGCATGCAATAGGTTGCCGTAAATGCAATGCCAGCAGATCTGTCTACATGATCTTTTTTCTATTTGTACTTTAATTAATTATTTCTTCCCTTATTATACTGTCCTTATGGGTTATCGGTGCTGTACTTCCATTGCTTTTTCTTTCAGAATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAGGTATCCATGCTATCAGAATTGTATGATTGCAGTTAGTTTTCCTTCTGTGAACTAGGAATGTGTTGCTTGTTCTACACTTTGGTACTTATTCTTATGGGAATTTTGTTGCTTGTGCTACACTCTGGTACTTATTCTTCTGGTATCTTTTAGGAAAAAAGGGAAATAAAGTACAGATGTGAAACACACTATCAAGGATATGGAAACAAATTAATTATACATGTCCACCTATAGGTATTATAGAAAACTCCAGATCCTCCTTCAAATAGCTTACTTTACTTTTTGAGAACTTCAATAGCTTACTCTTTATTCCAGGAAAAAAAACTTCATTTCTCCCCTTCAGTCAAAAGCTCCAAATATTTTTGCCATTACAGATCCCACTTTTCATATATAAAGTATTGGCAATTTTATAAATAAAATGACTCAGAAAATCTACTCACGTGGAGCTAAACAGATACCATACTATATGTGGACAGCTTGACCTTGCATTTTCTGAGTCTTTTTCACTATCAAATGCCTGTTATGGCCTTGTTTGGCTGCAAAGTTTATTGTAGTTATAATGTTATATTTTTCAACAGCCTATAAGCATACTGATTTGAGTGCTCAGGTATTTGTGCTTCTCCTGGCATATATTGACGTTATTCCACATTTGCTATATAGGATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAGGTCCTACATTGTTTAAAGCAATTTGGTTTGTCTTGTAAAATTATTTTGCCTCTTAGATATGAGAAATGGCTTAAATTGTAGGAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTA</genome_strand>
        <mrna_strand>ACAAAACCCTACTTTTTCATATACCCTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTATTTCCTGTGGGATCTTGCTGTCATTGTACCGTTACCGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACTTTCATGAACTGCAGCCTCTCCATCTACTACTTCAGTGACGATAGAAATGAAGCCAAGAACCAACGGGGGGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGCTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCGAACAAGACGACCAGCAGTTTGAAAG.................................................................................GAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E331317" ref_strand="+" ref_description="SGN-E331317 [cTOD-6-N20]">
      <seq>tacaccagaaacatcttttatcagttcttggtcgatagatgcatcttcttgattaatcagaatacattatttcctgtgggatcttgctgtcattgttctgttactgtaatcagactcatgaaggtgtggcatcagcacttgacgtgaaggattactttcatgatctgcagcctctccatctactacttcagtgactatagaaatgaagccaagaaccaacggggtgtcaaggtcccagaagtccaatggtgttcagagtgagggtcctaactgggtcataattgcaggtagtgcgttattaagtacattatctgtacgcttagggtacaagctgaagcaggtgcttgattcaagacagccaaacaagacgaccagcagtttgaaaggaaatgaaaagtcttctgatggaagtaagttagggaatggtcatatgcagtcaagcacttactatttttcccaagatgatgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="101167" stop="105416"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101467" g_stop="101526" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="60" r_length="60" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101527" i_stop="103968" i_length="2442">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103969" g_stop="104057" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="61" r_stop="149" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104058" i_stop="104714" i_length="657">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.550" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104715" g_stop="104951" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="386" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104952" i_stop="105032" i_length="81">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105033" g_stop="105116" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="387" r_stop="470" r_length="84" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E331317" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>470</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331317" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101467" e_stop="101526"/>
          <exon e_start="103969" e_stop="104057"/>
          <exon e_start="104715" e_stop="104951"/>
          <exon e_start="105033" e_stop="105116"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACACCAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAGGTACTTTTTTGATGTACCCTTTTCGTTTTCTTGAATTTTAATGATGGGAATTTCATCTTGTGTTGGTTATGGTATCTGAGCTGTGTAGAAATTTGTTTGGGTGTTTGAATTTCATGTTTGCATTAGCTATGGTCTCTGAATTGTGCAGAAATTAGTTCTGCGTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGTATAGTCCAAGGATTGGGGAGGTTTTTTTCTTTTTGATATATATATAGCCTTTTGTGTCTTTGAATTTCATTTTGCATTGGCTATGGTCTCAGAAGTCCAAGGATTGGGGAGCTTAGCTTTGTTTTTTATAAATAAATTTTCGGGTCTTTGAATTTCATTTTGCATTGGGTATAGTCTCTGAACTGTGCAGAAATTAGTTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGATTAGAACAAGGATTGAGGAGCTTTTTTTTTTTATATATATATATAACCTTTTCGGGAATTTTTTGTGTGGGTAGTTTCATGTAACATTTGTTATGACCTGGTTAAGTATATGAAAATAAATGGTGTTTTTGTGTGTACTTGTGTTCTGTTTTTGTGATTGAATCTGTGGGTTTATGTTTCAGTTTTGTTTTCGTGAATTAGAGGTTTTATAGGTGCTCTTTTTTGTTGTATGGTAAGTCGGAGATAGCTAGAGTAGGTGGGTGATTGAATGTGATGTTGAAGGCACCTGTGTCTCAATGAGCCATTTGATATCCTAATGACCAACGAGGTGAACAATCTTTTAAATAGAGGAAGTTCAAAAGAAAGAGATGGACGACATATCTCAATTTCAATTTGTTAGACTAGGCAGCACATGTTTGTCATGGGATTGCAGATGTCGTACTGTGTGTCTTATATATTTGAGTTTGACTTTCTTTTTATTTAAAAGGTATAGTGTATTTCATTAGTAGCAATCAAGGAAGCAATCTATGTGAAGATAGTGCTTATGTAATGTGTGTTTAATGTGTTGCTTGTTAAAACTTCTGAATGCCACACTATCAGTAAGTATTTAACTTTCTCCTCCTTAGGCTAGAAGCAACTTCTAAGCTATGTTTTCCTTAGCAACTTTTAATTCTCATGTAACGACTTTTCGAGATTGCTTGTTCTGGTTTTATATGATCTAGTACAATCTATCTTGTGATGGAAGACTATTAAATAGATAATTGCATAATTGGGTTAGGTTAGTCATCAACTTCGAAAGTAAATGACTCCAATCTTATTGTCCGCTCATGCAAAAAGCTAGACTTTCTTGTCACTGTTTTCTTGCCTTTTCGTCATCTGAAGTCTAAACTCCAGGGAACTTTTATATGTTTCCAATTTCCTTATATCATTGTCACTCCGAATCTGCTAGTCTGCTAGTCTTCTAGTCTTCATGTGGATGGCTCTTATAGGCTTACTGCTTTGGTCTTATACGTGGAAAGCCTGACTCAGTAATCCTGTTAGCCATTTCAACTTCAGGTCTTCTTCCCTATATTGTCTCTGTCGTGTGTGTGTACTGTGTGACTTATATACTGCTGGTGCTATCAAGGTTCGAGTTTTACTCCGCGTTAAAGAATAATATATTTAGTTCTGGGCGCCATTTTGATTGTCGTAATCTGAATTAGCCATTTTAAGTAGAGGATCCAAGTTTGACACTATTAATTATGCTTTATTAGGTGCAATATTGTCATCGAAACTAGGACTATTCTGTTTTGTGGTTCAGGGGGAAGGAATATACCGTCGAATTTTAGGCCTTCTCTGATCGTTGTAAACCAATAATTTTTCTCTTTCCTTCAGATTTTCCTTGGATGAATAATTTCCTTTTTTTTTTCTCAAGCAACTTTCTCGTTAATTAGCTGACTATCCTGCCTTAGAGAATTATCTTCATGAACTGAGATTCCTTCCCCGTGTTACTTCTTCCTTCAAAATATTCAATTATCAATGGATATCTTAATTCACTGCGAAGAGGTTGGAAATGACCTTACAGCTTCCTCTTCTGCAACACATCAACCTTCTCCGTAGCTGTTATTTTTTGGATTCTTTGCTTTACCCTCATAAAGGTATTCGCAGCTGCATAGTTTATAGAGGAAGAACGAAACTGGTAAGGCCTCGACTGAGAGTAGCAGATGCAGTTACTGGTTTTAAGTTGTCACCATTTGTTTGAGTGACCTTGTGAAATGTGAACTATTGATTGATGCTATAAACTAATATCAATGATCCAAGTGAATGTAACTAATATCCTGAATGAGCAGTGTATTCCGAACATACAGCTTATTTAAATGAGCAAGCATGCAATAGGTTGCCGTAAATGCAATGCCAGCAGATCTGTCTACATGATCTTTTTTCTATTTGTACTTTAATTAATTATTTCTTCCCTTATTATACTGTCCTTATGGGTTATCGGTGCTGTACTTCCATTGCTTTTTCTTTCAGAATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAGGTATCCATGCTATCAGAATTGTATGATTGCAGTTAGTTTTCCTTCTGTGAACTAGGAATGTGTTGCTTGTTCTACACTTTGGTACTTATTCTTATGGGAATTTTGTTGCTTGTGCTACACTCTGGTACTTATTCTTCTGGTATCTTTTAGGAAAAAAGGGAAATAAAGTACAGATGTGAAACACACTATCAAGGATATGGAAACAAATTAATTATACATGTCCACCTATAGGTATTATAGAAAACTCCAGATCCTCCTTCAAATAGCTTACTTTACTTTTTGAGAACTTCAATAGCTTACTCTTTATTCCAGGAAAAAAAACTTCATTTCTCCCCTTCAGTCAAAAGCTCCAAATATTTTTGCCATTACAGATCCCACTTTTCATATATAAAGTATTGGCAATTTTATAAATAAAATGACTCAGAAAATCTACTCACGTGGAGCTAAACAGATACCATACTATATGTGGACAGCTTGACCTTGCATTTTCTGAGTCTTTTTCACTATCAAATGCCTGTTATGGCCTTGTTTGGCTGCAAAGTTTATTGTAGTTATAATGTTATATTTTTCAACAGCCTATAAGCATACTGATTTGAGTGCTCAGGTATTTGTGCTTCTCCTGGCATATATTGACGTTATTCCACATTTGCTATATAGGATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAGGTCCTACATTGTTTAAAGCAATTTGGTTTGTCTTGTAAAATTATTTTGCCTCTTAGATATGAGAAATGGCTTAAATTGTAGGAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGATG</genome_strand>
        <mrna_strand>TACACCAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAG.................................................................................GAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E544618" ref_strand="+" ref_description="SGN-E544618 [TUS-67-A17]">
      <seq>cagaaacatcttttatcagttcttggtcgatagatgcatcttcttgattaatcagaatacattatttcctgtgggatcttgctgtcattgttctgttactgtaatcagactcatgaaggtgtggcatcagcacttgacgtgaaggattactttcatgatctgcagcctctccatctactacttcagtgactatagaaatgaagccaagaaccaacggggtgtcaaggtcccagaagtccaatggtgttcagagtgagggtcctaactgggtcataattgcaggtagtgcgttattaagtacattatctgtacgcttagggtacaagctgaagcaggtgcttgattcaagacagccaaacaagacgaccagcagtttgaaaggaaatgaaaagtcttctgatggaagtaagttagggaatggtcatatgcagtcaagcacttactatttttcccaagatgatgatggctgctacaattgcaacacagaagctggaggattaggaattacaaagcagcagtataatgggtctgagcctgaaatggtgctccctctggtggcagttcctgccatcggattcaataaagagaatggtggggtttggtcaacctctcctgaccgtcttgaactaccacagataccatttcatcgctctaacagctctgagtcaccatgtgtctctgaatccggttctgacatatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="101172" stop="106633"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101472" g_stop="101526" g_length="55"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="55" r_length="55" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101527" i_stop="103968" i_length="2442">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103969" g_stop="104057" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="56" r_stop="144" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104058" i_stop="104714" i_length="657">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.550" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104715" g_stop="104951" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="381" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104952" i_stop="105032" i_length="81">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105033" g_stop="105137" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="486" r_length="105" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="105138" i_stop="106118" i_length="981">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106119" g_stop="106333" g_length="215"/>
          <reference_exon_boundary r_type="cDNA" r_start="487" r_stop="701" r_length="215" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E544618" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>701</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544618" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101472" e_stop="101526"/>
          <exon e_start="103969" e_stop="104057"/>
          <exon e_start="104715" e_stop="104951"/>
          <exon e_start="105033" e_stop="105137"/>
          <exon e_start="106119" e_stop="106333"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAGGTACTTTTTTGATGTACCCTTTTCGTTTTCTTGAATTTTAATGATGGGAATTTCATCTTGTGTTGGTTATGGTATCTGAGCTGTGTAGAAATTTGTTTGGGTGTTTGAATTTCATGTTTGCATTAGCTATGGTCTCTGAATTGTGCAGAAATTAGTTCTGCGTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGTATAGTCCAAGGATTGGGGAGGTTTTTTTCTTTTTGATATATATATAGCCTTTTGTGTCTTTGAATTTCATTTTGCATTGGCTATGGTCTCAGAAGTCCAAGGATTGGGGAGCTTAGCTTTGTTTTTTATAAATAAATTTTCGGGTCTTTGAATTTCATTTTGCATTGGGTATAGTCTCTGAACTGTGCAGAAATTAGTTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGATTAGAACAAGGATTGAGGAGCTTTTTTTTTTTATATATATATATAACCTTTTCGGGAATTTTTTGTGTGGGTAGTTTCATGTAACATTTGTTATGACCTGGTTAAGTATATGAAAATAAATGGTGTTTTTGTGTGTACTTGTGTTCTGTTTTTGTGATTGAATCTGTGGGTTTATGTTTCAGTTTTGTTTTCGTGAATTAGAGGTTTTATAGGTGCTCTTTTTTGTTGTATGGTAAGTCGGAGATAGCTAGAGTAGGTGGGTGATTGAATGTGATGTTGAAGGCACCTGTGTCTCAATGAGCCATTTGATATCCTAATGACCAACGAGGTGAACAATCTTTTAAATAGAGGAAGTTCAAAAGAAAGAGATGGACGACATATCTCAATTTCAATTTGTTAGACTAGGCAGCACATGTTTGTCATGGGATTGCAGATGTCGTACTGTGTGTCTTATATATTTGAGTTTGACTTTCTTTTTATTTAAAAGGTATAGTGTATTTCATTAGTAGCAATCAAGGAAGCAATCTATGTGAAGATAGTGCTTATGTAATGTGTGTTTAATGTGTTGCTTGTTAAAACTTCTGAATGCCACACTATCAGTAAGTATTTAACTTTCTCCTCCTTAGGCTAGAAGCAACTTCTAAGCTATGTTTTCCTTAGCAACTTTTAATTCTCATGTAACGACTTTTCGAGATTGCTTGTTCTGGTTTTATATGATCTAGTACAATCTATCTTGTGATGGAAGACTATTAAATAGATAATTGCATAATTGGGTTAGGTTAGTCATCAACTTCGAAAGTAAATGACTCCAATCTTATTGTCCGCTCATGCAAAAAGCTAGACTTTCTTGTCACTGTTTTCTTGCCTTTTCGTCATCTGAAGTCTAAACTCCAGGGAACTTTTATATGTTTCCAATTTCCTTATATCATTGTCACTCCGAATCTGCTAGTCTGCTAGTCTTCTAGTCTTCATGTGGATGGCTCTTATAGGCTTACTGCTTTGGTCTTATACGTGGAAAGCCTGACTCAGTAATCCTGTTAGCCATTTCAACTTCAGGTCTTCTTCCCTATATTGTCTCTGTCGTGTGTGTGTACTGTGTGACTTATATACTGCTGGTGCTATCAAGGTTCGAGTTTTACTCCGCGTTAAAGAATAATATATTTAGTTCTGGGCGCCATTTTGATTGTCGTAATCTGAATTAGCCATTTTAAGTAGAGGATCCAAGTTTGACACTATTAATTATGCTTTATTAGGTGCAATATTGTCATCGAAACTAGGACTATTCTGTTTTGTGGTTCAGGGGGAAGGAATATACCGTCGAATTTTAGGCCTTCTCTGATCGTTGTAAACCAATAATTTTTCTCTTTCCTTCAGATTTTCCTTGGATGAATAATTTCCTTTTTTTTTTCTCAAGCAACTTTCTCGTTAATTAGCTGACTATCCTGCCTTAGAGAATTATCTTCATGAACTGAGATTCCTTCCCCGTGTTACTTCTTCCTTCAAAATATTCAATTATCAATGGATATCTTAATTCACTGCGAAGAGGTTGGAAATGACCTTACAGCTTCCTCTTCTGCAACACATCAACCTTCTCCGTAGCTGTTATTTTTTGGATTCTTTGCTTTACCCTCATAAAGGTATTCGCAGCTGCATAGTTTATAGAGGAAGAACGAAACTGGTAAGGCCTCGACTGAGAGTAGCAGATGCAGTTACTGGTTTTAAGTTGTCACCATTTGTTTGAGTGACCTTGTGAAATGTGAACTATTGATTGATGCTATAAACTAATATCAATGATCCAAGTGAATGTAACTAATATCCTGAATGAGCAGTGTATTCCGAACATACAGCTTATTTAAATGAGCAAGCATGCAATAGGTTGCCGTAAATGCAATGCCAGCAGATCTGTCTACATGATCTTTTTTCTATTTGTACTTTAATTAATTATTTCTTCCCTTATTATACTGTCCTTATGGGTTATCGGTGCTGTACTTCCATTGCTTTTTCTTTCAGAATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAGGTATCCATGCTATCAGAATTGTATGATTGCAGTTAGTTTTCCTTCTGTGAACTAGGAATGTGTTGCTTGTTCTACACTTTGGTACTTATTCTTATGGGAATTTTGTTGCTTGTGCTACACTCTGGTACTTATTCTTCTGGTATCTTTTAGGAAAAAAGGGAAATAAAGTACAGATGTGAAACACACTATCAAGGATATGGAAACAAATTAATTATACATGTCCACCTATAGGTATTATAGAAAACTCCAGATCCTCCTTCAAATAGCTTACTTTACTTTTTGAGAACTTCAATAGCTTACTCTTTATTCCAGGAAAAAAAACTTCATTTCTCCCCTTCAGTCAAAAGCTCCAAATATTTTTGCCATTACAGATCCCACTTTTCATATATAAAGTATTGGCAATTTTATAAATAAAATGACTCAGAAAATCTACTCACGTGGAGCTAAACAGATACCATACTATATGTGGACAGCTTGACCTTGCATTTTCTGAGTCTTTTTCACTATCAAATGCCTGTTATGGCCTTGTTTGGCTGCAAAGTTTATTGTAGTTATAATGTTATATTTTTCAACAGCCTATAAGCATACTGATTTGAGTGCTCAGGTATTTGTGCTTCTCCTGGCATATATTGACGTTATTCCACATTTGCTATATAGGATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAGGTCCTACATTGTTTAAAGCAATTTGGTTTGTCTTGTAAAATTATTTTGCCTCTTAGATATGAGAAATGGCTTAAATTGTAGGAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGATGGCTGCTACAATTGCAACACGGGTATGCAAATTCTTGCCATCCCTTTGATGTTTTATCTTAGAATTTAGGTTGTTCTTTTTGGTGTAAAGAACGTGGCTAGTGATTTGATGTTGTCATCATCTTTTTCCTGTACTCCTGTTGATTGTAACTCCCAAATTTGCGAGAGAATGATTTGAACAAGTAAAGTTAATCACAGAGGCATCATCAACAATGTTTACATGTTAGTGTTGATTATTTGGTTGCTTTCTAACATGAAAATGAGACACGACACTCTTCAGAATTTAGACCTGTTTACAGTTATCTTACTCGCTTTAAGAAGTTTATGGTAATGTCAAGTGAAAGATTGAAACTGAGCTTATGTGATCAATATGATGATTTTCTTGGTATACACTATGCTGATTTTTCTTCAAAAACAGAAGGTTAATAAATTACCACTGCAGTTAGTCCAACAGCTAACCTTAAGGAAATAAAGAGTCATGGGAAAAGTCGAGTTCTATTTATGTCTAACCTTTTTGTTCCCATTTTGCTCATGCTTATTATTTGATCTTATGGTCCAGTTTGTTTGCTGAAATGTATACTACAACATCTTATGGGGTGTCACTGTTTCCTGCCATATTATGGGGCATGATTTGGGGTATCTCTGTTGGTGGCTCATGCAACTTACGTGTAGCCTAGTTCAACGTACAATTTTCTGGGAACTGCTAAGGTTTCTTTTTTCTCCCATTAGAACTCTTAAAGAGCCCTCAGGCCTTCAGTCTAGTGGACGCAACACAAGTTGTGTGAATAGGTCCTCTAGTTTTTTAGGTATCATTTGGTGGATTAGCTGACAATTCAGTATTTCTTGTGTTTTTTGAGTTTTGTTTTCATCTTATTATTTTTCTCAAGATTAGTGTGCTTGAAATGGTGTGATTAAATGTGCTTCCATCTCTTGTACATCTTACAATAGTCTATTAACTATTGTTGGCTACTTTTAGTGAACATTTGCTATTTTTATACTGACAGAAGCTGGAGGATTAGGAATTACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGTGCTCCCTCTGGTGGCAGTTCCTGCCATCGGATTCAATAAAGAGAATGGTGGGGTTTGGTCAACCTCTCCTGACCGTCTTGAACTACCACAGAAACCATTTCATCGCTCTAACAGCTCTGAGTCACCATGTGTCTCTGAATCCGGTTCTGACATATAC</genome_strand>
        <mrna_strand>CAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAG.................................................................................GAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGATGGCTGCTACAATTGCAACACAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGGAGGATTAGGAATTACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGTGCTCCCTCTGGTGGCAGTTCCTGCCATCGGATTCAATAAAGAGAATGGTGGGGTTTGGTCAACCTCTCCTGACCGTCTTGAACTACCACAGATACCATTTCATCGCTCTAACAGCTCTGAGTCACCATGTGTCTCTGAATCCGGTTCTGACATATAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E306007" ref_strand="+" ref_description="SGN-E306007 [cLEY-17-B16]">
      <seq>aaacatcttttatcagttcttggtcgatagatgcatctttttgattaatcagaatacattatttcctgtgggatcttgctgtcattgttctgttactgtaatcagactcatgaaggtgtggcatcagcacttgacgtgaaggattactttcatgatctgcagcctctccatctactacttcagtgactatagaaatgaagccaagaaccaacggggtgtcaaggtcccagaagtccaatggtgttcacagtgagggtcctaacttggtcataattgcaggtagcgcgatattaagtacattatctgtgcgcttatggtacaagctgaaacaggtgcttgattcaagacagccaatcgagacgaccagcagttcgaaaggaaatgaaaagtcttctgatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="101175" stop="105355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101475" g_stop="101526" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="52" r_length="52" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101527" i_stop="103968" i_length="2442">
            <donor d_prob="0.988" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103969" g_stop="104057" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="53" r_stop="141" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104058" i_stop="104714" i_length="657">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.550" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104715" g_stop="104951" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="142" r_stop="378" r_length="237" r_score="0.958"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104952" i_stop="105032" i_length="81">
            <donor d_prob="0.955" d_score="0.92"/>
            <acceptor a_prob="0.980" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105033" g_stop="105055" g_length="23"/>
          <reference_exon_boundary r_type="cDNA" r_start="379" r_stop="401" r_length="23" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E306007" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E306007" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101475" e_stop="101526"/>
          <exon e_start="103969" e_stop="104057"/>
          <exon e_start="104715" e_stop="104951"/>
          <exon e_start="105033" e_stop="105055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAGGTACTTTTTTGATGTACCCTTTTCGTTTTCTTGAATTTTAATGATGGGAATTTCATCTTGTGTTGGTTATGGTATCTGAGCTGTGTAGAAATTTGTTTGGGTGTTTGAATTTCATGTTTGCATTAGCTATGGTCTCTGAATTGTGCAGAAATTAGTTCTGCGTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGTATAGTCCAAGGATTGGGGAGGTTTTTTTCTTTTTGATATATATATAGCCTTTTGTGTCTTTGAATTTCATTTTGCATTGGCTATGGTCTCAGAAGTCCAAGGATTGGGGAGCTTAGCTTTGTTTTTTATAAATAAATTTTCGGGTCTTTGAATTTCATTTTGCATTGGGTATAGTCTCTGAACTGTGCAGAAATTAGTTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGATTAGAACAAGGATTGAGGAGCTTTTTTTTTTTATATATATATATAACCTTTTCGGGAATTTTTTGTGTGGGTAGTTTCATGTAACATTTGTTATGACCTGGTTAAGTATATGAAAATAAATGGTGTTTTTGTGTGTACTTGTGTTCTGTTTTTGTGATTGAATCTGTGGGTTTATGTTTCAGTTTTGTTTTCGTGAATTAGAGGTTTTATAGGTGCTCTTTTTTGTTGTATGGTAAGTCGGAGATAGCTAGAGTAGGTGGGTGATTGAATGTGATGTTGAAGGCACCTGTGTCTCAATGAGCCATTTGATATCCTAATGACCAACGAGGTGAACAATCTTTTAAATAGAGGAAGTTCAAAAGAAAGAGATGGACGACATATCTCAATTTCAATTTGTTAGACTAGGCAGCACATGTTTGTCATGGGATTGCAGATGTCGTACTGTGTGTCTTATATATTTGAGTTTGACTTTCTTTTTATTTAAAAGGTATAGTGTATTTCATTAGTAGCAATCAAGGAAGCAATCTATGTGAAGATAGTGCTTATGTAATGTGTGTTTAATGTGTTGCTTGTTAAAACTTCTGAATGCCACACTATCAGTAAGTATTTAACTTTCTCCTCCTTAGGCTAGAAGCAACTTCTAAGCTATGTTTTCCTTAGCAACTTTTAATTCTCATGTAACGACTTTTCGAGATTGCTTGTTCTGGTTTTATATGATCTAGTACAATCTATCTTGTGATGGAAGACTATTAAATAGATAATTGCATAATTGGGTTAGGTTAGTCATCAACTTCGAAAGTAAATGACTCCAATCTTATTGTCCGCTCATGCAAAAAGCTAGACTTTCTTGTCACTGTTTTCTTGCCTTTTCGTCATCTGAAGTCTAAACTCCAGGGAACTTTTATATGTTTCCAATTTCCTTATATCATTGTCACTCCGAATCTGCTAGTCTGCTAGTCTTCTAGTCTTCATGTGGATGGCTCTTATAGGCTTACTGCTTTGGTCTTATACGTGGAAAGCCTGACTCAGTAATCCTGTTAGCCATTTCAACTTCAGGTCTTCTTCCCTATATTGTCTCTGTCGTGTGTGTGTACTGTGTGACTTATATACTGCTGGTGCTATCAAGGTTCGAGTTTTACTCCGCGTTAAAGAATAATATATTTAGTTCTGGGCGCCATTTTGATTGTCGTAATCTGAATTAGCCATTTTAAGTAGAGGATCCAAGTTTGACACTATTAATTATGCTTTATTAGGTGCAATATTGTCATCGAAACTAGGACTATTCTGTTTTGTGGTTCAGGGGGAAGGAATATACCGTCGAATTTTAGGCCTTCTCTGATCGTTGTAAACCAATAATTTTTCTCTTTCCTTCAGATTTTCCTTGGATGAATAATTTCCTTTTTTTTTTCTCAAGCAACTTTCTCGTTAATTAGCTGACTATCCTGCCTTAGAGAATTATCTTCATGAACTGAGATTCCTTCCCCGTGTTACTTCTTCCTTCAAAATATTCAATTATCAATGGATATCTTAATTCACTGCGAAGAGGTTGGAAATGACCTTACAGCTTCCTCTTCTGCAACACATCAACCTTCTCCGTAGCTGTTATTTTTTGGATTCTTTGCTTTACCCTCATAAAGGTATTCGCAGCTGCATAGTTTATAGAGGAAGAACGAAACTGGTAAGGCCTCGACTGAGAGTAGCAGATGCAGTTACTGGTTTTAAGTTGTCACCATTTGTTTGAGTGACCTTGTGAAATGTGAACTATTGATTGATGCTATAAACTAATATCAATGATCCAAGTGAATGTAACTAATATCCTGAATGAGCAGTGTATTCCGAACATACAGCTTATTTAAATGAGCAAGCATGCAATAGGTTGCCGTAAATGCAATGCCAGCAGATCTGTCTACATGATCTTTTTTCTATTTGTACTTTAATTAATTATTTCTTCCCTTATTATACTGTCCTTATGGGTTATCGGTGCTGTACTTCCATTGCTTTTTCTTTCAGAATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAGGTATCCATGCTATCAGAATTGTATGATTGCAGTTAGTTTTCCTTCTGTGAACTAGGAATGTGTTGCTTGTTCTACACTTTGGTACTTATTCTTATGGGAATTTTGTTGCTTGTGCTACACTCTGGTACTTATTCTTCTGGTATCTTTTAGGAAAAAAGGGAAATAAAGTACAGATGTGAAACACACTATCAAGGATATGGAAACAAATTAATTATACATGTCCACCTATAGGTATTATAGAAAACTCCAGATCCTCCTTCAAATAGCTTACTTTACTTTTTGAGAACTTCAATAGCTTACTCTTTATTCCAGGAAAAAAAACTTCATTTCTCCCCTTCAGTCAAAAGCTCCAAATATTTTTGCCATTACAGATCCCACTTTTCATATATAAAGTATTGGCAATTTTATAAATAAAATGACTCAGAAAATCTACTCACGTGGAGCTAAACAGATACCATACTATATGTGGACAGCTTGACCTTGCATTTTCTGAGTCTTTTTCACTATCAAATGCCTGTTATGGCCTTGTTTGGCTGCAAAGTTTATTGTAGTTATAATGTTATATTTTTCAACAGCCTATAAGCATACTGATTTGAGTGCTCAGGTATTTGTGCTTCTCCTGGCATATATTGACGTTATTCCACATTTGCTATATAGGATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAGGTCCTACATTGTTTAAAGCAATTTGGTTTGTCTTGTAAAATTATTTTGCCTCTTAGATATGAGAAATGGCTTAAATTGTAGGAAATGAAAAGTCTTCTGATGGA</genome_strand>
        <mrna_strand>AAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTTTTGATTAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCACAGTGAGGGTCCTAACTTGGTCATAATTGCAGGTAGCGCGATATTAAGTACATTATCTGTGCGCTTATGGTACAAGCTGAAACAGGTGCTTGATTCAAGACAGCCAATCGAGACGACCAGCAGTTCGAAAG.................................................................................GAAATGAAAAGTCTTCTGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E256443" ref_strand="+" ref_description="SGN-E256443 [cLEG-38-M8]">
      <seq>ttttatcagttcttggtcgatagatgcatcttcttgattaatcagaatacattatttcctgtgggatcttgctgtcattgttctgttactgtaatcagactcatgaaggtgtggcatcagcacttgacgtgaaggattactttcatgatctgcagcctctccatctactacttcagtgactatagaaatgaagccaagaaccaacggggtgtcaaggtcccagaagtccaatggtgttcagagtgagggtcctaactgggtcataattgcaggtagtgcgttattaagtacattatctgtacgcttagggtacaagctgaagcaggtgcttgattcaagacagccaaacaagacgaccagcagtttgaaaggaaatgaaaagtcttctgatggaagtaagttagggaatggtcatatgcagtcaagcacttactatttttcccaagatgatgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="101182" stop="105415"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="101482" g_stop="101526" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="45" r_length="45" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="101527" i_stop="103968" i_length="2442">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103969" g_stop="104057" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="46" r_stop="134" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="104058" i_stop="104714" i_length="657">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.550" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="104715" g_stop="104951" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="135" r_stop="371" r_length="237" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="104952" i_stop="105032" i_length="81">
            <donor d_prob="0.955" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="105033" g_stop="105115" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="372" r_stop="454" r_length="83" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E256443" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>454</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E256443" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="101482" e_stop="101526"/>
          <exon e_start="103969" e_stop="104057"/>
          <exon e_start="104715" e_stop="104951"/>
          <exon e_start="105033" e_stop="105115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAGGTACTTTTTTGATGTACCCTTTTCGTTTTCTTGAATTTTAATGATGGGAATTTCATCTTGTGTTGGTTATGGTATCTGAGCTGTGTAGAAATTTGTTTGGGTGTTTGAATTTCATGTTTGCATTAGCTATGGTCTCTGAATTGTGCAGAAATTAGTTCTGCGTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGTATAGTCCAAGGATTGGGGAGGTTTTTTTCTTTTTGATATATATATAGCCTTTTGTGTCTTTGAATTTCATTTTGCATTGGCTATGGTCTCAGAAGTCCAAGGATTGGGGAGCTTAGCTTTGTTTTTTATAAATAAATTTTCGGGTCTTTGAATTTCATTTTGCATTGGGTATAGTCTCTGAACTGTGCAGAAATTAGTTGTGTGTGTGTGTTTGGTGGCATTTGGTTGTCAAGATTAGAACAAGGATTGAGGAGCTTTTTTTTTTTATATATATATATAACCTTTTCGGGAATTTTTTGTGTGGGTAGTTTCATGTAACATTTGTTATGACCTGGTTAAGTATATGAAAATAAATGGTGTTTTTGTGTGTACTTGTGTTCTGTTTTTGTGATTGAATCTGTGGGTTTATGTTTCAGTTTTGTTTTCGTGAATTAGAGGTTTTATAGGTGCTCTTTTTTGTTGTATGGTAAGTCGGAGATAGCTAGAGTAGGTGGGTGATTGAATGTGATGTTGAAGGCACCTGTGTCTCAATGAGCCATTTGATATCCTAATGACCAACGAGGTGAACAATCTTTTAAATAGAGGAAGTTCAAAAGAAAGAGATGGACGACATATCTCAATTTCAATTTGTTAGACTAGGCAGCACATGTTTGTCATGGGATTGCAGATGTCGTACTGTGTGTCTTATATATTTGAGTTTGACTTTCTTTTTATTTAAAAGGTATAGTGTATTTCATTAGTAGCAATCAAGGAAGCAATCTATGTGAAGATAGTGCTTATGTAATGTGTGTTTAATGTGTTGCTTGTTAAAACTTCTGAATGCCACACTATCAGTAAGTATTTAACTTTCTCCTCCTTAGGCTAGAAGCAACTTCTAAGCTATGTTTTCCTTAGCAACTTTTAATTCTCATGTAACGACTTTTCGAGATTGCTTGTTCTGGTTTTATATGATCTAGTACAATCTATCTTGTGATGGAAGACTATTAAATAGATAATTGCATAATTGGGTTAGGTTAGTCATCAACTTCGAAAGTAAATGACTCCAATCTTATTGTCCGCTCATGCAAAAAGCTAGACTTTCTTGTCACTGTTTTCTTGCCTTTTCGTCATCTGAAGTCTAAACTCCAGGGAACTTTTATATGTTTCCAATTTCCTTATATCATTGTCACTCCGAATCTGCTAGTCTGCTAGTCTTCTAGTCTTCATGTGGATGGCTCTTATAGGCTTACTGCTTTGGTCTTATACGTGGAAAGCCTGACTCAGTAATCCTGTTAGCCATTTCAACTTCAGGTCTTCTTCCCTATATTGTCTCTGTCGTGTGTGTGTACTGTGTGACTTATATACTGCTGGTGCTATCAAGGTTCGAGTTTTACTCCGCGTTAAAGAATAATATATTTAGTTCTGGGCGCCATTTTGATTGTCGTAATCTGAATTAGCCATTTTAAGTAGAGGATCCAAGTTTGACACTATTAATTATGCTTTATTAGGTGCAATATTGTCATCGAAACTAGGACTATTCTGTTTTGTGGTTCAGGGGGAAGGAATATACCGTCGAATTTTAGGCCTTCTCTGATCGTTGTAAACCAATAATTTTTCTCTTTCCTTCAGATTTTCCTTGGATGAATAATTTCCTTTTTTTTTTCTCAAGCAACTTTCTCGTTAATTAGCTGACTATCCTGCCTTAGAGAATTATCTTCATGAACTGAGATTCCTTCCCCGTGTTACTTCTTCCTTCAAAATATTCAATTATCAATGGATATCTTAATTCACTGCGAAGAGGTTGGAAATGACCTTACAGCTTCCTCTTCTGCAACACATCAACCTTCTCCGTAGCTGTTATTTTTTGGATTCTTTGCTTTACCCTCATAAAGGTATTCGCAGCTGCATAGTTTATAGAGGAAGAACGAAACTGGTAAGGCCTCGACTGAGAGTAGCAGATGCAGTTACTGGTTTTAAGTTGTCACCATTTGTTTGAGTGACCTTGTGAAATGTGAACTATTGATTGATGCTATAAACTAATATCAATGATCCAAGTGAATGTAACTAATATCCTGAATGAGCAGTGTATTCCGAACATACAGCTTATTTAAATGAGCAAGCATGCAATAGGTTGCCGTAAATGCAATGCCAGCAGATCTGTCTACATGATCTTTTTTCTATTTGTACTTTAATTAATTATTTCTTCCCTTATTATACTGTCCTTATGGGTTATCGGTGCTGTACTTCCATTGCTTTTTCTTTCAGAATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAGGTATCCATGCTATCAGAATTGTATGATTGCAGTTAGTTTTCCTTCTGTGAACTAGGAATGTGTTGCTTGTTCTACACTTTGGTACTTATTCTTATGGGAATTTTGTTGCTTGTGCTACACTCTGGTACTTATTCTTCTGGTATCTTTTAGGAAAAAAGGGAAATAAAGTACAGATGTGAAACACACTATCAAGGATATGGAAACAAATTAATTATACATGTCCACCTATAGGTATTATAGAAAACTCCAGATCCTCCTTCAAATAGCTTACTTTACTTTTTGAGAACTTCAATAGCTTACTCTTTATTCCAGGAAAAAAAACTTCATTTCTCCCCTTCAGTCAAAAGCTCCAAATATTTTTGCCATTACAGATCCCACTTTTCATATATAAAGTATTGGCAATTTTATAAATAAAATGACTCAGAAAATCTACTCACGTGGAGCTAAACAGATACCATACTATATGTGGACAGCTTGACCTTGCATTTTCTGAGTCTTTTTCACTATCAAATGCCTGTTATGGCCTTGTTTGGCTGCAAAGTTTATTGTAGTTATAATGTTATATTTTTCAACAGCCTATAAGCATACTGATTTGAGTGCTCAGGTATTTGTGCTTCTCCTGGCATATATTGACGTTATTCCACATTTGCTATATAGGATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAGGTCCTACATTGTTTAAAGCAATTTGGTTTGTCTTGTAAAATTATTTTGCCTCTTAGATATGAGAAATGGCTTAAATTGTAGGAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGAT</genome_strand>
        <mrna_strand>TTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAG.................................................................................GAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E564016" ref_strand="+" ref_description="SGN-E564016 [3430]">
      <seq>gcaggtagtgcgttattaagtacattatctgtacgcttaggctacaagctgaagcaggtgcttggattcacagacagccgaacaagacgaccagcagtttgaaaggaaatgaaaagtcttctgatggaagtaagttagggaatggtcatatgcagtcaagcacttactatttttcccaagcatgatgatggctgctacaattgcaacacggaagctggaggattgggaatcacaaagcagcagtataatgggtctgagcctgaaatggcgctccctctcgtggcagttcctgccattggattcaataaagagaatggtgggatttgggtcaacgctctcctggaccgtcttggaactgccacagaaaccatttcatcgctctaacagctctgagtcgccatgtgtctccgaatctggttccgacatatacagcaagcgagaagtgatacaaaagctgaggctacagataaagagaagggacgaaacgatattagagatgcaagaacagattgtagagttgcaagcttctctcaattctcagatgtcgcattccacccatcagcagtcagtgctggatgctgcaaaccagggaatctggtttgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="104549" stop="106804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104849" g_stop="104951" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="105" r_length="105" r_score="0.942"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104952" i_stop="105032" i_length="81">
            <donor d_prob="0.955" d_score="0.90"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105033" g_stop="105137" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="106" r_stop="211" r_length="106" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="105138" i_stop="106118" i_length="981">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106119" g_stop="106504" g_length="386"/>
          <reference_exon_boundary r_type="cDNA" r_start="212" r_stop="604" r_length="393" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E564016" ref_strand="+">
        <total_alignment_score>0.931</total_alignment_score>
        <cumulative_length_of_scored_exons>594</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E564016" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104849" e_stop="104951"/>
          <exon e_start="105033" e_stop="105137"/>
          <exon e_start="106119" e_stop="106504"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTT-GATTCA-AGACAGCCAAACAAGACGACCAGCAGTTTGAAAGGTCCTACATTGTTTAAAGCAATTTGGTTTGTCTTGTAAAATTATTTTGCCTCTTAGATATGAGAAATGGCTTAAATTGTAGGAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAG-ATGATGATGGCTGCTACAATTGCAACACGGGTATGCAAATTCTTGCCATCCCTTTGATGTTTTATCTTAGAATTTAGGTTGTTCTTTTTGGTGTAAAGAACGTGGCTAGTGATTTGATGTTGTCATCATCTTTTTCCTGTACTCCTGTTGATTGTAACTCCCAAATTTGCGAGAGAATGATTTGAACAAGTAAAGTTAATCACAGAGGCATCATCAACAATGTTTACATGTTAGTGTTGATTATTTGGTTGCTTTCTAACATGAAAATGAGACACGACACTCTTCAGAATTTAGACCTGTTTACAGTTATCTTACTCGCTTTAAGAAGTTTATGGTAATGTCAAGTGAAAGATTGAAACTGAGCTTATGTGATCAATATGATGATTTTCTTGGTATACACTATGCTGATTTTTCTTCAAAAACAGAAGGTTAATAAATTACCACTGCAGTTAGTCCAACAGCTAACCTTAAGGAAATAAAGAGTCATGGGAAAAGTCGAGTTCTATTTATGTCTAACCTTTTTGTTCCCATTTTGCTCATGCTTATTATTTGATCTTATGGTCCAGTTTGTTTGCTGAAATGTATACTACAACATCTTATGGGGTGTCACTGTTTCCTGCCATATTATGGGGCATGATTTGGGGTATCTCTGTTGGTGGCTCATGCAACTTACGTGTAGCCTAGTTCAACGTACAATTTTCTGGGAACTGCTAAGGTTTCTTTTTTCTCCCATTAGAACTCTTAAAGAGCCCTCAGGCCTTCAGTCTAGTGGACGCAACACAAGTTGTGTGAATAGGTCCTCTAGTTTTTTAGGTATCATTTGGTGGATTAGCTGACAATTCAGTATTTCTTGTGTTTTTTGAGTTTTGTTTTCATCTTATTATTTTTCTCAAGATTAGTGTGCTTGAAATGGTGTGATTAAATGTGCTTCCATCTCTTGTACATCTTACAATAGTCTATTAACTATTGTTGGCTACTTTTAGTGAACATTTGCTATTTTTATACTGACAGAAGCTGGAGGATTAGGAATTACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGTGCTCCCTCTGGTGGCAGTTCCTGCCATCGGATTCAATAAAGAGAATGGTGGGGTTT-GGTCAAC-CTCTCCT-GACCGTCTT-GAACTACCACAGAAACCATTTCATCGCTCTAACAGCTCTGAGTCACCATGTGTCTCTGAATCCGGTTCTGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGTTAAAGAGAAGGGACGAAACAATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCATCAGCAGTCATTGCTGGATGCTGCCAA-CAGGG-ATCT-GTTTGAT</genome_strand>
        <mrna_strand>GCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGCTACAAGCTGAAGCAGGTGCTTGGATTCACAGACAGCCGAACAAGACGACCAGCAGTTTGAAAG.................................................................................GAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGCATGATGATGGCTGCTACAATTGCAACACGG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTGGAGGATTGGGAATCACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGCGCTCCCTCTCGTGGCAGTTCCTGCCATTGGATTCAATAAAGAGAATGGTGGGATTTGGGTCAACGCTCTCCTGGACCGTCTTGGAACTGCCACAGAAACCATTTCATCGCTCTAACAGCTCTGAGTCGCCATGTGTCTCCGAATCTGGTTCCGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGATAAAGAGAAGGGACGAAACGATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATTCTCAGATGTCGCATTCCACCCATCAGCAGTCAGTGCTGGATGCTGCAAACCAGGGAATCTGGTTTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E537715" ref_strand="+" ref_description="SGN-E537715 [TUS-56-H9]">
