<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-15 12:54:44"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E713530" ref_strand="+" ref_description="SGN-E713530 [FB08DE11]">
      <seq>cgcttgacgacgagaagaaattctggcattcccacttgtacgaggtgaaaagtggtgtcttgttcatgcccggtgttccaggcccgattcaacgacaagatcatgaaaaaacggtgaaaacttatggcaaagtgatacatttctggcaggttgatagaggtgatacacttcctttgggaattcctcaagttatgatggcgcttactagagatggtcaactcgatcagaaccttgttcaagatgtggagaagcgttttggtgtgtcctttgatgaagaaagggagaaaagggcatatatggaaggtccgtcccatggggttcacccacttgctaatgctggaggcaaaggcattcgcactgtccttagagaagttgattgtaaacctatcgaatctgtccctagagtttttgtttaagcttaggttcatttcgttttgcgtttattttgttcaaaataaaattttacttttgtgacaggacttgtatatgtatatgtttcgagtgttggtgaatgaataattcccctcttctatgtttatgtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="4857" stop="3517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4558" g_stop="4319" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="240" r_length="240" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4126" g_stop="3814" g_length="313"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="553" r_length="313" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E713530" ref_strand="+">
        <total_alignment_score>0.984</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E713530" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4558" e_stop="4319"/>
          <exon e_start="4126" e_stop="3814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAGGTACACAAATCATTAATAAAAAAACCCTTTAACTTGATGTGACTTGGCTTTAGATGTGTACAAGTATATATTGAACAAAACAAATTGTCCTACATGCCTACATAAAAATTGTGTGTGTTATGTAGCGACATCCACATGTTCAATTTTATTTGTTATATTTTTACGTCTTTTAAAAAATAAAATTGGATGTAGATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAATAATTCCCCTCTTCTATGTTTATGTAATCAAATACTG</genome_strand>
        <mrna_strand>CGCTTGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG................................................................................................................................................................................................ATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAATAATTCCCCTCTTCTATGTTTATGTAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E699586" ref_strand="+" ref_description="SGN-E699586 [FA10CD09]">
      <seq>gatcaacacaacaaaattctgattttttctttgaaattttagagaaaaaaaaagatggaaggcataaatatatcgactcatccagatgttccaggtgaacctacgcagacaggaacatcaattcttgagactgcaacagctactattcaaggatttggtcctatcaacaaaattcatcaacatctttgcgcgttccatttctacggacacgacatgacacggcaagtggaggcgcaccacttctgtggacaccaaaatgaagagttcaggcagtgtctcatttacgacaggcctgatgccgatgctcgtctaatcgggctcgagtacatcgtatcggaggagctgttcttgacattgccagacgacgagaagaaattctggcattcccacttgtacgaggtgaaaagtggtgtcttgttcatgcccggtgttccaggcccgattcaacgacaagatcatgaaaaaacggtgaaaacttatggcaaagtgatacatttctggcaggttgatagaggtgatacacttcctttgggaattcctcaagttatgatggcgcttactagagatggtcaactcgatcagaaccttgttcaagatgtggagaagcgttttggtgtgtcctttgatgaagaaagggagaanagggcatatatggaaggtccgtcccatggggttcacccacttgctaatgctggaggcaaaggcattcgcactgtccttagagaagttgattgtaaacctatcgaatctgtccctagagtttttgtttaagcttaagttcatttcgttttgcgtttaatttgttcaaaataaaattttacttttgtgacaggacttgaatatgtatatgtttcgagggttggggaaatgaataatccccctcctctatgtttatgaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="5622" stop="3517"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5322" g_stop="5132" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="191" r_length="191" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5131" i_stop="4723" i_length="409">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.778" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4722" g_stop="4319" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="192" r_stop="595" r_length="404" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4126" g_stop="3816" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="907" r_length="312" r_score="0.952"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E699586" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>906</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E699586" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5322" e_stop="5132"/>
          <exon e_start="4722" e_stop="4319"/>
          <exon e_start="4126" e_stop="3816"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGCGTTAAGTTTCTATTATTCTATCCTTCGTTTTTTTATTATAACTAAATTTATAGCACTGATAACGCTAGTGGCGAATTTAAAATTTTTAATATATTAGGGTTATAGGTGGATATATTTATTTTGAGACGAGAGTAGATTGATATGTGTTATAAGTTACTCGTGAACAAAGCTGGACAATAGGAGTTTGGGGTAAAAAATAAGAACATTTAACTTCTGCACCATCAGAAGAAAAGTGAGAATTATATAAGGATTTTTTTAGAAATTAGTATGAAAATTTGCGTGAAAATAAATTTTGTAAGAATTTTCATACTATTTTTAGGAAAATCTTCATGTTATTTACAGTTTTCTAAGTTGGATAGCTGGCTCAAATCCACGACTCTAGCGTGAAACTATGCACTTTCGATTTCAGGTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAGGTACACAAATCATTAATAAAAAAACCCTTTAACTTGATGTGACTTGGCTTTAGATGTGTACAAGTATATATTGAACAAAACAAATTGTCCTACATGCCTACATAAAAATTGTGTGTGTTATGTAGCGACATCCACATGTTCAATTTTATTTGTTATATTTTTACGTCTTTTAAAAAATAAAATTGGATGTAGATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTG-AATGAATAATTCCCCTCTTCTATGTTTATGTAATCAAATAC</genome_strand>
        <mrna_strand>GATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG................................................................................................................................................................................................ATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAANAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAAGTTCATTTCGTTTTGCGTTTAATTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGAATATGTATATGTTTCGAGGGTTGGGGAAATGAATAATCCCCCTCCTCTATGTTTATGAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E719906" ref_strand="+" ref_description="SGN-E719906 [FC09AH04]">
      <seq>aaataagtaaacagatcaacacaacaaaattctgattttttctttgaaattttagagaaaaaaaaagatggaaggcataaatatatcgactcatccagatgttccaggtgaacctacgcagacaggaacatcaattcttgagactgcaacagctactattcaaggatttggtcctatcaacaaaattcatcaacatctttgcgcgttccatttctacggacacgacatgacacggcaagtggaggcgcaccacttctgtggacaccaaaatgaaaagttcaggcagtgtctcatttacgacaggcctgatgccgatgctcgtctaatcgggctcgagtacatcgtatcggaggagctgttcttgacattgccagacgacgagaagaaattctggcattcccacttgtacgaggtgaaaagtggtgtcttgttcatgcccggtgttccaggcccgattcaacgacaagatcatgaaaaaacggtgaaaacttatggcaaagtgatacatttctggcaggttgatagaggtgatacacttcctttgggaattcctcaagttatgatggcgcttactagagatggtcaactcgatcagaaccttgttcaagatgtggagaagcgttttggtgtgtcctttgatgaagaaagggagaaaagggcatatatggaaggtccgtcccatggggttcacccacttgctaatgctggaggcaaaggcattcgcactgtccttagagaagttgattgtaaacctatcgaatctgtccctagagtttttgtttaagcttaggttcatttcgttttgcgtttattttgttcaaaataaaattttacttttgtgacaggacttgtatatgtatatgtttcgagtgttggtgaatgaatattcccctcttctatgtttatgtaatccnnaaaaaaaaaaaaccaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="5635" stop="3522"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5335" g_stop="5132" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5131" i_stop="4723" i_length="409">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.778" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4722" g_stop="4319" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="608" r_length="404" r_score="0.998"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4126" g_stop="3820" g_length="307"/>
          <reference_exon_boundary r_type="cDNA" r_start="609" r_stop="914" r_length="306" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="916" polyA_stop="928"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E719906" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>915</cumulative_length_of_scored_exons>
        <coverage percentage="0.957" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E719906" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5335" e_stop="5132"/>
          <exon e_start="4722" e_stop="4319"/>
          <exon e_start="4126" e_stop="3820"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATAAGTAAACAGATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGCGTTAAGTTTCTATTATTCTATCCTTCGTTTTTTTATTATAACTAAATTTATAGCACTGATAACGCTAGTGGCGAATTTAAAATTTTTAATATATTAGGGTTATAGGTGGATATATTTATTTTGAGACGAGAGTAGATTGATATGTGTTATAAGTTACTCGTGAACAAAGCTGGACAATAGGAGTTTGGGGTAAAAAATAAGAACATTTAACTTCTGCACCATCAGAAGAAAAGTGAGAATTATATAAGGATTTTTTTAGAAATTAGTATGAAAATTTGCGTGAAAATAAATTTTGTAAGAATTTTCATACTATTTTTAGGAAAATCTTCATGTTATTTACAGTTTTCTAAGTTGGATAGCTGGCTCAAATCCACGACTCTAGCGTGAAACTATGCACTTTCGATTTCAGGTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAGGTACACAAATCATTAATAAAAAAACCCTTTAACTTGATGTGACTTGGCTTTAGATGTGTACAAGTATATATTGAACAAAACAAATTGTCCTACATGCCTACATAAAAATTGTGTGTGTTATGTAGCGACATCCACATGTTCAATTTTATTTGTTATATTTTTACGTCTTTTAAAAAATAAAATTGGATGTAGATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAATAATTCCCCTCTTCTATGTTTATGTAATCAA</genome_strand>
        <mrna_strand>AAATAAGTAAACAGATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAAAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG................................................................................................................................................................................................ATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAAT-ATTCCCCTCTTCTATGTTTATGTAATCCN</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E715269" ref_strand="+" ref_description="SGN-E715269 [FB13DC03]">
      <seq>atgacacggcaagtggaggcgcaccacttctgtggacaccaaaatgaagagttcaggcagtgtctcatttacgacaggcctgatgccgatgctcgtctaatcgggctcgagtacatcgtatcggaggagctgttcttgacattgccagacgacgagaagaaattctggcattcccacttgtacgaggtgaaaagtggtgtcttgttcatgcccggtgttccaggcccgattcaacgacaagatcatgaaaaaacggtgaaaacttatggcaaagtgatacatttctggcaggttgatagaggtgatacacttcctttgggaattcctcaagttatgatggcgcttactagagatggtcaactcgatcagaaccttgttcaagatgtggagaagcgttttggtgtgtcctttgatgaagaaagggagaaaagggcatatatggaaggtccgtcccatggggttcacccacttgctaatgctggaggcaaaggcattcgcactgtccttagagaagttgattgtaaacctatcgaatctgtccctagagtttttgtttaagcttaggttcatttcgttttgcgtttattttgttcaaaataaaattttacttttgtgacaggacttgtatatgtatatgtttcgagtgttggtgaatgaataattcccctcttctatgtttatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="5000" stop="3527"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4700" g_stop="4319" g_length="382"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="382" r_length="382" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4126" g_stop="3827" g_length="300"/>
          <reference_exon_boundary r_type="cDNA" r_start="383" r_stop="682" r_length="300" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E715269" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>682</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E715269" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4700" e_stop="4319"/>
          <exon e_start="4126" e_stop="3827"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAGGTACACAAATCATTAATAAAAAAACCCTTTAACTTGATGTGACTTGGCTTTAGATGTGTACAAGTATATATTGAACAAAACAAATTGTCCTACATGCCTACATAAAAATTGTGTGTGTTATGTAGCGACATCCACATGTTCAATTTTATTTGTTATATTTTTACGTCTTTTAAAAAATAAAATTGGATGTAGATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAATAATTCCCCTCTTCTATGTTTATG</genome_strand>
        <mrna_strand>ATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG................................................................................................................................................................................................ATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAATAATTCCCCTCTTCTATGTTTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E712739" ref_strand="+" ref_description="SGN-E712739 [FB05CG07]">
      <seq>aaaagtggtgtcttgttcatgcccggtgttccaggcccgattcaacgacaagatcatgaaaaaacggtgaaaacttatggcaaagtgatacatttctggcaggttgatagaggtgatacacttcctttgggaattcctcaagttatgatggcgcttactagagatggtcaactcgatcagaaccttgttcaagatgtggagaagcgttttggtgtgtcctttgatgaagaaagggagaaaagggcatatatggaaggtccgtcccatggggttcacccacttgctaatgctggaggcaaaggcattcgcactgtccttagagaagttgattgtaaacctatcgaatctgtccctagagtttttgtttaagcttaggttcatttcgttttgcgtttattttgttcaaaataaaattttacttttgtgacaggacttgtatatgtatatgtttcgagtgttggtgaatgaataattcccctcttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="4811" stop="3535"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="4511" g_stop="4319" g_length="193"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="193" r_length="193" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4126" g_stop="3836" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="194" r_stop="484" r_length="291" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E712739" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>484</cumulative_length_of_scored_exons>
        <coverage percentage="0.982" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E712739" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="4511" e_stop="4319"/>
          <exon e_start="4126" e_stop="3836"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAGGTACACAAATCATTAATAAAAAAACCCTTTAACTTGATGTGACTTGGCTTTAGATGTGTACAAGTATATATTGAACAAAACAAATTGTCCTACATGCCTACATAAAAATTGTGTGTGTTATGTAGCGACATCCACATGTTCAATTTTATTTGTTATATTTTTACGTCTTTTAAAAAATAAAATTGGATGTAGATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAATAATTCCCCTCTTCT</genome_strand>
        <mrna_strand>AAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG................................................................................................................................................................................................ATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAATAATTCCCCTCTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E702103" ref_strand="+" ref_description="SGN-E702103 [FA17DC06]">
      <seq>gatcaacacaacaaaattctgattttttctttgaaattttagagaaaaaaaaaagatggaaggcataaatatatcgactcatccagatgttccaggtgaacctacgcagacaggaacatcaattcttgagactgcaacagctactattcaaggatttggtcctatcaacaaaattcatcaacatctttgcgcgttccatttctacggacacgacatgacacggcaagtggaggcgcaccacttctgtggacaccaaaatgaagagttcaggcagtgtctcatttacgacaggcctgatgccgatgctcgtctaatcgggctcgagtacatcgtatcggaggagctgttcttgacattgccagacgacgagaagaaattctggcattcccacttgtacgaggtgaaaagtggtgtcttgttcatgcccggtgttccaggcccgattcaacgacaagatcatgaaaaaacggtgaaaacttatggcaaagtgatacatttctggcaggttgatagaggtgatacacttcctttgggaattcctcaagttatgatggcgcttactagagatggtcaactcgatcagaaccttgttcaagatgtggagaagcgttttggtgtgtcctttgatgaagaaagggagaaaagggcatatatggaaggtccgtcccatggggttcacccacttgctaatgctggaggcaaaggcattcgcactgtccttagagaagttgattgtaaacctatcgaatctgtccctagagtttttgtttaagcttaggttcatttcgttttgcgtttattttgttcaaaataaaattttacttttgtgacaggac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="5622" stop="3587"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5322" g_stop="5132" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="192" r_length="192" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5131" i_stop="4723" i_length="409">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.778" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4722" g_stop="4319" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="193" r_stop="596" r_length="404" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4126" g_stop="3887" g_length="240"/>
          <reference_exon_boundary r_type="cDNA" r_start="597" r_stop="836" r_length="240" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E702103" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E702103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5322" e_stop="5132"/>
          <exon e_start="4722" e_stop="4319"/>
          <exon e_start="4126" e_stop="3887"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAG-AAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGCGTTAAGTTTCTATTATTCTATCCTTCGTTTTTTTATTATAACTAAATTTATAGCACTGATAACGCTAGTGGCGAATTTAAAATTTTTAATATATTAGGGTTATAGGTGGATATATTTATTTTGAGACGAGAGTAGATTGATATGTGTTATAAGTTACTCGTGAACAAAGCTGGACAATAGGAGTTTGGGGTAAAAAATAAGAACATTTAACTTCTGCACCATCAGAAGAAAAGTGAGAATTATATAAGGATTTTTTTAGAAATTAGTATGAAAATTTGCGTGAAAATAAATTTTGTAAGAATTTTCATACTATTTTTAGGAAAATCTTCATGTTATTTACAGTTTTCTAAGTTGGATAGCTGGCTCAAATCCACGACTCTAGCGTGAAACTATGCACTTTCGATTTCAGGTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAGGTACACAAATCATTAATAAAAAAACCCTTTAACTTGATGTGACTTGGCTTTAGATGTGTACAAGTATATATTGAACAAAACAAATTGTCCTACATGCCTACATAAAAATTGTGTGTGTTATGTAGCGACATCCACATGTTCAATTTTATTTGTTATATTTTTACGTCTTTTAAAAAATAAAATTGGATGTAGATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGAC</genome_strand>
        <mrna_strand>GATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG................................................................................................................................................................................................ATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E718586" ref_strand="+" ref_description="SGN-E718586 [FC05AD08]">
      <seq>gggcgattggcggccaatcggccgaattaaaataagtaaacagaccaacacaacaaaattctgattttttctttgaaattttagagaaaaaaaaagatggaaggcataaatatatcgactcatccagatgttccaggtgaacctacgcaaacaggaacatcaattcttgagactgcaacagctactattcaaggatttggtcctatcaacaaaattcatcaacatctttgcgcgttccatttctacggacacgacatgacacggcaagtggaggcgcaccacttctgtggacaccaaaatgaaaagttcaggcagtgtctcatttacaacaggcctgatgccgatgctcgtctaatcgggctcgagtacatcgtatcggaggagctgttcttgacattgccagacgacaagaagaaattctggcattcccacttgtacaaggtgaaaagtggtgtcttgttcatgcccggtgttccaggcccgattcaacgacaagatcatgaaaaaacggtgaaaacttatggcaaagtgatacatttctggcaggttgatagaggtgatacacttcctttgggaattcctcaagttatgatggcgcttactagagatggtcaactcgatcagaaccttgttcaagatgtggagaagcgttttggtgtgtcctttgatgaagaaagggagaaaagggcatatatggaaggtccgtcccatggggttcacccacttgctaatgctggaggcaaaggcattcgcactgtccttagagaagttgattgtaaacctatcgaatctgtccctagagtttttgtttaagcttaggttcatttcgttttgcgtttattttgttcaaaataaaaattttacttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="5636" stop="3598"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5336" g_stop="5132" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="233" r_length="205" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5131" i_stop="4723" i_length="409">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.778" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4722" g_stop="4319" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="637" r_length="404" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4126" g_stop="3898" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="638" r_stop="867" r_length="230" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E718586" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>838</cumulative_length_of_scored_exons>
        <coverage percentage="0.967" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E718586" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5336" e_stop="5132"/>
          <exon e_start="4722" e_stop="4319"/>
          <exon e_start="4126" e_stop="3898"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAATAAGTAAACAGATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGCGTTAAGTTTCTATTATTCTATCCTTCGTTTTTTTATTATAACTAAATTTATAGCACTGATAACGCTAGTGGCGAATTTAAAATTTTTAATATATTAGGGTTATAGGTGGATATATTTATTTTGAGACGAGAGTAGATTGATATGTGTTATAAGTTACTCGTGAACAAAGCTGGACAATAGGAGTTTGGGGTAAAAAATAAGAACATTTAACTTCTGCACCATCAGAAGAAAAGTGAGAATTATATAAGGATTTTTTTAGAAATTAGTATGAAAATTTGCGTGAAAATAAATTTTGTAAGAATTTTCATACTATTTTTAGGAAAATCTTCATGTTATTTACAGTTTTCTAAGTTGGATAGCTGGCTCAAATCCACGACTCTAGCGTGAAACTATGCACTTTCGATTTCAGGTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAGGTACACAAATCATTAATAAAAAAACCCTTTAACTTGATGTGACTTGGCTTTAGATGTGTACAAGTATATATTGAACAAAACAAATTGTCCTACATGCCTACATAAAAATTGTGTGTGTTATGTAGCGACATCCACATGTTCAATTTTATTTGTTATATTTTTACGTCTTTTAAAAAATAAAATTGGATGTAGATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAAT-AAAATTTTACTTT</genome_strand>
        <mrna_strand>AAAATAAGTAAACAGACCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAAACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAAAGTTCAGGCAGTGTCTCATTTACAACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACAAGAAGAAATTCTGGCATTCCCACTTGTACAAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG................................................................................................................................................................................................ATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAAATTTTACTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E698680" ref_strand="+" ref_description="SGN-E698680 [FA07BA04]">
      <seq>ccctacacaacaaaattctgattttttctttgaaattttagagaaaaaaaaagatggaaggcataaatatatcgactcatccagatgttccaggtgaacctacgcagacaggaacatcaattcttgagactgcaacagctactattcaaggatttggtcctatcaacaaaattcatcaacatctttgcgcgttccatttctacggacacgacatgacacggcaagtggaggcgcaccacttctgtggacaccaaaatgaagagttcaggcagtgtctcatttacgacaggcctgatgcccgatgctcgtctaatcgggctcgagtacatcgtatcggaggagctgttcttgacattgccagacgacgagaagaaattctggcattcccacttgtacgaggtgaaaagtggtgtcttgttcatgcccggtgttccaggcccgattcaacgacaagatcatgaaaaaacggtgaaaacttatggcaaagtgatacatttctggcaggttgatagaggtgatacacttcctttgggaattcctcaagttatgatggcgcttactagagatggtcaactcgatcagaaccttgttcaagatgtggagaagcgttttggtgtgtccctttgatgaagaaagggagaaaagggcatatatggaaggtccgtcccatggggttcccccacttgctaatgctggaggcaaaggcatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="5619" stop="3714"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="5321" g_stop="5132" g_length="190"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="190" r_length="190" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="5131" i_stop="4723" i_length="409">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.778" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="4722" g_stop="4319" g_length="404"/>
          <reference_exon_boundary r_type="cDNA" r_start="191" r_stop="595" r_length="405" r_score="0.995"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="4126" g_stop="4014" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="596" r_stop="709" r_length="114" r_score="0.973"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E698680" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>707</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E698680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="5321" e_stop="5132"/>
          <exon e_start="4722" e_stop="4319"/>
          <exon e_start="4126" e_stop="4014"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGCGTTAAGTTTCTATTATTCTATCCTTCGTTTTTTTATTATAACTAAATTTATAGCACTGATAACGCTAGTGGCGAATTTAAAATTTTTAATATATTAGGGTTATAGGTGGATATATTTATTTTGAGACGAGAGTAGATTGATATGTGTTATAAGTTACTCGTGAACAAAGCTGGACAATAGGAGTTTGGGGTAAAAAATAAGAACATTTAACTTCTGCACCATCAGAAGAAAAGTGAGAATTATATAAGGATTTTTTTAGAAATTAGTATGAAAATTTGCGTGAAAATAAATTTTGTAAGAATTTTCATACTATTTTTAGGAAAATCTTCATGTTATTTACAGTTTTCTAAGTTGGATAGCTGGCTCAAATCCACGACTCTAGCGTGAAACTATGCACTTTCGATTTCAGGTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATG-CCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAGGTACACAAATCATTAATAAAAAAACCCTTTAACTTGATGTGACTTGGCTTTAGATGTGTACAAGTATATATTGAACAAAACAAATTGTCCTACATGCCTACATAAAAATTGTGTGTGTTATGTAGCGACATCCACATGTTCAATTTTATTTGTTATATTTTTACGTCTTTTAAAAAATAAAATTGGATGTAGATGTGGAGAAGCGTTTTGGTGTGT-CCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATT</genome_strand>
        <mrna_strand>CCCTACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGC.........................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG................................................................................................................................................................................................ATGTGGAGAAGCGTTTTGGTGTGTCCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCCCCCACTTGCTAATGCTGGAGGCAAAGGCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E439358" ref_strand="+" ref_description="SGN-E439358 [cSTA-11-H20]">
      <seq>aaacaagtgtagcactttttcatttttttaattcccaacttgctcttccctcttaccccctcaccccacccacccacctctttctctattaagttctcaacctccaaatcttaacaatccaatttaaaacaattctcaaatgtatccatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccaccgctggcggcggcggcggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccatcgttaacggtaatcacgagttcgcttctcatggatctcatcactcaaaccttggtccttcacggattttcccgtccaatttagcatctaattcgttaaattctgaatctacaagcaaagcgaaggaacaatcgaatttaca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17335" stop="18343"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17635" g_stop="18043" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="414" r_length="414" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E439358" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>409</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E439358" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17635" e_stop="18043"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACAAGTGTAGCACTTTTTCATTTTTTTAATTCCCAACTTG--C-T--CTCTT-CC--CTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACA</genome_strand>
        <mrna_strand>AAACAAGTGTAGCACTTTTTCATTTTTTTAATTCCCAACTTGCTCTTCCCTCTTACCCCCTCACCCCACCCACCCACCTCTTTCTCTATTAAGTTCTCAACCTCCAAATCTTAACAATCCAATTTAAAACAATTCTCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGC-G-G-CGGCGGCGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCATCGTTAACGGTAATCACGAGTTCGCTTCTCATGGATCTCATCACTCAAACCTTGGTCCTTCACGGATTTTCCCGTCCAATTTAGCATCTAATTCGTTAAATTCTGAATCTACAAGCAAAGCGAAGGAACAATCGAATTTACA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E420523" ref_strand="+" ref_description="SGN-E420523 [STM-31-I12]">
      <seq>cctcttaccccatcaccccacccacccacttctctctctattaagttctcaacctccaaatcttaacaatccaattcaaaacaattctcaaatgtatccatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccacagctggcggcggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccgtcgttaacgcgaaggaacaatcgaatttacagaggtcaattggtttcaacgacttaacaatcggcggcggcggcggcggaggaggaggtttgtcgacgacttcaacgacgccgttggttcgacatagtagctcaccggcgaggtttcttaatcaacttgctactgctgcaggtgatactggattttcagtttcaatggggagaggaagctataactcaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcactaggcaagaagctctctctcaaatagcagaggaaaatgaagatattgaagggaccagtatagccaatggccacagaaagtcaacacattcttatgccagtgcaagtagtttcgcaatgggttcttgggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17384" stop="23681"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17676" g_stop="17910" g_length="235"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="233" r_length="233" r_score="0.928"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17911" i_stop="18021" i_length="111">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18022" g_stop="18195" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="234" r_stop="404" r_length="171" r_score="0.948"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18196" i_stop="23154" i_length="4959">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.780" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23155" g_stop="23381" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="405" r_stop="631" r_length="227" r_score="0.974"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E420523" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420523" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17676" e_stop="17910"/>
          <exon e_start="18022" e_stop="18195"/>
          <exon e_start="23155" e_stop="23381"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCTCTCTTCCC-TCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAA</genome_strand>
        <mrna_strand>CCTCTTACCCCATCACCCCACCCACCCACTTCTCTCTCTATTAAGTTCTCAACCTCCAAATCTTAACAATCCAATTCAAAACAATTCTCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACAGCTGGC-G-G-CGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCGTCGTTAACG...............................................................................................................CGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAACGACTTAACAATCGGCGGC-G--GCGGCGGCGGAGGAGGAGGTTTGTCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTTCTTAATCAACTTGCTACTGCTGCAGGTGATACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACTCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACTAGGCAAGAAGCTCTCTCTCAAATAGCAGAGGAAAATGAAGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCAATGGGTTCTTGGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E452961" ref_strand="+" ref_description="SGN-E452961 [cSTS-18-O20]">
      <seq>cttaccccatcaccccacccacccacttctctctctattaagttctcaacctccaaatcttaacaatccaattcaaaacaattctcaaatgtatccatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccacagctggcggcggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccgtcgttaacggtaatcacgagttcgcttctcatggatctcatcactcaaaccttggtccttcacgatttttcccgtccaatttagcatctaattcgttaaattctgaatctacaagcaaagcgaaggaacaatcgaatttacagaggtcaattggtttcaacgacttaacaatcggcggcggcggcggcggaggaggaggtttgtcgacgacttcaacgacgccgttggttcgacatagtagctcaccggcgaggtttcttaatcaacttgctactgctgcaggtgatactgtttcaatggggagaggaagctataactcaaaaggcggtggagatagtggccggngaataacaaggctgaactctcagctcagcttcactaggcaagaagctctctctcaaatagcagaggaaaatgaggatattgaagggaccagtatagccaatggccacagaaagtcaacacattcttatgccagtgcaagtagttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17384" stop="23662"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17677" g_stop="18195" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23164" g_stop="23362" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="513" r_stop="711" r_length="199" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E452961" ref_strand="+">
        <total_alignment_score>0.946</total_alignment_score>
        <cumulative_length_of_scored_exons>718</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E452961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17677" e_stop="18195"/>
          <exon e_start="23164" e_stop="23362"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTT</genome_strand>
        <mrna_strand>CT-TACCCCATCACCCCACCCACCCACTTCTCTCTCTATTAAGTTCTCAACCTCCAAATCTTAACAATCCAATTCAAAACAATTCTCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACAGCTGGC-G-G-CGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCATGGATCTCATCACTCAAACCTTGGTCCTTCACGATTTTTCCCGTCCAATTTAGCATCTAATTCGTTAAATTCTGAATCTACAAGCAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAACGACTTAACAATCGGCGGC-G--GCGGCGGCGGAGGAGGAGGTTTGTCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTTCTTAATCAACTTGCTACTGCTGCAGGTGATACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATGGGGAGAGGAAGCTATAACTCAAAAGGCGGTGGAGATAGTGGCCGGNGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACTAGGCAAGAAGCTCTCTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E424645" ref_strand="+" ref_description="SGN-E424645 [STM-43-L8]">
      <seq>cttaccccatcaccccacccacccacttctctctctattaagttctcaacctccaaatcttaacaatccaattcaaaacaattctcaaatgtatccatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccacagctggcggcggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccgtcgttaacggtaatcacgagttcgcttctcatggatctcatcactcaaaccttggtccttcacgatttttcccgtccaatttagcatctaattcgttaaattctgaatctacaagcaaagcgaaggaacaatcgaatttacagaggtcaattggtttcaacgacttaacaatcggcggcggcggcggcggaagaagaagtttgtcaacgacttcaacgacgccgttggttcgacatagtagctcaccggcgaagtttcttaatcaacttgctactgctgcangtgatactgtttcaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17384" stop="18497"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17677" g_stop="18195" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="512" r_length="512" r_score="0.925"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E424645" ref_strand="+">
        <total_alignment_score>0.925</total_alignment_score>
        <cumulative_length_of_scored_exons>519</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E424645" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17677" e_stop="18195"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG</genome_strand>
        <mrna_strand>CT-TACCCCATCACCCCACCCACCCACTTCTCTCTCTATTAAGTTCTCAACCTCCAAATCTTAACAATCCAATTCAAAACAATTCTCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACAGCTGGC-G-G-CGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCATGGATCTCATCACTCAAACCTTGGTCCTTCACGATTTTTCCCGTCCAATTTAGCATCTAATTCGTTAAATTCTGAATCTACAAGCAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAACGACTTAACAATCGGCGGCGGCGGCGGCG--GAAGAAGAAG-TTTGTCAACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAAGTTTCTTAATCAACTTGCTACTGCTGCANGTGATACTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474961" ref_strand="+" ref_description="SGN-E474961 [cSTB-38-F15]">
      <seq>ttaccccatcaccccacccacccacttctctctctattaagttctcaacctccaaatcttaacaatccaattcaaaacaattctcaaatgtatccatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccacagctggcggcggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccgtcgttaacggtaatcacgagttcgcttctcatggatctcatcactcaaaccttggtccttcacgatttttcccgtccaatttagcatctaattcgttaaattctgaatctacaagcaaagcgaaggaacaatcgaatttacagaggtcaattggtttcaacgacttaacaatcggcggcggcggcggcggaggaggaggtttgtcgacgacttcaacgacgccgttggttcgacatagtagctcaccggcgaggtttcttaatcaacttgctactgctgcaggtgatactgtttcaatggggagaggaagctataactcaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17384" stop="23551"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17679" g_stop="18195" g_length="517"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="0.934"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23164" g_stop="23251" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="512" r_stop="599" r_length="88" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E474961" ref_strand="+">
        <total_alignment_score>0.942</total_alignment_score>
        <cumulative_length_of_scored_exons>605</cumulative_length_of_scored_exons>
        <coverage percentage="1.010" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E474961" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17679" e_stop="18195"/>
          <exon e_start="23164" e_stop="23251"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCAC</genome_strand>
        <mrna_strand>TTACCCCATCACCCCACCCACCCACTTCTCTCTCTATTAAGTTCTCAACCTCCAAATCTTAACAATCCAATTCAAAACAATTCTCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACAGCTGGC-G-G-CGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCATGGATCTCATCACTCAAACCTTGGTCCTTCACGATTTTTCCCGTCCAATTTAGCATCTAATTCGTTAAATTCTGAATCTACAAGCAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAACGACTTAACAATCGGCGGC-G--GCGGCGGCGGAGGAGGAGGTTTGTCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTTCTTAATCAACTTGCTACTGCTGCAGGTGATACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATGGGGAGAGGAAGCTATAACTCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E416757" ref_strand="+" ref_description="SGN-E416757 [STM-23-H9]">
      <seq>tgaacaagtgtagcactttttcatttttttaattcccaacttgctcttccctcttaccccctcaccccacccacccacctctctctctattaagttctcaacctccaaatcttaacaatccaattcaaaacaattctcaaatgtatccatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccaccgctggcggcggcggcggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccatcgttaacggtaatcacgagttcgcttctcatggatctcatcactcaaaccttggtccttcacggtttttcccgtccaatttagcatctaattcgttaaattctgaatctacaagcaaagcgaaggaacaatcgaatttacagaggtcaattggtttcaacgacttaacaatcggcggcggcggcggaggtttgccgacgacttcaccacgccgttggttcgacatagtagctcaccggcgaggtttcttaatcaacttgctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17336" stop="18479"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17684" g_stop="18179" g_length="496"/>
          <reference_exon_boundary r_type="cDNA" r_start="59" r_stop="538" r_length="480" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E416757" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>496</cumulative_length_of_scored_exons>
        <coverage percentage="0.922" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416757" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17684" e_stop="18179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACT</genome_strand>
        <mrna_strand>CCCTCACCCCACCCACCCACCTCTCTCTCTATTAAGTTCTCAACCTCCAAATCTTAACAATCCAATTCAAAACAATTCTCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGC-G-G-CGGCGGCGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCATCGTTAACGGTAATCACGAGTTCGCTTCTCATGGATCTCATCACTCAAACCTTGGTCCTTCACGGTTTTTCCCGTCCAATTTAGCATCTAATTCGTTAAATTCTGAATCTACAAGCAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAACGACTTAACAATCGGCGGC-G--GC-G-GC----GGA-G-G-TTTGCCGACGACTTC-ACCACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTTCTTAATCAACTTGCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E312877" ref_strand="+" ref_description="SGN-E312877 [cTOA-8-F21]">
      <seq>cctcaccccacccacccacctctctctctattaacttctcaacctccaaatcttaacaatccaattcgaacaaattatcaaatgtatccatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccaccgctggcggcgccggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaagccgtcgttaacggtaatcacgagttcgcttctcacggatctcatcactcacaccttggtccttcacggttttttcagtccaatctagcatctacttcgttaaattccgaatctacaagtaaagcgaaggaacaatcgaatttacagaggtcaattggtttcaatgacttaacaatcggcggcggaagcggcgct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17385" stop="18392"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17685" g_stop="18092" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E312877" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>408</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E312877" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17685" e_stop="18092"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCT</genome_strand>
        <mrna_strand>CCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E406375" ref_strand="+" ref_description="SGN-E406375 [PPI-3-J7]">
      <seq>taagttctcaacctccaactcttaaacaatcccattcaaaacaattctcaaatgtatccatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccaccagctggcggcggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccgtcgttaacgcgaaggaacaatcgaatttaccagaggtcaattggtttcaacgacttaacaatcggcggcggcggcggcggaggaggaggtttgtcgacgacttcaacgacgccgttggttcgacatagtagctcaccggcgaggtttcttaatcaacttgctactgctgcaggtgatactggattttcagtttcaatggggagaggaagctataactcaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcactaggcaagaagctctctctcaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17453" stop="23574"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17716" g_stop="17910" g_length="195"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="194" r_length="194" r_score="0.923"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="17911" i_stop="18021" i_length="111">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="18022" g_stop="18195" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="366" r_length="172" r_score="0.937"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="18196" i_stop="23154" i_length="4959">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.780" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23155" g_stop="23274" g_length="120"/>
          <reference_exon_boundary r_type="cDNA" r_start="367" r_stop="486" r_length="120" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E406375" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>489</cumulative_length_of_scored_exons>
