SW perc perc perc query position in query matching repeat position in repeat score div. del. ins. sequence begin end (left) repeat class/family begin end (left) ID 1703 26.7 3.5 3.0 C10HBa0053L19.1 393 1001 (136765) C Copia00215 Copia (120) 4432 3821 1 234 30.8 0.8 4.1 C10HBa0053L19.1 914 1035 (136731) + Copia00009 Copia 766 883 (3964) 2 * 294 29.7 3.6 0.0 C10HBa0053L19.1 1203 1313 (136453) C Copia00149 Copia (1212) 13271 13157 3 12341 15.5 3.3 1.1 C10HBa0053L19.1 1315 3523 (134243) C TORTL1 Unknown (5) 9690 7433 4 456 6.5 1.6 0.0 C10HBa0053L19.1 3521 3582 (134184) + Copia00022 Copia 7397 7459 (0) 5 * 59558 4.9 1.1 0.6 C10HBa0053L19.1 4300 11722 (126044) + Copia00022 Copia 1 7459 (0) 6 48566 12.2 1.5 0.7 C10HBa0053L19.1 12434 19814 (117952) C TORTL1 Unknown (2257) 7438 1 4 5762 32.2 3.1 3.2 C10HBa0053L19.1 20047 23277 (114489) C Copia00215 Copia (1323) 3229 1 7 379 20.6 1.1 0.0 C10HBa0053L19.1 27206 27297 (110469) + Gypsy00202 Gypsy 2310 2402 (12033) 8 1012 9.7 2.1 0.0 C10HBa0053L19.1 27307 27451 (110315) + Unknown00034 Unknown 3874 4021 (5056) 9 1018 20.2 4.6 0.8 C10HBa0053L19.1 28922 29161 (108605) + SONATA2 Unknown 1 249 (4) 10 263 27.8 0.0 0.0 C10HBa0053L19.1 29163 29234 (108532) C TLP2 Unknown (0) 306 235 11 * 905 20.1 5.8 0.9 C10HBa0053L19.1 29234 29459 (108307) + TLP2 Unknown 41 277 (29) 12 254 18.3 9.8 1.6 C10HBa0053L19.1 32541 32601 (105165) + Gypsy00009 Gypsy 5861 5926 (62) 13 365 0.0 0.0 0.0 C10HBa0053L19.1 33733 33805 (103961) + GYCUME1_LTR Unknown 362 434 (2212) 14 290 7.1 0.0 0.0 C10HBa0053L19.1 33747 33816 (103950) + Copia00181 Copia 1816 1885 (351) 15 * 567 20.7 2.0 7.0 C10HBa0053L19.1 33865 34108 (103658) C Unknown00025 Unknown (5826) 482 251 16 251 21.6 10.9 6.1 C10HBa0053L19.1 34413 34659 (103107) + Unknown00019 Unknown 448 706 (13927) 17 886 19.7 3.2 0.0 C10HBa0053L19.1 35297 35484 (102282) C Unknown00046 Unknown (7971) 2073 1880 18 330 21.5 0.0 0.0 C10HBa0053L19.1 44682 44746 (93020) + Gypsy00041 Gypsy 3679 3743 (1138) 19 2439 28.5 4.3 2.3 C10HBa0053L19.1 45335 46417 (91349) C ENSPM_MT Unknown (4533) 3620 2229 20 557 17.7 3.0 0.8 C10HBa0053L19.1 47181 47311 (90455) + Unknown00034 Unknown 3704 3837 (5240) 21 539 24.7 1.2 2.9 C10HBa0053L19.1 47782 47952 (89814) + Unknown00034 Unknown 3882 4049 (5028) 21 576 11.7 3.9 0.0 C10HBa0053L19.1 51531 51633 (86133) C Unknown00030 Unknown (84) 1382 1276 22 679 7.5 1.8 2.8 C10HBa0053L19.1 52103 52211 (85555) + Unknown00030 Unknown 1276 1383 (83) 23 294 10.9 0.9 13.2 C10HBa0053L19.1 53114 53219 (84547) + Copia00005 Copia 1 93 (4798) 24 330 24.7 0.0 0.0 C10HBa0053L19.1 53584 53664 (84102) + Unknown00043 Unknown 5319 5399 (5925) 25 38964 4.3 0.2 0.1 C10HBa0053L19.1 54341 59053 (78713) C Copia00003 