      <seq>ctgaatccggttctgacatatacagcaagcgagaagtgatacaaaagctgaggctacagttaaagagaagggacgaaacaatattagagatgcaagaacagattgtagagttgcaagcttctctcaatgctcagatgtcgcattctgctcatcagcagtcattgctggatgctgccaacagggatctgtttgattcggagagagagatacagaggctgaggaaggctattgcagatcattgtgttggacaagtaggttcgtgcgataagcccccaacagtacctgtatggccagctgaagtccgttatggtcatcatactaacggccaccttgaagttgataggaattcagatacttcagagaagggaagaggagatggagaaaggtttgaaatgctgaagcgcgaaaaagatgagttgaaagaagtgatcgaagggaaggattatctgatcaagaactacaaggagcaaaccgtcgagctttcaatcaaggtcaaggaactgcaacagagactggatgctcagctcccaaacattttgtagccgcgtcgttagagttgtgtattcttttgtttgcttcccattctcttgattgattttaaagcttcatgacatgggacttgctattttctcagttttatctgagttttttctcccctccccctccctccacctttctgttttgtggtcatcatgtcgacgaaccgattttcgatataccttctcttagtattagtagattgagtttgaggattgccctcctgtgttgctgaacatggtaaaaatggtcatcatgcattgaaaaaatttcatctaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="106011" stop="107429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106311" g_stop="107133" g_length="823"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="823" r_length="823" r_score="0.988"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E537715" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>823</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E537715" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106311" e_stop="107133"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTGAATCCGGTTCTGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGTTAAAGAGAAGGGACGAAACAATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCATCAGCAGTCATTGCTGGATGCTGCCAACAGGGATCTGTTTGATTCGGAGAGAGAGATACAGAGGCTGAGGAAGGCTATTGCAGATCATTGTGTTGGACAAGTAGGTTCGTGCGATAAGCCCCCAACAGTACCTGTATGGCCAGCTGAAGTCCGTTATGGTCATCATACTAACGGCCACCTTGAAGTTGATAGGAATTCAGATACTTCAGAGAAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGTTGAAAGAAGTGATCGAAGGGAAGGATTATCTGATCAAGAACTACAAGGAGCAAACCGTCGAGCTTTCAATCAAGGTCAAGGAACTGCAACAGAGACTGGATGCTCAGCTCCCAAACATTTTGTAGCCGCGTCGTTAGAGTTGTGTATTCTTTTGTTTGCTTCCCATTCTCTTGATTGATTTTAAAGCTTCATGACATGGGACTTGCTATTTTCTCAGTTTTATCTGAGTTTTTTCTCCCCTCCCCCTCCCTCCACCTTTCTGTTTTGTGTTCATCATGTCGACGAACCGATTTTCGATATACCTTCTCTTAGTATTAGTAGATTGAGTTTGAGGATTGCCCTCCTGTGTTGCTGAACAT-GTAAAAATGGTTCATCATGCATTGAAAAATTTTCATCTATATATTCA</genome_strand>
        <mrna_strand>CTGAATCCGGTTCTGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGTTAAAGAGAAGGGACGAAACAATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCATCAGCAGTCATTGCTGGATGCTGCCAACAGGGATCTGTTTGATTCGGAGAGAGAGATACAGAGGCTGAGGAAGGCTATTGCAGATCATTGTGTTGGACAAGTAGGTTCGTGCGATAAGCCCCCAACAGTACCTGTATGGCCAGCTGAAGTCCGTTATGGTCATCATACTAACGGCCACCTTGAAGTTGATAGGAATTCAGATACTTCAGAGAAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGTTGAAAGAAGTGATCGAAGGGAAGGATTATCTGATCAAGAACTACAAGGAGCAAACCGTCGAGCTTTCAATCAAGGTCAAGGAACTGCAACAGAGACTGGATGCTCAGCTCCCAAACATTTTGTAGCCGCGTCGTTAGAGTTGTGTATTCTTTTGTTTGCTTCCCATTCTCTTGATTGATTTTAAAGCTTCATGACATGGGACTTGCTATTTTCTCAGTTTTATCTGAGTTTTTTCTCCCCTCCCCCTCCCTCCACCTTTCTGTTTTGTGGTCATCATGTCGACGAACCGATTTTCGATATACCTTCTCTTAGTATTAGTAGATTGAGTTTGAGGATTGCCCTCCTGTGTTGCTGAACATGGTAAAAATGG-TCATCATGCATTGAAAAAATTTCATCTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E266946" ref_strand="+" ref_description="SGN-E266946 [cLEI-7-B15]">
      <seq>tgaatccggttctgacatatacagcaagcgagaagtgatacaaaagctgaggctacagttaaagagaagggacgaaacaatattagagatgcaagaacagattgtagagttgcaagcttctctcaatgctcagatgtcgcattctgctcatcagcagtcattgctggatgctgccaacagggatctgtttgattcggagagagagatacagaggctgaggaaggctattgcagatcattgtgttggacaagtaggttcgtgcgataagcccccaacagtacctgtatggccagctgaagtccgttatggtcatcatactaacggccaccttgaagttgataggaattcagatacttcagagaagggaagaggagatggagaaaggtttgaaatgctgaagcgcgaaaaagatgagttgaaagaagtgatcgaagggaaggattatctgatcaagaactacaaggagcaaaccgtcgagctttcaatcaaggtcaaggaactgcaacagagactggatgctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="106012" stop="107133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106312" g_stop="106833" g_length="522"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="522" r_length="522" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E266946" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>522</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E266946" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106312" e_stop="106833"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAATCCGGTTCTGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGTTAAAGAGAAGGGACGAAACAATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCATCAGCAGTCATTGCTGGATGCTGCCAACAGGGATCTGTTTGATTCGGAGAGAGAGATACAGAGGCTGAGGAAGGCTATTGCAGATCATTGTGTTGGACAAGTAGGTTCGTGCGATAAGCCCCCAACAGTACCTGTATGGCCAGCTGAAGTCCGTTATGGTCATCATACTAACGGCCACCTTGAAGTTGATAGGAATTCAGATACTTCAGAGAAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGTTGAAAGAAGTGATCGAAGGGAAGGATTATCTGATCAAGAACTACAAGGAGCAAACCGTCGAGCTTTCAATCAAGGTCAAGGAACTGCAACAGAGACTGGATGCTCA</genome_strand>
        <mrna_strand>TGAATCCGGTTCTGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGTTAAAGAGAAGGGACGAAACAATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCATCAGCAGTCATTGCTGGATGCTGCCAACAGGGATCTGTTTGATTCGGAGAGAGAGATACAGAGGCTGAGGAAGGCTATTGCAGATCATTGTGTTGGACAAGTAGGTTCGTGCGATAAGCCCCCAACAGTACCTGTATGGCCAGCTGAAGTCCGTTATGGTCATCATACTAACGGCCACCTTGAAGTTGATAGGAATTCAGATACTTCAGAGAAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGTTGAAAGAAGTGATCGAAGGGAAGGATTATCTGATCAAGAACTACAAGGAGCAAACCGTCGAGCTTTCAATCAAGGTCAAGGAACTGCAACAGAGACTGGATGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E544617" ref_strand="-" ref_description="SGN-E544617 [TUS-67-A17]">
      <seq>agagttgcaagcttctctcaatgctcagatgtggcattctgctcatcagcagtcattgctggatgctgccaacagggatctgtttgattcggagagagagatacagagtctgaggaaggctattgcagatcattgtgttggacaagtaggttcgtgcgataagcccccaacagtacttgtatggccagctgaagtccgttatggtcatcattctaacggccaccttgaagttgataggaattcagatacttcagagaagggaagaggagatggagaaaggtttgaaatgctgaagcgcgaaaaagatgagttgaaagaagtgatcgaagggaaggattatctgatcaagaactacaaggagcaaaccgtcgagctttcaatcaaggtcaaggaactgcaacagagactggatgctcagctcccaaacattttgtagccgcgtcgttagagttgtgtattcttttgtttgcttcccattctcttgattgattttaaagcttcatgacatgggacttgctattttctcagttttatctgagttttttctcccctccccctccctccacctttctgttttgtgttcatcatgtcgacgaaccgattttcgatataccttctcttagtattagtagattgagtttgaggattgccctcctgtgttgctgaacatgtaaaaatggttcatcatgcattgaaaaattttcatctatatattcaagagacttttgctcaaaaaaaaagaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="106117" stop="107448"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106417" g_stop="107148" g_length="732"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="732" r_length="732" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="733" polyA_stop="744"/>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E544617" ref_strand="-">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="0.984" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E544617" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="106417" e_stop="107148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCATCAGCAGTCATTGCTGGATGCTGCCAACAGGGATCTGTTTGATTCGGAGAGAGAGATACAGAGGCTGAGGAAGGCTATTGCAGATCATTGTGTTGGACAAGTAGGTTCGTGCGATAAGCCCCCAACAGTACCTGTATGGCCAGCTGAAGTCCGTTATGGTCATCATACTAACGGCCACCTTGAAGTTGATAGGAATTCAGATACTTCAGAGAAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGTTGAAAGAAGTGATCGAAGGGAAGGATTATCTGATCAAGAACTACAAGGAGCAAACCGTCGAGCTTTCAATCAAGGTCAAGGAACTGCAACAGAGACTGGATGCTCAGCTCCCAAACATTTTGTAGCCGCGTCGTTAGAGTTGTGTATTCTTTTGTTTGCTTCCCATTCTCTTGATTGATTTTAAAGCTTCATGACATGGGACTTGCTATTTTCTCAGTTTTATCTGAGTTTTTTCTCCCCTCCCCCTCCCTCCACCTTTCTGTTTTGTGTTCATCATGTCGACGAACCGATTTTCGATATACCTTCTCTTAGTATTAGTAGATTGAGTTTGAGGATTGCCCTCCTGTGTTGCTGAACATGTAAAAATGGTTCATCATGCATTGAAAAATTTTCATCTATATATTCAAGAGACTTTTGCTCA</genome_strand>
        <mrna_strand>AGAGTTGCAAGCTTCTCTCAATGCTCAGATGTGGCATTCTGCTCATCAGCAGTCATTGCTGGATGCTGCCAACAGGGATCTGTTTGATTCGGAGAGAGAGATACAGAGTCTGAGGAAGGCTATTGCAGATCATTGTGTTGGACAAGTAGGTTCGTGCGATAAGCCCCCAACAGTACTTGTATGGCCAGCTGAAGTCCGTTATGGTCATCATTCTAACGGCCACCTTGAAGTTGATAGGAATTCAGATACTTCAGAGAAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGTTGAAAGAAGTGATCGAAGGGAAGGATTATCTGATCAAGAACTACAAGGAGCAAACCGTCGAGCTTTCAATCAAGGTCAAGGAACTGCAACAGAGACTGGATGCTCAGCTCCCAAACATTTTGTAGCCGCGTCGTTAGAGTTGTGTATTCTTTTGTTTGCTTCCCATTCTCTTGATTGATTTTAAAGCTTCATGACATGGGACTTGCTATTTTCTCAGTTTTATCTGAGTTTTTTCTCCCCTCCCCCTCCCTCCACCTTTCTGTTTTGTGTTCATCATGTCGACGAACCGATTTTCGATATACCTTCTCTTAGTATTAGTAGATTGAGTTTGAGGATTGCCCTCCTGTGTTGCTGAACATGTAAAAATGGTTCATCATGCATTGAAAAATTTTCATCTATATATTCAAGAGACTTTTGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E537713" ref_strand="+" ref_description="SGN-E537713 [TUS-56-H9]">
      <seq>tttctttttttagatgaaaatttttcaatgcatgatgaaccatttttacatgttcagcaacacaggagggcaatcctcaaactcaatctactaatactaagagaaggtatatcgaaaatcggttcgtcgacatgatgaacacaaaacagaaaggtggagggagggggaggggacaaaaaactcanataaaactganaaaatagcaagtcccatgtcatgaagctttaaaatcaatcaagagaatgggaagcaaacaaaagaatacacaactctaacgacgcggctacaaaatgtttgggagctgagcatccagtctctgttgcagttccttgaccttgattgaaagctcgacggtttgctccttgtagttcttgatcagataatccttcccttcgatcacttctttcaactcatctttttcgcgcttcagcatttcaaacctttctccatctcctcttcccttctctgaagtatctgaattcctatcaacttcaaggtggccgttagtatgatgaccataacggacttcagctggccatacaggtactgttgggggcttatcgcacgaacctacttgtccaacacaatggatctgcaatagccttcc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="107429" stop="106230"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107135" g_stop="106530" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="607" r_length="607" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E537713" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E537713" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107135" e_stop="106530"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGAATATATAGATGAAAATTTTTCAATGCATGATGAACCATTTTTACATGTTCAGCAACACAGGAGGGCAATCCTCAAACTCAATCTACTAATACTAAGAGAAGGTATATCGAAAATCGGTTCGTCGACATGATGAACACAAAACAGAAAGGTGGAGGGAGGGGGAGGGGAGAAAAAACTCAGATAAAACTGAGAAAATAGCAAGTCCCATGTCATGAAGCTTTAAAATCAATCAAGAGAATGGGAAGCAAACAAAAGAATACACAACTCTAACGACGCGGCTACAAAATGTTTGGGAGCTGAGCATCCAGTCTCTGTTGCAGTTCCTTGACCTTGATTGAAAGCTCGACGGTTTGCTCCTTGTAGTTCTTGATCAGATAATCCTTCCCTTCGATCACTTCTTTCAACTCATCTTTTTCGCGCTTCAGCATTTCAAACCTTTCTCCATCTCCTCTTCCCTTCTCTGAAGTATCTGAATTCCTATCAACTTCAAGGTGGCCGTTAGTATGATGACCATAACGGACTTCAGCTGGCCATACAGGTACTGTTGGGGGCTTATCGCACGAACCTACTTGTCCAACACAAT-GATCTGCAATAGCCTTCC</genome_strand>
        <mrna_strand>TTTCTTTTTTTAGATGAAAATTTTTCAATGCATGATGAACCATTTTTACATGTTCAGCAACACAGGAGGGCAATCCTCAAACTCAATCTACTAATACTAAGAGAAGGTATATCGAAAATCGGTTCGTCGACATGATGAACACAAAACAGAAAGGTGGAGGGAGGGGGAGGGGACAAAAAACTCANATAAAACTGANAAAATAGCAAGTCCCATGTCATGAAGCTTTAAAATCAATCAAGAGAATGGGAAGCAAACAAAAGAATACACAACTCTAACGACGCGGCTACAAAATGTTTGGGAGCTGAGCATCCAGTCTCTGTTGCAGTTCCTTGACCTTGATTGAAAGCTCGACGGTTTGCTCCTTGTAGTTCTTGATCAGATAATCCTTCCCTTCGATCACTTCTTTCAACTCATCTTTTTCGCGCTTCAGCATTTCAAACCTTTCTCCATCTCCTCTTCCCTTCTCTGAAGTATCTGAATTCCTATCAACTTCAAGGTGGCCGTTAGTATGATGACCATAACGGACTTCAGCTGGCCATACAGGTACTGTTGGGGGCTTATCGCACGAACCTACTTGTCCAACACAATGGATCTGCAATAGCCTTCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E251919" ref_strand="+" ref_description="SGN-E251919 [cLEG-14-K9]">
      <seq>caaccaaaatcaccatttctctaaaccctattttcttcttcttctcttgcatttttccaaaatctcaaaaattagtaagaagagagatcaggaagcaacaaataaggatgaagggtggtaccagttcagatcaattggcacgacagtaagccagttttgtgccttgattttcaccacctcaccggcgttattgctactggtggcgccgacctatgatatcaagatgtgggtgattgattctgaagaaaatgaaaagaaagcgcccttcagttacatacccaggctagcctttcttacccatagtggtgcctgtgaatgcctcttcggttctccccttcaggagagcatttggcctctggtgcccgatggcggcgagctcatcatttggaagctaccattcttcagatgaccagcaaaacatggaaagtcctaaagaccgttatcatttcaccggaaggatgtattggacttgcagtggtctgctgatggttcttttttaatttctggttctgttgataattcatgcatcgtatgggatgtcaacaaaggttctgttcatcagattttggatgctcatttgcactatgtgcaaggtgtggcatgggatc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="107215" stop="111768"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107515" g_stop="107734" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="223" r_length="223" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107735" i_stop="109073" i_length="1339">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.990" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109074" g_stop="109185" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="340" r_length="117" r_score="0.911"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109186" i_stop="110269" i_length="1084">
            <donor d_prob="0.952" d_score="0.87"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110270" g_stop="110296" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="368" r_length="28" r_score="0.926"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110297" i_stop="110376" i_length="80">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.882" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110377" g_stop="110449" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="444" r_length="76" r_score="0.918"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="110450" i_stop="111220" i_length="771">
            <donor d_prob="0.757" d_score="0.87"/>
            <acceptor a_prob="0.486" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111221" g_stop="111324" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="445" r_stop="548" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="111325" i_stop="111408" i_length="84">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.230" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="111409" g_stop="111468" g_length="60"/>
          <reference_exon_boundary r_type="cDNA" r_start="549" r_stop="608" r_length="60" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E251919" ref_strand="+">
        <total_alignment_score>0.961</total_alignment_score>
        <cumulative_length_of_scored_exons>596</cumulative_length_of_scored_exons>
        <coverage percentage="0.980" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251919" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107515" e_stop="107734"/>
          <exon e_start="109074" e_stop="109185"/>
          <exon e_start="110270" e_stop="110296"/>
          <exon e_start="110377" e_stop="110449"/>
          <exon e_start="111221" e_stop="111324"/>
          <exon e_start="111409" e_stop="111468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAA-CAAAATCACCATTTCTCTAAACCCTATTTTCTTCTTCTTCTCTTGCATTTTTCCAAAATCTCAAAAATTAGTAAGAAGAGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTA-CAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGA-CTATGATATCAAGGTTAAAAATTACGATTTTACCCTTTTGAGCCTTGTGTTTCTTAAGTTGGTTTGTCTTATATGCTTCGATTATGCTAATGCTGGATATTGGTTTTAATAATTTTAGTTGGTTAGTCGGATGATATCAACTTTTCATTAATTGATTAATTAATAGTTTGAACTTGGTTTTTGTTTATTGGGTATTGAGATTTTAAGTTGGTGTAAGAATGTTTCAAATTCAAAGGAAATGAAAACACAGTAGAGGGAAATGAAGAGGAAATCTGCATTTTTGTTAGTTAGTTAATAGTTTGAATTTAGTTTTTGTCAACTCGGTAATGCGATTGGAAGATAGTGTAAGAAATTTTGCAGTTCAAAGGAAATGGCAACACAGTAAAAGGGGGAAATGAAGAAGAAAATAGGAAAGAGGGATGTGAAGAAATAACAAAAATTCTAGAAGCGGAAAAGAGGATTTTTTTCTCCATTATGTCCTCGTTTTCTTTGAGCGAATGGGAGGAAATGTGTTTACCATGATTGCATAGATAGCAACAATATGCCGGTACATTTGAATTATTTAGAACAGGGGTGCACATCCCAATTGAATAGTAAAAGACATAGAAAGGGAAAGAGAGGAGCAAAATCTCATTCACTTTCTTAGTATGGTCTCAATTGGCCCAGAAAGGTAACCAAGAGTTGACACTTCAGACACAGGTTTATAATCATCTTCCTTGCAGGACAATATAAATGTTGGGTATGCATATGATTCCATATTCTCAACATGTGATATTCTTACCAATTGAGGATTTGTCATTTCAATGGGTGCCCACATTAGTAGAATTACAGAACTAGGTATGAATTTTAGTGTTTTCTTTACTGGACCAGATTCACCATCCAGTTAACCAAGCAACTAAACTCAGGAGTTTCATGATCCCCTTACCTCTGACCCAAAAAACTCAACTTTATTGATTTAATTCATAATGACTGAGTAGGAGGATGTTTATGCTTGTGATTTGTTTCTCTGCAACCTTGAACTATAAGCCGGTTAGTGATGGTGGCCTAATAGCTAATGCAAACTCTTAAAACCTATCCGGTTCTTCTAACTCAACAGAATAAATCACATTTAATATAGATTGTGTTAGTGTCTGAAATCTTACCATCTACTTGAACTTGTTTACTTCAACTTCAACCTGAAGTAACTCTTGCTTGACGAGTGTGAATTCTTTTGCTTCAGATTGCAAAGTCCTTGCATGTTGACATATTAATCACTGGTCTCAAAGTTTGCTGATATTTTTAAAGGACTTCCATATTATTATTTTATGCTTGGGATGAAATATATAACATCTGGTTCAAAATAAATTCAACAGATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCG-CCTTCAGTTACATA-CCAGGCTAGCCTTTCTTA-CCATAGTGGTG-CTGTGAATG-CTCTTCGGTTCTCCCCTTCAGGTGAAGTTGTTCATCTTGCTTTATTAAAAGATTCTGGTAGCTAATCACTGAAAGCATTAATTTTACAAAGGCAAGAATTGGTACATTTTTATATCCTGTCGAGTGTTGGAGTTTCATCTGAAGCTGCAGGTTGTTTTGTGCAGTTTATGAATATGGTTGTTTGACTGACTTGGCTTTCTTCTCTCTGTATCTGTATACCTCCCTGAAGAAAAATGTAATATTGGTTTTAGAGAGGGTCAGCGTTGGTAATGTTATTGCTAACTTTACTAAGTTGCAATTAGCTGTACATTTGGTTAAAAAAATTCCGTTTTTTCTTTCAATTTTTACCTTGTTTGAAATAGACTTGTAGGCTTTCATGTTAGTTTCAGTCTTTCAGAAAGCTGATGGCCTGTTAACCAATTTCTTGAAATAATAACGCTGTGAGAAGAATCGTTTCCTGGTGGACTATGTATTGCTTTAAACATTAATATTAGAAAGTTGGAATATCAGTTGTAGATATTCTATTAGCTTGAGTGATTCTCTGGGATTGCTATAGGTTATGAAATTCCTGCAGAATCTTTTTGCTGGATCTGTATTTTTGAGCACTTGTTGATCTGAGAACTAGAGATACAGAGTGGAGTCGGAGCCTCTTTCGTAGTCAGATTTGTTAGATAGTGAGTTGCAATGACATTCACGAAATCATCATTACCTTTGACTATGCAGAGAAGGTTGCTCGTACAGTCTTACTATAAATGAAATAACAGAAGATAACAATGTTTCTCTCAGTATTTGTAGCATTTGATTCAACATGTCTGAAGCACAACTTGATGGAGAATCACGGTGATAGTCTTTTGGGGTTTTTACTTGCTTCTAGGTCTATGCCATCTTACAAGCCTCACTTCTCTGGGTTGATCAATACATTGGAAATGTTAATATGTAACTGTGGTTACTTCATTTTTAGCTACCTTTTCATTTATCAAAACTTCTATTATTACTGAACTTCCAGTGTATGCCTCCATCTGATTTCTTAAACTGTTTGATGTTATACTTGTACCTATCTAGTCAGCCAGCAAACTGAATTATCATTTTTTTTGGTAATATGCAGGAGAGCATTTGGCCTCTGGTG-CCGATGGTATAGACTTGTCCCTCTAAATCTCTTAATTTAGTCTGGATCAAATAATTTAACAATATCTACAACTGCTCCTGATGTAGGCGGCGAGCTCATCATTTGGAAGCTA-CATTCTTCAGATGA-CAGCAAAACATGGAAAGTCCTAAAGA-CGTTATCGTAAGCCTTTCATTTGGTCTTATCGCCTTTGTGAATTTCTAAGCACTCATAAAATAGCCGCAATCGCTCCATGGAACATTAGCTACTGCTTTTGTTTTATTCTTATGGAAAGCCAGAGAATTATTAGAACACACTGTTTGGGAATGTCCTGCATTTTTCATTGTGATCTTTATCCTTTTTCTCTTGTTAAATAAATTTTTAAATCTGATGTAGGAAGAAAGGAAAAGTTATAGTTGGCATTTCAGTAGCGGACTTAAGTTAGTGGATGCAGTTGGTGGAAGAGGGTTTTGCTTTCGGGATTATAGGATATTATAACCACATGAAATAGTTGAAGTGTATGATAACACAGCGTTGATTATAGAAAAAGCAAGTCATGTTGATTATATTCTTTCATTTTTTTAATAAAATAAAGTAAATTAACATGATCATATTCTAAGTGTCTATTTGTTTGGATTGTATTTTGGTTTAAGCAGAATGTTGCAATAAACCAGCATATTTATAATAATCCCTAGTTTTGCAGGGAAAAGCAGCTTTGTGTTAATAACATTTAGCAAGAATTTTATTGTATATATAGTTAACTTTTGTTAACCTCTACTTTAAATAATAAATAAACACTATACAAATAATCCATAATATTTTAATAACCATATTAAACAAGACTTTTCAAATGTTAATCTATAACTTTGTATATAAGTCACAAAAGGAGCATAATCATTGTTGTCATGGAACTATTTCTAATTTGATACTAGTACTCATGAGTTCACTTCTCAGATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTAATTTCTGGTTCTGTTGATAATTCATGCATCGTATGGGATGTCAACAAAGGTAAAATTAAAGAGGATCTAACTTAAAGAGTTTTTGCTAAGATAAATAAAATTTATACTAACAGTTGGCCAGTTCCTTCATCAGGTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATC</genome_strand>
        <mrna_strand>CAACCAAAATCACCATTTCTCTAAACCCTATTTTCTTCTTCTTCTCTTGCATTTTTCCAAAATCTCAAAAATTAGTAAGAAGAGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTACCAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACCTATGATATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCGCCCTTCAGTTACATACCCAGGCTAGCCTTTCTTACCCATAGTGGTGCCTGTGAATGCCTCTTCGGTTCTCCCCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCATTTGGCCTCTGGTGCCCGATG................................................................................GCGGCGAGCTCATCATTTGGAAGCTACCATTCTTCAGATGACCAGCAAAACATGGAAAGTCCTAAAGACCGTTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTAATTTCTGGTTCTGTTGATAATTCATGCATCGTATGGGATGTCAACAAAG....................................................................................GTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E273234" ref_strand="+" ref_description="SGN-E273234 [cLEM-24-K17]">
      <seq>caaaatctcaaaaattagtaagaagagagatcaggaagcaacaaataaggatgaagggtggtacagttcagatcaattggcacgacagtaagccagttttgtgccttgattttcaccacctcaccggcgttattgctactggtggcgccgactatgatatcaagatgtgggtgattgattctgaagaaaatgaaaagaaagcgccttcagttacataccaggctagcctttcttaccatagtggtgctgtgaatgctcttcggttctccccttcaggagagcatttggcctctggtgccgatggcggcgagctcatcatttggaagctacattcttcagatgacagcaaaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="107271" stop="110727"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107571" g_stop="107734" g_length="164"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="164" r_length="164" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107735" i_stop="109073" i_length="1339">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109074" g_stop="109185" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="165" r_stop="276" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109186" i_stop="110269" i_length="1084">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110270" g_stop="110296" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="277" r_stop="303" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110297" i_stop="110376" i_length="80">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.882" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110377" g_stop="110427" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="354" r_length="51" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E273234" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E273234" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107571" e_stop="107734"/>
          <exon e_start="109074" e_stop="109185"/>
          <exon e_start="110270" e_stop="110296"/>
          <exon e_start="110377" e_stop="110427"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAAATCTCAAAAATTAGTAAGAAGAGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTACAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGATATCAAGGTTAAAAATTACGATTTTACCCTTTTGAGCCTTGTGTTTCTTAAGTTGGTTTGTCTTATATGCTTCGATTATGCTAATGCTGGATATTGGTTTTAATAATTTTAGTTGGTTAGTCGGATGATATCAACTTTTCATTAATTGATTAATTAATAGTTTGAACTTGGTTTTTGTTTATTGGGTATTGAGATTTTAAGTTGGTGTAAGAATGTTTCAAATTCAAAGGAAATGAAAACACAGTAGAGGGAAATGAAGAGGAAATCTGCATTTTTGTTAGTTAGTTAATAGTTTGAATTTAGTTTTTGTCAACTCGGTAATGCGATTGGAAGATAGTGTAAGAAATTTTGCAGTTCAAAGGAAATGGCAACACAGTAAAAGGGGGAAATGAAGAAGAAAATAGGAAAGAGGGATGTGAAGAAATAACAAAAATTCTAGAAGCGGAAAAGAGGATTTTTTTCTCCATTATGTCCTCGTTTTCTTTGAGCGAATGGGAGGAAATGTGTTTACCATGATTGCATAGATAGCAACAATATGCCGGTACATTTGAATTATTTAGAACAGGGGTGCACATCCCAATTGAATAGTAAAAGACATAGAAAGGGAAAGAGAGGAGCAAAATCTCATTCACTTTCTTAGTATGGTCTCAATTGGCCCAGAAAGGTAACCAAGAGTTGACACTTCAGACACAGGTTTATAATCATCTTCCTTGCAGGACAATATAAATGTTGGGTATGCATATGATTCCATATTCTCAACATGTGATATTCTTACCAATTGAGGATTTGTCATTTCAATGGGTGCCCACATTAGTAGAATTACAGAACTAGGTATGAATTTTAGTGTTTTCTTTACTGGACCAGATTCACCATCCAGTTAACCAAGCAACTAAACTCAGGAGTTTCATGATCCCCTTACCTCTGACCCAAAAAACTCAACTTTATTGATTTAATTCATAATGACTGAGTAGGAGGATGTTTATGCTTGTGATTTGTTTCTCTGCAACCTTGAACTATAAGCCGGTTAGTGATGGTGGCCTAATAGCTAATGCAAACTCTTAAAACCTATCCGGTTCTTCTAACTCAACAGAATAAATCACATTTAATATAGATTGTGTTAGTGTCTGAAATCTTACCATCTACTTGAACTTGTTTACTTCAACTTCAACCTGAAGTAACTCTTGCTTGACGAGTGTGAATTCTTTTGCTTCAGATTGCAAAGTCCTTGCATGTTGACATATTAATCACTGGTCTCAAAGTTTGCTGATATTTTTAAAGGACTTCCATATTATTATTTTATGCTTGGGATGAAATATATAACATCTGGTTCAAAATAAATTCAACAGATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAGGTGAAGTTGTTCATCTTGCTTTATTAAAAGATTCTGGTAGCTAATCACTGAAAGCATTAATTTTACAAAGGCAAGAATTGGTACATTTTTATATCCTGTCGAGTGTTGGAGTTTCATCTGAAGCTGCAGGTTGTTTTGTGCAGTTTATGAATATGGTTGTTTGACTGACTTGGCTTTCTTCTCTCTGTATCTGTATACCTCCCTGAAGAAAAATGTAATATTGGTTTTAGAGAGGGTCAGCGTTGGTAATGTTATTGCTAACTTTACTAAGTTGCAATTAGCTGTACATTTGGTTAAAAAAATTCCGTTTTTTCTTTCAATTTTTACCTTGTTTGAAATAGACTTGTAGGCTTTCATGTTAGTTTCAGTCTTTCAGAAAGCTGATGGCCTGTTAACCAATTTCTTGAAATAATAACGCTGTGAGAAGAATCGTTTCCTGGTGGACTATGTATTGCTTTAAACATTAATATTAGAAAGTTGGAATATCAGTTGTAGATATTCTATTAGCTTGAGTGATTCTCTGGGATTGCTATAGGTTATGAAATTCCTGCAGAATCTTTTTGCTGGATCTGTATTTTTGAGCACTTGTTGATCTGAGAACTAGAGATACAGAGTGGAGTCGGAGCCTCTTTCGTAGTCAGATTTGTTAGATAGTGAGTTGCAATGACATTCACGAAATCATCATTACCTTTGACTATGCAGAGAAGGTTGCTCGTACAGTCTTACTATAAATGAAATAACAGAAGATAACAATGTTTCTCTCAGTATTTGTAGCATTTGATTCAACATGTCTGAAGCACAACTTGATGGAGAATCACGGTGATAGTCTTTTGGGGTTTTTACTTGCTTCTAGGTCTATGCCATCTTACAAGCCTCACTTCTCTGGGTTGATCAATACATTGGAAATGTTAATATGTAACTGTGGTTACTTCATTTTTAGCTACCTTTTCATTTATCAAAACTTCTATTATTACTGAACTTCCAGTGTATGCCTCCATCTGATTTCTTAAACTGTTTGATGTTATACTTGTACCTATCTAGTCAGCCAGCAAACTGAATTATCATTTTTTTTGGTAATATGCAGGAGAGCATTTGGCCTCTGGTGCCGATGGTATAGACTTGTCCCTCTAAATCTCTTAATTTAGTCTGGATCAAATAATTTAACAATATCTACAACTGCTCCTGATGTAGGCGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACAT</genome_strand>
        <mrna_strand>CAAAATCTCAAAAATTAGTAAGAAGAGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTACAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGATATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCATTTGGCCTCTGGTGCCGATG................................................................................GCGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E425960" ref_strand="+" ref_description="SGN-E425960 [STM-45-H12]">
      <seq>gagagatcaggaagcaacaagaagaatgaagggtggtacagttcagatcaattggcacgacagcaagcctgttttgtgccttgattttcaccacctcaccggcgttattgctactggtggcgccgactatgacatcaagatgtgggtgattaattctgaagaaaatgaaaagaaagcgccttcagttacataccaggctagcctttcttaccatagtggtgctgtgaatgctcttcggttctccccttcaggagagcatttagcctctggtgcagatggtggcgagctcatcatttggaagctacattcttcagatgacagcaaaacatggaaggtcctaaagacgttatcatttcaccggaaggatgtattggacttgcagtggtctgctgatggttcttttttgatttctggttctgttgataattcgtgcatcatatgggatgtcaacaaaggttctgttcatcagattttggatgctcatttgcactatgtgcaaggtgtggcatgggatccattgtccaagtatactgcctcactcagttcagatagatcttgccggatttacagcaatagaccatctaaaacaaaaggagttgagaagttgaattttgtgtgtcaacatgtcattatgaaagttgaaccacaactgccggatgagtccaagtctactaaaaatcatctctttcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="107295" stop="111942"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107595" g_stop="107734" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.957"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107735" i_stop="109073" i_length="1339">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109074" g_stop="109185" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="251" r_length="112" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109186" i_stop="110269" i_length="1084">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110270" g_stop="110296" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="278" r_length="27" r_score="0.926"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110297" i_stop="110376" i_length="80">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.882" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110377" g_stop="110449" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="351" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="110450" i_stop="111220" i_length="771">
            <donor d_prob="0.757" d_score="0.98"/>
            <acceptor a_prob="0.486" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111221" g_stop="111324" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="455" r_length="104" r_score="0.971"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="111325" i_stop="111408" i_length="84">
            <donor d_prob="0.932" d_score="0.94"/>
            <acceptor a_prob="0.230" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="111409" g_stop="111620" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="667" r_length="212" r_score="0.995"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="111621" i_stop="111708" i_length="88">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.733" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="111709" g_stop="111736" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="668" r_stop="695" r_length="28" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E425960" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E425960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107595" e_stop="107734"/>
          <exon e_start="109074" e_stop="109185"/>
          <exon e_start="110270" e_stop="110296"/>
          <exon e_start="110377" e_stop="110449"/>
          <exon e_start="111221" e_stop="111324"/>
          <exon e_start="111409" e_stop="111620"/>
          <exon e_start="111709" e_stop="111736"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTACAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGATATCAAGGTTAAAAATTACGATTTTACCCTTTTGAGCCTTGTGTTTCTTAAGTTGGTTTGTCTTATATGCTTCGATTATGCTAATGCTGGATATTGGTTTTAATAATTTTAGTTGGTTAGTCGGATGATATCAACTTTTCATTAATTGATTAATTAATAGTTTGAACTTGGTTTTTGTTTATTGGGTATTGAGATTTTAAGTTGGTGTAAGAATGTTTCAAATTCAAAGGAAATGAAAACACAGTAGAGGGAAATGAAGAGGAAATCTGCATTTTTGTTAGTTAGTTAATAGTTTGAATTTAGTTTTTGTCAACTCGGTAATGCGATTGGAAGATAGTGTAAGAAATTTTGCAGTTCAAAGGAAATGGCAACACAGTAAAAGGGGGAAATGAAGAAGAAAATAGGAAAGAGGGATGTGAAGAAATAACAAAAATTCTAGAAGCGGAAAAGAGGATTTTTTTCTCCATTATGTCCTCGTTTTCTTTGAGCGAATGGGAGGAAATGTGTTTACCATGATTGCATAGATAGCAACAATATGCCGGTACATTTGAATTATTTAGAACAGGGGTGCACATCCCAATTGAATAGTAAAAGACATAGAAAGGGAAAGAGAGGAGCAAAATCTCATTCACTTTCTTAGTATGGTCTCAATTGGCCCAGAAAGGTAACCAAGAGTTGACACTTCAGACACAGGTTTATAATCATCTTCCTTGCAGGACAATATAAATGTTGGGTATGCATATGATTCCATATTCTCAACATGTGATATTCTTACCAATTGAGGATTTGTCATTTCAATGGGTGCCCACATTAGTAGAATTACAGAACTAGGTATGAATTTTAGTGTTTTCTTTACTGGACCAGATTCACCATCCAGTTAACCAAGCAACTAAACTCAGGAGTTTCATGATCCCCTTACCTCTGACCCAAAAAACTCAACTTTATTGATTTAATTCATAATGACTGAGTAGGAGGATGTTTATGCTTGTGATTTGTTTCTCTGCAACCTTGAACTATAAGCCGGTTAGTGATGGTGGCCTAATAGCTAATGCAAACTCTTAAAACCTATCCGGTTCTTCTAACTCAACAGAATAAATCACATTTAATATAGATTGTGTTAGTGTCTGAAATCTTACCATCTACTTGAACTTGTTTACTTCAACTTCAACCTGAAGTAACTCTTGCTTGACGAGTGTGAATTCTTTTGCTTCAGATTGCAAAGTCCTTGCATGTTGACATATTAATCACTGGTCTCAAAGTTTGCTGATATTTTTAAAGGACTTCCATATTATTATTTTATGCTTGGGATGAAATATATAACATCTGGTTCAAAATAAATTCAACAGATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAGGTGAAGTTGTTCATCTTGCTTTATTAAAAGATTCTGGTAGCTAATCACTGAAAGCATTAATTTTACAAAGGCAAGAATTGGTACATTTTTATATCCTGTCGAGTGTTGGAGTTTCATCTGAAGCTGCAGGTTGTTTTGTGCAGTTTATGAATATGGTTGTTTGACTGACTTGGCTTTCTTCTCTCTGTATCTGTATACCTCCCTGAAGAAAAATGTAATATTGGTTTTAGAGAGGGTCAGCGTTGGTAATGTTATTGCTAACTTTACTAAGTTGCAATTAGCTGTACATTTGGTTAAAAAAATTCCGTTTTTTCTTTCAATTTTTACCTTGTTTGAAATAGACTTGTAGGCTTTCATGTTAGTTTCAGTCTTTCAGAAAGCTGATGGCCTGTTAACCAATTTCTTGAAATAATAACGCTGTGAGAAGAATCGTTTCCTGGTGGACTATGTATTGCTTTAAACATTAATATTAGAAAGTTGGAATATCAGTTGTAGATATTCTATTAGCTTGAGTGATTCTCTGGGATTGCTATAGGTTATGAAATTCCTGCAGAATCTTTTTGCTGGATCTGTATTTTTGAGCACTTGTTGATCTGAGAACTAGAGATACAGAGTGGAGTCGGAGCCTCTTTCGTAGTCAGATTTGTTAGATAGTGAGTTGCAATGACATTCACGAAATCATCATTACCTTTGACTATGCAGAGAAGGTTGCTCGTACAGTCTTACTATAAATGAAATAACAGAAGATAACAATGTTTCTCTCAGTATTTGTAGCATTTGATTCAACATGTCTGAAGCACAACTTGATGGAGAATCACGGTGATAGTCTTTTGGGGTTTTTACTTGCTTCTAGGTCTATGCCATCTTACAAGCCTCACTTCTCTGGGTTGATCAATACATTGGAAATGTTAATATGTAACTGTGGTTACTTCATTTTTAGCTACCTTTTCATTTATCAAAACTTCTATTATTACTGAACTTCCAGTGTATGCCTCCATCTGATTTCTTAAACTGTTTGATGTTATACTTGTACCTATCTAGTCAGCCAGCAAACTGAATTATCATTTTTTTTGGTAATATGCAGGAGAGCATTTGGCCTCTGGTGCCGATGGTATAGACTTGTCCCTCTAAATCTCTTAATTTAGTCTGGATCAAATAATTTAACAATATCTACAACTGCTCCTGATGTAGGCGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAAGTCCTAAAGACGTTATCGTAAGCCTTTCATTTGGTCTTATCGCCTTTGTGAATTTCTAAGCACTCATAAAATAGCCGCAATCGCTCCATGGAACATTAGCTACTGCTTTTGTTTTATTCTTATGGAAAGCCAGAGAATTATTAGAACACACTGTTTGGGAATGTCCTGCATTTTTCATTGTGATCTTTATCCTTTTTCTCTTGTTAAATAAATTTTTAAATCTGATGTAGGAAGAAAGGAAAAGTTATAGTTGGCATTTCAGTAGCGGACTTAAGTTAGTGGATGCAGTTGGTGGAAGAGGGTTTTGCTTTCGGGATTATAGGATATTATAACCACATGAAATAGTTGAAGTGTATGATAACACAGCGTTGATTATAGAAAAAGCAAGTCATGTTGATTATATTCTTTCATTTTTTTAATAAAATAAAGTAAATTAACATGATCATATTCTAAGTGTCTATTTGTTTGGATTGTATTTTGGTTTAAGCAGAATGTTGCAATAAACCAGCATATTTATAATAATCCCTAGTTTTGCAGGGAAAAGCAGCTTTGTGTTAATAACATTTAGCAAGAATTTTATTGTATATATAGTTAACTTTTGTTAACCTCTACTTTAAATAATAAATAAACACTATACAAATAATCCATAATATTTTAATAACCATATTAAACAAGACTTTTCAAATGTTAATCTATAACTTTGTATATAAGTCACAAAAGGAGCATAATCATTGTTGTCATGGAACTATTTCTAATTTGATACTAGTACTCATGAGTTCACTTCTCAGATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTAATTTCTGGTTCTGTTGATAATTCATGCATCGTATGGGATGTCAACAAAGGTAAAATTAAAGAGGATCTAACTTAAAGAGTTTTTGCTAAGATAAATAAAATTTATACTAACAGTTGGCCAGTTCCTTCATCAGGTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAATAGACCATCTAAAACAAAAGGAGTTGAGAAGTTGAATTTTGTGTGTCAACATGTCATTATGAAGGTTGAACCACAACTGCCGGATGAGTCCAAGGTCAAATATCATATCAGTTTCTCAATGTCTTCTATTTACAAGTGAATGTTAAATGCATAATAACTTTGGCGCTTCCAAATTCATGCAGTCTACTAAAAATCATCTCTTTCTTGATG</genome_strand>
        <mrna_strand>GAGAGATCAGGAAGCAAC-AAGAAGAATGAAGGGTGGTACAGTTCAGATCAATTGGCACGACAGCAAGCCTGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGACATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGGTGATTAATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCATTTAGCCTCTGGTGCAGATG................................................................................GTGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAGGTCCTAAAGACGTTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTGATTTCTGGTTCTGTTGATAATTCGTGCATCATATGGGATGTCAACAAAG....................................................................................GTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAATAGACCATCTAAAACAAAAGGAGTTGAGAAGTTGAATTTTGTGTGTCAACATGTCATTATGAAAGTTGAACCACAACTGCCGGATGAGTCCAAG........................................................................................TCTACTAAAAATCATCTCTTTCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E455725" ref_strand="+" ref_description="SGN-E455725 [cSTS-27-K7]">