        <coverage percentage="1.006" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E406375" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17716" e_stop="17910"/>
          <exon e_start="18022" e_stop="18195"/>
          <exon e_start="23155" e_stop="23274"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAACTTCTCAACCTCCAAATCTT-AACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACC-GCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTA-CAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAA</genome_strand>
        <mrna_strand>TAAGTTCTCAACCTCCAACTCTTAAACAATCCCATTCAAAACAATTCTCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCAGCTGGC-G-G-CGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCGTCGTTAACG...............................................................................................................CGAAGGAACAATCGAATTTACCAGAGGTCAATTGGTTTCAACGACTTAACAATCGGCGGC-G--GCGGCGGCGGAGGAGGAGGTTTGTCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTTCTTAATCAACTTGCTACTGCTGCAGGTGATACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACTCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACTAGGCAAGAAGCTCTCTCTCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E573031" ref_strand="+" ref_description="SGN-E573031 [32277]">
      <seq>ctcaaatgtatcatcatcaacatcttcttcatcacaaggttcaatgagccacaccagcaccacagctggcggcggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccgtcgttaacggtaatcacgagttcgcttctcatggatctcatcactcaaaccttggtccttcacgatttttcccgtccaatttagcatctaattcgttaaattctgaatctacaagcaaagcgaaggaacaatcgaatttacagaggtcaattggtttcaacgacttaacaatcggcggcggcggcggcggaggaggaggtttgtcgacgacttcaacgacgccgttggttcgacatagtagctcaccggcgaggtttcttaatcaacttgctactgctgcaggtgatactggattttcagtttcaatggggagaggaagctataactcaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcactaggcaagaagctctctctcaaatagccgaggaaactgaggatattgaagggaccagtatagccaatggccacagaaagtcaacaccattcttatggccagttgcaagtagtttcgcaaatgggtttcttggcggagagataacaactctataatgttctctgtcaccaccttaagcaaacgagccaagcgatgattagcaatgacctggtca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17462" stop="23751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17761" g_stop="18195" g_length="435"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="428" r_length="428" r_score="0.943"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18196" i_stop="23154" i_length="4959">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.780" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23155" g_stop="23451" g_length="297"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="738" r_length="310" r_score="0.879"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E573031" ref_strand="+">
        <total_alignment_score>0.917</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E573031" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17761" e_stop="18195"/>
          <exon e_start="23155" e_stop="23451"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACA-CATTCTTAT-GCCAG-TGCAAGTAGTTTCGC-GATGGG-TTCTTGG--GA-AGATAACAACTCTATAATGTTCTCTGTCA-CACC-T-AGCAAACGATCCAAGC-A-GATTAGCAATGACATTGTCA</genome_strand>
        <mrna_strand>CTCAAATGTAT-CATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACAGCTGGC-G-G-CGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCATGGATCTCATCACTCAAACCTTGGTCCTTCACGATTTTTCCCGTCCAATTTAGCATCTAATTCGTTAAATTCTGAATCTACAAGCAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAACGACTTAACAATCGGCGGC-G--GCGGCGGCGGAGGAGGAGGTTTGTCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTTCTTAATCAACTTGCTACTGCTGCAGGTGATACTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACTCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACTAGGCAAGAAGCTCTCTCTCAAATAGCCGAGGAAACTGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACCATTCTTATGGCCAGTTGCAAGTAGTTTCGCAAATGGGTTTCTTGGCGGAGAGATAACAACTCTATAATGTTCTCTGTCACCACCTTAAGCAAACGAGCCAAGCGATGATTAGCAATGACCTGGTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302506" ref_strand="+" ref_description="SGN-E302506 [cLEX-1-A23]">
      <seq>aacatcttcttcatcacaaggttcaatgagccacaccagcaccaccgctggcggcgccggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaagccgtcgttaacggtaatcacgagttcgcttctcacggatctcatcactcacaccttggtccttcacggttttttcagtccaatctagcatctacttcgttaaattccgaatctacaagtaaagcgaaggaacaatcgaatttacagaggtcaattggtttcaatgacttaacaatcggcggcggaagcggcgctggaggaggagttttgccgacgacttcaacgacgccgttggttcgacatagtagctcaccggcgaggttccttaatcaacttgctactgctgcaggtgatactgtttcaatggggagaggaagctataacccaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcacaacgcaagaagctctttctcaaatagcagaggaaaatgaggatattga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17480" stop="23599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17780" g_stop="18195" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="416" r_length="416" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23164" g_stop="23299" g_length="136"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="552" r_length="136" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E302506" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>552</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302506" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17780" e_stop="18195"/>
          <exon e_start="23164" e_stop="23299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGA</genome_strand>
        <mrna_strand>AACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E574282" ref_strand="+" ref_description="SGN-E574282 [33724]">
      <seq>cttcatcacaaggttcaatgagccacaccagcaccacagctggcggcggcggtggtctcactcgctacggttcagctccgggatcatttttaactacagcagttgaatccgtcgttaacggtaatcacgagttcgcttctcatggatctcatcactcaaaccttggtccttcacgatttttcccgtccaatttagcatctaattcgttaaattctgaatctacaagcaaagcgaaggaacaatcgaatttacagaggtcaattggtttcaacgacttaacaatcggcggcggcggcggcggaggaggaggtttgtcgacgacttcaacgacgccgttggttcgacatagtagctcaccggcgaggtttcttaatcaacttgctactgctgcaggtgatactgtttcaatggggagaggaagctataactcaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcactaggcaagaagctctctctcaaatagcagaggaaaatgaggatattgaagggaccagtatagccaatggccacagaaagtcaacacattcttatgccagtgcaagtagtttcgcaatgggttcttgggaagataacaactctataatgttctctgtcacacctagcaaacgagccaagcagattagcaatgacatggtcaatgggctcgatgatggggaaactcaagtttcagtttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17488" stop="23779"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17788" g_stop="18195" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="402" r_length="402" r_score="0.944"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.968" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23164" g_stop="23477" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="403" r_stop="716" r_length="314" r_score="0.971"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E574282" ref_strand="+">
        <total_alignment_score>0.956</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E574282" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17788" e_stop="18195"/>
          <exon e_start="23164" e_stop="23477"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG</genome_strand>
        <mrna_strand>CTTCATCACAAGGTTCAATGAGCCACACCAGCACCACAGCTGGC-G-G-CGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAATCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCATGGATCTCATCACTCAAACCTTGGTCCTTCACGATTTTTCCCGTCCAATTTAGCATCTAATTCGTTAAATTCTGAATCTACAAGCAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAACGACTTAACAATCGGCGGC-G--GCGGCGGCGGAGGAGGAGGTTTGTCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTTCTTAATCAACTTGCTACTGCTGCAGGTGATACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATGGGGAGAGGAAGCTATAACTCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACTAGGCAAGAAGCTCTCTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCAATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGAGCCAAGCAGATTAGCAATGACATGGTCAATGGGCTCGATGATGGGGAAACTCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E480214" ref_strand="+" ref_description="SGN-E480214 [cSTD-13-M19]">
      <seq>ccttggtccttcacggtttttcccgtccaatttagcatctaattcgttaaattctgaatctacaagcaaagcgaaggaaccatcgaatttacagaggtcaattggtttcaacgacttaaccaatcggcggcggcggcggaggtttgccgacgacttcaaccaccgcccgttggttcgacatagtagctcaccggcgaggtttcttaatcaacttgctactgctgcaggtgatacctgtttcaatggggaagaggaagctataactcaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcactaggcaagaagctctctctcaaatagcagaggaaaatgaggatattgaagggaccagtatagccaatggccacagaaagtcaacacattcttatgccagtgcaagtggtttcgcaatgggttcttgggaagataacaactctataatgttctctgtcacacctagcaaacgagccaagcagattagcaatgacatggtcaatgggctcgatgatggggaaactcagtttcagtttggcttgtctcagacagcactagaaatggcatctatggatagattgctgcacatccccgaggattctgttccttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17651" stop="24513"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="17951" g_stop="18195" g_length="245"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.878"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968">
            <donor d_prob="1.000" d_score="0.94"/>
            <acceptor a_prob="0.968" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23164" g_stop="23477" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="552" r_length="315" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.937" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24130" g_stop="24213" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="553" r_stop="636" r_length="84" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E480214" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>643</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E480214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="17951" e_stop="18195"/>
          <exon e_start="23164" e_stop="23477"/>
          <exon e_start="24130" e_stop="24213"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAA-CAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGA-CG-CCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATA-CTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGG-AGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAGGTAATATAACTGTAACTTTGTGAAAGTATGTTTCTCTGATAAAATTGTATTTTTAGTTGAGTGTTTAAGGGTCATGTTTTCTTTATCCTGAATTCTAGAGTTGTGCATGTGATATGCCTAACGTTAACAATATTTATGTGAAAAGTGAGATGTAATTTTAATGATGTTAGCCTTCTAGATGAAAAAATGTCATGTGCTTTGATTTGGTGATCTTACAACTGATTCAAAATCTGTTTTTTCTCCTTCAACACGCTATTTGAAATCTTTCAAAAAGTTGATGATTTGGTTTTTGCTTGCATTCTTTTGTCTCTAATTCCCTACCTTTCTTCTTTCTTCCAGCTAATATGAACTTGAAGGTCACTATCAGAAAACACATAAACCTTCACCGTTTGACATCTGTGTTTTCAACATGTAAACGGCGATAGATATACTTCCTTTACATTTTTCCCCTTAACAACCTTACAACTACATTCTGTGTATGTGTTTCTTTTCTTTCTGCAGAAGTATGTAAAATAAAATAGACAAAATAATCCATGTTGGCATACTCAATCATGTTTCTCGTGTGTAACTCACACAAAAATTGATGAAAACTGCATTTTTATTACTTGTGGGAGGATGAACTGATGTTTTTCGATTTTTGAACCATTTTCAGTTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGC</genome_strand>
        <mrna_strand>CCTTGGTCCTTCACGGTTTTTCCCGTCCAATTTAGCATCTAATTCGTTAAATTCTGAATCTACAAGCAAAGCGAAGGAACCATCGAATTTACAGAGGTCAATTGGTTTCAACGACTTAACCAATCGGCGGC-G--GC-G-GC----GGA-G-G-TTTGCCGACGACTTCAACCACCGCCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTTCTTAATCAACTTGCTACTGCTGCAGGTGATACCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATGGGGAAGAGGAAGCTATAACTCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACTAGGCAAGAAGCTCTCTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTGGTTTCGCAATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGAGCCAAGCAGATTAGCAATGACATGGTCAATGGGCTCGATGATGGGGAAACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTTTGGCTTGTCTCAGACAGCACTAGAAATGGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302507" ref_strand="+" ref_description="SGN-E302507 [cLEX-1-A23](-)">
      <seq>tggttcgacatagtagctcaccggcgaggttccttaatcaacttgctactgctgcaggtgatactgtttcaatggggagaggaagctataacccaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcacaacgcaagaagctctttctcaaatagcagaggaaaatgaggatattgaagggaccagtatagccaatggccacagaaagtcaacacattcttatgccagtgcaagtagtttcgcgatgggttcttgggaagataacaactctataatgttctctgtcacacctagcaaacgatccaagcagattagcaatgacattgtcaatgggctcgatgacggggaaactcagctaatatgaacttgaaggtcactatcagaaaacacataaaccttcaccgtttgacatctgtgttttcaacatgtaaacggcgatagatatacttcctttacatttttccccttaacaaccttacaactacattctgtgtatgtgtttcttttctttctgcagaagtatgtaaaataaaatagacaaaataatccatgttggcatactcaatcatgtttctcgtgtgtaactcacacaaaaattgatgaaaactgcatttttattacttgtgggaggatgaactgatgtttttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="17830" stop="24411"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="18130" g_stop="18195" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="66" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23164" g_stop="23477" g_length="314"/>
          <reference_exon_boundary r_type="cDNA" r_start="67" r_stop="380" r_length="314" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23478" i_stop="23816" i_length="339">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.968" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="23817" g_stop="24119" g_length="303"/>
          <reference_exon_boundary r_type="cDNA" r_start="381" r_stop="683" r_length="303" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E302507" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>683</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302507" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="18130" e_stop="18195"/>
          <exon e_start="23164" e_stop="23477"/>
          <exon e_start="23817" e_stop="24119"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTGGTAAGTTTTCAACTTCCCTTTTTTTCCTAATTGATATGTCAAATGACGAATTTAACCTTCCTGTATATGATTCCTTTCTGTTTGCTTTTTTTTTTTTCCTGCTAAAGTCATCAGCATTTGGTAACTTTTTTAACCAATCAGAGTAGACTTTGCTAATTGACTAATCACAACTAACTTTGCATAAATTAACAAACTTTGAAATGCATTTTACATTTTAAAGTATTCCCTGGTTACATTTTGTCCACATGACAAAGTTAATTTCGACACAAAATTTAAGAAAGAAATAATATTTTTATAGTTAAACATGTTAGAATAATTTTATAGCTATTTAAATCGTAAAAATAATTTCTTACAAAAATGTTAAATTGAATTACGAACAATAAGCTCTTGTGATCTGTTTTTTTTCCAAACCCCAGACACAGCAGAAGCTTAATTAATGCGTTGAGTTACCTTTTAAAGAAAGTGTAATTAGCTACCGATGAAATGAGAAAGTAGGTTTCTTGCAGATAGAACCAATTAATGGAGGATTAACTTATATTAATCATCTCATTGGACTTCATTAACTTCTAAATGAATTGTCATGAGATTACAGTACAAAAGTAAGATTTACTTATGTCACAATTAGACGTTATAAACTGACTAGTTGAGCACTTAAACATAAATAATTACTCAAAAAAGGACACATATAGAGTAAGTGGGGAAATATGCTAAGAGTAATTGAGTTTGTCTTATCTAATTACATATAACAAGTTGCTAAAAAAAATTTACCAAAAGATTAAAAGAGTTATGTACATGTTTAAGGATATACTTAGTACTCGAAGAATCTTTAATACCTCCTTACAACTTGCAAACTCATTTTTTCTTTCCCTCCATATGATTAGTACTTTTAACTTCTAATCTTAAAAAAGAAGTACTACTTCATTTGTCCCACTTCATGCAGTTACTAAAATGGTGAGCTAAAAGGAATTCTATAAAAATTTTGAACTATGAATTATTAAATTTATATTACATTTTAAGCAATTTTAAATATGTAATTTCTTTTTAAAAAGATATATGTCCATCAATTATTGAATCATCTCACATAAAATGGAACACAGAAAATATATCATATCAACAAAAGTTTAGCTAATTCTACTTTTCCTATGGTGAGTGTATTTTTGTGTCTGCTCTTTTTATCTGTCTAAGATAATAACAATAACATACTTAATATAATCTTATAACAGAAGTCTCGAAAGTACAGAATGTACATATATTTTATGTCTATTTTGTAGAAATCAAATCACTAAAAACAGTTTCATCTTTTATCTATCTACCTTCTACCATTTCCAAATTTATACTTTCCAATCTTGACAAGTATGTTAGATAGACTTCTGTAGTTCATGTTTGTAATTGAATACATCGTGTAATTCAAGGTTTATACTCCCTCTAGTCCCAATTATCAATCGTTTGACAAGTTGAAATTATTTATAAATATTAGTATCCATTTTAGAAATACAAGAAATGATTTGTTAATCCTTTCGTTTCAATTTATGTGTCATAATTTGATTTTGTACAAACTTTAGAAAAAAAAGTACATACGTCTACAAGTTTTGGTCTGTAACATCCCAAAACATATATGTAACTTTTATAAGATGTGTATACATTAAAAACTTCAGATTAAAAATGTGTCATTATTTTGAAGCATATAAAAAAAATTTGATACATTTAGCTAAAATTATATATTTATTTCGAGAAATTCATTTAACATAAATAAATTCTTGTTTTACAACCAACTTAATGATTTAGAATTCAAAAGTTATATACTCTAAATCTTAATTCCGCTTATTGTTAATTAATATAAAAAGTAGAGGGGAACAATCTTGGGTTAGCTTAAAATAAATGGAATTAGTTTCCTAAATTAGAAGGTATATAACGTAAGCAGCCGCAAATTATTATTTGCTCTCTTTTAAAAATAACTTATCCATCAATAGGGCAAATTAGGTGATTAGTGGAGCTAATTGGTAGGTCTAAATCCTGTCTCAACTCTTAGTGACATGTAAAGGTGGGTTCCACATTTGGTGAAGGTGAATGCATGTGTGTCTGCTAAGTTTCCAATCGCCCACAACATTTGGCCAATGAAACCACTGGTATTAATTAATTACTCATTAGATGGTGGATCCTTCTTTAAGATAGAATCTCATTAGCACTAATTAATATTTTTTTTAAAAAAAAAATGTTTCTGGAGATAGGATTTGGGGTGGGGGTTGAACGGAGTTAGATGCAACTTGTGCAATTTGACACTGCTGAGCTTATAAACAATAATATACCGTAATGGTGAGAAAATTTAAAGAAGTTATAAGTTAATATATTAAACAAATTTGTTACTTTTAGTTTTTTATAACTATTATATTTAAACCAACTTGCATGTATCTAATTAATTACGTATATGTAGTTAATTATATAAAAGTCAAATTTTATTTCTTTTTAGTCTAAGAGGTAAGGGATTTGATCTTAATGGTAAAAGTATAACGTGTGATATTCAAAATGGAGAAGATCAGAAAGATGAATTCATTATCCATTGAACTGTGAATCATGCATCACTGATCCTTGTTGTTTTTCGATTTTAATAAAAAAATATTTGACCTTTGTATTAATATAATTAATGGTGCCTAGATCCTTAGAAGCAGGGAAGGGAGAAAGAATGATACTACTTTTGTAAATTAATTTGATATGAGGTGGGGAGACTGAAAGGCTATGCTTTTATTGTCAACTATCAGAAACTCTACAACTCATTTTGATCATCTAAGTTGGTTAGACTTTTTTAATTTGTTATTACGATTCATTTAAAATGCACTATTTTAAAAGACCTGACATGCAATTTTCTATATTTTTGAAATGTCCGATCGGTATAGAAATAAATTCTCCTTTCAACTAAAAGGGTGGTTTAATCTATGATTTTTTGCCAATAAGATATATTGATTTGGAATAGGACATACAATGTGGATGCTTTGACCTCGAAAAAAGGCAATTTATTCTCTATTAATTTTTTAAAATAATTATAATCTACTCTACGTTAGGTTTAGGTCTACTATTAGACCTTTAATCGTTGTATTAGTTTCTTAAGTTAATGTGTGTATGAACTAAGTCATGATCATTATGTCACACAAACTTGAATGGGTCAATAAAGTTGTGTTGCGGTTCCTTTATTCATTTTTTCTACTTATGGTAATTGATATATGAGAGGTTGGAGTGTGCTTCTTTGAGCACTGAGTCTATTCCATTAGTTATGTTGTAGTTTTCTTTTCTTCAACCCAAATAAAACAATAAATAAATTAATTAATTAAACGAGCACAACTTGGGACTTATTATTCATTTTATTTCATTTTATATGGTATCATTTTTATTAAAAAATTTATTCCATGAATAATTACGATAACATATATGTATAATATCACAAATAGAATATAGGGAGGACAATATGTACTTCTTTACTAGGTGATGAAACTTTAGGCTAAGAAAAAATTATTTGAAGTAAGATTGTCAAAAAATATTTGAAACAGAATATTGTATAATTATGTAGTAATGTAATAGAAAGAATTGAAAAACTTTCAGGGGCCAAAAAGTATTTTGTGGTCTCTGTAAATTATACGAGTAGAGATATAAGTTTTGGAATTATTAATTGATTTTATAGAACAAGTTGTCACTTGGGCCCAATGAGCAATATAGATATTAGAGTATTATTTTGTTGTTTCCTTAATCATAATCTTAGTAAGAAGCTCCTTATTGGAGGAAGTGAGCATTTCTTTTGTGGGGTCCAAACTTTCAAATATAGCAAGTTGACATTATATAAAATATAAAATTCTAGTAAAAGTAGCAACTAGCCAATAAAATAATGAATAAAGGAAAGGGAAGGAGTTTTGTCCCTTTATTTAATTGATGGTGATTGTGCCTACGATTCTTTGAATCCATTTTTTACTTATTTTGAGGTCAAGATGCATTCACCAAACAGCTCCTAAAATTCCATGACTGGTCAGTTATCACGTGCATGGGTATTTACTTGACCCGTTTATTCCCACTTGCTCTATCCATTATTATTATTATTATTATCTTAGCCGCCACCTAAAACCAGCCCAATGTTTTTGAGTGCTTTACTAGTTCTAAGATATTTTCTGAAAGTTTTACAGTCGACTGTTAGCAGATGATCCTGTTTTTATTTGTTGGTGTAATTTATGATTCTTCATATAAGAAATGCTTTGATTATGATCTTAAATTTTGTAGACAATAAACAAACTTCAATGTTTTGTTAGTTTCAAAGGCTTATATTTTCACAACTTGTGAAAATAGTGATTAAATTTAAATGATGACTTATTTTAAAAAATTTTTAAATCAAGGACTTTCTCATTTACTATTCATATTTTGTTTTGTCTAGTGGTTAACGAAGGAGGTTTAAGCATTATAAGGTCCTAGGTTCAGTTCCTAACAAAGAGAAAACACTAGGTGATATTTTCCCTCATATATCCCATGAAATGGAGCTTTAGTAGATCAGTTAGTTTTGAGTTGAGGGTCTATCGAAAACAATCTCTCTACCCCACAAGGTAGGATAAGGTGTGTGTATCTTATTTTCGTTGGTTTTATCTTTAGTTTGAGTAGTAATATTCATACCTTGTCAAACAAAGACTTCAAATTAGATATCAAATGGAAGTCTAACAATTTGATGTGGAAAAGAGGATCTCTTTTATGTTATGTCTGTAATATACTTTAATTTTGTCAAAGAAGACCTTAATATATAGAGCCAAAAGAGACCAAATACTTTTCCATGGAGACTACAAGGGTCACACCAGAACTATCAGCTTTTGAGATGACATTTTTGAATCAAACTCACGAAAAGATTCATATCTAATATGTTGTAAAGGTTTTAATTTGGTAAAAAGAACTCGTTACCATAACTTGTAGTATAATTCAAGTTTGACTTGACGTTAGGATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAGGTAATATAACTGTAACTTTGTGAAAGTATGTTTCTCTGATAAAATTGTATTTTTAGTTGAGTGTTTAAGGGTCATGTTTTCTTTATCCTGAATTCTAGAGTTGTGCATGTGATATGCCTAACGTTAACAATATTTATGTGAAAAGTGAGATGTAATTTTAATGATGTTAGCCTTCTAGATGAAAAAATGTCATGTGCTTTGATTTGGTGATCTTACAACTGATTCAAAATCTGTTTTTTCTCCTTCAACACGCTATTTGAAATCTTTCAAAAAGTTGATGATTTGGTTTTTGCTTGCATTCTTTTGTCTCTAATTCCCTACCTTTCTTCTTTCTTCCAGCTAATATGAACTTGAAGGTCACTATCAGAAAACACATAAACCTTCACCGTTTGACATCTGTGTTTTCAACATGTAAACGGCGATAGATATACTTCCTTTACATTTTTCCCCTTAACAACCTTACAACTACATTCTGTGTATGTGTTTCTTTTCTTTCTGCAGAAGTATGTAAAATAAAATAGACAAAATAATCCATGTTGGCATACTCAATCATGTTTCTCGTGTGTAACTCACACAAAAATTGATGAAAACTGCATTTTTATTACTTGTGGGAGGATGAACTGATGTTTTTCGATTTTTGAA</genome_strand>
        <mrna_strand>TGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG...................................................................................................................................................................................................................................................................................................................................................CTAATATGAACTTGAAGGTCACTATCAGAAAACACATAAACCTTCACCGTTTGACATCTGTGTTTTCAACATGTAAACGGCGATAGATATACTTCCTTTACATTTTTCCCCTTAACAACCTTACAACTACATTCTGTGTATGTGTTTCTTTTCTTTCTGCAGAAGTATGTAAAATAAAATAGACAAAATAATCCATGTTGGCATACTCAATCATGTTTCTCGTGTGTAACTCACACAAAAATTGATGAAAACTGCATTTTTATTACTTGTGGGAGGATGAACTGATGTTTTTCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368037" ref_strand="+" ref_description="SGN-E368037 [TUS-22-N1]">
      <seq>gagaggaagctataacccaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcacaacgcaagaagctctttctcaaatagcagaggaaaatgaggatattgaagggaccagtatagccaatggccacagaaagtcaacacattcttatgccagtgcaagtagtttcgcgatgggttcttgggaagataacaactctataatgttctctgtcacacctagcaaacgatccaagcagattagcaatgacattgtcaatgggctcgatgacggggaaactcagtttcagtttggcttgtctcagacagctctagaaatagcatctatggatagattgctgcacatccccgaggattctgttccttgcaaaattcgtgccaagcgtggttgtgctactcatcctcgcagcattgcagaaagggagagaagaaccagaattagtgggaaactaaagaagttacaagatcttgttccaaacatggacaagcaaacgagctatgctgacatgctggatctagcagtgcagcatattcgaacccttcaagatcaggttcagaatctgaatacagaacttgaaaactgcaaatgtggatgtaggaaatcaagtcaataacaaaatgggaggaagcactttagctgaagattgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="22874" stop="25599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23174" g_stop="23477" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24130" g_stop="24267" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="442" r_length="138" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24613" g_stop="24678" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="443" r_stop="508" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24809" g_stop="24877" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="509" r_stop="577" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25208" g_stop="25299" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="578" r_stop="669" r_length="92" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E368037" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>669</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368037" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23174" e_stop="23477"/>
          <exon e_start="24130" e_stop="24267"/>
          <exon e_start="24613" e_stop="24678"/>
          <exon e_start="24809" e_stop="24877"/>
          <exon e_start="25208" e_stop="25299"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAGGTAATATAACTGTAACTTTGTGAAAGTATGTTTCTCTGATAAAATTGTATTTTTAGTTGAGTGTTTAAGGGTCATGTTTTCTTTATCCTGAATTCTAGAGTTGTGCATGTGATATGCCTAACGTTAACAATATTTATGTGAAAAGTGAGATGTAATTTTAATGATGTTAGCCTTCTAGATGAAAAAATGTCATGTGCTTTGATTTGGTGATCTTACAACTGATTCAAAATCTGTTTTTTCTCCTTCAACACGCTATTTGAAATCTTTCAAAAAGTTGATGATTTGGTTTTTGCTTGCATTCTTTTGTCTCTAATTCCCTACCTTTCTTCTTTCTTCCAGCTAATATGAACTTGAAGGTCACTATCAGAAAACACATAAACCTTCACCGTTTGACATCTGTGTTTTCAACATGTAAACGGCGATAGATATACTTCCTTTACATTTTTCCCCTTAACAACCTTACAACTACATTCTGTGTATGTGTTTCTTTTCTTTCTGCAGAAGTATGTAAAATAAAATAGACAAAATAATCCATGTTGGCATACTCAATCATGTTTCTCGTGTGTAACTCACACAAAAATTGATGAAAACTGCATTTTTATTACTTGTGGGAGGATGAACTGATGTTTTTCGATTTTTGAACCATTTTCAGTTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGGGTGATCTTCATATTTCTTAAGCCATTCCTTTACTTGGCCCTTATAATGAACAAAAAAATAAAAATCCAATTGAACTTTATCAATTTATTTTTCCCCTGCTTCATTTCATTTGATATGGCTTCGATTGAGAATGAATTTCAAGATACTATCTGAAGCTGATGAAACTCTTCCAGCCACTGATTTTAAATGCCAACTTTGCTATTATGTAACAATAGATTTAATTGTCAACATGTAGTAGTTGTGGCATTTGAAATACTTTTCCTCAAAATTTGGATCATCATAGCTATGTTTTGCTTTTACTAATACACAATAATGAACGTTGTATTCTTTTCTCATCTTATGCAGGAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAGGTATAGTTTGCTTCCACTCCACAATATTTTCTCAATTGGAGCTTATTGGAACATGTTTTAGCTGTAAATTTTGTCGCAGCAAACGAGCTACACTCCAATATTAACAACATTTTCTTGTTTGTTTTCGCAGCAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAGGTGAGTGATCAAAATGATCAACCTTACTGCTTTGCAGCTTTACCTAAATTACTTATACTCTATGTTCCTTACACTCTTCAAAGAAACAGCCAGTGTGTTGGATTAGATCCTCCAAAAGCTATTAGTACAACAATTTTGGCCCGAGCAACATATCTTGTATTCTCACATGAGTTTACACCAAACCGAACAATTTAACCTTAATGTATTTGGGATAGATGATGTCTAATATGTTTTGCAAATAAAAAATGATAAATTTTCTAGCCCCACCTTTATAGCTGTGTGATTGAAATAGTCGAAATATAATTTTCACGTTTTCTTATTCTTATGCAGAATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGAC</genome_strand>
        <mrna_strand>GAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG.........................................................................................................................................................................................................................................................................................................................................................GAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG..................................................................................................................................CAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAG..........................................................................................................................................................................................................................................................................................................................................AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241002" ref_strand="+" ref_description="SGN-E241002 [cLED-24-D22]">
      <seq>gagaggaagctataacccaaaaggcggtggagatagtggccggggaataacaaggctgaactctcagctcagcttcacaacgcaagaagctctttctcaaatagcagaggaaaatgaggatattgaagggaccagtatagccaatggccacagaaagtcaacacattcttatgccagtgcaagtagtttcgcgatgggttcttgggaagataacaactctataatgttctctgtcacacctagcaaacgatccaagcagattagcaatgacattgtcaatgggctcgatgacggggaaactcagtttcagtttggcttgtctcaaacagctctagaaatagcatctatggata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="22874" stop="24478"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23174" g_stop="23477" g_length="304"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="304" r_length="304" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24130" g_stop="24178" g_length="49"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="353" r_length="49" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E241002" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241002" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23174" e_stop="23477"/>
          <exon e_start="24130" e_stop="24178"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAGGTAATATAACTGTAACTTTGTGAAAGTATGTTTCTCTGATAAAATTGTATTTTTAGTTGAGTGTTTAAGGGTCATGTTTTCTTTATCCTGAATTCTAGAGTTGTGCATGTGATATGCCTAACGTTAACAATATTTATGTGAAAAGTGAGATGTAATTTTAATGATGTTAGCCTTCTAGATGAAAAAATGTCATGTGCTTTGATTTGGTGATCTTACAACTGATTCAAAATCTGTTTTTTCTCCTTCAACACGCTATTTGAAATCTTTCAAAAAGTTGATGATTTGGTTTTTGCTTGCATTCTTTTGTCTCTAATTCCCTACCTTTCTTCTTTCTTCCAGCTAATATGAACTTGAAGGTCACTATCAGAAAACACATAAACCTTCACCGTTTGACATCTGTGTTTTCAACATGTAAACGGCGATAGATATACTTCCTTTACATTTTTCCCCTTAACAACCTTACAACTACATTCTGTGTATGTGTTTCTTTTCTTTCTGCAGAAGTATGTAAAATAAAATAGACAAAATAATCCATGTTGGCATACTCAATCATGTTTCTCGTGTGTAACTCACACAAAAATTGATGAAAACTGCATTTTTATTACTTGTGGGAGGATGAACTGATGTTTTTCGATTTTTGAACCATTTTCAGTTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATA</genome_strand>
        <mrna_strand>GAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTTTGGCTTGTCTCAAACAGCTCTAGAAATAGCATCTATGGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E228508" ref_strand="+" ref_description="SGN-E228508 [cLED-3-B10]">
      <seq>agtggccggggaataacaaggctgaactctcagctcagcttcacaacgcaagaagctctttctcaaatagcagaggaaaatgaggatattgaagggaccagtatagccaatggccacagaaagtcaacacattcttatgccagtgcaagtagtttcgcgatgggttcttgggaagataacaactctataatgttctctgtcacacctagcaaacgatccaagcagattagcaatgacattgtcaatgggctcgatgacggggaaactcagtttcagtttggcttgtctcagacagctctagaaatagcatctatggatagattgctgcacatccccgaggattctgttcctttgcaaaattcgtgccaagcgtggttgtgctactcatcctcgcagcattgcagaaagggagagaagaaccagaattagtgggaaactaaagaagttacaagatcttgttccaaacatggacaagcaaacgagctatgctgacatgctggatctagca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="22908" stop="25141"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23208" g_stop="23477" g_length="270"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="270" r_length="270" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.937" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24130" g_stop="24267" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="271" r_stop="409" r_length="139" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24613" g_stop="24678" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="410" r_stop="475" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24809" g_stop="24841" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="476" r_stop="508" r_length="33" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E228508" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>507</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E228508" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23208" e_stop="23477"/>
          <exon e_start="24130" e_stop="24267"/>
          <exon e_start="24613" e_stop="24678"/>
          <exon e_start="24809" e_stop="24841"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAGGTAATATAACTGTAACTTTGTGAAAGTATGTTTCTCTGATAAAATTGTATTTTTAGTTGAGTGTTTAAGGGTCATGTTTTCTTTATCCTGAATTCTAGAGTTGTGCATGTGATATGCCTAACGTTAACAATATTTATGTGAAAAGTGAGATGTAATTTTAATGATGTTAGCCTTCTAGATGAAAAAATGTCATGTGCTTTGATTTGGTGATCTTACAACTGATTCAAAATCTGTTTTTTCTCCTTCAACACGCTATTTGAAATCTTTCAAAAAGTTGATGATTTGGTTTTTGCTTGCATTCTTTTGTCTCTAATTCCCTACCTTTCTTCTTTCTTCCAGCTAATATGAACTTGAAGGTCACTATCAGAAAACACATAAACCTTCACCGTTTGACATCTGTGTTTTCAACATGTAAACGGCGATAGATATACTTCCTTTACATTTTTCCCCTTAACAACCTTACAACTACATTCTGTGTATGTGTTTCTTTTCTTTCTGCAGAAGTATGTAAAATAAAATAGACAAAATAATCCATGTTGGCATACTCAATCATGTTTCTCGTGTGTAACTCACACAAAAATTGATGAAAACTGCATTTTTATTACTTGTGGGAGGATGAACTGATGTTTTTCGATTTTTGAACCATTTTCAGTTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCC-TTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGGGTGATCTTCATATTTCTTAAGCCATTCCTTTACTTGGCCCTTATAATGAACAAAAAAATAAAAATCCAATTGAACTTTATCAATTTATTTTTCCCCTGCTTCATTTCATTTGATATGGCTTCGATTGAGAATGAATTTCAAGATACTATCTGAAGCTGATGAAACTCTTCCAGCCACTGATTTTAAATGCCAACTTTGCTATTATGTAACAATAGATTTAATTGTCAACATGTAGTAGTTGTGGCATTTGAAATACTTTTCCTCAAAATTTGGATCATCATAGCTATGTTTTGCTTTTACTAATACACAATAATGAACGTTGTATTCTTTTCTCATCTTATGCAGGAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAGGTATAGTTTGCTTCCACTCCACAATATTTTCTCAATTGGAGCTTATTGGAACATGTTTTAGCTGTAAATTTTGTCGCAGCAAACGAGCTACACTCCAATATTAACAACATTTTCTTGTTTGTTTTCGCAGCAAACGAGCTATGCTGACATGCTGGATCTAGCA</genome_strand>
        <mrna_strand>AGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG.........................................................................................................................................................................................................................................................................................................................................................GAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG..................................................................................................................................CAAACGAGCTATGCTGACATGCTGGATCTAGCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368036" ref_strand="+" ref_description="SGN-E368036 [TUS-22-N1](-)">
      <seq>gtcaatgggctcgatgacggggaaactcagtttcagtttggctttgtctcagacagctctagaaatagcatctatggatagattgctgcacatccccgaggattctgttccttgcaaaattcgtgccaagcgtggttgtgctactcatcctcgcagcattgcagaaagggagagaagaaccagaattagtgggaaactaaagaagttacaagatcttgttccaaacatggacaagcaaacgagctatgctgacatgctggatctagcagtgcagcatattcgaacccttcaagatcaggttcagaatctgaatacagaacttgaaaactgcaaatgtggatgtaggaaatcaagtcaataacaaaatgggaggaagcactttagctgaagattgacttaaaaggatttttgtcaccattattttgcttcttagaaactcaaatttgtacatatggaagtaaatttcatactagttttttaaagctaaaaagtgaactctctttgtttttttttcttttcccttttccagttagaagactacgtatatgattgttttggattatttctagttttcttttttcatctaacatttacatttttaatttatttttgagtttattttgcttgaagatcataaaagctaattgatgatgttgtacaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="23148" stop="67794"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23448" g_stop="23477" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.937" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24130" g_stop="24267" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="169" r_length="139" r_score="0.986"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24613" g_stop="24678" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="170" r_stop="235" r_length="66" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="24809" g_stop="24877" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="236" r_stop="304" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="25208" g_stop="25563" g_length="356"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="660" r_length="356" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="25564" i_stop="26399" i_length="836">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="26400" g_stop="26419" g_length="20"/>
          <reference_exon_boundary r_type="cDNA" r_start="661" r_stop="680" r_length="20" r_score="0.650"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E368036" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>679</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368036" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23448" e_stop="23477"/>
          <exon e_start="24130" e_stop="24267"/>
          <exon e_start="24613" e_stop="24678"/>
          <exon e_start="24809" e_stop="24877"/>
          <exon e_start="25208" e_stop="25563"/>
          <exon e_start="26400" e_stop="26419"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTCAATGGGCTCGATGACGGGGAAACTCAGGTAATATAACTGTAACTTTGTGAAAGTATGTTTCTCTGATAAAATTGTATTTTTAGTTGAGTGTTTAAGGGTCATGTTTTCTTTATCCTGAATTCTAGAGTTGTGCATGTGATATGCCTAACGTTAACAATATTTATGTGAAAAGTGAGATGTAATTTTAATGATGTTAGCCTTCTAGATGAAAAAATGTCATGTGCTTTGATTTGGTGATCTTACAACTGATTCAAAATCTGTTTTTTCTCCTTCAACACGCTATTTGAAATCTTTCAAAAAGTTGATGATTTGGTTTTTGCTTGCATTCTTTTGTCTCTAATTCCCTACCTTTCTTCTTTCTTCCAGCTAATATGAACTTGAAGGTCACTATCAGAAAACACATAAACCTTCACCGTTTGACATCTGTGTTTTCAACATGTAAACGGCGATAGATATACTTCCTTTACATTTTTCCCCTTAACAACCTTACAACTACATTCTGTGTATGTGTTTCTTTTCTTTCTGCAGAAGTATGTAAAATAAAATAGACAAAATAATCCATGTTGGCATACTCAATCATGTTTCTCGTGTGTAACTCACACAAAAATTGATGAAAACTGCATTTTTATTACTTGTGGGAGGATGAACTGATGTTTTTCGATTTTTGAACCATTTTCAGTTTCAGTTTGGC-TTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGGGTGATCTTCATATTTCTTAAGCCATTCCTTTACTTGGCCCTTATAATGAACAAAAAAATAAAAATCCAATTGAACTTTATCAATTTATTTTTCCCCTGCTTCATTTCATTTGATATGGCTTCGATTGAGAATGAATTTCAAGATACTATCTGAAGCTGATGAAACTCTTCCAGCCACTGATTTTAAATGCCAACTTTGCTATTATGTAACAATAGATTTAATTGTCAACATGTAGTAGTTGTGGCATTTGAAATACTTTTCCTCAAAATTTGGATCATCATAGCTATGTTTTGCTTTTACTAATACACAATAATGAACGTTGTATTCTTTTCTCATCTTATGCAGGAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAGGTATAGTTTGCTTCCACTCCACAATATTTTCTCAATTGGAGCTTATTGGAACATGTTTTAGCTGTAAATTTTGTCGCAGCAAACGAGCTACACTCCAATATTAACAACATTTTCTTGTTTGTTTTCGCAGCAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAGGTGAGTGATCAAAATGATCAACCTTACTGCTTTGCAGCTTTACCTAAATTACTTATACTCTATGTTCCTTACACTCTTCAAAGAAACAGCCAGTGTGTTGGATTAGATCCTCCAAAAGCTATTAGTACAACAATTTTGGCCCGAGCAACATATCTTGTATTCTCACATGAGTTTACACCAAACCGAACAATTTAACCTTAATGTATTTGGGATAGATGATGTCTAATATGTTTTGCAAATAAAAAATGATAAATTTTCTAGCCCCACCTTTATAGCTGTGTGATTGAAATAGTCGAAATATAATTTTCACGTTTTCTTATTCTTATGCAGAATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACAACTACTTTCTCTATTTCATTTTTATGTTCTTCTTGGGAAACAACCATTTACAATTTGAAATCCAACTCTACTCTACAAGGATTTCATGTGTTTTATTTATCGAACTGTTCATTTTCTGTGAAACAAGTCATTTAATTAATATAACGTTTGTATTGAGCCATAAAATCTATTTTTCCCTTCTTACTTGTGTATATCATGAATAAATGTGATTTATCAATGCGGCACTTTAGGATATTTTAATATTTTGCTCATGAATGATGATTTGCTCATTCAGTAATATTGCATAAGAATTGAGTAACTTTTGATATCAATGTGATCTATATTTTGCATATACAATCAAAATTTCAACTTCATATCAATAAGAATTTATATCGCATTATCCAAATGGGGCCCTACATTTGTAATTTTTATATCGCACTTGTCCTGTTAATCAAGTGTGAAAGATGAGCAAAATGAATCAGGCTGAATAAAAGTTCATTGTTCGAGGGATTTTGTGAGTGTATTTTCCTTGAGAAAAAGACAAATAATATGGTTGTATTATTGAGCCACTTTACAGATACCACCAAAGGCAACTTGCTACTGCAATTCATCTCTTGTAAGAATTATTAGAGAGAGAGAGAGAGAGGGAGCTCTTCCTTCTTCCTTCAAACATTCAAACCTTCATCCATTTCATTTCATTAAACCTTTTCTCTAACTTCTCCTAATACGTGAACTCGGAAAATATATCTTTGTTGAAATCCGAATCTGAGAACTATGACTCTCATTTTTACCCCATAATGTTTGTTTCTTCTCTTGATGAAGTCAGCTTTCAATTTTATTTATGATTGATGAATCAGAAAATTGAAGATAATAAACA</genome_strand>
        <mrna_strand>GTCAATGGGCTCGATGACGGGGAAACTCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTCAGTTTGGCTTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG.........................................................................................................................................................................................................................................................................................................................................................GAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG..................................................................................................................................CAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAG..........................................................................................................................................................................................................................................................................................................................................AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E416758" ref_strand="-" ref_description="SGN-E416758 [STM-23-H9]">
      <seq>caatgggctcgatgatggggaaactcagtttcagtttggcttgtctcagacagcactagaaatggcatctatggatagattgctgcacatccctgaggattctgttccttgcaaaattcgtgccaagcgtggttgtgctactcatcctcgcagcattgcagaaagggaaagaagaaccagaattagtgggaaactaaagaagttacaagatcttgttccaaacatggacaagcaaacgagctacgctgacatgctggatctagcagtgcagcacattcgaacccttcaagatcaggttcagaatctgaatacagaacttgaaaactgcaaatgtggatgtaagaaatcaagtcaataacaaaatggaaggaagcactttagctgaagattgacttaaaaggatttttgtcaccattattttgcctcttagaaactcaaatttgtacataaggaagtaaatttcatactagttttttaaagctaaaaagtaaactctcttttgtttttttttccttttccagttagaagactacgtatatgattgttttggattatttctagttttattttccatctaacatttacatttttaatttagttttgagtttattttggttgaagatcataaagctaattgatgatgttgtacaacaactttctctatttcatttttatgtaaaatgaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="23826" stop="25890"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24130" g_stop="24267" g_length="138"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="166" r_length="138" r_score="0.978"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24613" g_stop="24678" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="232" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24809" g_stop="24877" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="233" r_stop="301" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25208" g_stop="25588" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="302" r_stop="675" r_length="374" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="684" polyA_stop="696"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E416758" ref_strand="-">
        <total_alignment_score>0.963</total_alignment_score>
        <cumulative_length_of_scored_exons>654</cumulative_length_of_scored_exons>
        <coverage percentage="0.940" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E416758" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="24130" e_stop="24267"/>