Copia (96) 4718 1 26 4628 5.7 0.7 0.3 C10HBa0053L19.1 59032 59627 (78139) C Copia00003 Copia (75) 4739 4142 26 * 266 3.6 0.0 1.8 C10HBa0053L19.1 59651 59707 (78059) C Unknown00037 Unknown (271) 4568 4513 27 * 434 6.7 0.0 0.0 C10HBa0053L19.1 59662 59751 (78015) + HELITRON7_OS Unknown 1599 1688 (8465) 28 295 14.9 0.0 5.3 C10HBa0053L19.1 59752 59774 (77992) + Copia00181 Copia 1816 1922 (314) 29 324 9.8 0.0 1.9 C10HBa0053L19.1 62650 62701 (75065) + Copia00039 Copia 264 314 (4236) 30 943 16.9 0.6 0.0 C10HBa0053L19.1 62878 63055 (74711) C Copia00039 Copia (4109) 441 263 31 1823 11.5 2.4 6.7 C10HBa0053L19.1 64010 64383 (73383) C TLC1_LTR Unknown (0) 579 222 32 * 8567 28.1 3.2 3.4 C10HBa0053L19.1 64060 67432 (70334) C Copia00003 Copia (105) 4709 1345 33 * 23539 6.1 0.3 0.1 C10HBa0053L19.1 64641 67642 (70124) + Copia00010 Copia 1 3008 (1190) 34 * 38585 8.0 1.4 1.7 C10HBa0053L19.1 67634 73959 (63807) C Gypsy00047 Gypsy (0) 9326 258 35 9686 7.1 2.5 1.6 C10HBa0053L19.1 73939 75278 (62488) C Gypsy00183 Gypsy (74) 6748 5398 36 * 10132 8.9 0.4 0.1 C10HBa0053L19.1 75279 76648 (61118) + Copia00185 Copia 2991 4365 (2) 37 1904 10.3 2.2 5.4 C10HBa0053L19.1 76392 76761 (61005) C TLC1_LTR Unknown (0) 579 222 38 * 1241 21.1 9.4 2.6 C10HBa0053L19.1 76442 76825 (60941) C Copia00003 Copia (105) 4709 4300 39 * 416 21.5 3.3 6.0 C10HBa0053L19.1 77194 77376 (60390) + ALIEN1_CA Unknown 1 178 (93) 40 5497 32.3 4.8 3.6 C10HBa0053L19.1 78668 82542 (55224) C ATCOPIA31_I Unknown (92) 3992 73 41 747 18.6 16.2 3.5 C10HBa0053L19.1 87553 87781 (49985) + Unknown00046 Unknown 242 499 (9545) 42 505 23.2 4.1 4.1 C10HBa0053L19.1 87643 87813 (49953) C Unknown00034 Unknown (5235) 3842 3672 43 * 1347 19.9 9.8 0.0 C10HBa0053L19.1 88760 89055 (48711) + Unknown00034 Unknown 3704 4028 (5049) 44 414 25.8 5.2 0.0 C10HBa0053L19.1 96967 97063 (40703) + TS Unknown 57 158 (3) 45 1499 15.8 4.6 0.3 C10HBa0053L19.1 101597 101881 (35885) + Unknown00034 Unknown 3702 3998 (5079) 46 333 22.5 7.5 6.0 C10HBa0053L19.1 102352 102550 (35216) + Unknown00050 Unknown 3674 3875 (1756) 47 4461 11.5 3.3 0.3 C10HBa0053L19.1 115338 116037 (21729) C Copia00003 Copia (97) 4717 3997 48 * 19938 10.3 1.7 0.1 C10HBa0053L19.1 116030 118897 (18869) + Copia00003 Copia 1766 4678 (136) 49 304 24.0 9.3 6.0 C10HBa0053L19.1 122624 122805 (14961) C Unknown00057 Unknown (3028) 598 411 50 257 10.6 6.1 0.0 C10HBa0053L19.1 127916 127981 (9785) + Gypsy00178 Gypsy 6510 6579 (2512) 51 1354 12.6 4.7 0.4 C10HBa0053L19.1 129756 129987 (7779) + SONATA2 Unknown 1 242 (11) 52 465 15.8 0.0 0.0 C10HBa0053L19.1 133524 133605 (4161) C Copia00033 Copia (4049) 388 307 53 * 23377 5.0 0.4 0.9 C10HBa0053L19.1 133599 137766 (0) C Copia00112 Copia (1) 5247 906 54