      <seq>gagagatcaggaagcaacatgaagaatgaagggtggtacagttcacatcaattggcacgacagcaagcctgttttgtgccttgattttcaccacctcaccggcgttattgctactggtggcgccgactatgacatcaagatgtgggtgattaattctgaagaaaatgaaaagaaagcgccttcagttacataccaggctagcctttcttaccatagtggtgctgtgaatgctcttcggttctccccttcaggagagcatttagcctctggtgcagatggtggcgagctcatcatttggaagctacattcttcagatgacagcaaaacatggaaggtcctaaagacgttatcatttcaccggaaggatgtattggacttgcagtggtctgctgatggttcttttttgatttctggttctgttgataattcgtgcatcatatgggatgtcaacgaaggttctgttcatcagattttggatgctcatttgcactatgtgcaaagtgtggcatgggatccattgtccaagtatactgcctcactcagttcagatagatcttgccggatttacagcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="107307" stop="111826"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107595" g_stop="107734" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107735" i_stop="109073" i_length="1339">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109074" g_stop="109185" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="251" r_length="112" r_score="0.991"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109186" i_stop="110269" i_length="1084">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110270" g_stop="110296" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="278" r_length="27" r_score="0.926"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110297" i_stop="110376" i_length="80">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.882" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110377" g_stop="110449" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="351" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="110450" i_stop="111220" i_length="771">
            <donor d_prob="0.757" d_score="0.98"/>
            <acceptor a_prob="0.486" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111221" g_stop="111324" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="455" r_length="104" r_score="0.962"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="111325" i_stop="111408" i_length="84">
            <donor d_prob="0.932" d_score="0.92"/>
            <acceptor a_prob="0.230" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="111409" g_stop="111526" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="573" r_length="118" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E455725" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E455725" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107595" e_stop="107734"/>
          <exon e_start="109074" e_stop="109185"/>
          <exon e_start="110270" e_stop="110296"/>
          <exon e_start="110377" e_stop="110449"/>
          <exon e_start="111221" e_stop="111324"/>
          <exon e_start="111409" e_stop="111526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTACAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGATATCAAGGTTAAAAATTACGATTTTACCCTTTTGAGCCTTGTGTTTCTTAAGTTGGTTTGTCTTATATGCTTCGATTATGCTAATGCTGGATATTGGTTTTAATAATTTTAGTTGGTTAGTCGGATGATATCAACTTTTCATTAATTGATTAATTAATAGTTTGAACTTGGTTTTTGTTTATTGGGTATTGAGATTTTAAGTTGGTGTAAGAATGTTTCAAATTCAAAGGAAATGAAAACACAGTAGAGGGAAATGAAGAGGAAATCTGCATTTTTGTTAGTTAGTTAATAGTTTGAATTTAGTTTTTGTCAACTCGGTAATGCGATTGGAAGATAGTGTAAGAAATTTTGCAGTTCAAAGGAAATGGCAACACAGTAAAAGGGGGAAATGAAGAAGAAAATAGGAAAGAGGGATGTGAAGAAATAACAAAAATTCTAGAAGCGGAAAAGAGGATTTTTTTCTCCATTATGTCCTCGTTTTCTTTGAGCGAATGGGAGGAAATGTGTTTACCATGATTGCATAGATAGCAACAATATGCCGGTACATTTGAATTATTTAGAACAGGGGTGCACATCCCAATTGAATAGTAAAAGACATAGAAAGGGAAAGAGAGGAGCAAAATCTCATTCACTTTCTTAGTATGGTCTCAATTGGCCCAGAAAGGTAACCAAGAGTTGACACTTCAGACACAGGTTTATAATCATCTTCCTTGCAGGACAATATAAATGTTGGGTATGCATATGATTCCATATTCTCAACATGTGATATTCTTACCAATTGAGGATTTGTCATTTCAATGGGTGCCCACATTAGTAGAATTACAGAACTAGGTATGAATTTTAGTGTTTTCTTTACTGGACCAGATTCACCATCCAGTTAACCAAGCAACTAAACTCAGGAGTTTCATGATCCCCTTACCTCTGACCCAAAAAACTCAACTTTATTGATTTAATTCATAATGACTGAGTAGGAGGATGTTTATGCTTGTGATTTGTTTCTCTGCAACCTTGAACTATAAGCCGGTTAGTGATGGTGGCCTAATAGCTAATGCAAACTCTTAAAACCTATCCGGTTCTTCTAACTCAACAGAATAAATCACATTTAATATAGATTGTGTTAGTGTCTGAAATCTTACCATCTACTTGAACTTGTTTACTTCAACTTCAACCTGAAGTAACTCTTGCTTGACGAGTGTGAATTCTTTTGCTTCAGATTGCAAAGTCCTTGCATGTTGACATATTAATCACTGGTCTCAAAGTTTGCTGATATTTTTAAAGGACTTCCATATTATTATTTTATGCTTGGGATGAAATATATAACATCTGGTTCAAAATAAATTCAACAGATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAGGTGAAGTTGTTCATCTTGCTTTATTAAAAGATTCTGGTAGCTAATCACTGAAAGCATTAATTTTACAAAGGCAAGAATTGGTACATTTTTATATCCTGTCGAGTGTTGGAGTTTCATCTGAAGCTGCAGGTTGTTTTGTGCAGTTTATGAATATGGTTGTTTGACTGACTTGGCTTTCTTCTCTCTGTATCTGTATACCTCCCTGAAGAAAAATGTAATATTGGTTTTAGAGAGGGTCAGCGTTGGTAATGTTATTGCTAACTTTACTAAGTTGCAATTAGCTGTACATTTGGTTAAAAAAATTCCGTTTTTTCTTTCAATTTTTACCTTGTTTGAAATAGACTTGTAGGCTTTCATGTTAGTTTCAGTCTTTCAGAAAGCTGATGGCCTGTTAACCAATTTCTTGAAATAATAACGCTGTGAGAAGAATCGTTTCCTGGTGGACTATGTATTGCTTTAAACATTAATATTAGAAAGTTGGAATATCAGTTGTAGATATTCTATTAGCTTGAGTGATTCTCTGGGATTGCTATAGGTTATGAAATTCCTGCAGAATCTTTTTGCTGGATCTGTATTTTTGAGCACTTGTTGATCTGAGAACTAGAGATACAGAGTGGAGTCGGAGCCTCTTTCGTAGTCAGATTTGTTAGATAGTGAGTTGCAATGACATTCACGAAATCATCATTACCTTTGACTATGCAGAGAAGGTTGCTCGTACAGTCTTACTATAAATGAAATAACAGAAGATAACAATGTTTCTCTCAGTATTTGTAGCATTTGATTCAACATGTCTGAAGCACAACTTGATGGAGAATCACGGTGATAGTCTTTTGGGGTTTTTACTTGCTTCTAGGTCTATGCCATCTTACAAGCCTCACTTCTCTGGGTTGATCAATACATTGGAAATGTTAATATGTAACTGTGGTTACTTCATTTTTAGCTACCTTTTCATTTATCAAAACTTCTATTATTACTGAACTTCCAGTGTATGCCTCCATCTGATTTCTTAAACTGTTTGATGTTATACTTGTACCTATCTAGTCAGCCAGCAAACTGAATTATCATTTTTTTTGGTAATATGCAGGAGAGCATTTGGCCTCTGGTGCCGATGGTATAGACTTGTCCCTCTAAATCTCTTAATTTAGTCTGGATCAAATAATTTAACAATATCTACAACTGCTCCTGATGTAGGCGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAAGTCCTAAAGACGTTATCGTAAGCCTTTCATTTGGTCTTATCGCCTTTGTGAATTTCTAAGCACTCATAAAATAGCCGCAATCGCTCCATGGAACATTAGCTACTGCTTTTGTTTTATTCTTATGGAAAGCCAGAGAATTATTAGAACACACTGTTTGGGAATGTCCTGCATTTTTCATTGTGATCTTTATCCTTTTTCTCTTGTTAAATAAATTTTTAAATCTGATGTAGGAAGAAAGGAAAAGTTATAGTTGGCATTTCAGTAGCGGACTTAAGTTAGTGGATGCAGTTGGTGGAAGAGGGTTTTGCTTTCGGGATTATAGGATATTATAACCACATGAAATAGTTGAAGTGTATGATAACACAGCGTTGATTATAGAAAAAGCAAGTCATGTTGATTATATTCTTTCATTTTTTTAATAAAATAAAGTAAATTAACATGATCATATTCTAAGTGTCTATTTGTTTGGATTGTATTTTGGTTTAAGCAGAATGTTGCAATAAACCAGCATATTTATAATAATCCCTAGTTTTGCAGGGAAAAGCAGCTTTGTGTTAATAACATTTAGCAAGAATTTTATTGTATATATAGTTAACTTTTGTTAACCTCTACTTTAAATAATAAATAAACACTATACAAATAATCCATAATATTTTAATAACCATATTAAACAAGACTTTTCAAATGTTAATCTATAACTTTGTATATAAGTCACAAAAGGAGCATAATCATTGTTGTCATGGAACTATTTCTAATTTGATACTAGTACTCATGAGTTCACTTCTCAGATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTAATTTCTGGTTCTGTTGATAATTCATGCATCGTATGGGATGTCAACAAAGGTAAAATTAAAGAGGATCTAACTTAAAGAGTTTTTGCTAAGATAAATAAAATTTATACTAACAGTTGGCCAGTTCCTTCATCAGGTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAA</genome_strand>
        <mrna_strand>GAGAGATCAGGAAGCAAC-ATGAAGAATGAAGGGTGGTACAGTTCACATCAATTGGCACGACAGCAAGCCTGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGACATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGGTGATTAATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCATTTAGCCTCTGGTGCAGATG................................................................................GTGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAGGTCCTAAAGACGTTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTGATTTCTGGTTCTGTTGATAATTCGTGCATCATATGGGATGTCAACGAAG....................................................................................GTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAAGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E312321" ref_strand="+" ref_description="SGN-E312321 [cTOA-5-G7]">
      <seq>agagatcaggaagcaacaaataaggatgaagggtggtacagttcagatcaattggcacgacagtaagccagttttgtgccttgattttcaccacctcaccggcgttattgctactggtggcgccgactatgatatcaagatgtgggtgattgattctgaagaaaatgaaaagaaagcgccttcagttacataccaggctagcctttcttaccatagtggtgctgtgaatgctcttcggttctccccttcaggagagcatttggcctctggtgccgatggcggcgagctcatcatttggaagctacattcttcagatgacagcaaaacatggaaagtcctaaagacgttatcatttcaccggaaggatgtattggacttgcagtggtctgctgatggttcttttttaatttctggttctgttgataattcatgcatcgtatgggatgtcaacaaaggttctgttcatcagattttggatgctcatttgcactatgtgcaaggtgtggcatgggatccattgtccaagtatactgcctcactcagttcagatagatcttgccggatttacagcaatagaccatctaaaacaaaaggagttgagaagttgaattttgtgtgtcaacatgtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="107296" stop="111882"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107596" g_stop="107734" g_length="139"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107735" i_stop="109073" i_length="1339">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="109074" g_stop="109185" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="251" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="109186" i_stop="110269" i_length="1084">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110270" g_stop="110296" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="252" r_stop="278" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110297" i_stop="110376" i_length="80">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.882" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110377" g_stop="110449" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="279" r_stop="351" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="110450" i_stop="111220" i_length="771">
            <donor d_prob="0.757" d_score="1.00"/>
            <acceptor a_prob="0.486" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="111221" g_stop="111324" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="352" r_stop="455" r_length="104" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="111325" i_stop="111408" i_length="84">
            <donor d_prob="0.932" d_score="1.00"/>
            <acceptor a_prob="0.230" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="111409" g_stop="111582" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="629" r_length="174" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E312321" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>629</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312321" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107596" e_stop="107734"/>
          <exon e_start="109074" e_stop="109185"/>
          <exon e_start="110270" e_stop="110296"/>
          <exon e_start="110377" e_stop="110449"/>
          <exon e_start="111221" e_stop="111324"/>
          <exon e_start="111409" e_stop="111582"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTACAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGATATCAAGGTTAAAAATTACGATTTTACCCTTTTGAGCCTTGTGTTTCTTAAGTTGGTTTGTCTTATATGCTTCGATTATGCTAATGCTGGATATTGGTTTTAATAATTTTAGTTGGTTAGTCGGATGATATCAACTTTTCATTAATTGATTAATTAATAGTTTGAACTTGGTTTTTGTTTATTGGGTATTGAGATTTTAAGTTGGTGTAAGAATGTTTCAAATTCAAAGGAAATGAAAACACAGTAGAGGGAAATGAAGAGGAAATCTGCATTTTTGTTAGTTAGTTAATAGTTTGAATTTAGTTTTTGTCAACTCGGTAATGCGATTGGAAGATAGTGTAAGAAATTTTGCAGTTCAAAGGAAATGGCAACACAGTAAAAGGGGGAAATGAAGAAGAAAATAGGAAAGAGGGATGTGAAGAAATAACAAAAATTCTAGAAGCGGAAAAGAGGATTTTTTTCTCCATTATGTCCTCGTTTTCTTTGAGCGAATGGGAGGAAATGTGTTTACCATGATTGCATAGATAGCAACAATATGCCGGTACATTTGAATTATTTAGAACAGGGGTGCACATCCCAATTGAATAGTAAAAGACATAGAAAGGGAAAGAGAGGAGCAAAATCTCATTCACTTTCTTAGTATGGTCTCAATTGGCCCAGAAAGGTAACCAAGAGTTGACACTTCAGACACAGGTTTATAATCATCTTCCTTGCAGGACAATATAAATGTTGGGTATGCATATGATTCCATATTCTCAACATGTGATATTCTTACCAATTGAGGATTTGTCATTTCAATGGGTGCCCACATTAGTAGAATTACAGAACTAGGTATGAATTTTAGTGTTTTCTTTACTGGACCAGATTCACCATCCAGTTAACCAAGCAACTAAACTCAGGAGTTTCATGATCCCCTTACCTCTGACCCAAAAAACTCAACTTTATTGATTTAATTCATAATGACTGAGTAGGAGGATGTTTATGCTTGTGATTTGTTTCTCTGCAACCTTGAACTATAAGCCGGTTAGTGATGGTGGCCTAATAGCTAATGCAAACTCTTAAAACCTATCCGGTTCTTCTAACTCAACAGAATAAATCACATTTAATATAGATTGTGTTAGTGTCTGAAATCTTACCATCTACTTGAACTTGTTTACTTCAACTTCAACCTGAAGTAACTCTTGCTTGACGAGTGTGAATTCTTTTGCTTCAGATTGCAAAGTCCTTGCATGTTGACATATTAATCACTGGTCTCAAAGTTTGCTGATATTTTTAAAGGACTTCCATATTATTATTTTATGCTTGGGATGAAATATATAACATCTGGTTCAAAATAAATTCAACAGATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAGGTGAAGTTGTTCATCTTGCTTTATTAAAAGATTCTGGTAGCTAATCACTGAAAGCATTAATTTTACAAAGGCAAGAATTGGTACATTTTTATATCCTGTCGAGTGTTGGAGTTTCATCTGAAGCTGCAGGTTGTTTTGTGCAGTTTATGAATATGGTTGTTTGACTGACTTGGCTTTCTTCTCTCTGTATCTGTATACCTCCCTGAAGAAAAATGTAATATTGGTTTTAGAGAGGGTCAGCGTTGGTAATGTTATTGCTAACTTTACTAAGTTGCAATTAGCTGTACATTTGGTTAAAAAAATTCCGTTTTTTCTTTCAATTTTTACCTTGTTTGAAATAGACTTGTAGGCTTTCATGTTAGTTTCAGTCTTTCAGAAAGCTGATGGCCTGTTAACCAATTTCTTGAAATAATAACGCTGTGAGAAGAATCGTTTCCTGGTGGACTATGTATTGCTTTAAACATTAATATTAGAAAGTTGGAATATCAGTTGTAGATATTCTATTAGCTTGAGTGATTCTCTGGGATTGCTATAGGTTATGAAATTCCTGCAGAATCTTTTTGCTGGATCTGTATTTTTGAGCACTTGTTGATCTGAGAACTAGAGATACAGAGTGGAGTCGGAGCCTCTTTCGTAGTCAGATTTGTTAGATAGTGAGTTGCAATGACATTCACGAAATCATCATTACCTTTGACTATGCAGAGAAGGTTGCTCGTACAGTCTTACTATAAATGAAATAACAGAAGATAACAATGTTTCTCTCAGTATTTGTAGCATTTGATTCAACATGTCTGAAGCACAACTTGATGGAGAATCACGGTGATAGTCTTTTGGGGTTTTTACTTGCTTCTAGGTCTATGCCATCTTACAAGCCTCACTTCTCTGGGTTGATCAATACATTGGAAATGTTAATATGTAACTGTGGTTACTTCATTTTTAGCTACCTTTTCATTTATCAAAACTTCTATTATTACTGAACTTCCAGTGTATGCCTCCATCTGATTTCTTAAACTGTTTGATGTTATACTTGTACCTATCTAGTCAGCCAGCAAACTGAATTATCATTTTTTTTGGTAATATGCAGGAGAGCATTTGGCCTCTGGTGCCGATGGTATAGACTTGTCCCTCTAAATCTCTTAATTTAGTCTGGATCAAATAATTTAACAATATCTACAACTGCTCCTGATGTAGGCGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAAGTCCTAAAGACGTTATCGTAAGCCTTTCATTTGGTCTTATCGCCTTTGTGAATTTCTAAGCACTCATAAAATAGCCGCAATCGCTCCATGGAACATTAGCTACTGCTTTTGTTTTATTCTTATGGAAAGCCAGAGAATTATTAGAACACACTGTTTGGGAATGTCCTGCATTTTTCATTGTGATCTTTATCCTTTTTCTCTTGTTAAATAAATTTTTAAATCTGATGTAGGAAGAAAGGAAAAGTTATAGTTGGCATTTCAGTAGCGGACTTAAGTTAGTGGATGCAGTTGGTGGAAGAGGGTTTTGCTTTCGGGATTATAGGATATTATAACCACATGAAATAGTTGAAGTGTATGATAACACAGCGTTGATTATAGAAAAAGCAAGTCATGTTGATTATATTCTTTCATTTTTTTAATAAAATAAAGTAAATTAACATGATCATATTCTAAGTGTCTATTTGTTTGGATTGTATTTTGGTTTAAGCAGAATGTTGCAATAAACCAGCATATTTATAATAATCCCTAGTTTTGCAGGGAAAAGCAGCTTTGTGTTAATAACATTTAGCAAGAATTTTATTGTATATATAGTTAACTTTTGTTAACCTCTACTTTAAATAATAAATAAACACTATACAAATAATCCATAATATTTTAATAACCATATTAAACAAGACTTTTCAAATGTTAATCTATAACTTTGTATATAAGTCACAAAAGGAGCATAATCATTGTTGTCATGGAACTATTTCTAATTTGATACTAGTACTCATGAGTTCACTTCTCAGATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTAATTTCTGGTTCTGTTGATAATTCATGCATCGTATGGGATGTCAACAAAGGTAAAATTAAAGAGGATCTAACTTAAAGAGTTTTTGCTAAGATAAATAAAATTTATACTAACAGTTGGCCAGTTCCTTCATCAGGTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAATAGACCATCTAAAACAAAAGGAGTTGAGAAGTTGAATTTTGTGTGTCAACATGTCA</genome_strand>
        <mrna_strand>AGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTACAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGATATCAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGAGCATTTGGCCTCTGGTGCCGATG................................................................................GCGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAAGTCCTAAAGACGTTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTAATTTCTGGTTCTGTTGATAATTCATGCATCGTATGGGATGTCAACAAAG....................................................................................GTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAATAGACCATCTAAAACAAAAGGAGTTGAGAAGTTGAATTTTGTGTGTCAACATGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E401638" ref_strand="+" ref_description="SGN-E401638 [PPC-4-H20]">
      <seq>tggcgagctcatcatttggaagctacattcttcagatgacagcaaaacatggaaggtcctaaagacgttatcatttcaccggaaggatgtattggacttgcagtggtctgctgatggttcttttttgatttctggttctgttgataattcgtgcatcatatgggatgtcaacaaaggttctgttcatcagattttggatgctcatttgcactatgtgcaaggtgtggcatgggatccattgtccaagtatactgcctcactcagttcagatagatcttgccggatttacagcaatagaccatctaaaacaaaaggagttgagaagttgaattttgtgtgtcaacatgtcattatgaaggttgaaccacaactgccggatgagtccaagtctactaaaaatcatctctttcttgatgagacattgccatctttcttccgaaggttatcttggtctcctgatggctcctttctgcttgtgcctgcaggttcttacaagtttacacctgcttcagaaccagcgaacactgcttatgtgttttctaggaaagatctcacaaggccagctttaatgctccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="110079" stop="112949"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110378" g_stop="110449" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="72" r_length="72" r_score="0.972"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110450" i_stop="111220" i_length="771">
            <donor d_prob="0.757" d_score="0.98"/>
            <acceptor a_prob="0.486" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111221" g_stop="111324" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="73" r_stop="176" r_length="104" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111325" i_stop="111408" i_length="84">
            <donor d_prob="0.932" d_score="0.94"/>
            <acceptor a_prob="0.230" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111409" g_stop="111620" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="177" r_stop="388" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="111621" i_stop="111708" i_length="88">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.733" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="111709" g_stop="111805" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="389" r_stop="485" r_length="97" r_score="0.979"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="111806" i_stop="112560" i_length="755">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.946" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="112561" g_stop="112633" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="558" r_length="73" r_score="0.945"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="112634" i_stop="112749" i_length="116">
            <donor d_prob="0.145" d_score="0.94"/>
            <acceptor a_prob="0.748" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="112750" g_stop="112767" g_length="18"/>
          <reference_exon_boundary r_type="cDNA" r_start="559" r_stop="576" r_length="18" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E401638" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>576</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E401638" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110378" e_stop="110449"/>
          <exon e_start="111221" e_stop="111324"/>
          <exon e_start="111409" e_stop="111620"/>
          <exon e_start="111709" e_stop="111805"/>
          <exon e_start="112561" e_stop="112633"/>
          <exon e_start="112750" e_stop="112767"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAAGTCCTAAAGACGTTATCGTAAGCCTTTCATTTGGTCTTATCGCCTTTGTGAATTTCTAAGCACTCATAAAATAGCCGCAATCGCTCCATGGAACATTAGCTACTGCTTTTGTTTTATTCTTATGGAAAGCCAGAGAATTATTAGAACACACTGTTTGGGAATGTCCTGCATTTTTCATTGTGATCTTTATCCTTTTTCTCTTGTTAAATAAATTTTTAAATCTGATGTAGGAAGAAAGGAAAAGTTATAGTTGGCATTTCAGTAGCGGACTTAAGTTAGTGGATGCAGTTGGTGGAAGAGGGTTTTGCTTTCGGGATTATAGGATATTATAACCACATGAAATAGTTGAAGTGTATGATAACACAGCGTTGATTATAGAAAAAGCAAGTCATGTTGATTATATTCTTTCATTTTTTTAATAAAATAAAGTAAATTAACATGATCATATTCTAAGTGTCTATTTGTTTGGATTGTATTTTGGTTTAAGCAGAATGTTGCAATAAACCAGCATATTTATAATAATCCCTAGTTTTGCAGGGAAAAGCAGCTTTGTGTTAATAACATTTAGCAAGAATTTTATTGTATATATAGTTAACTTTTGTTAACCTCTACTTTAAATAATAAATAAACACTATACAAATAATCCATAATATTTTAATAACCATATTAAACAAGACTTTTCAAATGTTAATCTATAACTTTGTATATAAGTCACAAAAGGAGCATAATCATTGTTGTCATGGAACTATTTCTAATTTGATACTAGTACTCATGAGTTCACTTCTCAGATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTAATTTCTGGTTCTGTTGATAATTCATGCATCGTATGGGATGTCAACAAAGGTAAAATTAAAGAGGATCTAACTTAAAGAGTTTTTGCTAAGATAAATAAAATTTATACTAACAGTTGGCCAGTTCCTTCATCAGGTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAATAGACCATCTAAAACAAAAGGAGTTGAGAAGTTGAATTTTGTGTGTCAACATGTCATTATGAAGGTTGAACCACAACTGCCGGATGAGTCCAAGGTCAAATATCATATCAGTTTCTCAATGTCTTCTATTTACAAGTGAATGTTAAATGCATAATAACTTTGGCGCTTCCAAATTCATGCAGTCTACTAAAAATCATCTCTTTCTTGATGAGACACTGCCATCTTTCTTCCGAAGGTTATCTTGGTCTCCTGATGGTTCCTTTCTGCTTGTGCCTGCAGGTACAACCTTGAAACTAAAAGTCCTAATTATGAGTCTGTGCATTTTGATTATTCTTTCTACCCGTGTCGGAATGTTCTCCTGCTACCTCCTGCACCCCCACCATTCCGAAAGAAAAAGACGAAGAAAACCATTCTCAAAGACAAAAAGAAAAGGAAAGCTCTATCAAGACTTCATGTGTTCTTTGCCTTAAAACATACCTCTTTGTTCTTGCAGTGACATGACATTGGTGTCAGTTCAGTCACCCTGTGAAATATCATCAACAGTTTAATTTTTCATTGAAGGAGTATTACGATATTTCTCTACTTTCTGAATAAGCCTATTGAAGCATCGGGACCTTCTTTTGCAGTCCAAATATAAAAGTAGTGCACGAAAATTTTCAGATTAAAATCATACCATAGCCCACTTTGTGAACTGTGTCTTGACATTTTGCAGCATCAGGTTAATTTCCACGACACCTGTTTTATAGTTCTCATTTAAGCTTTATCTTTGGACTCTCCATTTGCTTTTTTGGCAATTTACTGTTTTTGAAATGTTGAATTGTACTTGAGATAGAACTTCCAGAGAGAAACTTGAACTTCTTCATATTCTTCATGTGATAGTGCTAATGCGATAGATTATAGGCATCTGACCTGTATTCCTTTTTTTTTGTTTATTATTATTTTTATAATTATCATTTTTGAGGTAATGGGGAAAAAGGGAACTGGTAAAGTAAAGGTAGAAGGTTTGAGAATATAGACGTGTTTTGCTATTTCAGGTTGTTACAAGTTTACACCTGCTTCAGAACCAGCAAACACTGCTTATGTGTTTTCTAGGAATGATCTTACAAGGCAAGAATCTTATGTCTTTTTCGTACTGCTATATTTTTATTAAAGCGAATCCATTATATTCCCTCTAGCTCACAACAATCTGATACTTGCGCATCAACTTTGTTGGATTTTGACAGGCCAGCTTTAATGCTCCC</genome_strand>
        <mrna_strand>TGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAGGTCCTAAAGACGTTATC...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTGATTTCTGGTTCTGTTGATAATTCGTGCATCATATGGGATGTCAACAAAG....................................................................................GTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAATAGACCATCTAAAACAAAAGGAGTTGAGAAGTTGAATTTTGTGTGTCAACATGTCATTATGAAGGTTGAACCACAACTGCCGGATGAGTCCAAG........................................................................................TCTACTAAAAATCATCTCTTTCTTGATGAGACATTGCCATCTTTCTTCCGAAGGTTATCTTGGTCTCCTGATGGCTCCTTTCTGCTTGTGCCTGCAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTACAAGTTTACACCTGCTTCAGAACCAGCGAACACTGCTTATGTGTTTTCTAGGAAAGATCTCACAAG....................................................................................................................GCCAGCTTTAATGCTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E435282" ref_strand="+" ref_description="SGN-E435282 [STM-61-E10]">
      <seq>gggaagtgtatatgaagtaaatgggaataagatcacaaaattaattcgctttctgggagtgaggtttagttccttcaatttcactgtcgaattttatcgatctgtattccttgtccaacacacttggtcttccaaatatggaataaagagagttagatcaacccttacgttggacaagcttgatgatatcagcgatgagtggatcaatgcagacgtccttatattcaattctggacagtggtgggtacctgggaagctttttggagtggggtgctatttccaagtaaatagtacactgaggattggaatgtcaattcagacggcattcagaactgcccttgagacttggtcatcctggattgataccaaaattaaccctaacaggacgcgtgtttttttcagaacgtttgaaccttctcattggagcaatttaactcagcggatgtgcaatgtgacaaatcaacctctttcagagactaatggtcaggagagtagctcattttctgatgctgtactagaggtggcacaccgcatgaaagttccagttaatgtgctacacataactcccatgtccgcgtacaggaaagatgcacatgttgggtctttggagtgataatccatctctatctgattgcagccactggtgtctacctggacttcctgatcttttgaatgaaatggtcttttcatacctgcatgatagctatcaacatacgtcattgtatcaacaaagagaacttaatagnctggactgatgatgtatca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="117008" stop="113848"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116708" g_stop="116442" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116441" i_stop="115568" i_length="874">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115567" g_stop="115409" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="426" r_length="159" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115408" i_stop="114723" i_length="686">
            <donor d_prob="0.698" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114722" g_stop="114414" g_length="309"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="736" r_length="310" r_score="0.968"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="114413" i_stop="114178" i_length="236">
            <donor d_prob="0.967" d_score="0.98"/>
            <acceptor a_prob="0.997" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="114177" g_stop="114148" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="737" r_stop="765" r_length="29" r_score="0.867"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E435282" ref_strand="+">
        <total_alignment_score>0.978</total_alignment_score>
        <cumulative_length_of_scored_exons>765</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E435282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116708" e_stop="116442"/>
          <exon e_start="115567" e_stop="115409"/>
          <exon e_start="114722" e_stop="114414"/>
          <exon e_start="114177" e_stop="114148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGTGTATATGAAGTAAATGGGAATAAGATCACAAAATTAATTCGATTTCTGGGAGTGAGGTTTAGTTCCTTCAATTTCACTGTCGAATTTTATCGATCTGTATTCCTTGTCCAACATACTTGGTCTTCCAAATATGGAATAAAGAGAGTTAGATCAACCCTTACGTTAGACAAGCTTGATGATATCAGCGATGAGTGGATCAATGCAGACGTCCTCATATTCAATTCTGGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGTGTAAGTGCACTTTGTTCTTTTACTAATACAAGTTTTATTACTTCGCGACTATATATGCATAATAGCAAACTGTAGTTACCTTCATATACTGCAAAACTGTCATTGAGCTAAACGAACAATAACAACATCACAATTTTTGCAGTATTTGAAGGGCCTTCATGTATGGACTCCCCCTTTTAATCGTCATTCCCCTTTCCTCCTTTTTCACTTGTATCCGCCCTTGTTTAGCATGTGCGAGTATCCCTGTGTGTTCCACAAGAATTTGGTTGAAGTCTCAATAGGACAGGTGTTAAAGCCACTTGGAATTGGAATTGCTCGTTCCATTGTGAGGACACATAATGCTGACCCCAACTAGCTTGGATTAAAGGGTAATTAGTAGAATTTTTTGTTCCCATAGTGAAAGAGTTCATTTTAGGAGGTCCCTCGTGCATGAACGCATTGCTTCTATTTAGTTTCATTAGTTACCTCAAATCATTTGTTTAGGGCCTTCAAAGGTTATTAGCCACTCTCTATATGAATATGCAAAAAACAGGAAGGTCTGAGGATAACGTTTGAAGCCCAAACATTTAAACTTTCCGGGAATCTTGTGTTCATTTTTGTACATCTACCACATTTTAAATCAAAAGCTAGCTCACACATATCAATCCCCTTAAGGTAGAAATGTCTCCGTATTTTTCATTTCTTTCATGGTGTGAATTTTAGCATTTCTGTCAGTAGGTTTTATAAACTCTTAGGTTCTAAATAGTAAGCAAGATCAAGGAAACGTTTATGCGCTCGATAAAGCACCTAGTGTTTCCTTCTTAGTAATCATGCAGAAGCTGGTATGTTGTGTTTCAGTTGTTCTCATGATGCTTCTTAATCTTTCTTTGAATAGGGGGTGCTATTTCCAAGTAAATAGTACACTGAGGATTGGAATGTCAATTCAGACGGCATTCAGAACTGCCCTTGAGACTTGGTCATCCTGGATTGATACCAAAATTAACCGTAACAGGACGCGTGTTTTTTTCAGAACGTTTGAACCTTCTCATTGGAGGTACTTGTTGATAGCTATGCCTTCTATACAGATGAATGCTTTTGGATCTCTCAGTAGAAAGTTTCTACAAATTGGAGCTGGTAATAATTGGATGGACCTTTTGAACATTTCTTTTGATATTTCAAGATTCAAAGCAATTCTTTTAAAAAGTCGAAAATTTGTTTGAGTGTCTCCAGCAAAAGGAAAATGCTGCAAGAGAAATACATCCAGATCTCAAAGTAACTAATGTCTTAGCACAACTTTAAAAAGATCATAACTAATCTCAAACAACGTCAAAGTTTTTAATTGAATCTTGTGAATTTGATTGATGTTCGAAAAGTTATGATGTTGATTTCTGCCAGTTCCAATTTTATGGAAAATATTCAATAGGACACCACGTTTGGCTTCTCCAGCTTTATATATAACACAAAATTTGACTCAACTAGGTAGGGATAAGGTTTGCGCACATTCTACCCTCCCCAAACCACACTTGTGGGACTACGCTAAGTATGTTATTGCTGTTGATATAGTATGTTAGATATTTTATCAATAACAACAACATACCTGGTTTAATTCCACTGTGGGGTCTGGGGAGGGTTGGATGTACGCAAACCTTACCCCTACCTTTGTGGGGTAGAGAGGTTGTTTCCGATAGACCTAACATACTATATCATTGCAACTAATGTATACATATTGGTTTTTATCAGCAATTTAACTCAGCGGATGTGCAATGTGACAAATCAACCTCTTTCAGAGACTAATGGTCAGGAGAATAGCTCATTTTCTGATGCTGTACTAGAAGTGGCACACAGCATGAAAGTTCCAGTTAATGTGCTACACATAACTCCCATGTCCGCGTTCAGGAAAGATGCACATGTT-GGTCTTTGGAGTGATAATCCATCTCTGTCTGATTGCAGCCACTGGTGTCTACCTGGACTTCCTGATCTTTGGAATGAAATGGTCTTCTCGTACCTGCATGATAGCTATCAACATACGTCATTGTATCAACAAAGAGAGTAAGTTTTGATACTTGTGCTTAACATTGGTCAAGTCAATAGTATTTCTTCTTCTTCTTCCCTGTGTGATGTGTTATGGCTATCCATATTCGCCTCTAGTTAAGCACGAAGAAATGTTGCATAGCCTCGTAGAAATTTGCTTCACTTAGCTCCAAGATCTACATTATAATATTATGATACAAAATGCTTTATATATCCAGATATCCTATTTAGTGAAGTCAATATGTTTGTTGCAGATTTAATTAGCTTGGACTGATGATGTATCA</genome_strand>
        <mrna_strand>GGGAAGTGTATATGAAGTAAATGGGAATAAGATCACAAAATTAATTCGCTTTCTGGGAGTGAGGTTTAGTTCCTTCAATTTCACTGTCGAATTTTATCGATCTGTATTCCTTGTCCAACACACTTGGTCTTCCAAATATGGAATAAAGAGAGTTAGATCAACCCTTACGTTGGACAAGCTTGATGATATCAGCGATGAGTGGATCAATGCAGACGTCCTTATATTCAATTCTGGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGTGCTATTTCCAAGTAAATAGTACACTGAGGATTGGAATGTCAATTCAGACGGCATTCAGAACTGCCCTTGAGACTTGGTCATCCTGGATTGATACCAAAATTAACCCTAACAGGACGCGTGTTTTTTTCAGAACGTTTGAACCTTCTCATTGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTAACTCAGCGGATGTGCAATGTGACAAATCAACCTCTTTCAGAGACTAATGGTCAGGAGAGTAGCTCATTTTCTGATGCTGTACTAGAGGTGGCACACCGCATGAAAGTTCCAGTTAATGTGCTACACATAACTCCCATGTCCGCGTACAGGAAAGATGCACATGTTGGGTCTTTGGAGTGATAATCCATCTCTATCTGATTGCAGCCACTGGTGTCTACCTGGACTTCCTGATCTTTTGAATGAAATGGTCTTTTCATACCTGCATGATAGCTATCAACATACGTCATTGTATCAACAAAGAGA............................................................................................................................................................................................................................................ACTTAA-TAGNCTGGACTGATGATGTATCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E465541" ref_strand="+" ref_description="SGN-E465541 [cPRO-21-M22]">
      <seq>gggaagtgtatatgaagtaaatgggaataagatcacaaaattaattcgctttctgggagtgaggtttagttccttcaatttcactgtcgaattttatcgatctgtattccttgtccaacacacttggtcttccaaatatggaataaagagagttagatcaacccttacgttggacaagcttgatgatatcagcgatgagtggatcaatgcagacgtccttatattcaattctggacagtggtgggtacctgggaagctttttggagtggggtgctatttccaagtaaatagtacactgaggattggaatgtcaattcagacggcattcagaactgcccttgagacttggtcatcctggattgataccaaaattaaccctaacaggacgcgtgtttttttcagaacgtttgaaccttctcattggagcaatttaactcagcggatgtgcaatgtgacaaatcaacctctttcagagactaatggtcaggagagtagctcattttctgatgctgtactagaggtggcacaccgcatgaaagttccagttaatgtgctacacataactcccatgtccgcgtacaggaaagatgcacatgttgggctttggagtgataatccatctctatctgattgcagccactggtgtctacctggacttcctgatctttggaatgaaatggtcttttcatacctgcatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="117008" stop="114151"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116708" g_stop="116442" g_length="267"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="267" r_length="267" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116441" i_stop="115568" i_length="874">
            <donor d_prob="0.978" d_score="0.98"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115567" g_stop="115409" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="426" r_length="159" r_score="0.994"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115408" i_stop="114723" i_length="686">
            <donor d_prob="0.698" d_score="0.98"/>
            <acceptor a_prob="0.976" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114722" g_stop="114451" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="427" r_stop="698" r_length="272" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E465541" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>698</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465541" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116708" e_stop="116442"/>
          <exon e_start="115567" e_stop="115409"/>
          <exon e_start="114722" e_stop="114451"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAAGTGTATATGAAGTAAATGGGAATAAGATCACAAAATTAATTCGATTTCTGGGAGTGAGGTTTAGTTCCTTCAATTTCACTGTCGAATTTTATCGATCTGTATTCCTTGTCCAACATACTTGGTCTTCCAAATATGGAATAAAGAGAGTTAGATCAACCCTTACGTTAGACAAGCTTGATGATATCAGCGATGAGTGGATCAATGCAGACGTCCTCATATTCAATTCTGGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGTGTAAGTGCACTTTGTTCTTTTACTAATACAAGTTTTATTACTTCGCGACTATATATGCATAATAGCAAACTGTAGTTACCTTCATATACTGCAAAACTGTCATTGAGCTAAACGAACAATAACAACATCACAATTTTTGCAGTATTTGAAGGGCCTTCATGTATGGACTCCCCCTTTTAATCGTCATTCCCCTTTCCTCCTTTTTCACTTGTATCCGCCCTTGTTTAGCATGTGCGAGTATCCCTGTGTGTTCCACAAGAATTTGGTTGAAGTCTCAATAGGACAGGTGTTAAAGCCACTTGGAATTGGAATTGCTCGTTCCATTGTGAGGACACATAATGCTGACCCCAACTAGCTTGGATTAAAGGGTAATTAGTAGAATTTTTTGTTCCCATAGTGAAAGAGTTCATTTTAGGAGGTCCCTCGTGCATGAACGCATTGCTTCTATTTAGTTTCATTAGTTACCTCAAATCATTTGTTTAGGGCCTTCAAAGGTTATTAGCCACTCTCTATATGAATATGCAAAAAACAGGAAGGTCTGAGGATAACGTTTGAAGCCCAAACATTTAAACTTTCCGGGAATCTTGTGTTCATTTTTGTACATCTACCACATTTTAAATCAAAAGCTAGCTCACACATATCAATCCCCTTAAGGTAGAAATGTCTCCGTATTTTTCATTTCTTTCATGGTGTGAATTTTAGCATTTCTGTCAGTAGGTTTTATAAACTCTTAGGTTCTAAATAGTAAGCAAGATCAAGGAAACGTTTATGCGCTCGATAAAGCACCTAGTGTTTCCTTCTTAGTAATCATGCAGAAGCTGGTATGTTGTGTTTCAGTTGTTCTCATGATGCTTCTTAATCTTTCTTTGAATAGGGGGTGCTATTTCCAAGTAAATAGTACACTGAGGATTGGAATGTCAATTCAGACGGCATTCAGAACTGCCCTTGAGACTTGGTCATCCTGGATTGATACCAAAATTAACCGTAACAGGACGCGTGTTTTTTTCAGAACGTTTGAACCTTCTCATTGGAGGTACTTGTTGATAGCTATGCCTTCTATACAGATGAATGCTTTTGGATCTCTCAGTAGAAAGTTTCTACAAATTGGAGCTGGTAATAATTGGATGGACCTTTTGAACATTTCTTTTGATATTTCAAGATTCAAAGCAATTCTTTTAAAAAGTCGAAAATTTGTTTGAGTGTCTCCAGCAAAAGGAAAATGCTGCAAGAGAAATACATCCAGATCTCAAAGTAACTAATGTCTTAGCACAACTTTAAAAAGATCATAACTAATCTCAAACAACGTCAAAGTTTTTAATTGAATCTTGTGAATTTGATTGATGTTCGAAAAGTTATGATGTTGATTTCTGCCAGTTCCAATTTTATGGAAAATATTCAATAGGACACCACGTTTGGCTTCTCCAGCTTTATATATAACACAAAATTTGACTCAACTAGGTAGGGATAAGGTTTGCGCACATTCTACCCTCCCCAAACCACACTTGTGGGACTACGCTAAGTATGTTATTGCTGTTGATATAGTATGTTAGATATTTTATCAATAACAACAACATACCTGGTTTAATTCCACTGTGGGGTCTGGGGAGGGTTGGATGTACGCAAACCTTACCCCTACCTTTGTGGGGTAGAGAGGTTGTTTCCGATAGACCTAACATACTATATCATTGCAACTAATGTATACATATTGGTTTTTATCAGCAATTTAACTCAGCGGATGTGCAATGTGACAAATCAACCTCTTTCAGAGACTAATGGTCAGGAGAATAGCTCATTTTCTGATGCTGTACTAGAAGTGGCACACAGCATGAAAGTTCCAGTTAATGTGCTACACATAACTCCCATGTCCGCGTTCAGGAAAGATGCACATGTTGGTCTTTGGAGTGATAATCCATCTCTGTCTGATTGCAGCCACTGGTGTCTACCTGGACTTCCTGATCTTTGGAATGAAATGGTCTTCTCGTACCTGCATG</genome_strand>
        <mrna_strand>GGGAAGTGTATATGAAGTAAATGGGAATAAGATCACAAAATTAATTCGCTTTCTGGGAGTGAGGTTTAGTTCCTTCAATTTCACTGTCGAATTTTATCGATCTGTATTCCTTGTCCAACACACTTGGTCTTCCAAATATGGAATAAAGAGAGTTAGATCAACCCTTACGTTGGACAAGCTTGATGATATCAGCGATGAGTGGATCAATGCAGACGTCCTTATATTCAATTCTGGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGTGCTATTTCCAAGTAAATAGTACACTGAGGATTGGAATGTCAATTCAGACGGCATTCAGAACTGCCCTTGAGACTTGGTCATCCTGGATTGATACCAAAATTAACCCTAACAGGACGCGTGTTTTTTTCAGAACGTTTGAACCTTCTCATTGGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTAACTCAGCGGATGTGCAATGTGACAAATCAACCTCTTTCAGAGACTAATGGTCAGGAGAGTAGCTCATTTTCTGATGCTGTACTAGAGGTGGCACACCGCATGAAAGTTCCAGTTAATGTGCTACACATAACTCCCATGTCCGCGTACAGGAAAGATGCACATGTTGGGCTTTGGAGTGATAATCCATCTCTATCTGATTGCAGCCACTGGTGTCTACCTGGACTTCCTGATCTTTGGAATGAAATGGTCTTTTCATACCTGCATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E604090" ref_strand="+" ref_description="SGN-E604090 [67281]">