          <exon e_start="24613" e_stop="24678"/>
          <exon e_start="24809" e_stop="24877"/>
          <exon e_start="25208" e_stop="25588"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGGGTGATCTTCATATTTCTTAAGCCATTCCTTTACTTGGCCCTTATAATGAACAAAAAAATAAAAATCCAATTGAACTTTATCAATTTATTTTTCCCCTGCTTCATTTCATTTGATATGGCTTCGATTGAGAATGAATTTCAAGATACTATCTGAAGCTGATGAAACTCTTCCAGCCACTGATTTTAAATGCCAACTTTGCTATTATGTAACAATAGATTTAATTGTCAACATGTAGTAGTTGTGGCATTTGAAATACTTTTCCTCAAAATTTGGATCATCATAGCTATGTTTTGCTTTTACTAATACACAATAATGAACGTTGTATTCTTTTCTCATCTTATGCAGGAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAGGTATAGTTTGCTTCCACTCCACAATATTTTCTCAATTGGAGCTTATTGGAACATGTTTTAGCTGTAAATTTTGTCGCAGCAAACGAGCTACACTCCAATATTAACAACATTTTCTTGTTTGTTTTCGCAGCAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAGGTGAGTGATCAAAATGATCAACCTTACTGCTTTGCAGCTTTACCTAAATTACTTATACTCTATGTTCCTTACACTCTTCAAAGAAACAGCCAGTGTGTTGGATTAGATCCTCCAAAAGCTATTAGTACAACAATTTTGGCCCGAGCAACATATCTTGTATTCTCACATGAGTTTACACCAAACCGAACAATTTAACCTTAATGTATTTGGGATAGATGATGTCTAATATGTTTTGCAAATAAAAAATGATAAATTTTCTAGCCCCACCTTTATAGCTGTGTGATTGAAATAGTCGAAATATAATTTTCACGTTTTCTTATTCTTATGCAGAATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACAACTACTTTCTCTATTTCATTTTTAT</genome_strand>
        <mrna_strand>TTTCAGTTTGGCTTGTCTCAGACAGCACTAGAAATGGCATCTATGGATAGATTGCTGCACATCCCTGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG.........................................................................................................................................................................................................................................................................................................................................................GAAAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG..................................................................................................................................CAAACGAGCTACGCTGACATGCTGGATCTAGCAGTGCAGCACATTCGAACCCTTCAAGATCAGGTTCAG..........................................................................................................................................................................................................................................................................................................................................AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAAGAAATCAAGTCAATAACAAAATGGAAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCCTCTTAGAAACTCAAATTTGTACATAAGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTAAACTCTC--T-TTTGTTTTT-TTTT-CCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTT-ATTTTCCATCTAACATTTACATTTTTAATTTAGTTTTGAGTTTATTTTGGTTGAAGATCAT-AAAGCTAATTGATGATGTTGTACAACAACTTTCTCTATTTCATTTTTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E420524" ref_strand="-" ref_description="SGN-E420524 [STM-31-I12]">
      <seq>cttgcaaaattcgtgccaagcgtggttgtgctactcatcctcgcagcattgcagaaagggaaagaagaaccagaattagtgggaaactaaagaagttacaagatcttgttccaaacatggacaagcaaacgagctacgctgacatgctggatctagcagtgcagcacattcgaacccttcaagatcaggttcagaatctgaatacagaacttgaaaactgcaaatgtggatgtaagaaatcaagtcaataacaaaatggaaggaagcactttagctgaagattgacttaaaaggatttttgtcaccattattttgcctcttagaaactcaaatttgtacataaggaagtaaatttcatactagttttttaaagctaaaaagtaaactctctttttttcaattttttttccttttccagttagaagactacgtatatgattgttttggattatttatatttttttttccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="23909" stop="25784"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24209" g_stop="24267" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="59" r_length="59" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24613" g_stop="24678" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="60" r_stop="125" r_length="66" r_score="0.985"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="24809" g_stop="24877" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="194" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="25208" g_stop="25484" g_length="277"/>
          <reference_exon_boundary r_type="cDNA" r_start="195" r_stop="469" r_length="275" r_score="0.942"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E420524" ref_strand="-">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E420524" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="24209" e_stop="24267"/>
          <exon e_start="24613" e_stop="24678"/>
          <exon e_start="24809" e_stop="24877"/>
          <exon e_start="25208" e_stop="25484"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGGGTGATCTTCATATTTCTTAAGCCATTCCTTTACTTGGCCCTTATAATGAACAAAAAAATAAAAATCCAATTGAACTTTATCAATTTATTTTTCCCCTGCTTCATTTCATTTGATATGGCTTCGATTGAGAATGAATTTCAAGATACTATCTGAAGCTGATGAAACTCTTCCAGCCACTGATTTTAAATGCCAACTTTGCTATTATGTAACAATAGATTTAATTGTCAACATGTAGTAGTTGTGGCATTTGAAATACTTTTCCTCAAAATTTGGATCATCATAGCTATGTTTTGCTTTTACTAATACACAATAATGAACGTTGTATTCTTTTCTCATCTTATGCAGGAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAGGTATAGTTTGCTTCCACTCCACAATATTTTCTCAATTGGAGCTTATTGGAACATGTTTTAGCTGTAAATTTTGTCGCAGCAAACGAGCTACACTCCAATATTAACAACATTTTCTTGTTTGTTTTCGCAGCAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAGGTGAGTGATCAAAATGATCAACCTTACTGCTTTGCAGCTTTACCTAAATTACTTATACTCTATGTTCCTTACACTCTTCAAAGAAACAGCCAGTGTGTTGGATTAGATCCTCCAAAAGCTATTAGTACAACAATTTTGGCCCGAGCAACATATCTTGTATTCTCACATGAGTTTACACCAAACCGAACAATTTAACCTTAATGTATTTGGGATAGATGATGTCTAATATGTTTTGCAAATAAAAAATGATAAATTTTCTAGCCCCACCTTTATAGCTGTGTGATTGAAATAGTCGAAATATAATTTTCACGTTTTCTTATTCTTATGCAGAATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTC</genome_strand>
        <mrna_strand>CTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG.........................................................................................................................................................................................................................................................................................................................................................GAAAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG..................................................................................................................................CAAACGAGCTACGCTGACATGCTGGATCTAGCAGTGCAGCACATTCGAACCCTTCAAGATCAGGTTCAG..........................................................................................................................................................................................................................................................................................................................................AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAAGAAATCAAGTCAATAACAAAATGGAAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCCTCTTAGAAACTCAAATTTGTACATAAGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTAAACTCTCTTT-TTTTCAATTTTTTTTCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTATA-TTTTTTTTTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E617954" ref_strand="+" ref_description="SGN-E617954 [68627]">
      <seq>ttaacttatgcanggaaagaagaacagaaattagtgggaaaacttaagaaagtnacaagacttgttccaaacatggacaagcaaacgagctacgctgacatgctggatctagcagtgcagcacattcgaacccttcaagatcaggttcagaatctgaatacagaacttgaaaactgcaaatgtggatgtaagaaatcaagtcaataacaaaatgggaggaagcactttagctgaagattgacttaaaaggatttttgtcaccattattttgcctcttagaaactcaaatttgtacataaggaagtaaatttcatactagttttttaaagctaaaaagtaaactctcttttgttttttttttttccttttccagttagaagactacgtatatgattgttttggattatttctagttttttttttccatctaacatttacatttttaatttagctttgagtttattttggttgaagatcataaagctaattgatgatgttgtacaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="24300" stop="25864"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24613" g_stop="24678" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="15" r_stop="81" r_length="67" r_score="0.833"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130">
            <donor d_prob="0.997" d_score="0.85"/>
            <acceptor a_prob="0.984" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24809" g_stop="24877" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="82" r_stop="150" r_length="69" r_score="0.971"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330">
            <donor d_prob="0.994" d_score="0.98"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25208" g_stop="25564" g_length="357"/>
          <reference_exon_boundary r_type="cDNA" r_start="151" r_stop="504" r_length="354" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E617954" ref_strand="+">
        <total_alignment_score>0.945</total_alignment_score>
        <cumulative_length_of_scored_exons>492</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E617954" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24613" e_stop="24678"/>
          <exon e_start="24809" e_stop="24877"/>
          <exon e_start="25208" e_stop="25564"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGAAGAACCAGAATTAGTGGG-AAACTAAAG-AAGTTACAAGATCTTGTTCCAAACATGGACAAGGTATAGTTTGCTTCCACTCCACAATATTTTCTCAATTGGAGCTTATTGGAACATGTTTTAGCTGTAAATTTTGTCGCAGCAAACGAGCTACACTCCAATATTAACAACATTTTCTTGTTTGTTTTCGCAGCAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAGGTGAGTGATCAAAATGATCAACCTTACTGCTTTGCAGCTTTACCTAAATTACTTATACTCTATGTTCCTTACACTCTTCAAAGAAACAGCCAGTGTGTTGGATTAGATCCTCCAAAAGCTATTAGTACAACAATTTTGGCCCGAGCAACATATCTTGTATTCTCACATGAGTTTACACCAAACCGAACAATTTAACCTTAATGTATTTGGGATAGATGATGTCTAATATGTTTTGCAAATAAAAAATGATAAATTTTCTAGCCCCACCTTTATAGCTGTGTGATTGAAATAGTCGAAATATAATTTTCACGTTTTCTTATTCTTATGCAGAATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACAA</genome_strand>
        <mrna_strand>GAAAGAAGAACAGAAATTAGTGGGAAAACTTAAGAAAGTNACAAGA-CTTGTTCCAAACATGGACAAG..................................................................................................................................CAAACGAGCTACGCTGACATGCTGGATCTAGCAGTGCAGCACATTCGAACCCTTCAAGATCAGGTTCAG..........................................................................................................................................................................................................................................................................................................................................AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAAGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCCTCTTAGAAACTCAAATTTGTACATAAGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTAAACTCTCTTT-TGTTTTTTT-TTTTTCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTTTTTTTCCATCTAACATTTACATTTTTAATTTAGCTTTGAGTTTATTTTGGTTGAAGATCAT-AAAGCTAATTGATGATGTTGTACAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302680" ref_strand="+" ref_description="SGN-E302680 [cLEY-1-C15]">
      <seq>caagatcttgttccaaacatggacaagcaaacgagctatgctgacatgctggatctagcagtgcagcatattcgaacccttcaagatcaggttcagaatctgaatacagaacttgaaaactgcaaatgtggatgtaggaaatcaagtcaataacaaaatgggaggaagcactttagctgaagattgacttaaaaggatttttgtcaccattattttgcttcttagaaactcaaatttgtacatatggaagtaaatttcatactagttttttaaagctaaaaagtgaactctctttgtttttttttcttttcccttttccagttagaagactacgtatatgattgttttggattatttctagttttcttttttcatctaacatttacatttttaatttatttttgagtttattttgcttgaagatcattnnnnanaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="24352" stop="25838"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24652" g_stop="24678" g_length="27"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="27" r_length="27" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130">
            <donor d_prob="0.997" d_score="0.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24809" g_stop="24877" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="28" r_stop="96" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="25208" g_stop="25536" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="425" r_length="329" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="433" polyA_stop="450"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E302680" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302680" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24652" e_stop="24678"/>
          <exon e_start="24809" e_stop="24877"/>
          <exon e_start="25208" e_stop="25536"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGATCTTGTTCCAAACATGGACAAGGTATAGTTTGCTTCCACTCCACAATATTTTCTCAATTGGAGCTTATTGGAACATGTTTTAGCTGTAAATTTTGTCGCAGCAAACGAGCTACACTCCAATATTAACAACATTTTCTTGTTTGTTTTCGCAGCAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAGGTGAGTGATCAAAATGATCAACCTTACTGCTTTGCAGCTTTACCTAAATTACTTATACTCTATGTTCCTTACACTCTTCAAAGAAACAGCCAGTGTGTTGGATTAGATCCTCCAAAAGCTATTAGTACAACAATTTTGGCCCGAGCAACATATCTTGTATTCTCACATGAGTTTACACCAAACCGAACAATTTAACCTTAATGTATTTGGGATAGATGATGTCTAATATGTTTTGCAAATAAAAAATGATAAATTTTCTAGCCCCACCTTTATAGCTGTGTGATTGAAATAGTCGAAATATAATTTTCACGTTTTCTTATTCTTATGCAGAATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATC</genome_strand>
        <mrna_strand>CAAGATCTTGTTCCAAACATGGACAAG..................................................................................................................................CAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAG..........................................................................................................................................................................................................................................................................................................................................AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E434568" ref_strand="-" ref_description="SGN-E434568 [STM-60-I23]">
      <seq>gcagtgcagcacattcgaacccttcaagatcaggttcagaatctgaatacagaacttgaaaactgcaaatgtggatgtaagaaatcaagtcaataacaaaatggaaggaagcactttagctgaagattgacttaaaaggatttttgtcaccattattttgcctcttagaaactcaaatttgtacataaggaagtaaatttcatactagttttttaaagctaaaaagtaaactctcttttgttttttttttccttttccagttagaagactacgtatatgattgttttggattatttctagttttattttccatctaaaaaaaaaaaaaaaaaagaaaaaaaaaactcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="24539" stop="91945"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24839" g_stop="24877" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="39" r_length="39" r_score="0.974"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.991" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25208" g_stop="25492" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="40" r_stop="319" r_length="280" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="25493" i_stop="26399" i_length="907">
            <donor d_prob="0.000" d_score="0.92"/>
            <acceptor a_prob="0.974" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26400" g_stop="26420" g_length="21"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="340" r_length="21" r_score="0.619"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="26421" i_stop="26515" i_length="95">
            <donor d_prob="0.963" d_score="0.00"/>
            <acceptor a_prob="0.941" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="26516" g_stop="26523" g_length="8"/>
          <reference_exon_boundary r_type="cDNA" r_start="341" r_stop="348" r_length="8" r_score="0.500"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E434568" ref_strand="-">
        <total_alignment_score>0.951</total_alignment_score>
        <cumulative_length_of_scored_exons>353</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E434568" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="24839" e_stop="24877"/>
          <exon e_start="25208" e_stop="25492"/>
          <exon e_start="26400" e_stop="26420"/>
          <exon e_start="26516" e_stop="26523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAGGTGAGTGATCAAAATGATCAACCTTACTGCTTTGCAGCTTTACCTAAATTACTTATACTCTATGTTCCTTACACTCTTCAAAGAAACAGCCAGTGTGTTGGATTAGATCCTCCAAAAGCTATTAGTACAACAATTTTGGCCCGAGCAACATATCTTGTATTCTCACATGAGTTTACACCAAACCGAACAATTTAACCTTAATGTATTTGGGATAGATGATGTCTAATATGTTTTGCAAATAAAAAATGATAAATTTTCTAGCCCCACCTTTATAGCTGTGTGATTGAAATAGTCGAAATATAATTTTCACGTTTTCTTATTCTTATGCAGAATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACAACTACTTTCTCTATTTCATTTTTATGTTCTTCTTGGGAAACAACCATTTACAATTTGAAATCCAACTCTACTCTACAAGGATTTCATGTGTTTTATTTATCGAACTGTTCATTTTCTGTGAAACAAGTCATTTAATTAATATAACGTTTGTATTGAGCCATAAAATCTATTTTTCCCTTCTTACTTGTGTATATCATGAATAAATGTGATTTATCAATGCGGCACTTTAGGATATTTTAATATTTTGCTCATGAATGATGATTTGCTCATTCAGTAATATTGCATAAGAATTGAGTAACTTTTGATATCAATGTGATCTATATTTTGCATATACAATCAAAATTTCAACTTCATATCAATAAGAATTTATATCGCATTATCCAAATGGGGCCCTACATTTGTAATTTTTATATCGCACTTGTCCTGTTAATCAAGTGTGAAAGATGAGCAAAATGAATCAGGCTGAATAAAAGTTCATTGTTCGAGGGATTTTGTGAGTGTATTTTCCTTGAGAAAAAGACAAATAATATGGTTGTATTATTGAGCCACTTTACAGATACCACCAAAGGCAACTTGCTACTGCAATTCATCTCTTGTAAGAATTATTAGAGAGAGAGAGAGAGAGGGAGCTCTTCCTTCTTCCTTCAAACATTCAAACCTTCATCCATTTCATTTCATTAAACCTTTTCTCTAACTTCTCCTAATACGTGAACTCGGAAAATATATCTTTGTTGAAATCCGAATCTGAGAACTATGACTCTCATTTTTACCCCATAATGTTTGTTTCTTCTCTTGATGAAGTCAGCTTTCAATTTTATTTATGATTGATGAATCAGAAAATTGAAGATAATAAACAGGCATAAGAGAAGACAAAAGTTAACTAACTGTAAGTCATCTTCTTCATGAATTACTTTTTCCTATTGATACAAAATTAATAGTGTTATTATATTAGGAAGCCAG</genome_strand>
        <mrna_strand>GCAGTGCAGCACATTCGAACCCTTCAAGATCAGGTTCAG..........................................................................................................................................................................................................................................................................................................................................AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAAGAAATCAAGTCAATAACAAAATGGAAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCCTCTTAGAAACTCAAATTTGTACATAAGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTAAACTCTC-TT-TTGTTTTTT-TTTT-CCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTT-ATTTTCCATCTAAAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAGAAAAAA...............................................................................................AAAACTCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E331265" ref_strand="+" ref_description="SGN-E331265 [cTOD-6-J11]">
      <seq>atagagagagagagagagggagctcttccttcttccttcaaacattcaaaccttcatccatttcatttcattaaaccttttctctaacttctcctaatacgtgaactcggaaaatatatctttgttgaaatccgaatctgagaactatgactctcatttttaccccataatgtttgtttcttctcttgatgaagtcagctttcaattttatttatgattgatgaatcagaaaattgaagataataaacaggcataagagaagacaaaagttaactaactgaagtcttgtacggaagatggctcaaaatgaaattgaagatatgttagatcacctgagaaggatcaagagtggaggtaatctggatagggtcaagatcaatcgaattgagaaacttgaaatggtgttcaagtatcatcatgttcttttgcctgattccatcgtcaaactcaaaaagaaggacaaatggattgcgaaaatggttcagtgggtattggatggaattccggatgaatgtaaaactaaccttaattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="25871" stop="27254"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26171" g_stop="26449" g_length="279"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="279" r_length="279" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26450" i_stop="26701" i_length="252">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.281" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26702" g_stop="26954" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="280" r_stop="532" r_length="253" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E331265" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>532</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E331265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26171" e_stop="26449"/>
          <exon e_start="26702" e_stop="26954"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAGAGAGAGAGAGAGGGAGCTCTTCCTTCTTCCTTCAAACATTCAAACCTTCATCCATTTCATTTCATTAAACCTTTTCTCTAACTTCTCCTAATACGTGAACTCGGAAAATATATCTTTGTTGAAATCCGAATCTGAGAACTATGACTCTCATTTTTACCCCATAATGTTTGTTTCTTCTCTTGATGAAGTCAGCTTTCAATTTTATTTATGATTGATGAATCAGAAAATTGAAGATAATAAACAGGCATAAGAGAAGACAAAAGTTAACTAACTGTAAGTCATCTTCTTCATGAATTACTTTTTCCTATTGATACAAAATTAATAGTGTTATTATATTAGGAAGCCAGTTTCTTTGTTGACGAAAACTGAAATCAAGAAAAAAAGTCTGAGATCATATAAAAAAGGTTTAACTATGCAAAATTTGTTAGATGAAATGGTGCATAAGATGTATAATCTTTCAAAAGACTAGATGAATAAAAATGTCGCTCTTAAAGAAACTAATTCCAAGAGTTGGTACACTTGCAGGAAGTCTTGTACGGAAGATGGCTCAAAATGAAATTGAAGATATGTTAGATCACCTGAGAAGGATCAAGAGTGGAGGTAATCTGGATAGGGTCAAGATCAATCGAATTGAGAAACTTGAAATGGTGTTCAAGTATCATCATGTTCTTTTGCCTGATTCCATCGTCAAACTCAAAAAGAAGGACAAATGGATTGCGAAAATGGTTCAGTGGGTATTGGATGGAATTCCGGATGAATGTAAAACTAACCTTAATTT</genome_strand>
        <mrna_strand>ATAGAGAGAGAGAGAGAGGGAGCTCTTCCTTCTTCCTTCAAACATTCAAACCTTCATCCATTTCATTTCATTAAACCTTTTCTCTAACTTCTCCTAATACGTGAACTCGGAAAATATATCTTTGTTGAAATCCGAATCTGAGAACTATGACTCTCATTTTTACCCCATAATGTTTGTTTCTTCTCTTGATGAAGTCAGCTTTCAATTTTATTTATGATTGATGAATCAGAAAATTGAAGATAATAAACAGGCATAAGAGAAGACAAAAGTTAACTAACT............................................................................................................................................................................................................................................................GAAGTCTTGTACGGAAGATGGCTCAAAATGAAATTGAAGATATGTTAGATCACCTGAGAAGGATCAAGAGTGGAGGTAATCTGGATAGGGTCAAGATCAATCGAATTGAGAAACTTGAAATGGTGTTCAAGTATCATCATGTTCTTTTGCCTGATTCCATCGTCAAACTCAAAAAGAAGGACAAATGGATTGCGAAAATGGTTCAGTGGGTATTGGATGGAATTCCGGATGAATGTAAAACTAACCTTAATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E364772" ref_strand="+" ref_description="SGN-E364772 [cLPT-4-L11]">
      <seq>gagagagagctcttccttcaaacattcaaaccttcatccatttcatttcattaaactttttttctaacttctcttaatacgtgaactcggaaaacatatctttgttgaaatccgaatctgagaactattactctcatttttaccccataatgtttgtttcttctcttgatgaagtcagctttcaattttaattatgattgatgaatcagaaaattgaagataataaacaggcataagagaagacaaaagtttcaagttggtttcacttgttaacttaactgaagtcttgtacggaggatggctcaaaatgaaattgaagatatgttagatcacctgagaaggatcaagagtggaggtaatctggatagggtcaagattaatcgaattgagaaacttgaaatggtgttaaagtatcatcatgttcttttgcctgattccttcgtcaaactcaaaaaggacaaatggattgcgaaaatggttcagtgggtattggatggaattccggatgaatgtaaaactaaccttaatttaacaaggttagaattacatttgttggaattctttgaaggtaaaatcagtttaagttacaaccatgagttgaatgattctgatctgtcgaaatatatggatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="25901" stop="27355"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26190" g_stop="26438" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="248" r_length="248" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="26439" i_stop="26515" i_length="77">
            <donor d_prob="0.794" d_score="1.00"/>
            <acceptor a_prob="0.941" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="26516" g_stop="26548" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="249" r_stop="280" r_length="32" r_score="0.515"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="26549" i_stop="26701" i_length="153">
            <donor d_prob="0.000" d_score="0.00"/>
            <acceptor a_prob="0.281" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="26702" g_stop="27055" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="281" r_stop="631" r_length="351" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E364772" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>636</cumulative_length_of_scored_exons>
        <coverage percentage="1.008" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E364772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26190" e_stop="26438"/>
          <exon e_start="26516" e_stop="26548"/>
          <exon e_start="26702" e_stop="27055"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGCTCTTCCTTCTTCCTTCAAACATTCAAACCTTCATCCATTTCATTTCATTAAACCTTTTCTCTAACTTCTCCTAATACGTGAACTCGGAAAATATATCTTTGTTGAAATCCGAATCTGAGAACTATGACTCTCATTTTTACCCCATAATGTTTGTTTCTTCTCTTGATGAAGTCAGCTTTCAATTTTATTTATGATTGATGAATCAGAAAATTGAAGATAATAAACAGGCATAAGAGAAGACAAAAGTTAACTAACTGTAAGTCATCTTCTTCATGAATTACTTTTTCCTATTGATACAAAATTAATAGTGTTATTATATTAGGAAGCCAGTTTCTTTGTTGACGAAAACTGAAATCAAGAAAAAAAGTCTGAGATCATATAAAAAAGGTTTAACTATGCAAAATTTGTTAGATGAAATGGTGCATAAGATGTATAATCTTTCAAAAGACTAGATGAATAAAAATGTCGCTCTTAAAGAAACTAATTCCAAGAGTTGGTACACTTGCAGGAAGTCTTGTACGGAAGATGGCTCAAAATGAAATTGAAGATATGTTAGATCACCTGAGAAGGATCAAGAGTGGAGGTAATCTGGATAGGGTCAAGATCAATCGAATTGAGAAACTTGAAATGGTGTTCAAGTATCATCATGTTCTTTTGCCTGATTCCATCGTCAAACTCAAAAAGAAGGACAAATGGATTGCGAAAATGGTTCAGTGGGTATTGGATGGAATTCCGGATGAATGTAAAACTAACCTTAATTTAAGAAGGTTAGAATTACATTTGTTGGAATTCTTTGAAGGTAAAATCAGTTTAAGTTACAACCATGAGTTGAATGATTCTGATCTGTCGAAATATATGGATT</genome_strand>
        <mrna_strand>GAGAGAGAGC-TCTTCCTTCAAACATTCAAACCTTCATCCATTTCATTTCATTAAACTTTTTTTCTAACTTCTCTTAATACGTGAACTCGGAAAACATATCTTTGTTGAAATCCGAATCTGAGAACTATTACTCTCATTTTTACCCCATAATGTTTGTTTCTTCTCTTGATGAAGTCAGCTTTCAATTTTAATTATGATTGATGAATCAGAAAATTGAAGATAATAAACAGGCATAAGAGAAGACAAAA.............................................................................GTTTCAAGTTGGTTT-CACTTGTTAACTTAACT.........................................................................................................................................................GAAGTCTTGTACGGAGGATGGCTCAAAATGAAATTGAAGATATGTTAGATCACCTGAGAAGGATCAAGAGTGGAGGTAATCTGGATAGGGTCAAGATTAATCGAATTGAGAAACTTGAAATGGTGTTAAAGTATCATCATGTTCTTTTGCCTGATTCCTTCGTCAAACTC--AAA-AAGGACAAATGGATTGCGAAAATGGTTCAGTGGGTATTGGATGGAATTCCGGATGAATGTAAAACTAACCTTAATTTAACAAGGTTAGAATTACATTTGTTGGAATTCTTTGAAGGTAAAATCAGTTTAAGTTACAACCATGAGTTGAATGATTCTGATCTGTCGAAATATATGGATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E539103" ref_strand="+" ref_description="SGN-E539103 [TUS-58-L1]">
      <seq>tcttgattatcttagtagagctggaaatgaagaaaatttttctcggtgaactaaaggcttccaagtttactcaatcaagaactttcaaggacaagaaattaccaaaaggattttctcatcatctccatagtctgttgatgtatcttagaaacaaaaagcttgagaaatttcctaataataactctcctcaaaatattgatatagcaatagagttcttgttggttttccttgatgctgatgtcggaaatcatgtaattaatggtaactggttgaatgaagttatggaaaaggttggagctatagcgggtgatgttctatatgtaattcaaaagcttcttcctagctctataaaaaaagatgacaatagcaaaataagtctttgctcaatacagatatgggagaaaactaaagatctgaaggcacaagtggagacgcactataaatccttaaaattcactccatcgcaattccccactgttggtggatggagctttctggattctcttatgcggaaactgaaagagatgtcgaaatctaaatcttgtttagatttcctgatgaaacctcttttggggaatttggagaaagagctatcagctcttacatccattttagagaaggatctgtcatctttatcatccattttaagcgatgtcgccaaggtgcaccatgaacatgaaattcttcaagatcttcacaggcgtactatcaattgggcatatgaagcggaagttgcgattgactctattcttgctcagtataatgtcttttggcatattttttgctcacttcct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="27155" stop="28548"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27455" g_stop="28248" g_length="794"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="794" r_length="794" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E539103" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>794</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E539103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27455" e_stop="28248"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTGATTATCTTAGTAGAGCTGGAAATGAAGAAAATTTTTCTCGGTGAACTAAAGGCTTCCAAGTTTACTCAATCAAGAACTTTCAAGGACAAGAAATTACCAAAAGGATTTTCTCATCATCTCCATAGTCTGTTGATGTATCTTAGAAACAAAAAGCTTGAGAAATTTCCTAATAATAACTCTCCTCAAAATATTGATATAGCAATAGAGTTCTTGTTGGTTTTCCTTGATGCTGATGTCGGAAATCATGTAATTAATGGTAACTGGTTGAATGAAGTTATGGAAAAGGTTGGAGCTATAGCGGGTGATGTTCTATATGTAATTCAAAAGCTTCTTCCTAGCTCTATAAAAAAAGATGACAATAGCAAAATAAGTCTTTGCTCAATACAGATATGGGAGAAAACTAAAGATCTGAAGGCACAAGTGGAGACGCACTATAAATCCTTAAAATTCACTCCATCGCAATTCCCCACTGTTGGTGGATGGAGCTTTCTGGATTCTCTTATGCGGAAACTGAAAGAGATGTCGAAATCTAAATCTTGTTTAGATTTCCTGATGAAACCTCTTTTGGGGAATTTGGAGAAAGAGCTATCAGCTCTTACATCCATTTTAGAGAAGGATCTGTCATCTTTATCATCCATTTTAAGCGATGTCGCCAAGGTGCACCATGAACATGAAATTCTTCAAGATCTTCACAGGCGTACTATCAATTGGGCATATGAAGCGGAAGTTGCGATTGACTCTATTCTTGCTCAGTATAATGTCTTTTGGCATATTTTTTGCTCACTTCCT</genome_strand>
        <mrna_strand>TCTTGATTATCTTAGTAGAGCTGGAAATGAAGAAAATTTTTCTCGGTGAACTAAAGGCTTCCAAGTTTACTCAATCAAGAACTTTCAAGGACAAGAAATTACCAAAAGGATTTTCTCATCATCTCCATAGTCTGTTGATGTATCTTAGAAACAAAAAGCTTGAGAAATTTCCTAATAATAACTCTCCTCAAAATATTGATATAGCAATAGAGTTCTTGTTGGTTTTCCTTGATGCTGATGTCGGAAATCATGTAATTAATGGTAACTGGTTGAATGAAGTTATGGAAAAGGTTGGAGCTATAGCGGGTGATGTTCTATATGTAATTCAAAAGCTTCTTCCTAGCTCTATAAAAAAAGATGACAATAGCAAAATAAGTCTTTGCTCAATACAGATATGGGAGAAAACTAAAGATCTGAAGGCACAAGTGGAGACGCACTATAAATCCTTAAAATTCACTCCATCGCAATTCCCCACTGTTGGTGGATGGAGCTTTCTGGATTCTCTTATGCGGAAACTGAAAGAGATGTCGAAATCTAAATCTTGTTTAGATTTCCTGATGAAACCTCTTTTGGGGAATTTGGAGAAAGAGCTATCAGCTCTTACATCCATTTTAGAGAAGGATCTGTCATCTTTATCATCCATTTTAAGCGATGTCGCCAAGGTGCACCATGAACATGAAATTCTTCAAGATCTTCACAGGCGTACTATCAATTGGGCATATGAAGCGGAAGTTGCGATTGACTCTATTCTTGCTCAGTATAATGTCTTTTGGCATATTTTTTGCTCACTTCCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E280953" ref_strand="+" ref_description="SGN-E280953 [cLER-7-I3]">
      <seq>cttgattatcttagtagagctggaaatgaagaaaatttttctcggtgaactaaaggcttccaagtttactcaatcaagaactttcaaggacaagaaattaccaaaaggattttctcatcatctccatagtctggtgatgtatcttagaaacaaaaagcttgagaaatttcctaataataactctcctcaaaatattgatatagcaatagaggtcttgttggttttccttgatgctgatgtcggaaatcatgtaattaatggtaactggttgaatgaagttatggaaaaggttggagctatagcgggtgatgttctatatgtaattcaaaagcttcttcctagctctattaaaaaagatgacaatagccaaataagtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="27156" stop="28132"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="27456" g_stop="27832" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E280953" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280953" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="27456" e_stop="27832"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGATTATCTTAGTAGAGCTGGAAATGAAGAAAATTTTTCTCGGTGAACTAAAGGCTTCCAAGTTTACTCAATCAAGAACTTTCAAGGACAAGAAATTACCAAAAGGATTTTCTCATCATCTCCATAGTCTGTTGATGTATCTTAGAAACAAAAAGCTTGAGAAATTTCCTAATAATAACTCTCCTCAAAATATTGATATAGCAATAGAGTTCTTGTTGGTTTTCCTTGATGCTGATGTCGGAAATCATGTAATTAATGGTAACTGGTTGAATGAAGTTATGGAAAAGGTTGGAGCTATAGCGGGTGATGTTCTATATGTAATTCAAAAGCTTCTTCCTAGCTCTATAAAAAAAGATGACAATAGCAAAATAAGTC</genome_strand>
        <mrna_strand>CTTGATTATCTTAGTAGAGCTGGAAATGAAGAAAATTTTTCTCGGTGAACTAAAGGCTTCCAAGTTTACTCAATCAAGAACTTTCAAGGACAAGAAATTACCAAAAGGATTTTCTCATCATCTCCATAGTCTGGTGATGTATCTTAGAAACAAAAAGCTTGAGAAATTTCCTAATAATAACTCTCCTCAAAATATTGATATAGCAATAGAGGTCTTGTTGGTTTTCCTTGATGCTGATGTCGGAAATCATGTAATTAATGGTAACTGGTTGAATGAAGTTATGGAAAAGGTTGGAGCTATAGCGGGTGATGTTCTATATGTAATTCAAAAGCTTCTTCCTAGCTCTATTAAAAAAGATGACAATAGCCAAATAAGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300728" ref_strand="+" ref_description="SGN-E300728 [cLEW-8-H19]">
      <seq>gacatattaatccagtgactgatgaggatatagtgggttttgggaatgacatagaaaaaatgtttcagtatctgattagaggtacaaatgatctagacgttgtcccaattgtaggcatgggtggacaagggaaaacgacagttgctagaaaggtgtacaatagtgacaacattgtttctcattttgatgttcgagcatggtgcatcgtttcccaaacatataaccggagaaagctattacaagacattttgagtcaagttaccggttccaaggacaaggggtatgaggatgatatccttgctgatgagttgaggaaaagcttaatgggcaagagatatctcattgtcttggatgatatgtgggattgtatggcatgggatgacttaaggctttcctttccagattccggaaatagaagcagaatagtagtaacaactcgacttgagaaagtgggcgaacaagtcaagtgccatactgatccttattctcttccgttcctcacaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="28061" stop="29165"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28361" g_stop="28865" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="505" r_length="505" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E300728" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E300728" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28361" e_stop="28865"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACATATCAATCCAGTGACTGATGAGGATATAGTGGGTTTTGGGAATGACATAGAAAAAATGTTTCAGTATCTGATTAGAGGTACAAATGATCTAGACGTTGTCCCAATTGTAGGCATGGGTGGACAAGGGAAAACGACAGTTGCTAGAAAGGTGTACAATAGTGACAACATTGTTTCTCATTTTGATGTTCGAGCATGGTGCATCGTTTCCCAAACATATAACCGGAGAAAGCTATTACAAGACATTTTGAGTCAAGTTACCGGTTCCAAGGACAAGGGGTATGAGGATGATATCCTTGCTGATGAGTTGAGGAAAAGCTTAATGGGCAAGAGATATCTCATTGTCTTGGATGATATGTGGGATTGTATGGCATGGGATGACTTAAGGCTTTCCTTTCCAGATTCCGGAAATAGAAGCAGAATAGTAGTAACAACTCGACTTGAGAAAGTGGGCGAACAAGTCAAGTGCCATACTGATCCTTATTCTCTTCCGTTCCTCACAAA</genome_strand>
        <mrna_strand>GACATATTAATCCAGTGACTGATGAGGATATAGTGGGTTTTGGGAATGACATAGAAAAAATGTTTCAGTATCTGATTAGAGGTACAAATGATCTAGACGTTGTCCCAATTGTAGGCATGGGTGGACAAGGGAAAACGACAGTTGCTAGAAAGGTGTACAATAGTGACAACATTGTTTCTCATTTTGATGTTCGAGCATGGTGCATCGTTTCCCAAACATATAACCGGAGAAAGCTATTACAAGACATTTTGAGTCAAGTTACCGGTTCCAAGGACAAGGGGTATGAGGATGATATCCTTGCTGATGAGTTGAGGAAAAGCTTAATGGGCAAGAGATATCTCATTGTCTTGGATGATATGTGGGATTGTATGGCATGGGATGACTTAAGGCTTTCCTTTCCAGATTCCGGAAATAGAAGCAGAATAGTAGTAACAACTCGACTTGAGAAAGTGGGCGAACAAGTCAAGTGCCATACTGATCCTTATTCTCTTCCGTTCCTCACAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371690" ref_strand="+" ref_description="SGN-E371690 [TUS-29-M20]">
      <seq>aaaagaagagagttgtgaattgttgcagaaaaaagtgtttcaaaaggaagatttcccgcctgaactacaagatgtgagtcgagcagttgcagaaaaatgcaaaggactgcccctagtggttgtcttggtagctggaataatcaaaaaaaggaaaatggaagaatcttggtggaatgaggtgaaagattctttatttgaccaccttaatcgtgagtcggaagaatatagtctttcaactatgcagttgagttactataacttaaccgactgtttaaagccttgtcttctttatatggggatgtttcaggaggatgcaataattcgagtatctgaattgataagtctatggattgcggaaggatttgtgcagagcattgaatctgggagattgttgatggaagaggcagctgaaggttacttgatggatctcattcagagtaacgtggtaatggtttcaaatagaaggtataatggtaaggtcaaatactgtcaggttcatgacgtagtgcttcacttttgcttggagaagagtctagaagaaaagtttatgttggcagtgaaggggcatgatagccagtttcaaccttttgaatggaaggaaaaccgagtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="28563" stop="29773"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28863" g_stop="29473" g_length="611"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="611" r_length="611" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E371690" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>611</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371690" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28863" e_stop="29473"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAGAGAGTTGTGAATTGTTGCAGAAAAAAGTGTTTCAAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCAGTTGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGATTCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGTCTTTCAACTATGCAGTTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATGTTTCAGGAGGATGCAATAATTCGAGTATCTGAATTGATAAGTCTATGGATTGCGGAAGGATTTGTGCAGAGCATTGAATCTGGGAGATTGTTGATGGAAGAGGCAGCTGAAGGTTACTTGATGGATCTCATTCAGAGTAACGTGGTAATGGTTTCAAATAGAAGGTATAATGGTAAGGTCAAATACTGTCAGGTTCATGACGTAGTGCTTCACTTTTGCTTGGAGAAGAGTCTAGAAGAAAAGTTTATGTTGGCAGTGAAGGGGCATGATAGCCAGTTTCAACCTTTTGAATGGAAGGAAAACCGAGTGA</genome_strand>
        <mrna_strand>AAAAGAAGAGAGTTGTGAATTGTTGCAGAAAAAAGTGTTTCAAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCAGTTGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGATTCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGTCTTTCAACTATGCAGTTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATGTTTCAGGAGGATGCAATAATTCGAGTATCTGAATTGATAAGTCTATGGATTGCGGAAGGATTTGTGCAGAGCATTGAATCTGGGAGATTGTTGATGGAAGAGGCAGCTGAAGGTTACTTGATGGATCTCATTCAGAGTAACGTGGTAATGGTTTCAAATAGAAGGTATAATGGTAAGGTCAAATACTGTCAGGTTCATGACGTAGTGCTTCACTTTTGCTTGGAGAAGAGTCTAGAAGAAAAGTTTATGTTGGCAGTGAAGGGGCATGATAGCCAGTTTCAACCTTTTGAATGGAAGGAAAACCGAGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E280658" ref_strand="+" ref_description="SGN-E280658 [cLER-1-P16]">
      <seq>aaaagaagagagttgtgaattgttgcagaaaaaagtgtttcaaaaggaagatttcccgcctgaactacaagatgtgagtcgagcagttgcagaaaaatgcaaaggactgcccctagtggttgtcttggtagctggaataatcaaaaaaaggaaaatggaagaatcttggtggaatgaggtgaaagattctttatttgaccaccttaatcgtgagtcggaagaatatagtctttcaactatgcagttgagttactataacttaaccgactgtttaaagccttgtcttctttatatggggatgtttcaggaggatgcaataattcgagtatctgaattgataagtctatggattgcggaaggatttgtgcagagcattgaatctgggagattgttgatggaagaggcagctgaaggttacttgatggatctcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="28563" stop="29594"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28863" g_stop="29294" g_length="432"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="432" r_length="432" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E280658" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>432</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E280658" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28863" e_stop="29294"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAGAGAGTTGTGAATTGTTGCAGAAAAAAGTGTTTCAAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCAGTTGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGATTCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGTCTTTCAACTATGCAGTTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATGTTTCAGGAGGATGCAATAATTCGAGTATCTGAATTGATAAGTCTATGGATTGCGGAAGGATTTGTGCAGAGCATTGAATCTGGGAGATTGTTGATGGAAGAGGCAGCTGAAGGTTACTTGATGGATCTCAT</genome_strand>
        <mrna_strand>AAAAGAAGAGAGTTGTGAATTGTTGCAGAAAAAAGTGTTTCAAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCAGTTGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGATTCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGTCTTTCAACTATGCAGTTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATGTTTCAGGAGGATGCAATAATTCGAGTATCTGAATTGATAAGTCTATGGATTGCGGAAGGATTTGTGCAGAGCATTGAATCTGGGAGATTGTTGATGGAAGAGGCAGCTGAAGGTTACTTGATGGATCTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370462" ref_strand="+" ref_description="SGN-E370462 [TUS-29-M19]">
      <seq>aaaagaagagagttgtgaattgttgcagaaaaaagtgtttcaaaaggaagatttcccgcctgaactacaagatgtgagtcgagcagttgcagaaaaatgcaaaggactgcccctagtggttgtcttggtagctggaataatcaaaaaaaggaaaatggaagaatcttggtggaatgaggtgaaagattctttatttgaccaccttaatcgtgagtcggaagaatatagtcttttaactatgcagttgagttactataacttaaccgactgtttaaagccttgtcttctttatatggggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="28563" stop="29463"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28863" g_stop="29163" g_length="301"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="301" r_length="301" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E370462" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>301</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370462" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28863" e_stop="29163"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGAAGAGAGTTGTGAATTGTTGCAGAAAAAAGTGTTTCAAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCAGTTGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGATTCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGTCTTTCAACTATGCAGTTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATG</genome_strand>
        <mrna_strand>AAAAGAAGAGAGTTGTGAATTGTTGCAGAAAAAAGTGTTTCAAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCAGTTGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGATTCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGTCTTTTAACTATGCAGTTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E241579" ref_strand="+" ref_description="SGN-E241579 [cLED-36-E1]">