      <seq>ttaggactcaatgggagtctttgatatgccttctaatgacagggtgcaagataaaggaagtgtatatgaagtaaatgggaataagatcacaaaattaattcgctttctgggagtgaggtttagttccttcaatttcaccgtcgaattttatcgatctgtattccttgtccaacatacttggtcttccaaatatggaataaagagagttagatcaacccttacgttggacaagcttgatgatatcagcgatgagtggatcaatgcagacgtcctcatattcaattctgggacagtggtgggtacctgggaagcttttggagtggggtgctatttccaagtaaatagtacgctgaggattggaatgtcaattcagacggcattcagaactgcccttgagacttggtcatcctggattgataccaaaattaaccctaacaggacgcgtgtttttttcagaacgtttgaaccttctcattgggaggtacttgttgatagctatgccttctatacagatgaatgcttttgggatctctcagtagaaaagtttctacaaattggagctgcaattttaactcaggcggaatgtgcaatggtgacaaattcaactcttttcagagactaatgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="117062" stop="114366"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="116763" g_stop="116442" g_length="322"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="321" r_length="321" r_score="0.969"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="116441" i_stop="115568" i_length="874">
            <donor d_prob="0.978" d_score="0.94"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115567" g_stop="115329" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="322" r_stop="563" r_length="242" r_score="0.967"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115328" i_stop="114723" i_length="606">
            <donor d_prob="0.886" d_score="0.92"/>
            <acceptor a_prob="0.976" a_score="0.71"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="114722" g_stop="114666" g_length="57"/>
          <reference_exon_boundary r_type="cDNA" r_start="564" r_stop="625" r_length="62" r_score="0.772"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E604090" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E604090" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="116763" e_stop="116442"/>
          <exon e_start="115567" e_stop="115329"/>
          <exon e_start="114722" e_stop="114666"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAGGACTCAATGGGAGTCTTTGATATGCCTTCTAATGACAGGGGTGCAAGATAAGAGAAGTGTATATGAAGTAAATGGGAATAAGATCACAAAATTAATTCGATTTCTGGGAGTGAGGTTTAGTTCCTTCAATTTCACTGTCGAATTTTATCGATCTGTATTCCTTGTCCAACATACTTGGTCTTCCAAATATGGAATAAAGAGAGTTAGATCAACCCTTACGTTAGACAAGCTTGATGATATCAGCGATGAGTGGATCAATGCAGACGTCCTCATATTCAATTCT-GGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGTGTAAGTGCACTTTGTTCTTTTACTAATACAAGTTTTATTACTTCGCGACTATATATGCATAATAGCAAACTGTAGTTACCTTCATATACTGCAAAACTGTCATTGAGCTAAACGAACAATAACAACATCACAATTTTTGCAGTATTTGAAGGGCCTTCATGTATGGACTCCCCCTTTTAATCGTCATTCCCCTTTCCTCCTTTTTCACTTGTATCCGCCCTTGTTTAGCATGTGCGAGTATCCCTGTGTGTTCCACAAGAATTTGGTTGAAGTCTCAATAGGACAGGTGTTAAAGCCACTTGGAATTGGAATTGCTCGTTCCATTGTGAGGACACATAATGCTGACCCCAACTAGCTTGGATTAAAGGGTAATTAGTAGAATTTTTTGTTCCCATAGTGAAAGAGTTCATTTTAGGAGGTCCCTCGTGCATGAACGCATTGCTTCTATTTAGTTTCATTAGTTACCTCAAATCATTTGTTTAGGGCCTTCAAAGGTTATTAGCCACTCTCTATATGAATATGCAAAAAACAGGAAGGTCTGAGGATAACGTTTGAAGCCCAAACATTTAAACTTTCCGGGAATCTTGTGTTCATTTTTGTACATCTACCACATTTTAAATCAAAAGCTAGCTCACACATATCAATCCCCTTAAGGTAGAAATGTCTCCGTATTTTTCATTTCTTTCATGGTGTGAATTTTAGCATTTCTGTCAGTAGGTTTTATAAACTCTTAGGTTCTAAATAGTAAGCAAGATCAAGGAAACGTTTATGCGCTCGATAAAGCACCTAGTGTTTCCTTCTTAGTAATCATGCAGAAGCTGGTATGTTGTGTTTCAGTTGTTCTCATGATGCTTCTTAATCTTTCTTTGAATAGGGGGTGCTATTTCCAAGTAAATAGTACACTGAGGATTGGAATGTCAATTCAGACGGCATTCAGAACTGCCCTTGAGACTTGGTCATCCTGGATTGATACCAAAATTAACCGTAACAGGACGCGTGTTTTTTTCAGAACGTTTGAACCTTCTCATT-GGAGGTACTTGTTGATAGCTATGCCTTCTATACAGATGAATGCTTTT-GGATCTCTCAGTAG-AAAGTTTCTACAAATTGGAGCTGGTAATAATTGGATGGACCTTTTGAACATTTCTTTTGATATTTCAAGATTCAAAGCAATTCTTTTAAAAAGTCGAAAATTTGTTTGAGTGTCTCCAGCAAAAGGAAAATGCTGCAAGAGAAATACATCCAGATCTCAAAGTAACTAATGTCTTAGCACAACTTTAAAAAGATCATAACTAATCTCAAACAACGTCAAAGTTTTTAATTGAATCTTGTGAATTTGATTGATGTTCGAAAAGTTATGATGTTGATTTCTGCCAGTTCCAATTTTATGGAAAATATTCAATAGGACACCACGTTTGGCTTCTCCAGCTTTATATATAACACAAAATTTGACTCAACTAGGTAGGGATAAGGTTTGCGCACATTCTACCCTCCCCAAACCACACTTGTGGGACTACGCTAAGTATGTTATTGCTGTTGATATAGTATGTTAGATATTTTATCAATAACAACAACATACCTGGTTTAATTCCACTGTGGGGTCTGGGGAGGGTTGGATGTACGCAAACCTTACCCCTACCTTTGTGGGGTAGAGAGGTTGTTTCCGATAGACCTAACATACTATATCATTGCAACTAATGTATACATATTGGTTTTTATCAGCAA-TTTAACTCA-GCGG-ATGTGCAAT-GTGACAAA-TCAACCTCTTTCAGAGACTAATGG</genome_strand>
        <mrna_strand>TTAGGACTCAATGGGAGTCTTTGATATGCCTTCTAATGACA-GGGTGCAAGATAAAGGAAGTGTATATGAAGTAAATGGGAATAAGATCACAAAATTAATTCGCTTTCTGGGAGTGAGGTTTAGTTCCTTCAATTTCACCGTCGAATTTTATCGATCTGTATTCCTTGTCCAACATACTTGGTCTTCCAAATATGGAATAAAGAGAGTTAGATCAACCCTTACGTTGGACAAGCTTGATGATATCAGCGATGAGTGGATCAATGCAGACGTCCTCATATTCAATTCTGGGACAGTGGTGGGTACCTGGGAAGC-TTTTGGAGT..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGGTGCTATTTCCAAGTAAATAGTACGCTGAGGATTGGAATGTCAATTCAGACGGCATTCAGAACTGCCCTTGAGACTTGGTCATCCTGGATTGATACCAAAATTAACCCTAACAGGACGCGTGTTTTTTTCAGAACGTTTGAACCTTCTCATTGGGAGGTACTTGTTGATAGCTATGCCTTCTATACAGATGAATGCTTTTGGGATCTCTCAGTAGAAAAGTTTCTACAAATTGGAGCTG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATTTTAACTCAGGCGGAATGTGCAATGGTGACAAATTCAACTCTTTTCAGAGACTAATGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E310356" ref_strand="+" ref_description="SGN-E310356 [cTOA-1-G14]">
      <seq>ctatttggcctagttttcctcttcaaaaccctcaacaccatcaccttccctcctcctcaacccaacaacaacaacaacaacaagaagaagtagtagttgtcccttttgatcatgtgttaaacaaccatgttcaaaccctaatagaggatcaagaacacgatgatcaagacgaagatgaagaggaagaagaagagctaggagccatgaaagaaatgatgttcaaaattgcatctatgcaaccagtagacattgatccatccactatacgaaaacctaaaaggcgtaacgtacgtataagcaatgatccacaaagcgtagcagccaggctacgccgcgaaaggataagtgaaaaaatcagaatcttgcaaagattagtccctggtggaacaaaaatggacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="123708" stop="122708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="123408" g_stop="123008" g_length="401"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="401" r_length="401" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E310356" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>401</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310356" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="123408" e_stop="123008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATTTGGCCTAGTTTTCCTCTTCAAAACCCTCAACACCATCACCTTCCCTCCTCCTCAACCCAACAACAACAACAACAACAAGAAGAAGTAGTAGTTGTCCCTTTTGATCATGTGTTAAACAACCATGTTCAAACCCTAATAGAGGATCAAGAACACGATGATCAAGACGAAGATGAAGAGGAAGAAGAAGAGCTAGGAGCCATGAAAGAAATGATGTTCAAAATTGCATCTATGCAACCAGTAGACATTGATCCATCCACTATACGAAAACCTAAAAGGCGTAACGTACGTATAAGCAATGATCCACAAAGCGTAGCAGCCAGGCTACGCCGCGAAAGGATAAGTGAAAAAATCAGAATCTTGCAAAGATTAGTCCCTGGTGGAACAAAAATGGACACT</genome_strand>
        <mrna_strand>CTATTTGGCCTAGTTTTCCTCTTCAAAACCCTCAACACCATCACCTTCCCTCCTCCTCAACCCAACAACAACAACAACAACAAGAAGAAGTAGTAGTTGTCCCTTTTGATCATGTGTTAAACAACCATGTTCAAACCCTAATAGAGGATCAAGAACACGATGATCAAGACGAAGATGAAGAGGAAGAAGAAGAGCTAGGAGCCATGAAAGAAATGATGTTCAAAATTGCATCTATGCAACCAGTAGACATTGATCCATCCACTATACGAAAACCTAAAAGGCGTAACGTACGTATAAGCAATGATCCACAAAGCGTAGCAGCCAGGCTACGCCGCGAAAGGATAAGTGAAAAAATCAGAATCTTGCAAAGATTAGTCCCTGGTGGAACAAAAATGGACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E317306" ref_strand="+" ref_description="SGN-E317306 [cTOA-28-J24]">
      <seq>tattccgaaaatttaagcttctgttcatttccatggcttcctttttcacactcactatcttctccttaatcctcttcttctctatttcctccgccgctcgccaccattcctccacatccccgtcaatttcacttcagatccgtggtgcttgtaaggcttcacgggacccaccaacatgtgaatctgtattgacggattccggttacttaccgtctgagctaacgacgtcgttgatcatccaatcggctgttaaagtatcatcgaagaacaacgataaggcgaaagagatggtgcaggcaattatagatgcgtcgacagggaataatcagaaccgtacggacgctgggaaagtgtgtatggaggtgctcgggtatgcggagtatcgggtcgggttaacgggtcaggcagtgattaacggcggatacaagagcgctcgtgcatggatgagctccgttatggtgtatcaatacgactgctggtccgctttgaagtacgttaatggcacctcccaggtatctaaaacgatgtcgtttatcaattccttgatcggatacagcagcaatgcattggggatgatggtgaatttcgacctttacggtgctgataccgggtcatggaccgtacccaaaacagaacgagacgggttctgggaaggttcgggttcgggttcaagcgggtcgggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="153485" stop="154767"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="153785" g_stop="154467" g_length="683"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="683" r_length="683" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E317306" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E317306" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="153785" e_stop="154467"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATTCCGAAAATTTAAGCTTCTGTTCATTTCCATGGCTTCCTTTTTCACACTCACTATCTTCTCCTTAATCCTCTTCTTCTCTATTTCCTCCGCCGCTCGCCACCATTCCTCCACATCCCCGTCAATTTCACTTCAGATCCGTGGTGCTTGTAAGGCTTCACGGGACCCACCAACATGTGAATCTGTATTGACGGATTCCGGTTACTTACCGTCTGAGCTAACGACGTCGTTGATCATCCAATCGGCTGTTAAAGTATCATCGAAGAACAACGATAAGGCGAAAGAGATGGTGCAGGCAATTATAGATGCGTCGACAGGGAATAATCAGAACCGTACGGACGCTGGGAAAGTGTGTATGGAGGTGCTCGGGTATGCGGAGTATCGGGTCGGGTTAACGGGTCAGGCAGTGATTAACGGCGGATACAAGAGCGCTCGTGCATGGATGAGCTCCGTTATGGTGTATCAATACGACTGCTGGTCCGCTTTGAAGTACGTTAATGGCACCTCCCAGGTATCTAAAACGATGTCGTTTATCAATTCCTTGATCGGATACAGCAGCAATGCATTGGGGATGATGGTGAATTTCGACCTTTACGGTGCTGATACCGGGTCATGGACCGTACCCAAAACAGAACGAGACGGGTTCTGGGAAGGTTCGGGTTCGGGTTCAAGCGGGTCGGGT</genome_strand>
        <mrna_strand>TATTCCGAAAATTTAAGCTTCTGTTCATTTCCATGGCTTCCTTTTTCACACTCACTATCTTCTCCTTAATCCTCTTCTTCTCTATTTCCTCCGCCGCTCGCCACCATTCCTCCACATCCCCGTCAATTTCACTTCAGATCCGTGGTGCTTGTAAGGCTTCACGGGACCCACCAACATGTGAATCTGTATTGACGGATTCCGGTTACTTACCGTCTGAGCTAACGACGTCGTTGATCATCCAATCGGCTGTTAAAGTATCATCGAAGAACAACGATAAGGCGAAAGAGATGGTGCAGGCAATTATAGATGCGTCGACAGGGAATAATCAGAACCGTACGGACGCTGGGAAAGTGTGTATGGAGGTGCTCGGGTATGCGGAGTATCGGGTCGGGTTAACGGGTCAGGCAGTGATTAACGGCGGATACAAGAGCGCTCGTGCATGGATGAGCTCCGTTATGGTGTATCAATACGACTGCTGGTCCGCTTTGAAGTACGTTAATGGCACCTCCCAGGTATCTAAAACGATGTCGTTTATCAATTCCTTGATCGGATACAGCAGCAATGCATTGGGGATGATGGTGAATTTCGACCTTTACGGTGCTGATACCGGGTCATGGACCGTACCCAAAACAGAACGAGACGGGTTCTGGGAAGGTTCGGGTTCGGGTTCAAGCGGGTCGGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E434850" ref_strand="+" ref_description="SGN-E434850 [STM-60-H19]">
      <seq>tcgacctttacggcgccgataccgggtcatggaccgtacccaaaacagaacgagacgggttctgggaaggttcgggttcgggcgggtcgggtcaagtgaagggtggagtgcctaccgggttgaaaccggacgtaacggtgtgtaaggaaggaggatgtgactataagacggtgcaggaggcggtgaatgctgcaccggagaacgagcaaacccggaagtttgtgatatggatcaaatccgggttgtatgaggagaaagttcgggtcgggttggagaagatgaatgtggtatttttgggtgatggaatgggtaaaaccgtcattacgggatcgttgagtgttggtcttgttggtgttactacttatgagactgcaactgttggagttgttggtgatggattcatggccagtggtatcaccttccaaaacacagccggtccggatgcgcaccaagccgtagcattccgatccgacagtgatctctcagttgtagaaaactgtgaattcattggcaatcaagacaccctatacgcccatgccttgcgccaatactacaagtcctgccgcatccaaggcaatgtagacttcattttcggaaactcagcttctttcttccaagattgtgacatcctaatagcacctcgancactccgtcctgaaaagggagagacgaatgctgtgactgctcatggcaggatagaccctgcacaatcaactggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="154070" stop="155958"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="154370" g_stop="154756" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="154757" i_stop="155320" i_length="564">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="155321" g_stop="155658" g_length="338"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="719" r_length="338" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E434850" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E434850" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="154370" e_stop="154756"/>
          <exon e_start="155321" e_stop="155658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGACCTTTACGGTGCTGATACCGGGTCATGGACCGTACCCAAAACAGAACGAGACGGGTTCTGGGAAGGTTCGGGTTCGGGTTCAAGCGGGTCGGGTCAGGTGAAGGGTGGAGTGCCGACCGGGTTGAAACCGGATGTAACGGTGTGTAAGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAAGGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAGGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTGTTTTTGGGTGATGGAATGGGTAAAACTGTCATTACGGGTTCGTTGAGTGTTGGTCTTGCTGGTGTTACTACTTATGAGACTGCAACTGTTGGTAAGTTTATTTGATTGAATTTGAATTTTAATACTTATGTTATGTTTATTACTATCTTATTCGTTATCATTACCTATGTTTACTTCATTTAGCATATTAGTATTTGTTATTGAACCTGTTATATGTTTTACCTTAGTCGAGGGTCTCGAGGAAACAATCCACATCAATCCCACTTGTATGGAATTACACTGATCATTGAGTAATATGACACCGTGCATTCATTACAAACCGTGGGATTGATTTTTCGTATGAAAAACGGAAGGCATAGTCCTTGCTCCATAGAAAACGCTAAGTTAGAATTTATTGTCGATGGGTTTGGAATGAGTATAATCTATACACATGTATACAATGAGCATTAACTTTGTGGTATGCGTATCCATAGATGGAGCGAAAAGCAATGGGCCTAGTGAACCTTTTTTGATCCGTCTCGGGATCATAGGGGTCTGTTAGAAGTGCAAAATGTTTGCATTTGTCATAAAACCTGCATTTGCTATTTGTTGTTGAAGACATACGGAGGACGTTTGTAGATTCGAGTCGTTCTAATGTTTAGTATTTGTAAAACAGGAGTTGTTGGTGATGGATTCATGGCTAGTGGTATCACCTTCCAAAACACAGCCGGTCCGGATGCTCACCAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTTCAAGACTGTGACATCCTAATAGCACCTCGACAACTCCGTCCTGAAAAGGGAGAGACGAATGCTGTGACTGCTCATGGCAGGATAGACCCTGCACAATCAACTGGT</genome_strand>
        <mrna_strand>TCGACCTTTACGGCGCCGATACCGGGTCATGGACCGTACCCAAAACAGAACGAGACGGGTTCTGGGAAGGTTCGGGTTCGGG--C--G-GG-TCGGGTCAAGTGAAGGGTGGAGTGCCTACCGGGTTGAAACCGGACGTAACGGTGTGTAAGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAACGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAAGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTATTTTTGGGTGATGGAATGGGTAAAACCGTCATTACGGGATCGTTGAGTGTTGGTCTTGTTGGTGTTACTACTTATGAGACTGCAACTGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGTTGGTGATGGATTCATGGCCAGTGGTATCACCTTCCAAAACACAGCCGGTCCGGATGCGCACCAAGCCGTAGCATTCCGATCCGACAGTGATCTCTCAGTTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCATGCCTTGCGCCAATACTACAAGTCCTGCCGCATCCAAGGCAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTCCAAGATTGTGACATCCTAATAGCACCTCGANCACTCCGTCCTGAAAAGGGAGAGACGAATGCTGTGACTGCTCATGGCAGGATAGACCCTGCACAATCAACTGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E409290" ref_strand="+" ref_description="SGN-E409290 [PPI-13-N1]">
      <seq>tcgacctttacggcgccgataccgggtcatggaccgtacccaaaacagaacgagacgggttctgggaaggttcgggttcgggcgggtcgggtcaagtgaagggtggagtgcctaccgggttgaaaccggacgtaacggtgtgtaaggaaggaggatgtgactataagacggtgcaggaggcggtgaatgctgcaccggagaacgagcaaacccggaagtttgtgatatggatcaaatccgggttgtatgaggagaaagttcgggtcgggttggagaagatgaatgtggtatttttgggtgatggaatgggtaaaaccgtcattacgggatcgttgagtgttggtcttgttggtgttactacttatgagactgcaactgttggagttgttggtgatggattc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="154070" stop="155640"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="154370" g_stop="154756" g_length="387"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="381" r_length="381" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="154757" i_stop="155320" i_length="564">
            <donor d_prob="0.998" d_score="0.98"/>
            <acceptor a_prob="0.965" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="155321" g_stop="155340" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="382" r_stop="401" r_length="20" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E409290" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>407</cumulative_length_of_scored_exons>
        <coverage percentage="1.015" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E409290" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="154370" e_stop="154756"/>
          <exon e_start="155321" e_stop="155340"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCGACCTTTACGGTGCTGATACCGGGTCATGGACCGTACCCAAAACAGAACGAGACGGGTTCTGGGAAGGTTCGGGTTCGGGTTCAAGCGGGTCGGGTCAGGTGAAGGGTGGAGTGCCGACCGGGTTGAAACCGGATGTAACGGTGTGTAAGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAAGGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAGGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTGTTTTTGGGTGATGGAATGGGTAAAACTGTCATTACGGGTTCGTTGAGTGTTGGTCTTGCTGGTGTTACTACTTATGAGACTGCAACTGTTGGTAAGTTTATTTGATTGAATTTGAATTTTAATACTTATGTTATGTTTATTACTATCTTATTCGTTATCATTACCTATGTTTACTTCATTTAGCATATTAGTATTTGTTATTGAACCTGTTATATGTTTTACCTTAGTCGAGGGTCTCGAGGAAACAATCCACATCAATCCCACTTGTATGGAATTACACTGATCATTGAGTAATATGACACCGTGCATTCATTACAAACCGTGGGATTGATTTTTCGTATGAAAAACGGAAGGCATAGTCCTTGCTCCATAGAAAACGCTAAGTTAGAATTTATTGTCGATGGGTTTGGAATGAGTATAATCTATACACATGTATACAATGAGCATTAACTTTGTGGTATGCGTATCCATAGATGGAGCGAAAAGCAATGGGCCTAGTGAACCTTTTTTGATCCGTCTCGGGATCATAGGGGTCTGTTAGAAGTGCAAAATGTTTGCATTTGTCATAAAACCTGCATTTGCTATTTGTTGTTGAAGACATACGGAGGACGTTTGTAGATTCGAGTCGTTCTAATGTTTAGTATTTGTAAAACAGGAGTTGTTGGTGATGGATTC</genome_strand>
        <mrna_strand>TCGACCTTTACGGCGCCGATACCGGGTCATGGACCGTACCCAAAACAGAACGAGACGGGTTCTGGGAAGGTTCGGGTTCGGG--C--G-GG-TCGGGTCAAGTGAAGGGTGGAGTGCCTACCGGGTTGAAACCGGACGTAACGGTGTGTAAGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAACGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAAGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTATTTTTGGGTGATGGAATGGGTAAAACCGTCATTACGGGATCGTTGAGTGTTGGTCTTGTTGGTGTTACTACTTATGAGACTGCAACTGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGTTGGTGATGGATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E395606" ref_strand="+" ref_description="SGN-E395606 [TUS-16-H14]">
      <seq>aaggaaggaggatgtgactataagacggtgcaggaggcggtgaatgctgcaccggagaaggagcaaacccggaagtttgtgatatggatcaaatccgggttgtatgaggagaaggttcgggtcgggttggagaagatgaatgtggtgtttttgggtgatggaatgggtaaaactgtcattacgggttcgttgagtgttggtcttgctggtgttactacttatgagactgcaactgttggagttgttggtgatggattcatggctagtggtatcaccttccaaaacacagccggtccggatgctcaccaagccgtagcattccgatccgacagtgatctttccgctgtagaaaactgtgaattcattggcaatcaagacaccctatacgcccacgctttgcgccaatactacaagtcctgccgtatccaaggtaatgtagacttcattttcggaaactcagcttctttctttcaagactgtgacatcctaatagcacctcgacaactccttcctgaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="154219" stop="155899"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="154519" g_stop="154756" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="238" r_length="238" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="154757" i_stop="155320" i_length="564">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="155321" g_stop="155599" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="239" r_stop="517" r_length="279" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E395606" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E395606" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="154519" e_stop="154756"/>
          <exon e_start="155321" e_stop="155599"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAAGGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAGGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTGTTTTTGGGTGATGGAATGGGTAAAACTGTCATTACGGGTTCGTTGAGTGTTGGTCTTGCTGGTGTTACTACTTATGAGACTGCAACTGTTGGTAAGTTTATTTGATTGAATTTGAATTTTAATACTTATGTTATGTTTATTACTATCTTATTCGTTATCATTACCTATGTTTACTTCATTTAGCATATTAGTATTTGTTATTGAACCTGTTATATGTTTTACCTTAGTCGAGGGTCTCGAGGAAACAATCCACATCAATCCCACTTGTATGGAATTACACTGATCATTGAGTAATATGACACCGTGCATTCATTACAAACCGTGGGATTGATTTTTCGTATGAAAAACGGAAGGCATAGTCCTTGCTCCATAGAAAACGCTAAGTTAGAATTTATTGTCGATGGGTTTGGAATGAGTATAATCTATACACATGTATACAATGAGCATTAACTTTGTGGTATGCGTATCCATAGATGGAGCGAAAAGCAATGGGCCTAGTGAACCTTTTTTGATCCGTCTCGGGATCATAGGGGTCTGTTAGAAGTGCAAAATGTTTGCATTTGTCATAAAACCTGCATTTGCTATTTGTTGTTGAAGACATACGGAGGACGTTTGTAGATTCGAGTCGTTCTAATGTTTAGTATTTGTAAAACAGGAGTTGTTGGTGATGGATTCATGGCTAGTGGTATCACCTTCCAAAACACAGCCGGTCCGGATGCTCACCAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTTCAAGACTGTGACATCCTAATAGCACCTCGACAACTCCGTCCTGAAA</genome_strand>
        <mrna_strand>AAGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAAGGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAGGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTGTTTTTGGGTGATGGAATGGGTAAAACTGTCATTACGGGTTCGTTGAGTGTTGGTCTTGCTGGTGTTACTACTTATGAGACTGCAACTGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGTTGGTGATGGATTCATGGCTAGTGGTATCACCTTCCAAAACACAGCCGGTCCGGATGCTCACCAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTTCAAGACTGTGACATCCTAATAGCACCTCGACAACTCCTTCCTGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E205803" ref_strand="+" ref_description="SGN-E205803 [cLEC-20-K9]">
      <seq>aggaaggaggatgtgactataagacggtgcacgaggcggtgaatgctgcaccggagaaggagcaaacccggaagtttgtgatatggatcaaatccgggttgtatgaggagaaggttcgggtcgggttggagaagatgaatgtggtgtttttgggtgatggaatgggtaaaactgtcattacgggttcgttgagtgttggtcttgctggtgttactacttatgagactgcaactgttggagttgttggtgatggattcatggctagtggtatcaccttccaaaacacagccggtccggatgctcaccaagccgtagcattccgatccgacagtgatctttccgctgtagaaaactgtgaattcattggcaatcaagacaccctatacgcccacgctttgcgccaatactacaagtcctgccgtatccaaggtaatgtagacttcattttcggaaactcagctcctttctttcaagactgtgacatcctaatagcacctcgacaactccgtcctgaaaagggagagacgaatgctgtgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="154220" stop="155922"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="154520" g_stop="154756" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="154757" i_stop="155320" i_length="564">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.965" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="155321" g_stop="155622" g_length="302"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="539" r_length="302" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E205803" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>539</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E205803" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="154520" e_stop="154756"/>
          <exon e_start="155321" e_stop="155622"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAAGGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAGGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTGTTTTTGGGTGATGGAATGGGTAAAACTGTCATTACGGGTTCGTTGAGTGTTGGTCTTGCTGGTGTTACTACTTATGAGACTGCAACTGTTGGTAAGTTTATTTGATTGAATTTGAATTTTAATACTTATGTTATGTTTATTACTATCTTATTCGTTATCATTACCTATGTTTACTTCATTTAGCATATTAGTATTTGTTATTGAACCTGTTATATGTTTTACCTTAGTCGAGGGTCTCGAGGAAACAATCCACATCAATCCCACTTGTATGGAATTACACTGATCATTGAGTAATATGACACCGTGCATTCATTACAAACCGTGGGATTGATTTTTCGTATGAAAAACGGAAGGCATAGTCCTTGCTCCATAGAAAACGCTAAGTTAGAATTTATTGTCGATGGGTTTGGAATGAGTATAATCTATACACATGTATACAATGAGCATTAACTTTGTGGTATGCGTATCCATAGATGGAGCGAAAAGCAATGGGCCTAGTGAACCTTTTTTGATCCGTCTCGGGATCATAGGGGTCTGTTAGAAGTGCAAAATGTTTGCATTTGTCATAAAACCTGCATTTGCTATTTGTTGTTGAAGACATACGGAGGACGTTTGTAGATTCGAGTCGTTCTAATGTTTAGTATTTGTAAAACAGGAGTTGTTGGTGATGGATTCATGGCTAGTGGTATCACCTTCCAAAACACAGCCGGTCCGGATGCTCACCAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTTCAAGACTGTGACATCCTAATAGCACCTCGACAACTCCGTCCTGAAAAGGGAGAGACGAATGCTGTGACT</genome_strand>
        <mrna_strand>AGGAAGGAGGATGTGACTATAAGACGGTGCACGAGGCGGTGAATGCTGCACCGGAGAAGGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAGGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTGTTTTTGGGTGATGGAATGGGTAAAACTGTCATTACGGGTTCGTTGAGTGTTGGTCTTGCTGGTGTTACTACTTATGAGACTGCAACTGTTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAGTTGTTGGTGATGGATTCATGGCTAGTGGTATCACCTTCCAAAACACAGCCGGTCCGGATGCTCACCAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTCCTTTCTTTCAAGACTGTGACATCCTAATAGCACCTCGACAACTCCGTCCTGAAAAGGGAGAGACGAATGCTGTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E207924" ref_strand="+" ref_description="SGN-E207924 [cLEC-34-B21]">
      <seq>caagccgtagcattccgatccgacagtgatctttccgctgtagaaaactgtgaattcattggcaatcaagacaccctatacgcccacgctttgcgccaatactacaagtcctgccgtatccaaggtaatgtagacttcattttcggaaactcagcttctttctttcaagactgtgacatcctaatagcacctcgacaactccgtcctgaaaagggagagacgaatgctgtgactgctcatggcaggatagaccctgcacaatcaactggtttcgtcttccaaaattgtttgatcaatggaactgataaatacatgaccttgtactacaacaaacccaaagtccacaaaaattttctgggaagaccatggaaggagtattctcggaccgtgtttctagattgtactttagaggctcttatatcgcctaacggatggttgccttggagtggtgatttcgcgttgaagactctatactacggagaatatagaaatactggtgccggagctaatacagcaggacgagtgtcgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="+" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="155089" stop="156217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="155389" g_stop="155917" g_length="529"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="529" r_length="529" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="+" ref_id="SGN-E207924" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>529</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E207924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="155389" e_stop="155917"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTTCAAGACTGTGACATCCTAATAGCACCTCGACAACTCCGTCCTGAAAAGGGAGAGACGAATGCTGTGACTGCTCATGGCAGGATAGACCCTGCACAATCAACTGGTTTCGTCTTCCAAAATTGTTTGATCAATGGAACTGATAAATACATGACCTTGTACTACAACAAACCCAAAGTCCACAAAAATTTTCTGGGAAGACCATGGAAGGAGTATTCTCGGACCGTGTTTCTAGATTGTACTTTAGAGGCTCTTATATCGCCTAACGGATGGTTGCCTTGGAGTGGTGATTTCGCGTTGAAGACTCTATACTACGGAGAATATAGAAATACTGGTGCCGGAGCTAATACAGCAGGACGAGTGTCGT</genome_strand>
        <mrna_strand>CAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTTCAAGACTGTGACATCCTAATAGCACCTCGACAACTCCGTCCTGAAAAGGGAGAGACGAATGCTGTGACTGCTCATGGCAGGATAGACCCTGCACAATCAACTGGTTTCGTCTTCCAAAATTGTTTGATCAATGGAACTGATAAATACATGACCTTGTACTACAACAAACCCAAAGTCCACAAAAATTTTCTGGGAAGACCATGGAAGGAGTATTCTCGGACCGTGTTTCTAGATTGTACTTTAGAGGCTCTTATATCGCCTAACGGATGGTTGCCTTGGAGTGGTGATTTCGCGTTGAAGACTCTATACTACGGAGAATATAGAAATACTGGTGCCGGAGCTAATACAGCAGGACGAGTGTCGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/cxgn-bacpublish-resources-xT8mOr/sgn_ests_tomato_potato" ref_id="SGN-E395605" ref_strand="+" ref_description="SGN-E395605 [TUS-16-H14]">
      <seq>tttttttttttagcaatatataactcatattataacaagtttcaaaattttccaacaatttggtacaagaggttatatattgatttttttcaagaaaaaaaaaacgatcggggtaggtatagggggaggggattacatatcaatgtggagaatcgaaaccatatgatgcgaggtaagata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C11HBa0054I23-ZLfRn/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C11HBa0054I23.1" temp_strand="-" temp_description="C11HBa0054I23.1  AC212431.1 htgs_phase:2 submitted_to_sgn_as:C11HBa0054I23 sequenced_by:ivf-caas upload_account_name:china11">
        <position start="156553" stop="155782"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="156261" g_stop="156082" g_length="180"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="180" r_length="180" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C11HBa0054I23.1" gen_strand="-" ref_id="SGN-E395605" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>180</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C11HBa0054I23.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E395605" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="156261" e_stop="156082"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TATAAGACTTTAGCAATATATAACTCATATTATAACAAGTTTCAAAATTTTCCAACAATTTGGTACAAGAGGTTATATATTGATTTTTTTCAAGAAAAAAAAAACGATCGGGGTAGGTATAGGGGGAGGGGATTACATAACAATGTGGAGAATCGAAACGATATGATGCGAGTTCAGATA</genome_strand>
        <mrna_strand>TTTTTTTTTTTAGCAATATATAACTCATATTATAACAAGTTTCAAAATTTTCCAACAATTTGGTACAAGAGGTTATATATTGATTTTTTTCAAGAAAAAAAAAACGATCGGGGTAGGTATAGGGGGAGGGGATTACATATCAATGTGGAGAATCGAAACCATATGATGCGAGGTAAGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>87</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="17136" PGL_stop="3156"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17136" e_stop="17074"/>
            <exon e_start="16963" e_stop="16501"/>
            <exon e_start="15581" e_stop="15501"/>
            <exon e_start="15421" e_stop="15299"/>
            <exon e_start="13371" e_stop="13302"/>
            <exon e_start="11362" e_stop="11265"/>
            <exon e_start="11177" e_stop="11073"/>
            <exon e_start="9564" e_stop="9511"/>
            <exon e_start="7718" e_stop="7575"/>
            <exon e_start="7462" e_stop="7409"/>
            <exon e_start="7327" e_stop="7253"/>
            <exon e_start="4099" e_stop="4016"/>
            <exon e_start="3935" e_stop="3156"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.396" acc_prob="0.761" e_score="1.000"/>
          <exon-intron don_prob="0.912" acc_prob="0.992" e_score="0.981"/>
          <exon-intron don_prob="0.575" acc_prob="0.994" e_score="0.975"/>
          <exon-intron don_prob="0.986" acc_prob="0.957" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="0.937" e_score="0.986"/>
          <exon-intron don_prob="0.615" acc_prob="0.980" e_score="0.980"/>
          <exon-intron don_prob="0.985" acc_prob="0.719" e_score="0.952"/>
          <exon-intron don_prob="0.827" acc_prob="0.762" e_score="0.981"/>
          <exon-intron don_prob="0.995" acc_prob="0.965" e_score="0.993"/>
          <exon-intron don_prob="0.993" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.719" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="17136" e_stop="17074" e_length="63"/>
          </exon>
          <intron i_serial="1" don_prob="0.396" acc_prob="0.761">
            <gDNA_intron_boundary i_start="17073" i_stop="16964" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="0.981">
            <gDNA_exon_boundary e_start="16963" e_stop="16501" e_length="463"/>
          </exon>
          <intron i_serial="2" don_prob="0.912" acc_prob="0.992">
            <gDNA_intron_boundary i_start="16500" i_stop="15582" i_length="919"/>
          </intron>
          <exon e_serial="3" e_score="0.975">
            <gDNA_exon_boundary e_start="15581" e_stop="15501" e_length="81"/>
          </exon>
          <intron i_serial="3" don_prob="0.575" acc_prob="0.994">
            <gDNA_intron_boundary i_start="15500" i_stop="15422" i_length="79"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="15421" e_stop="15299" e_length="123"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.957">
            <gDNA_intron_boundary i_start="15298" i_stop="13372" i_length="1927"/>
          </intron>
          <exon e_serial="5" e_score="0.986">
            <gDNA_exon_boundary e_start="13371" e_stop="13302" e_length="70"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.937">
            <gDNA_intron_boundary i_start="13301" i_stop="11363" i_length="1939"/>
          </intron>
          <exon e_serial="6" e_score="0.980">
            <gDNA_exon_boundary e_start="11362" e_stop="11265" e_length="98"/>
          </exon>
          <intron i_serial="6" don_prob="0.615" acc_prob="0.980">
            <gDNA_intron_boundary i_start="11264" i_stop="11178" i_length="87"/>
          </intron>
          <exon e_serial="7" e_score="0.952">
            <gDNA_exon_boundary e_start="11177" e_stop="11073" e_length="105"/>
          </exon>
          <intron i_serial="7" don_prob="0.985" acc_prob="0.719">
            <gDNA_intron_boundary i_start="11072" i_stop="9565" i_length="1508"/>
          </intron>
          <exon e_serial="8" e_score="0.981">
            <gDNA_exon_boundary e_start="9564" e_stop="9511" e_length="54"/>
          </exon>
          <intron i_serial="8" don_prob="0.827" acc_prob="0.762">
            <gDNA_intron_boundary i_start="9510" i_stop="7719" i_length="1792"/>
          </intron>
          <exon e_serial="9" e_score="0.993">
            <gDNA_exon_boundary e_start="7718" e_stop="7575" e_length="144"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.965">
            <gDNA_intron_boundary i_start="7574" i_stop="7463" i_length="112"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="7462" e_stop="7409" e_length="54"/>
          </exon>
          <intron i_serial="10" don_prob="0.993" acc_prob="1.000">
            <gDNA_intron_boundary i_start="7408" i_stop="7328" i_length="81"/>
          </intron>
          <exon e_serial="11" e_score="1.000">
            <gDNA_exon_boundary e_start="7327" e_stop="7253" e_length="75"/>
          </exon>
          <intron i_serial="11" don_prob="0.995" acc_prob="0.958">
            <gDNA_intron_boundary i_start="7252" i_stop="4100" i_length="3153"/>
          </intron>
          <exon e_serial="12" e_score="1.000">
            <gDNA_exon_boundary e_start="4099" e_stop="4016" e_length="84"/>
          </exon>
          <intron i_serial="12" don_prob="0.992" acc_prob="0.719">
            <gDNA_intron_boundary i_start="4015" i_stop="3936" i_length="80"/>
          </intron>
          <exon e_serial="13" e_score="0.997">
            <gDNA_exon_boundary e_start="3935" e_stop="3156" e_length="780"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17136" stop="17074"/>
              <exon start="16963" stop="16501"/>
              <exon start="15581" stop="15501"/>
              <exon start="15421" stop="15299"/>
              <exon start="13371" stop="13302"/>
              <exon start="11362" stop="11265"/>
              <exon start="11177" stop="11073"/>
              <exon start="9564" stop="9511"/>
              <exon start="7718" stop="7575"/>
              <exon start="7462" stop="7409"/>
              <exon start="7327" stop="7253"/>
              <exon start="4099" stop="4016"/>
              <exon start="3935" stop="3156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624190" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16753" stop="16501"/>
              <exon start="15581" stop="15501"/>
              <exon start="15421" stop="15299"/>
              <exon start="13371" stop="13302"/>
              <exon start="11362" stop="11278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416030" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16753" stop="16501"/>
              <exon start="15581" stop="15501"/>
              <exon start="15421" stop="15299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438156" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16650" stop="16501"/>
              <exon start="15581" stop="15501"/>
              <exon start="15421" stop="15299"/>
              <exon start="13371" stop="13302"/>
              <exon start="11362" stop="11265"/>
              <exon start="11177" stop="11073"/>
              <exon start="9564" stop="9511"/>
              <exon start="7718" stop="7575"/>
              <exon start="7462" stop="7409"/>
              <exon start="7327" stop="7253"/>
              <exon start="4099" stop="4016"/>
              <exon start="3935" stop="3156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E624561" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9560" stop="9511"/>
              <exon start="7718" stop="7575"/>
              <exon start="7462" stop="7409"/>
              <exon start="7327" stop="7253"/>
              <exon start="4099" stop="4016"/>
              <exon start="3935" stop="3540"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576934" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9533" stop="9511"/>
              <exon start="7718" stop="7575"/>
              <exon start="7462" stop="7409"/>
              <exon start="7327" stop="7253"/>
              <exon start="4099" stop="4016"/>
              <exon start="3935" stop="3835"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E444133" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="9531" stop="9511"/>
              <exon start="7718" stop="7575"/>
              <exon start="7462" stop="7409"/>
              <exon start="7327" stop="7253"/>
              <exon start="4099" stop="4016"/>
              <exon start="3935" stop="3705"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E419450" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7650" stop="7575"/>
              <exon start="7462" stop="7409"/>
              <exon start="7327" stop="7253"/>
              <exon start="4099" stop="4016"/>
              <exon start="3935" stop="3615"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588400" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7436" stop="7409"/>
              <exon start="7327" stop="7253"/>
              <exon start="4099" stop="4016"/>
              <exon start="3935" stop="3566"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E289198" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4085" stop="4016"/>
              <exon start="3935" stop="3479"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244539" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4085" stop="4016"/>
              <exon start="3935" stop="3479"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E244546" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4077" stop="4016"/>
              <exon start="3935" stop="3676"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E240543" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4027" stop="4016"/>
              <exon start="3935" stop="3178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540504" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAATTCAAGAGAAAAGGCTCCTTATTTGATATGTGTTGAAGTTTTAAAATGTGAAAGCCCCAA : TTCAAAAGACACATTAAACTCTCAAAAGCTATCTAAGGGAGGGATCCCTCTGGCAAATGGAGATGTTCTATTGCCAAAGCCTCCTCCTTGGGCTTATCCTCTTTGGACAGGACAGGACAATCACAATGACAGAATGTCAAGGTCTGCATCTCAGGCCATAGACCAAGCAATGGCTCAATTATGGGATACTAAAGTGAAATTTGTGCGAGTGAATTTTTCGGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCTGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAGGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAG : TTAGCTGCATTAAAAGGAGAAGCACCTCCTGGACTACCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAG : GTCACAAATGGTGGTCTTCCCAATGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCT : TTCATCGTGAAGAGTGGTGATGATTGCAGACAAGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACG : ATATCTTCCAGGAAGCTGGTCTGCCGCTTTGGTTGCGTCCTTATGAAGTCTTAGTTACATCCTCTTATACTGCTTTAATTGAAACAATTCCAGATACG : GCCTCAATTCATTCTATTAAAAGTAGATTTCCTCACATCACAAGTCTACGTGAATTTTATGTTGCCAAGTATCTGGAGAATTCTCCAACCTTTAAGCTTGCCCAG : AGAAATTTTGTTGAAAGCATGGCTGGATATTCTCTGGTTTGCTACCTTTTGCAG : ATAAAGGATCGACACAACGGAAATCTTCTATTGGACGAAGAAGGACATATCATACACATTGACTTTGGTTTCATGCTATCTAATTCACCTGGAGGTGTAAATTTTGAAAGTGCACCATTTAAATTGACACGTGAACTTCTTGAG : ATCATGGATTCTGATGCTGAAGGAGTTCCAAGCGAGTTCTTTGATTATTTCAAA : GTTCTATGCATCCAAGGGTTTCTCACATGTCGGAAGCACGCAGAGCGTATAATTCTTCTTGTCGAGATGCTTCAG : GATTCTGGTTACCCTTGTTTCAAGGGTGGTCCCCGAACAATTCAGAACCTAAGAAAGAGATTTCATCTTAGTTTAACAGAAGAG : CAATGTGTTTCCTTGGTACTTTCTTTGATTAGCAGTAGCTTGGATGCGTGGCGTACTCGTCAATATGATTATTATCAGAGGGTCTTAAATGGGATATTATGAGGTCAAAGTGAGTTTATCCACACCGAAACGTGATTATACATGTGAAGAGAAACCGATCTTTAACTTGTTTGCTGAGAGGGGCTTGGTTGGGAAAGAGCAATTCACTATATGAACGTGTTCTTCTGATTCTGTCGAGGTTAAAGGATTGCTTGTCCTTTGCAGTTTGCTTCTCTTTCTGAGGAATTTGTAGTTGTACCTGCGAATGTTGTATTGAAATATACCAGGTGCAAGCTCTCTTCAAGAAGAGCTTTAATTTCTAGTTTCACTCAATTTTCAAGATTATTGGACAAAGGCATGGGTTGTCTTCAGTGAAGAGATTTGTCGAGTACACCCACCCACCCCGTGGGTACATACTGTACAGAGCTGTGTAAGAGATTGCAACAGTGGTGGCTTGCTGCCAGAACGCGAGAGACAGACAGACGGCTGTTGGTACCGTTTGAATTGAATCATGAGTATGCTGGTGCAACATGATATTTGGTTTGTACAATAGCTTATTTGCTTTGATTTTGTTTTTCATTTTCCCTTTTATTGTGTCAAAGGCATTATTTAGATTAGCAGTAGGAAAATTGCAGCCTGCTCTTAATTTTCAAGTCTTTGATTCTTTGTGTTCACCAGGAGATTCTGAAACAGCAGAGTTGTAATGTATAATATTTTTTGTCCACCACACCTCTTCATAGT</gDNA_template>
            <first_frame> E  F  K  R  K  G  S  L  F  D  M  C  *  S  F  K  M  *  K  P  Q  :  F  K  R  H  I  K  L  S  K  A  I  *  G  R  D  P  S  G  K  W  R  C  S  I  A  K  A  S  S  L  G  L  S  S  L  D  R  T  G  Q  S  Q  *  Q  N  V  K  V  C  I  S  G  H  R  P  S  N  G  S  I  M  G  Y  *  S  E  I  C  A  S  E  F  F  G  R  D  A  I  R  V  C  N  R  S  L  Q  P  W  F  C  F  R  K  L  *  *  M  Q  R  G  P  I  S  S  I  E  V  *  C  Y  *  F  R  M  G  T  G  C  L  D  C  R  S  W  C  *  D  G  G  Y  S  G  P  G  T  T  K  K  E  R  A  S  K  G  S  Q  Y  S  S  H  R  G  S  *   : V  S  C  I  K  R  R  S  T  S  W  T  T  F  E  R  C  W  S  G  F  I  *  C  T  T  *   : G  H  K  W  W  S  S  Q  C  *  *  C  T  F  W  R  T  L  G  S  Q  E  G  K  N  T  Q  M  L  W  L  W  E  I  T  W  V  G  L  E  I   : F  H  R  E  E  W  *  *  L  Q  T  R  A  S  C  C  T  T  Y  L  P  L  L  R :   Y  L  P  G  S  W  S  A  A  L  V  A  S  L  *  S  L  S  Y  I  L  L  Y  C  F  N  *  N  N  S  R  Y   : G  L  N  S  F  Y  *  K  *  I  S  S  H  H  K  S  T  *  I  L  C  C  Q  V  S  G  E  F  S  N  L  *  A  C  P   : E  K  F  C  *  K  H  G  W  I  F  S  G  L  L  P  F  A   : D  K  G  S  T  Q  R  K  S  S  I  G  R  R  R  T  Y  H  T  H  *  L  W  F  H  A  I  *  F  T  W  R  C  K  F  *  K  C  T  I  *  I  D  T  *  T  S  *   : D  H  G  F  *  C  *  R  S  S  K  R  V  L  *  L  F  Q   : S  S  M  H  P  R  V  S  H  M  S  E  A  R  R  A  Y  N  S  S  C  R  D  A  S   : G  F  W  L  P  L  F  Q  G  W  S  P  N  N  S  E  P  K  K  E  I  S  S  *  F  N  R  R   : A  M  C  F  L  G  T  F  F  D  *  Q  *  L  G  C  V  A  Y  S  S  I  *  L  L  S  E  G  L  K  W  D  I  M  R  S  K  *  V  Y  P  H  R  N  V  I  I  H  V  K  R  N  R  S  L  T  C  L  L  R  G  A  W  L  G  K  S  N  S  L  Y  E  R  V  L  L  I  L  S  R  L  K  D  C  L  S  F  A  V  C  F  S  F  *  G  I  C  S  C  T  C  E  C  C  I  E  I  Y  Q  V  Q  A  L  F  K  K  S  F  N  F  *  F  H  S  I  F  K  I  I  G  Q  R  H  G  L  S  S  V  K  R  F  V  E  Y  T  H  P  P  R  G  Y  I  L  Y  R  A  V  *  E  I  A  T  V  V  A  C  C  Q  N  A  R  D  R  Q  T  A  V  G  T  V  *  I  E  S  *  V  C  W  C  N  M  I  F  G  L  Y  N  S  L  F  A  L  I  L  F  F  I  F  P  F  I  V  S  K  A  L  F  R  L  A  V  G  K  L  Q  P  A  L  N  F  Q  V  F  D  S  L  C  S  P  G  D  S  E  T  A  E  L  *  C  I  I  F  F  V  H  H  T  S  S  *  </first_frame>
            <second_frame>  N  S  R  E  K  A  P  Y  L  I  C  V  E  V  L  K  C  E  S  P  N :   S  K  D  T  L  N  S  Q  K  L  S  K  G  G  I  P  L  A  N  G  D  V  L  L  P  K  P  P  P  W  A  Y  P  L  W  T  G  Q  D  N  H  N  D  R  M  S  R  S  A  S  Q  A  I  D  Q  A  M  A  Q  L  W  D  T  K  V  K  F  V  R  V  N  F  S  V  E  M  Q  S  E  S  A  I  D  H  C  S  L  G  S  A  S  E  S  Y  S  K  C  R  E  V  P  S  L  P  L  K  S  D  A  I  D  S  E  W  V  R  V  V  L  T  V  D  P  G  V  R  M  E  D  I  V  D  Q  E  P  P  R  K  K  E  H  R  R  V  P  S  T  V  A  I  E  E  V  K  :  L  A  A  L  K  G  E  A  P  P  G  L  P  L  K  G  A  G  Q  D  S  S  D  A  Q  P  K  :  V  T  N  G  G  L  P  N  V  S  D  A  L  S  G  E  L  W  E  V  K  K  E  R  I  R  K  C  S  G  Y  G  K  L  P  G  W  D  L  R  S  :  F  I  V  K  S  G  D  D  C  R  Q  E  H  L  A  V  Q  L  I  S  H  F  Y   : D  I  F  Q  E  A  G  L  P  L  W  L  R  P  Y  E  V  L  V  T  S  S  Y  T  A  L  I  E  T  I  P  D  T  :  A  S  I  H  S  I  K  S  R  F  P  H  I  T  S  L  R  E  F  Y  V  A  K  Y  L  E  N  S  P  T  F  K  L  A  Q  :  R  N  F  V  E  S  M  A  G  Y  S  L  V  C  Y  L  L  Q  :  I  K  D  R  H  N  G  N  L  L  L  D  E  E  G  H  I  I  H  I  D  F  G  F  M  L  S  N  S  P  G  G  V  N  F  E  S  A  P  F  K  L  T  R  E  L  L  E  :  I  M  D  S  D  A  E  G  V  P  S  E  F  F  D  Y  F  K  :  V  L  C  I  Q  G  F  L  T  C  R  K  H  A  E  R  I  I  L  L  V  E  M  L  Q  :  D  S  G  Y  P  C  F  K  G  G  P  R  T  I  Q  N  L  R  K  R  F  H  L  S  L  T  E  E  :  Q  C  V  S  L  V  L  S  L  I  S  S  S  L  D  A  W  R  T  R  Q  Y  D  Y  Y  Q  R  V  L  N  G  I  L  *  G  Q  S  E  F  I  H  T  E  T  *  L  Y  M  *  R  E  T  D  L  *  L  V  C  *  E  G  L  G  W  E  R  A  I  H  Y  M  N  V  F  F  *  F  C  R  G  *  R  I  A  C  P  L  Q  F  A  S  L  S  E  E  F  V  V  V  P  A  N  V  V  L  K  Y  T  R  C  K  L  S  S  R  R  A  L  I  S  S  F  T  Q  F  S  R  L  L  D  K  G  M  G  C  L  Q  *  R  D  L  S  S  T  P  T  H  P  V  G  T  Y  C  T  E  L  C  K  R  L  Q  Q  W  W  L  A  A  R  T  R  E  T  D  R  R  L  L  V  P  F  E  L  N  H  E  Y  A  G  A  T  *  Y  L  V  C  T  I  A  Y  L  L  *  F  C  F  S  F  S  L  L  L  C  Q  R  H  Y  L  D  *  Q  *  E  N  C  S  L  L  L  I  F  K  S  L  I  L  C  V  H  Q  E  I  L  K  Q  Q  S  C  N  V  *  Y  F  L  S  T  T  P  L  H  S </second_frame>
            <third_frame>   I  Q  E  K  R  L  L  I  *  Y  V  L  K  F  *  N  V  K  A  P   : I  Q  K  T  H  *  T  L  K  S  Y  L  R  E  G  S  L  W  Q  M  E  M  F  Y  C  Q  S  L  L  L  G  L  I  L  F  G  Q  D  R  T  I  T  M  T  E  C  Q  G  L  H  L  R  P  *  T  K  Q  W  L  N  Y  G  I  L  K  *  N  L  C  E  *  I  F  R  *  R  C  N  Q  S  L  Q  *  I  I  A  A  L  V  L  L  Q  K  V  I  V  N  A  E  R  S  H  L  F  H  *  S  L  M  L  L  I  Q  N  G  Y  G  L  S  *  L  *  I  L  V  L  G  W  R  I  *  W  T  R  N  H  Q  E  R  K  S  I  E  G  F  P  V  Q  *  P  S  R  K  L  S :   *  L  H  *  K  E  K  H  L  L  D  Y  L  *  K  V  L  V  R  I  H  L  M  H  N  L  R :   S  Q  M  V  V  F  P  M  L  V  M  H  F  L  E  N  S  G  K  S  R  R  K  E  Y  A  N  A  L  V  M  G  N  Y  L  G  G  T  *  D  L :   S  S  *  R  V  V  M  I  A  D  K  S  I  L  L  Y  N  L  S  P  T  S  T  :  I  S  S  R  K  L  V  C  R  F  G  C  V  L  M  K  S  *  L  H  P  L  I  L  L  *  L  K  Q  F  Q  I  R :   P  Q  F  I  L  L  K  V  D  F  L  T  S  Q  V  Y  V  N  F  M  L  P  S  I  W  R  I  L  Q  P  L  S  L  P  R :   E  I  L  L  K  A  W  L  D  I  L  W  F  A  T  F  C  R :   *  R  I  D  T  T  E  I  F  Y  W  T  K  K  D  I  S  Y  T  L  T  L  V  S  C  Y  L  I  H  L  E  V  *  I  L  K  V  H  H  L  N  *  H  V  N  F  L  R :   S  W  I  L  M  L  K  E  F  Q  A  S  S  L  I  I  S  K :   F  Y  A  S  K  G  F  S  H  V  G  S  T  Q  S  V  *  F  F  L  S  R  C  F  R :   I  L  V  T  L  V  S  R  V  V  P  E  Q  F  R  T  *  E  R  D  F  I  L  V  *  Q  K  S :   N  V  F  P  W  Y  F  L  *  L  A  V  A  W  M  R  G  V  L  V  N  M  I  I  I  R  G  S  *  M  G  Y  Y  E  V  K  V  S  L  S  T  P  K  R  D  Y  T  C  E  E  K  P  I  F  N  L  F  A  E  R  G  L  V  G  K  E  Q  F  T  I  *  T  C  S  S  D  S  V  E  V  K  G  L  L  V  L  C  S  L  L  L  F  L  R  N  L  *  L  Y  L  R  M  L  Y  *  N  I  P  G  A  S  S  L  Q  E  E  L  *  F  L  V  S  L  N  F  Q  D  Y  W  T  K  A  W  V  V  F  S  E  E  I  C  R  V  H  P  P  T  P  W  V  H  T  V  Q  S  C  V  R  D  C  N  S  G  G  L  L  P  E  R  E  R  Q  T  D  G  C  W  Y  R  L  N  *  I  M  S  M  L  V  Q  H  D  I  W  F  V  Q  *  L  I  C  F  D  F  V  F  H  F  P  F  Y  C  V  K  G  I  I  *  I  S  S  R  K  I  A  A  C  S  *  F  S  S  L  *  F  F  V  F  T  R  R  F  *  N  S  R  V  V  M  Y  N  I  F  C  P  P  H  L  F  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17135" stop="17074"/>
                    <exon start="16963" stop="16501"/>
                    <exon start="15581" stop="15501"/>
                    <exon start="15421" stop="15299"/>
                    <exon start="13371" stop="13302"/>
                    <exon start="11362" stop="11265"/>
                    <exon start="11177" stop="11073"/>
                    <exon start="9564" stop="9511"/>
                    <exon start="7718" stop="7575"/>
                    <exon start="7462" stop="7409"/>
                    <exon start="7327" stop="7253"/>
                    <exon start="4099" stop="4016"/>
                    <exon start="3935" stop="3834"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1512</number_coding_nucleotides>
                  <number_encoded_amino_acids>504</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSREKAPYLICVEVLKCESPNSKDTLNSQKLSKGGIPLANGDVLLPKPPPWAYPLWTGQDNHNDRMSRSASQAIDQAMAQLWDTKVKFVRVNFSVEMQSESAIDHCSLGSASESYSKCREVPSLPLKSDAIDSEWVRVVLTVDPGVRMEDIVDQEPPRKKEHRRVPSTVAIEEVKLAALKGEAPPGLPLKGAGQDSSDAQPKVTNGGLPNVSDALSGELWEVKKERIRKCSGYGKLPGWDLRSFIVKSGDDCRQEHLAVQLISHFYDIFQEAGLPLWLRPYEVLVTSSYTALIETIPDTASIHSIKSRFPHITSLREFYVAKYLENSPTFKLAQRNFVESMAGYSLVCYLLQIKDRHNGNLLLDEEGHIIHIDFGFMLSNSPGGVNFESAPFKLTRELLEIMDSDAEGVPSEFFDYFKVLCIQGFLTCRKHAERIILLVEMLQDSGYPCFKGGPRTIQNLRKRFHLSLTEEQCVSLVLSLISSSLDAWRTRQYDYYQRVLNGIL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="16933" e_stop="16501"/>
            <exon e_start="15581" e_stop="15501"/>
            <exon e_start="15421" e_stop="15299"/>
            <exon e_start="13371" e_stop="13302"/>
            <exon e_start="13189" e_stop="13183"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.912" acc_prob="0.992" e_score="0.982"/>
          <exon-intron don_prob="0.575" acc_prob="0.994" e_score="0.975"/>
          <exon-intron don_prob="0.986" acc_prob="0.957" e_score="0.992"/>
          <exon-intron don_prob="1.000" acc_prob="0.781" e_score="0.971"/>
          <exon-only e_score="0.857"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="16933" e_stop="16501" e_length="433"/>
          </exon>
          <intron i_serial="1" don_prob="0.912" acc_prob="0.992">
            <gDNA_intron_boundary i_start="16500" i_stop="15582" i_length="919"/>
          </intron>
          <exon e_serial="2" e_score="0.975">
            <gDNA_exon_boundary e_start="15581" e_stop="15501" e_length="81"/>
          </exon>
          <intron i_serial="2" don_prob="0.575" acc_prob="0.994">
            <gDNA_intron_boundary i_start="15500" i_stop="15422" i_length="79"/>
          </intron>
          <exon e_serial="3" e_score="0.992">
            <gDNA_exon_boundary e_start="15421" e_stop="15299" e_length="123"/>
          </exon>
          <intron i_serial="3" don_prob="0.986" acc_prob="0.957">
            <gDNA_intron_boundary i_start="15298" i_stop="13372" i_length="1927"/>
          </intron>
          <exon e_serial="4" e_score="0.971">
            <gDNA_exon_boundary e_start="13371" e_stop="13302" e_length="70"/>
          </exon>
          <intron i_serial="4" don_prob="1.000" acc_prob="0.781">
            <gDNA_intron_boundary i_start="13301" i_stop="13190" i_length="112"/>
          </intron>
          <exon e_serial="5" e_score="0.857">
            <gDNA_exon_boundary e_start="13189" e_stop="13183" e_length="7"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16933" stop="16501"/>
              <exon start="15581" stop="15501"/>
              <exon start="15421" stop="15299"/>
              <exon start="13371" stop="13302"/>
              <exon start="13189" stop="13183"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E558172" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16753" stop="16501"/>
              <exon start="15581" stop="15501"/>
              <exon start="15421" stop="15299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E438156" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCTAAGGGAGGGATCCCTCTGGCAAATGGAGATGTTCTATTGCCAAAGCCTCCTCCTTGGGCTTATCCTCTTTGGACAGGACAGGACAATCACAATGACAGAATGTCAAGGTCTGCATCTCAGGCCATAGACCAAGCAATGGCTCAATTATGGGATACTAAAGTGAAATTTGTGCGAGTGAATTTTTCGGTAGAGATGCAATCAGAGTCTGCAATAGATCATTGCAGCCTTGGTTCTGCTTCAGAAAGTTATAGTAAATGCAGAGAGGTCCCATCTCTTCCATTGAAGTCTGATGCTATTGATTCAGAATGGGTACGGGTTGTCTTGACTGTAGATCCTGGTGTTAGGATGGAGGATATAGTGGACCAGGAACCACCAAGAAAGAAAGAGCATCGAAGGGTTCCCAGTACAGTAGCCATCGAGGAAGTTAAG : TTAGCTGCATTAAAAGGAGAAGCACCTCCTGGACTACCTTTGAAAGGTGCTGGTCAGGATTCATCTGATGCACAACCTAAG : GTCACAAATGGTGGTCTTCCCAATGTTAGTGATGCACTTTCTGGAGAACTCTGGGAAGTCAAGAAGGAAAGAATACGCAAATGCTCTGGTTATGGGAAATTACCTGGGTGGGACTTGAGATCT : TTCATCGTGAAGAGTGGTGATGATTGCAGACAAGAGCATCTTGCTGTACAACTTATCTCCCACTTCTACG : ATAGCTT</gDNA_template>
            <first_frame> I  *  G  R  D  P  S  G  K  W  R  C  S  I  A  K  A  S  S  L  G  L  S  S  L  D  R  T  G  Q  S  Q  *  Q  N  V  K  V  C  I  S  G  H  R  P  S  N  G  S  I  M  G  Y  *  S  E  I  C  A  S  E  F  F  G  R  D  A  I  R  V  C  N  R  S  L  Q  P  W  F  C  F  R  K  L  *  *  M  Q  R  G  P  I  S  S  I  E  V  *  C  Y  *  F  R  M  G  T  G  C  L  D  C  R  S  W  C  *  D  G  G  Y  S  G  P  G  T  T  K  K  E  R  A  S  K  G  S  Q  Y  S  S  H  R  G  S  *   : V  S  C  I  K  R  R  S  T  S  W  T  T  F  E  R  C  W  S  G  F  I  *  C  T  T  *   : G  H  K  W  W  S  S  Q  C  *  *  C  T  F  W  R  T  L  G  S  Q  E  G  K  N  T  Q  M  L  W  L  W  E  I  T  W  V  G  L  E  I   : F  H  R  E  E  W  *  *  L  Q  T  R  A  S  C  C  T  T  Y  L  P  L  L  R :   *  L </first_frame>
            <second_frame>  S  K  G  G  I  P  L  A  N  G  D  V  L  L  P  K  P  P  P  W  A  Y  P  L  W  T  G  Q  D  N  H  N  D  R  M  S  R  S  A  S  Q  A  I  D  Q  A  M  A  Q  L  W  D  T  K  V  K  F  V  R  V  N  F  S  V  E  M  Q  S  E  S  A  I  D  H  C  S  L  G  S  A  S  E  S  Y  S  K  C  R  E  V  P  S  L  P  L  K  S  D  A  I  D  S  E  W  V  R  V  V  L  T  V  D  P  G  V  R  M  E  D  I  V  D  Q  E  P  P  R  K  K  E  H  R  R  V  P  S  T  V  A  I  E  E  V  K  :  L  A  A  L  K  G  E  A  P  P  G  L  P  L  K  G  A  G  Q  D  S  S  D  A  Q  P  K  :  V  T  N  G  G  L  P  N  V  S  D  A  L  S  G  E  L  W  E  V  K  K  E  R  I  R  K  C  S  G  Y  G  K  L  P  G  W  D  L  R  S  :  F  I  V  K  S  G  D  D  C  R  Q  E  H  L  A  V  Q  L  I  S  H  F  Y   : D  S   </second_frame>
            <third_frame>   L  R  E  G  S  L  W  Q  M  E  M  F  Y  C  Q  S  L  L  L  G  L  I  L  F  G  Q  D  R  T  I  T  M  T  E  C  Q  G  L  H  L  R  P  *  T  K  Q  W  L  N  Y  G  I  L  K  *  N  L  C  E  *  I  F  R  *  R  C  N  Q  S  L  Q  *  I  I  A  A  L  V  L  L  Q  K  V  I  V  N  A  E  R  S  H  L  F  H  *  S  L  M  L  L  I  Q  N  G  Y  G  L  S  *  L  *  I  L  V  L  G  W  R  I  *  W  T  R  N  H  Q  E  R  K  S  I  E  G  F  P  V  Q  *  P  S  R  K  L  S :   *  L  H  *  K  E  K  H  L  L  D  Y  L  *  K  V  L  V  R  I  H  L  M  H  N  L  R :   S  Q  M  V  V  F  P  M  L  V  M  H  F  L  E  N  S  G  K  S  R  R  K  E  Y  A  N  A  L  V  M  G  N  Y  L  G  G  T  *  D  L :   S  S  *  R  V  V  M  I  A  D  K  S  I  L  L  Y  N  L  S  P  T  S  T  :  I  A  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16932" stop="16501"/>
                    <exon start="15581" stop="15501"/>
                    <exon start="15421" stop="15299"/>
                    <exon start="13371" stop="13302"/>
                    <exon start="13189" stop="13185"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>711</number_coding_nucleotides>
                  <number_encoded_amino_acids>237</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SKGGIPLANGDVLLPKPPPWAYPLWTGQDNHNDRMSRSASQAIDQAMAQLWDTKVKFVRVNFSVEMQSESAIDHCSLGSASESYSKCREVPSLPLKSDAIDSEWVRVVLTVDPGVRMEDIVDQEPPRKKEHRRVPSTVAIEEVKLAALKGEAPPGLPLKGAGQDSSDAQPKVTNGGLPNVSDALSGELWEVKKERIRKCSGYGKLPGWDLRSFIVKSGDDCRQEHLAVQLISHFYDS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="28291" PGL_stop="29474"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28291" e_stop="29474"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.991"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.991">
            <gDNA_exon_boundary e_start="28291" e_stop="29474" e_length="1184"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28291" stop="28972"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E315713" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28291" stop="28795"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326621" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28359" stop="28962"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E576405" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28360" stop="28937"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482590" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28361" stop="28888"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414254" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28361" stop="28733"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E473535" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28513" stop="29145"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E327317" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28570" stop="29338"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E348508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29133" stop="29474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E227435" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAAACGAAGCCAAAGCTTGCAGTATAAGATTGAAATTTGGGAATTGTGAATTTGGATAAACCCTAGATTGGAATCGATAGATTCTCTATCCATTTACGTAAAATTCAAGCTCAATTTCTACAGTAACGCCCAAATTCACTGCATTTTCTCTCTCATCCCCTATAAACTCGATGCAATTTCGCAGGTTCTACACCTCTCTAGCGAATTCTAACCGCAACCCATTTCTCCTATATCGAAATCTCACAAACCCTTTTGCTGTTTTCGACCCTAACCCACAGTTTCTCTCTACACAAAGAATCTTGAAAAACTGGGTTCAAAGGCCAATTCGTGTGTCGAAACGTTTTGTCTCATCATTTCCTGCTATGGCAGAAGGAAGAAGACCCACTCATGTGCCTATACCACCCCCAGAAACTGCTGATAAGGCGGAATTGTATCGAGCACTTGAGGCTGCGGTGGGGTCGCAGTTTAGTTCAGAGCCATTGGCACCGGAGCCTCATCCTTTGATTATTGTGGTTAGTGGTCCAAGTGGGGTTGGTAAAGATGCTGTGATTAAAAGGCTTAGAGAAGTTAGGGAGAATATTCATTTTGTTGTTACTGCAACGACAAGGGGGAAAAGGCCGGGTGAGGTTGATGGAAAAGATTACTTTTTTACGAGTAAAGAAGAGTTTTTGTCAATGATTGAGAGACATGAGTTGTTGGAGTATGCATTGGTGTATGGGGATTATAAGGGTATACCAAAGCAACAAATTAGGGATCATATGGCTAAAGGATTGGATATTGTGTTGAGAGTTGATATACAAGGTGCAGCAACACTGAGGAGGATTTTGAGAAATTCTGCAGTGTTTGTGTTCTTGGTGGCGGAGAGTGAAGATGCATTGGTTAAGAGGTTGATTGATAGGAAGACTGAGACTAAAGAGACTTTGCTAGTGAGAATTGCAACGTCTCGAGAGGAAGTGAGGCATATGGGGGAGTTTGATTATGTGGTAGTGAATAGAGAAGGAGAGTTGGAGAATTCTGTTAAGTTAATGGAGTCTATTATTGATGCTGAGAAAGCTAAAGTGAGGCAAAGAACAGTGACAATTTAGAGAGTCTGTTTTTCAGTTTTTTGATCTGTTTTTGATTAAGTTGAGCTGATACTCTTAATGTTGTCTTGTATTCAATTTATGCAACATTGTTTTTCCTA</gDNA_template>
            <first_frame> R  N  E  A  K  A  C  S  I  R  L  K  F  G  N  C  E  F  G  *  T  L  D  W  N  R  *  I  L  Y  P  F  T  *  N  S  S  S  I  S  T  V  T  P  K  F  T  A  F  S  L  S  S  P  I  N  S  M  Q  F  R  R  F  Y  T  S  L  A  N  S  N  R  N  P  F  L  L  Y  R  N  L  T  N  P  F  A  V  F  D  P  N  P  Q  F  L  S  T  Q  R  I  L  K  N  W  V  Q  R  P  I  R  V  S  K  R  F  V  S  S  F  P  A  M  A  E  G  R  R  P  T  H  V  P  I  P  P  P  E  T  A  D  K  A  E  L  Y  R  A  L  E  A  A  V  G  S  Q  F  S  S  E  P  L  A  P  E  P  H  P  L  I  I  V  V  S  G  P  S  G  V  G  K  D  A  V  I  K  R  L  R  E  V  R  E  N  I  H  F  V  V  T  A  T  T  R  G  K  R  P  G  E  V  D  G  K  D  Y  F  F  T  S  K  E  E  F  L  S  M  I  E  R  H  E  L  L  E  Y  A  L  V  Y  G  D  Y  K  G  I  P  K  Q  Q  I  R  D  H  M  A  K  G  L  D  I  V  L  R  V  D  I  Q  G  A  A  T  L  R  R  I  L  R  N  S  A  V  F  V  F  L  V  A  E  S  E  D  A  L  V  K  R  L  I  D  R  K  T  E  T  K  E  T  L  L  V  R  I  A  T  S  R  E  E  V  R  H  M  G  E  F  D  Y  V  V  V  N  R  E  G  E  L  E  N  S  V  K  L  M  E  S  I  I  D  A  E  K  A  K  V  R  Q  R  T  V  T  I  *  R  V  C  F  S  V  F  *  S  V  F  D  *  V  E  L  I  L  L  M  L  S  C  I  Q  F  M  Q  H  C  F  S   </first_frame>
            <second_frame>  E  T  K  P  K  L  A  V  *  D  *  N  L  G  I  V  N  L  D  K  P  *  I  G  I  D  R  F  S  I  H  L  R  K  I  Q  A  Q  F  L  Q  *  R  P  N  S  L  H  F  L  S  H  P  L  *  T  R  C  N  F  A  G  S  T  P  L  *  R  I  L  T  A  T  H  F  S  Y  I  E  I  S  Q  T  L  L  L  F  S  T  L  T  H  S  F  S  L  H  K  E  S  *  K  T  G  F  K  G  Q  F  V  C  R  N  V  L  S  H  H  F  L  L  W  Q  K  E  E  D  P  L  M  C  L  Y  H  P  Q  K  L  L  I  R  R  N  C  I  E  H  L  R  L  R  W  G  R  S  L  V  Q  S  H  W  H  R  S  L  I  L  *  L  L  W  L  V  V  Q  V  G  L  V  K  M  L  *  L  K  G  L  E  K  L  G  R  I  F  I  L  L  L  L  Q  R  Q  G  G  K  G  R  V  R  L  M  E  K  I  T  F  L  R  V  K  K  S  F  C  Q  *  L  R  D  M  S  C  W  S  M  H  W  C  M  G  I  I  R  V  Y  Q  S  N  K  L  G  I  I  W  L  K  D  W  I  L  C  *  E  L  I  Y  K  V  Q  Q  H  *  G  G  F  *  E  I  L  Q  C  L  C  S  W  W  R  R  V  K  M  H  W  L  R  G  *  L  I  G  R  L  R  L  K  R  L  C  *  *  E  L  Q  R  L  E  R  K  *  G  I  W  G  S  L  I  M  W  *  *  I  E  K  E  S  W  R  I  L  L  S  *  W  S  L  L  L  M  L  R  K  L  K  *  G  K  E  Q  *  Q  F  R  E  S  V  F  Q  F  F  D  L  F  L  I  K  L  S  *  Y  S  *  C  C  L  V  F  N  L  C  N  I  V  F  P  </second_frame>
            <third_frame>   K  R  S  Q  S  L  Q  Y  K  I  E  I  W  E  L  *  I  W  I  N  P  R  L  E  S  I  D  S  L  S  I  Y  V  K  F  K  L  N  F  Y  S  N  A  Q  I  H  C  I  F  S  L  I  P  Y  K  L  D  A  I  S  Q  V  L  H  L  S  S  E  F  *  P  Q  P  I  S  P  I  S  K  S  H  K  P  F  C  C  F  R  P  *  P  T  V  S  L  Y  T  K  N  L  E  K  L  G  S  K  A  N  S  C  V  E  T  F  C  L  I  I  S  C  Y  G  R  R  K  K  T  H  S  C  A  Y  T  T  P  R  N  C  *  *  G  G  I  V  S  S  T  *  G  C  G  G  V  A  V  *  F  R  A  I  G  T  G  A  S  S  F  D  Y  C  G  *  W  S  K  W  G  W  *  R  C  C  D  *  K  A  *  R  S  *  G  E  Y  S  F  C  C  Y  C  N  D  K  G  E  K  A  G  *  G  *  W  K  R  L  L  F  Y  E  *  R  R  V  F  V  N  D  *  E  T  *  V  V  G  V  C  I  G  V  W  G  L  *  G  Y  T  K  A  T  N  *  G  S  Y  G  *  R  I  G  Y  C  V  E  S  *  Y  T  R  C  S  N  T  E  E  D  F  E  K  F  C  S  V  C  V  L  G  G  G  E  *  R  C  I  G  *  E  V  D  *  *  E  D  *  D  *  R  D  F  A  S  E  N  C  N  V  S  R  G  S  E  A  Y  G  G  V  *  L  C  G  S  E  *  R  R  R  V  G  E  F  C  *  V  N  G  V  Y  Y  *  C  *  E  S  *  S  E  A  K  N  S  D  N  L  E  S  L  F  F  S  F  L  I  C  F  *  L  S  *  A  D  T  L  N  V  V  L  Y  S  I  Y  A  T  L  F  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28393" stop="29376"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>981</number_coding_nucleotides>
                  <number_encoded_amino_acids>327</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NSSSISTVTPKFTAFSLSSPINSMQFRRFYTSLANSNRNPFLLYRNLTNPFAVFDPNPQFLSTQRILKNWVQRPIRVSKRFVSSFPAMAEGRRPTHVPIPPPETADKAELYRALEAAVGSQFSSEPLAPEPHPLIIVVSGPSGVGKDAVIKRLREVRENIHFVVTATTRGKRPGEVDGKDYFFTSKEEFLSMIERHELLEYALVYGDYKGIPKQQIRDHMAKGLDIVLRVDIQGAATLRRILRNSAVFVFLVAESEDALVKRLIDRKTETKETLLVRIATSREEVRHMGEFDYVVVNREGELENSVKLMESIIDAEKAKVRQRTVTI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="29558" PGL_stop="28916"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29558" e_stop="28916"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="29558" e_stop="28916" e_length="643"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29558" stop="28916"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E414255" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAACAACTATGTCATCGATCAAAGGCAAGAAGTAACATCTCATCTACTTTAACCAACCAAGAGCTCGACACGGTTAACACAAGTAGGAAAAACAATGTTGCATAAATTGAATACAAGACAACATTAAGAGTATCAGCTCAACTTAATCAAAAACAGATCAAAAAACTGAAAAACAGACTCTCTAAATTGTCACTGTTCTTTGCCTCACTTTAGCTTTCTCAGCATCAATAATAGACTCCATTAACTTAACAGAATTCTCCAACTCTCCTTCTCTATTCACTACCACATAATCAAACTCCCCCATATGCCTCACTTCCTCTCGAGACGTTGCAATTCTCACTAGCAAAGTCTCTTTAGTCTCAGTCTTCCTATCAATCAACCTCTTAACCAATGCATCTTCACTCTCCGCCACCAAGAACACAAACACTGCAGAATTTCTCAAAATCCTCCTCAGTGTTGCTGCACCTTGTATATCAACTCTCAACACAATATCCAATCCTTTAGCCATATGATCCCTAATTTGTTGCTTTGGTATACCCTTATAATCCCCATACACCAATGCATACTCCAACAACTCATGTCTCTCAATCATTGACAAAAACTCTTCTTTACTCGTAAAAAAGTAATCTTTTCCATCAACCT</gDNA_template>
            <first_frame> K  T  T  M  S  S  I  K  G  K  K  *  H  L  I  Y  F  N  Q  P  R  A  R  H  G  *  H  K  *  E  K  Q  C  C  I  N  *  I  Q  D  N  I  K  S  I  S  S  T  *  S  K  T  D  Q  K  T  E  K  Q  T  L  *  I  V  T  V  L  C  L  T  L  A  F  S  A  S  I  I  D  S  I  N  L  T  E  F  S  N  S  P  S  L  F  T  T  T  *  S  N  S  P  I  C  L  T  S  S  R  D  V  A  I  L  T  S  K  V  S  L  V  S  V  F  L  S  I  N  L  L  T  N  A  S  S  L  S  A  T  K  N  T  N  T  A  E  F  L  K  I  L  L  S  V  A  A  P  C  I  S  T  L  N  T  I  S  N  P  L  A  I  *  S  L  I  C  C  F  G  I  P  L  *  S  P  Y  T  N  A  Y  S  N  N  S  C  L  S  I  I  D  K  N  S  S  L  L  V  K  K  *  S  F  P  S  T  </first_frame>
            <second_frame>  K  Q  L  C  H  R  S  K  A  R  S  N  I  S  S  T  L  T  N  Q  E  L  D  T  V  N  T  S  R  K  N  N  V  A  *  I  E  Y  K  T  T  L  R  V  S  A  Q  L  N  Q  K  Q  I  K  K  L  K  N  R  L  S  K  L  S  L  F  F  A  S  L  *  L  S  Q  H  Q  *  *  T  P  L  T  *  Q  N  S  P  T  L  L  L  Y  S  L  P  H  N  Q  T  P  P  Y  A  S  L  P  L  E  T  L  Q  F  S  L  A  K  S  L  *  S  Q  S  S  Y  Q  S  T  S  *  P  M  H  L  H  S  P  P  P  R  T  Q  T  L  Q  N  F  S  K  S  S  S  V  L  L  H  L  V  Y  Q  L  S  T  Q  Y  P  I  L  *  P  Y  D  P  *  F  V  A  L  V  Y  P  Y  N  P  H  T  P  M  H  T  P  T  T  H  V  S  Q  S  L  T  K  T  L  L  Y  S  *  K  S  N  L  F  H  Q  P </second_frame>
            <third_frame>   N  N  Y  V  I  D  Q  R  Q  E  V  T  S  H  L  L  *  P  T  K  S  S  T  R  L  T  Q  V  G  K  T  M  L  H  K  L  N  T  R  Q  H  *  E  Y  Q  L  N  L  I  K  N  R  S  K  N  *  K  T  D  S  L  N  C  H  C  S  L  P  H  F  S  F  L  S  I  N  N  R  L  H  *  L  N  R  I  L  Q  L  S  F  S  I  H  Y  H  I  I  K  L  P  H  M  P  H  F  L  S  R  R  C  N  S  H  *  Q  S  L  F  S  L  S  L  P  I  N  Q  P  L  N  Q  C  I  F  T  L  R  H  Q  E  H  K  H  C  R  I  S  Q  N  P  P  Q  C  C  C  T  L  Y  I  N  S  Q  H  N  I  Q  S  F  S  H  M  I  P  N  L  L  L  W  Y  T  L  I  I  P  I  H  Q  C  I  L  Q  Q  L  M  S  L  N  H  *  Q  K  L  F  F  T  R  K  K  V  I  F  S  I  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29214" stop="28963"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QSLFSLSLPINQPLNQCIFTLRHQEHKHCRISQNPPQCCCTLYINSQHNIQSFSHMIPNLLLWYTLIIPIHQCILQQLMSLNH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29267" stop="29046"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SNSPICLTSSRDVAILTSKVSLVSVFLSINLLTNASSLSATKNTNTAEFLKILLSVAAPCISTLNTISNPLAI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="34112" PGL_stop="38782"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34112" e_stop="34285"/>
            <exon e_start="38343" e_stop="38782"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="34112" e_stop="34285" e_length="174"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.998">
            <gDNA_intron_boundary i_start="34286" i_stop="38342" i_length="4057"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="38343" e_stop="38782" e_length="440"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34112" stop="34285"/>
              <exon start="38343" stop="38596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E733394" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34114" stop="34285"/>
              <exon start="38343" stop="38670"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E308770" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34117" stop="34285"/>
              <exon start="38343" stop="38782"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34117" stop="34285"/>
              <exon start="38343" stop="38672"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E618993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34126" stop="34285"/>