      <seq>aaaaggaagatttcccgcctgaactacaagatgtgagtcgagcacttgcagaaaaatgcacaggactgcccctagtggttgacttggaagctggaataatcaaaaaaaggaaaatggcagaatcttggtggaatgaggtgaaagatatctttatttgaccaccttaatcgtgagtcggaagaatataggctttcaactatgcaggtgagttactataacttaaccgactgtttaaagccttgtcttctttatatggggatgtttcaggaggatgcaataattcgagtatctgaattgataagtctatggattgctgaaagaattgtgcagagcattgaatctgggagattgatgatggaagaggcagatgaaggttacttgatggatctcattcagagtaacgtggtaatggtttcaaatataaggtataatggtaaggtcaaatactgtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="28604" stop="29653"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28904" g_stop="29353" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="451" r_length="451" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E241579" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E241579" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28904" e_stop="29353"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCAGTTGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGAT-TCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGTCTTTCAACTATGCAGTTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATGTTTCAGGAGGATGCAATAATTCGAGTATCTGAATTGATAAGTCTATGGATTGCGGAAGGATTTGTGCAGAGCATTGAATCTGGGAGATTGTTGATGGAAGAGGCAGCTGAAGGTTACTTGATGGATCTCATTCAGAGTAACGTGGTAATGGTTTCAAATAGAAGGTATAATGGTAAGGTCAAATACTGTC</genome_strand>
        <mrna_strand>AAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCACTTGCAGAAAAATGCACAGGACTGCCCCTAGTGGTTGACTTGGAAGCTGGAATAATCAAAAAAAGGAAAATGGCAGAATCTTGGTGGAATGAGGTGAAAGATATCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGGCTTTCAACTATGCAGGTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATGTTTCAGGAGGATGCAATAATTCGAGTATCTGAATTGATAAGTCTATGGATTGCTGAAAGAATTGTGCAGAGCATTGAATCTGGGAGATTGATGATGGAAGAGGCAGATGAAGGTTACTTGATGGATCTCATTCAGAGTAACGTGGTAATGGTTTCAAATATAAGGTATAATGGTAAGGTCAAATACTGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E247913" ref_strand="+" ref_description="SGN-E247913 [cLEF-47-L13]">
      <seq>cagcgtctttttgggagatggaaaaattaaggcatgttaagatttgggatgctaaatttgatttggaagaggataatcagggatcctccgaattggaaaatttgaggatattacagtatgtaaaatttccaattgatggaagggatagggtggatatgttatcaaggaggtgtccaaatcttcaaaaactgcacatcaacttggaatatcggggcagtaataattcggcagatttattttgtctcacattagagaatcttactcagcttcaaaatcttcgcctaactgttgagaggtccaacattgtatctgggttacaattgccttcaaatttaaacaagttggtactaagtggggctcatatcgaaaacctgagttccttcattgcaggactaccaagcctggagtatctccaattttgtgacccctatgaatctgttcaaatcagagattggtgccttggaggtatcacgttccctaaacttaagttgttgaaactggtgaacttaccgatctcaaggtgggatgcctcanaggaatcgtttccccagctcgaaacac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="29507" stop="30667"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29807" g_stop="30367" g_length="561"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="561" r_length="561" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E247913" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E247913" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29807" e_stop="30367"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGCGTCTTTTTGGGAGATGGAAAAATTAAGGCATGTTAAGATTTGGGATGCTAAATTTGATTTGGAAGAGGATAATCAGGGATCCTCCGAATTGGAAAATTTGAGGATATTACAGTATGTAAAATTTCCAATTGATGGAAGGGATAGGGTGGATATGTTATCAAGGAGGTGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACAC</genome_strand>
        <mrna_strand>CAGCGTCTTTTTGGGAGATGGAAAAATTAAGGCATGTTAAGATTTGGGATGCTAAATTTGATTTGGAAGAGGATAATCAGGGATCCTCCGAATTGGAAAATTTGAGGATATTACAGTATGTAAAATTTCCAATTGATGGAAGGGATAGGGTGGATATGTTATCAAGGAGGTGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCANAGGAATCGTTTCCCCAGCTCGAAACAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E368738" ref_strand="+" ref_description="SGN-E368738 [TUS-22-J16]">
      <seq>tgtccaaatcttcaaaaactgcacatcaacttggaatatcggggcagtaataattcggcagatttattttgtctcacattagagaatcttactcagcttcaaaatcttcgcctaactgttgagaggtccaacattgtatctgggttacaattgccttcaaatttaaacaagttggtactaagtggggctcatatcgaaaacctgagttccttcattgcaggactaccaagcctggagtatctccaattttgtgacccctatgaatctgttcaaatcagagattggtgccttggaggtatcacgttccctaaacttaagttgttgaaactggtgaacttaccgatctcaaggtgggatgcctcagaggaatcgtttccccagctcgaaacacttgttataaaaaggtgtaaccacctcaaggagatcccccttagctttgctgatattccaacactgaagcagattaagttgattaggtgcgagaacgaatctctcaaggattcagctgtggagattaagaaagacgttgaagagaatgaaggaaacgaccgtattgacctcattatcaaaggatggtagggaatataattcgagatgaaacatcaaaatcacagacagagtggccggggaataacaaggcaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="29677" stop="31091"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29977" g_stop="30546" g_length="570"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="570" r_length="570" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30625" g_stop="30657" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="571" r_stop="603" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30658" i_stop="30752" i_length="95">
            <donor d_prob="0.948" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30753" g_stop="30791" g_length="39"/>
          <reference_exon_boundary r_type="cDNA" r_start="604" r_stop="642" r_length="39" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E368738" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>642</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E368738" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29977" e_stop="30546"/>
          <exon e_start="30625" e_stop="30657"/>
          <exon e_start="30753" e_stop="30791"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAAGTAAGTAGAAACAAACTCCTAAATATGTTCTGTTTTTTTGAGTATCTAACTAACTTGACACCACTATGTATAATACAGGGATGGTAGGGAATATAATTCGAGATGAAACATGTACGTGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAA</genome_strand>
        <mrna_strand>TGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA..............................................................................GGATGGTAGGGAATATAATTCGAGATGAAACAT...............................................................................................CAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E237622" ref_strand="+" ref_description="SGN-E237622 [cLED-19-I1]">
      <seq>tgtccaaatcttcaaaaactgcacatcaacttggaatatcggggcagtaataattcggcagatttattttgtctcacattagagaatcttactcagcttcaaaatcttcgcctaactgttgagaggtccaacattgtatctgggttacaattgccttcaaatttaaacaagttggtactaagtggggctcatatcgaaaacctgagttccttcattgcaggactaccaagcctggagtatctccaattttgtgacccctatgaatctgttcaaatcagagattggtgccttggaggtatcacgttccctaaacttaagttgttgaaactggtgaacttaccgatctcaaggtgggatgcctcagaggaatcgtttccccagctcgaaacacttgttataaaaaggtgtaaccacctcaaggagatcccccttagctttgctgatattccaacactgaagcagattaagttgattaggtgcgagaacgaatctctcaaggattcagctgtggag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="29677" stop="30789"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="29977" g_stop="30489" g_length="513"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E237622" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>513</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E237622" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="29977" e_stop="30489"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAG</genome_strand>
        <mrna_strand>TGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E548165" ref_strand="+" ref_description="SGN-E548165 [TUS-58-L1](-)">
      <seq>attagagaatcttactcagcttcaaaatcttcgcctaactgttgagaggtccaacattgtatctgggttacaattgccttcaaatttaaacaagttggtactaagtggggctcatatcgaaaacctgagttccttcattgcaggactaccaagcctggagtatctccaattttgtgacccctatgaatctgttcaaatcagagattggtgccttggaggtatcacgttccctaaacttaagttgttgaaactggtgaacttaccgatctcaaggtgggatgcctcagaggaatcgtttccccagctcgaaacacttgttataaaaaggtgtaaccacctcaaggagatcccccttagctttgctgatattccaacactgaagcagattaagttgattaggtgcgagaacgaatctctcaaggattcagctgtggagattaagaaagacgttgaagagaatgaaggaaacgaccgtattgacctcattatcaaaggatggtagggaatataattcgagatgaaacatcaaaatcacagacagagtggccggggaataacaaggcaagaagctctctctcaagttcacaaattttcgcagcattaaaaactcaaaggttttgatagtgtcttagatataagctcattgacatgatacttttgctgtgcactcaaaattttgaagtttgttattgttgaattattgtaatttgtggcacctattgaaaaattttaatcacaaacatttcttttttaataaaagtaacatgaatgatggtttgctcattcatcaaagtgtaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="29754" stop="31323"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30054" g_stop="30546" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30625" g_stop="30657" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="494" r_stop="526" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30658" i_stop="30752" i_length="95">
            <donor d_prob="0.948" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30753" g_stop="31024" g_length="272"/>
          <reference_exon_boundary r_type="cDNA" r_start="527" r_stop="798" r_length="272" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="799" polyA_stop="808"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E548165" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>798</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E548165" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30054" e_stop="30546"/>
          <exon e_start="30625" e_stop="30657"/>
          <exon e_start="30753" e_stop="31024"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAAGTAAGTAGAAACAAACTCCTAAATATGTTCTGTTTTTTTGAGTATCTAACTAACTTGACACCACTATGTATAATACAGGGATGGTAGGGAATATAATTCGAGATGAAACATGTACGTGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTCATCAAAGTGTAT</genome_strand>
        <mrna_strand>ATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA..............................................................................GGATGGTAGGGAATATAATTCGAGATGAAACAT...............................................................................................CAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTCATCAAAGTGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E288588" ref_strand="+" ref_description="SGN-E288588 [cLES-8-B14]">
      <seq>ttcgcctaactgttgagaggtccaacattgtatctgggttacaattgccttcaaatttaaacaagttggtactaagtggggctcatatcgaaaacctgagttccttcattgcaggactaccaagcctggagtatctccaattttgtgacccctatgaatctgttcaaatcagagattggtgccttggaggtatcacgttccctaaacttaagttgttgaaactggtgaacttaccgatctcaaggtgggatgcctcagaggaatcgtttccccagctcgaaacacttgttataaaaaggtgtaaccacctcaaggagatcccccttagctttgctgatattccaacactgaagcagattaagttgattaggtgcgagaacgaatctctcaaggattcagctgtggagattaagaaagacgttgaagagaatgaaggaaacgaccgtattgacctcattatcaaaggatggtagggaatataattcgagatgaaacatcaaaatcacagacagag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="29783" stop="31069"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30083" g_stop="30546" g_length="464"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="464" r_length="464" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30625" g_stop="30657" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="465" r_stop="497" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30658" i_stop="30752" i_length="95">
            <donor d_prob="0.948" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30753" g_stop="30769" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="498" r_stop="514" r_length="17" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E288588" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>514</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E288588" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30083" e_stop="30546"/>
          <exon e_start="30625" e_stop="30657"/>
          <exon e_start="30753" e_stop="30769"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAAGTAAGTAGAAACAAACTCCTAAATATGTTCTGTTTTTTTGAGTATCTAACTAACTTGACACCACTATGTATAATACAGGGATGGTAGGGAATATAATTCGAGATGAAACATGTACGTGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAG</genome_strand>
        <mrna_strand>TTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA..............................................................................GGATGGTAGGGAATATAATTCGAGATGAAACAT...............................................................................................CAAAATCACAGACAGAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E251865" ref_strand="-" ref_description="SGN-E251865 [cLEG-14-F12]">
      <seq>agtatctccaattttgtgacccctatgaatctgttcaaatcagagattggtgccttggaggtatcacgttccctaaacttaagttgttgaaactggtgaacttaccgatctcaaggtgggatgcctcagaggaatcgtttccccagctcgaaacacttgttataaaaaggtgtaaccacctcaaggagatcccccttagctttgctgatattccaacactgaagcagattaagttgattaggtgcgagaacgaatctctcaaggattcagctgtggagattaagaaagacgttgaagagaatgaaggaaacgaccgtattgacctcattatcaaaggatggtagggaatataattcgagatgaaacatcaaaatcacagacagagtggccggggaataacaaggcaagaagctctctctcaagttcacaaattttcgcagcattaaaaactcaaaggttttgatagtgtcttagatataagctcattgacatgatacttttgctgtgcactcaaaattttgaagtttgttattgttgaattattgtaatttgtcccacctattgccaaattttaatcacaaacatttcttttttaataaaagtaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="29912" stop="67792"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30212" g_stop="30546" g_length="335"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="335" r_length="335" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30625" g_stop="30657" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="336" r_stop="368" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30658" i_stop="30752" i_length="95">
            <donor d_prob="0.948" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30753" g_stop="30990" g_length="238"/>
          <reference_exon_boundary r_type="cDNA" r_start="369" r_stop="606" r_length="238" r_score="0.979"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="30991" i_stop="31133" i_length="143">
            <donor d_prob="0.000" d_score="0.94"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31134" g_stop="31148" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="607" r_stop="621" r_length="15" r_score="0.733"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E251865" ref_strand="-">
        <total_alignment_score>0.991</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E251865" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="30212" e_stop="30546"/>
          <exon e_start="30625" e_stop="30657"/>
          <exon e_start="30753" e_stop="30990"/>
          <exon e_start="31134" e_stop="31148"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAAGTAAGTAGAAACAAACTCCTAAATATGTTCTGTTTTTTTGAGTATCTAACTAACTTGACACCACTATGTATAATACAGGGATGGTAGGGAATATAATTCGAGATGAAACATGTACGTGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTCATCAAAGTGTATGTACGGCATGATTTCATATCGCCTATCCAAATGAATTTGTAAACTTTTATTTGTAAAATCAATTTTCCCTTCTTCCCCATGTATGGCATGAACTCTCTACTGGTATAAGTAACAAAATATAAAA</genome_strand>
        <mrna_strand>AGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA..............................................................................GGATGGTAGGGAATATAATTCGAGATGAAACAT...............................................................................................CAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTCCCACCTATTGCCAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAAA...............................................................................................................................................AAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E371689" ref_strand="+" ref_description="SGN-E371689 [TUS-29-M20](-)">
      <seq>gacccctatgaatctgttcaaatcaaagattggtgccttggaggtatcacgttccctaaacttaagttgttgaaactggtgaacttaccgatctcaaggtgggatgcctcagaggaatcgtttccccagctcgaaacacttgttataaaaaggtgtaaccacctcaaggagatcccccttagctttgctgatattccaacactgaagcagattaagttgattaggtgcgagaacgaatctctcaaggattcagctgtggagattaagaaagacgttgaagagaatgaaggaaacgaccgtattgacctcattatcaaaggatggtagggaatataattcgagatgaaacatgtacgtgcctgtaatcacaacaatgctatatattccttcttctaatttgacgcttgcttttgcttaattgctccatgttgatttcaaaattgcagcaaaatcacagacagagtggccggggaataacaaggcaagaagctctctctcaagttcacaaattttcgcagcattaaaaactcaaaggttttgatagtgtcttagatataagctcattgacatgatacttttgctgtgcactcaaaattttgaagtttgttattgttgaattattgtaatttgtggcacctattgaaaaattttaatcacaaacatttcttttttaataaaagtaacatgaatgatggattgctcattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="29929" stop="31318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30229" g_stop="30546" g_length="318"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="318" r_length="318" r_score="0.997"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30625" g_stop="31020" g_length="396"/>
          <reference_exon_boundary r_type="cDNA" r_start="319" r_stop="714" r_length="396" r_score="0.985"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E371689" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>714</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E371689" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30229" e_stop="30546"/>
          <exon e_start="30625" e_stop="31020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAAGTAAGTAGAAACAAACTCCTAAATATGTTCTGTTTTTTTGAGTATCTAACTAACTTGACACCACTATGTATAATACAGGGATGGTAGGGAATATAATTCGAGATGAAACATGTACGTGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTCATCAAAGT</genome_strand>
        <mrna_strand>GACCCCTATGAATCTGTTCAAATCAAAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA..............................................................................GGATGGTAGGGAATATAATTCGAGATGAAACATGTACGTGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGATTGCTCATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300415" ref_strand="+" ref_description="SGN-E300415 [cLET-45-A18]">
      <seq>tacggagatccctcttagctttgctgatattccaacactgaagcagattaagttgattaggtgcgagaacgaatctctcaaggattcagctgtggagattaagaaagacgttgaagagaatgaaggaaacgaccgtattgacctcattatcaaaggatggtagggaatataattcgagatgaaacatcaaaatcacagacagagtggccggggaataacaaggcaagaagctctctctcaagttcacaaattttcgcagcattaaaaactcaaaggttttgatagtgtcttagatataagctcattgacatgatacttttgctgtgcactcaagattttgaagtttgttattgttgaattattgtaatttgtggcacctattgaaaaattttaatcacaaacatttcttttttaataaaagtaacatgaatgatggtttgctcattaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="30094" stop="31318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30393" g_stop="30546" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="154" r_length="154" r_score="0.981"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30625" g_stop="30657" g_length="33"/>
          <reference_exon_boundary r_type="cDNA" r_start="155" r_stop="187" r_length="33" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30658" i_stop="30752" i_length="95">
            <donor d_prob="0.948" d_score="0.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30753" g_stop="31020" g_length="268"/>
          <reference_exon_boundary r_type="cDNA" r_start="188" r_stop="455" r_length="268" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E300415" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E300415" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30393" e_stop="30546"/>
          <exon e_start="30625" e_stop="30657"/>
          <exon e_start="30753" e_stop="31020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAAGTAAGTAGAAACAAACTCCTAAATATGTTCTGTTTTTTTGAGTATCTAACTAACTTGACACCACTATGTATAATACAGGGATGGTAGGGAATATAATTCGAGATGAAACATGTACGTGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTCATCAAAGT</genome_strand>
        <mrna_strand>TACGGAGATCCCTCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA..............................................................................GGATGGTAGGGAATATAATTCGAGATGAAACAT...............................................................................................CAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAGATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E370461" ref_strand="+" ref_description="SGN-E370461 [TUS-29-M19](-)">
      <seq>tgcctgtaataacaacaatgctatatattcattcttataatttgacgcatgcttttgcttaattgctccatgttgatttaaaaattgcagcaaaatcacagacagagtggccggggaataacaaggcaagaagctctctctcaagttcacaaattttcgcagcattaaaaactcaaaggttttgatagtgtcttagatataagctcattgacatgatacttttgctgtgcactcaaaattttgaagtttgttattgttgaattattgtaatttgtggcacctattgaaaaattttaatcacaaacatttcttttttaataaaagtaacatgaatgatggtttgctcattaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="30363" stop="31318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30663" g_stop="31020" g_length="358"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="358" r_length="358" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E370461" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>358</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E370461" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30663" e_stop="31020"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTCATCAAAGT</genome_strand>
        <mrna_strand>TGCCTGTAATAACAACAATGCTATATATTCATTCTTATAATTTGACGCATGCTTTTGCTTAATTGCTCCATGTTGATTTAAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E258561" ref_strand="+" ref_description="SGN-E258561 [cLEG-47-L17]">
      <seq>aaacgtggcaaccatagcgggtgatgttctatacgtaattcaaaagcttcttcctagatcaataagcaaagacgatgacactagcaagataaacatttactcgatgcaggtattgggagaaaactaaagatctngaaggcacaagtangagacgtactac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="34493" stop="35249"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="34793" g_stop="34949" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="160" r_length="160" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E258561" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>157</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E258561" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="34793" e_stop="34949"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAACGTGGCAACCATAGCGGGTGATGTTCTATACGTAATTCAAAAGCTTCTTCCTAGATCAATAAGCAAAGACGATGACACTAGCAAGATAAACATTTACTCGATGCAGGTATT-GGAGAAAACTAAAGATCT-GAAGGCACAAGTA-GAGACGTACTAC</genome_strand>
        <mrna_strand>AAACGTGGCAACCATAGCGGGTGATGTTCTATACGTAATTCAAAAGCTTCTTCCTAGATCAATAAGCAAAGACGATGACACTAGCAAGATAAACATTTACTCGATGCAGGTATTGGGAGAAAACTAAAGATCTNGAAGGCACAAGTANGAGACGTACTAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E245684" ref_strand="+" ref_description="SGN-E245684 [cLEF-48-I15]">
      <seq>attaacgtgtctgcattgttaagtttatggttagcggaagacttcgttcagaacattaaatctgctgaagattacttgatgaatctcattagcagtaacgtggtaatggtttcaaagaaagaatataatggcaagatcaaatactgtgaggttcatgatgtagtgcttcacttttgcttggagaagagtagagaagaaaattttatgttggttgcgaagggaaatcatagtcaatttcaatcttttgtttggaagcaaagtcgagtgagcttcaatttgattgaagagaattccaagtttgcatccaaaacaaggaagtgttcccatcaaccgttgaggtcactgataacgaacggagcatctttttatataatgtccttaagttcttggattcataatttgcgacttcttaaggtcttggttttgagttcctatgaagttgactatgtgaattcagctacactgaaaccacttaattacctgaagtacctcggagtaagggcaactacgttctattttgatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="35928" stop="37051"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36228" g_stop="36751" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="524" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E245684" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>524</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E245684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36228" e_stop="36751"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAACGTGTCTGCATTGTTAAGTTTATGGTTAGCGGAAGACTTCGTTCAGAACATTAAATCTGCTGAAGATTACTTGATGAATCTCATTAGCAGTAACGTGGTAATGGTTTCAAAGAAAGAATATAATGGCAAGATCAAATACTGTGAGGTTCATGATGTAGTGCTTCACTTTTGCTTGGAGAAGAGTAGAGAAGAAAATTTTATGTTGGTTGCGAAGGGAAATCATAGTCAATTTCAATCTTTTGTTTGGAAGCAAAGTCGAGTGAGCTTCAATTTGATTGAAGAGAATTCCAAGTTTGCATCCAAAACAAGGAAGTGTTCCCATCAACCGTTGAGGTCACTGATAACGAACGGAGCATCTTTTTATATAATGTCCTTAAGTTCTTGGATTCATAATTTGCGACTTCTTAAGGTCTTGGTTTTGAGTTCCTATGAAGTTGACTATGTGAATTCAGCTACACTGAAACCACTTAATTACCTGAAGTACCTCGGAGTAAGGGCAACTACGTTCTATTTTGATCG</genome_strand>
        <mrna_strand>ATTAACGTGTCTGCATTGTTAAGTTTATGGTTAGCGGAAGACTTCGTTCAGAACATTAAATCTGCTGAAGATTACTTGATGAATCTCATTAGCAGTAACGTGGTAATGGTTTCAAAGAAAGAATATAATGGCAAGATCAAATACTGTGAGGTTCATGATGTAGTGCTTCACTTTTGCTTGGAGAAGAGTAGAGAAGAAAATTTTATGTTGGTTGCGAAGGGAAATCATAGTCAATTTCAATCTTTTGTTTGGAAGCAAAGTCGAGTGAGCTTCAATTTGATTGAAGAGAATTCCAAGTTTGCATCCAAAACAAGGAAGTGTTCCCATCAACCGTTGAGGTCACTGATAACGAACGGAGCATCTTTTTATATAATGTCCTTAAGTTCTTGGATTCATAATTTGCGACTTCTTAAGGTCTTGGTTTTGAGTTCCTATGAAGTTGACTATGTGAATTCAGCTACACTGAAACCACTTAATTACCTGAAGTACCTCGGAGTAAGGGCAACTACGTTCTATTTTGATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302221" ref_strand="+" ref_description="SGN-E302221 [cLEW-19-C8]">
      <seq>gacttcttaaggtcttggttttgagttcctatgaagttgagtatgtgaattcagctacactgaaaccacttaattacctgaagtacctcggagtaagggcaactacgttctattttgatcgagaatcacatctgccccatcttgaaactttaattgtgaagaatgatagatcagttatgttacgagggtgtttttgggaaatggaacaattaaggcatgttgagatcaatgatgctgaatttgataagcaggggctctttgaaggatcctctaaattggaaaatttgaggatattaaagaacattgttggatttccaattgatagggcggatgtgttatcaaggaggtgtcctaatcttcaacaacttcaaatcgaatttggatcttttgcagaacctctttggctcacattggagaatcttacccagcttcaaatacttgacctttcctttaggttgttccacatgctatctgggttacaattgccttcaaatttaaagatgttggtactaagagacgctgatctagaaaacctaacttccttctttgctggacta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="36331" stop="37487"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36631" g_stop="37187" g_length="557"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="557" r_length="557" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E302221" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302221" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36631" e_stop="37187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACTTCTTAAGGTCTTGGTTTTGAGTTCCTATGAAGTTGACTATGTGAATTCAGCTACACTGAAACCACTTAATTACCTGAAGTACCTCGGAGTAAGGGCAACTACGTTCTATTTTGATCGAGAATCACATCTGCCCCATCTTGAAACTTTAATTGTGAAGAATGATAGATCAGTTATGTTACGAGGGTGTTTTTGGGAAATGGAACAATTAAGGCATGTTGAGATCAATGATGCTGAATTTGATAAGCAGGGGCTCTTTGAAGGATCCTCTAAATTGGAAAATTTGAGGATATTAAAGAACATTGTTGGATTTCCAATTGATAGGGCGGATGTGTTATCAAGGAGGTGTCCTAATCTTCAACAACTTCAAATCGAATTTGGATCTTTTGCAGAACCTCTTTGGCTCACATTGGAGAATCTTACCCAGCTTCAAATACTTGACCTTTCCTTTAGGTTGTTCCACATGCTATCTGGGTTACAATTGCCTTCAAATTTAAAGATGTTGGTACTAAGAGACGCTGATCTAGAAAACCTAACTTCCTTCTTTGCTGGACTA</genome_strand>
        <mrna_strand>GACTTCTTAAGGTCTTGGTTTTGAGTTCCTATGAAGTTGAGTATGTGAATTCAGCTACACTGAAACCACTTAATTACCTGAAGTACCTCGGAGTAAGGGCAACTACGTTCTATTTTGATCGAGAATCACATCTGCCCCATCTTGAAACTTTAATTGTGAAGAATGATAGATCAGTTATGTTACGAGGGTGTTTTTGGGAAATGGAACAATTAAGGCATGTTGAGATCAATGATGCTGAATTTGATAAGCAGGGGCTCTTTGAAGGATCCTCTAAATTGGAAAATTTGAGGATATTAAAGAACATTGTTGGATTTCCAATTGATAGGGCGGATGTGTTATCAAGGAGGTGTCCTAATCTTCAACAACTTCAAATCGAATTTGGATCTTTTGCAGAACCTCTTTGGCTCACATTGGAGAATCTTACCCAGCTTCAAATACTTGACCTTTCCTTTAGGTTGTTCCACATGCTATCTGGGTTACAATTGCCTTCAAATTTAAAGATGTTGGTACTAAGAGACGCTGATCTAGAAAACCTAACTTCCTTCTTTGCTGGACTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E203944" ref_strand="+" ref_description="SGN-E203944 [cLEC-22-I9]">
      <seq>tcttacccagcttcaaatacttgacctttcctttaggttgttccacatgctatctgggttacaattgccttcaaatttaaagatgttggtactaagagacgctgatctagaaaacctaacttccttctttgctggactaccaagcctggagtatcttcaattaacaaatatgtattttcctcaatcagaatggtgccttggagatatcacgtttcataaactcaagttgttgaaactggtgcagttagatatctcaaggtgggatgtctcggaggaatcctttcccctgcttgaaacaatcgttataagatggtgccataacctcgaggaaatccccattagctttgcagatgttccaacactgaaacagattaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="36749" stop="37725"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37049" g_stop="37425" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="377" r_length="377" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E203944" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E203944" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37049" e_stop="37425"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTTACCCAGCTTCAAATACTTGACCTTTCCTTTAGGTTGTTCCACATGCTATCTGGGTTACAATTGCCTTCAAATTTAAAGATGTTGGTACTAAGAGACGCTGATCTAGAAAACCTAACTTCCTTCTTTGCTGGACTACCAAGCCTGGAGTATCTTCAATTAACAAATATGTATTTTCCTCAATCAGAATGGTGCCTTGGAGATATCACGTTTCATAAACTCAAGTTGTTGAAACTGGTGCAGTTAGATATCTCAAGGTGGGATGTCTCGGAGGAATCCTTTCCCCTGCTTGAAACAATCGTTATAAGATGGTGCCATAACCTCGAGGAAATCCCCATTAGCTTTGCAGATGTTCCAACACTGAAACAGATTAAGT</genome_strand>
        <mrna_strand>TCTTACCCAGCTTCAAATACTTGACCTTTCCTTTAGGTTGTTCCACATGCTATCTGGGTTACAATTGCCTTCAAATTTAAAGATGTTGGTACTAAGAGACGCTGATCTAGAAAACCTAACTTCCTTCTTTGCTGGACTACCAAGCCTGGAGTATCTTCAATTAACAAATATGTATTTTCCTCAATCAGAATGGTGCCTTGGAGATATCACGTTTCATAAACTCAAGTTGTTGAAACTGGTGCAGTTAGATATCTCAAGGTGGGATGTCTCGGAGGAATCCTTTCCCCTGCTTGAAACAATCGTTATAAGATGGTGCCATAACCTCGAGGAAATCCCCATTAGCTTTGCAGATGTTCCAACACTGAAACAGATTAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E450185" ref_strand="+" ref_description="SGN-E450185 [cSTS-8-L9]">
      <seq>atcaaatacataggtttatccgaggcttgtgcagcaacaatcagaagggtacacgcggtgcatccaataacagctgttcagatggagtggtctttgtggaccagagatctggaggaagaaatagttccaacttgcagagaattaggaattggaattgttccgtatagtcctcttggacgaggattcttctcagcaggtccagagttgattgagagcttggccgagggcgacttccgcaagaatataccaaggttcaagcctgaaaattttgagcagaacaagcaaatatacgagcaagtcaaggaaacagcatcaagaaagggatgcaccacatcacaacttgcattggcttggattcttcacaaaggagatgacatatgccccatacccggtaccaccaagattgacaacctcaacgaaaatatcgaagccatatctgtaaacctgacaactgatgaaatgaagcagttagagtcctgtgctgctgaagatatggttaaaggtgaaaggcacgcattcatgtgggcaacttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="40455" stop="38446"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40155" g_stop="40019" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="137" r_length="137" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40018" i_stop="39950" i_length="69">
            <donor d_prob="0.810" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="39949" g_stop="39847" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="138" r_stop="240" r_length="103" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="39846" i_stop="39039" i_length="808">
            <donor d_prob="0.939" d_score="0.98"/>
            <acceptor a_prob="0.928" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39038" g_stop="38746" g_length="293"/>
          <reference_exon_boundary r_type="cDNA" r_start="241" r_stop="533" r_length="293" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E450185" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>533</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E450185" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40155" e_stop="40019"/>
          <exon e_start="39949" e_stop="39847"/>
          <exon e_start="39038" e_stop="38746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCAAATATATAGGTTTATCTGAGGCTTGCGCAGCAACAATCAGAAGGGCACACGCGGTGCATCCAATAACAGCTGTTCAGATGGAGTGGTCATTGTGGACCAGAGATCTTGAGGAAGAAATAGTTCCAACTTGCAGGTAATGTGTCTCTTAGAGTTCACTCTTTCAGATAGTTTGAAGGTTCTTCTGAGTAAATGCCTTTTCCAGAGAATTAGGAATTGGAATTGTTCCGTATAGTCCTCTCGGACGAGGATTCTTCTCAGCAGGTCCAGAGTTGATTGAGAGCTTGGCCGAGGGAGACTTCCGCAAGGTTGGTCTAGTTAATTGCACTGTCTTCGATCTTGCATGATTTTCATTTGCACTTAGCCACTTACCTCCATTAGCTGCATATCATACCCATCATTTTCCTTTTAAACCAAAATTCTGCAACATGTGTCATTGGCTTTTTGTGAAACTCTCAAAGCCTCTCCTTTGGAGAGCTCAATATTAGCATCAACGTTGTGACTTTCCTACTCAGAACCAACGGCTTGCTGATTAACTGAGCTCGACCAATCTACCAGTACTGATCTTGATGAGATTTCGTTAGTATTGATGAATTAAGGCTACGAAACACATGCTACTTATGAATAAGGCGATCTGAATACAAGATCAACGAGTCTTAACTTCTAGTGCAAATTCGGACATAAAAAAACACTCTTTATATATTAACATGCTTAGAGTGTACAAAATATGTACTTCTATCCCACAAAGAATGGCGGGTCACAGTGTCATGGTCAATGCATCCAAATTTTTGGTATATCTGAATTATAGAAACTTAACTAGAAATCACAATATTTATAATTAGAACGATACAAAAATAGAGTTGTTTAAACAAAGTTGTCATCAAAGAAAAAACTGTTTCGGTTCATTGATATTGGGTAACTCTATCCATCAAGGCATAGACAGATAGAAAGAAATCACCTGGTCTTTTTTATTTGAACTTGAACCTCATGGTTCTCAATCCAGTTTGCCAACTCATCCTTATCGCTCGAAATCTCTTCTGATACAGCACGTTATAATTAACGTATAAAACAATACATATAATCGGGATGGCTGATGTCATTTGCTTTTTTTTCCAGAATATACCAAGGTTCAAGCCTGAAAATTTTGAGCACAACAAGCAAATATACGAGCAAGTCAAGGAAATAGCATCAAGAAAGGGATGCACCACATCACAACTTGCATTGGCTTGGATTCTTCACAAAGGAGATGACATATGCCCCATACCCGGTACCACCAAGATTGACAATCTCAACGAAAATATCGAAGCCATATCTGTAAAGCTGACAATTGATGAAATGATGCAGTTAGAGTCCTGTGCTGCTGAAGATATGGTTAAAGGCGAAAGGCACGCATTCATGTGGGCAACTTG</genome_strand>
        <mrna_strand>ATCAAATACATAGGTTTATCCGAGGCTTGTGCAGCAACAATCAGAAGGGTACACGCGGTGCATCCAATAACAGCTGTTCAGATGGAGTGGTCTTTGTGGACCAGAGATCTGGAGGAAGAAATAGTTCCAACTTGCAG.....................................................................AGAATTAGGAATTGGAATTGTTCCGTATAGTCCTCTTGGACGAGGATTCTTCTCAGCAGGTCCAGAGTTGATTGAGAGCTTGGCCGAGGGCGACTTCCGCAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATATACCAAGGTTCAAGCCTGAAAATTTTGAGCAGAACAAGCAAATATACGAGCAAGTCAAGGAAACAGCATCAAGAAAGGGATGCACCACATCACAACTTGCATTGGCTTGGATTCTTCACAAAGGAGATGACATATGCCCCATACCCGGTACCACCAAGATTGACAACCTCAACGAAAATATCGAAGCCATATCTGTAAACCTGACAACTGATGAAATGAAGCAGTTAGAGTCCTGTGCTGCTGAAGATATGGTTAAAGGTGAAAGGCACGCATTCATGTGGGCAACTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374785" ref_strand="+" ref_description="SGN-E374785 [TUS-14-H4](-)">
      <seq>gcattccggtcacaggttcttgtggtctttaagaaaatctccaccaaagggaaaagtagatataccaacaagttacagcgactatgaagaagttttgccaaaaggattcttggagagaacaaaagaaagaggaaaaataataggatgggcaccacaagtaacaattttatctcatccatcaataggaggatttgtgtcccattgtggatggaattcaatactagaaagtgtacattttggtgtaccaattgcaacttggccactctatgctgaacaacaaatgaatgcatttttattagtgaaagaattaggacttggtgaagagataagattggactatgctgttgattttgaagggaaaaataatcaagttgatacagtaagtgctcaagaaattgaaagtggtttattaaagttgatggtaaaaagtgaagaaaatgaagtgaggaaaaaaatgaaggagaagagtagagtagctatggaggaaggtggatcatcttataactcacttggacttctaattaaggatgtaatcacaaatatttaattttcttatagtatatgaagaagcaaaacaagagaagatatatggtatttgaggagatatgtagtattatgatttatggtcatttttaatatttgtacactttcaatatttattcaatgcgttcacttcaaaaataaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="44752" stop="42068"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44452" g_stop="44438" g_length="15"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="15" r_length="15" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44437" i_stop="43037" i_length="1401">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43036" g_stop="42359" g_length="678"/>
          <reference_exon_boundary r_type="cDNA" r_start="16" r_stop="693" r_length="678" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E374785" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>693</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374785" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44452" e_stop="44438"/>
          <exon e_start="43036" e_stop="42359"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATTCCGGTCACAGGTATTATTAGTTGTAATTTTTTTTTTTACTCTCCAGTTTCATCAAGTTGCTTGTCTGGTTTACATGTAGCACAGAGTTTTTTTTATTAAAAATAGAAAAGACTTTTCAATTTTGTGGTATTTCTTAAACGATAAATAGGTAGAATATAACAAAATATCTTTTAATTTTACAGTTTTAAACATGTCACGTGAAAATTTGAAGTTAAAGAGTTGTTAAAAAAAAGAAGGGAAAATGCACAAGCACCCCTCAACCCGTTTTCGCATGGGCTCATCATCTGATGCAGAACCGATGCGAGAGGGAGAAGCGGGGATTGATAGCTTTCAAGAACCAGTGGAAAGGAAAGACTTCTTTCCCGAAATCTCAGAGACACACTTATACTATATTAAAGTCTTATTACCCCTGAACTTATTTTATAAGTAATTTTCTATCCATTTTCAGCCTACGTGGTTTCAACTTGAAAAAAAAAAGTCAATCAGCCTTTGGCCCAGAAGATAGTGCCATGAAAGTCGAAAAGGGATAGAAAATTATTAATAAAATAAGTTCAGGGGGAAATAGTACCTTAGTATAGTATAAGTGTGCCTCTGAGATTTCGAACATAGTTTGAGGGAGTACTTGTGCATTATCCCTTACAGAATAAAAGAATAAATAAGGCAAACAAATTTAAACGGAGAAAGTAACATAGTGTGCATACATATAATATATGGATGTACTACATATGATAAAGGTTTATTTATAATTAACTAGAGATGTTATGTTCTAGCCTTAGAGAACGAACTCTCATAATTTACAACATATAATACATATATTGGATCCTAAACTTGGCTCCAAATTTTAACTTTGACTTTCAACTTTCATAATGCACAAACAAACACTTTAACTATCCAACTTTTAAATAAATAAACACATGAGTCCTAAATGGCACAATACAAGTAGGATACCACGTAGGACAAAAAATGACATGTAGGACGACATGTAGGACATACGTGTCTATTTGTTCAACTTTATACAAGTTTAAGTGTTTATTTGTGCACATCTAAAGTTGAAGAACATAAATGTAATTTGAAATCAAGTTAAAGGGCATATTTATGTATTATGCCTTTACGATAATAAGGATTCATATCTCACACCAACTAACTTTGTTGATTGGGATTAAGGGTATAAGTTTTTCTTTTTTTTCATATGTATAGTGGCTTGTTTATATATCTCAAAGGAAAGTTTTTTTCACCTACACTCTCCAAATTAATATTATGTCGTGCGCGTATGTGTTGGATTCTCTAAAACTACTTTATTTTTGGAAAATCCAATACGTACATATCGTCATTTTAAAAAAATCTGAGCAACATAGATTTTTATACCTCGAAAACCTATTCCTAATTTTGTTTTATTGTTATTTTTAAATAGGTTCTTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTACAGCGACTATGAAGAAGTTTTGCCAAAAGGATTCTTGGAGAGAACAAAAGAAAGAGGAAAAATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTGTCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACTTGGCCACTCTATGCTGAACAACAAATGAATGCATTTTTATTAGTGAAAGAATTAGGACTTGGTGAAGAGATAAGATTGGACTATGCTGTTGATTTTGAAGGGAAAAATAATCAAGTTGATACAGTAAGTGCTCAAGAAATTGAAAGTGGTTTATTAAAGTTGATGGTAAAAAGTGAAGAAAATGAAGTGAGGAAAAAAATGAAGGAGAAGAGTAGAGTAGCTATGGAGGAAGGTGGATCATCTTATAACTCACTTGGACTTCTAATTAAGGATGTAATCACAAATATTTAATTTTCTTATAGTATATGAAGAAGCAAAACAAGAGAAGATATATGGTATTTGAGGAGATATGTAGTATTATGATTTATGGTCATTTTTAATATTTGTACACTTTCAATATTTATTCAATGCGTTCACTTCAAAAATAATTTTCATAC</genome_strand>
        <mrna_strand>GCATTCCGGTCACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTACAGCGACTATGAAGAAGTTTTGCCAAAAGGATTCTTGGAGAGAACAAAAGAAAGAGGAAAAATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTGTCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACTTGGCCACTCTATGCTGAACAACAAATGAATGCATTTTTATTAGTGAAAGAATTAGGACTTGGTGAAGAGATAAGATTGGACTATGCTGTTGATTTTGAAGGGAAAAATAATCAAGTTGATACAGTAAGTGCTCAAGAAATTGAAAGTGGTTTATTAAAGTTGATGGTAAAAAGTGAAGAAAATGAAGTGAGGAAAAAAATGAAGGAGAAGAGTAGAGTAGCTATGGAGGAAGGTGGATCATCTTATAACTCACTTGGACTTCTAATTAAGGATGTAATCACAAATATTTAATTTTCTTATAGTATATGAAGAAGCAAAACAAGAGAAGATATATGGTATTTGAGGAGATATGTAGTATTATGATTTATGGTCATTTTTAATATTTGTACACTTTCAATATTTATTCAATGCGTTCACTTCAAAAATAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E433892" ref_strand="-" ref_description="SGN-E433892 [STM-59-K23]">
      <seq>ttttgaaaaaagtggccattttagaaataattcattggagattgaaagtattattaagtggttagatgatcaacaggattcctctgtagtgtttttgtgttttggtagtatgggaagttttgaagcagaacagatcaaagaaatagcaattgcactggagcattgtggtcacaggttcctgtggtctttaagaaaatctccaccaaagggaaaagtagatataccaacaagttacaacaactatgaagaagttttgccaaaaggattcttggagagaacaaaagggtttggaaaaataataggatgggcaccacaagtaacaattttatctcatccatcaataggaggatttgtgtcccattgtggatggaattcaatactagaaagtgtacattttggtgtaccaattgcaacttggccactctatgcagaacaacaaatgaatgcatttttgttagtgaaagaattaggacttggtgaagagataaaattggactatgttgttgattttgaaggaaaaaataatcaagttgatatagtaagtgctcaagaaattgaaagtggtttattaaagttgatggtgaaaagtgaagagaatgaagtgaggaaaaaaatgaaggaaatgaaggagaagagtagagtagctatggagaatggtggatcatcttataactctcttggacttcttattaaggatgtaatcactaatatttaattttcttataatatgaagaagcaaaaagtagagaagatatggtatttgaggagatatgtagtattatgatttatggtcgataattaatatttgtagctttaaaaaaagatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="44911" stop="42108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44611" g_stop="44438" g_length="174"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="174" r_length="174" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44437" i_stop="43037" i_length="1401">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="0.956" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43036" g_stop="42391" g_length="646"/>
          <reference_exon_boundary r_type="cDNA" r_start="175" r_stop="826" r_length="652" r_score="0.909"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E433892" ref_strand="-">
        <total_alignment_score>0.920</total_alignment_score>
        <cumulative_length_of_scored_exons>820</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E433892" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="44611" e_stop="44438"/>
          <exon e_start="43036" e_stop="42391"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTGAAAAAAGTGGTCATTTTATAAATAATTCATTGGAGATTGAAAGTACTATTAAGTGGTTAGATGATCAACAGGATTCCTCTGTAGTGTTTTTGTGTTTTGGTAGTATGGGAAGTTTTGAAGCAGAACAGGTCAAAGAAATAGCAACTGCACTGGAGCATTCCGGTCACAGGTATTATTAGTTGTAATTTTTTTTTTTACTCTCCAGTTTCATCAAGTTGCTTGTCTGGTTTACATGTAGCACAGAGTTTTTTTTATTAAAAATAGAAAAGACTTTTCAATTTTGTGGTATTTCTTAAACGATAAATAGGTAGAATATAACAAAATATCTTTTAATTTTACAGTTTTAAACATGTCACGTGAAAATTTGAAGTTAAAGAGTTGTTAAAAAAAAGAAGGGAAAATGCACAAGCACCCCTCAACCCGTTTTCGCATGGGCTCATCATCTGATGCAGAACCGATGCGAGAGGGAGAAGCGGGGATTGATAGCTTTCAAGAACCAGTGGAAAGGAAAGACTTCTTTCCCGAAATCTCAGAGACACACTTATACTATATTAAAGTCTTATTACCCCTGAACTTATTTTATAAGTAATTTTCTATCCATTTTCAGCCTACGTGGTTTCAACTTGAAAAAAAAAAGTCAATCAGCCTTTGGCCCAGAAGATAGTGCCATGAAAGTCGAAAAGGGATAGAAAATTATTAATAAAATAAGTTCAGGGGGAAATAGTACCTTAGTATAGTATAAGTGTGCCTCTGAGATTTCGAACATAGTTTGAGGGAGTACTTGTGCATTATCCCTTACAGAATAAAAGAATAAATAAGGCAAACAAATTTAAACGGAGAAAGTAACATAGTGTGCATACATATAATATATGGATGTACTACATATGATAAAGGTTTATTTATAATTAACTAGAGATGTTATGTTCTAGCCTTAGAGAACGAACTCTCATAATTTACAACATATAATACATATATTGGATCCTAAACTTGGCTCCAAATTTTAACTTTGACTTTCAACTTTCATAATGCACAAACAAACACTTTAACTATCCAACTTTTAAATAAATAAACACATGAGTCCTAAATGGCACAATACAAGTAGGATACCACGTAGGACAAAAAATGACATGTAGGACGACATGTAGGACATACGTGTCTATTTGTTCAACTTTATACAAGTTTAAGTGTTTATTTGTGCACATCTAAAGTTGAAGAACATAAATGTAATTTGAAATCAAGTTAAAGGGCATATTTATGTATTATGCCTTTACGATAATAAGGATTCATATCTCACACCAACTAACTTTGTTGATTGGGATTAAGGGTATAAGTTTTTCTTTTTTTTCATATGTATAGTGGCTTGTTTATATATCTCAAAGGAAAGTTTTTTTCACCTACACTCTCCAAATTAATATTATGTCGTGCGCGTATGTGTTGGATTCTCTAAAACTACTTTATTTTTGGAAAATCCAATACGTACATATCGTCATTTTAAAAAAATCTGAGCAACATAGATTTTTATACCTCGAAAACCTATTCCTAATTTTGTTTTATTGTTATTTTTAAATAGGTTCTTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTACAGCGACTATGAAGAAGTTTTGCCAAAAGGATTCTTGGAGAGAACAAAAGAAAGAGGAAAAATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTGTCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACTTGGCCACTCTATGCTGAACAACAAATGAATGCATTTTTATTAGTGAAAGAATTAGGACTTGGTGAAGAGATAAGATTGGACTATGCTGTTGATTTTGAAGGGAAAAATAATCAAGTTGATACAGTAAGTGCTCAAGAAATTGAAAGTGGTTTATTAAAGTTGATGGTAAAAAGTGAAGAAAATGAAGTGAGG-----AA--AA--AAATGAAGGAGAAGAGTAGAGTAGCTATGGAGGAAGGTGGATCATCTTATAACTCACTTGGACTTCTAATTAAGGATGTAATCACAAATATTTAATTTTCTTATAGTATATGAAGAAGCAAAACAAGAGAAGATATATGGTATTTGAGGAGATATGTAGTATTATGATTTATGGTC-ATTTTTAATATTTGTACACTTTCAATATTTATT</genome_strand>
        <mrna_strand>TTTTGAAAAAAGTGGCCATTTTAGAAATAATTCATTGGAGATTGAAAGTATTATTAAGTGGTTAGATGATCAACAGGATTCCTCTGTAGTGTTTTTGTGTTTTGGTAGTATGGGAAGTTTTGAAGCAGAACAGATCAAAGAAATAGCAATTGCACTGGAGCATTGTGGTCACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCCTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTACAACAACTATGAAGAAGTTTTGCCAAAAGGATTCTTGGAGAGAACAAAAGGGTTTGGAAAAATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTGTCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACTTGGCCACTCTATGCAGAACAACAAATGAATGCATTTTTGTTAGTGAAAGAATTAGGACTTGGTGAAGAGATAAAATTGGACTATGTTGTTGATTTTGAAGGAAAAAATAATCAAGTTGATATAGTAAGTGCTCAAGAAATTGAAAGTGGTTTATTAAAGTTGATGGTGAAAAGTGAAGAGAATGAAGTGAGGAAAAAAATGAAGGAAATGAAGGAGAAGAGTAGAGTAGCTATGGAGAATGGTGGATCATCTTATAACTCTCTTGGACTTCTTATTAAGGATGTAATCACTAATATTTAATTTTCTTATA--ATATGAAGAAGCAAAA-AGTAGAGAAGATATGGTATTTGAGGAGATATGTAGTATTATGATTTATGGTCGATAATTAATATTTGTA-GCTTTAAAAAAAGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E213674" ref_strand="+" ref_description="SGN-E213674 [cLEC-76-D23]">
      <seq>aaaaagtggtcattttataaataattcattggagattgaaagtactattaagtggttagatgatcaacaggattcctctgtagtgtttttgtgttttggtagtatgggaagttttgaagcagaacaggtcaaagaaatagcaactgcactggagcattccggtcacaggttcttgtggtctttaagaaaatctccaccaaagggaaaagtagatataccaacaagttacagcgactatgaagaagttttgccaaaaggattcttggagagaacaaaagaaagaggaaaaataataggatgggcaccacaagtaacaattttatctcatccatcaataggaggatttgtgtcccattgtggatggaattcaatactagaaagtgtacattttggtgtaccaattgcaacttggccactctatgctgaacaacaaatgaatgcatttttattagtgaaagaattaggacttggtgaagagataagattggactatgctgttgattttgaagggaaaaataatcaagttgatacagtaagtgctcaagaaattgaaagtggtttattaaagttgatggtaaaaagtgaagaaaatgaagtgaggaaaaaaatgaaggagaagagtagagtagctatggagggaaggtggatcatcttataactcacttggacttctaatttaggatgtaatcacnaatatttaattttcttatagtatatgaagaagcaaaacag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="44905" stop="42175"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="44605" g_stop="44438" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="168" r_length="168" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="44437" i_stop="43037" i_length="1401">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="43036" g_stop="42474" g_length="563"/>
          <reference_exon_boundary r_type="cDNA" r_start="169" r_stop="732" r_length="564" r_score="0.991"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E213674" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>731</cumulative_length_of_scored_exons>
        <coverage percentage="0.999" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E213674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="44605" e_stop="44438"/>
          <exon e_start="43036" e_stop="42474"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAAGTGGTCATTTTATAAATAATTCATTGGAGATTGAAAGTACTATTAAGTGGTTAGATGATCAACAGGATTCCTCTGTAGTGTTTTTGTGTTTTGGTAGTATGGGAAGTTTTGAAGCAGAACAGGTCAAAGAAATAGCAACTGCACTGGAGCATTCCGGTCACAGGTATTATTAGTTGTAATTTTTTTTTTTACTCTCCAGTTTCATCAAGTTGCTTGTCTGGTTTACATGTAGCACAGAGTTTTTTTTATTAAAAATAGAAAAGACTTTTCAATTTTGTGGTATTTCTTAAACGATAAATAGGTAGAATATAACAAAATATCTTTTAATTTTACAGTTTTAAACATGTCACGTGAAAATTTGAAGTTAAAGAGTTGTTAAAAAAAAGAAGGGAAAATGCACAAGCACCCCTCAACCCGTTTTCGCATGGGCTCATCATCTGATGCAGAACCGATGCGAGAGGGAGAAGCGGGGATTGATAGCTTTCAAGAACCAGTGGAAAGGAAAGACTTCTTTCCCGAAATCTCAGAGACACACTTATACTATATTAAAGTCTTATTACCCCTGAACTTATTTTATAAGTAATTTTCTATCCATTTTCAGCCTACGTGGTTTCAACTTGAAAAAAAAAAGTCAATCAGCCTTTGGCCCAGAAGATAGTGCCATGAAAGTCGAAAAGGGATAGAAAATTATTAATAAAATAAGTTCAGGGGGAAATAGTACCTTAGTATAGTATAAGTGTGCCTCTGAGATTTCGAACATAGTTTGAGGGAGTACTTGTGCATTATCCCTTACAGAATAAAAGAATAAATAAGGCAAACAAATTTAAACGGAGAAAGTAACATAGTGTGCATACATATAATATATGGATGTACTACATATGATAAAGGTTTATTTATAATTAACTAGAGATGTTATGTTCTAGCCTTAGAGAACGAACTCTCATAATTTACAACATATAATACATATATTGGATCCTAAACTTGGCTCCAAATTTTAACTTTGACTTTCAACTTTCATAATGCACAAACAAACACTTTAACTATCCAACTTTTAAATAAATAAACACATGAGTCCTAAATGGCACAATACAAGTAGGATACCACGTAGGACAAAAAATGACATGTAGGACGACATGTAGGACATACGTGTCTATTTGTTCAACTTTATACAAGTTTAAGTGTTTATTTGTGCACATCTAAAGTTGAAGAACATAAATGTAATTTGAAATCAAGTTAAAGGGCATATTTATGTATTATGCCTTTACGATAATAAGGATTCATATCTCACACCAACTAACTTTGTTGATTGGGATTAAGGGTATAAGTTTTTCTTTTTTTTCATATGTATAGTGGCTTGTTTATATATCTCAAAGGAAAGTTTTTTTCACCTACACTCTCCAAATTAATATTATGTCGTGCGCGTATGTGTTGGATTCTCTAAAACTACTTTATTTTTGGAAAATCCAATACGTACATATCGTCATTTTAAAAAAATCTGAGCAACATAGATTTTTATACCTCGAAAACCTATTCCTAATTTTGTTTTATTGTTATTTTTAAATAGGTTCTTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTACAGCGACTATGAAGAAGTTTTGCCAAAAGGATTCTTGGAGAGAACAAAAGAAAGAGGAAAAATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTGTCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACTTGGCCACTCTATGCTGAACAACAAATGAATGCATTTTTATTAGTGAAAGAATTAGGACTTGGTGAAGAGATAAGATTGGACTATGCTGTTGATTTTGAAGGGAAAAATAATCAAGTTGATACAGTAAGTGCTCAAGAAATTGAAAGTGGTTTATTAAAGTTGATGGTAAAAAGTGAAGAAAATGAAGTGAGGAAAAAAATGAAGGAGAAGAGTAGAGTAGCTATGGA-GGAAGGTGGATCATCTTATAACTCACTTGGACTTCTAATTAAGGATGTAATCACAAATATTTAATTTTCTTATAGTATATGAAGAAGCAAAACAA</genome_strand>
        <mrna_strand>AAAAAGTGGTCATTTTATAAATAATTCATTGGAGATTGAAAGTACTATTAAGTGGTTAGATGATCAACAGGATTCCTCTGTAGTGTTTTTGTGTTTTGGTAGTATGGGAAGTTTTGAAGCAGAACAGGTCAAAGAAATAGCAACTGCACTGGAGCATTCCGGTCACAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTCTTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTACAGCGACTATGAAGAAGTTTTGCCAAAAGGATTCTTGGAGAGAACAAAAGAAAGAGGAAAAATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTGTCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACTTGGCCACTCTATGCTGAACAACAAATGAATGCATTTTTATTAGTGAAAGAATTAGGACTTGGTGAAGAGATAAGATTGGACTATGCTGTTGATTTTGAAGGGAAAAATAATCAAGTTGATACAGTAAGTGCTCAAGAAATTGAAAGTGGTTTATTAAAGTTGATGGTAAAAAGTGAAGAAAATGAAGTGAGGAAAAAAATGAAGGAGAAGAGTAGAGTAGCTATGGAGGGAAGGTGGATCATCTTATAACTCACTTGGACTTCTAATTTAGGATGTAATCACNAATATTTAATTTTCTTATAGTATATGAAGAAGCAAAACAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E433891" ref_strand="+" ref_description="SGN-E433891 [STM-59-K23]">
      <seq>agagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaattaattttcattcctttagcaggattaggccacattgtgtcagccattgaatttgcaaaacaaattctaaataaagatgaaaatttttccatctcttttctcatcatggaacttcccttagactatggtgttcaaaattttattcaatcactcacttctcaacctcgtttaaaattcatcgatatctccctagacgaaaaaacatcatctggattcctcaataaccacgaaacattcctctatgatttcatcgatggtcacaaatcactcgtacgtgaatatgttcacaacatttgtaaaacaggttcatgttatggttttattcttgacatgttttgtacctcgatgattgatatagctaacgaatttaatgtccctagttacatttactttgcttcaaacgcttcttttcttggcttatgtcttcatttcgagaccttaagaaatgaacaacattcagacacgtccaggtacatgaactctaacgaggcattatcaatcccaagttttaaaaatctttgtcctactaaagttttgcctaagcatttgttagattcaagacttgcctcaacgttgttttttgatggaattcgtcgatttaaagagactagagggattattgttaacacttttttcgagcttgaatcgttttctcttcaggctctttcagattctaagatggttccaaaaatttatccagttgggtcagtggttagttttgaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="77691" stop="44302"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46829" g_stop="46805" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="24" r_length="24" r_score="0.800"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46804" i_stop="46737" i_length="68">
            <donor d_prob="0.437" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.74"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46736" g_stop="46683" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="25" r_stop="76" r_length="52" r_score="0.741"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46682" i_stop="45330" i_length="1353">
            <donor d_prob="0.833" d_score="0.78"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45329" g_stop="44602" g_length="728"/>
          <reference_exon_boundary r_type="cDNA" r_start="77" r_stop="804" r_length="728" r_score="0.953"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E433891" ref_strand="+">
        <total_alignment_score>0.939</total_alignment_score>
        <cumulative_length_of_scored_exons>807</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E433891" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46829" e_stop="46805"/>
          <exon e_start="46736" e_stop="46683"/>
          <exon e_start="45329" e_stop="44602"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGATTGGGAGAGGGAGGAGAGAGGCAAGCGAGAGAGGGCAGAGAGGTGAATTGTATATAATTGTATATTATACATATATATTTGTATATAGGGCAAGCGAGATTGGGAGAGAGAGGAGAGCGAGAGAGGGCAAAGAGTGAGAGATGTGAACTGTATATGTATATAGGGTAAATAATTGTATATTATACATATGTGTATATTTGTATATTCTGGCGAATTATACATATACAAACAGGACTAGTTATACAAGTTTGAAGTCAAACCCACATAATTACTGTATAATGTTAGTCGTGAGTGATAATTACAGCAAAGTATAGCTATGATGAGTAATTAACTAATATAAATTTATTTTGTTAGCGTAATTTTTCCTATTCTAATTATAATTTATATAATTGGGGCATCCAATATTAATAGGTGTAAATCTAGTCAATTTTTCTATGGCTAAATAGTATTTTATAAAATTTCATGGAATTGTTATTTTCTCGATTGACTCATGACTAATTGTAATTGATTCGGAATTTTTTTGATACGCTAAGTTATTGACTATAAGGTAGCAATTGTCACTCTTAAAAGTGTAGTTTTATGACACAAAAACTCTTGTCATTTAATTATGTGAAGGAGAATTCATCTAATTAACATTTGAAAAACGTAATTTTAGGGTAAAAGTTACGCTAATTTACGCTAAGTTCATATATATTTCTTATCAATAGAAATTTAATTTGTAGGAAATTTTGACAAAAGGAAACTTCAAAAAGTACATTCATCTAGAATTTGGACAAGTCCTTTGTAAGAAAAGTAAAAAGAAAAATATTTGAACTTGTCAATTAATTATAGCTACAAAGACAACAGACTATTTTTTTAACACATTATTGATTACTTAACGTTTTCAACATAAAATCAAGCCAGAAACTATTTTCACCTATTATAGTCAGATCTCTCTATAATAATTATTCTCTAATCTCTATAATAACATTTAATTATTACAAAGGTCTACATGTTTTCTTTGTCAAAGATAACCTTAATACTTGTCTTTCCAGGTTTAAAGAACACATTGTCATTTAGTACACATCCTAATCAATAAATTTGTGCCAAAGTAAATTTACTTTACTCAAAAGTAAAACGTTCTTTATCAACTAAATATTTTTATTTTCAAAGCTTGAACTCTAAACCTCTCCCCTTAAAATTTCATATCTGATCAAACACAACGTGACATCGAAGTAAGTAACGTAAAAATCCTTTTATCTCCATTTCTTATTATCATTTGTAAATTGAATTCCTTTACTTTATAACCATTTTATGGTTCATAATGAGTTTCCTCTCACATTCATATCATACTAATGTTACTATCCAAAGACTTTTCTTACCTAAATATGAAGTTTGAAACTTCAAATTAGTAAAAAAAAAGATCACTTCTTCTATCATGATATATCTATATAAACTCTAAATACTTTACCCACAAATAAATTAACCAAAAAAAAAAACTCTGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGTTTTAAAAATCTTTGTCCTACTAAAGTTTTGCCTAAGCATTTGTTAGATTCAAGACTTGCTTCAACATTGTTTTTTGATGGAATTCGTCGATTTAAAGAGACTAAGGGGATTATTGTTAATACTTTTTTCGAGCTTGAATCGTTTTCTCTTCAGGCTCTTTTGGATTCTAAGATGGTTCCAAAAATTTATCCAGTTGGTCCAGTGGTTAGTTTTGAAAAA</genome_strand>
        <mrna_strand>AGAGAGAGAGAGAGAGA-GAGAGAG....................................................................AGAGAGAGAGAGAGAGAGAGAGA-GAGAGAGAGAGAGAG-AGAGAGAGAGAGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AATTAATTTTCATTCCTTTAGCAGGATTAGGCCACATTGTGTCAGCCATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCCTTAGACTATGGTGTTCAAAATTTTATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCTCCCTAGACGAAAAAACATCATCTGGATTCCTCAATAACCACGAAACATTCCTCTATGATTTCATCGATGGTCACAAATCACTCGTACGTGAATATGTTCACAACATTTGTAAAACAGGTTCATGTTATGGTTTTATTCTTGACATGTTTTGTACCTCGATGATTGATATAGCTAACGAATTTAATGTCCCTAGTTACATTTACTTTGCTTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTCGAGACCTTAAGAAATGAACAACATTCAGACACGTCCAGGTACATGAACTCTAACGAGGCATTATCAATCCCAAGTTTTAAAAATCTTTGTCCTACTAAAGTTTTGCCTAAGCATTTGTTAGATTCAAGACTTGCCTCAACGTTGTTTTTTGATGGAATTCGTCGATTTAAAGAGACTAGAGGGATTATTGTTAACACTTTTTTCGAGCTTGAATCGTTTTCTCTTCAGGCTCTTTCAGATTCTAAGATGGTTCCAAAAATTTATCCAGTTGGGTCAGTGGTTAGTTTTGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E374786" ref_strand="+" ref_description="SGN-E374786 [TUS-14-H4]">
      <seq>tgtcaacatgaaagaattaattttcattcctttagcaggattagggcacattgtatcagctattgaatttgcaaaacaaattctaaataaagatgaaaatttttccatctcttttctcatcatggaacttcctttagactatggtgtgaaaaatttcattcaatcactcacttctcaacctcgtttaaaattcatcgatatcaccctagacgaaaaaacatcatctcaattcctcaataaccatgaaacattcctctatgatttcatcgatggtcacaaaccacgcgtacgtgaatatgttcacaacatttgtaaaacaagtccatgttatggttttgttcttgacatgttttgtacatcgatgattgatatagctaacgaattcaatgtccctagttacatttacttcgcgtcaaacgcttcttttcttggcttatgtcttcattttgagactttaagaaatgaacaacattcagatacgtccagatacatgaactctaacgaggcattatcaatcccatgttttaaaaatctttgtcctactaaagttttgcctaagcatttgttagattcaagacttgcttcaacattgttttttgatggaattcgtcgatttaaagagactaaggggattattgttaatacttttttcgagcttgaatcgttttctcttcaggctctttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="45643" stop="44360"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45343" g_stop="44660" g_length="684"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="684" r_length="684" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E374786" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>684</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E374786" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45343" e_stop="44660"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGTTTTAAAAATCTTTGTCCTACTAAAGTTTTGCCTAAGCATTTGTTAGATTCAAGACTTGCTTCAACATTGTTTTTTGATGGAATTCGTCGATTTAAAGAGACTAAGGGGATTATTGTTAATACTTTTTTCGAGCTTGAATCGTTTTCTCTTCAGGCTCTTTT</genome_strand>
        <mrna_strand>TGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGTTTTAAAAATCTTTGTCCTACTAAAGTTTTGCCTAAGCATTTGTTAGATTCAAGACTTGCTTCAACATTGTTTTTTGATGGAATTCGTCGATTTAAAGAGACTAAGGGGATTATTGTTAATACTTTTTTCGAGCTTGAATCGTTTTCTCTTCAGGCTCTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E211480" ref_strand="+" ref_description="SGN-E211480 [cLEC-67-J9]">
      <seq>tgtcaacatgaaagaattaattttcattcctttagcaggattagggcacattgtatcagctattgaatttgcaaaacaaattctaaataaagatgaaaatttttccatctcttttctcatcatggaacttcctttagactatggtgtgaaaaatttcattcaatcactcacttctcaacctcgtttaaaattcatcgatatcaccctagacgaaaaaacatcatctcaattcctcaataaccatgaaacattcctctatgatttcatcgatggtcacaaaccacgcgtacgtgaatatgttcacaacatttgtaaaacaagtccatgttatggttttgttcttgacatgttttgtacatcgatgattgatatagctaacgaattcaatgtccctagttacatttacttcgcgtcaaacgcttcttttcttggcttatgtcttcattttgagactttaagaaatgaacaacattcagatacgtccagatacatgaactctaacgaggcattatcaatcccatggtttaaaaatctttgtcctactaaagttttgcctaagcatttggtagattcaagacttgcttcaacattggtttttgatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="45643" stop="44440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45343" g_stop="44740" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E211480" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E211480" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45343" e_stop="44740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGTTTTAAAAATCTTTGTCCTACTAAAGTTTTGCCTAAGCATTTGTTAGATTCAAGACTTGCTTCAACATTGTTTTTTGATGGA</genome_strand>
        <mrna_strand>TGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGGTTTAAAAATCTTTGTCCTACTAAAGTTTTGCCTAAGCATTTGGTAGATTCAAGACTTGCTTCAACATTGGTTTTTGATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202394" ref_strand="+" ref_description="SGN-E202394 [cLEC-6-L24]">
      <seq>tgtcaacatgaaagaattaattttcattcctttagcaggattagggcacattgtatcagctattgaatttgcaaaacaaattctaaataaagatgaaaatttttccatctcttttctcatcatggaacttcctttagactatggtgtgaaaaatttcattcaatcactcacttctcaacctcgtttaaaattcatcgatatcaccctagacgaaaaaacatcatctcaattcctcaataaccatgaaacattcctctatgatttcatcgatggtcacaaaccacgcgtacgtgaatatgttcacaacatttgtaaaacaagtccatgttatggttttgttcttgacatgttttgtacatcgatgattgatatagctaacgaattcaatgtccctagttacatttacttcgcgtcaaacgcttcttttcttggcttatgtcttcattttgagactttaagaaatgaacaacattcagatacgtccagatacatgaactctaacgaggcattatcaatcccatgttttaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="45643" stop="44514"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="45343" g_stop="44814" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E202394" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202394" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="45343" e_stop="44814"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGTTTTAAAA</genome_strand>
        <mrna_strand>TGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGTTTTAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404278" ref_strand="+" ref_description="SGN-E404278 [PPC-13-O11]">
      <seq>gagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagagaattaattttcattcctttagcaggattaggccacattgtgtcagccattgaatttgcaaaacaaattctaaataaagatgaaaatttttccatctcttttctcatcatggaacttcccttagactatggtgttcaaaattttattcaatcactcacttctcaacctcgtttaaaattcatcgatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="77696" stop="44843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="46830" g_stop="46805" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="0.808"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="46804" i_stop="46737" i_length="68">
            <donor d_prob="0.437" d_score="0.00"/>
            <acceptor a_prob="1.000" a_score="0.74"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="46736" g_stop="46683" g_length="54"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="77" r_length="52" r_score="0.741"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="46682" i_stop="45334" i_length="1349">
            <donor d_prob="0.833" d_score="0.78"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="45333" g_stop="45143" g_length="191"/>
          <reference_exon_boundary r_type="cDNA" r_start="78" r_stop="268" r_length="191" r_score="0.958"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E404278" ref_strand="+">
        <total_alignment_score>0.910</total_alignment_score>
        <cumulative_length_of_scored_exons>271</cumulative_length_of_scored_exons>
        <coverage percentage="1.011" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E404278" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="46830" e_stop="46805"/>
          <exon e_start="46736" e_stop="46683"/>
          <exon e_start="45333" e_stop="45143"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAGAGATTGGGAGAGGGAGGAGAGAGGCAAGCGAGAGAGGGCAGAGAGGTGAATTGTATATAATTGTATATTATACATATATATTTGTATATAGGGCAAGCGAGATTGGGAGAGAGAGGAGAGCGAGAGAGGGCAAAGAGTGAGAGATGTGAACTGTATATGTATATAGGGTAAATAATTGTATATTATACATATGTGTATATTTGTATATTCTGGCGAATTATACATATACAAACAGGACTAGTTATACAAGTTTGAAGTCAAACCCACATAATTACTGTATAATGTTAGTCGTGAGTGATAATTACAGCAAAGTATAGCTATGATGAGTAATTAACTAATATAAATTTATTTTGTTAGCGTAATTTTTCCTATTCTAATTATAATTTATATAATTGGGGCATCCAATATTAATAGGTGTAAATCTAGTCAATTTTTCTATGGCTAAATAGTATTTTATAAAATTTCATGGAATTGTTATTTTCTCGATTGACTCATGACTAATTGTAATTGATTCGGAATTTTTTTGATACGCTAAGTTATTGACTATAAGGTAGCAATTGTCACTCTTAAAAGTGTAGTTTTATGACACAAAAACTCTTGTCATTTAATTATGTGAAGGAGAATTCATCTAATTAACATTTGAAAAACGTAATTTTAGGGTAAAAGTTACGCTAATTTACGCTAAGTTCATATATATTTCTTATCAATAGAAATTTAATTTGTAGGAAATTTTGACAAAAGGAAACTTCAAAAAGTACATTCATCTAGAATTTGGACAAGTCCTTTGTAAGAAAAGTAAAAAGAAAAATATTTGAACTTGTCAATTAATTATAGCTACAAAGACAACAGACTATTTTTTTAACACATTATTGATTACTTAACGTTTTCAACATAAAATCAAGCCAGAAACTATTTTCACCTATTATAGTCAGATCTCTCTATAATAATTATTCTCTAATCTCTATAATAACATTTAATTATTACAAAGGTCTACATGTTTTCTTTGTCAAAGATAACCTTAATACTTGTCTTTCCAGGTTTAAAGAACACATTGTCATTTAGTACACATCCTAATCAATAAATTTGTGCCAAAGTAAATTTACTTTACTCAAAAGTAAAACGTTCTTTATCAACTAAATATTTTTATTTTCAAAGCTTGAACTCTAAACCTCTCCCCTTAAAATTTCATATCTGATCAAACACAACGTGACATCGAAGTAAGTAACGTAAAAATCCTTTTATCTCCATTTCTTATTATCATTTGTAAATTGAATTCCTTTACTTTATAACCATTTTATGGTTCATAATGAGTTTCCTCTCACATTCATATCATACTAATGTTACTATCCAAAGACTTTTCTTACCTAAATATGAAGTTTGAAACTTCAAATTAGTAAAAAAAAAGATCACTTCTTCTATCATGATATATCTATATAAACTCTAAATACTTTACCCACAAATAAATTAACCAAAAAAAAAAACTCTGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATAT</genome_strand>
        <mrna_strand>GAGAGAGAGAGAGAGAGA-GAGAGAG....................................................................AGAGAGAGAGAGAGAGAGAGAGA-GAGAGAGAGAGAGAG-AGAGAGAGAGAGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGAGAATTAATTTTCATTCCTTTAGCAGGATTAGGCCACATTGTGTCAGCCATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCCTTAGACTATGGTGTTCAAAATTTTATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390527" ref_strand="+" ref_description="SGN-E390527 [TUS-40-F11]">
      <seq>ccaacatgtattttacattaactaactagatttaaaacaaatatcggacacatattaaaaaattaatttgaaaaaatgatttttcaatttcagttttcattttaaaagtgaaattccatttttaccctttttcacctactatttaattttcattttcttttagaattttctagttatggtgttttccttcttccttccttctttttagtataacaagattaatggagtcaacaatttacagacgaaacatctgctcaaaaaaccaaccagaaaggctcaagctacgacgtttttgagctgatggatgaagaattcgagaggaagaggattgaagttaaaggctatggaagctttgggctgtgggtttgattttgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="49554" stop="50674"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49854" g_stop="50106" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50107" i_stop="50253" i_length="147">
            <donor d_prob="0.240" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50254" g_stop="50376" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="377" r_length="124" r_score="0.967"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E390527" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>376</cumulative_length_of_scored_exons>
        <coverage percentage="0.997" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E390527" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49854" e_stop="50106"/>
          <exon e_start="50254" e_stop="50376"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CCAACATGTATTTTACATTAACTAACTAGATTTAAAACAAATATCGGACACATATTAAAAAATTAATTTGAAAAAATGATTTTTCAATTTCAGTTTTCATTTTAAAAGTGAAATTCCATTTTTACCCTTTTTCACCTACTATTTAATTTTCATTTTCTTTTAGAATTTTCTAGTTATGGTGTTTTCCTTCTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTGGTCAAAAGTCAAACCTTTTCTCTTTCACTTTCCTTCTCCCGTCATCTACTTCTGACCAAAACCCCTCTACCTATCCCCAAACCTTATACCCCTCATTTTCTCAAATGGGTATTTCTTAAAATTTCCATTTTTTGTACTTTTTTTCAGCTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTT-AAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTA</genome_strand>
        <mrna_strand>CCAACATGTATTTTACATTAACTAACTAGATTTAAAACAAATATCGGACACATATTAAAAAATTAATTTGAAAAAATGATTTTTCAATTTCAGTTTTCATTTTAAAAGTGAAATTCCATTTTTACCCTTTTTCACCTACTATTTAATTTTCATTTTCTTTTAGAATTTTCTAGTTATGGTGTTTTCCTTCTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTG...................................................................................................................................................CTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E326008" ref_strand="+" ref_description="SGN-E326008 [cTOD-1-C7]">
      <seq>caacatgtattttacattaactaactagatttaaaacaaatatcggacacatattaaaaaattaatttgaaaaaatgatttttcaatttcagttttcattttaaaagtgaaattccatttttaccctttttcacctactatttaattttcattttcttttagaattttctagttatggtgttttccttcttccttccttctttttagtataacaagattaatggagtcaacaatttacagacgaaacatctgctcaaaaaaccaaccagaaaggctcaagctacgacgtttttgagctgatggatgaagaattcgagaggaagaggattgaagttaaggctatggaagctttgggctgtgggtttgattttgctagcgatttcaggttgaagttcgtaaaaagatgtccaaacgggggtagattggtaattttggatgagagtaatagacggaacgtcgtcatccccggcggcgttacaattcccgatgtatctgaaaatatccgatgtgataaangggaccacattcgtttcaagtctgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="49555" stop="50844"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49855" g_stop="50106" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50107" i_stop="50253" i_length="147">
            <donor d_prob="0.240" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50254" g_stop="50544" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="543" r_length="291" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E326008" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>543</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E326008" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49855" e_stop="50106"/>
          <exon e_start="50254" e_stop="50544"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACATGTATTTTACATTAACTAACTAGATTTAAAACAAATATCGGACACATATTAAAAAATTAATTTGAAAAAATGATTTTTCAATTTCAGTTTTCATTTTAAAAGTGAAATTCCATTTTTACCCTTTTTCACCTACTATTTAATTTTCATTTTCTTTTAGAATTTTCTAGTTATGGTGTTTTCCTTCTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTGGTCAAAAGTCAAACCTTTTCTCTTTCACTTTCCTTCTCCCGTCATCTACTTCTGACCAAAACCCCTCTACCTATCCCCAAACCTTATACCCCTCATTTTCTCAAATGGGTATTTCTTAAAATTTCCATTTTTTGTACTTTTTTTCAGCTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAGAGTAATAGACGGAACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATG</genome_strand>
        <mrna_strand>CAACATGTATTTTACATTAACTAACTAGATTTAAAACAAATATCGGACACATATTAAAAAATTAATTTGAAAAAATGATTTTTCAATTTCAGTTTTCATTTTAAAAGTGAAATTCCATTTTTACCCTTTTTCACCTACTATTTAATTTTCATTTTCTTTTAGAATTTTCTAGTTATGGTGTTTTCCTTCTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTG...................................................................................................................................................CTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAGAGTAATAGACGGAACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAANGGGACCACATTCGTTTCAAGTCTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E325989" ref_strand="+" ref_description="SGN-E325989 [cTOD-1-A23]">
      <seq>caacatgtattttacattaactaactagatctaaaacaaatatcggacacatgttaaaaaattaatttgaaaaaatgatttttcaatttcagttttcattttaaaagtgaaattccatttttaccctttttcacctactatgtaattttcattttcttttagaattttctagttatggtgttttccttcttccttccttctttttagtataacaagattaatggagtcaacaatttacagactaaacatctgctcaaaaaaccaaccagaaaggctcaagctacgacgtttttgagctgatggatgaagaattcgagaggaagacgattgaagttaaggctatggaagctttgggctgtgggtttgattttgctagcgattacaggttgaagttcgtaaaaagatgtccaaaccggggtcgattggtaattttggatgagaataatagac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="49555" stop="50751"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49855" g_stop="50106" g_length="252"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="252" r_length="252" r_score="0.984"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50107" i_stop="50253" i_length="147">
            <donor d_prob="0.240" d_score="0.98"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="50254" g_stop="50451" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="253" r_stop="450" r_length="198" r_score="0.975"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E325989" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>450</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E325989" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49855" e_stop="50106"/>
          <exon e_start="50254" e_stop="50451"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACATGTATTTTACATTAACTAACTAGATTTAAAACAAATATCGGACACATATTAAAAAATTAATTTGAAAAAATGATTTTTCAATTTCAGTTTTCATTTTAAAAGTGAAATTCCATTTTTACCCTTTTTCACCTACTATTTAATTTTCATTTTCTTTTAGAATTTTCTAGTTATGGTGTTTTCCTTCTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTGGTCAAAAGTCAAACCTTTTCTCTTTCACTTTCCTTCTCCCGTCATCTACTTCTGACCAAAACCCCTCTACCTATCCCCAAACCTTATACCCCTCATTTTCTCAAATGGGTATTTCTTAAAATTTCCATTTTTTGTACTTTTTTTCAGCTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAGAGTAATAGAC</genome_strand>
        <mrna_strand>CAACATGTATTTTACATTAACTAACTAGATCTAAAACAAATATCGGACACATGTTAAAAAATTAATTTGAAAAAATGATTTTTCAATTTCAGTTTTCATTTTAAAAGTGAAATTCCATTTTTACCCTTTTTCACCTACTATGTAATTTTCATTTTCTTTTAGAATTTTCTAGTTATGGTGTTTTCCTTCTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACTAAACATCTG...................................................................................................................................................CTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGACGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTACAGGTTGAAGTTCGTAAAAAGATGTCCAAACCGGGGTCGATTGGTAATTTTGGATGAGAATAATAGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E705754" ref_strand="+" ref_description="SGN-E705754 [FA28AB11]">
      <seq>cttccttccttctttttagtataacaagattaatggagtcaacaatttacagacgaaacatctggtcaaaagtcaaaccttttctctttcactttccttctcccgtcatctacttctgaccaaaacccctctacctatccccaaaccttatacccctcattttctcaaatgggtatttcttaaaatttccattttttgtactttttttcagctcaaaaaaccaaccagaaaggctcaagctacgacgtttttgagctgatggatgaagaattcgagaggaagaggattgaagttaaggctatggaagctttgggctgtgggtttgattttgctagcgatttcaggttgaagttcgtaaaaagatgtccaaacgggggtagattggtaattttggatgagagtaatagacggaacgtcgtcatccccggcggcgttacaattcccgatgtatctgaaaatatccgatgtgataaaggggaccacattcgtttcaagtctgatgttctcgaatttaatcagatgtcagaattgctaaatcaaaaatcatcaatacatggaaaggttccatcaggctatctaaatgccatttttgatttaagtggagcctggttgaatgattcagcagatgctaagtacctcgcgtttgatggttattttgtctcgttatactatttgcacctgacagcatccccattagtactccatgaccaagtgaagaaagctgttccaccgcattgggatccagcatccttatccagatttattcaggcttatgggacacacataattgtgggtatgggtgttggaggccaggacctactttgtgttaagcagaaaccatcttcaacagttcctcctgctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="49743" stop="52560"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50043" g_stop="50561" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="519" r_length="519" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50562" i_stop="51361" i_length="800">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51362" g_stop="51600" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="520" r_stop="758" r_length="239" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51601" i_stop="52156" i_length="556">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52157" g_stop="52260" g_length="104"/>
          <reference_exon_boundary r_type="cDNA" r_start="759" r_stop="862" r_length="104" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E705754" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>862</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E705754" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50043" e_stop="50561"/>
          <exon e_start="51362" e_stop="51600"/>
          <exon e_start="52157" e_stop="52260"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTGGTCAAAAGTCAAACCTTTTCTCTTTCACTTTCCTTCTCCCGTCATCTACTTCTGACCAAAACCCCTCTACCTATCCCCAAACCTTATACCCCTCATTTTCTCAAATGGGTATTTCTTAAAATTTCCATTTTTTGTACTTTTTTTCAGCTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAGAGTAATAGACGGAACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATGTTCTCGAATTTAATCAGGTTTCCATTTTTAATCTCCCTTTTAATGATTCTTTGCTTGGTTTAATTTTTTTTATTGTTTGATTATATGCATAATTTTAGATTCATGAAGTTGGTATGTGAATGAATTTTGTAGTTTTAACTGAATTTTTAGTTAAAGATCAAATTTTTAGATGATGTTCTAAAGTTTAGTGTTTGTATTTGATAAAGTTCAAATTTTTAGACAAGTTCTATGAATTTTGTTCTAGTTAATTAAGATGAAATTAACCACTCATAAAGTTGACTTAGAGAGCGTGTAAAAGACGAGAAGTGGCATTAGGTGTTCTTTTAAATCTGTTTTCAAGTCTTGGTGGTAAGAGTTACGTGGCATAGGAGGAAGGTACTATAAGGATTTAGTTGAGGTATGCTGAAGCTGGCTTAGGACAACTCGATTGTCAAAAACAAATAGTAGTAGAAGTTGTTCTAATGACCATTGTGAATTGATTGTTATAAAAAGCATAGTATAATCAATTCCAACTTGTTTGGGATTGAGGTGCCGGTATTGTTGTAACTACATAACTCTTTTTGGGTGTAATTTCTATTTGATGGCCAATACAAATTAGGGAAGTTGTTACATCTTACTGATTAGTTTTGTCAAGGTTTTAGAATGATTACTCCTCTCATTCTATTTTATATGATGAACTTTCTCGGTTGGTCTATTTTTTTTTTGAAAAAGATATCTTTTTATATATTATTGACAAAGTGATCTTTAGAGTTGTATTTTTGTCGAGCGTGTTATTGGCTGTCTCATTAGCTCCAAATTTTCCCTAAATTCATTGCAGATGTCAGAATTGCTAAATCAAAAATCATCAATACATGGAAAGGTTCCATCAGGCTATCTAAATGCCATTTTTGATTTAAGTGGAGCCTGGTTGAATGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCTGTTCCACCGCATTGGGATCCAGCATCCTTATCCAGGTAGCTTCTCCATTCCACTCTGTACTCTCTTTGCTTAATCGGATGACTAGCTGTTTGTTAGTTCTAACTGGCTAAGCACAATTTCTTAAAATATCATCGCAATGCCTTTGAGGAGACTGTTAACTGATGCATTTGTGGATCCCTTTTAGTTTTTGGATTAAGTACTGGTGCGTTCAAGGATAGCCAACCCCAACTTTCTTGAAGCATAAGTGTAATTGTTGTTGTACTGATTAATTTAAGGATCTTCAGTTCGTCATTCAAAATCTGCAAAACTCCATGATTAACTTGTCTCAGAGTAGGTAACTACAACATACCTAGTGTAATCCCACAACATCAGGGTCCATTGGAAACAACCTCTCTACCTCTACGAGGTAGGGGTAAAGTCCGCGCACACTCTCTACCCTCCCCAGGCCCCACCCTACTTGTGGGATTACACGGGGTATGTTGTTGTTGGTGAATGAGTTTATGCGACTGTATGGTAGTGTTTGGAGATGCATTTGTGTTTTCGTATGGTTGTCTTATTTCTTATGACTTCTAATCTGACAATCCTAAGCAGATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACAGTTCCTCCTGCTG</genome_strand>
        <mrna_strand>CTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTGGTCAAAAGTCAAACCTTTTCTCTTTCACTTTCCTTCTCCCGTCATCTACTTCTGACCAAAACCCCTCTACCTATCCCCAAACCTTATACCCCTCATTTTCTCAAATGGGTATTTCTTAAAATTTCCATTTTTTGTACTTTTTTTCAGCTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAGAGTAATAGACGGAACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATGTTCTCGAATTTAATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGAATTGCTAAATCAAAAATCATCAATACATGGAAAGGTTCCATCAGGCTATCTAAATGCCATTTTTGATTTAAGTGGAGCCTGGTTGAATGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCTGTTCCACCGCATTGGGATCCAGCATCCTTATCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACAGTTCCTCCTGCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E602938" ref_strand="+" ref_description="SGN-E602938 [56014]">
      <seq>tctggtcaaaagtcaaaccttttctctttccctttccttctcccgtcatctacttctgaccaaaacccccctacctacccctaaccttataccccattttctctaatgagtatntcttaatttccattttttgtactttttcagctcaaaaaaccaaccagaaagactaaaactacgtcgttttttagctgatgggtgaagaattcgagaggaagaggattgaagttaaggctatggaagctttgggttgtgggtttgattttgctagcgatttcaggttgaagttcgtaaaaagatgtccaaacgggggtagattggtaattttggatgaaagtaatagacggaacgtcgtcatccccggcggcgttacaattcccgatgtatctgaaaatatccgatgtgataaaggggaccacattcgtttcaagtctgatgttctcgaatttaatcagatgtcagcattgctaaatcaaaaatcatcaatacatggaaaggttccatcaggctatctaaatgccatttttgatttaagtggagcctggttaaatgattcagcagatgctaaatacctcgcgtttgatggctattttgtctcgttgtactatttgcacctgacagcatccccattagtactccatgaccaagtgaagaaagctgttccaccgcattgggatccagcatccttatccagatttattcaggcttatgggacacacataattgtgggtatgggtgttggaggccaggacctactttgtgttaagcagaaaccatcttcaaccgttcctcctgctgaactaaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="49803" stop="52569"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50103" g_stop="50561" g_length="459"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="452" r_length="452" r_score="0.954"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50562" i_stop="51361" i_length="800">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51362" g_stop="51600" g_length="239"/>
          <reference_exon_boundary r_type="cDNA" r_start="453" r_stop="691" r_length="239" r_score="0.979"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="51601" i_stop="52156" i_length="556">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52157" g_stop="52269" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="692" r_stop="804" r_length="113" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E602938" ref_strand="+">
        <total_alignment_score>0.965</total_alignment_score>
        <cumulative_length_of_scored_exons>811</cumulative_length_of_scored_exons>
        <coverage percentage="1.009" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E602938" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50103" e_stop="50561"/>
          <exon e_start="51362" e_stop="51600"/>
          <exon e_start="52157" e_stop="52269"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGGTCAAAAGTCAAACCTTTTCTCTTTCACTTTCCTTCTCCCGTCATCTACTTCTGACCAAAACCCCTCTACCTATCCCCAAACCTTATACCCCTCATTTTCTCAAATGGGTATTTCTTAAAATTTCCATTTTTTGTACTTTTTTTCAGCTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAGAGTAATAGACGGAACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATGTTCTCGAATTTAATCAGGTTTCCATTTTTAATCTCCCTTTTAATGATTCTTTGCTTGGTTTAATTTTTTTTATTGTTTGATTATATGCATAATTTTAGATTCATGAAGTTGGTATGTGAATGAATTTTGTAGTTTTAACTGAATTTTTAGTTAAAGATCAAATTTTTAGATGATGTTCTAAAGTTTAGTGTTTGTATTTGATAAAGTTCAAATTTTTAGACAAGTTCTATGAATTTTGTTCTAGTTAATTAAGATGAAATTAACCACTCATAAAGTTGACTTAGAGAGCGTGTAAAAGACGAGAAGTGGCATTAGGTGTTCTTTTAAATCTGTTTTCAAGTCTTGGTGGTAAGAGTTACGTGGCATAGGAGGAAGGTACTATAAGGATTTAGTTGAGGTATGCTGAAGCTGGCTTAGGACAACTCGATTGTCAAAAACAAATAGTAGTAGAAGTTGTTCTAATGACCATTGTGAATTGATTGTTATAAAAAGCATAGTATAATCAATTCCAACTTGTTTGGGATTGAGGTGCCGGTATTGTTGTAACTACATAACTCTTTTTGGGTGTAATTTCTATTTGATGGCCAATACAAATTAGGGAAGTTGTTACATCTTACTGATTAGTTTTGTCAAGGTTTTAGAATGATTACTCCTCTCATTCTATTTTATATGATGAACTTTCTCGGTTGGTCTATTTTTTTTTTGAAAAAGATATCTTTTTATATATTATTGACAAAGTGATCTTTAGAGTTGTATTTTTGTCGAGCGTGTTATTGGCTGTCTCATTAGCTCCAAATTTTCCCTAAATTCATTGCAGATGTCAGAATTGCTAAATCAAAAATCATCAATACATGGAAAGGTTCCATCAGGCTATCTAAATGCCATTTTTGATTTAAGTGGAGCCTGGTTGAATGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCTGTTCCACCGCATTGGGATCCAGCATCCTTATCCAGGTAGCTTCTCCATTCCACTCTGTACTCTCTTTGCTTAATCGGATGACTAGCTGTTTGTTAGTTCTAACTGGCTAAGCACAATTTCTTAAAATATCATCGCAATGCCTTTGAGGAGACTGTTAACTGATGCATTTGTGGATCCCTTTTAGTTTTTGGATTAAGTACTGGTGCGTTCAAGGATAGCCAACCCCAACTTTCTTGAAGCATAAGTGTAATTGTTGTTGTACTGATTAATTTAAGGATCTTCAGTTCGTCATTCAAAATCTGCAAAACTCCATGATTAACTTGTCTCAGAGTAGGTAACTACAACATACCTAGTGTAATCCCACAACATCAGGGTCCATTGGAAACAACCTCTCTACCTCTACGAGGTAGGGGTAAAGTCCGCGCACACTCTCTACCCTCCCCAGGCCCCACCCTACTTGTGGGATTACACGGGGTATGTTGTTGTTGGTGAATGAGTTTATGCGACTGTATGGTAGTGTTTGGAGATGCATTTGTGTTTTCGTATGGTTGTCTTATTTCTTATGACTTCTAATCTGACAATCCTAAGCAGATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACAGTTCCTCCTGCTGAGCTAAAAG</genome_strand>
        <mrna_strand>TCTGGTCAAAAGTCAAACCTTTTCTCTTTCCCTTTCCTTCTCCCGTCATCTACTTCTGACCAAAACCCCCCTACCTA-CCCCTAACCTTATA-CCC-CATTTTCTCTAATGAGTATNTCTT--AATTTCCATTTTTTGTAC--TTTTTCAGCTCAAAAAACCAACCAGAAAGACTAAAACTACGTCGTTTTTTAGCTGATGGGTGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGTTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAAAGTAATAGACGGAACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATGTTCTCGAATTTAATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGCATTGCTAAATCAAAAATCATCAATACATGGAAAGGTTCCATCAGGCTATCTAAATGCCATTTTTGATTTAAGTGGAGCCTGGTTAAATGATTCAGCAGATGCTAAATACCTCGCGTTTGATGGCTATTTTGTCTCGTTGTACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCTGTTCCACCGCATTGGGATCCAGCATCCTTATCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACCGTTCCTCCTGCTGAACTAAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E212650" ref_strand="+" ref_description="SGN-E212650 [cLEC-73-I5]">