              <exon start="38343" stop="38722"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424167" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34126" stop="34285"/>
              <exon start="38343" stop="38717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E451828" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34126" stop="34285"/>
              <exon start="38343" stop="38717"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424166" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34126" stop="34285"/>
              <exon start="38343" stop="38590"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E588916" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34131" stop="34285"/>
              <exon start="38343" stop="38596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540401" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34131" stop="34285"/>
              <exon start="38343" stop="38596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E540403" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34132" stop="34285"/>
              <exon start="38343" stop="38596"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288330" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34144" stop="34285"/>
              <exon start="38343" stop="38552"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E722708" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34193" stop="34285"/>
              <exon start="38343" stop="38662"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E218343" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34225" stop="34285"/>
              <exon start="38343" stop="38580"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E234065" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGAAGAAGAAAGAGTTTACTCCAATGGCGTCTGGATGGGGAATTACAGGGAATAAAGGACGATGCTATGATTTCTGGATGGATTTCAGTGAGTGTATGTCTCGATGCAGGGAGCCCAAGGACTGTGTACTTCTTAGAGAAGACTACTTCGAGTGTCTTCATCATTCCAAAGAG : TATCAACGTAGGAACCGAATCTACAAAGAGGAGCAGCGCCAATTGAGAGCTGCTTCACAAAAGAAAAAGGAAGGTGTAGATGGTGGTGGTGGTGGTCATCACTGACCTTTATTATTCTTGATCAATCATGGTTTTATCAACTAAAAGACATTGAAGTAAACTGTATGTGGTTTTGAATTTTGAAATAAAGAATTCTATCAGTTGCATTTGATGTGAGTTGCATCATTGAAATGACTCAGTTCAGTTTCTTTCTCATATGGCCTGGCCTTCGTTTTGTTGGTGATAAGGAACATATGTTTTAAGGGCACATTTACTTCTTACCATTGGCACTAGACCTATGATATCAGTTCTTTCTTTGAAATCTGTGACTCTTACGTGTAATATGAAATTCGCGATGGGAAGCCTGCATCATGATGAAAAGAGCTAGGATTTTGCTAAAT</gDNA_template>
            <first_frame> R  K  K  K  E  F  T  P  M  A  S  G  W  G  I  T  G  N  K  G  R  C  Y  D  F  W  M  D  F  S  E  C  M  S  R  C  R  E  P  K  D  C  V  L  L  R  E  D  Y  F  E  C  L  H  H  S  K  E  :  Y  Q  R  R  N  R  I  Y  K  E  E  Q  R  Q  L  R  A  A  S  Q  K  K  K  E  G  V  D  G  G  G  G  G  H  H  *  P  L  L  F  L  I  N  H  G  F  I  N  *  K  T  L  K  *  T  V  C  G  F  E  F  *  N  K  E  F  Y  Q  L  H  L  M  *  V  A  S  L  K  *  L  S  S  V  S  F  S  Y  G  L  A  F  V  L  L  V  I  R  N  I  C  F  K  G  T  F  T  S  Y  H  W  H  *  T  Y  D  I  S  S  F  F  E  I  C  D  S  Y  V  *  Y  E  I  R  D  G  K  P  A  S  *  *  K  E  L  G  F  C  *   </first_frame>
            <second_frame>  G  R  R  K  S  L  L  Q  W  R  L  D  G  E  L  Q  G  I  K  D  D  A  M  I  S  G  W  I  S  V  S  V  C  L  D  A  G  S  P  R  T  V  Y  F  L  E  K  T  T  S  S  V  F  I  I  P  K  S :   I  N  V  G  T  E  S  T  K  R  S  S  A  N  *  E  L  L  H  K  R  K  R  K  V  *  M  V  V  V  V  V  I  T  D  L  Y  Y  S  *  S  I  M  V  L  S  T  K  R  H  *  S  K  L  Y  V  V  L  N  F  E  I  K  N  S  I  S  C  I  *  C  E  L  H  H  *  N  D  S  V  Q  F  L  S  H  M  A  W  P  S  F  C  W  *  *  G  T  Y  V  L  R  A  H  L  L  L  T  I  G  T  R  P  M  I  S  V  L  S  L  K  S  V  T  L  T  C  N  M  K  F  A  M  G  S  L  H  H  D  E  K  S  *  D  F  A  K  </second_frame>
            <third_frame>   E  E  E  R  V  Y  S  N  G  V  W  M  G  N  Y  R  E  *  R  T  M  L  *  F  L  D  G  F  Q  *  V  Y  V  S  M  Q  G  A  Q  G  L  C  T  S  *  R  R  L  L  R  V  S  S  S  F  Q  R   : V  S  T  *  E  P  N  L  Q  R  G  A  A  P  I  E  S  C  F  T  K  E  K  G  R  C  R  W  W  W  W  W  S  S  L  T  F  I  I  L  D  Q  S  W  F  Y  Q  L  K  D  I  E  V  N  C  M  W  F  *  I  L  K  *  R  I  L  S  V  A  F  D  V  S  C  I  I  E  M  T  Q  F  S  F  F  L  I  W  P  G  L  R  F  V  G  D  K  E  H  M  F  *  G  H  I  Y  F  L  P  L  A  L  D  L  *  Y  Q  F  F  L  *  N  L  *  L  L  R  V  I  *  N  S  R  W  E  A  C  I  M  M  K  R  A  R  I  L  L  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34112" stop="34285"/>
                    <exon start="38343" stop="38447"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>276</number_coding_nucleotides>
                  <number_encoded_amino_acids>92</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKKKEFTPMASGWGITGNKGRCYDFWMDFSECMSRCREPKDCVLLREDYFECLHHSKEYQRRNRIYKEEQRQLRAASQKKKEGVDGGGGGHH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="34113" stop="34285"/>
                    <exon start="38343" stop="38388"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GRRKSLLQWRLDGELQGIKDDAMISGWISVSVCLDAGSPRTVYFLEKTTSSVFIIPKSINVGTESTKRSSAN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="40813" PGL_stop="47536"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40813" e_stop="41123"/>
            <exon e_start="41552" e_stop="41630"/>
            <exon e_start="42031" e_stop="42098"/>
            <exon e_start="44673" e_stop="44761"/>
            <exon e_start="45241" e_stop="45407"/>
            <exon e_start="47511" e_stop="47536"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.839" e_score="0.865"/>
          <exon-intron don_prob="0.988" acc_prob="0.471" e_score="1.000"/>
          <exon-intron don_prob="0.928" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.648" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="0.982"/>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.865">
            <gDNA_exon_boundary e_start="40813" e_stop="41123" e_length="311"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.839">
            <gDNA_intron_boundary i_start="41124" i_stop="41551" i_length="428"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41552" e_stop="41630" e_length="79"/>
          </exon>
          <intron i_serial="2" don_prob="0.988" acc_prob="0.471">
            <gDNA_intron_boundary i_start="41631" i_stop="42030" i_length="400"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="42031" e_stop="42098" e_length="68"/>
          </exon>
          <intron i_serial="3" don_prob="0.928" acc_prob="1.000">
            <gDNA_intron_boundary i_start="42099" i_stop="44672" i_length="2574"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="44673" e_stop="44761" e_length="89"/>
          </exon>
          <intron i_serial="4" don_prob="0.992" acc_prob="0.648">
            <gDNA_intron_boundary i_start="44762" i_stop="45240" i_length="479"/>
          </intron>
          <exon e_serial="5" e_score="0.982">
            <gDNA_exon_boundary e_start="45241" e_stop="45407" e_length="167"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="45408" i_stop="47510" i_length="2103"/>
          </intron>
          <exon e_serial="6" e_score="0.962">
            <gDNA_exon_boundary e_start="47511" e_stop="47536" e_length="26"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40813" stop="41123"/>
              <exon start="41552" stop="41630"/>
              <exon start="42031" stop="42098"/>
              <exon start="44673" stop="44761"/>
              <exon start="45241" stop="45407"/>
              <exon start="47511" stop="47536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E485952" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40848" stop="41123"/>
              <exon start="41552" stop="41630"/>
              <exon start="42031" stop="42098"/>
              <exon start="44673" stop="44761"/>
              <exon start="45241" stop="45257"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E252889" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTGTAACCCAAATCAAATCAACAAATTCTCCCAAAATTCGACTCTCTGAACTCTGAAGCATCGAAAATTGTGTAATTTTGTAGCCATTGATGAGTCGAGGAGTGTGAAATTTTGTATAAGAAATGGGGAACAGAGGCCATACTCAGTACAGAACGACAAGGAGGACATCCAATTTCTCAATTACTCTCTACATTTTCCTCTTTTTTGTTTTGTCAATGTTCGTATTCTTTTATTACACTAAGGATATCGTAGAAGATGAACAAAAGCTTGTCTTGGCATCGGAGAAGAAGGAAGAGCCTGAATTCGATGAG : AATGAAGATAATTCTGTTTGGGAAGCTTCAAAGAGCCATGGTTTACATCCATGCATTAAGCCAACTGCAAAATACAAAG : CTGCTCTAGGGTGGAAACGCTACTTGACTGTAAAAAGTAATGGTGGATTAAATCAAATGAGGACGGGT : ATAGCTGACATGGTGGCAGTGGCACATGTGATGAATGCAACTTTGGTAATTCCTCAATTGGACAAGCGTTCATTCTGGCAAGATTCAAG : ATATATTTGATGAGAACCATTTCATCAAAGCATTAAGAGGAGACCTCATGATTATTAAAGAGCTTCCTAAAGAAATAGAATCTTTACCTCGAGCTAGGAAGCACTTCACGTCATGGTCAGGAGTGGGTTACTATGAAGAAATGACTCAATTGTGGAAGGAGCATCAG : GTCATTCATGTTGCTAAATCTGATTC</gDNA_template>
            <first_frame> L  *  P  K  S  N  Q  Q  I  L  P  K  F  D  S  L  N  S  E  A  S  K  I  V  *  F  C  S  H  *  *  V  E  E  C  E  I  L  Y  K  K  W  G  T  E  A  I  L  S  T  E  R  Q  G  G  H  P  I  S  Q  L  L  S  T  F  S  S  F  L  F  C  Q  C  S  Y  S  F  I  T  L  R  I  S  *  K  M  N  K  S  L  S  W  H  R  R  R  R  K  S  L  N  S  M  R :   M  K  I  I  L  F  G  K  L  Q  R  A  M  V  Y  I  H  A  L  S  Q  L  Q  N  T  K  :  L  L  *  G  G  N  A  T  *  L  *  K  V  M  V  D  *  I  K  *  G  R  V :   *  L  T  W  W  Q  W  H  M  *  *  M  Q  L  W  *  F  L  N  W  T  S  V  H  S  G  K  I  Q   : D  I  F  D  E  N  H  F  I  K  A  L  R  G  D  L  M  I  I  K  E  L  P  K  E  I  E  S  L  P  R  A  R  K  H  F  T  S  W  S  G  V  G  Y  Y  E  E  M  T  Q  L  W  K  E  H  Q  :  V  I  H  V  A  K  S  D   </first_frame>
            <second_frame>  C  N  P  N  Q  I  N  K  F  S  Q  N  S  T  L  *  T  L  K  H  R  K  L  C  N  F  V  A  I  D  E  S  R  S  V  K  F  C  I  R  N  G  E  Q  R  P  Y  S  V  Q  N  D  K  E  D  I  Q  F  L  N  Y  S  L  H  F  P  L  F  C  F  V  N  V  R  I  L  L  L  H  *  G  Y  R  R  R  *  T  K  A  C  L  G  I  G  E  E  G  R  A  *  I  R  *   : E  *  R  *  F  C  L  G  S  F  K  E  P  W  F  T  S  M  H  *  A  N  C  K  I  Q  S :   C  S  R  V  E  T  L  L  D  C  K  K  *  W  W  I  K  S  N  E  D  G   : Y  S  *  H  G  G  S  G  T  C  D  E  C  N  F  G  N  S  S  I  G  Q  A  F  I  L  A  R  F  K  :  I  Y  L  M  R  T  I  S  S  K  H  *  E  E  T  S  *  L  L  K  S  F  L  K  K  *  N  L  Y  L  E  L  G  S  T  S  R  H  G  Q  E  W  V  T  M  K  K  *  L  N  C  G  R  S  I  R :   S  F  M  L  L  N  L  I  </second_frame>
            <third_frame>   V  T  Q  I  K  S  T  N  S  P  K  I  R  L  S  E  L  *  S  I  E  N  C  V  I  L  *  P  L  M  S  R  G  V  *  N  F  V  *  E  M  G  N  R  G  H  T  Q  Y  R  T  T  R  R  T  S  N  F  S  I  T  L  Y  I  F  L  F  F  V  L  S  M  F  V  F  F  Y  Y  T  K  D  I  V  E  D  E  Q  K  L  V  L  A  S  E  K  K  E  E  P  E  F  D  E  :  N  E  D  N  S  V  W  E  A  S  K  S  H  G  L  H  P  C  I  K  P  T  A  K  Y  K   : A  A  L  G  W  K  R  Y  L  T  V  K  S  N  G  G  L  N  Q  M  R  T  G  :  I  A  D  M  V  A  V  A  H  V  M  N  A  T  L  V  I  P  Q  L  D  K  R  S  F  W  Q  D  S  R :   Y  I  *  *  E  P  F  H  Q  S  I  K  R  R  P  H  D  Y  *  R  A  S  *  R  N  R  I  F  T  S  S  *  E  A  L  H  V  M  V  R  S  G  L  L  *  R  N  D  S  I  V  E  G  A  S   : G  H  S  C  C  *  I  *  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40932" stop="41123"/>
                    <exon start="41552" stop="41630"/>
                    <exon start="42031" stop="42098"/>
                    <exon start="44673" stop="44761"/>
                    <exon start="45241" stop="45250"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>435</number_coding_nucleotides>
                  <number_encoded_amino_acids>145</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EMGNRGHTQYRTTRRTSNFSITLYIFLFFVLSMFVFFYYTKDIVEDEQKLVLASEKKEEPEFDENEDNSVWEASKSHGLHPCIKPTAKYKAALGWKRYLTVKSNGGLNQMRTGIADMVAVAHVMNATLVIPQLDKRSFWQDSRYI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="67171" PGL_stop="66377"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67171" e_stop="66377"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.920"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.920">
            <gDNA_exon_boundary e_start="67171" e_stop="66377" e_length="795"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67171" stop="66431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E707410" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67112" stop="66377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E355122" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67112" stop="66417"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350936" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67112" stop="66418"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E353644" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGATTTGATAAGGGTGCCACCTCACGAACTCAATGCTATGAGTTCACCTTGGCCATTTGTAGCTTGGGGAATGGATGTCATCGGTCCTATAGAACCGGCCGCTTCCAATGGACACAGATTTATTTTGGTTGCCATCGATTATTTCACCAAATGGGTGGAAGCAGCCTCTTACAAATCGGTAACCAAGAAAGTGGTGGCCGACTTTGTCCGCAACAATTTGATCTGCCGATTTGGAGTTCCAGAATCCATCATCACTGATAATGGTGCAAATCTCAACAGTCATCTGATGAAAGAGATATGTGAACAATTTAAGATTATCCACCGAAGGTCAACTGCTTATCTCCCTCAAATGAACGGAGCTGTAGAGGCCGCCAACAAGAACATCAAGAAGATTCTGAGGAAAATGATTGACAAGCAGCGGGGTTGGCATGAAATGTTGCCATATGCTCTACTGGGTTATCGAACGACGGTCAGAACATCAACTGGGGCTACTCCATACTTGCTAGTATACGGAACAGAAGCAGTCGTACCTGTCGAAGTCGAGATACCGTCACTGAGGATCATCCAAGAAGCCGAGCTAAGTAATGCTGAGTGGGTTAGCAAACGGATTGATCAACTAGCCTTGATTGATGAAAAGAGGATGGTTGCTGTTTGTCATGGCCAGTTGTATAGACAAAGAATGACTCGCGCTTTTCACAAAAGAGTAAGAGCCAGAAATTTTGAAGTTGGTCAGTTGGTTCTTAAGCGTATTTTTCCTCATCAAGACGAGTACAAAGGAAAGTTCGCACCAAACTG</gDNA_template>
            <first_frame> R  F  D  K  G  A  T  S  R  T  Q  C  Y  E  F  T  L  A  I  C  S  L  G  N  G  C  H  R  S  Y  R  T  G  R  F  Q  W  T  Q  I  Y  F  G  C  H  R  L  F  H  Q  M  G  G  S  S  L  L  Q  I  G  N  Q  E  S  G  G  R  L  C  P  Q  Q  F  D  L  P  I  W  S  S  R  I  H  H  H  *  *  W  C  K  S  Q  Q  S  S  D  E  R  D  M  *  T  I  *  D  Y  P  P  K  V  N  C  L  S  P  S  N  E  R  S  C  R  G  R  Q  Q  E  H  Q  E  D  S  E  E  N  D  *  Q  A  A  G  L  A  *  N  V  A  I  C  S  T  G  L  S  N  D  G  Q  N  I  N  W  G  Y  S  I  L  A  S  I  R  N  R  S  S  R  T  C  R  S  R  D  T  V  T  E  D  H  P  R  S  R  A  K  *  C  *  V  G  *  Q  T  D  *  S  T  S  L  D  *  *  K  E  D  G  C  C  L  S  W  P  V  V  *  T  K  N  D  S  R  F  S  Q  K  S  K  S  Q  K  F  *  S  W  S  V  G  S  *  A  Y  F  S  S  S  R  R  V  Q  R  K  V  R  T  K  L </first_frame>
            <second_frame>  D  L  I  R  V  P  P  H  E  L  N  A  M  S  S  P  W  P  F  V  A  W  G  M  D  V  I  G  P  I  E  P  A  A  S  N  G  H  R  F  I  L  V  A  I  D  Y  F  T  K  W  V  E  A  A  S  Y  K  S  V  T  K  K  V  V  A  D  F  V  R  N  N  L  I  C  R  F  G  V  P  E  S  I  I  T  D  N  G  A  N  L  N  S  H  L  M  K  E  I  C  E  Q  F  K  I  I  H  R  R  S  T  A  Y  L  P  Q  M  N  G  A  V  E  A  A  N  K  N  I  K  K  I  L  R  K  M  I  D  K  Q  R  G  W  H  E  M  L  P  Y  A  L  L  G  Y  R  T  T  V  R  T  S  T  G  A  T  P  Y  L  L  V  Y  G  T  E  A  V  V  P  V  E  V  E  I  P  S  L  R  I  I  Q  E  A  E  L  S  N  A  E  W  V  S  K  R  I  D  Q  L  A  L  I  D  E  K  R  M  V  A  V  C  H  G  Q  L  Y  R  Q  R  M  T  R  A  F  H  K  R  V  R  A  R  N  F  E  V  G  Q  L  V  L  K  R  I  F  P  H  Q  D  E  Y  K  G  K  F  A  P  N   </second_frame>
            <third_frame>   I  *  *  G  C  H  L  T  N  S  M  L  *  V  H  L  G  H  L  *  L  G  E  W  M  S  S  V  L  *  N  R  P  L  P  M  D  T  D  L  F  W  L  P  S  I  I  S  P  N  G  W  K  Q  P  L  T  N  R  *  P  R  K  W  W  P  T  L  S  A  T  I  *  S  A  D  L  E  F  Q  N  P  S  S  L  I  M  V  Q  I  S  T  V  I  *  *  K  R  Y  V  N  N  L  R  L  S  T  E  G  Q  L  L  I  S  L  K  *  T  E  L  *  R  P  P  T  R  T  S  R  R  F  *  G  K  *  L  T  S  S  G  V  G  M  K  C  C  H  M  L  Y  W  V  I  E  R  R  S  E  H  Q  L  G  L  L  H  T  C  *  Y  T  E  Q  K  Q  S  Y  L  S  K  S  R  Y  R  H  *  G  S  S  K  K  P  S  *  V  M  L  S  G  L  A  N  G  L  I  N  *  P  *  L  M  K  R  G  W  L  L  F  V  M  A  S  C  I  D  K  E  *  L  A  L  F  T  K  E  *  E  P  E  I  L  K  L  V  S  W  F  L  S  V  F  F  L  I  K  T  S  T  K  E  S  S  H  Q  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67170" stop="66379"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLIRVPPHELNAMSSPWPFVAWGMDVIGPIEPAASNGHRFILVAIDYFTKWVEAASYKSVTKKVVADFVRNNLICRFGVPESIITDNGANLNSHLMKEICEQFKIIHRRSTAYLPQMNGAVEAANKNIKKILRKMIDKQRGWHEMLPYALLGYRTTVRTSTGATPYLLVYGTEAVVPVEVEIPSLRIIQEAELSNAEWVSKRIDQLALIDEKRMVAVCHGQLYRQRMTRAFHKRVRARNFEVGQLVLKRIFPHQDEYKGKFAPN</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="73263" PGL_stop="73797"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="73263" e_stop="73797"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.970"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="73263" e_stop="73797" e_length="535"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="73263" stop="73797"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243204" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGGCTGGTTCTGAGTTGGACCTATGTTTGATGAAGGGAAGTAGACGGGAGGTCTTGCATCAGCAGTATTAGTACCAAATCCAGGTGGAGGCGCATCCTGTCTCCGTTGCATTTCAACTTTCATTTCAGCAATCTGTTGCATCAGCTGCATGATCAATTCGTTCTGTTCCACTACAGTGGGCTGAGCCACCACAACGTCAGTAAGACGCCCTTCGTCATTGTTGTCTCCCATAACTGTTTTTCCTTTGTCTGAATTTGATCGAGGGAAGGAATCTGTAGGACCTTTCGATCTGGTGAAGTAAGGATGATCTGCCAGCTTTATTGACACAGATCAGTAAAAGGTACCTGAGATGTAAAAACAACTCAAAGGCAAATTTGTTAGTGCATATCCAGAGTACAAAATGCATAATATCGCACATAAAACAGATAAACACACAAGTCATTTTGTTTGAGGATATCTTAACCCACGAATAAGGACGGATATATATTTTGAACAAACAAGAATTTGTTTGTTTGGCGCTATCTTGGGAAATCTG</gDNA_template>
            <first_frame> R  L  V  L  S  W  T  Y  V  *  *  R  E  V  D  G  R  S  C  I  S  S  I  S  T  K  S  R  W  R  R  I  L  S  P  L  H  F  N  F  H  F  S  N  L  L  H  Q  L  H  D  Q  F  V  L  F  H  Y  S  G  L  S  H  H  N  V  S  K  T  P  F  V  I  V  V  S  H  N  C  F  S  F  V  *  I  *  S  R  E  G  I  C  R  T  F  R  S  G  E  V  R  M  I  C  Q  L  Y  *  H  R  S  V  K  G  T  *  D  V  K  T  T  Q  R  Q  I  C  *  C  I  S  R  V  Q  N  A  *  Y  R  T  *  N  R  *  T  H  K  S  F  C  L  R  I  S  *  P  T  N  K  D  G  Y  I  F  *  T  N  K  N  L  F  V  W  R  Y  L  G  K  S  </first_frame>
            <second_frame>  G  W  F  *  V  G  P  M  F  D  E  G  K  *  T  G  G  L  A  S  A  V  L  V  P  N  P  G  G  G  A  S  C  L  R  C  I  S  T  F  I  S  A  I  C  C  I  S  C  M  I  N  S  F  C  S  T  T  V  G  *  A  T  T  T  S  V  R  R  P  S  S  L  L  S  P  I  T  V  F  P  L  S  E  F  D  R  G  K  E  S  V  G  P  F  D  L  V  K  *  G  *  S  A  S  F  I  D  T  D  Q  *  K  V  P  E  M  *  K  Q  L  K  G  K  F  V  S  A  Y  P  E  Y  K  M  H  N  I  A  H  K  T  D  K  H  T  S  H  F  V  *  G  Y  L  N  P  R  I  R  T  D  I  Y  F  E  Q  T  R  I  C  L  F  G  A  I  L  G  N  L </second_frame>
            <third_frame>   A  G  S  E  L  D  L  C  L  M  K  G  S  R  R  E  V  L  H  Q  Q  Y  *  Y  Q  I  Q  V  E  A  H  P  V  S  V  A  F  Q  L  S  F  Q  Q  S  V  A  S  A  A  *  S  I  R  S  V  P  L  Q  W  A  E  P  P  Q  R  Q  *  D  A  L  R  H  C  C  L  P  *  L  F  F  L  C  L  N  L  I  E  G  R  N  L  *  D  L  S  I  W  *  S  K  D  D  L  P  A  L  L  T  Q  I  S  K  R  Y  L  R  C  K  N  N  S  K  A  N  L  L  V  H  I  Q  S  T  K  C  I  I  S  H  I  K  Q  I  N  T  Q  V  I  L  F  E  D  I  L  T  H  E  *  G  R  I  Y  I  L  N  K  Q  E  F  V  C  L  A  L  S  W  E  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="73296" stop="73514"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REVDGRSCISSISTKSRWRRILSPLHFNFHFSNLLHQLHDQFVLFHYSGLSHHNVSKTPFVIVVSHNCFSFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="74101" PGL_stop="74486"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="74101" e_stop="74486"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="74101" e_stop="74486" e_length="386"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="74101" stop="74486"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E577849" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAAAATGGAGGCTTGTAGACGATTTCTTCTTCATCATCCTGCTCAGTCACTTCACGGTCGGGGCCACTGTTATCTGCTCCCAGATCATGGGCGAGGTATTTTCCGCCCTTTGGGTCGCTATGGGTCGCCAATTCCTCGTCGAGCGCCGCGTTTCTGCCCAACAACACAGCAGTCTCGATATCTATCTTCGCCTCTCTCGCCTTTCCTTCGTGTATCTCCAAACGAAGCAAGTTCAACCTTTTCCTTAGGCTTACGGTTTCCATCTCAACCTCCTTCTTTCTCTTTATCTGTGACGCCAGATCTTCATCCAAGGTTGTGACCGCAGCTTTGTAGATCGCCGTGGTCGCGTCTACTTTGAGTCCTTCCTCCTTAACCCTCTGAATCT</gDNA_template>
            <first_frame> R  K  W  R  L  V  D  D  F  F  F  I  I  L  L  S  H  F  T  V  G  A  T  V  I  C  S  Q  I  M  G  E  V  F  S  A  L  W  V  A  M  G  R  Q  F  L  V  E  R  R  V  S  A  Q  Q  H  S  S  L  D  I  Y  L  R  L  S  R  L  S  F  V  Y  L  Q  T  K  Q  V  Q  P  F  P  *  A  Y  G  F  H  L  N  L  L  L  S  L  Y  L  *  R  Q  I  F  I  Q  G  C  D  R  S  F  V  D  R  R  G  R  V  Y  F  E  S  F  L  L  N  P  L  N   </first_frame>
            <second_frame>  E  N  G  G  L  *  T  I  S  S  S  S  S  C  S  V  T  S  R  S  G  P  L  L  S  A  P  R  S  W  A  R  Y  F  P  P  F  G  S  L  W  V  A  N  S  S  S  S  A  A  F  L  P  N  N  T  A  V  S  I  S  I  F  A  S  L  A  F  P  S  C  I  S  K  R  S  K  F  N  L  F  L  R  L  T  V  S  I  S  T  S  F  F  L  F  I  C  D  A  R  S  S  S  K  V  V  T  A  A  L  *  I  A  V  V  A  S  T  L  S  P  S  S  L  T  L  *  I  </second_frame>
            <third_frame>   K  M  E  A  C  R  R  F  L  L  H  H  P  A  Q  S  L  H  G  R  G  H  C  Y  L  L  P  D  H  G  R  G  I  F  R  P  L  G  R  Y  G  S  P  I  P  R  R  A  P  R  F  C  P  T  T  Q  Q  S  R  Y  L  S  S  P  L  S  P  F  L  R  V  S  P  N  E  A  S  S  T  F  S  L  G  L  R  F  P  S  Q  P  P  S  F  S  L  S  V  T  P  D  L  H  P  R  L  *  P  Q  L  C  R  S  P  W  S  R  L  L  *  V  L  P  P  *  P  S  E  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74103" stop="74420"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>315</number_coding_nucleotides>
                  <number_encoded_amino_acids>105</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMEACRRFLLHHPAQSLHGRGHCYLLPDHGRGIFRPLGRYGSPIPRRAPRFCPTTQQSRYLSSPLSPFLRVSPNEASSTFSLGLRFPSQPPSFSLSVTPDLHPRL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74120" stop="74434"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>312</number_coding_nucleotides>
                  <number_encoded_amino_acids>104</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TISSSSSCSVTSRSGPLLSAPRSWARYFPPFGSLWVANSSSSAAFLPNNTAVSISIFASLAFPSCISKRSKFNLFLRLTVSISTSFFLFICDARSSSKVVTAAL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="74101" stop="74349"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>246</number_coding_nucleotides>
                  <number_encoded_amino_acids>82</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKWRLVDDFFFIILLSHFTVGATVICSQIMGEVFSALWVAMGRQFLVERRVSAQQHSSLDIYLRLSRLSFVYLQTKQVQPFP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="86274" PGL_stop="86779"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86274" e_stop="86602"/>
            <exon e_start="86697" e_stop="86779"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.967" acc_prob="0.988" e_score="0.982"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="86274" e_stop="86602" e_length="329"/>
          </exon>
          <intron i_serial="1" don_prob="0.967" acc_prob="0.988">
            <gDNA_intron_boundary i_start="86603" i_stop="86696" i_length="94"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="86697" e_stop="86779" e_length="83"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86274" stop="86602"/>
              <exon start="86697" stop="86779"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335987" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GGAATTTGAACAACCAATGTTTAGAGAACACCACAACACTAAGAAATATAACCATAGTAGTTCTATTAGTAGTACTGTTTCCTCTGTTGCTTCACATGAAGATTTGAGAAGTAGAATTGAATCATTTCATGTTAGGGAAAAAGCTATTTCCAAAACTGAATCTGCTGAAAAAAAACTTTCATGGTTACGTTCACAGATTATTGGTGAAAATGTCGATTTCGATTCGCCTTTTGGGAAACGTAGGCTTACTTATGCTGATCATACTGCCTCTGGAAGATCACTTCAATATATCGAAAATTATATCATCAATAACGTCCTTCCTTTCTATG : GTAATAGTCATACTAGTGACAGTCATGTGGGATATCAAACGACGAAAATAGTGCATGAAGCAGCAGCTTATGTGAAGAAATGC</gDNA_template>
            <first_frame> G  I  *  T  T  N  V  *  R  T  P  Q  H  *  E  I  *  P  *  *  F  Y  *  *  Y  C  F  L  C  C  F  T  *  R  F  E  K  *  N  *  I  I  S  C  *  G  K  S  Y  F  Q  N  *  I  C  *  K  K  T  F  M  V  T  F  T  D  Y  W  *  K  C  R  F  R  F  A  F  W  E  T  *  A  Y  L  C  *  S  Y  C  L  W  K  I  T  S  I  Y  R  K  L  Y  H  Q  *  R  P  S  F  L  W :   *  *  S  Y  *  *  Q  S  C  G  I  S  N  D  E  N  S  A  *  S  S  S  L  C  E  E  M  </first_frame>
            <second_frame>  E  F  E  Q  P  M  F  R  E  H  H  N  T  K  K  Y  N  H  S  S  S  I  S  S  T  V  S  S  V  A  S  H  E  D  L  R  S  R  I  E  S  F  H  V  R  E  K  A  I  S  K  T  E  S  A  E  K  K  L  S  W  L  R  S  Q  I  I  G  E  N  V  D  F  D  S  P  F  G  K  R  R  L  T  Y  A  D  H  T  A  S  G  R  S  L  Q  Y  I  E  N  Y  I  I  N  N  V  L  P  F  Y   : G  N  S  H  T  S  D  S  H  V  G  Y  Q  T  T  K  I  V  H  E  A  A  A  Y  V  K  K  C </second_frame>
            <third_frame>   N  L  N  N  Q  C  L  E  N  T  T  T  L  R  N  I  T  I  V  V  L  L  V  V  L  F  P  L  L  L  H  M  K  I  *  E  V  E  L  N  H  F  M  L  G  K  K  L  F  P  K  L  N  L  L  K  K  N  F  H  G  Y  V  H  R  L  L  V  K  M  S  I  S  I  R  L  L  G  N  V  G  L  L  M  L  I  I  L  P  L  E  D  H  F  N  I  S  K  I  I  S  S  I  T  S  F  L  S  M  :  V  I  V  I  L  V  T  V  M  W  D  I  K  R  R  K  *  C  M  K  Q  Q  L  M  *  R  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86275" stop="86602"/>
                    <exon start="86697" stop="86779"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>411</number_coding_nucleotides>
                  <number_encoded_amino_acids>137</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EFEQPMFREHHNTKKYNHSSSISSTVSSVASHEDLRSRIESFHVREKAISKTESAEKKLSWLRSQIIGENVDFDSPFGKRRLTYADHTASGRSLQYIENYIINNVLPFYGNSHTSDSHVGYQTTKIVHEAAAYVKKC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="86997" PGL_stop="87727"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="86997" e_stop="87207"/>
            <exon e_start="87292" e_stop="87493"/>
            <exon e_start="87581" e_stop="87727"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="86997" e_stop="87207" e_length="211"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="0.999">
            <gDNA_intron_boundary i_start="87208" i_stop="87291" i_length="84"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="87292" e_stop="87493" e_length="202"/>
          </exon>
          <intron i_serial="2" don_prob="0.992" acc_prob="0.995">
            <gDNA_intron_boundary i_start="87494" i_stop="87580" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="87581" e_stop="87727" e_length="147"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86997" stop="87207"/>
              <exon start="87292" stop="87493"/>
              <exon start="87581" stop="87727"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86997" stop="87207"/>
              <exon start="87292" stop="87493"/>
              <exon start="87581" stop="87721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395496" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86998" stop="87207"/>
              <exon start="87292" stop="87493"/>
              <exon start="87581" stop="87721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205162" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAG : TGGTCCATATGCGAAAATAGAGATGAGATCAGGAGAGATCGATGGATATGATGCTGTTTTTATTAGTCCTCATAAATTTCTTGGAGGTCCAGGCACACCTGGAATTCTTGTAATGAACAAAGCACTCTATCGATTGAGGACTTCACCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCGTACAATGAAAAG : GACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGAACACACTTACATTGAA</gDNA_template>
            <first_frame> L  R  L  *  R  L  D  W  T  K  T  G  *  *  I  W  K  H  *  G  I  S  L  S  C  I  S  L  R  I  D  H  C  W  V  R  S  Q  L  V  V  M  L  L  G  L  I  L  I  Q  E  P  S  L  V  Y  F  I  K  M  E  L  L  L  A  L  I  S  Q  Q   : V  V  H  M  R  K  *  R  *  D  Q  E  R  S  M  D  M  M  L  F  L  L  V  L  I  N  F  L  E  V  Q  A  H  L  E  F  L  *  *  T  K  H  S  I  D  *  G  L  H  L  H  L  L  V  E  V  V  L  L  I  L  L  T  R  T  M  K  R :   T  H  F  M  W  R  I  L  K  K  G  K  T  L  V  H  R  Q  S  F  R  K  *  E  Q  H  L  H  F  G  *  K  S  S  *  V  I  K  *  L  K  E  W  N  T  L  T  L   </first_frame>
            <second_frame>  *  G  C  R  D  W  I  G  R  K  R  A  S  R  Y  G  S  I  E  G  S  A  *  V  V  *  V  Y  E  *  T  I  V  G  F  V  L  S  L  *  *  C  Y  W  D  L  F  *  Y  K  S  H  R  S  F  T  S  *  K  W  S  F  C  L  L  *  F  R  S  K  :  W  S  I  C  E  N  R  D  E  I  R  R  D  R  W  I  *  C  C  F  Y  *  S  S  *  I  S  W  R  S  R  H  T  W  N  S  C  N  E  Q  S  T  L  S  I  E  D  F  T  S  I  Y  L  W  R  W  Y  C  *  F  C  *  P  V  Q  *  K   : G  H  T  L  C  G  E  Y  *  R  K  G  R  R  W  Y  T  A  N  H  S  E  S  E  N  S  T  C  I  L  G  E  R  V  H  K  S  *  S  N  *  K  N  G  T  H  L  H  *  </second_frame>
            <third_frame>   E  V  V  E  I  G  L  D  E  N  G  L  V  D  M  E  A  L  R  D  Q  L  E  L  Y  K  S  T  N  R  P  L  L  G  S  F  S  A  C  S  N  V  T  G  T  Y  S  D  T  R  A  I  A  R  L  L  H  K  N  G  A  F  A  C  F  D  F  A  A  S :   G  P  Y  A  K  I  E  M  R  S  G  E  I  D  G  Y  D  A  V  F  I  S  P  H  K  F  L  G  G  P  G  T  P  G  I  L  V  M  N  K  A  L  Y  R  L  R  T  S  P  P  S  T  C  G  G  G  T  V  D  F  V  N  P  Y  N  E  K  :  D  T  L  Y  V  E  N  I  E  E  R  E  D  A  G  T  P  P  I  I  Q  K  V  R  T  A  L  A  F  W  V  K  E  F  I  S  H  K  V  I  E  R  M  E  H  T  Y  I  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86999" stop="87207"/>
                    <exon start="87292" stop="87493"/>
                    <exon start="87581" stop="87727"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EVVEIGLDENGLVDMEALRDQLELYKSTNRPLLGSFSACSNVTGTYSDTRAIARLLHKNGAFACFDFAASGPYAKIEMRSGEIDGYDAVFISPHKFLGGPGTPGILVMNKALYRLRTSPPSTCGGGTVDFVNPYNEKDTLYVENIEEREDAGTPPIIQKVRTALAFWVKEFISHKVIERMEHTYIE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="88049" PGL_stop="88771"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="88049" e_stop="88057"/>
            <exon e_start="88139" e_stop="88771"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.984"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="88049" e_stop="88057" e_length="9"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="88058" i_stop="88138" i_length="81"/>
          </intron>
          <exon e_serial="2" e_score="0.984">
            <gDNA_exon_boundary e_start="88139" e_stop="88771" e_length="633"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88049" stop="88057"/>
              <exon start="88139" stop="88771"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398459" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88157" stop="88758"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392344" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGAAATG : GGCTATACTGGAGTTAAGCCGGGATGGACAAGGATAAGCTTTCCCTACTACATGTCGAAAGAAGAATTTGAGTTCATTCTAGCAGCATTAGAATTCATATCCATTTATGGACAAAGGTTCCTTCCTTTATACAATTTCAATTGGAAGAGTGGTGCTTGGACTTTCAAAAAGAAAGCTTTGAAAGAGACGCTTACGAGAGGGATGGATCACAATTGCAACTTTTGTGGCTCACCAATGATGAAGGAGTTGAACTTAGGTGGTGCCAATACTTGCCATGATAACACAAAAGAAGGATCATGCACTAACAGTAACAAAGAAGGCATTATTTATAAGTACGTAAAGTATCTTGAGACAGCCAAGCGCGTAGCTAGCCTCCTTCCTAAATTCCCACAGCAGAGACCAATACCTGAAGAACTAGACACTAATCTTGTGTCCTTTAGAGCCTGATAAAAATATGTATATGAAAATAAACTTTGTCCAATGTCTTGTTGGGCAAATTCGATCGTTTGATATGTAATAATAACTTCAAAGTCTATGTATTCCCTTCGTTTTGTTTTTACTTGTTCAGTATGTATTTTGTATTTTCTTTAAGAAAAACATAAAGTATTTTTTGATTTCTCATTTGGTGTTGAT</gDNA_template>
            <first_frame> I  E  M  :  G  Y  T  G  V  K  P  G  W  T  R  I  S  F  P  Y  Y  M  S  K  E  E  F  E  F  I  L  A  A  L  E  F  I  S  I  Y  G  Q  R  F  L  P  L  Y  N  F  N  W  K  S  G  A  W  T  F  K  K  K  A  L  K  E  T  L  T  R  G  M  D  H  N  C  N  F  C  G  S  P  M  M  K  E  L  N  L  G  G  A  N  T  C  H  D  N  T  K  E  G  S  C  T  N  S  N  K  E  G  I  I  Y  K  Y  V  K  Y  L  E  T  A  K  R  V  A  S  L  L  P  K  F  P  Q  Q  R  P  I  P  E  E  L  D  T  N  L  V  S  F  R  A  *  *  K  Y  V  Y  E  N  K  L  C  P  M  S  C  W  A  N  S  I  V  *  Y  V  I  I  T  S  K  S  M  Y  S  L  R  F  V  F  T  C  S  V  C  I  L  Y  F  L  *  E  K  H  K  V  F  F  D  F  S  F  G  V  D </first_frame>