      <seq>aacgtcgtcatccccggcggcgttacaattcccgatgtatctgaaaatatccgatgtgataaaggggaccacattcgtttcaagtctgatgttctcgaatttaatcagatgtcagaattgctaaatcaaaaatcatcaatacatggaaaggttccatcaggctatctaaatgccatttttgatttaagtggagcctggttgaatgattcagcagatgctaagtacctcgcgtttgatggttattttgtctcgttatactatttgcacctgacagcatccccattagtactccatgaccaagtgaagaaagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="50154" stop="51865"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="50454" g_stop="50561" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="108" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="50562" i_stop="51361" i_length="800">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.957" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="51362" g_stop="51565" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="109" r_stop="312" r_length="204" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E212650" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>312</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E212650" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="50454" e_stop="50561"/>
          <exon e_start="51362" e_stop="51565"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATGTTCTCGAATTTAATCAGGTTTCCATTTTTAATCTCCCTTTTAATGATTCTTTGCTTGGTTTAATTTTTTTTATTGTTTGATTATATGCATAATTTTAGATTCATGAAGTTGGTATGTGAATGAATTTTGTAGTTTTAACTGAATTTTTAGTTAAAGATCAAATTTTTAGATGATGTTCTAAAGTTTAGTGTTTGTATTTGATAAAGTTCAAATTTTTAGACAAGTTCTATGAATTTTGTTCTAGTTAATTAAGATGAAATTAACCACTCATAAAGTTGACTTAGAGAGCGTGTAAAAGACGAGAAGTGGCATTAGGTGTTCTTTTAAATCTGTTTTCAAGTCTTGGTGGTAAGAGTTACGTGGCATAGGAGGAAGGTACTATAAGGATTTAGTTGAGGTATGCTGAAGCTGGCTTAGGACAACTCGATTGTCAAAAACAAATAGTAGTAGAAGTTGTTCTAATGACCATTGTGAATTGATTGTTATAAAAAGCATAGTATAATCAATTCCAACTTGTTTGGGATTGAGGTGCCGGTATTGTTGTAACTACATAACTCTTTTTGGGTGTAATTTCTATTTGATGGCCAATACAAATTAGGGAAGTTGTTACATCTTACTGATTAGTTTTGTCAAGGTTTTAGAATGATTACTCCTCTCATTCTATTTTATATGATGAACTTTCTCGGTTGGTCTATTTTTTTTTTGAAAAAGATATCTTTTTATATATTATTGACAAAGTGATCTTTAGAGTTGTATTTTTGTCGAGCGTGTTATTGGCTGTCTCATTAGCTCCAAATTTTCCCTAAATTCATTGCAGATGTCAGAATTGCTAAATCAAAAATCATCAATACATGGAAAGGTTCCATCAGGCTATCTAAATGCCATTTTTGATTTAAGTGGAGCCTGGTTGAATGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCT</genome_strand>
        <mrna_strand>AACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATGTTCTCGAATTTAATCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATGTCAGAATTGCTAAATCAAAAATCATCAATACATGGAAAGGTTCCATCAGGCTATCTAAATGCCATTTTTGATTTAAGTGGAGCCTGGTTGAATGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704796" ref_strand="+" ref_description="SGN-E704796 [FA25BB09]">
      <seq>cgattcagcagatgctaagtacctcgcgtttgatggttattttgtctcgttatactatttgcacctgacagcatccccattagtactccatgaccaagtgaagaaagctgttccaccgcattgggatccagcatccttatccagatttattcaggcttatgggacacacataattgtgggtatgggtgttggaggccaggacctactttgtgttaagcagaaaccatcttcaacagttcctcctgctgagctaaaagcacacttggatgacctcggagattgtctcttttctgatgaagcaagccctctgcctgagtggaaggcaaaagagggtaaaaagaaggtccccgaggtattcaatcgcatgttgcagtcgcataccatgcaatttactagcataacagagacatcaagcaaggatggtctcactataatttggtcaaaaagaggtggtgatgtgtttgcacaaagccactcgaagtggcttcagactgtggctgcttaccctgatggcatactcttcaaacttgtaccgattacttcgctcttaacaggaataccaggaagcggttatctcagccatgcaataaatttatatctacgctataagcctgctctagaggatttacagtgtttcctcgagtttcaagttcctagccagtgggcgccattgttctgcgagctgcctcttagccatcaaagaaaagtggcatcttgccctgcattgcagttctgtttattcggcccaaagctttgtgtgagacctacccaggttacaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="51158" stop="54214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="51457" g_stop="51600" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="0.993"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="51601" i_stop="52156" i_length="556">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.876" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52157" g_stop="52355" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="343" r_length="199" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52356" i_stop="52550" i_length="195">
            <donor d_prob="0.848" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52551" g_stop="52628" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="344" r_stop="421" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="52629" i_stop="52710" i_length="82">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.081" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="52711" g_stop="52894" g_length="184"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="605" r_length="184" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="52895" i_stop="53743" i_length="849">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.690" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="53744" g_stop="53910" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="606" r_stop="772" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="53911" i_stop="54085" i_length="175">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="54086" g_stop="54094" g_length="9"/>
          <reference_exon_boundary r_type="cDNA" r_start="773" r_stop="781" r_length="9" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E704796" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>781</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E704796" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="51457" e_stop="51600"/>
          <exon e_start="52157" e_stop="52355"/>
          <exon e_start="52551" e_stop="52628"/>
          <exon e_start="52711" e_stop="52894"/>
          <exon e_start="53744" e_stop="53910"/>
          <exon e_start="54086" e_stop="54094"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCTGTTCCACCGCATTGGGATCCAGCATCCTTATCCAGGTAGCTTCTCCATTCCACTCTGTACTCTCTTTGCTTAATCGGATGACTAGCTGTTTGTTAGTTCTAACTGGCTAAGCACAATTTCTTAAAATATCATCGCAATGCCTTTGAGGAGACTGTTAACTGATGCATTTGTGGATCCCTTTTAGTTTTTGGATTAAGTACTGGTGCGTTCAAGGATAGCCAACCCCAACTTTCTTGAAGCATAAGTGTAATTGTTGTTGTACTGATTAATTTAAGGATCTTCAGTTCGTCATTCAAAATCTGCAAAACTCCATGATTAACTTGTCTCAGAGTAGGTAACTACAACATACCTAGTGTAATCCCACAACATCAGGGTCCATTGGAAACAACCTCTCTACCTCTACGAGGTAGGGGTAAAGTCCGCGCACACTCTCTACCCTCCCCAGGCCCCACCCTACTTGTGGGATTACACGGGGTATGTTGTTGTTGGTGAATGAGTTTATGCGACTGTATGGTAGTGTTTGGAGATGCATTTGTGTTTTCGTATGGTTGTCTTATTTCTTATGACTTCTAATCTGACAATCCTAAGCAGATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACAGTTCCTCCTGCTGAGCTAAAAGCACACTTGGATGACCTCGGAGATTGTCTCTTTTCTGATGAAGCAAGCCCTCTGCCTGAGTGGAAGGCAAAAGAGGGTAAAAAGAAGGTATTTTACACTCTCTAAGCAATGAAGATGCCTCAGTCCCAAACAAGCTGGGGGTGTCTATAATATATGAACCCTTGCTATTCCATTTTACATTCAGTTAAATAGGCACTTGATTTATGTTTGGGTATGTTCTGATATTTATGCACATAACTGGGGTCAATCATATCTGAATGGATTCTTATTTTAAATCTATAGGTCCCCGAGGTATTCAATCGCATGTTGCAGTCGCATACCATGCAATTTACTAGCATAACAGAGACATCAAGCAAGGATGTAAGTCACTCTCTGATTTTTTGTGTTCTGAAATGGAAGAAGTGGTAGACATGGTTAGTTATTAACGAATAATGTGGAGCAGGGTCTCACTATAATTTGGTCAAAAAGAGGTGGTGATGTGTTTGCACAAAGCCACTCGAAGTGGCTTCAGACTGTGGCTGCTTACCCTGATGGCATACTCTTCAAACTTGTACCGATTACTTCGCTCTTAACAGGAATACCAGGAAGCGGTTATCTCAGCCATGCAATAAATTTATATCTACGCTGTAAGTATTTCATAGTCTTTTATAGATGAGAAACATATTTTCCATCCATTAATTGTGTATAATCAGATAAAAAGGTGCATTGCTGCCTCTCTTTTATATAAAAAAATAAGTATTGTGTTTGTGTGAATTCCTCCTCATCAATTCCTTGATGAGATCTTTTGTGTGAATACAAAGTTACCTATTTAAAAAAATAATAATAATAAGTTGCGTGTTTCCGATACTGTTGCAGATATTATTTTAATTAGGTTTTAGGGATTTCTATAGTGTTCCAAAATGTAAAACCGACGAAATTAGATTAACCTACAACAATATCAAATTTGGTCATGCAAGTCCAAATTAGAGATTTTAAAGATTTCAAGAATTTGTTTTGGCTAATTTTTGTTAATGAATGTTAATGTAGCCGAATACATTTTTTGCTATCATATCTCTATGAGGGTCTAGTGTTTATCACCTTTTTTTACATCTTGACCATTTATTTGTAAACTAGTAGTTCTACTCACTGTGGCTTTATCTACCCTGCAGTATTTTACTGTGACTAAAACAAGGCTATCTTCTGATATGGTTCAATTGAAATTTACAAAGTGCATATATTCTGAGGCTGTTTCTTTTTCTTGTCTTGTGATCATTTTTCTTTGACATTCTCTTGAACTCCTCCGCATATTTACTTACCTTGACAAGAAATAATTATCCGTACAGAAGAATGTGAGGAACTTGTTTTCTTAATAAGTTCTAGTATTTAGCATATTTCATAAAATCGGCGTATTTTTCTTATCTATCAGCTTTTTCTTCTTCATTTTTCTGTTCAAGAAAGACGATGGTAGTTTTATCCGCGATTTGTTTCATTCTCAGATAAGCCTGCTCTAGAGGATTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAGGTACTTCTTTGGTGTTTCTTTCTTAGCAAAAGGACCGCTGCTTTATTACAAAAATAATAAAAGTTGAAACTATATGTGCTTCATTCCAATGAGGTATTGGTCTTGCCATGGCTTCTAATGCACTAGTATTGATGTTCATGATGACACCTAATCGATATGTTCTTCTTATATGTAGGTTACAAGT</genome_strand>
        <mrna_strand>CGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCTGTTCCACCGCATTGGGATCCAGCATCCTTATCCAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACAGTTCCTCCTGCTGAGCTAAAAGCACACTTGGATGACCTCGGAGATTGTCTCTTTTCTGATGAAGCAAGCCCTCTGCCTGAGTGGAAGGCAAAAGAGGGTAAAAAGAAG...................................................................................................................................................................................................GTCCCCGAGGTATTCAATCGCATGTTGCAGTCGCATACCATGCAATTTACTAGCATAACAGAGACATCAAGCAAGGAT..................................................................................GGTCTCACTATAATTTGGTCAAAAAGAGGTGGTGATGTGTTTGCACAAAGCCACTCGAAGTGGCTTCAGACTGTGGCTGCTTACCCTGATGGCATACTCTTCAAACTTGTACCGATTACTTCGCTCTTAACAGGAATACCAGGAAGCGGTTATCTCAGCCATGCAATAAATTTATATCTACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGCCTGCTCTAGAGGATTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAG...............................................................................................................................................................................GTTACAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E399631" ref_strand="+" ref_description="SGN-E399631 [cSTC-1-G19]">
      <seq>cgcattgggatccatcatccttatccagatttattcaggcttatgggacacacataattgtgggtatgggtgttggaggccaggacctactttgtgttaagcagaaaccatcttcaaccgttcctcctgctgaactaaaagcacacttggatgatctcggagattgtctcttttctgatgaagcaagtccgctgcctgagtggaagtcaaaagagagtaaaaagaaggtccccgacgtattcaatcgcatgttgcagtcgcataccatgcaatttactagcataacagagacatcaagcaaggatggtctcactatgatttggtcaaaaagaggtggtgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="51846" stop="53046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52157" g_stop="52355" g_length="199"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="227" r_length="199" r_score="0.965"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52356" i_stop="52550" i_length="195">
            <donor d_prob="0.848" d_score="0.92"/>
            <acceptor a_prob="0.989" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="52551" g_stop="52628" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="305" r_length="78" r_score="0.987"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="52629" i_stop="52710" i_length="82">
            <donor d_prob="0.961" d_score="1.00"/>
            <acceptor a_prob="0.081" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="52711" g_stop="52746" g_length="36"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="341" r_length="36" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E399631" ref_strand="+">
        <total_alignment_score>0.971</total_alignment_score>
        <cumulative_length_of_scored_exons>313</cumulative_length_of_scored_exons>
        <coverage percentage="0.918" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E399631" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52157" e_stop="52355"/>
          <exon e_start="52551" e_stop="52628"/>
          <exon e_start="52711" e_stop="52746"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACAGTTCCTCCTGCTGAGCTAAAAGCACACTTGGATGACCTCGGAGATTGTCTCTTTTCTGATGAAGCAAGCCCTCTGCCTGAGTGGAAGGCAAAAGAGGGTAAAAAGAAGGTATTTTACACTCTCTAAGCAATGAAGATGCCTCAGTCCCAAACAAGCTGGGGGTGTCTATAATATATGAACCCTTGCTATTCCATTTTACATTCAGTTAAATAGGCACTTGATTTATGTTTGGGTATGTTCTGATATTTATGCACATAACTGGGGTCAATCATATCTGAATGGATTCTTATTTTAAATCTATAGGTCCCCGAGGTATTCAATCGCATGTTGCAGTCGCATACCATGCAATTTACTAGCATAACAGAGACATCAAGCAAGGATGTAAGTCACTCTCTGATTTTTTGTGTTCTGAAATGGAAGAAGTGGTAGACATGGTTAGTTATTAACGAATAATGTGGAGCAGGGTCTCACTATAATTTGGTCAAAAAGAGGTGGTGAT</genome_strand>
        <mrna_strand>ATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACCGTTCCTCCTGCTGAACTAAAAGCACACTTGGATGATCTCGGAGATTGTCTCTTTTCTGATGAAGCAAGTCCGCTGCCTGAGTGGAAGTCAAAAGAGAGTAAAAAGAAG...................................................................................................................................................................................................GTCCCCGACGTATTCAATCGCATGTTGCAGTCGCATACCATGCAATTTACTAGCATAACAGAGACATCAAGCAAGGAT..................................................................................GGTCTCACTATGATTTGGTCAAAAAGAGGTGGTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E274012" ref_strand="+" ref_description="SGN-E274012 [cLEN-8-M2]">
      <seq>tcagccatgcaataaatttatatctacgctataagcctgctctagaggatttacagtgtttcctcgagtttcaagttcctagccagtgggcgccattgttctgcgagctgcctcttagccatcaaagaaaagtggcatcttgccctgcattgcagttctgtttattcggcccaaagctttgtgtgagacctacccaggttacaagtggtcaaaaacccgtcattggtttgcgcttgtatttagaagggaagaaatgcaaccacttagccatacatgtacaacatctttctagtttaccaaacattatggcatctaagtctgttaataacctaaccttatgcaagccatgtcaatggcgaggctccgatgattatgaatctagcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="52565" stop="54572"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="52865" g_stop="52894" g_length="30"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="30" r_length="30" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="52895" i_stop="53743" i_length="849">
            <donor d_prob="0.958" d_score="0.00"/>
            <acceptor a_prob="0.690" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="53744" g_stop="53910" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="31" r_stop="197" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="53911" i_stop="54085" i_length="175">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="54086" g_stop="54272" g_length="187"/>
          <reference_exon_boundary r_type="cDNA" r_start="198" r_stop="384" r_length="187" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E274012" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E274012" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="52865" e_stop="52894"/>
          <exon e_start="53744" e_stop="53910"/>
          <exon e_start="54086" e_stop="54272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCCATGCAATAAATTTATATCTACGCTGTAAGTATTTCATAGTCTTTTATAGATGAGAAACATATTTTCCATCCATTAATTGTGTATAATCAGATAAAAAGGTGCATTGCTGCCTCTCTTTTATATAAAAAAATAAGTATTGTGTTTGTGTGAATTCCTCCTCATCAATTCCTTGATGAGATCTTTTGTGTGAATACAAAGTTACCTATTTAAAAAAATAATAATAATAAGTTGCGTGTTTCCGATACTGTTGCAGATATTATTTTAATTAGGTTTTAGGGATTTCTATAGTGTTCCAAAATGTAAAACCGACGAAATTAGATTAACCTACAACAATATCAAATTTGGTCATGCAAGTCCAAATTAGAGATTTTAAAGATTTCAAGAATTTGTTTTGGCTAATTTTTGTTAATGAATGTTAATGTAGCCGAATACATTTTTTGCTATCATATCTCTATGAGGGTCTAGTGTTTATCACCTTTTTTTACATCTTGACCATTTATTTGTAAACTAGTAGTTCTACTCACTGTGGCTTTATCTACCCTGCAGTATTTTACTGTGACTAAAACAAGGCTATCTTCTGATATGGTTCAATTGAAATTTACAAAGTGCATATATTCTGAGGCTGTTTCTTTTTCTTGTCTTGTGATCATTTTTCTTTGACATTCTCTTGAACTCCTCCGCATATTTACTTACCTTGACAAGAAATAATTATCCGTACAGAAGAATGTGAGGAACTTGTTTTCTTAATAAGTTCTAGTATTTAGCATATTTCATAAAATCGGCGTATTTTTCTTATCTATCAGCTTTTTCTTCTTCATTTTTCTGTTCAAGAAAGACGATGGTAGTTTTATCCGCGATTTGTTTCATTCTCAGATAAGCCTGCTCTAGAGGATTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAGGTACTTCTTTGGTGTTTCTTTCTTAGCAAAAGGACCGCTGCTTTATTACAAAAATAATAAAAGTTGAAACTATATGTGCTTCATTCCAATGAGGTATTGGTCTTGCCATGGCTTCTAATGCACTAGTATTGATGTTCATGATGACACCTAATCGATATGTTCTTCTTATATGTAGGTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCG</genome_strand>
        <mrna_strand>TCAGCCATGCAATAAATTTATATCTACGCT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATAAGCCTGCTCTAGAGGATTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAG...............................................................................................................................................................................GTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E276485" ref_strand="+" ref_description="SGN-E276485 [cLEN-17-N18]">
      <seq>tctacgctataagcctgctctagaggatttacagtgtttcctcgagtttcaagttcctagccagtgggcgccattgttctgcgagctgcctcttagccatcaaagaaaagtggcatcttgccctgcattgcagttctgtttattcggcccaaagctttgtgtgagacctacccaggttacaagtggtcaaaaacccgtcattggtttgcgcttgtatttagaagggaagaaatgcaaccacttagccatacatgtacaacatctttctagtttaccaaacattatggcatctaagtctgttaataacctaaccttatgcaagccatgtcaatggcgaggctccgatgattatgaatctagcgaccaattcttagatcctgtcagatggccgagatattccaacgtgtgctcatctgtagttaagcatgatccaagctggatgcagggcgaaacgagtggcgtctttgtggtaactggtgcacaccttgtcagcaaagggaagtggcctaagacagtgcttcacctgcgtctacttttcacctatcttcctaactgcacaatacgaaagacagagtgggcagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="53444" stop="54792"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53744" g_stop="53910" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="9" r_stop="175" r_length="167" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53911" i_stop="54085" i_length="175">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54086" g_stop="54492" g_length="407"/>
          <reference_exon_boundary r_type="cDNA" r_start="176" r_stop="582" r_length="407" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E276485" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E276485" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53744" e_stop="53910"/>
          <exon e_start="54086" e_stop="54492"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAAGCCTGCTCTAGAGGATTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAGGTACTTCTTTGGTGTTTCTTTCTTAGCAAAAGGACCGCTGCTTTATTACAAAAATAATAAAAGTTGAAACTATATGTGCTTCATTCCAATGAGGTATTGGTCTTGCCATGGCTTCTAATGCACTAGTATTGATGTTCATGATGACACCTAATCGATATGTTCTTCTTATATGTAGGTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATGCAGGGCGAAACGAGTGGCGTCTTTGTGGTAACTGGTGCACACCTTGTCAGCAAAGGGAAGTGGCCTAAGACAGTGCTTCACCTGCGTCTACTTTTCACCTATCTTCCTAACTGCACAATACGAAAGACAGAGTGGGCAGC</genome_strand>
        <mrna_strand>ATAAGCCTGCTCTAGAGGATTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAG...............................................................................................................................................................................GTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATGCAGGGCGAAACGAGTGGCGTCTTTGTGGTAACTGGTGCACACCTTGTCAGCAAAGGGAAGTGGCCTAAGACAGTGCTTCACCTGCGTCTACTTTTCACCTATCTTCCTAACTGCACAATACGAAAGACAGAGTGGGCAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302377" ref_strand="+" ref_description="SGN-E302377 [cLEW-27-O4]">
      <seq>tttacagtgtttcctcgagtttcaagttcctagccagtgggcgccattgttctgcgagctgcctcttagccatcaaagaaaagtggcatcttgccctgcattgcagttctgtttattcggcccaaagctttgtgtgagacctacccaggtacttctttggtgtttctttcttagcaaaaggaccgctgctttattacaaaaataataaaagttgaaactatatgtgcttcattccaatgaggtattggtcttgccatggcttctaatgcactagtattgatgttcatgatgacacctaatcgatatgttcttcttatatgtaggttacaagtggtcaaaaacccgtcattggtttgcgcttgtatttagaagggaagaaatgcaaccacttagccatacatgtacaacatctttctagtttaccaaacattatggcatctaagtctgttaataacctaaccttatgcaagccatgtcaatggcgaggctccgatgattatgaatctagcgaccaattcttagatcctgtcagatggccgagatattccaacgtgtgctcatctgtagttaagcatgatccaagctggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="53463" stop="54652"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53763" g_stop="54352" g_length="590"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="590" r_length="590" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E302377" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>590</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E302377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53763" e_stop="54352"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAGGTACTTCTTTGGTGTTTCTTTCTTAGCAAAAGGACCGCTGCTTTATTACAAAAATAATAAAAGTTGAAACTATATGTGCTTCATTCCAATGAGGTATTGGTCTTGCCATGGCTTCTAATGCACTAGTATTGATGTTCATGATGACACCTAATCGATATGTTCTTCTTATATGTAGGTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATG</genome_strand>
        <mrna_strand>TTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAGGTACTTCTTTGGTGTTTCTTTCTTAGCAAAAGGACCGCTGCTTTATTACAAAAATAATAAAAGTTGAAACTATATGTGCTTCATTCCAATGAGGTATTGGTCTTGCCATGGCTTCTAATGCACTAGTATTGATGTTCATGATGACACCTAATCGATATGTTCTTCTTATATGTAGGTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E263116" ref_strand="+" ref_description="SGN-E263116 [cLEG-62-A5]">
      <seq>cgagctgcctcttagccatcaaagaaaagtggcatcttgccctgcattgcagttctgtttattcggcccaaagctttgtgtgagacctacccaggttacaagtggtcaaaaacccgtcattggtttgcgcttgtatttagaagggaagaaatgcaaccacttagccatacatgtacaacatctttctagtttaccaaacattatggcatctaagtctgttaataacctaaccttatgcaagccatgtcaatggcgaggctccgatgattatgaatctagcgaccaattcttagatcctgtcagatggccgagatattccaacgtgtgctcatctgtagttaagcatgatccaagctggatgcagggcgaaacgagtggcgtctttgtggtaactggtgcacaccttgtcagcaaagggaagtggcctaagacagtgcttcacctgcgtctacttttcacctatcttcctaactgcacaatacgaaagacagagtgggcagctacaccagagggtactcataggtcaagtttcttaacaaatctcagcacaacttttactttcactcagcggacaaagacagatgctgcaccaaagcagcttcctgctgctcttaactcgggcgtatatccagacggacctccagtaccagttcgatcaacaaagctgctcaagtatgtagatacggctgagattgcacgagggccatacgacactcctggacattggttggtactgctgctagcttgttacagaaggtgggaagatanggttgcatgtgaagttgctcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="53517" stop="55084"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="53817" g_stop="53910" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="53911" i_stop="54085" i_length="175">
            <donor d_prob="0.967" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="54086" g_stop="54784" g_length="699"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="790" r_length="696" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E263116" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>793</cumulative_length_of_scored_exons>
        <coverage percentage="1.004" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E263116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="53817" e_stop="53910"/>
          <exon e_start="54086" e_stop="54784"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAGGTACTTCTTTGGTGTTTCTTTCTTAGCAAAAGGACCGCTGCTTTATTACAAAAATAATAAAAGTTGAAACTATATGTGCTTCATTCCAATGAGGTATTGGTCTTGCCATGGCTTCTAATGCACTAGTATTGATGTTCATGATGACACCTAATCGATATGTTCTTCTTATATGTAGGTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATGCAGGGCGAAACGAGTGGCGTCTTTGTGGTAACTGGTGCACACCTTGTCAGCAAAGGGAAGTGGCCTAAGACAGTGCTTCACCTGCGTCTACTTTTCACCTATCTTCCTAACTGCACAATACGAAAGACAGAGTGGGCAGCTACACCAGAGGGTACTCATAGGTCAAGTTTCTTAACAAATCTCAGCACAACTTTTACTTTCACTCAGCGGACAAAGACAGATGCTGCACCAAAGCAGCTTCCTGCTGCTCTTAACTCGGGCGTATATCCAGACGGACCTCCAGTACCAGTTCGATCAACAAAGCTGCTCAAGTATGTAGATACGGCTGAGATTGCACGAGGGCCATACGACACTCCTGGACATTGGTTGGTAACTGCTGCTAAGCTTGTTACAGAAGGTGGGAAGATAGGTTTGCATGTGAAGTTTGCTCTA</genome_strand>
        <mrna_strand>CGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAG...............................................................................................................................................................................GTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATGCAGGGCGAAACGAGTGGCGTCTTTGTGGTAACTGGTGCACACCTTGTCAGCAAAGGGAAGTGGCCTAAGACAGTGCTTCACCTGCGTCTACTTTTCACCTATCTTCCTAACTGCACAATACGAAAGACAGAGTGGGCAGCTACACCAGAGGGTACTCATAGGTCAAGTTTCTTAACAAATCTCAGCACAACTTTTACTTTCACTCAGCGGACAAAGACAGATGCTGCACCAAAGCAGCTTCCTGCTGCTCTTAACTCGGGCGTATATCCAGACGGACCTCCAGTACCAGTTCGATCAACAAAGCTGCTCAAGTATGTAGATACGGCTGAGATTGCACGAGGGCCATACGACACTCCTGGACATTGGTTGGT-ACTGCTGCT-AGCTTGTTACAGAAGGTGGGAAGATANGGTTGCATGTGAAG-TTGCTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E398116" ref_strand="+" ref_description="SGN-E398116 [TUS-41-B3](-)">
      <seq>cgaatcataattttttgcgtgtacatattctgaggtagccttgtccttttctttatatcatttttattcagttacatttagtcttatcagcttccaatatcttgatgatatatcatattgtttaatttatccaagaaatggccaacaggggaggaaaatgttataaaagggtccagaagaatttagtggaagaantcgatttatttaaaggtctttccaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="54499" stop="55303"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="54799" g_stop="55025" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="228" r_length="228" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E398116" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>227</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E398116" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="54799" e_stop="55025"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGAATCATAATTTCTTGTGTGTACATATTCTGAGGTAGCCTTGTCCTTTTCTTTATATCATTTTTATTCAGTTACATTTAGTCTTATCAGCTTCCAATATCTTGATGATATATCATATTGTTTAATTTATCCAAGAAATGGCCAACAGGGGAGGAAAATGTTATAGTATTGTACAGAAGAATTTAGTGGAAGAA-TCGATTTATTTTTTGTTCTTTCCACCTTTTCAA</genome_strand>
        <mrna_strand>CGAATCATAATTTTTTGCGTGTACATATTCTGAGGTAGCCTTGTCCTTTTCTTTATATCATTTTTATTCAGTTACATTTAGTCTTATCAGCTTCCAATATCTTGATGATATATCATATTGTTTAATTTATCCAAGAAATGGCCAACAGGGGAGGAAAATGTTATAAAAGGGTCCAGAAGAATTTAGTGGAAGAANTCGATTTATTTAAAGGTCTTTCCAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E569056" ref_strand="+" ref_description="SGN-E569056 [13436]">
      <seq>actgtcgattatagcaagaaaactttaacaatcgacccattttcagacgtcagcttggtcagaggcttggcgctgttggtttctacctagaacgcaagtttggttctcctcaagatgtccaaggatgtttggttggtaacgagattttcatcgtgcaatcgcgacctcaaccccagtgagatgttgattttgcactgaacttcttcacaatagtgtttgtaaaattcagcatctctctgaggtgtacatatagttgattaaataagcttatactagtcctatacaagtaaaggggcagctcggtgcattaagctctcccgttatgtgtgaggtctggagaggagtcggaccacaacagtctattgta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="68565" stop="67602"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68265" g_stop="67902" g_length="364"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E569056" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>364</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E569056" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68265" e_stop="67902"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACTGTCGATTATAGCAAGAAACCTTTAACAATCGACCCCATTTTCAGACGTCAGCTCGGTCAGAGGCTTGGCGCTGTTGGTTTCTACCTAGAACGCAAGTTTGGTTCTCCTCAAGATGTCGAAGGATGTTTGGTTGGTAATGAGATTTTCATCGTGCAATCGCGACCTCAACCCCAGTGAGATATCGAGTTTGCACTGTACTTGTTCACAATAGCGTTTGTAAAATTCAGCATCTCTCTGAGGTGTAC--ACAGTTGATTAAATAAGCTTATACTAGTCCTATACGAGTAAAGGAGCAGCTTGATGCATTAAG-T-TACCGTTATGTGCAAGCTCTGGAGAAGAGTCGGACCACGAGAGTCTACTGTA</genome_strand>
        <mrna_strand>ACTGTCGATTATAGCAAGAAAACTTTAACAATCGACC-CATTTTCAGACGTCAGCTTGGTCAGAGGCTTGGCGCTGTTGGTTTCTACCTAGAACGCAAGTTTGGTTCTCCTCAAGATGTCCAAGGATGTTTGGTTGGTAACGAGATTTTCATCGTGCAATCGCGACCTCAACCCCAGTGAGATGTTGATTTTGCACTGAACTTCTTCACAATAGTGTTTGTAAAATTCAGCATCTCTCTGAGGTGTACATATAGTTGATTAAATAAGCTTATACTAGTCCTATACAAGTAAAGGGGCAGCTCGGTGCATTAAGCTCTCCCGTTATGTGTGAGGTCTGGAGAGGAGTCGGACCACAACAGTCTATTGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E589313" ref_strand="+" ref_description="SGN-E589313 [42885]">
      <seq>ctcacacataacgggagagcttaatgcaccgagctgtccctttacttgtataggactagtataagcttatttaatcaactatatgtacacctcagagagatgctgaattttacaaacactattgtgaaaaagttcagtgcaaaatcaacatctcactggggttgaggtcgcgattgcacgatgaaaatctcgttaccaaccaaacatccttcgacatcttgaggagaaccaaacttgcgttctaggtagaaaccaacagcgccaagcctctgaccaagctgacgtctgaaaatggggtcgattgttaaaggtttcttgctataatcgacagtcaagagaataacttctccgtcagcaggggaattgccacctacaaccatctcctcactaaagttggcgaatgccagtgtgcgcactgtgtcgtcaaatttaccactagatagacgccacggagtaccccttgttcctgaagcgagtgtttcaccgagtccaggtgcaatttcagcctcaatgaagttatgattgttgtccgttgggctcagtgtgtggaggacaaaagataaatctggtgaaagcatttcttgcactagcacagacatcttagcatctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="67638" stop="68846"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="67938" g_stop="68546" g_length="609"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="613" r_length="613" r_score="0.941"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E589313" ref_strand="+">
        <total_alignment_score>0.941</total_alignment_score>
        <cumulative_length_of_scored_exons>609</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E589313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="67938" e_stop="68546"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTGCACATAACGGTA-A-CTTAATGCATCAAGCTGCTCCTTTACTCGTATAGGACTAGTATAAGCTTATTTAATCAAC--TGTGTACACCTCAGAGAGATGCTGAATTTTACAAACGCTATTGTGAACAAGTACAGTGCAAACTCGATATCTCACTGGGGTTGAGGTCGCGATTGCACGATGAAAATCTCATTACCAACCAAACATCCTTCGACATCTTGAGGAGAACCAAACTTGCGTTCTAGGTAGAAACCAACAGCGCCAAGCCTCTGACCGAGCTGACGTCTGAAAATGGGGTCGATTGTTAAAGGTTTCTTGCTATAATCGACAGTCAAGTGAATAACTTCTCCGTCAGCAGGGGAATTGCCACCTACAACCATCTCCTCGCTAAAGTTGGCGAATGCTAGTGTGCGAACTGTGTCATCAAATTTACCACTAGATAGACGCCACGGTGTACCCCTTGTTCCTGAAGCGAGTGTTTCACCGAGTCCAGGTGCAATTTCAGCCTCAATGAAGTTATGATTGTTGTCCGTGGGGCTCAGTGTGTGGAGGACAAAAGACAAATCTGGTGAAAGCATTTCTTGCACTAGCACGGCCATCGTAGCATCTTTCT</genome_strand>
        <mrna_strand>CTCACACATAACGGGAGAGCTTAATGCACCGAGCTGTCCCTTTACTTGTATAGGACTAGTATAAGCTTATTTAATCAACTATATGTACACCTCAGAGAGATGCTGAATTTTACAAACACTATTGTGAAAAAGTTCAGTGCAAAATCAACATCTCACTGGGGTTGAGGTCGCGATTGCACGATGAAAATCTCGTTACCAACCAAACATCCTTCGACATCTTGAGGAGAACCAAACTTGCGTTCTAGGTAGAAACCAACAGCGCCAAGCCTCTGACCAAGCTGACGTCTGAAAATGGGGTCGATTGTTAAAGGTTTCTTGCTATAATCGACAGTCAAGAGAATAACTTCTCCGTCAGCAGGGGAATTGCCACCTACAACCATCTCCTCACTAAAGTTGGCGAATGCCAGTGTGCGCACTGTGTCGTCAAATTTACCACTAGATAGACGCCACGGAGTACCCCTTGTTCCTGAAGCGAGTGTTTCACCGAGTCCAGGTGCAATTTCAGCCTCAATGAAGTTATGATTGTTGTCCGTTGGGCTCAGTGTGTGGAGGACAAAAGATAAATCTGGTGAAAGCATTTCTTGCACTAGCACAGACATCTTAGCATCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E602146" ref_strand="+" ref_description="SGN-E602146 [55202]">
      <seq>cggcacgagggcttgttatacattgttaaatttcgatgttggtcaacattgattggtacttcatttttgcgtttagcttatcatagcataaataaatgatggattccattggtgcaatatatgtctttgccttttttttttttggtctgatgatctatctgattgcagtttatagtgaccaaggtgcaccagcatcatttaacgttcctgcaggagcagttattccatttggttccatggaaacggcattggaaatgaacaagttaatggagaccttcacattgcttgtcgaacagatagaaacagctgaaattgatggcggtgaacttgataaacattgtgaggatctccagaagttaatatcttctctattgcctggacaagatgtcattgaaagcttgggagaagtatttcccggtaatgcacgtttaatagtgcgttcaagtgctaatgtcgaggacttggcggggatgtcagctgctggactttatgattcaattcctaatgttagcccttcagatccgataaggtttggacatgctgtagcccgtgtttgggcctcgttgtatactagaagagcagtactgagccgcagagctgctggtgtgtcccagaaagacgctacaatggccgtgctagtgcaagaaatgctttcaccagatttatctttcgtcctccagacactgagcccaacggacaacaatcataacttcattgaggctgaaattgcacctggactcggtgaaacactcgcttcaggaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="69443" stop="68097"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69128" g_stop="68397" g_length="732"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="762" r_length="737" r_score="0.948"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E602146" ref_strand="+">
        <total_alignment_score>0.948</total_alignment_score>
        <cumulative_length_of_scored_exons>732</cumulative_length_of_scored_exons>
        <coverage percentage="0.961" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E602146" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69128" e_stop="68397"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAAATTTCGGTGTTGGTCAACATCGATTGGTACTTTATTTTTGCGTTTAGCTTATCATAGC----ACAAACGATGGATGCCATTGGTGCAATATATGTCTTTGCC-CTTTTTTTTTGGGTCTGATGATTTATCTGATTGCAGTTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGCCTCGTTGTATACTAGAAGAGCAGTACTGAGCCGCAGAGCTGCTGGTGTGTCCCAGAAAGATGCTACGATGGCCGTGCTAGTGCAAGAAATGCTTTCACCAGATTTGTCTTTTGTCCTCCACACACTGAGCCCCACGGACAACAATCATAACTTCATTGAGGCTGAAATTGCACCTGGACTCGGTGAAACACTCGCTTCAGGAA</genome_strand>
        <mrna_strand>TTAAATTTCGATGTTGGTCAACATTGATTGGTACTTCATTTTTGCGTTTAGCTTATCATAGCATAAATAAATGATGGATTCCATTGGTGCAATATATGTCTTTGCCTTTTTTTTTTTTGGTCTGATGATCTATCTGATTGCAGTTTATAGTGACCAAGGTGCACCAGCATCATTTAACGTTCCTGCAGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAATGAACAAGTTAATGGAGACCTTCACATTGCTTGTCGAACAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACATTGTGAGGATCTCCAGAAGTTAATATCTTCTCTATTGCCTGGACAAGATGTCATTGAAAGCTTGGGAGAAGTATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCTGCTGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGATAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGCCTCGTTGTATACTAGAAGAGCAGTACTGAGCCGCAGAGCTGCTGGTGTGTCCCAGAAAGACGCTACAATGGCCGTGCTAGTGCAAGAAATGCTTTCACCAGATTTATCTTTCGTCCTCCAGACACTGAGCCCAACGGACAACAATCATAACTTCATTGAGGCTGAAATTGCACCTGGACTCGGTGAAACACTCGCTTCAGGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E251427" ref_strand="+" ref_description="SGN-E251427 [cLEG-9-G8]">
      <seq>tagaggtgttattcctcttgttgatgcagatatacaaacctctggtgcaaaagctgcttcttgtgctcaattagcttcactggccacttcttctactaaagtttatagtgaccaaggtgcaccagcatcatttaaagttcctgctggagcagttattccatttggttccatggaaacggcattggaaacgaacaagttaatggagaccttcacattgcttgttgagcagatagaaacagctgaaattgatggcggtgaacttgataaacactgtgaggatctccagaagttaatatcttcgttattgcctggacaagatgtcatcgaaagcttgggagaaatatttcccggtaatgcacgtttaatagtgcgttcaagtgctaatgtcgaggacttggcggggatgtcagcagccggactttatgattcaattcctaatgttagcccttcagatccggtaaggtttggacatgctgtagcccgtgtttgggcctcgttgtatactagaagagcagtactgagccgcagagctgctggtgtgtcccagaaagatgcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="69747" stop="68235"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69447" g_stop="69347" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69346" i_stop="68991" i_length="356">
            <donor d_prob="0.083" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68990" g_stop="68535" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="557" r_length="456" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E251427" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>557</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E251427" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69447" e_stop="69347"/>
          <exon e_start="68990" e_stop="68535"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGAGGTGTTATTCCTCTTGTTGATGCAGATATACAAACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCACTTCTTCTACTAAAGGTAGTCTTGGTTCTTTGCAGGACAACCCTCTCTTCATATCATCCGTACTTGTTACTATTTTATTCTTAGTTGCTGTAGCTAAAATGTCAATTCTGCTTAACGAACCCTTTATTTAAAAATGAAAGTTCCATGTAAATGTTTTTGCTCCCATTCTATTTTTTTTTTTTCCTTTTTCCAGTTGAAAATTTGGTCCTTTGCATTTCCTATGTTTGTCATAGTTAAATTTCGGTGTTGGTCAACATCGATTGGTACTTTATTTTTGCGTTTAGCTTATCATAGCACAAACGATGGATGCCATTGGTGCAATATATGTCTTTGCCCTTTTTTTTTGGGTCTGATGATTTATCTGATTGCAGTTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGCCTCGTTGTATACTAGAAGAGCAGTACTGAGCCGCAGAGCTGCTGGTGTGTCCCAGAAAGATGCTA</genome_strand>
        <mrna_strand>TAGAGGTGTTATTCCTCTTGTTGATGCAGATATACAAACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCACTTCTTCTACTAAAG....................................................................................................................................................................................................................................................................................................................................................................TTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGCCTCGTTGTATACTAGAAGAGCAGTACTGAGCCGCAGAGCTGCTGGTGTGTCCCAGAAAGATGCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E551438" ref_strand="+" ref_description="SGN-E551438 [TUS-54-B7]">
      <seq>gtgttattcctcttgttgatgcagatatacaaacctctggtgcaaaagctgcttcttgtgctcaattagcttcactggccacttcttctactaaagtttatagtgaccaaggtgcaccagcatcatttaaagttcctgctggagcagttattccatttggttccatggaaacggcattggaaacgaacaagttaatggagaccttcacattgcttgttgagcagatagaaacagctgaaattgatggcggtgaacttgataaacactgtgaggatctccagaagttaatatcttcgttattgcctggacaagatgtcatcgaaagcttgggagaaatatttcccggtaatgcacgtttaatagtgcgttcaagtgctaatgtcgaggacttggcggggatgtcagcagccggactttatgattcaattcctaatgttagcccttcagatccggtaaggtttggacatgctgtagcccgtgtttgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="69742" stop="68300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69442" g_stop="69347" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69346" i_stop="68991" i_length="356">
            <donor d_prob="0.083" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68990" g_stop="68600" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="487" r_length="391" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E551438" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E551438" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69442" e_stop="69347"/>
          <exon e_start="68990" e_stop="68600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTATTCCTCTTGTTGATGCAGATATACAAACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCACTTCTTCTACTAAAGGTAGTCTTGGTTCTTTGCAGGACAACCCTCTCTTCATATCATCCGTACTTGTTACTATTTTATTCTTAGTTGCTGTAGCTAAAATGTCAATTCTGCTTAACGAACCCTTTATTTAAAAATGAAAGTTCCATGTAAATGTTTTTGCTCCCATTCTATTTTTTTTTTTTCCTTTTTCCAGTTGAAAATTTGGTCCTTTGCATTTCCTATGTTTGTCATAGTTAAATTTCGGTGTTGGTCAACATCGATTGGTACTTTATTTTTGCGTTTAGCTTATCATAGCACAAACGATGGATGCCATTGGTGCAATATATGTCTTTGCCCTTTTTTTTTGGGTCTGATGATTTATCTGATTGCAGTTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGC</genome_strand>
        <mrna_strand>GTGTTATTCCTCTTGTTGATGCAGATATACAAACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCACTTCTTCTACTAAAG....................................................................................................................................................................................................................................................................................................................................................................TTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E688587" ref_strand="+" ref_description="SGN-E688587 [t3_tus_54_B07]">
      <seq>gtgttattcctcttgttgatgcagatatacaaacctctggtgcaaaagctgcttcttgtgctcaattagcttcactggccacttcttctactaaagtttatagtgaccaaggtgcaccagcatcatttaaagttcctgctggagcagttattccatttggttccatggaaacggcattggaaacgaacaagttaatggagaccttcacattgcttgttgagcagatagaaacagctgaaattgatggcggtgaacttgataaacactgtgaggatctccagaagttaatatcttcgttattgcctggacaagatgtcatcgaaagcttgggagaaatatttcccggtaatgcacgtttaatagtgcgttcaagtgctaatgtcgaggacttggcggggatgtcagcagccggactttatgattcaattcctaatgttagcccttcagatccggtaaggtttggacatgctgtagcccgtgtttgggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="69742" stop="68300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="69442" g_stop="69347" g_length="96"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="96" r_length="96" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="69346" i_stop="68991" i_length="356">
            <donor d_prob="0.083" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="68990" g_stop="68600" g_length="391"/>
          <reference_exon_boundary r_type="cDNA" r_start="97" r_stop="487" r_length="391" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E688587" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>487</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E688587" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="69442" e_stop="69347"/>
          <exon e_start="68990" e_stop="68600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTTATTCCTCTTGTTGATGCAGATATACAAACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCACTTCTTCTACTAAAGGTAGTCTTGGTTCTTTGCAGGACAACCCTCTCTTCATATCATCCGTACTTGTTACTATTTTATTCTTAGTTGCTGTAGCTAAAATGTCAATTCTGCTTAACGAACCCTTTATTTAAAAATGAAAGTTCCATGTAAATGTTTTTGCTCCCATTCTATTTTTTTTTTTTCCTTTTTCCAGTTGAAAATTTGGTCCTTTGCATTTCCTATGTTTGTCATAGTTAAATTTCGGTGTTGGTCAACATCGATTGGTACTTTATTTTTGCGTTTAGCTTATCATAGCACAAACGATGGATGCCATTGGTGCAATATATGTCTTTGCCCTTTTTTTTTGGGTCTGATGATTTATCTGATTGCAGTTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGC</genome_strand>
        <mrna_strand>GTGTTATTCCTCTTGTTGATGCAGATATACAAACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCACTTCTTCTACTAAAG....................................................................................................................................................................................................................................................................................................................................................................TTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E704858" ref_strand="+" ref_description="SGN-E704858 [FA25BH06]">
      <seq>gaaaaacgttagctcttggaatgatccaattggagcacttacagtaggaatccaacagctaggcctatctggttggaagcccgaggagtgcaaagctgttggaaatgaacttctgtcatggaaagaaaggggtatttcagaaattgaaggcagcgaagatggtaagactatatgggcattaagactaaaagcgactcttgatagaagtcgaaggttaactgaggagtattccgagacacttatccaaatattccctgaaaaagtacagattttaggaaaatctttgggaattcctgaaaatactgtcagaacatttactgaagctgaaattcgagcaggtgtggtttttcaggtttcgaagtttgctactctacttttgaaggctgttagaaggacaattgggtcatcgggatgggacgttctcgttccaggagatgcttttggagagctaatacaggtggatagaattatccccggcactctaccatcatctgcaacaggacctgttattcttgtagtgaacaaagctgatggagatgaagaggtgactgccgcagggagtaacatatctggagttgtacttctacaggagctaccacatttatctcatctaggtgttagggcccggcaggaaaaggttgtttttgtgacctgcgatgacgatgacaaagtttctgatgtaagacagctactaggaaaatatgtgaggttaaaagcatcatcaactggtgtaaagttaactgcttcttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="72656" stop="69439"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72356" g_stop="72208" g_length="149"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="149" r_length="149" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72207" i_stop="72120" i_length="88">
            <donor d_prob="0.857" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72119" g_stop="72001" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="150" r_stop="268" r_length="119" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72000" i_stop="71433" i_length="568">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.885" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="71432" g_stop="71362" g_length="71"/>
          <reference_exon_boundary r_type="cDNA" r_start="269" r_stop="339" r_length="71" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="71361" i_stop="71228" i_length="134">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.242" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="71227" g_stop="71110" g_length="118"/>
          <reference_exon_boundary r_type="cDNA" r_start="340" r_stop="457" r_length="118" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="71109" i_stop="70720" i_length="390">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="70719" g_stop="70633" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="458" r_stop="544" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="70632" i_stop="70525" i_length="108">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="70524" g_stop="70438" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="545" r_stop="631" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="70437" i_stop="69958" i_length="480">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="69957" g_stop="69881" g_length="77"/>
          <reference_exon_boundary r_type="cDNA" r_start="632" r_stop="708" r_length="77" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="69880" i_stop="69781" i_length="100">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="69780" g_stop="69739" g_length="42"/>
          <reference_exon_boundary r_type="cDNA" r_start="709" r_stop="750" r_length="42" r_score="0.976"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E704858" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>750</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E704858" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72356" e_stop="72208"/>
          <exon e_start="72119" e_stop="72001"/>
          <exon e_start="71432" e_stop="71362"/>
          <exon e_start="71227" e_stop="71110"/>
          <exon e_start="70719" e_stop="70633"/>
          <exon e_start="70524" e_stop="70438"/>
          <exon e_start="69957" e_stop="69881"/>
          <exon e_start="69780" e_stop="69739"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAACGTTAGCTCTTGGAATGATCCAATTGGAGCACTTACAGTAGGAATCCAACAGCTAGGCCTATCTGGTTGGAAGCCCGAGGAGTGCAAAGCTGTTGGAAATGAACTTCTGTCATGGAAAGAAAGGGGTATTTCAGAAATTGAAGGTATCTTATTGTCATCAATGATTTATCATGCGTGCAATCAAGAATGCATCAGCAATCCTGAAAATTTTTGGGCTTATCCTTACTGAAGGCAGCGAAGATGGTAAGACTATATGGGCATTAAGACTAAAAGCGACTCTTGATAGAAGTCGAAGGTTAACTGAGGAGTATTCCGAGACACTTATCCAAATATTCCCTGAAAAAGTACAGGTATAACAACTTTTTGGAAATGAATTATTCCTTCTGTTTTAATTTTCTTGTCTTACTTTCCTTTTTAGTCTGTTTAAATAAGAATGTTTCTTTCCTTTTTGACAATTCTTTAATTCTAACTTTTCACATGACATGTTTAAGACCACAAAACTGGGCATTTTGATAGCTTTAGCTTAAGATGACAAGATTCAAAAGTCTTGTTTACTTTCTTTAACTTTGTGTCAAGACAAAACCAAACAAATTGAAACGTAGGAGTACTTCAGAAGACAGTAGTGGCTTCTAAGCTTTCAATTTTTCTCATGGTACCGGTTTGGCTATTATTTTCAGTTCTTGAGTTATTGTTCACTAGTTTGGAATTATTATTTTTAAAAACTCCATTATATGTGGCATGCCTGTAAGCTATCCAAATTGGAACTACATTTGGACCACATTGTGATATGATTAGCTAAGTCAGTTGGAGGGAAATTGATTTTCCTATATCAGCCCTTATTTCATTCAGTGTCATTGACATGCTTGTTAGGTAAGAAATATATAACTTGGGATTTTAACTGAGTATATGGTCTTGCAGATTTTAGGAAAATCTTTGGGAATTCCTGAAAATACTGTCAGAACATTTACTGAAGCTGAAATTCGAGCAGGGTATGATTGCACAAATATTTTATTGTTCTGAATATTGTTGCTCCAATCTTATCCTTCTGATTTCTCTGTCTGACAGAGGATGTTACTGTAAGTTAACAAAGTGCCTAACTTTGTAAAATACATGCAATTTGTAGTGTGGTTTTTCAGGTTTCGAAGTTTGCTACTCTACTTTTGAAGGCTGTTAGAAGGACAATTGGGTCATCGGGATGGGACGTTCTCGTTCCAGGAGATGCTTTTGGAGAGCTAATACAGGTGAATATTATATTGTCAATCTCTTATTCCAGCAATTTATTTATATATTTAGAGCTCTAGCTGGTATTTGCTCTACAAAATTGGTTAATTTGCTCGAAATGCATGCGCAAGCTGGCCCGAACATCGGGGTATAGAAAGATTTGGTTTATTTGTTAGAAGTAAGATTTTTTGTCGCAAAAGAGTCTAGAAGAATTCATTTTGATCAAGCTACAAAGCACTTGGGTTTATCTGAATGCTTGCAGTGTAACTTCTTCTATCCAGTTCAGTACTTGGTCTATGTTTTGACCTTAACTTCATGCTGTGAATTGCATCTTCTCTGTTTGAAATTTTATCCAAGGTAGAACTAGTTTTATATAGTGCTGATATGTTGTCTGATTACTCACATTTCAGGTGGATAGAATTATCCCCGGCACTCTACCATCATCTGCAACAGGACCTGTTATTCTTGTAGTGAACAAAGCTGATGGAGATGAAGAGGTTTCTAGCGCTTCTCATCTCTGTGTTGCTTCTGCAGGATCCTAAGGCATTAGAAACTTATGTATTGCACGGAAAAGGATACTGAATGGCCTGTTGACCATCTTGCAGGTGACTGCCGCAGGGAGTAACATATCTGGAGTTGTACTTCTACAGGAGCTACCACATTTATCTCATCTAGGTGTTAGGGCCCGGCAGGCGAGTTCCAAATCTTGTCTCCATGTCCTAAAGTTAATTATAGTGTCTTGATTTTGTTATCTATCACGGATTTGGAGAGAAGGTTGATAGGCAGTGGAGTGTTTTTCTTACTTTTTGTCGGATTTCTGCTTGGCTAGTATTAGCCGTATTCTTGTAGTGTCTTGCTTTTGATATGATGTATCATCATCCATTGTTTATCATGTTTCAGTTATTGCACTATTTTTTTTTTTATATTAGTTGCTATGTCTTCTTCACTGTCGTTCTTACTTTTCGTACTTAGATTTGCTATTCTCTAGCTGAGGGTCCTTAGGAAACAACCTTTCTACCTCCACGAGGTAGGGTAAGGTCTGTGCACACTCTACCCTCCCTAGACCCCACTTGTGGGATCTTACTGGGTATGTTGTTGTTGTCCAAAGTTAATTATAGGCTTTCTTTTATATGAGTGTTAGTTACAGAAGTGTGACATACTTTTGATTGCAGGAAAAGGTTGTTTTTGTGACCTGCGATGACGATGACAAAGTTTCTGATGTAAGACAGCTACTAGGAAAATATGTGAGGTTATATTCTTCAAACCTTTTAACTCACTGATGATTATAATGCATTAGTAGTTTCTTTATTTTGTCCTTAATTTTCTTTGGGTTTTCCCTTTTCTTTCAGGTTAGAAGCATCATCAACTGGTGTAAAGTTAACTGCTTCTTC</genome_strand>
        <mrna_strand>GAAAAACGTTAGCTCTTGGAATGATCCAATTGGAGCACTTACAGTAGGAATCCAACAGCTAGGCCTATCTGGTTGGAAGCCCGAGGAGTGCAAAGCTGTTGGAAATGAACTTCTGTCATGGAAAGAAAGGGGTATTTCAGAAATTGAAG........................................................................................GCAGCGAAGATGGTAAGACTATATGGGCATTAAGACTAAAAGCGACTCTTGATAGAAGTCGAAGGTTAACTGAGGAGTATTCCGAGACACTTATCCAAATATTCCCTGAAAAAGTACAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTTAGGAAAATCTTTGGGAATTCCTGAAAATACTGTCAGAACATTTACTGAAGCTGAAATTCGAGCAGG......................................................................................................................................TGTGGTTTTTCAGGTTTCGAAGTTTGCTACTCTACTTTTGAAGGCTGTTAGAAGGACAATTGGGTCATCGGGATGGGACGTTCTCGTTCCAGGAGATGCTTTTGGAGAGCTAATACAG......................................................................................................................................................................................................................................................................................................................................................................................................GTGGATAGAATTATCCCCGGCACTCTACCATCATCTGCAACAGGACCTGTTATTCTTGTAGTGAACAAAGCTGATGGAGATGAAGAG............................................................................................................GTGACTGCCGCAGGGAGTAACATATCTGGAGTTGTACTTCTACAGGAGCTACCACATTTATCTCATCTAGGTGTTAGGGCCCGGCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAGGTTGTTTTTGTGACCTGCGATGACGATGACAAAGTTTCTGATGTAAGACAGCTACTAGGAAAATATGTGAG....................................................................................................GTTAAAAGCATCATCAACTGGTGTAAAGTTAACTGCTTCTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E475540" ref_strand="+" ref_description="SGN-E475540 [cSTB-40-I22]">
      <seq>cggatgcttcaatagctatgcgtcagaagtggcgtctctgcgaaatcgggcttgaagactatgcatttgttcttttgagcaggtttgtgaatgcagttgaagctctaggcggagctgattggcttgcagagaatgtaacagtgaaaaacattagttcttggaatgatccaattggagcacttacagttggaatccaacagctaggtatatctggttggaagcccgaggaatgcaaagctgttggaaatgaacttttgtcatggaaagaaaggggtatttcagaaattgaaggcagcgaagatggtaagactatatgggcattaagactaaaagcgactcttgatagaagtcgaaggttaactgaagagtattccgagacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="73203" stop="71729"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="72903" g_stop="72875" g_length="29"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="29" r_length="29" r_score="0.966"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="72874" i_stop="72786" i_length="89">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.988" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="72785" g_stop="72733" g_length="53"/>
          <reference_exon_boundary r_type="cDNA" r_start="30" r_stop="82" r_length="53" r_score="0.981"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="72732" i_stop="72417" i_length="316">
            <donor d_prob="0.963" d_score="0.98"/>
            <acceptor a_prob="0.921" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="72416" g_stop="72208" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="83" r_stop="291" r_length="209" r_score="0.957"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="72207" i_stop="72120" i_length="88">
            <donor d_prob="0.857" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="72119" g_stop="72029" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="292" r_stop="382" r_length="91" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E475540" ref_strand="+">
        <total_alignment_score>0.969</total_alignment_score>
        <cumulative_length_of_scored_exons>382</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E475540" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="72903" e_stop="72875"/>
          <exon e_start="72785" e_stop="72733"/>
          <exon e_start="72416" e_stop="72208"/>
          <exon e_start="72119" e_stop="72029"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATGCTTCAATAGCTATGCGTCAGAAGGTATGAATTGTTTAAATGTACCAACACTAAAGTTGTCATTGATTCCTGTTACTTGAATCATCCAATACTTCCAACTTTTCATTGTGCAGTGGCGTCTCTGCGAAATTGGGCTTGAAGACTATGCATTTGTTCTTTTGAGCAGGTATACTCTGAATACCCTATATGTATGGAAAAAACATATGGGTGCATTGCAGGGGAAATACATTGGTCCACTTCAAATTATATTTTCCCTTTTCCTGACAGTAAAAGATTTTTAAAAAGTAAAATTGAGGATAGGTTGATCAATCAAACATAAGAGTATTTTATTGTTTTGATGGATCTATTCTACATTTGAGCATCAGTTGCATATGTTAATATACTTTCCATTTATTTTTTTATTTTTTCGAGGAACACTTCCCATTTATTATTATTACAATCTTCTTTTCTCCCGAGCTAAGAAATTTTCAATCGAAATATAGGTTTGTGAATGCAGTTGAAGCTCTAGGAGGAGCTGATTGGCTTGCAGAGAATGTAACTGTGAAAAACGTTAGCTCTTGGAATGATCCAATTGGAGCACTTACAGTAGGAATCCAACAGCTAGGCCTATCTGGTTGGAAGCCCGAGGAGTGCAAAGCTGTTGGAAATGAACTTCTGTCATGGAAAGAAAGGGGTATTTCAGAAATTGAAGGTATCTTATTGTCATCAATGATTTATCATGCGTGCAATCAAGAATGCATCAGCAATCCTGAAAATTTTTGGGCTTATCCTTACTGAAGGCAGCGAAGATGGTAAGACTATATGGGCATTAAGACTAAAAGCGACTCTTGATAGAAGTCGAAGGTTAACTGAGGAGTATTCCGAGACACT</genome_strand>
        <mrna_strand>CGGATGCTTCAATAGCTATGCGTCAGAAG.........................................................................................TGGCGTCTCTGCGAAATCGGGCTTGAAGACTATGCATTTGTTCTTTTGAGCAG............................................................................................................................................................................................................................................................................................................................GTTTGTGAATGCAGTTGAAGCTCTAGGCGGAGCTGATTGGCTTGCAGAGAATGTAACAGTGAAAAACATTAGTTCTTGGAATGATCCAATTGGAGCACTTACAGTTGGAATCCAACAGCTAGGTATATCTGGTTGGAAGCCCGAGGAATGCAAAGCTGTTGGAAATGAACTTTTGTCATGGAAAGAAAGGGGTATTTCAGAAATTGAAG........................................................................................GCAGCGAAGATGGTAAGACTATATGGGCATTAAGACTAAAAGCGACTCTTGATAGAAGTCGAAGGTTAACTGAAGAGTATTCCGAGACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736374" ref_strand="+" ref_description="SGN-E736374 [LC05CC02]">
      <seq>ccctattaatgctcgaaactggtggcggaagcttgaggttgttcgataactagttgttgaaaacatggatagttcacatcgcttggaggctctcacgtatgcagctgtctatctaaagtggataaatacagggcaaattccttgccttgaagatgggggtcaccatcgaccaaatagacatgcagagatttccaggcttatatttcgtgaagtagaaaaagtcttgagcaggaaagacactacacttcaggaaatacttgtgatccgcaagatgcaaccgtgcttgccttcttttaaagcagaattcactgcatccgttcctttaacgagaatcagggacatcgctcataggaatgatattccgcatgatcttaagcaagaaatcaaacatactatacaaaacaagctccatagaaatgctggccctgaagatctagtatccacagaagcaatgctcgaaagaattaccaaacaacctggacaatacagtgaggcatttgtacagcaattcaagattttccacaatgaactaaaagatttcttcaatgctgggagtcttgatgaacagctggaatctataagagaatcactcgacggaagtagcttgacaatgctttcatcattcttggagtccaaaaaggaattggttagattggatgaaaaacataatgtttcagagactgaaagaactggatttctagtcaggactatcaactctctgaatgctcttcgtgaagtaatttccaagggtcttgaaagtggcctccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="77957" stop="72616"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77660" g_stop="77630" g_length="31"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="31" r_length="31" r_score="0.839"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77629" i_stop="76248" i_length="1382">
            <donor d_prob="0.942" d_score="0.00"/>
            <acceptor a_prob="0.994" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76247" g_stop="76161" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="32" r_stop="118" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76160" i_stop="76092" i_length="69">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76091" g_stop="75960" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="119" r_stop="250" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75959" i_stop="75118" i_length="842">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75117" g_stop="74992" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="376" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74991" i_stop="74881" i_length="111">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74880" g_stop="74702" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="377" r_stop="555" r_length="179" r_score="0.994"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74701" i_stop="74005" i_length="697">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="74004" g_stop="73920" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="556" r_stop="640" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="73919" i_stop="73043" i_length="877">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="73042" g_stop="72915" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="641" r_stop="768" r_length="128" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E736374" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>768</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77660" e_stop="77630"/>
          <exon e_start="76247" e_stop="76161"/>
          <exon e_start="76091" e_stop="75960"/>
          <exon e_start="75117" e_stop="74992"/>
          <exon e_start="74880" e_stop="74702"/>
          <exon e_start="74004" e_stop="73920"/>
          <exon e_start="73042" e_stop="72915"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATAAGAATGCTCGAAACTGGTGGCGGAAGGTGAGAAGATAGATTAGATCTCGTCTTGATGGCATGTTTGCATTCTGGAAATTGACTGTGCCATAAAAGAATTACTTCTGTGCAAGATAGCATCACAGGGCATCTCTGCAATTTATTTTCTATAATTCATCAATCTGCATTGTTGGTATCCTCACTATTGCAAGAGTGTCTTCTTTTAAGCTCACTCATCACTTGTGTGTGAAGTCCTCCAAGTGTGTCTCCTTTTAGCTATGGGGATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTGCTAACACTCATGATGATTAATGAGTGGAGAAACGGTATGAAGGAAGAGATGGAATGAGCAAAGAGGGAAGAGAATAACTTTCCTTGCGTTCTGTGTAAGATCAAGTGTGGCCACAGAGGAAAGTTGGAGAGAGATGTTTCCAGGAGATTGAGAGATATTTTTTGTAGAGCGAGCACTTGGTTCTTATGCAAATTGACTGATGAACTACAATATTCTCTTCTTTCAGTTTTATTTGTTGCTAAGTAGTCCATGGAGAAATTGATTGCTCTCCATTTGGTGGTCTACTATACTACAAGTTGCTTTTCATCCATCAGATTAACAGGCCAAAACATATCTTGAGATAGCTATGTGAAAGTGCATTTTCTTGTGCTTAGATGAAGCTTGAATTTGTTGTTCAGCTATATCAATAAGGATGGGAGAGCCGTTACTTCATATTAGATTTAGATTATTGTTATCCTTTGCCTTATTTAAGATGTTTTTTTAATGCCAGTACAATGATATATCTTGAGATAGTTACATAGTGGTGCCTGTTAGTGTGGTTTGGCGAAGTTGTTTCTCATTGATACCAATAAGGATGATAAAACTATCATTTACTGTTAGATTTAGGTTATTGTTACTGGTTCTCATTAGAGATACAGTATGGAATAGCAGCGGCTCAAACAGAGAGACAGAGGAAGCATGAGCTTTTAAAAGCTAAAACTTCCTAGCATAATGCTAATGAGTTGGCTGTATGTGAACTCATAAGTCATAGCAAAACTATTGGCGTCTATTTGAAATATTCCCCTTTTCTCATTCTTTTAACTTTACTAATTTGATTATATTTAAAGATAGTTTTAGTTCTTCTCAGTTGGAGATAACTAAATATACTTTGGAACAACGGTAGATTGTGTGATTAAAAAATAGCTGGTTGAAGAGAGGTAACACCAGCACTAAAGCATGAGAAGTGATGTTATTCTCTATTAATTGCAATTCTTGTGGTTTGTTACTTTTCCATTTCGTGAAAAGGCTCTAACTTCAGAATTGTCTACATCTCTTTATAATTAACTGTCTCCTTTTTTTTTTACTGGTTTTAGCTTGAGGTTGTTCGAGAACTAGTTGTTGAAAACATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCAGCTGTCTATCTAAAGGTCTCGTATATTTTTAGATGACTTGCTTGATTCATTTCTATCTCTACTGAATATTACTCTTGGGTGCAGTGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCAGAGATTTCCAGGCTTATATTTCGTGAAGTAGAAAAAGTCTTGAGCAGGAAAGACACTACACTTCAGGTGTTCAACCGTTAAGTGCACCTCATTACGCTTATTTTAATTTTTGTTATGTCTTTCGATTCTGGAACATGTTGGTTGCTCTTGAGAAATTAATGTTGATCCGTTGAACTGGTTCAATTCGTTCTGCAAATTCTTATTCGATTTGTTAAGTGGTGGTACTATATGGTAACAATAAGTCATAGGTAACTGGAAATCTCAACAAGGTAGAGGGGAAGCCCATTATCTGCCGAGTTTCGAACTGTGCCTTTTGTCCCTCAGGAATTTCTCGGTTATAAAAAATGTGACTGGAAATCACACAAATGTAACTTCAGTTTAGACGCAACAGTAGATATTGATCTCTTTAGTATTTTGTTAGGAAGAATTCAGTTGATCTATGTTTTATTCCTTGAATTTTTATTTAGAGCACTGCTCTGAAGAGAAAATGTTATTGCTTCTACAATTGAGCTAATTCTGTGGTTCAGTTTTTTTTCTTCTTGATGGTAAAATCAAATATGCTTTTCTAATGAAGAAGGGTCTGAACTTCTGACTGCTTTTCTTTCTTAAATCTCATTAATATAGTTAGAAAGTTCCGTCGGCAAAGTAACAATTGGTCAATATAAGCTCTTGCTTCAAATATTATTAGACCATACATCTGCTGTCTGTAATATGATTATGAGATTTAAAGCTTTTGAGTTGAAATGCAAACAAAAAGGTAACTTGGGAACATGATACAGGAAGGAAAGGGAGTTAGAAAAATCATCACTCTGAACTTTGTGGATATGAGTCAACCGTTATCTTGTTCTCGAGCTTTTCCTTACCCAGTTTTGAGTGGCTTAGAAAAGTTTTCTTTTCATTATATGCAGGAAATACTTGTGATCCGCAAGATGCAACCGTGCTTGCCTTCTTTTAAAGCAGAATTCACTGCATCCGTTCCTTTAACGAGAATCAGGGACATCGCTCATAGGAATGATATTCCGCATGATCTTAAGGTTGTATACTACCAAAATACTTATTTTTAATTTTTCCTTGCATTCTCAATATTTTCATGTTTTTTACGTAATATATTTGTCCTTCTTACTATTAAAATAACCTTACTTCAGCAAGAAATCAAACATACTATACAAAACAAGCTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGAATTACCAAACAACCTGGACAATACAGTGAGGCATTTGTAGAGCAATTCAAGATTTTCCACAATGAACTAAAAGATTTCTTCAATGCTGGGAGGTATGACCTTCATCTCTTACTTGTTTCAAAATATTTGATTTCACAAAAAGTCAGTCCTATTATGGGATAAAAAGGAGATAAGTTTAGTAGATCGACTAATCAAGCTTCTCCGTAGCATGCATTGGTCCAGATCCATTACTTTATAAAATACGCTTCTTCACTTGCTAGATAATAGTGTCTCACCAGTATGTTGTTCCTCAATTTCTTCCTGAATTGTTTTTCTCTACAACAATGTTTTTTCTTTCCTATATTAAATTTTGCTACTTTGCAGTACCCTCACTTTATTAATTGAGAGGTATCTAGACATGACATGTCTGAGAGATCAGTTGGCTCGTGATGTATGAACTTCACTGTTTGCTATCATACGTGCAAATGTGGTTCTCTCCCAAGGAGAAAAAAGTAGATTGATTGCATTGTTATAGAGTCGTTTAAGGATATTGTTAAGTAACTTTTAGTCTGATTAAATGTGCTCTTTGACAGTGAAGAAAAATGATTTGGGTGCATGTTATAGAATTTTCTCGTCCTTAGTAATGGGTCACCCTTCAAGGGATATGTTTCTCCAGTACGTAATTCCCAATCATGAACGTCCGTATGATTTACACGGAATTAATTAGGTGCAATATGTTCCTACAAAAATGCTTACACACTGGAAAATGAAATTTGCTTGAAATAACTTCTTTCTGTTCTGTCTATTCAGTCTTGATGAACAGCTGGAATCTATAAGAGAATCACTCGACGGAAGTAGCTTGACAATGCTTTCATCATTCTTGGAGTCCAAAAAGGTCAGTGTATTTGTTTTGGTGATAGCTCTACCTAAGAGAAGCTCCAAAGTTTTTACTAATGCGATGAGATTTTTAGCAATAGCTGTGTGTTCTTTGATATTATGAATGTAGGTTAAACTGTTAGTTAGGTATTTATGTACATAAATTTGACTTAGATGTAATATAGTGAAGGTTTACGAGCTACTCGGGGCTTCTTTCATCTTTCTCAATTCATATGGGTCACTGACTCTGATCCGTACCCACTCTTCAACTATCTCTCTGCTCCAATTATCCTCTTCAGCCTATTCTCTGTCTCTCTACTTCAAACCCACTATCTTCTAAACAAAAGGAAAAAGGTATAAAAGAAAAACAAGTAAAAAAGGAAAATCTTTCACCCACATGTAAACCTAGAATCTGTTTACTCATGCGGCATACAAGAAGGTGTGGGAGAATAGAGTGTCCCTCACGATTGTGCAAGAATTTCTAAAAGAGTTTTCAGTGTCATGGGTGACGCCATCGATAACCTTAAGGTTTTGGGTTCGATGCTTAGATTATATCAAAATATTAAAGCAAGAAATGTATGAATAGTGATTCTCGGCAGTTTGGTGTCTTACCTTCAGGATTACTCGGCAGTCTCAGGCTATGATTGATACCATTTTCTTACTAAGTGACTGAAAAAAGGAAACAAAAAAATATTTTTCTTACGGAGGGGTAAAAATGTTATCTGGTTCACTTGCGATGAAATGCATCTTTTGCTTTCTATAGACCCTATGTCTCCTCAAGAGATAGCATATACGTATTTTGGCCTCTTGGTATTTTCCTGTAATCAAGGATCTCTTAGTTGGATAACTCCTATTATTAAAACTGACGTTGATTCTGGCTTTGGCGTCTCTCCCAGGAATTGGTTAGATTGGATGAAAAACATAATGTTTCAGAGACTGAAAGAACTGGATTTCTAGTCAGGACTATCAACTCTCTGAATGCTCTTCGTGAAGTAATTTCCAAGGGTCTTGAAAGTGGCCTCCG</genome_strand>
        <mrna_strand>CCCTATTAATGCTCGAAACTGGTGGCGGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAGGTTGTTCGATAACTAGTTGTTGAAAACATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCAGCTGTCTATCTAAAG.....................................................................TGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCAGAGATTTCCAGGCTTATATTTCGTGAAGTAGAAAAAGTCTTGAGCAGGAAAGACACTACACTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATACTTGTGATCCGCAAGATGCAACCGTGCTTGCCTTCTTTTAAAGCAGAATTCACTGCATCCGTTCCTTTAACGAGAATCAGGGACATCGCTCATAGGAATGATATTCCGCATGATCTTAAG...............................................................................................................CAAGAAATCAAACATACTATACAAAACAAGCTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGAATTACCAAACAACCTGGACAATACAGTGAGGCATTTGTACAGCAATTCAAGATTTTCCACAATGAACTAAAAGATTTCTTCAATGCTGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATGAACAGCTGGAATCTATAAGAGAATCACTCGACGGAAGTAGCTTGACAATGCTTTCATCATTCTTGGAGTCCAAAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGGTTAGATTGGATGAAAAACATAATGTTTCAGAGACTGAAAGAACTGGATTTCTAGTCAGGACTATCAACTCTCTGAATGCTCTTCGTGAAGTAATTTCCAAGGGTCTTGAAAGTGGCCTCCC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E344684" ref_strand="+" ref_description="SGN-E344684 [cTOF-14-J8]">
      <seq>ttcacatcgcttggaggctctcacgtatgcagctgtctatctaaagtggataaatacagggcaaattccttgccttgaagatgggggtcaccatcgaccaaatagacatgcagagatttccaggcttatatttcgtgaagtagaaaaagtcttgagcaggaaagacactacacttcaggaaatacttgtgatccgcaagatgcaaccgtgcttgccttcttttaaagcagaattcactgcatccgttcctttaacgagaatcagggacatcgctcataggaatgatattccgcatgatcttaagcaagaaatcaaacatactatacaaaacaagctccatagaaatgctggccctgaagatctagtatccacagaagcaatgctcgaaagaattaccaaacaacctggacaatacagtgaggcatttgtagagcaattcaagattttccacaatgaactaaaagatttcttcaatgctgggagtcttgatgaacagctggaatctataagagaatcactcgacggaagtagcttgacaatgctttcatcattcttggagtccaaaaaggaattggttagattggatgaaaaacataatgtttcagagactgaaagaactggatttctagtcaggactatcaactctctgaatgctcttcgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="76506" stop="72648"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="76206" g_stop="76161" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="76160" i_stop="76092" i_length="69">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76091" g_stop="75960" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="178" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="75959" i_stop="75118" i_length="842">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="75117" g_stop="74992" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="179" r_stop="304" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="74991" i_stop="74881" i_length="111">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="74880" g_stop="74702" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="305" r_stop="483" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74701" i_stop="74005" i_length="697">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74004" g_stop="73920" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="484" r_stop="568" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="73919" i_stop="73043" i_length="877">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="73042" g_stop="72948" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="569" r_stop="663" r_length="95" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E344684" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>663</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E344684" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="76206" e_stop="76161"/>
          <exon e_start="76091" e_stop="75960"/>
          <exon e_start="75117" e_stop="74992"/>
          <exon e_start="74880" e_stop="74702"/>
          <exon e_start="74004" e_stop="73920"/>
          <exon e_start="73042" e_stop="72948"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTCACATCGCTTGGAGGCTCTCACGTATGCAGCTGTCTATCTAAAGGTCTCGTATATTTTTAGATGACTTGCTTGATTCATTTCTATCTCTACTGAATATTACTCTTGGGTGCAGTGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCAGAGATTTCCAGGCTTATATTTCGTGAAGTAGAAAAAGTCTTGAGCAGGAAAGACACTACACTTCAGGTGTTCAACCGTTAAGTGCACCTCATTACGCTTATTTTAATTTTTGTTATGTCTTTCGATTCTGGAACATGTTGGTTGCTCTTGAGAAATTAATGTTGATCCGTTGAACTGGTTCAATTCGTTCTGCAAATTCTTATTCGATTTGTTAAGTGGTGGTACTATATGGTAACAATAAGTCATAGGTAACTGGAAATCTCAACAAGGTAGAGGGGAAGCCCATTATCTGCCGAGTTTCGAACTGTGCCTTTTGTCCCTCAGGAATTTCTCGGTTATAAAAAATGTGACTGGAAATCACACAAATGTAACTTCAGTTTAGACGCAACAGTAGATATTGATCTCTTTAGTATTTTGTTAGGAAGAATTCAGTTGATCTATGTTTTATTCCTTGAATTTTTATTTAGAGCACTGCTCTGAAGAGAAAATGTTATTGCTTCTACAATTGAGCTAATTCTGTGGTTCAGTTTTTTTTCTTCTTGATGGTAAAATCAAATATGCTTTTCTAATGAAGAAGGGTCTGAACTTCTGACTGCTTTTCTTTCTTAAATCTCATTAATATAGTTAGAAAGTTCCGTCGGCAAAGTAACAATTGGTCAATATAAGCTCTTGCTTCAAATATTATTAGACCATACATCTGCTGTCTGTAATATGATTATGAGATTTAAAGCTTTTGAGTTGAAATGCAAACAAAAAGGTAACTTGGGAACATGATACAGGAAGGAAAGGGAGTTAGAAAAATCATCACTCTGAACTTTGTGGATATGAGTCAACCGTTATCTTGTTCTCGAGCTTTTCCTTACCCAGTTTTGAGTGGCTTAGAAAAGTTTTCTTTTCATTATATGCAGGAAATACTTGTGATCCGCAAGATGCAACCGTGCTTGCCTTCTTTTAAAGCAGAATTCACTGCATCCGTTCCTTTAACGAGAATCAGGGACATCGCTCATAGGAATGATATTCCGCATGATCTTAAGGTTGTATACTACCAAAATACTTATTTTTAATTTTTCCTTGCATTCTCAATATTTTCATGTTTTTTACGTAATATATTTGTCCTTCTTACTATTAAAATAACCTTACTTCAGCAAGAAATCAAACATACTATACAAAACAAGCTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGAATTACCAAACAACCTGGACAATACAGTGAGGCATTTGTAGAGCAATTCAAGATTTTCCACAATGAACTAAAAGATTTCTTCAATGCTGGGAGGTATGACCTTCATCTCTTACTTGTTTCAAAATATTTGATTTCACAAAAAGTCAGTCCTATTATGGGATAAAAAGGAGATAAGTTTAGTAGATCGACTAATCAAGCTTCTCCGTAGCATGCATTGGTCCAGATCCATTACTTTATAAAATACGCTTCTTCACTTGCTAGATAATAGTGTCTCACCAGTATGTTGTTCCTCAATTTCTTCCTGAATTGTTTTTCTCTACAACAATGTTTTTTCTTTCCTATATTAAATTTTGCTACTTTGCAGTACCCTCACTTTATTAATTGAGAGGTATCTAGACATGACATGTCTGAGAGATCAGTTGGCTCGTGATGTATGAACTTCACTGTTTGCTATCATACGTGCAAATGTGGTTCTCTCCCAAGGAGAAAAAAGTAGATTGATTGCATTGTTATAGAGTCGTTTAAGGATATTGTTAAGTAACTTTTAGTCTGATTAAATGTGCTCTTTGACAGTGAAGAAAAATGATTTGGGTGCATGTTATAGAATTTTCTCGTCCTTAGTAATGGGTCACCCTTCAAGGGATATGTTTCTCCAGTACGTAATTCCCAATCATGAACGTCCGTATGATTTACACGGAATTAATTAGGTGCAATATGTTCCTACAAAAATGCTTACACACTGGAAAATGAAATTTGCTTGAAATAACTTCTTTCTGTTCTGTCTATTCAGTCTTGATGAACAGCTGGAATCTATAAGAGAATCACTCGACGGAAGTAGCTTGACAATGCTTTCATCATTCTTGGAGTCCAAAAAGGTCAGTGTATTTGTTTTGGTGATAGCTCTACCTAAGAGAAGCTCCAAAGTTTTTACTAATGCGATGAGATTTTTAGCAATAGCTGTGTGTTCTTTGATATTATGAATGTAGGTTAAACTGTTAGTTAGGTATTTATGTACATAAATTTGACTTAGATGTAATATAGTGAAGGTTTACGAGCTACTCGGGGCTTCTTTCATCTTTCTCAATTCATATGGGTCACTGACTCTGATCCGTACCCACTCTTCAACTATCTCTCTGCTCCAATTATCCTCTTCAGCCTATTCTCTGTCTCTCTACTTCAAACCCACTATCTTCTAAACAAAAGGAAAAAGGTATAAAAGAAAAACAAGTAAAAAAGGAAAATCTTTCACCCACATGTAAACCTAGAATCTGTTTACTCATGCGGCATACAAGAAGGTGTGGGAGAATAGAGTGTCCCTCACGATTGTGCAAGAATTTCTAAAAGAGTTTTCAGTGTCATGGGTGACGCCATCGATAACCTTAAGGTTTTGGGTTCGATGCTTAGATTATATCAAAATATTAAAGCAAGAAATGTATGAATAGTGATTCTCGGCAGTTTGGTGTCTTACCTTCAGGATTACTCGGCAGTCTCAGGCTATGATTGATACCATTTTCTTACTAAGTGACTGAAAAAAGGAAACAAAAAAATATTTTTCTTACGGAGGGGTAAAAATGTTATCTGGTTCACTTGCGATGAAATGCATCTTTTGCTTTCTATAGACCCTATGTCTCCTCAAGAGATAGCATATACGTATTTTGGCCTCTTGGTATTTTCCTGTAATCAAGGATCTCTTAGTTGGATAACTCCTATTATTAAAACTGACGTTGATTCTGGCTTTGGCGTCTCTCCCAGGAATTGGTTAGATTGGATGAAAAACATAATGTTTCAGAGACTGAAAGAACTGGATTTCTAGTCAGGACTATCAACTCTCTGAATGCTCTTCGTGA</genome_strand>
        <mrna_strand>TTCACATCGCTTGGAGGCTCTCACGTATGCAGCTGTCTATCTAAAG.....................................................................TGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCAGAGATTTCCAGGCTTATATTTCGTGAAGTAGAAAAAGTCTTGAGCAGGAAAGACACTACACTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATACTTGTGATCCGCAAGATGCAACCGTGCTTGCCTTCTTTTAAAGCAGAATTCACTGCATCCGTTCCTTTAACGAGAATCAGGGACATCGCTCATAGGAATGATATTCCGCATGATCTTAAG...............................................................................................................CAAGAAATCAAACATACTATACAAAACAAGCTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGAATTACCAAACAACCTGGACAATACAGTGAGGCATTTGTAGAGCAATTCAAGATTTTCCACAATGAACTAAAAGATTTCTTCAATGCTGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATGAACAGCTGGAATCTATAAGAGAATCACTCGACGGAAGTAGCTTGACAATGCTTTCATCATTCTTGGAGTCCAAAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGGTTAGATTGGATGAAAAACATAATGTTTCAGAGACTGAAAGAACTGGATTTCTAGTCAGGACTATCAACTCTCTGAATGCTCTTCGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E736262" ref_strand="+" ref_description="SGN-E736262 [LC04DH03]">
      <seq>cctattactagccaggcagttgttcctgacgtagtaacaagtccatttgtggagcaatggcaagggagggctgcatcttttgtacgttcaaacgaccagctggattctgataaaaataggaagtgggacacatcaggtctcaccggaatttccctaaagcttgttgaaggtgataagaatgctcgaaactggtggcggaagcttgaggttgttcgagaactagttgttgaaaacatggatagttcacatcgcttggaggctctcacgtatgcagctgtctatctaaagtggataaatacagggcaaattccttgccttgaagatgggggtcaccatcgaccaaatagacatgcagagatttccaggcttatatttcgtgaagtagaaaaagtcttgagcaggaaagacactacacttcaggaaatacttgtgatccgcaagatgcaaccgtgcttgccttcttttaaagcagaattcactgcatccgttcctttaacgagaatcagggacatcgctcataggaatgatattccgcatgatcttaagcaagaaatcaaacatactatacaaaacaagctccatagaaatgctggccctgaagatctagtatccacagaagcaatgctcgaaagaattaccaaacaacctggacaatacagtgaggcatttgtagagcaattcaagattttccacaatgaactaaaagatttcttcaatgctgggagtcttgatgaacagctggaatctataagagaatcactcgacggaagtagcttgacaatgctttcatcattcttggagtccaaaaaggaattggttagattggatgaaaaacataatgtttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="78129" stop="72708"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77830" g_stop="77630" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="201" r_length="201" r_score="0.990"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77629" i_stop="76248" i_length="1382">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76247" g_stop="76161" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="202" r_stop="288" r_length="87" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76160" i_stop="76092" i_length="69">
            <donor d_prob="0.964" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76091" g_stop="75960" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="289" r_stop="420" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="75959" i_stop="75118" i_length="842">
            <donor d_prob="0.981" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="75117" g_stop="74992" g_length="126"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="546" r_length="126" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="74991" i_stop="74881" i_length="111">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.897" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="74880" g_stop="74702" g_length="179"/>
          <reference_exon_boundary r_type="cDNA" r_start="547" r_stop="725" r_length="179" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="74701" i_stop="74005" i_length="697">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="74004" g_stop="73920" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="726" r_stop="810" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="73919" i_stop="73043" i_length="877">
            <donor d_prob="0.882" d_score="1.00"/>
            <acceptor a_prob="0.955" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="73042" g_stop="73008" g_length="35"/>
          <reference_exon_boundary r_type="cDNA" r_start="811" r_stop="845" r_length="35" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E736262" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>845</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E736262" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77830" e_stop="77630"/>
          <exon e_start="76247" e_stop="76161"/>
          <exon e_start="76091" e_stop="75960"/>
          <exon e_start="75117" e_stop="74992"/>
          <exon e_start="74880" e_stop="74702"/>
          <exon e_start="74004" e_stop="73920"/>
          <exon e_start="73042" e_stop="73008"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATTACTAGCCAGGCAGTTGTTCCTGACGTAGTAACAAGTCCATTTGTGGAGCAATGGCAAGGGAGGGCTGCATCTTTTGTACGTTCAAACGACCAGCTGGATTCTGATAAAAATAGGAAGTGGGACACATCAGGTCTCACCGGAATTTCCCTAAAGCTTGTTGAAGGTGATAAGAATGCTCGAAACTGGTGGCGGAAGGTGAGAAGATAGATTAGATCTCGTCTTGATGGCATGTTTGCATTCTGGAAATTGACTGTGCCATAAAAGAATTACTTCTGTGCAAGATAGCATCACAGGGCATCTCTGCAATTTATTTTCTATAATTCATCAATCTGCATTGTTGGTATCCTCACTATTGCAAGAGTGTCTTCTTTTAAGCTCACTCATCACTTGTGTGTGAAGTCCTCCAAGTGTGTCTCCTTTTAGCTATGGGGATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTGCTAACACTCATGATGATTAATGAGTGGAGAAACGGTATGAAGGAAGAGATGGAATGAGCAAAGAGGGAAGAGAATAACTTTCCTTGCGTTCTGTGTAAGATCAAGTGTGGCCACAGAGGAAAGTTGGAGAGAGATGTTTCCAGGAGATTGAGAGATATTTTTTGTAGAGCGAGCACTTGGTTCTTATGCAAATTGACTGATGAACTACAATATTCTCTTCTTTCAGTTTTATTTGTTGCTAAGTAGTCCATGGAGAAATTGATTGCTCTCCATTTGGTGGTCTACTATACTACAAGTTGCTTTTCATCCATCAGATTAACAGGCCAAAACATATCTTGAGATAGCTATGTGAAAGTGCATTTTCTTGTGCTTAGATGAAGCTTGAATTTGTTGTTCAGCTATATCAATAAGGATGGGAGAGCCGTTACTTCATATTAGATTTAGATTATTGTTATCCTTTGCCTTATTTAAGATGTTTTTTTAATGCCAGTACAATGATATATCTTGAGATAGTTACATAGTGGTGCCTGTTAGTGTGGTTTGGCGAAGTTGTTTCTCATTGATACCAATAAGGATGATAAAACTATCATTTACTGTTAGATTTAGGTTATTGTTACTGGTTCTCATTAGAGATACAGTATGGAATAGCAGCGGCTCAAACAGAGAGACAGAGGAAGCATGAGCTTTTAAAAGCTAAAACTTCCTAGCATAATGCTAATGAGTTGGCTGTATGTGAACTCATAAGTCATAGCAAAACTATTGGCGTCTATTTGAAATATTCCCCTTTTCTCATTCTTTTAACTTTACTAATTTGATTATATTTAAAGATAGTTTTAGTTCTTCTCAGTTGGAGATAACTAAATATACTTTGGAACAACGGTAGATTGTGTGATTAAAAAATAGCTGGTTGAAGAGAGGTAACACCAGCACTAAAGCATGAGAAGTGATGTTATTCTCTATTAATTGCAATTCTTGTGGTTTGTTACTTTTCCATTTCGTGAAAAGGCTCTAACTTCAGAATTGTCTACATCTCTTTATAATTAACTGTCTCCTTTTTTTTTTACTGGTTTTAGCTTGAGGTTGTTCGAGAACTAGTTGTTGAAAACATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCAGCTGTCTATCTAAAGGTCTCGTATATTTTTAGATGACTTGCTTGATTCATTTCTATCTCTACTGAATATTACTCTTGGGTGCAGTGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCAGAGATTTCCAGGCTTATATTTCGTGAAGTAGAAAAAGTCTTGAGCAGGAAAGACACTACACTTCAGGTGTTCAACCGTTAAGTGCACCTCATTACGCTTATTTTAATTTTTGTTATGTCTTTCGATTCTGGAACATGTTGGTTGCTCTTGAGAAATTAATGTTGATCCGTTGAACTGGTTCAATTCGTTCTGCAAATTCTTATTCGATTTGTTAAGTGGTGGTACTATATGGTAACAATAAGTCATAGGTAACTGGAAATCTCAACAAGGTAGAGGGGAAGCCCATTATCTGCCGAGTTTCGAACTGTGCCTTTTGTCCCTCAGGAATTTCTCGGTTATAAAAAATGTGACTGGAAATCACACAAATGTAACTTCAGTTTAGACGCAACAGTAGATATTGATCTCTTTAGTATTTTGTTAGGAAGAATTCAGTTGATCTATGTTTTATTCCTTGAATTTTTATTTAGAGCACTGCTCTGAAGAGAAAATGTTATTGCTTCTACAATTGAGCTAATTCTGTGGTTCAGTTTTTTTTCTTCTTGATGGTAAAATCAAATATGCTTTTCTAATGAAGAAGGGTCTGAACTTCTGACTGCTTTTCTTTCTTAAATCTCATTAATATAGTTAGAAAGTTCCGTCGGCAAAGTAACAATTGGTCAATATAAGCTCTTGCTTCAAATATTATTAGACCATACATCTGCTGTCTGTAATATGATTATGAGATTTAAAGCTTTTGAGTTGAAATGCAAACAAAAAGGTAACTTGGGAACATGATACAGGAAGGAAAGGGAGTTAGAAAAATCATCACTCTGAACTTTGTGGATATGAGTCAACCGTTATCTTGTTCTCGAGCTTTTCCTTACCCAGTTTTGAGTGGCTTAGAAAAGTTTTCTTTTCATTATATGCAGGAAATACTTGTGATCCGCAAGATGCAACCGTGCTTGCCTTCTTTTAAAGCAGAATTCACTGCATCCGTTCCTTTAACGAGAATCAGGGACATCGCTCATAGGAATGATATTCCGCATGATCTTAAGGTTGTATACTACCAAAATACTTATTTTTAATTTTTCCTTGCATTCTCAATATTTTCATGTTTTTTACGTAATATATTTGTCCTTCTTACTATTAAAATAACCTTACTTCAGCAAGAAATCAAACATACTATACAAAACAAGCTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGAATTACCAAACAACCTGGACAATACAGTGAGGCATTTGTAGAGCAATTCAAGATTTTCCACAATGAACTAAAAGATTTCTTCAATGCTGGGAGGTATGACCTTCATCTCTTACTTGTTTCAAAATATTTGATTTCACAAAAAGTCAGTCCTATTATGGGATAAAAAGGAGATAAGTTTAGTAGATCGACTAATCAAGCTTCTCCGTAGCATGCATTGGTCCAGATCCATTACTTTATAAAATACGCTTCTTCACTTGCTAGATAATAGTGTCTCACCAGTATGTTGTTCCTCAATTTCTTCCTGAATTGTTTTTCTCTACAACAATGTTTTTTCTTTCCTATATTAAATTTTGCTACTTTGCAGTACCCTCACTTTATTAATTGAGAGGTATCTAGACATGACATGTCTGAGAGATCAGTTGGCTCGTGATGTATGAACTTCACTGTTTGCTATCATACGTGCAAATGTGGTTCTCTCCCAAGGAGAAAAAAGTAGATTGATTGCATTGTTATAGAGTCGTTTAAGGATATTGTTAAGTAACTTTTAGTCTGATTAAATGTGCTCTTTGACAGTGAAGAAAAATGATTTGGGTGCATGTTATAGAATTTTCTCGTCCTTAGTAATGGGTCACCCTTCAAGGGATATGTTTCTCCAGTACGTAATTCCCAATCATGAACGTCCGTATGATTTACACGGAATTAATTAGGTGCAATATGTTCCTACAAAAATGCTTACACACTGGAAAATGAAATTTGCTTGAAATAACTTCTTTCTGTTCTGTCTATTCAGTCTTGATGAACAGCTGGAATCTATAAGAGAATCACTCGACGGAAGTAGCTTGACAATGCTTTCATCATTCTTGGAGTCCAAAAAGGTCAGTGTATTTGTTTTGGTGATAGCTCTACCTAAGAGAAGCTCCAAAGTTTTTACTAATGCGATGAGATTTTTAGCAATAGCTGTGTGTTCTTTGATATTATGAATGTAGGTTAAACTGTTAGTTAGGTATTTATGTACATAAATTTGACTTAGATGTAATATAGTGAAGGTTTACGAGCTACTCGGGGCTTCTTTCATCTTTCTCAATTCATATGGGTCACTGACTCTGATCCGTACCCACTCTTCAACTATCTCTCTGCTCCAATTATCCTCTTCAGCCTATTCTCTGTCTCTCTACTTCAAACCCACTATCTTCTAAACAAAAGGAAAAAGGTATAAAAGAAAAACAAGTAAAAAAGGAAAATCTTTCACCCACATGTAAACCTAGAATCTGTTTACTCATGCGGCATACAAGAAGGTGTGGGAGAATAGAGTGTCCCTCACGATTGTGCAAGAATTTCTAAAAGAGTTTTCAGTGTCATGGGTGACGCCATCGATAACCTTAAGGTTTTGGGTTCGATGCTTAGATTATATCAAAATATTAAAGCAAGAAATGTATGAATAGTGATTCTCGGCAGTTTGGTGTCTTACCTTCAGGATTACTCGGCAGTCTCAGGCTATGATTGATACCATTTTCTTACTAAGTGACTGAAAAAAGGAAACAAAAAAATATTTTTCTTACGGAGGGGTAAAAATGTTATCTGGTTCACTTGCGATGAAATGCATCTTTTGCTTTCTATAGACCCTATGTCTCCTCAAGAGATAGCATATACGTATTTTGGCCTCTTGGTATTTTCCTGTAATCAAGGATCTCTTAGTTGGATAACTCCTATTATTAAAACTGACGTTGATTCTGGCTTTGGCGTCTCTCCCAGGAATTGGTTAGATTGGATGAAAAACATAATGTTTC</genome_strand>
        <mrna_strand>CCTATTACTAGCCAGGCAGTTGTTCCTGACGTAGTAACAAGTCCATTTGTGGAGCAATGGCAAGGGAGGGCTGCATCTTTTGTACGTTCAAACGACCAGCTGGATTCTGATAAAAATAGGAAGTGGGACACATCAGGTCTCACCGGAATTTCCCTAAAGCTTGTTGAAGGTGATAAGAATGCTCGAAACTGGTGGCGGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAGGTTGTTCGAGAACTAGTTGTTGAAAACATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCAGCTGTCTATCTAAAG.....................................................................TGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCAGAGATTTCCAGGCTTATATTTCGTGAAGTAGAAAAAGTCTTGAGCAGGAAAGACACTACACTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATACTTGTGATCCGCAAGATGCAACCGTGCTTGCCTTCTTTTAAAGCAGAATTCACTGCATCCGTTCCTTTAACGAGAATCAGGGACATCGCTCATAGGAATGATATTCCGCATGATCTTAAG...............................................................................................................CAAGAAATCAAACATACTATACAAAACAAGCTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGAATTACCAAACAACCTGGACAATACAGTGAGGCATTTGTAGAGCAATTCAAGATTTTCCACAATGAACTAAAAGATTTCTTCAATGCTGGGAG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTTGATGAACAGCTGGAATCTATAAGAGAATCACTCGACGGAAGTAGCTTGACAATGCTTTCATCATTCTTGGAGTCCAAAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAATTGGTTAGATTGGATGAAAAACATAATGTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E737921" ref_strand="+" ref_description="SGN-E737921 [LC11CH04]">