            <second_frame>  L  K  W :   A  I  L  E  L  S  R  D  G  Q  G  *  A  F  P  T  T  C  R  K  K  N  L  S  S  F  *  Q  H  *  N  S  Y  P  F  M  D  K  G  S  F  L  Y  T  I  S  I  G  R  V  V  L  G  L  S  K  R  K  L  *  K  R  R  L  R  E  G  W  I  T  I  A  T  F  V  A  H  Q  *  *  R  S  *  T  *  V  V  P  I  L  A  M  I  T  Q  K  K  D  H  A  L  T  V  T  K  K  A  L  F  I  S  T  *  S  I  L  R  Q  P  S  A  *  L  A  S  F  L  N  S  H  S  R  D  Q  Y  L  K  N  *  T  L  I  L  C  P  L  E  P  D  K  N  M  Y  M  K  I  N  F  V  Q  C  L  V  G  Q  I  R  S  F  D  M  *  *  *  L  Q  S  L  C  I  P  F  V  L  F  L  L  V  Q  Y  V  F  C  I  F  F  K  K  N  I  K  Y  F  L  I  S  H  L  V  L   </second_frame>
            <third_frame>   *  N   : G  L  Y  W  S  *  A  G  M  D  K  D  K  L  S  L  L  H  V  E  R  R  I  *  V  H  S  S  S  I  R  I  H  I  H  L  W  T  K  V  P  S  F  I  Q  F  Q  L  E  E  W  C  L  D  F  Q  K  E  S  F  E  R  D  A  Y  E  R  D  G  S  Q  L  Q  L  L  W  L  T  N  D  E  G  V  E  L  R  W  C  Q  Y  L  P  *  *  H  K  R  R  I  M  H  *  Q  *  Q  R  R  H  Y  L  *  V  R  K  V  S  *  D  S  Q  A  R  S  *  P  P  S  *  I  P  T  A  E  T  N  T  *  R  T  R  H  *  S  C  V  L  *  S  L  I  K  I  C  I  *  K  *  T  L  S  N  V  L  L  G  K  F  D  R  L  I  C  N  N  N  F  K  V  Y  V  F  P  S  F  C  F  Y  L  F  S  M  Y  F  V  F  S  L  R  K  T  *  S  I  F  *  F  L  I  W  C  *  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88049" stop="88057"/>
                    <exon start="88139" stop="88585"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>453</number_coding_nucleotides>
                  <number_encoded_amino_acids>151</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IEMGYTGVKPGWTRISFPYYMSKEEFEFILAALEFISIYGQRFLPLYNFNWKSGAWTFKKKALKETLTRGMDHNCNFCGSPMMKELNLGGANTCHDNTKEGSCTNSNKEGIIYKYVKYLETAKRVASLLPKFPQQRPIPEELDTNLVSFRA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="88135" e_stop="88758"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.980">
            <gDNA_exon_boundary e_start="88135" e_stop="88758" e_length="624"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88135" stop="88430"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E236200" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="88157" stop="88758"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E392344" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATAGGGCTATACTGGAGTTAAGCCGGGATGGACAAGGATAAGCTTTCCCTACTACATGTCGAAAGAAGAATTTGAGTTCATTCTAGCAGCATTAGAATTCATATCCATTTATGGACAAAGGTTCCTTCCTTTATACAATTTCAATTGGAAGAGTGGTGCTTGGACTTTCAAAAAGAAAGCTTTGAAAGAGACGCTTACGAGAGGGATGGATCACAATTGCAACTTTTGTGGCTCACCAATGATGAAGGAGTTGAACTTAGGTGGTGCCAATACTTGCCATGATAACACAAAAGAAGGATCATGCACTAACAGTAACAAAGAAGGCATTATTTATAAGTACGTAAAGTATCTTGAGACAGCCAAGCGCGTAGCTAGCCTCCTTCCTAAATTCCCACAGCAGAGACCAATACCTGAAGAACTAGACACTAATCTTGTGTCCTTTAGAGCCTGATAAAAATATGTATATGAAAATAAACTTTGTCCAATGTCTTGTTGGGCAAATTCGATCGTTTGATATGTAATAATAACTTCAAAGTCTATGTATTCCCTTCGTTTTGTTTTTACTTGTTCAGTATGTATTTTGTATTTTCTTTAAGAAAAACATAAAGTATTTTTTGATTTCTC</gDNA_template>
            <first_frame> I  G  L  Y  W  S  *  A  G  M  D  K  D  K  L  S  L  L  H  V  E  R  R  I  *  V  H  S  S  S  I  R  I  H  I  H  L  W  T  K  V  P  S  F  I  Q  F  Q  L  E  E  W  C  L  D  F  Q  K  E  S  F  E  R  D  A  Y  E  R  D  G  S  Q  L  Q  L  L  W  L  T  N  D  E  G  V  E  L  R  W  C  Q  Y  L  P  *  *  H  K  R  R  I  M  H  *  Q  *  Q  R  R  H  Y  L  *  V  R  K  V  S  *  D  S  Q  A  R  S  *  P  P  S  *  I  P  T  A  E  T  N  T  *  R  T  R  H  *  S  C  V  L  *  S  L  I  K  I  C  I  *  K  *  T  L  S  N  V  L  L  G  K  F  D  R  L  I  C  N  N  N  F  K  V  Y  V  F  P  S  F  C  F  Y  L  F  S  M  Y  F  V  F  S  L  R  K  T  *  S  I  F  *  F  L </first_frame>
            <second_frame>  *  G  Y  T  G  V  K  P  G  W  T  R  I  S  F  P  Y  Y  M  S  K  E  E  F  E  F  I  L  A  A  L  E  F  I  S  I  Y  G  Q  R  F  L  P  L  Y  N  F  N  W  K  S  G  A  W  T  F  K  K  K  A  L  K  E  T  L  T  R  G  M  D  H  N  C  N  F  C  G  S  P  M  M  K  E  L  N  L  G  G  A  N  T  C  H  D  N  T  K  E  G  S  C  T  N  S  N  K  E  G  I  I  Y  K  Y  V  K  Y  L  E  T  A  K  R  V  A  S  L  L  P  K  F  P  Q  Q  R  P  I  P  E  E  L  D  T  N  L  V  S  F  R  A  *  *  K  Y  V  Y  E  N  K  L  C  P  M  S  C  W  A  N  S  I  V  *  Y  V  I  I  T  S  K  S  M  Y  S  L  R  F  V  F  T  C  S  V  C  I  L  Y  F  L  *  E  K  H  K  V  F  F  D  F   </second_frame>
            <third_frame>   R  A  I  L  E  L  S  R  D  G  Q  G  *  A  F  P  T  T  C  R  K  K  N  L  S  S  F  *  Q  H  *  N  S  Y  P  F  M  D  K  G  S  F  L  Y  T  I  S  I  G  R  V  V  L  G  L  S  K  R  K  L  *  K  R  R  L  R  E  G  W  I  T  I  A  T  F  V  A  H  Q  *  *  R  S  *  T  *  V  V  P  I  L  A  M  I  T  Q  K  K  D  H  A  L  T  V  T  K  K  A  L  F  I  S  T  *  S  I  L  R  Q  P  S  A  *  L  A  S  F  L  N  S  H  S  R  D  Q  Y  L  K  N  *  T  L  I  L  C  P  L  E  P  D  K  N  M  Y  M  K  I  N  F  V  Q  C  L  V  G  Q  I  R  S  F  D  M  *  *  *  L  Q  S  L  C  I  P  F  V  L  F  L  L  V  Q  Y  V  F  C  I  F  F  K  K  N  I  K  Y  F  L  I  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="11" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="88139" stop="88585"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>444</number_coding_nucleotides>
                  <number_encoded_amino_acids>148</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GYTGVKPGWTRISFPYYMSKEEFEFILAALEFISIYGQRFLPLYNFNWKSGAWTFKKKALKETLTRGMDHNCNFCGSPMMKELNLGGANTCHDNTKEGSCTNSNKEGIIYKYVKYLETAKRVASLLPKFPQQRPIPEELDTNLVSFRA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="90490" PGL_stop="89759"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90490" e_stop="90280"/>
            <exon e_start="90194" e_stop="89993"/>
            <exon e_start="89905" e_stop="89759"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.991" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.992" e_score="0.965"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90490" e_stop="90280" e_length="211"/>
          </exon>
          <intron i_serial="1" don_prob="0.991" acc_prob="1.000">
            <gDNA_intron_boundary i_start="90279" i_stop="90195" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="90194" e_stop="89993" e_length="202"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.992">
            <gDNA_intron_boundary i_start="89992" i_stop="89906" i_length="87"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89905" e_stop="89759" e_length="147"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90490" stop="90280"/>
              <exon start="90194" stop="89993"/>
              <exon start="89905" stop="89759"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E397872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90490" stop="90280"/>
              <exon start="90194" stop="89993"/>
              <exon start="89905" stop="89765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395496" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90489" stop="90280"/>
              <exon start="90194" stop="89993"/>
              <exon start="89905" stop="89765"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205162" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTGAGGTTGTAGAGATTGGATTGGACGAAAACGGGCTAGTAGATATGGAAGCATTGAGGGATCAGCTTGAGTTGTATAAGTCTACGAATAGACCATTGTTGGGTTCGTTCTCAGCTTGTAGTAATGTTACTGGGACTTATTCTGATACAAGAGCCATCGCTCGTTTACTTCATAAAAATGGAGCTTTTGCTTGCTTTGATTTCGCAGCAAG : TGGTCCATACGCGAAAATAGAGATGAGATCAGGAGAGATGGATGGATATGATGCTGTTTTTATTAGTCCTCATAAGTTTCTTGGAGGTCCAGGCACACCTGGAGTTCTTGTAATGAACAAAGCACTCTATAGATTGAGGACTTCGCCTCCATCTACTTGTGGAGGTGGTACTGTTGATTTTGTTAACCCCTACAATGAAAAG : GACACACTTTATGTGGAGAATATTGAAGAAAGGGAAGACGCTGGTACACCGCCAATCATTCAGAAAGTGAGAACAGCACTTGCATTTTGGGTGAAAGAGTTCATAAGTCATAAAGTAATTGAAAGAATGGAACACACTTACATTGAA</gDNA_template>
            <first_frame> L  R  L  *  R  L  D  W  T  K  T  G  *  *  I  W  K  H  *  G  I  S  L  S  C  I  S  L  R  I  D  H  C  W  V  R  S  Q  L  V  V  M  L  L  G  L  I  L  I  Q  E  P  S  L  V  Y  F  I  K  M  E  L  L  L  A  L  I  S  Q  Q   : V  V  H  T  R  K  *  R  *  D  Q  E  R  W  M  D  M  M  L  F  L  L  V  L  I  S  F  L  E  V  Q  A  H  L  E  F  L  *  *  T  K  H  S  I  D  *  G  L  R  L  H  L  L  V  E  V  V  L  L  I  L  L  T  P  T  M  K  R :   T  H  F  M  W  R  I  L  K  K  G  K  T  L  V  H  R  Q  S  F  R  K  *  E  Q  H  L  H  F  G  *  K  S  S  *  V  I  K  *  L  K  E  W  N  T  L  T  L   </first_frame>
            <second_frame>  *  G  C  R  D  W  I  G  R  K  R  A  S  R  Y  G  S  I  E  G  S  A  *  V  V  *  V  Y  E  *  T  I  V  G  F  V  L  S  L  *  *  C  Y  W  D  L  F  *  Y  K  S  H  R  S  F  T  S  *  K  W  S  F  C  L  L  *  F  R  S  K  :  W  S  I  R  E  N  R  D  E  I  R  R  D  G  W  I  *  C  C  F  Y  *  S  S  *  V  S  W  R  S  R  H  T  W  S  S  C  N  E  Q  S  T  L  *  I  E  D  F  A  S  I  Y  L  W  R  W  Y  C  *  F  C  *  P  L  Q  *  K   : G  H  T  L  C  G  E  Y  *  R  K  G  R  R  W  Y  T  A  N  H  S  E  S  E  N  S  T  C  I  L  G  E  R  V  H  K  S  *  S  N  *  K  N  G  T  H  L  H  *  </second_frame>
            <third_frame>   E  V  V  E  I  G  L  D  E  N  G  L  V  D  M  E  A  L  R  D  Q  L  E  L  Y  K  S  T  N  R  P  L  L  G  S  F  S  A  C  S  N  V  T  G  T  Y  S  D  T  R  A  I  A  R  L  L  H  K  N  G  A  F  A  C  F  D  F  A  A  S :   G  P  Y  A  K  I  E  M  R  S  G  E  M  D  G  Y  D  A  V  F  I  S  P  H  K  F  L  G  G  P  G  T  P  G  V  L  V  M  N  K  A  L  Y  R  L  R  T  S  P  P  S  T  C  G  G  G  T  V  D  F  V  N  P  Y  N  E  K  :  D  T  L  Y  V  E  N  I  E  E  R  E  D  A  G  T  P  P  I  I  Q  K  V  R  T  A  L  A  F  W  V  K  E  F  I  S  H  K  V  I  E  R  M  E  H  T  Y  I  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90488" stop="90280"/>
                    <exon start="90194" stop="89993"/>
                    <exon start="89905" stop="89759"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>558</number_coding_nucleotides>
                  <number_encoded_amino_acids>186</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EVVEIGLDENGLVDMEALRDQLELYKSTNRPLLGSFSACSNVTGTYSDTRAIARLLHKNGAFACFDFAASGPYAKIEMRSGEMDGYDAVFISPHKFLGGPGTPGVLVMNKALYRLRTSPPSTCGGGTVDFVNPYNEKDTLYVENIEEREDAGTPPIIQKVRTALAFWVKEFISHKVIERMEHTYIE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="97647" PGL_stop="98434"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="97647" e_stop="98434"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="97647" e_stop="98434" e_length="788"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97647" stop="98096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E279268" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="97939" stop="98434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E267214" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAGGAAAAAAATATATATATTTGAAAAGCAAAGTCAATATGTCTTGTAATTTCCACTTCTTATTGATTCTTGTTTTCTTGATTTCACTTCATGAATTACCAACAATTTCCACCACCTCATCATCAATTGATTTGATTCAAAAAACATGTAAAAACACAAAATACTATGATCTTTGTGTATCATCTCTCAAATCAGATTCCACAAGCCTCAAAGCAGACACAAAAGGCTTAGCAACTATCATGGTCAAAATTGGAATGGTCAATGCCACAGCCACAAACAATTTTCTTTCATCACATGAATTAGTACTTAACACTACTAATAATTACACAAATAATGATTTGGTATTAATGAAGAAACTCATCAAAGATTGTGCTGATAAATATGCATTAGCTACTAATGCACTTCAAGATTCACTTCAAGATTTGAATAATGAAGTTTATGACTATGCTTACATGCATGTTATGGCGGCTGCGGATTATCCTAACGTTTGTCATAATGGATTTAAGAGGAATCCAAGATTGGATTATCCAACTCAACTTGCTATTAGGGAAGATGGATTTAAACATATTTGTGATGTGGTTTTAGGTATTCTTGATGCTCTTGGTTGGTGAAAAAAAATAATCCCCTTTTTTTTTTTTTATGTTATATGATATGTAAACTTTTTCTATTATTATATATGTGTTTAGTTTGTCTTTATCTATGTGTAGATTTAAAGAAATGAGGATTTGTATGTTGCCTTTAATTGTTCACTCTTTTTATGTATTGAGAGTTTACCTTTTTATGCAAG</gDNA_template>
            <first_frame> E  G  K  K  Y  I  Y  L  K  S  K  V  N  M  S  C  N  F  H  F  L  L  I  L  V  F  L  I  S  L  H  E  L  P  T  I  S  T  T  S  S  S  I  D  L  I  Q  K  T  C  K  N  T  K  Y  Y  D  L  C  V  S  S  L  K  S  D  S  T  S  L  K  A  D  T  K  G  L  A  T  I  M  V  K  I  G  M  V  N  A  T  A  T  N  N  F  L  S  S  H  E  L  V  L  N  T  T  N  N  Y  T  N  N  D  L  V  L  M  K  K  L  I  K  D  C  A  D  K  Y  A  L  A  T  N  A  L  Q  D  S  L  Q  D  L  N  N  E  V  Y  D  Y  A  Y  M  H  V  M  A  A  A  D  Y  P  N  V  C  H  N  G  F  K  R  N  P  R  L  D  Y  P  T  Q  L  A  I  R  E  D  G  F  K  H  I  C  D  V  V  L  G  I  L  D  A  L  G  W  *  K  K  I  I  P  F  F  F  F  Y  V  I  *  Y  V  N  F  F  Y  Y  Y  I  C  V  *  F  V  F  I  Y  V  *  I  *  R  N  E  D  L  Y  V  A  F  N  C  S  L  F  L  C  I  E  S  L  P  F  Y  A   </first_frame>
            <second_frame>  K  E  K  N  I  Y  I  *  K  A  K  S  I  C  L  V  I  S  T  S  Y  *  F  L  F  S  *  F  H  F  M  N  Y  Q  Q  F  P  P  P  H  H  Q  L  I  *  F  K  K  H  V  K  T  Q  N  T  M  I  F  V  Y  H  L  S  N  Q  I  P  Q  A  S  K  Q  T  Q  K  A  *  Q  L  S  W  S  K  L  E  W  S  M  P  Q  P  Q  T  I  F  F  H  H  M  N  *  Y  L  T  L  L  I  I  T  Q  I  M  I  W  Y  *  *  R  N  S  S  K  I  V  L  I  N  M  H  *  L  L  M  H  F  K  I  H  F  K  I  *  I  M  K  F  M  T  M  L  T  C  M  L  W  R  L  R  I  I  L  T  F  V  I  M  D  L  R  G  I  Q  D  W  I  I  Q  L  N  L  L  L  G  K  M  D  L  N  I  F  V  M  W  F  *  V  F  L  M  L  L  V  G  E  K  K  *  S  P  F  F  F  F  M  L  Y  D  M  *  T  F  S  I  I  I  Y  V  F  S  L  S  L  S  M  C  R  F  K  E  M  R  I  C  M  L  P  L  I  V  H  S  F  Y  V  L  R  V  Y  L  F  M  Q  </second_frame>
            <third_frame>   R  K  K  I  Y  I  F  E  K  Q  S  Q  Y  V  L  *  F  P  L  L  I  D  S  C  F  L  D  F  T  S  *  I  T  N  N  F  H  H  L  I  I  N  *  F  D  S  K  N  M  *  K  H  K  I  L  *  S  L  C  I  I  S  Q  I  R  F  H  K  P  Q  S  R  H  K  R  L  S  N  Y  H  G  Q  N  W  N  G  Q  C  H  S  H  K  Q  F  S  F  I  T  *  I  S  T  *  H  Y  *  *  L  H  K  *  *  F  G  I  N  E  E  T  H  Q  R  L  C  *  *  I  C  I  S  Y  *  C  T  S  R  F  T  S  R  F  E  *  *  S  L  *  L  C  L  H  A  C  Y  G  G  C  G  L  S  *  R  L  S  *  W  I  *  E  E  S  K  I  G  L  S  N  S  T  C  Y  *  G  R  W  I  *  T  Y  L  *  C  G  F  R  Y  S  *  C  S  W  L  V  K  K  N  N  P  L  F  F  F  L  C  Y  M  I  C  K  L  F  L  L  L  Y  M  C  L  V  C  L  Y  L  C  V  D  L  K  K  *  G  F  V  C  C  L  *  L  F  T  L  F  M  Y  *  E  F  T  F  L  C  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97647" stop="98258"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>609</number_coding_nucleotides>
                  <number_encoded_amino_acids>203</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGKKYIYLKSKVNMSCNFHFLLILVFLISLHELPTISTTSSSIDLIQKTCKNTKYYDLCVSSLKSDSTSLKADTKGLATIMVKIGMVNATATNNFLSSHELVLNTTNNYTNNDLVLMKKLIKDCADKYALATNALQDSLQDLNNEVYDYAYMHVMAAADYPNVCHNGFKRNPRLDYPTQLAIREDGFKHICDVVLGILDALGW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="101418" PGL_stop="107148"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="101418" e_stop="101526"/>
            <exon e_start="103969" e_stop="104057"/>
            <exon e_start="104715" e_stop="104951"/>
            <exon e_start="105033" e_stop="105137"/>
            <exon e_start="106119" e_stop="107148"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.550" e_score="1.000"/>
          <exon-intron don_prob="0.955" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.995" e_score="1.000"/>
          <exon-only e_score="0.988"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="101418" e_stop="101526" e_length="109"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.000">
            <gDNA_intron_boundary i_start="101527" i_stop="103968" i_length="2442"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="103969" e_stop="104057" e_length="89"/>
          </exon>
          <intron i_serial="2" don_prob="0.978" acc_prob="0.550">
            <gDNA_intron_boundary i_start="104058" i_stop="104714" i_length="657"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="104715" e_stop="104951" e_length="237"/>
          </exon>
          <intron i_serial="3" don_prob="0.955" acc_prob="0.980">
            <gDNA_intron_boundary i_start="104952" i_stop="105032" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="105033" e_stop="105137" e_length="105"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.995">
            <gDNA_intron_boundary i_start="105138" i_stop="106118" i_length="981"/>
          </intron>
          <exon e_serial="5" e_score="0.988">
            <gDNA_exon_boundary e_start="106119" e_stop="107148" e_length="1030"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101418" stop="101526"/>
              <exon start="103969" stop="104057"/>
              <exon start="104715" stop="104916"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E709462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101425" stop="101526"/>
              <exon start="103969" stop="104057"/>
              <exon start="104715" stop="104951"/>
              <exon start="105033" stop="105137"/>
              <exon start="106119" stop="106461"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E727658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101458" stop="101526"/>
              <exon start="103969" stop="104057"/>
              <exon start="104715" stop="104951"/>
              <exon start="105033" stop="105096"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E476730" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101467" stop="101526"/>
              <exon start="103969" stop="104057"/>
              <exon start="104715" stop="104951"/>
              <exon start="105033" stop="105116"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331317" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101472" stop="101526"/>
              <exon start="103969" stop="104057"/>
              <exon start="104715" stop="104951"/>
              <exon start="105033" stop="105137"/>
              <exon start="106119" stop="106333"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544618" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101475" stop="101526"/>
              <exon start="103969" stop="104057"/>
              <exon start="104715" stop="104951"/>
              <exon start="105033" stop="105055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306007" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="101482" stop="101526"/>
              <exon start="103969" stop="104057"/>
              <exon start="104715" stop="104951"/>
              <exon start="105033" stop="105115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E256443" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104849" stop="104951"/>
              <exon start="105033" stop="105137"/>
              <exon start="106119" stop="106504"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E564016" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106311" stop="107133"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537715" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106312" stop="106833"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E266946" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106417" stop="107148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544617" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGCTTTACTTTACCCAAGCGTTACTTGTAATACGAAAGAAACAAAACCCTACACCAGAAACATCTTTTATCAGTTCTTGGTCGATAGATGCATCTTCTTGATTAATCAG : AATACATTATTTCCTGTGGGATCTTGCTGTCATTGTTCTGTTACTGTAATCAGACTCATGAAGGTGTGGCATCAGCACTTGACGTGAAG : GATTACTTTCATGATCTGCAGCCTCTCCATCTACTACTTCAGTGACTATAGAAATGAAGCCAAGAACCAACGGGGTGTCAAGGTCCCAGAAGTCCAATGGTGTTCAGAGTGAGGGTCCTAACTGGGTCATAATTGCAGGTAGTGCGTTATTAAGTACATTATCTGTACGCTTAGGGTACAAGCTGAAGCAGGTGCTTGATTCAAGACAGCCAAACAAGACGACCAGCAGTTTGAAAG : GAAATGAAAAGTCTTCTGATGGAAGTAAGTTAGGGAATGGTCATATGCAGTCAAGCACTTACTATTTTTCCCAAGATGATGATGGCTGCTACAATTGCAACACGG : AAGCTGGAGGATTAGGAATTACAAAGCAGCAGTATAATGGGTCTGAGCCTGAAATGGTGCTCCCTCTGGTGGCAGTTCCTGCCATCGGATTCAATAAAGAGAATGGTGGGGTTTGGTCAACCTCTCCTGACCGTCTTGAACTACCACAGAAACCATTTCATCGCTCTAACAGCTCTGAGTCACCATGTGTCTCTGAATCCGGTTCTGACATATACAGCAAGCGAGAAGTGATACAAAAGCTGAGGCTACAGTTAAAGAGAAGGGACGAAACAATATTAGAGATGCAAGAACAGATTGTAGAGTTGCAAGCTTCTCTCAATGCTCAGATGTCGCATTCTGCTCATCAGCAGTCATTGCTGGATGCTGCCAACAGGGATCTGTTTGATTCGGAGAGAGAGATACAGAGGCTGAGGAAGGCTATTGCAGATCATTGTGTTGGACAAGTAGGTTCGTGCGATAAGCCCCCAACAGTACCTGTATGGCCAGCTGAAGTCCGTTATGGTCATCATACTAACGGCCACCTTGAAGTTGATAGGAATTCAGATACTTCAGAGAAGGGAAGAGGAGATGGAGAAAGGTTTGAAATGCTGAAGCGCGAAAAAGATGAGTTGAAAGAAGTGATCGAAGGGAAGGATTATCTGATCAAGAACTACAAGGAGCAAACCGTCGAGCTTTCAATCAAGGTCAAGGAACTGCAACAGAGACTGGATGCTCAGCTCCCAAACATTTTGTAGCCGCGTCGTTAGAGTTGTGTATTCTTTTGTTTGCTTCCCATTCTCTTGATTGATTTTAAAGCTTCATGACATGGGACTTGCTATTTTCTCAGTTTTATCTGAGTTTTTTCTCCCCTCCCCCTCCCTCCACCTTTCTGTTTTGTGTTCATCATGTCGACGAACCGATTTTCGATATACCTTCTCTTAGTATTAGTAGATTGAGTTTGAGGATTGCCCTCCTGTGTTGCTGAACATGTAAAAATGGTTCATCATGCATTGAAAAATTTTCATCTATATATTCAAGAGACTTTTGCTCA</gDNA_template>
            <first_frame> C  F  T  L  P  K  R  Y  L  *  Y  E  R  N  K  T  L  H  Q  K  H  L  L  S  V  L  G  R  *  M  H  L  L  D  *  S   : E  Y  I  I  S  C  G  I  L  L  S  L  F  C  Y  C  N  Q  T  H  E  G  V  A  S  A  L  D  V  K  :  D  Y  F  H  D  L  Q  P  L  H  L  L  L  Q  *  L  *  K  *  S  Q  E  P  T  G  C  Q  G  P  R  S  P  M  V  F  R  V  R  V  L  T  G  S  *  L  Q  V  V  R  Y  *  V  H  Y  L  Y  A  *  G  T  S  *  S  R  C  L  I  Q  D  S  Q  T  R  R  P  A  V  *  K  :  E  M  K  S  L  L  M  E  V  S  *  G  M  V  I  C  S  Q  A  L  T  I  F  P  K  M  M  M  A  A  T  I  A  T  R  :  K  L  E  D  *  E  L  Q  S  S  S  I  M  G  L  S  L  K  W  C  S  L  W  W  Q  F  L  P  S  D  S  I  K  R  M  V  G  F  G  Q  P  L  L  T  V  L  N  Y  H  R  N  H  F  I  A  L  T  A  L  S  H  H  V  S  L  N  P  V  L  T  Y  T  A  S  E  K  *  Y  K  S  *  G  Y  S  *  R  E  G  T  K  Q  Y  *  R  C  K  N  R  L  *  S  C  K  L  L  S  M  L  R  C  R  I  L  L  I  S  S  H  C  W  M  L  P  T  G  I  C  L  I  R  R  E  R  Y  R  G  *  G  R  L  L  Q  I  I  V  L  D  K  *  V  R  A  I  S  P  Q  Q  Y  L  Y  G  Q  L  K  S  V  M  V  I  I  L  T  A  T  L  K  L  I  G  I  Q  I  L  Q  R  R  E  E  E  M  E  K  G  L  K  C  *  S  A  K  K  M  S  *  K  K  *  S  K  G  R  I  I  *  S  R  T  T  R  S  K  P  S  S  F  Q  S  R  S  R  N  C  N  R  D  W  M  L  S  S  Q  T  F  C  S  R  V  V  R  V  V  Y  S  F  V  C  F  P  F  S  *  L  I  L  K  L  H  D  M  G  L  A  I  F  S  V  L  S  E  F  F  L  P  S  P  S  L  H  L  S  V  L  C  S  S  C  R  R  T  D  F  R  Y  T  F  S  *  Y  *  *  I  E  F  E  D  C  P  P  V  L  L  N  M  *  K  W  F  I  M  H  *  K  I  F  I  Y  I  F  K  R  L  L  L  </first_frame>
            <second_frame>  A  L  L  Y  P  S  V  T  C  N  T  K  E  T  K  P  Y  T  R  N  I  F  Y  Q  F  L  V  D  R  C  I  F  L  I  N  Q  :  N  T  L  F  P  V  G  S  C  C  H  C  S  V  T  V  I  R  L  M  K  V  W  H  Q  H  L  T  *  R :   I  T  F  M  I  C  S  L  S  I  Y  Y  F  S  D  Y  R  N  E  A  K  N  Q  R  G  V  K  V  P  E  V  Q  W  C  S  E  *  G  S  *  L  G  H  N  C  R  *  C  V  I  K  Y  I  I  C  T  L  R  V  Q  A  E  A  G  A  *  F  K  T  A  K  Q  D  D  Q  Q  F  E  R :   K  *  K  V  F  *  W  K  *  V  R  E  W  S  Y  A  V  K  H  L  L  F  F  P  R  *  *  W  L  L  Q  L  Q  H  G :   S  W  R  I  R  N  Y  K  A  A  V  *  W  V  *  A  *  N  G  A  P  S  G  G  S  S  C  H  R  I  Q  *  R  E  W  W  G  L  V  N  L  S  *  P  S  *  T  T  T  E  T  I  S  S  L  *  Q  L  *  V  T  M  C  L  *  I  R  F  *  H  I  Q  Q  A  R  S  D  T  K  A  E  A  T  V  K  E  K  G  R  N  N  I  R  D  A  R  T  D  C  R  V  A  S  F  S  Q  C  S  D  V  A  F  C  S  S  A  V  I  A  G  C  C  Q  Q  G  S  V  *  F  G  E  R  D  T  E  A  E  E  G  Y  C  R  S  L  C  W  T  S  R  F  V  R  *  A  P  N  S  T  C  M  A  S  *  S  P  L  W  S  S  Y  *  R  P  P  *  S  *  *  E  F  R  Y  F  R  E  G  K  R  R  W  R  K  V  *  N  A  E  A  R  K  R  *  V  E  R  S  D  R  R  E  G  L  S  D  Q  E  L  Q  G  A  N  R  R  A  F  N  Q  G  Q  G  T  A  T  E  T  G  C  S  A  P  K  H  F  V  A  A  S  L  E  L  C  I  L  L  F  A  S  H  S  L  D  *  F  *  S  F  M  T  W  D  L  L  F  S  Q  F  Y  L  S  F  F  S  P  P  P  P  S  T  F  L  F  C  V  H  H  V  D  E  P  I  F  D  I  P  S  L  S  I  S  R  L  S  L  R  I  A  L  L  C  C  *  T  C  K  N  G  S  S  C  I  E  K  F  S  S  I  Y  S  R  D  F  C  S </second_frame>
            <third_frame>   L  Y  F  T  Q  A  L  L  V  I  R  K  K  Q  N  P  T  P  E  T  S  F  I  S  S  W  S  I  D  A  S  S  *  L  I  R :   I  H  Y  F  L  W  D  L  A  V  I  V  L  L  L  *  S  D  S  *  R  C  G  I  S  T  *  R  E   : G  L  L  S  *  S  A  A  S  P  S  T  T  S  V  T  I  E  M  K  P  R  T  N  G  V  S  R  S  Q  K  S  N  G  V  Q  S  E  G  P  N  W  V  I  I  A  G  S  A  L  L  S  T  L  S  V  R  L  G  Y  K  L  K  Q  V  L  D  S  R  Q  P  N  K  T  T  S  S  L  K   : G  N  E  K  S  S  D  G  S  K  L  G  N  G  H  M  Q  S  S  T  Y  Y  F  S  Q  D  D  D  G  C  Y  N  C  N  T   : E  A  G  G  L  G  I  T  K  Q  Q  Y  N  G  S  E  P  E  M  V  L  P  L  V  A  V  P  A  I  G  F  N  K  E  N  G  G  V  W  S  T  S  P  D  R  L  E  L  P  Q  K  P  F  H  R  S  N  S  S  E  S  P  C  V  S  E  S  G  S  D  I  Y  S  K  R  E  V  I  Q  K  L  R  L  Q  L  K  R  R  D  E  T  I  L  E  M  Q  E  Q  I  V  E  L  Q  A  S  L  N  A  Q  M  S  H  S  A  H  Q  Q  S  L  L  D  A  A  N  R  D  L  F  D  S  E  R  E  I  Q  R  L  R  K  A  I  A  D  H  C  V  G  Q  V  G  S  C  D  K  P  P  T  V  P  V  W  P  A  E  V  R  Y  G  H  H  T  N  G  H  L  E  V  D  R  N  S  D  T  S  E  K  G  R  G  D  G  E  R  F  E  M  L  K  R  E  K  D  E  L  K  E  V  I  E  G  K  D  Y  L  I  K  N  Y  K  E  Q  T  V  E  L  S  I  K  V  K  E  L  Q  Q  R  L  D  A  Q  L  P  N  I  L  *  P  R  R  *  S  C  V  F  F  C  L  L  P  I  L  L  I  D  F  K  A  S  *  H  G  T  C  Y  F  L  S  F  I  *  V  F  S  P  L  P  L  P  P  P  F  C  F  V  F  I  M  S  T  N  R  F  S  I  Y  L  L  L  V  L  V  D  *  V  *  G  L  P  S  C  V  A  E  H  V  K  M  V  H  H  A  L  K  N  F  H  L  Y  I  Q  E  T  F  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="104729" stop="104951"/>
                    <exon start="105033" stop="105137"/>
                    <exon start="106119" stop="106852"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1059</number_coding_nucleotides>
                  <number_encoded_amino_acids>353</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SAASPSTTSVTIEMKPRTNGVSRSQKSNGVQSEGPNWVIIAGSALLSTLSVRLGYKLKQVLDSRQPNKTTSSLKGNEKSSDGSKLGNGHMQSSTYYFSQDDDGCYNCNTEAGGLGITKQQYNGSEPEMVLPLVAVPAIGFNKENGGVWSTSPDRLELPQKPFHRSNSSESPCVSESGSDIYSKREVIQKLRLQLKRRDETILEMQEQIVELQASLNAQMSHSAHQQSLLDAANRDLFDSEREIQRLRKAIADHCVGQVGSCDKPPTVPVWPAEVRYGHHTNGHLEVDRNSDTSEKGRGDGERFEMLKREKDELKEVIEGKDYLIKNYKEQTVELSIKVKELQQRLDAQLPNIL*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="101419" stop="101526"/>
                    <exon start="103969" stop="104055"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALLYPSVTCNTKETKPYTRNIFYQFLVDRCIFLINQNTLFPVGSCCHCSVTVIRLMKVWHQHLT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="107135" PGL_stop="106530"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107135" e_stop="106530"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="107135" e_stop="106530" e_length="606"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107135" stop="106530"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E537713" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTGAATATATAGATGAAAATTTTTCAATGCATGATGAACCATTTTTACATGTTCAGCAACACAGGAGGGCAATCCTCAAACTCAATCTACTAATACTAAGAGAAGGTATATCGAAAATCGGTTCGTCGACATGATGAACACAAAACAGAAAGGTGGAGGGAGGGGGAGGGGAGAAAAAACTCAGATAAAACTGAGAAAATAGCAAGTCCCATGTCATGAAGCTTTAAAATCAATCAAGAGAATGGGAAGCAAACAAAAGAATACACAACTCTAACGACGCGGCTACAAAATGTTTGGGAGCTGAGCATCCAGTCTCTGTTGCAGTTCCTTGACCTTGATTGAAAGCTCGACGGTTTGCTCCTTGTAGTTCTTGATCAGATAATCCTTCCCTTCGATCACTTCTTTCAACTCATCTTTTTCGCGCTTCAGCATTTCAAACCTTTCTCCATCTCCTCTTCCCTTCTCTGAAGTATCTGAATTCCTATCAACTTCAAGGTGGCCGTTAGTATGATGACCATAACGGACTTCAGCTGGCCATACAGGTACTGTTGGGGGCTTATCGCACGAACCTACTTGTCCAACACAATGATCTGCAATAGCCTTCC</gDNA_template>
            <first_frame> L  E  Y  I  D  E  N  F  S  M  H  D  E  P  F  L  H  V  Q  Q  H  R  R  A  I  L  K  L  N  L  L  I  L  R  E  G  I  S  K  I  G  S  S  T  *  *  T  Q  N  R  K  V  E  G  G  G  G  E  K  K  L  R  *  N  *  E  N  S  K  S  H  V  M  K  L  *  N  Q  S  R  E  W  E  A  N  K  R  I  H  N  S  N  D  A  A  T  K  C  L  G  A  E  H  P  V  S  V  A  V  P  *  P  *  L  K  A  R  R  F  A  P  C  S  S  *  S  D  N  P  S  L  R  S  L  L  S  T  H  L  F  R  A  S  A  F  Q  T  F  L  H  L  L  F  P  S  L  K  Y  L  N  S  Y  Q  L  Q  G  G  R  *  Y  D  D  H  N  G  L  Q  L  A  I  Q  V  L  L  G  A  Y  R  T  N  L  L  V  Q  H  N  D  L  Q  *  P  S </first_frame>
            <second_frame>  L  N  I  *  M  K  I  F  Q  C  M  M  N  H  F  Y  M  F  S  N  T  G  G  Q  S  S  N  S  I  Y  *  Y  *  E  K  V  Y  R  K  S  V  R  R  H  D  E  H  K  T  E  R  W  R  E  G  E  G  R  K  N  S  D  K  T  E  K  I  A  S  P  M  S  *  S  F  K  I  N  Q  E  N  G  K  Q  T  K  E  Y  T  T  L  T  T  R  L  Q  N  V  W  E  L  S  I  Q  S  L  L  Q  F  L  D  L  D  *  K  L  D  G  L  L  L  V  V  L  D  Q  I  I  L  P  F  D  H  F  F  Q  L  I  F  F  A  L  Q  H  F  K  P  F  S  I  S  S  S  L  L  *  S  I  *  I  P  I  N  F  K  V  A  V  S  M  M  T  I  T  D  F  S  W  P  Y  R  Y  C  W  G  L  I  A  R  T  Y  L  S  N  T  M  I  C  N  S  L   </second_frame>
            <third_frame>   *  I  Y  R  *  K  F  F  N  A  *  *  T  I  F  T  C  S  A  T  Q  E  G  N  P  Q  T  Q  S  T  N  T  K  R  R  Y  I  E  N  R  F  V  D  M  M  N  T  K  Q  K  G  G  G  R  G  R  G  E  K  T  Q  I  K  L  R  K  *  Q  V  P  C  H  E  A  L  K  S  I  K  R  M  G  S  K  Q  K  N  T  Q  L  *  R  R  G  Y  K  M  F  G  S  *  A  S  S  L  C  C  S  S  L  T  L  I  E  S  S  T  V  C  S  L  *  F  L  I  R  *  S  F  P  S  I  T  S  F  N  S  S  F  S  R  F  S  I  S  N  L  S  P  S  P  L  P  F  S  E  V  S  E  F  L  S  T  S  R  W  P  L  V  *  *  P  *  R  T  S  A  G  H  T  G  T  V  G  G  L  S  H  E  P  T  C  P  T  Q  *  S  A  I  A  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C11HBa0054I23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="+" PGL_start="107515" PGL_stop="112767"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="107515" e_stop="107734"/>
            <exon e_start="109074" e_stop="109185"/>
            <exon e_start="110270" e_stop="110296"/>
            <exon e_start="110377" e_stop="110449"/>
            <exon e_start="111221" e_stop="111324"/>
            <exon e_start="111409" e_stop="111620"/>
            <exon e_start="111709" e_stop="111805"/>
            <exon e_start="112561" e_stop="112633"/>
            <exon e_start="112750" e_stop="112767"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.990" e_score="0.973"/>
          <exon-intron don_prob="0.952" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.882" e_score="1.000"/>
          <exon-intron don_prob="0.757" acc_prob="0.486" e_score="1.000"/>
          <exon-intron don_prob="0.932" acc_prob="0.230" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.733" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.946" e_score="0.979"/>
          <exon-intron don_prob="0.145" acc_prob="0.748" e_score="0.945"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="107515" e_stop="107734" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.990">
            <gDNA_intron_boundary i_start="107735" i_stop="109073" i_length="1339"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="109074" e_stop="109185" e_length="112"/>
          </exon>
          <intron i_serial="2" don_prob="0.952" acc_prob="0.995">
            <gDNA_intron_boundary i_start="109186" i_stop="110269" i_length="1084"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="110270" e_stop="110296" e_length="27"/>
          </exon>
          <intron i_serial="3" don_prob="0.994" acc_prob="0.882">
            <gDNA_intron_boundary i_start="110297" i_stop="110376" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="110377" e_stop="110449" e_length="73"/>
          </exon>
          <intron i_serial="4" don_prob="0.757" acc_prob="0.486">
            <gDNA_intron_boundary i_start="110450" i_stop="111220" i_length="771"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="111221" e_stop="111324" e_length="104"/>
          </exon>
          <intron i_serial="5" don_prob="0.932" acc_prob="0.230">
            <gDNA_intron_boundary i_start="111325" i_stop="111408" i_length="84"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="111409" e_stop="111620" e_length="212"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.733">
            <gDNA_intron_boundary i_start="111621" i_stop="111708" i_length="88"/>
          </intron>
          <exon e_serial="7" e_score="0.979">
            <gDNA_exon_boundary e_start="111709" e_stop="111805" e_length="97"/>
          </exon>
          <intron i_serial="7" don_prob="0.997" acc_prob="0.946">
            <gDNA_intron_boundary i_start="111806" i_stop="112560" i_length="755"/>
          </intron>
          <exon e_serial="8" e_score="0.945">
            <gDNA_exon_boundary e_start="112561" e_stop="112633" e_length="73"/>
          </exon>
          <intron i_serial="8" don_prob="0.145" acc_prob="0.748">
            <gDNA_intron_boundary i_start="112634" i_stop="112749" i_length="116"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="112750" e_stop="112767" e_length="18"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107515" stop="107734"/>
              <exon start="109074" stop="109185"/>
              <exon start="110270" stop="110296"/>
              <exon start="110377" stop="110449"/>
              <exon start="111221" stop="111324"/>
              <exon start="111409" stop="111468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251919" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107571" stop="107734"/>
              <exon start="109074" stop="109185"/>
              <exon start="110270" stop="110296"/>
              <exon start="110377" stop="110427"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E273234" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107595" stop="107734"/>
              <exon start="109074" stop="109185"/>
              <exon start="110270" stop="110296"/>
              <exon start="110377" stop="110449"/>
              <exon start="111221" stop="111324"/>
              <exon start="111409" stop="111620"/>
              <exon start="111709" stop="111736"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E425960" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107595" stop="107734"/>
              <exon start="109074" stop="109185"/>
              <exon start="110270" stop="110296"/>
              <exon start="110377" stop="110449"/>
              <exon start="111221" stop="111324"/>
              <exon start="111409" stop="111526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E455725" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107596" stop="107734"/>
              <exon start="109074" stop="109185"/>
              <exon start="110270" stop="110296"/>
              <exon start="110377" stop="110449"/>
              <exon start="111221" stop="111324"/>
              <exon start="111409" stop="111582"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312321" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110378" stop="110449"/>
              <exon start="111221" stop="111324"/>
              <exon start="111409" stop="111620"/>
              <exon start="111709" stop="111805"/>
              <exon start="112561" stop="112633"/>
              <exon start="112750" stop="112767"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E401638" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAACAAAATCACCATTTCTCTAAACCCTATTTTCTTCTTCTTCTCTTGCATTTTTCCAAAATCTCAAAAATTAGTAAGAAGAGAGATCAGGAAGCAACAAATAAGGATGAAGGGTGGTACAGTTCAGATCAATTGGCACGACAGTAAGCCAGTTTTGTGCCTTGATTTTCACCACCTCACCGGCGTTATTGCTACTGGTGGCGCCGACTATGATATCAAG : ATGTGGGTGATTGATTCTGAAGAAAATGAAAAGAAAGCGCCTTCAGTTACATACCAGGCTAGCCTTTCTTACCATAGTGGTGCTGTGAATGCTCTTCGGTTCTCCCCTTCAG : GAGAGCATTTGGCCTCTGGTGCCGATG : GCGGCGAGCTCATCATTTGGAAGCTACATTCTTCAGATGACAGCAAAACATGGAAAGTCCTAAAGACGTTATC : ATTTCACCGGAAGGATGTATTGGACTTGCAGTGGTCTGCTGATGGTTCTTTTTTAATTTCTGGTTCTGTTGATAATTCATGCATCGTATGGGATGTCAACAAAG : GTTCTGTTCATCAGATTTTGGATGCTCATTTGCACTATGTGCAAGGTGTGGCATGGGATCCATTGTCCAAGTATACTGCCTCACTCAGTTCAGATAGATCTTGCCGGATTTACAGCAATAGACCATCTAAAACAAAAGGAGTTGAGAAGTTGAATTTTGTGTGTCAACATGTCATTATGAAGGTTGAACCACAACTGCCGGATGAGTCCAAG : TCTACTAAAAATCATCTCTTTCTTGATGAGACACTGCCATCTTTCTTCCGAAGGTTATCTTGGTCTCCTGATGGTTCCTTTCTGCTTGTGCCTGCAG : GTTGTTACAAGTTTACACCTGCTTCAGAACCAGCAAACACTGCTTATGTGTTTTCTAGGAATGATCTTACAAG : GCCAGCTTTAATGCTCCC</gDNA_template>
            <first_frame> Q  Q  N  H  H  F  S  K  P  Y  F  L  L  L  L  L  H  F  S  K  I  S  K  I  S  K  K  R  D  Q  E  A  T  N  K  D  E  G  W  Y  S  S  D  Q  L  A  R  Q  *  A  S  F  V  P  *  F  S  P  P  H  R  R  Y  C  Y  W  W  R  R  L  *  Y  Q   : D  V  G  D  *  F  *  R  K  *  K  E  S  A  F  S  Y  I  P  G  *  P  F  L  P  *  W  C  C  E  C  S  S  V  L  P  F  R :   R  A  F  G  L  W  C  R  W :   R  R  A  H  H  L  E  A  T  F  F  R  *  Q  Q  N  M  E  S  P  K  D  V  I  :  I  S  P  E  G  C  I  G  L  A  V  V  C  *  W  F  F  F  N  F  W  F  C  *  *  F  M  H  R  M  G  C  Q  Q  R :   F  C  S  S  D  F  G  C  S  F  A  L  C  A  R  C  G  M  G  S  I  V  Q  V  Y  C  L  T  Q  F  R  *  I  L  P  D  L  Q  Q  *  T  I  *  N  K  R  S  *  E  V  E  F  C  V  S  T  C  H  Y  E  G  *  T  T  T  A  G  *  V  Q   : V  Y  *  K  S  S  L  S  *  *  D  T  A  I  F  L  P  K  V  I  L  V  S  *  W  F  L  S  A  C  A  C  R :   L  L  Q  V  Y  T  C  F  R  T  S  K  H  C  L  C  V  F  *  E  *  S  Y  K  :  A  S  F  N  A  P </first_frame>
            <second_frame>  N  K  I  T  I  S  L  N  P  I  F  F  F  F  S  C  I  F  P  K  S  Q  K  L  V  R  R  E  I  R  K  Q  Q  I  R  M  K  G  G  T  V  Q  I  N  W  H  D  S  K  P  V  L  C  L  D  F  H  H  L  T  G  V  I  A  T  G  G  A  D  Y  D  I  K  :  M  W  V  I  D  S  E  E  N  E  K  K  A  P  S  V  T  Y  Q  A  S  L  S  Y  H  S  G  A  V  N  A  L  R  F  S  P  S   : G  E  H  L  A  S  G  A  D   : G  G  E  L  I  I  W  K  L  H  S  S  D  D  S  K  T  W  K  V  L  K  T  L  S :   F  H  R  K  D  V  L  D  L  Q  W  S  A  D  G  S  F  L  I  S  G  S  V  D  N  S  C  I  V  W  D  V  N  K   : G  S  V  H  Q  I  L  D  A  H  L  H  Y  V  Q  G  V  A  W  D  P  L  S  K  Y  T  A  S  L  S  S  D  R  S  C  R  I  Y  S  N  R  P  S  K  T  K  G  V  E  K  L  N  F  V  C  Q  H  V  I  M  K  V  E  P  Q  L  P  D  E  S  K  :  S  T  K  N  H  L  F  L  D  E  T  L  P  S  F  F  R  R  L  S  W  S  P  D  G  S  F  L  L  V  P  A   : G  C  Y  K  F  T  P  A  S  E  P  A  N  T  A  Y  V  F  S  R  N  D  L  T  R :   P  A  L  M  L   </second_frame>
            <third_frame>   T  K  S  P  F  L  *  T  L  F  S  S  S  S  L  A  F  F  Q  N  L  K  N  *  *  E  E  R  S  G  S  N  K  *  G  *  R  V  V  Q  F  R  S  I  G  T  T  V  S  Q  F  C  A  L  I  F  T  T  S  P  A  L  L  L  L  V  A  P  T  M  I  S  R :   C  G  *  L  I  L  K  K  M  K  R  K  R  L  Q  L  H  T  R  L  A  F  L  T  I  V  V  L  *  M  L  F  G  S  P  L  Q  :  E  S  I  W  P  L  V  P  M  :  A  A  S  S  S  F  G  S  Y  I  L  Q  M  T  A  K  H  G  K  S  *  R  R  Y   : H  F  T  G  R  M  Y  W  T  C  S  G  L  L  M  V  L  F  *  F  L  V  L  L  I  I  H  A  S  Y  G  M  S  T  K  :  V  L  F  I  R  F  W  M  L  I  C  T  M  C  K  V  W  H  G  I  H  C  P  S  I  L  P  H  S  V  Q  I  D  L  A  G  F  T  A  I  D  H  L  K  Q  K  E  L  R  S  *  I  L  C  V  N  M  S  L  *  R  L  N  H  N  C  R  M  S  P  S :   L  L  K  I  I  S  F  L  M  R  H  C  H  L  S  S  E  G  Y  L  G  L  L  M  V  P  F  C  L  C  L  Q  :  V  V  T  S  L  H  L  L  Q  N  Q  Q  T  L  L  M  C  F  L  G  M  I  L  Q   : G  Q  L  *  C  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="107516" stop="107734"/>
                    <exon start="109074" stop="109185"/>
                    <exon start="110270" stop="110296"/>
                    <exon start="110377" stop="110449"/>
                    <exon start="111221" stop="111324"/>
                    <exon start="111409" stop="111620"/>
                    <exon start="111709" stop="111805"/>
                    <exon start="112561" stop="112633"/>
                    <exon start="112750" stop="112765"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>933</number_coding_nucleotides>
                  <number_encoded_amino_acids>311</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NKITISLNPIFFFFSCIFPKSQKLVRREIRKQQIRMKGGTVQINWHDSKPVLCLDFHHLTGVIATGGADYDIKMWVIDSEENEKKAPSVTYQASLSYHSGAVNALRFSPSGEHLASGADGGELIIWKLHSSDDSKTWKVLKTLSFHRKDVLDLQWSADGSFLISGSVDNSCIVWDVNKGSVHQILDAHLHYVQGVAWDPLSKYTASLSSDRSCRIYSNRPSKTKGVEKLNFVCQHVIMKVEPQLPDESKSTKNHLFLDETLPSFFRRLSWSPDGSFLLVPAGCYKFTPASEPANTAYVFSRNDLTRPALML</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="116763" PGL_stop="114148"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="116708" e_stop="116442"/>
            <exon e_start="115567" e_stop="115409"/>
            <exon e_start="114722" e_stop="114414"/>
            <exon e_start="114177" e_stop="114148"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.990" e_score="0.981"/>
          <exon-intron don_prob="0.698" acc_prob="0.976" e_score="0.994"/>
          <exon-intron don_prob="0.967" acc_prob="0.997" e_score="0.968"/>
          <exon-only e_score="0.867"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="116708" e_stop="116442" e_length="267"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.990">
            <gDNA_intron_boundary i_start="116441" i_stop="115568" i_length="874"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="115567" e_stop="115409" e_length="159"/>
          </exon>
          <intron i_serial="2" don_prob="0.698" acc_prob="0.976">
            <gDNA_intron_boundary i_start="115408" i_stop="114723" i_length="686"/>
          </intron>
          <exon e_serial="3" e_score="0.968">
            <gDNA_exon_boundary e_start="114722" e_stop="114414" e_length="309"/>
          </exon>
          <intron i_serial="3" don_prob="0.967" acc_prob="0.997">
            <gDNA_intron_boundary i_start="114413" i_stop="114178" i_length="236"/>
          </intron>
          <exon e_serial="4" e_score="0.867">
            <gDNA_exon_boundary e_start="114177" e_stop="114148" e_length="30"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116708" stop="116442"/>
              <exon start="115567" stop="115409"/>
              <exon start="114722" stop="114414"/>
              <exon start="114177" stop="114148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E435282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116708" stop="116442"/>
              <exon start="115567" stop="115409"/>
              <exon start="114722" stop="114451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465541" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGAAGTGTATATGAAGTAAATGGGAATAAGATCACAAAATTAATTCGATTTCTGGGAGTGAGGTTTAGTTCCTTCAATTTCACTGTCGAATTTTATCGATCTGTATTCCTTGTCCAACATACTTGGTCTTCCAAATATGGAATAAAGAGAGTTAGATCAACCCTTACGTTAGACAAGCTTGATGATATCAGCGATGAGTGGATCAATGCAGACGTCCTCATATTCAATTCTGGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGT : GGGGTGCTATTTCCAAGTAAATAGTACACTGAGGATTGGAATGTCAATTCAGACGGCATTCAGAACTGCCCTTGAGACTTGGTCATCCTGGATTGATACCAAAATTAACCGTAACAGGACGCGTGTTTTTTTCAGAACGTTTGAACCTTCTCATTGGAG : CAATTTAACTCAGCGGATGTGCAATGTGACAAATCAACCTCTTTCAGAGACTAATGGTCAGGAGAATAGCTCATTTTCTGATGCTGTACTAGAAGTGGCACACAGCATGAAAGTTCCAGTTAATGTGCTACACATAACTCCCATGTCCGCGTTCAGGAAAGATGCACATGTTGGTCTTTGGAGTGATAATCCATCTCTGTCTGATTGCAGCCACTGGTGTCTACCTGGACTTCCTGATCTTTGGAATGAAATGGTCTTCTCGTACCTGCATGATAGCTATCAACATACGTCATTGTATCAACAAAGAGA : ATTTAATTAGCTTGGACTGATGATGTATCA</gDNA_template>
            <first_frame> E  K  C  I  *  S  K  W  E  *  D  H  K  I  N  S  I  S  G  S  E  V  *  F  L  Q  F  H  C  R  I  L  S  I  C  I  P  C  P  T  Y  L  V  F  Q  I  W  N  K  E  S  *  I  N  P  Y  V  R  Q  A  *  *  Y  Q  R  *  V  D  Q  C  R  R  P  H  I  Q  F  W  T  V  V  G  T  W  E  A  F  W  S  :  G  V  L  F  P  S  K  *  Y  T  E  D  W  N  V  N  S  D  G  I  Q  N  C  P  *  D  L  V  I  L  D  *  Y  Q  N  *  P  *  Q  D  A  C  F  F  Q  N  V  *  T  F  S  L  E  :  Q  F  N  S  A  D  V  Q  C  D  K  S  T  S  F  R  D  *  W  S  G  E  *  L  I  F  *  C  C  T  R  S  G  T  Q  H  E  S  S  S  *  C  A  T  H  N  S  H  V  R  V  Q  E  R  C  T  C  W  S  L  E  *  *  S  I  S  V  *  L  Q  P  L  V  S  T  W  T  S  *  S  L  E  *  N  G  L  L  V  P  A  *  *  L  S  T  Y  V  I  V  S  T  K  R  :  I  *  L  A  W  T  D  D  V  S </first_frame>
            <second_frame>  R  S  V  Y  E  V  N  G  N  K  I  T  K  L  I  R  F  L  G  V  R  F  S  S  F  N  F  T  V  E  F  Y  R  S  V  F  L  V  Q  H  T  W  S  S  K  Y  G  I  K  R  V  R  S  T  L  T  L  D  K  L  D  D  I  S  D  E  W  I  N  A  D  V  L  I  F  N  S  G  Q  W  W  V  P  G  K  L  F  G  V :   G  C  Y  F  Q  V  N  S  T  L  R  I  G  M  S  I  Q  T  A  F  R  T  A  L  E  T  W  S  S  W  I  D  T  K  I  N  R  N  R  T  R  V  F  F  R  T  F  E  P  S  H  W  S :   N  L  T  Q  R  M  C  N  V  T  N  Q  P  L  S  E  T  N  G  Q  E  N  S  S  F  S  D  A  V  L  E  V  A  H  S  M  K  V  P  V  N  V  L  H  I  T  P  M  S  A  F  R  K  D  A  H  V  G  L  W  S  D  N  P  S  L  S  D  C  S  H  W  C  L  P  G  L  P  D  L  W  N  E  M  V  F  S  Y  L  H  D  S  Y  Q  H  T  S  L  Y  Q  Q  R  E :   F  N  *  L  G  L  M  M  Y   </second_frame>
            <third_frame>   E  V  Y  M  K  *  M  G  I  R  S  Q  N  *  F  D  F  W  E  *  G  L  V  P  S  I  S  L  S  N  F  I  D  L  Y  S  L  S  N  I  L  G  L  P  N  M  E  *  R  E  L  D  Q  P  L  R  *  T  S  L  M  I  S  A  M  S  G  S  M  Q  T  S  S  Y  S  I  L  D  S  G  G  Y  L  G  S  F  L  E   : W  G  A  I  S  K  *  I  V  H  *  G  L  E  C  Q  F  R  R  H  S  E  L  P  L  R  L  G  H  P  G  L  I  P  K  L  T  V  T  G  R  V  F  F  S  E  R  L  N  L  L  I  G   : A  I  *  L  S  G  C  A  M  *  Q  I  N  L  F  Q  R  L  M  V  R  R  I  A  H  F  L  M  L  Y  *  K  W  H  T  A  *  K  F  Q  L  M  C  Y  T  *  L  P  C  P  R  S  G  K  M  H  M  L  V  F  G  V  I  I  H  L  C  L  I  A  A  T  G  V  Y  L  D  F  L  I  F  G  M  K  W  S  S  R  T  C  M  I  A  I  N  I  R  H  C  I  N  K  E   : N  L  I  S  L  D  *  *  C  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116707" stop="116442"/>
                    <exon start="115567" stop="115409"/>
                    <exon start="114722" stop="114414"/>
                    <exon start="114177" stop="114168"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>741</number_coding_nucleotides>
                  <number_encoded_amino_acids>247</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RSVYEVNGNKITKLIRFLGVRFSSFNFTVEFYRSVFLVQHTWSSKYGIKRVRSTLTLDKLDDISDEWINADVLIFNSGQWWVPGKLFGVGCYFQVNSTLRIGMSIQTAFRTALETWSSWIDTKINRNRTRVFFRTFEPSHWSNLTQRMCNVTNQPLSETNGQENSSFSDAVLEVAHSMKVPVNVLHITPMSAFRKDAHVGLWSDNPSLSDCSHWCLPGLPDLWNEMVFSYLHDSYQHTSLYQQREFN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="116763" e_stop="116442"/>
            <exon e_start="115567" e_stop="115329"/>
            <exon e_start="114722" e_stop="114666"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.978" acc_prob="0.990" e_score="0.969"/>
          <exon-intron don_prob="0.886" acc_prob="0.976" e_score="0.967"/>
          <exon-only e_score="0.772"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.969">
            <gDNA_exon_boundary e_start="116763" e_stop="116442" e_length="322"/>
          </exon>
          <intron i_serial="1" don_prob="0.978" acc_prob="0.990">
            <gDNA_intron_boundary i_start="116441" i_stop="115568" i_length="874"/>
          </intron>
          <exon e_serial="2" e_score="0.967">
            <gDNA_exon_boundary e_start="115567" e_stop="115329" e_length="239"/>
          </exon>
          <intron i_serial="2" don_prob="0.886" acc_prob="0.976">
            <gDNA_intron_boundary i_start="115328" i_stop="114723" i_length="606"/>
          </intron>
          <exon e_serial="3" e_score="0.772">
            <gDNA_exon_boundary e_start="114722" e_stop="114666" e_length="57"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="116763" stop="116442"/>
              <exon start="115567" stop="115329"/>
              <exon start="114722" stop="114666"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E604090" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAGGACTCAATGGGAGTCTTTGATATGCCTTCTAATGACAGGGGTGCAAGATAAGAGAAGTGTATATGAAGTAAATGGGAATAAGATCACAAAATTAATTCGATTTCTGGGAGTGAGGTTTAGTTCCTTCAATTTCACTGTCGAATTTTATCGATCTGTATTCCTTGTCCAACATACTTGGTCTTCCAAATATGGAATAAAGAGAGTTAGATCAACCCTTACGTTAGACAAGCTTGATGATATCAGCGATGAGTGGATCAATGCAGACGTCCTCATATTCAATTCTGGACAGTGGTGGGTACCTGGGAAGCTTTTTGGAGT : GGGGTGCTATTTCCAAGTAAATAGTACACTGAGGATTGGAATGTCAATTCAGACGGCATTCAGAACTGCCCTTGAGACTTGGTCATCCTGGATTGATACCAAAATTAACCGTAACAGGACGCGTGTTTTTTTCAGAACGTTTGAACCTTCTCATTGGAGGTACTTGTTGATAGCTATGCCTTCTATACAGATGAATGCTTTTGGATCTCTCAGTAGAAAGTTTCTACAAATTGGAGCTG : CAATTTAACTCAGCGGATGTGCAATGTGACAAATCAACCTCTTTCAGAGACTAATGG</gDNA_template>
            <first_frame> V  G  L  N  G  S  L  *  Y  A  F  *  *  Q  G  C  K  I  R  E  V  Y  M  K  *  M  G  I  R  S  Q  N  *  F  D  F  W  E  *  G  L  V  P  S  I  S  L  S  N  F  I  D  L  Y  S  L  S  N  I  L  G  L  P  N  M  E  *  R  E  L  D  Q  P  L  R  *  T  S  L  M  I  S  A  M  S  G  S  M  Q  T  S  S  Y  S  I  L  D  S  G  G  Y  L  G  S  F  L  E   : W  G  A  I  S  K  *  I  V  H  *  G  L  E  C  Q  F  R  R  H  S  E  L  P  L  R  L  G  H  P  G  L  I  P  K  L  T  V  T  G  R  V  F  F  S  E  R  L  N  L  L  I  G  G  T  C  *  *  L  C  L  L  Y  R  *  M  L  L  D  L  S  V  E  S  F  Y  K  L  E  L  :  Q  F  N  S  A  D  V  Q  C  D  K  S  T  S  F  R  D  *  W </first_frame>
            <second_frame>  *  D  S  M  G  V  F  D  M  P  S  N  D  R  G  A  R  *  E  K  C  I  *  S  K  W  E  *  D  H  K  I  N  S  I  S  G  S  E  V  *  F  L  Q  F  H  C  R  I  L  S  I  C  I  P  C  P  T  Y  L  V  F  Q  I  W  N  K  E  S  *  I  N  P  Y  V  R  Q  A  *  *  Y  Q  R  *  V  D  Q  C  R  R  P  H  I  Q  F  W  T  V  V  G  T  W  E  A  F  W  S  :  G  V  L  F  P  S  K  *  Y  T  E  D  W  N  V  N  S  D  G  I  Q  N  C  P  *  D  L  V  I  L  D  *  Y  Q  N  *  P  *  Q  D  A  C  F  F  Q  N  V  *  T  F  S  L  E  V  L  V  D  S  Y  A  F  Y  T  D  E  C  F  W  I  S  Q  *  K  V  S  T  N  W  S  C :   N  L  T  Q  R  M  C  N  V  T  N  Q  P  L  S  E  T  N   </second_frame>
            <third_frame>   R  T  Q  W  E  S  L  I  C  L  L  M  T  G  V  Q  D  K  R  S  V  Y  E  V  N  G  N  K  I  T  K  L  I  R  F  L  G  V  R  F  S  S  F  N  F  T  V  E  F  Y  R  S  V  F  L  V  Q  H  T  W  S  S  K  Y  G  I  K  R  V  R  S  T  L  T  L  D  K  L  D  D  I  S  D  E  W  I  N  A  D  V  L  I  F  N  S  G  Q  W  W  V  P  G  K  L  F  G  V :   G  C  Y  F  Q  V  N  S  T  L  R  I  G  M  S  I  Q  T  A  F  R  T  A  L  E  T  W  S  S  W  I  D  T  K  I  N  R  N  R  T  R  V  F  F  R  T  F  E  P  S  H  W  R  Y  L  L  I  A  M  P  S  I  Q  M  N  A  F  G  S  L  S  R  K  F  L  Q  I  G  A   : A  I  *  L  S  G  C  A  M  *  Q  I  N  L  F  Q  R  L  M  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="116761" stop="116442"/>
                    <exon start="115567" stop="115329"/>
                    <exon start="114722" stop="114715"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>564</number_coding_nucleotides>
                  <number_encoded_amino_acids>188</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RTQWESLICLLMTGVQDKRSVYEVNGNKITKLIRFLGVRFSSFNFTVEFYRSVFLVQHTWSSKYGIKRVRSTLTLDKLDDISDEWINADVLIFNSGQWWVPGKLFGVGCYFQVNSTLRIGMSIQTAFRTALETWSSWIDTKINRNRTRVFFRTFEPSHWRYLLIAMPSIQMNAFGSLSRKFLQIGAAI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="123408" PGL_stop="123008"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="123408" e_stop="123008"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="123408" e_stop="123008" e_length="401"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="123408" stop="123008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310356" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATTTGGCCTAGTTTTCCTCTTCAAAACCCTCAACACCATCACCTTCCCTCCTCCTCAACCCAACAACAACAACAACAACAAGAAGAAGTAGTAGTTGTCCCTTTTGATCATGTGTTAAACAACCATGTTCAAACCCTAATAGAGGATCAAGAACACGATGATCAAGACGAAGATGAAGAGGAAGAAGAAGAGCTAGGAGCCATGAAAGAAATGATGTTCAAAATTGCATCTATGCAACCAGTAGACATTGATCCATCCACTATACGAAAACCTAAAAGGCGTAACGTACGTATAAGCAATGATCCACAAAGCGTAGCAGCCAGGCTACGCCGCGAAAGGATAAGTGAAAAAATCAGAATCTTGCAAAGATTAGTCCCTGGTGGAACAAAAATGGACACT</gDNA_template>
            <first_frame> L  F  G  L  V  F  L  F  K  T  L  N  T  I  T  F  P  P  P  Q  P  N  N  N  N  N  N  K  K  K  *  *  L  S  L  L  I  M  C  *  T  T  M  F  K  P  *  *  R  I  K  N  T  M  I  K  T  K  M  K  R  K  K  K  S  *  E  P  *  K  K  *  C  S  K  L  H  L  C  N  Q  *  T  L  I  H  P  L  Y  E  N  L  K  G  V  T  Y  V  *  A  M  I  H  K  A  *  Q  P  G  Y  A  A  K  G  *  V  K  K  S  E  S  C  K  D  *  S  L  V  E  Q  K  W  T   </first_frame>
            <second_frame>  Y  L  A  *  F  S  S  S  K  P  S  T  P  S  P  S  L  L  L  N  P  T  T  T  T  T  T  R  R  S  S  S  C  P  F  *  S  C  V  K  Q  P  C  S  N  P  N  R  G  S  R  T  R  *  S  R  R  R  *  R  G  R  R  R  A  R  S  H  E  R  N  D  V  Q  N  C  I  Y  A  T  S  R  H  *  S  I  H  Y  T  K  T  *  K  A  *  R  T  Y  K  Q  *  S  T  K  R  S  S  Q  A  T  P  R  K  D  K  *  K  N  Q  N  L  A  K  I  S  P  W  W  N  K  N  G  H  </second_frame>
            <third_frame>   I  W  P  S  F  P  L  Q  N  P  Q  H  H  H  L  P  S  S  S  T  Q  Q  Q  Q  Q  Q  Q  E  E  V  V  V  V  P  F  D  H  V  L  N  N  H  V  Q  T  L  I  E  D  Q  E  H  D  D  Q  D  E  D  E  E  E  E  E  E  L  G  A  M  K  E  M  M  F  K  I  A  S  M  Q  P  V  D  I  D  P  S  T  I  R  K  P  K  R  R  N  V  R  I  S  N  D  P  Q  S  V  A  A  R  L  R  R  E  R  I  S  E  K  I  R  I  L  Q  R  L  V  P  G  G  T  K  M  D  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="123406" stop="123008"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWPSFPLQNPQHHHLPSSSTQQQQQQQEEVVVVPFDHVLNNHVQTLIEDQEHDDQDEDEEEEEELGAMKEMMFKIASMQPVDIDPSTIRKPKRRNVRISNDPQSVAARLRRERISEKIRILQRLVPGGTKMDT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="+" PGL_start="153785" PGL_stop="155917"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="153785" e_stop="154756"/>
            <exon e_start="155321" e_stop="155917"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.965" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="153785" e_stop="154756" e_length="972"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.965">
            <gDNA_intron_boundary i_start="154757" i_stop="155320" i_length="564"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="155321" e_stop="155917" e_length="597"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="153785" stop="154467"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317306" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="154370" stop="154756"/>
              <exon start="155321" stop="155658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434850" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="154370" stop="154756"/>
              <exon start="155321" stop="155340"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E409290" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="154519" stop="154756"/>
              <exon start="155321" stop="155599"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395606" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="154520" stop="154756"/>
              <exon start="155321" stop="155622"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E205803" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="155389" stop="155917"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E207924" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TATTCCGAAAATTTAAGCTTCTGTTCATTTCCATGGCTTCCTTTTTCACACTCACTATCTTCTCCTTAATCCTCTTCTTCTCTATTTCCTCCGCCGCTCGCCACCATTCCTCCACATCCCCGTCAATTTCACTTCAGATCCGTGGTGCTTGTAAGGCTTCACGGGACCCACCAACATGTGAATCTGTATTGACGGATTCCGGTTACTTACCGTCTGAGCTAACGACGTCGTTGATCATCCAATCGGCTGTTAAAGTATCATCGAAGAACAACGATAAGGCGAAAGAGATGGTGCAGGCAATTATAGATGCGTCGACAGGGAATAATCAGAACCGTACGGACGCTGGGAAAGTGTGTATGGAGGTGCTCGGGTATGCGGAGTATCGGGTCGGGTTAACGGGTCAGGCAGTGATTAACGGCGGATACAAGAGCGCTCGTGCATGGATGAGCTCCGTTATGGTGTATCAATACGACTGCTGGTCCGCTTTGAAGTACGTTAATGGCACCTCCCAGGTATCTAAAACGATGTCGTTTATCAATTCCTTGATCGGATACAGCAGCAATGCATTGGGGATGATGGTGAATTTCGACCTTTACGGTGCTGATACCGGGTCATGGACCGTACCCAAAACAGAACGAGACGGGTTCTGGGAAGGTTCGGGTTCGGGTTCAAGCGGGTCGGGTCAGGTGAAGGGTGGAGTGCCGACCGGGTTGAAACCGGATGTAACGGTGTGTAAGGAAGGAGGATGTGACTATAAGACGGTGCAGGAGGCGGTGAATGCTGCACCGGAGAAGGAGCAAACCCGGAAGTTTGTGATATGGATCAAATCCGGGTTGTATGAGGAGAAGGTTCGGGTCGGGTTGGAGAAGATGAATGTGGTGTTTTTGGGTGATGGAATGGGTAAAACTGTCATTACGGGTTCGTTGAGTGTTGGTCTTGCTGGTGTTACTACTTATGAGACTGCAACTGTTG : GAGTTGTTGGTGATGGATTCATGGCTAGTGGTATCACCTTCCAAAACACAGCCGGTCCGGATGCTCACCAAGCCGTAGCATTCCGATCCGACAGTGATCTTTCCGCTGTAGAAAACTGTGAATTCATTGGCAATCAAGACACCCTATACGCCCACGCTTTGCGCCAATACTACAAGTCCTGCCGTATCCAAGGTAATGTAGACTTCATTTTCGGAAACTCAGCTTCTTTCTTTCAAGACTGTGACATCCTAATAGCACCTCGACAACTCCGTCCTGAAAAGGGAGAGACGAATGCTGTGACTGCTCATGGCAGGATAGACCCTGCACAATCAACTGGTTTCGTCTTCCAAAATTGTTTGATCAATGGAACTGATAAATACATGACCTTGTACTACAACAAACCCAAAGTCCACAAAAATTTTCTGGGAAGACCATGGAAGGAGTATTCTCGGACCGTGTTTCTAGATTGTACTTTAGAGGCTCTTATATCGCCTAACGGATGGTTGCCTTGGAGTGGTGATTTCGCGTTGAAGACTCTATACTACGGAGAATATAGAAATACTGGTGCCGGAGCTAATACAGCAGGACGAGTGTCGT</gDNA_template>
            <first_frame> Y  S  E  N  L  S  F  C  S  F  P  W  L  P  F  S  H  S  L  S  S  P  *  S  S  S  S  L  F  P  P  P  L  A  T  I  P  P  H  P  R  Q  F  H  F  R  S  V  V  L  V  R  L  H  G  T  H  Q  H  V  N  L  Y  *  R  I  P  V  T  Y  R  L  S  *  R  R  R  *  S  S  N  R  L  L  K  Y  H  R  R  T  T  I  R  R  K  R  W  C  R  Q  L  *  M  R  R  Q  G  I  I  R  T  V  R  T  L  G  K  C  V  W  R  C  S  G  M  R  S  I  G  S  G  *  R  V  R  Q  *  L  T  A  D  T  R  A  L  V  H  G  *  A  P  L  W  C  I  N  T  T  A  G  P  L  *  S  T  L  M  A  P  P  R  Y  L  K  R  C  R  L  S  I  P  *  S  D  T  A  A  M  H  W  G  *  W  *  I  S  T  F  T  V  L  I  P  G  H  G  P  Y  P  K  Q  N  E  T  G  S  G  K  V  R  V  R  V  Q  A  G  R  V  R  *  R  V  E  C  R  P  G  *  N  R  M  *  R  C  V  R  K  E  D  V  T  I  R  R  C  R  R  R  *  M  L  H  R  R  R  S  K  P  G  S  L  *  Y  G  S  N  P  G  C  M  R  R  R  F  G  S  G  W  R  R  *  M  W  C  F  W  V  M  E  W  V  K  L  S  L  R  V  R  *  V  L  V  L  L  V  L  L  L  M  R  L  Q  L  L  :  E  L  L  V  M  D  S  W  L  V  V  S  P  S  K  T  Q  P  V  R  M  L  T  K  P  *  H  S  D  P  T  V  I  F  P  L  *  K  T  V  N  S  L  A  I  K  T  P  Y  T  P  T  L  C  A  N  T  T  S  P  A  V  S  K  V  M  *  T  S  F  S  E  T  Q  L  L  S  F  K  T  V  T  S  *  *  H  L  D  N  S  V  L  K  R  E  R  R  M  L  *  L  L  M  A  G  *  T  L  H  N  Q  L  V  S  S  S  K  I  V  *  S  M  E  L  I  N  T  *  P  C  T  T  T  N  P  K  S  T  K  I  F  W  E  D  H  G  R  S  I  L  G  P  C  F  *  I  V  L  *  R  L  L  Y  R  L  T  D  G  C  L  G  V  V  I  S  R  *  R  L  Y  T  T  E  N  I  E  I  L  V  P  E  L  I  Q  Q  D  E  C  R </first_frame>
            <second_frame>  I  P  K  I  *  A  S  V  H  F  H  G  F  L  F  H  T  H  Y  L  L  L  N  P  L  L  L  Y  F  L  R  R  S  P  P  F  L  H  I  P  V  N  F  T  S  D  P  W  C  L  *  G  F  T  G  P  T  N  M  *  I  C  I  D  G  F  R  L  L  T  V  *  A  N  D  V  V  D  H  P  I  G  C  *  S  I  I  E  E  Q  R  *  G  E  R  D  G  A  G  N  Y  R  C  V  D  R  E  *  S  E  P  Y  G  R  W  E  S  V  Y  G  G  A  R  V  C  G  V  S  G  R  V  N  G  S  G  S  D  *  R  R  I  Q  E  R  S  C  M  D  E  L  R  Y  G  V  S  I  R  L  L  V  R  F  E  V  R  *  W  H  L  P  G  I  *  N  D  V  V  Y  Q  F  L  D  R  I  Q  Q  Q  C  I  G  D  D  G  E  F  R  P  L  R  C  *  Y  R  V  M  D  R  T  Q  N  R  T  R  R  V  L  G  R  F  G  F  G  F  K  R  V  G  S  G  E  G  W  S  A  D  R  V  E  T  G  C  N  G  V  *  G  R  R  M  *  L  *  D  G  A  G  G  G  E  C  C  T  G  E  G  A  N  P  E  V  C  D  M  D  Q  I  R  V  V  *  G  E  G  S  G  R  V  G  E  D  E  C  G  V  F  G  *  W  N  G  *  N  C  H  Y  G  F  V  E  C  W  S  C  W  C  Y  Y  L  *  D  C  N  C  W :   S  C  W  *  W  I  H  G  *  W  Y  H  L  P  K  H  S  R  S  G  C  S  P  S  R  S  I  P  I  R  Q  *  S  F  R  C  R  K  L  *  I  H  W  Q  S  R  H  P  I  R  P  R  F  A  P  I  L  Q  V  L  P  Y  P  R  *  C  R  L  H  F  R  K  L  S  F  F  L  S  R  L  *  H  P  N  S  T  S  T  T  P  S  *  K  G  R  D  E  C  C  D  C  S  W  Q  D  R  P  C  T  I  N  W  F  R  L  P  K  L  F  D  Q  W  N  *  *  I  H  D  L  V  L  Q  Q  T  Q  S  P  Q  K  F  S  G  K  T  M  E  G  V  F  S  D  R  V  S  R  L  Y  F  R  G  S  Y  I  A  *  R  M  V  A  L  E  W  *  F  R  V  E  D  S  I  L  R  R  I  *  K  Y  W  C  R  S  *  Y  S  R  T  S  V   </second_frame>
            <third_frame>   F  R  K  F  K  L  L  F  I  S  M  A  S  F  F  T  L  T  I  F  S  L  I  L  F  F  S  I  S  S  A  A  R  H  H  S  S  T  S  P  S  I  S  L  Q  I  R  G  A  C  K  A  S  R  D  P  P  T  C  E  S  V  L  T  D  S  G  Y  L  P  S  E  L  T  T  S  L  I  I  Q  S  A  V  K  V  S  S  K  N  N  D  K  A  K  E  M  V  Q  A  I  I  D  A  S  T  G  N  N  Q  N  R  T  D  A  G  K  V  C  M  E  V  L  G  Y  A  E  Y  R  V  G  L  T  G  Q  A  V  I  N  G  G  Y  K  S  A  R  A  W  M  S  S  V  M  V  Y  Q  Y  D  C  W  S  A  L  K  Y  V  N  G  T  S  Q  V  S  K  T  M  S  F  I  N  S  L  I  G  Y  S  S  N  A  L  G  M  M  V  N  F  D  L  Y  G  A  D  T  G  S  W  T  V  P  K  T  E  R  D  G  F  W  E  G  S  G  S  G  S  S  G  S  G  Q  V  K  G  G  V  P  T  G  L  K  P  D  V  T  V  C  K  E  G  G  C  D  Y  K  T  V  Q  E  A  V  N  A  A  P  E  K  E  Q  T  R  K  F  V  I  W  I  K  S  G  L  Y  E  E  K  V  R  V  G  L  E  K  M  N  V  V  F  L  G  D  G  M  G  K  T  V  I  T  G  S  L  S  V  G  L  A  G  V  T  T  Y  E  T  A  T  V   : G  V  V  G  D  G  F  M  A  S  G  I  T  F  Q  N  T  A  G  P  D  A  H  Q  A  V  A  F  R  S  D  S  D  L  S  A  V  E  N  C  E  F  I  G  N  Q  D  T  L  Y  A  H  A  L  R  Q  Y  Y  K  S  C  R  I  Q  G  N  V  D  F  I  F  G  N  S  A  S  F  F  Q  D  C  D  I  L  I  A  P  R  Q  L  R  P  E  K  G  E  T  N  A  V  T  A  H  G  R  I  D  P  A  Q  S  T  G  F  V  F  Q  N  C  L  I  N  G  T  D  K  Y  M  T  L  Y  Y  N  K  P  K  V  H  K  N  F  L  G  R  P  W  K  E  Y  S  R  T  V  F  L  D  C  T  L  E  A  L  I  S  P  N  G  W  L  P  W  S  G  D  F  A  L  K  T  L  Y  Y  G  E  Y  R  N  T  G  A  G  A  N  T  A  G  R  V  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C11HBa0054I23.1" strand="+"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="153787" stop="154756"/>
                    <exon start="155321" stop="155916"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1566</number_coding_nucleotides>
                  <number_encoded_amino_acids>522</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FRKFKLLFISMASFFTLTIFSLILFFSISSAARHHSSTSPSISLQIRGACKASRDPPTCESVLTDSGYLPSELTTSLIIQSAVKVSSKNNDKAKEMVQAIIDASTGNNQNRTDAGKVCMEVLGYAEYRVGLTGQAVINGGYKSARAWMSSVMVYQYDCWSALKYVNGTSQVSKTMSFINSLIGYSSNALGMMVNFDLYGADTGSWTVPKTERDGFWEGSGSGSSGSGQVKGGVPTGLKPDVTVCKEGGCDYKTVQEAVNAAPEKEQTRKFVIWIKSGLYEEKVRVGLEKMNVVFLGDGMGKTVITGSLSVGLAGVTTYETATVGVVGDGFMASGITFQNTAGPDAHQAVAFRSDSDLSAVENCEFIGNQDTLYAHALRQYYKSCRIQGNVDFIFGNSASFFQDCDILIAPRQLRPEKGETNAVTAHGRIDPAQSTGFVFQNCLINGTDKYMTLYYNKPKVHKNFLGRPWKEYSRTVFLDCTLEALISPNGWLPWSGDFALKTLYYGEYRNTGAGANTAGRVS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="-" PGL_start="156261" PGL_stop="156082"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="156261" e_stop="156082"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.944"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.944">
            <gDNA_exon_boundary e_start="156261" e_stop="156082" e_length="180"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="156261" stop="156082"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E395605" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TATAAGACTTTAGCAATATATAACTCATATTATAACAAGTTTCAAAATTTTCCAACAATTTGGTACAAGAGGTTATATATTGATTTTTTTCAAGAAAAAAAAAACGATCGGGGTAGGTATAGGGGGAGGGGATTACATAACAATGTGGAGAATCGAAACGATATGATGCGAGTTCAGATA</gDNA_template>
            <first_frame> Y  K  T  L  A  I  Y  N  S  Y  Y  N  K  F  Q  N  F  P  T  I  W  Y  K  R  L  Y  I  D  F  F  Q  E  K  K  N  D  R  G  R  Y  R  G  R  G  L  H  N  N  V  E  N  R  N  D  M  M  R  V  Q  I </first_frame>
            <second_frame>  I  R  L  *  Q  Y  I  T  H  I  I  T  S  F  K  I  F  Q  Q  F  G  T  R  G  Y  I  L  I  F  F  K  K  K  K  T  I  G  V  G  I  G  G  G  D  Y  I  T  M  W  R  I  E  T  I  *  C  E  F  R   </second_frame>
            <third_frame>   *  D  F  S  N  I  *  L  I  L  *  Q  V  S  K  F  S  N  N  L  V  Q  E  V  I  Y  *  F  F  S  R  K  K  K  R  S  G  *  V  *  G  E  G  I  T  *  Q  C  G  E  S  K  R  Y  D  A  S  S  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C11HBa0054I23.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 171 chains have been computed
$ 
$ memory statistics:
$ 188312 bytes spliced alignments in total
$ 87 spliced alignments have been stored
$ 2164 bytes was the average size of a spliced alignment
$ 29864 bytes predicted gene locations in total
$ 20 predicted gene locations have been stored
$ 1493 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 199 backtrace matrices have been allocated
$ 
$ date finished: 2008-03-10 20:48:38
-->