      <seq>ggagggctgcatcttttgtacgttcaaacgaccagcctggattctgataaaaataggaagtgggacacatcagagtctcaccggaatttccctaaagcttgttgaaggtgataagaatgctcgaaactggtggcggaagcttgaggttgttcgagaactagttgttgaaaacatggatagttcacatcgcttggaggctctcacgtatgcaactgtctatctaaagtggataaatacagggcaaattccttgccttgaagatgggggtcaccatcgaccaaatagacatgcggagatttccaggcttatatttcgtgaaatagaaaaagtcttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="78066" stop="75684"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="77766" g_stop="77630" g_length="137"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="139" r_length="139" r_score="0.971"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="77629" i_stop="76248" i_length="1382">
            <donor d_prob="0.942" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="76247" g_stop="76161" g_length="87"/>
          <reference_exon_boundary r_type="cDNA" r_start="140" r_stop="226" r_length="87" r_score="0.989"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="76160" i_stop="76092" i_length="69">
            <donor d_prob="0.964" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="76091" g_stop="75984" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="334" r_length="108" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E737921" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>332</cumulative_length_of_scored_exons>
        <coverage percentage="0.994" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E737921" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="77766" e_stop="77630"/>
          <exon e_start="76247" e_stop="76161"/>
          <exon e_start="76091" e_stop="75984"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAGGGCTGCATCTTTTGTACGTTCAAACGACCAG-CTGGATTCTGATAAAAATAGGAAGTGGGACACATCAG-GTCTCACCGGAATTTCCCTAAAGCTTGTTGAAGGTGATAAGAATGCTCGAAACTGGTGGCGGAAGGTGAGAAGATAGATTAGATCTCGTCTTGATGGCATGTTTGCATTCTGGAAATTGACTGTGCCATAAAAGAATTACTTCTGTGCAAGATAGCATCACAGGGCATCTCTGCAATTTATTTTCTATAATTCATCAATCTGCATTGTTGGTATCCTCACTATTGCAAGAGTGTCTTCTTTTAAGCTCACTCATCACTTGTGTGTGAAGTCCTCCAAGTGTGTCTCCTTTTAGCTATGGGGATATATATATATATATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATTTGCTAACACTCATGATGATTAATGAGTGGAGAAACGGTATGAAGGAAGAGATGGAATGAGCAAAGAGGGAAGAGAATAACTTTCCTTGCGTTCTGTGTAAGATCAAGTGTGGCCACAGAGGAAAGTTGGAGAGAGATGTTTCCAGGAGATTGAGAGATATTTTTTGTAGAGCGAGCACTTGGTTCTTATGCAAATTGACTGATGAACTACAATATTCTCTTCTTTCAGTTTTATTTGTTGCTAAGTAGTCCATGGAGAAATTGATTGCTCTCCATTTGGTGGTCTACTATACTACAAGTTGCTTTTCATCCATCAGATTAACAGGCCAAAACATATCTTGAGATAGCTATGTGAAAGTGCATTTTCTTGTGCTTAGATGAAGCTTGAATTTGTTGTTCAGCTATATCAATAAGGATGGGAGAGCCGTTACTTCATATTAGATTTAGATTATTGTTATCCTTTGCCTTATTTAAGATGTTTTTTTAATGCCAGTACAATGATATATCTTGAGATAGTTACATAGTGGTGCCTGTTAGTGTGGTTTGGCGAAGTTGTTTCTCATTGATACCAATAAGGATGATAAAACTATCATTTACTGTTAGATTTAGGTTATTGTTACTGGTTCTCATTAGAGATACAGTATGGAATAGCAGCGGCTCAAACAGAGAGACAGAGGAAGCATGAGCTTTTAAAAGCTAAAACTTCCTAGCATAATGCTAATGAGTTGGCTGTATGTGAACTCATAAGTCATAGCAAAACTATTGGCGTCTATTTGAAATATTCCCCTTTTCTCATTCTTTTAACTTTACTAATTTGATTATATTTAAAGATAGTTTTAGTTCTTCTCAGTTGGAGATAACTAAATATACTTTGGAACAACGGTAGATTGTGTGATTAAAAAATAGCTGGTTGAAGAGAGGTAACACCAGCACTAAAGCATGAGAAGTGATGTTATTCTCTATTAATTGCAATTCTTGTGGTTTGTTACTTTTCCATTTCGTGAAAAGGCTCTAACTTCAGAATTGTCTACATCTCTTTATAATTAACTGTCTCCTTTTTTTTTTACTGGTTTTAGCTTGAGGTTGTTCGAGAACTAGTTGTTGAAAACATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCAGCTGTCTATCTAAAGGTCTCGTATATTTTTAGATGACTTGCTTGATTCATTTCTATCTCTACTGAATATTACTCTTGGGTGCAGTGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCAGAGATTTCCAGGCTTATATTTCGTGAAGTAGAAAAAGTCTTG</genome_strand>
        <mrna_strand>GGAGGGCTGCATCTTTTGTACGTTCAAACGACCAGCCTGGATTCTGATAAAAATAGGAAGTGGGACACATCAGAGTCTCACCGGAATTTCCCTAAAGCTTGTTGAAGGTGATAAGAATGCTCGAAACTGGTGGCGGAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGAGGTTGTTCGAGAACTAGTTGTTGAAAACATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCAACTGTCTATCTAAAG.....................................................................TGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCGGAGATTTCCAGGCTTATATTTCGTGAAATAGAAAAAGTCTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390928" ref_strand="+" ref_description="SGN-E390928 [TUS-46-F12](-)">
      <seq>taatcacatcaagtccatgttcatggacntatttggtgcgggtactgatacaaccacaagcacattggaatgggcaatggcagaattgcttaaacaacctgagataataaaaaaagctcaagttgaacttgctgaaatcattgggaaaggaaaattaatagaagaagctgatgtttttcgactcccttacttgcaatgcattatcaaagaaacattaagattgcatccaccggttccgctcttagttccgcgcaaagtagaccaagatgttgaattgtgtgactacatcatcccaaagggctcacaggtactagttaatgtgtgggcgattggtcgagattttactttttggaaggatcctttagagtttaaacctgagagatttttgaatttggatctggacatgcgaggacaagattttgagttgattccatttggtgctggacgaagaatatgccctgggttgccactagcattgaggatgattccagtaatgttgggctcactgttgaattcattcaattggaaacttgatgcaggtattgagccacaagaattagacatggaggagaagtttggtattaccttagccaaagctcatcctttgcgagctatcccctctcctctttgatcgatgttgcattgcctagtcgataaatatttatatgtatttgatatttacgctgaagcaagtattttaatctaaataatcatataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="84540" stop="82891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84240" g_stop="84216" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84215" i_stop="84106" i_length="110">
            <donor d_prob="0.994" d_score="0.00"/>
            <acceptor a_prob="0.999" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84105" g_stop="83824" g_length="282"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="307" r_length="282" r_score="0.996"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="83823" i_stop="83603" i_length="221">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.626" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="83602" g_stop="83182" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="308" r_stop="728" r_length="421" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E390928" ref_strand="+">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>728</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390928" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84240" e_stop="84216"/>
          <exon e_start="84105" e_stop="83824"/>
          <exon e_start="83602" e_stop="83182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAATCACATCAAGTCCATGTTCATGGTTCGTATTATTTATCATGAGCTTATGTTATATTATTATAATTTATGAATTTTTTTTATTATTATTGCAATATATGGTTATTTATTTTGATGTACAAATTAATGTTATAGGACCTATTTGGTGCGGGTACTGATACAACCACAAGCACATTGGAATGGGCAATGGCAGAATTGCTTAAACAACCTGAGATAATAAAAAAAGCTCAAGTTGAACTTGCTGAAATCATTGGGAAAGGAAAATTAATAGAAGAAGCTGATGTTTTTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGATTGCATCCACCGGTTCCGCTCTTAGTTCCGCGCAAAGTAGACCAAGATGTTGAATTGTGTGACTACATCATCCCAAAGGGCTCACAGGTATGTATGTGTGGTAAATAAAGTTATTTGACGAAAATAATATGAATAGTGTACTAAAGAGGACCCAAAAGAAAATTTATAATTATTTTTTAAAAAAATAAAATAAATTAAAATTTGGTTAGAGTTGGATGGATTAGGTTTGACCTGTTGTTTAGTACTGAATCTTATTGAGCTCTTTTAACCAATCCAAACATAAACTAACTCATGTAATTTGAGTCCAGGTACTAGTTAATGTGTGGGCGATTGGTCGAGATTTTACTTTTTGGAAGGATCCTTTAGAGTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTGTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATCTAAATAATCATATATATGTATATTG</genome_strand>
        <mrna_strand>TAATCACATCAAGTCCATGTTCATG..............................................................................................................GACNTATTTGGTGCGGGTACTGATACAACCACAAGCACATTGGAATGGGCAATGGCAGAATTGCTTAAACAACCTGAGATAATAAAAAAAGCTCAAGTTGAACTTGCTGAAATCATTGGGAAAGGAAAATTAATAGAAGAAGCTGATGTTTTTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGATTGCATCCACCGGTTCCGCTCTTAGTTCCGCGCAAAGTAGACCAAGATGTTGAATTGTGTGACTACATCATCCCAAAGGGCTCACAG.............................................................................................................................................................................................................................GTACTAGTTAATGTGTGGGCGATTGGTCGAGATTTTACTTTTTGGAAGGATCCTTTAGAGTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTGTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATCTAAATAATCATATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390927" ref_strand="+" ref_description="SGN-E390927 [TUS-46-F10](-)">
      <seq>gataataaaaaaagctcaagttgaactgctgnaaatcatcgggaaaggaaaattaatagaagaagctgatgttnttcgactcccttacttgcaatgcattatcaaagaaacattaagattgcatccaccggttccgctcttagttccgcgcaaagtagaccaagatgttgaattgtgtgactacatcatcccaaagggctcacaggtactagttaatgtgtgggcgattggtcgagattttactttttggaaggatcctttagagtttaaacctgagagatttttgaatttggatctggacatgcgaggacaagattttgagttgattccatttggtgctggacgaagaatatgccctgggttgccactagcattgaggatgattccagtaatgttgggctcactgttgaattcattcaattggaaacttgatgcaggtattgagccacaagaattagacatggaggagaagtttggtattaccttagccaaagctcatcctttgcgagctatcccctctcctctttgatcgatgttgcattgcctagtcgataaatatttatatgtatttgatatttacgctgaagcaagtattttaatctaaataatcatataaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="84328" stop="82891"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84028" g_stop="83824" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="205" r_length="205" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83823" i_stop="83603" i_length="221">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.626" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83602" g_stop="83182" g_length="421"/>
          <reference_exon_boundary r_type="cDNA" r_start="206" r_stop="626" r_length="421" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E390927" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>626</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390927" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84028" e_stop="83824"/>
          <exon e_start="83602" e_stop="83182"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATAATAAAAAAAGCTCAAGTTGAACTTGCTG-AAATCATTGGGAAAGGAAAATTAATAGAAGAAGCTGATGTTTTTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGATTGCATCCACCGGTTCCGCTCTTAGTTCCGCGCAAAGTAGACCAAGATGTTGAATTGTGTGACTACATCATCCCAAAGGGCTCACAGGTATGTATGTGTGGTAAATAAAGTTATTTGACGAAAATAATATGAATAGTGTACTAAAGAGGACCCAAAAGAAAATTTATAATTATTTTTTAAAAAAATAAAATAAATTAAAATTTGGTTAGAGTTGGATGGATTAGGTTTGACCTGTTGTTTAGTACTGAATCTTATTGAGCTCTTTTAACCAATCCAAACATAAACTAACTCATGTAATTTGAGTCCAGGTACTAGTTAATGTGTGGGCGATTGGTCGAGATTTTACTTTTTGGAAGGATCCTTTAGAGTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTGTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATCTAAATAATCATATATATGTATATTG</genome_strand>
        <mrna_strand>GATAATAAAAAAAGCTCAAGTTGAAC-TGCTGNAAATCATCGGGAAAGGAAAATTAATAGAAGAAGCTGATGTTNTTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGATTGCATCCACCGGTTCCGCTCTTAGTTCCGCGCAAAGTAGACCAAGATGTTGAATTGTGTGACTACATCATCCCAAAGGGCTCACAG.............................................................................................................................................................................................................................GTACTAGTTAATGTGTGGGCGATTGGTCGAGATTTTACTTTTTGGAAGGATCCTTTAGAGTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTGTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATCTAAATAATCATATAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E695168" ref_strand="+" ref_description="SGN-E695168 [LH_Ea05N06](-)">
      <seq>gtttaaacctgagagatttttgaatttggatctggacatgcgaggacaagattttgagttgattccatttggtgctggacgaagaatatgccctgggttgccactagcattgagaatgattccattaatgttgggctcactcttgaattcattcaattggaaacttgatgcaggtattgagccacaagaattagacatggaggagaagtttggtattaccttagccaaagctcatcctttgcgagctatcccctctcctctttgatcgatgttgcattgcctagtcgataaatatttagatgtatttgatatttacgctgaagcaagtattttaataaagataatcatatatatatatatattgcctaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="83843" stop="82874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83543" g_stop="83190" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="368" polyA_stop="387"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E695168" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="0.915" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E695168" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83543" e_stop="83190"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTGTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATCTAAATAATCATATATAT</genome_strand>
        <mrna_strand>GTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGAATGATTCCATTAATGTTGGGCTCACTCTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTAGATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATAAAGATAATCATATATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E691328" ref_strand="+" ref_description="SGN-E691328 [LH_Ea05N06]">
      <seq>ttttaaacctgagagatttttgaatttggatctggacatgcgaggacaagattttgagttgattccatttggtgctggacgaagaatatgccctgggttgccactagcattgagaatgattccattaatgttgggctcactcttgaattcattcaattggaaacttgatgcaggtattgagccacaagaattagacatggaggagaagtttggtattaccttagccaaagctcatcctttgcgagctatcccctctcctctttgatcgatgttgcattgcctagtcgataaatatttatatgtatttgatatttacgctgaagcaagtattttaatctaaataatcatatatatatatatattgcctataaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="83842" stop="82874"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="83543" g_stop="83190" g_length="354"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="354" r_length="354" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="368" polyA_stop="382"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E691328" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>354</cumulative_length_of_scored_exons>
        <coverage percentage="0.927" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E691328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="83543" e_stop="83190"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTGTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATCTAAATAATCATATATAT</genome_strand>
        <mrna_strand>TTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGAATGATTCCATTAATGTTGGGCTCACTCTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATCTAAATAATCATATATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E413638" ref_strand="-" ref_description="SGN-E413638 [STM-18-O11]">
      <seq>ataataaaaaaagctcaagttgaactcacagaaaccattgggaaaggaaaatcaatagaagaagctgatgtttctcgactcccttacttgcaatgcattatcaaagaaacattaagactgcacccaccagttccgttcttacttccgcgcaaagtggaacaacatgttgaattgtgtgactacatcattcccaagggctcacaggtactagttaatgtgtgggcaattggtcgagattctactttttggaaggatcctgtagtgtttaaacctgagagatttttgagtttggatttagatatgcgaggacaagattttgagttgattccatttggtgcgggacgaagaatatgccctggcttgccactagcattgaggatgattccaagtaatgttgggttcactcttgaattcattcaattggaaacttgaagcagacattgagccagaagaattagacatggaggagaagtttggtctcaccttagccaaagctcgtcctttgcgagctatcccctctcctctttgatgttgcattgcctagtcaataaatacttatttgtatttgatatttacaatgaaccaagtatttatgtcttaataagcagaacacttcatcatgactaaaaaaaagatag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="84327" stop="82906"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84027" g_stop="83824" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="0.922"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="83823" i_stop="83603" i_length="221">
            <donor d_prob="0.999" d_score="0.90"/>
            <acceptor a_prob="0.626" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="83602" g_stop="83222" g_length="381"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="582" r_length="378" r_score="0.921"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E413638" ref_strand="-">
        <total_alignment_score>0.921</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.917" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E413638" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="84027" e_stop="83824"/>
          <exon e_start="83602" e_stop="83222"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATAATAAAAAAAGCTCAAGTTGAACTTGCTGAAATCATTGGGAAAGGAAAATTAATAGAAGAAGCTGATGTTTTTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGATTGCATCCACCGGTTCCGCTCTTAGTTCCGCGCAAAGTAGACCAAGATGTTGAATTGTGTGACTACATCATCCCAAAGGGCTCACAGGTATGTATGTGTGGTAAATAAAGTTATTTGACGAAAATAATATGAATAGTGTACTAAAGAGGACCCAAAAGAAAATTTATAATTATTTTTTAAAAAAATAAAATAAATTAAAATTTGGTTAGAGTTGGATGGATTAGGTTTGACCTGTTGTTTAGTACTGAATCTTATTGAGCTCTTTTAACCAATCCAAACATAAACTAACTCATGTAATTTGAGTCCAGGTACTAGTTAATGTGTGGGCGATTGGTCGAGATTTTACTTTTTGGAAGGATCCTTTAGAGTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGGATGATTCC-AGTAATGTTGGGCTCACTGTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAA</genome_strand>
        <mrna_strand>ATAATAAAAAAAGCTCAAGTTGAACTCACAGAAACCATTGGGAAAGGAAAATCAATAGAAGAAGCTGATGTTTCTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGACTGCACCCACCAGTTCCGTTCTTACTTCCGCGCAAAGTGGAACAACATGTTGAATTGTGTGACTACATCATTCCCAAGGGCTCACAG.............................................................................................................................................................................................................................GTACTAGTTAATGTGTGGGCAATTGGTCGAGATTCTACTTTTTGGAAGGATCCTGTAGTGTTTAAACCTGAGAGATTTTTGAGTTTGGATTTAGATATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCGGGACGAAGAATATGCCCTGGCTTGCCACTAGCATTGAGGATGATTCCAAGTAATGTTGGGTTCACTCTTGAATTCATTCAATTGGAAACTTGAAGCAGACATTGAGCCAGAAGAATTAGACATGGAGGAGAAGTTTGGTCTCACCTTAGCCAAAGCTCGTCCTTTGCGAGCTATCCCCTCTCCTC-TT--T-GATGTTGCATTGCCTAGTCAATAAATACTTATTTGTATTTGATATTTACAATGAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E335463" ref_strand="+" ref_description="SGN-E335463 [cTOE-2-C13]">
      <seq>acaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaggatttggctgatcctttttcagattcaaaggtagagttgaaggaagttatatggggtatcatggctgaggtagggaagcctaatttagtagattttttccccatacttgaaaaaattgatcttcaaggaataagacgtcgcgctatcattcattttggtaagttgtttaaactttttgatgatttgatcaacgaacgattggaggaaaagaaaagaccaggattcatggaaaagagcgatgttcttgaaatatttctcaatattactgaaaaaaatcctcaagagattgatcataatcacatcaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85181" stop="83927"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84881" g_stop="84227" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E335463" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E335463" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84881" e_stop="84227"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTGGTAAGTTGTTTAAACTTTTTGATGATTTGATCAACGAACGATTGGAGGAAAAGAAAAGACCAGGATTCATGGAAAAGAGCGATGTTCTTGAAATATTTCTCAATATTACTGAAAAAAATCCTCAAGAGATTGATCATAATCACATCAAGT</genome_strand>
        <mrna_strand>ACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTGGTAAGTTGTTTAAACTTTTTGATGATTTGATCAACGAACGATTGGAGGAAAAGAAAAGACCAGGATTCATGGAAAAGAGCGATGTTCTTGAAATATTTCTCAATATTACTGAAAAAAATCCTCAAGAGATTGATCATAATCACATCAAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E278924" ref_strand="+" ref_description="SGN-E278924 [cLER-2-C12]">
      <seq>taaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaggatttggctgatcctttttcagattcaaaggtagagttgaaggaagttatatggggtatcatggctgaggtagggaagcctaatttagtagattttttccccatacttgaaaaaattgatcttcaaggaataagacgtcgcgctatcattcattttggtaagttgtttaaactttttgatgatttgatcaacgaacgattggaggaaaagaaaagaccaggattcatggaaaagagcgatgttcttgaaatatttctcaatattactgaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85137" stop="83961"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84837" g_stop="84261" g_length="577"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="577" r_length="577" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E278924" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E278924" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84837" e_stop="84261"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTGGTAAGTTGTTTAAACTTTTTGATGATTTGATCAACGAACGATTGGAGGAAAAGAAAAGACCAGGATTCATGGAAAAGAGCGATGTTCTTGAAATATTTCTCAATATTACTGAAAAA</genome_strand>
        <mrna_strand>TAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTGGTAAGTTGTTTAAACTTTTTGATGATTTGATCAACGAACGATTGGAGGAAAAGAAAAGACCAGGATTCATGGAAAAGAGCGATGTTCTTGAAATATTTCTCAATATTACTGAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472912" ref_strand="+" ref_description="SGN-E472912 [cSTB-30-I6]">
      <seq>caaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgttcctaatgctctgcaagcacacaaccattacaaattctctgtgggatggcttcctgtttgtcctcaatggcgaacgcttcgcagaatattgaacataaatatcttctctcccaataggcttgatgcaaagaacatctaaggtctcaaaaggtgaaagaattgattgcttattgtgacaaatttagtcaacaaggtgaagctttggatgtaggtcaagttgctttcaagactaatctcaacttgttgtcaaacacacttttctccaaggatttggctgaccctttttcagattcgaaggtagagttgaaggaagttatatggggtgtcatggctgaggtagggaagcctaatctagtagattttttccccatacttgaaaagattgatcttcaaggaataagacgtcgcgcaatcattcattttggtaagttgtttaaacttttcgatggtttgatcaatgagcgattggaggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85159" stop="84026"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84859" g_stop="84326" g_length="534"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="533" r_length="533" r_score="0.938"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E472912" ref_strand="+">
        <total_alignment_score>0.938</total_alignment_score>
        <cumulative_length_of_scored_exons>534</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472912" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84859" e_stop="84326"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTGGTAAGTTGTTTAAACTTTTTGATGATTTGATCAACGAACGATTGGAGGAAA</genome_strand>
        <mrna_strand>CAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGTTCCTAATGCTCTGCAAGCACACAACCATTACAAATTCTCTGTGGGATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGCAGAATATTGAACATAAATATCTTCTCTCCCAATAGGCTTGATGCAAA-GAACATCTAAGGTCTCAAAAGGTGAAAGAATTGATTGCTTATTGTGACAAATTTAGTCAACAAGGTGAAGCTTTGGATGTAGGTCAAGTTGCTTTCAAGACTAATCTCAACTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGACCCTTTTTCAGATTCGAAGGTAGAGTTGAAGGAAGTTATATGGGGTGTCATGGCTGAGGTAGGGAAGCCTAATCTAGTAGATTTTTTCCCCATACTTGAAAAGATTGATCTTCAAGGAATAAGACGTCGCGCAATCATTCATTTTGGTAAGTTGTTTAAACTTTTCGATGGTTTGATCAATGAGCGATTGGAGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E301544" ref_strand="+" ref_description="SGN-E301544 [cLEW-23-O2]">
      <seq>ttattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaggatttggctgatcctttttcagattcaaaggtagagttgaaggaagttatatggggtatcatggctgaggtagggaagcctaatttagtagattttttccccatacttgaaaaaattgatcttcaaggaataagacgtcgcgctatcattcattttg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85282" stop="84077"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84982" g_stop="84377" g_length="606"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="606" r_length="606" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E301544" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>606</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E301544" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84982" e_stop="84377"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTG</genome_strand>
        <mrna_strand>TTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E404114" ref_strand="+" ref_description="SGN-E404114 [PPC-12-P7]">
      <seq>caattattggaaatcttcacttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaaattaggacaaataacaacagtggtgatttcttcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgttcctaatgctcttcatgcacacaaccattacaaattctctgtgggatggcttcctgtttgtcctcaatggcgaacgcttcgtagaatattgaacataaatatcttctctcccaataggcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatttagtcaacaaggtgaagctttggatgtaggtcaagttgctttcaagactaatctcaacttgttgtcaaacacacttttctccaaggatttggctgaccctttttcagattcaaaggtagagttgaaggaagttatctggggtgtcatggctgaggtanggaagcctaatctagtagatttttttcccatacttgaaaagattgatcttcaaggaataagacgtcgtgcaatcattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85285" stop="84082"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84985" g_stop="84382" g_length="604"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="604" r_length="604" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E404114" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>604</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E404114" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84985" e_stop="84382"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCA</genome_strand>
        <mrna_strand>CAATTATTGGAAATCTTCACTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAATTAGGACAAATAACAACAGTGGTGATTTCTTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGTTCCTAATGCTCTTCATGCACACAACCATTACAAATTCTCTGTGGGATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGTAGAATATTGAACATAAATATCTTCTCTCCCAATAGGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATTTAGTCAACAAGGTGAAGCTTTGGATGTAGGTCAAGTTGCTTTCAAGACTAATCTCAACTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGACCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATCTGGGGTGTCATGGCTGAGGTANGGAAGCCTAATCTAGTAGATTTTTTTCCCATACTTGAAAAGATTGATCTTCAAGGAATAAGACGTCGTGCAATCATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291872" ref_strand="+" ref_description="SGN-E291872 [cLET-7-N15]">
      <seq>atatgtagcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaagatttggctgatcctttttcagattcaaaggtagagttgaaggaagttatatggggtatcatggctgaggtagggaagcctaatttagtagattttttccccatacttgaaaaaattgat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85334" stop="84114"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85034" g_stop="84414" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="621" r_length="621" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E291872" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291872" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85034" e_stop="84414"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGAT</genome_strand>
        <mrna_strand>ATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAAGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E475355" ref_strand="+" ref_description="SGN-E475355 [cSTB-38-D10]">
      <seq>caattattggaaatcttcacttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggacaaataacaacagtggtcatttcttcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgttcctaatgctcttcaagcacacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgcagaatattgaacactaacctcttctcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaagaattgattgcttattgtgacaaatgtagtcaacaaggtgaagcgttggatgtaggtcaagttgctttcaagactaatctcaacttgttgtcaaacacacttttctccaaggatttggctgaccctttttcagattcaaaggtagagttgaaggaagttatatggggtgtcatggctgaggtagggaagcctaacctagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85285" stop="84144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84985" g_stop="84444" g_length="542"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="542" r_length="542" r_score="0.959"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E475355" ref_strand="+">
        <total_alignment_score>0.959</total_alignment_score>
        <cumulative_length_of_scored_exons>542</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E475355" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84985" e_stop="84444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTA</genome_strand>
        <mrna_strand>CAATTATTGGAAATCTTCACTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGACAAATAACAACAGTGGTCATTTCTTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGTTCCTAATGCTCTTCAAGCACACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGCAGAATATTGAACACTAACCTCTTCTCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAAGAATTGATTGCTTATTGTGACAAATGTAGTCAACAAGGTGAAGCGTTGGATGTAGGTCAAGTTGCTTTCAAGACTAATCTCAACTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGACCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTGTCATGGCTGAGGTAGGGAAGCCTAACCTAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302969" ref_strand="+" ref_description="SGN-E302969 [cLEW-26-D4]">
      <seq>aacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaggatttggctgatcctttttcagattcaaaggtagagttgaaggaagttatatggggtatcatggctgaggtagggaagcctaatttagta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85179" stop="84144"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84879" g_stop="84444" g_length="436"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="436" r_length="436" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E302969" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>436</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302969" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84879" e_stop="84444"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTA</genome_strand>
        <mrna_strand>AACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390674" ref_strand="+" ref_description="SGN-E390674 [TUS-46-F12]">
      <seq>aaatatgtagcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaggatttggctgatcctttttcagattcaaaggtagagttgaaggaagttatatggggtatcatggctgaggt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85336" stop="84163"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85036" g_stop="84463" g_length="574"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="574" r_length="574" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E390674" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>574</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390674" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85036" e_stop="84463"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGT</genome_strand>
        <mrna_strand>AAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E291937" ref_strand="+" ref_description="SGN-E291937 [cLET-7-M17]">
      <seq>atatgtagcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttagggnnntnncccnaaaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctattgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgcctgtcctcaatggcaaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaggatttggctgatcctttttcagattcaaaggtagagttgaaggaagttatatggggtatcatggct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85334" stop="84168"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85034" g_stop="84468" g_length="567"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="578" r_length="578" r_score="0.954"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E291937" ref_strand="+">
        <total_alignment_score>0.954</total_alignment_score>
        <cumulative_length_of_scored_exons>567</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E291937" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85034" e_stop="84468"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTA-GG---T----C---AAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCT</genome_strand>
        <mrna_strand>ATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGGNNNTNNCCCNAAAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTATTGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGCCTGTCCTCAATGGCAAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E390673" ref_strand="+" ref_description="SGN-E390673 [TUS-46-F10]">
      <seq>aaatatgtagcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaggatttggctgatcctttttcagattca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85336" stop="84207"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85036" g_stop="84507" g_length="530"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="530" r_length="530" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E390673" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>530</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E390673" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85036" e_stop="84507"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCA</genome_strand>
        <mrna_strand>AAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E302472" ref_strand="+" ref_description="SGN-E302472 [cLEW-27-J2]">
      <seq>aaatatgtagcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagccccaccaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgccttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaaccaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaggatttggctgatcctttttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85336" stop="84214"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85036" g_stop="84514" g_length="523"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="527" r_length="527" r_score="0.983"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E302472" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>523</cumulative_length_of_scored_exons>
        <coverage percentage="0.992" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E302472" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85036" e_stop="84514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAG-CGCA-CAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACG-CTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAA-CAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTC</genome_strand>
        <mrna_strand>AAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCCCCACCAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACCAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E300235" ref_strand="+" ref_description="SGN-E300235 [cLEW-17-B11]">
      <seq>ttagtgttggctaatatcataccaaaaatatgtagcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttctccaaagatttggctgatccttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85361" stop="84215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85061" g_stop="84515" g_length="547"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="547" r_length="547" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E300235" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>547</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E300235" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85061" e_stop="84515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTAGTGTTGGCTAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTT</genome_strand>
        <mrna_strand>TTAGTGTTGGCTAATATCATACCAAAAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAAGATTTGGCTGATCCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E472914" ref_strand="+" ref_description="SGN-E472914 [cSTB-30-I18]">
      <seq>attgcacaacaagtccttaaaactcaagatcaagcctcttcatctagatttggacctaatgctctgcacgcacacaaccattacaaattctgtgtgggatggcttcctgtttgtgctcaatggcgaacgcttcgcagaatattgaacataaatatcttctctcccaataggcttaatacaaatgacgatctaaggtctcaaaaggtgaaagaattgattgcttattgtgacaaatttagtcaacaaggtgaagctttggatgtaggtcaagttgctttcaagactaatctcaacttgttgtcaaacacacttttctccaaggatttggc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85154" stop="84226"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84854" g_stop="84526" g_length="329"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="329" r_length="329" r_score="0.903"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E472914" ref_strand="+">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>329</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E472914" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84854" e_stop="84526"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGC</genome_strand>
        <mrna_strand>ATTGCACAACAAGTCCTTAAAACTCAAGATCAAGCCTCTTCATCTAGATTTGGACCTAATGCTCTGCACGCACACAACCATTACAAATTCTGTGTGGGATGGCTTCCTGTTTGTGCTCAATGGCGAACGCTTCGCAGAATATTGAACATAAATATCTTCTCTCCCAATAGGCTTAATACAAATGACGATCTAAGGTCTCAAAAGGTGAAAGAATTGATTGCTTATTGTGACAAATTTAGTCAACAAGGTGAAGCTTTGGATGTAGGTCAAGTTGCTTTCAAGACTAATCTCAACTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E305501" ref_strand="+" ref_description="SGN-E305501 [cLEX-15-J4]">
      <seq>gattactattcacttgtgtttgtgtcaattttagtgttggctaatatcatagcaaaaatatgtagcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttctaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcgacaaggtgaagctttggatataggtcaagttgttttcaagactagtcttaatttgttgtcaaacacacttttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85391" stop="84239"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85091" g_stop="84539" g_length="553"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="553" r_length="553" r_score="0.995"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E305501" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>553</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E305501" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85091" e_stop="84539"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATTACTATACACTTGTGTTTGTGTCAATTTTAGTGTTGGCTAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCT</genome_strand>
        <mrna_strand>GATTACTATTCACTTGTGTTTGTGTCAATTTTAGTGTTGGCTAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCTAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCGACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E294327" ref_strand="+" ref_description="SGN-E294327 [cLET-14-J22]">
      <seq>aatatgtagcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctcttatcttccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaacaattgattgattattgtgacaaatgtagtcaacaaggtgaagctttggatataggtc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85335" stop="84287"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85035" g_stop="84587" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="449" r_length="449" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E294327" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E294327" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85035" e_stop="84587"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTC</genome_strand>
        <mrna_strand>AATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E294328" ref_strand="+" ref_description="SGN-E294328 [cLET-14-J22](-)">
      <seq>gacctatatccaaagcttcaccttgttgactacatttgtcacaataatcaatcaattgtttcaccttttgagaccttagatgttgatttgcatcaagcttattggaagataagaggttagtgttcaatattcttcgaagcgttcgccattgaggacaaacaggaagccatgccacagaaaatttgtaatggttgtgcgcttgaagagcattaggagcaaatctagatgaaaaggcttgatcttgagttttaaggacttgttttgcaatggttgatgaggaaatgactattgttgttatttgacctaactttaaactcataattggaccataattttttgcaagattggctagtgatatatgaggttttgcacctaacaactgaaggtttccaataattggccatggtgatggacctggtggaagttttttgcttcctttgctacatatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="84287" stop="85335"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84587" g_stop="85035" g_length="449"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="449" r_length="449" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E294328" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>449</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E294328" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84587" e_stop="85035"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GACCTATATCCAAAGCTTCACCTTGTTGACTACATTTGTCACAATAATCAATCAATTGTTTCACCTTTTGAGACCTTAGATGTTGATTTGCATCAAGCTTATTGGAAGATAAGAGGTTAGTGTTCAATATTCTTCGAAGCGTTCGCCATTGAGGACAAACAGGAAGCCATGCCACAGAAAATTTGTAATGGTTGTGCGCTTGAAGAGCATTAGGAGCAAATCTAGATGAAAAGGCTTGATCTTGAGTTTTAAGGACTTGTTTTGCAATGGTTGATGAGGAAATGACTATTGTTGTTATTTGACCTAACTTTAAACTCATAATTGGACCATAATTTTTTGCAAGATTGGCTAGTGATATATGAGGTTTTGCACCTAACAACTGAAGGTTTCCAATAATTGGCCATGGTGATGGACCTGGTGGAAGTTTTTTGCTTCCTTTGCTACATATT</genome_strand>
        <mrna_strand>GACCTATATCCAAAGCTTCACCTTGTTGACTACATTTGTCACAATAATCAATCAATTGTTTCACCTTTTGAGACCTTAGATGTTGATTTGCATCAAGCTTATTGGAAGATAAGAGGTTAGTGTTCAATATTCTTCGAAGCGTTCGCCATTGAGGACAAACAGGAAGCCATGCCACAGAAAATTTGTAATGGTTGTGCGCTTGAAGAGCATTAGGAGCAAATCTAGATGAAAAGGCTTGATCTTGAGTTTTAAGGACTTGTTTTGCAATGGTTGATGAGGAAATGACTATTGTTGTTATTTGACCTAACTTTAAACTCATAATTGGACCATAATTTTTTGCAAGATTGGCTAGTGATATATGAGGTTTTGCACCTAACAACTGAAGGTTTCCAATAATTGGCCATGGTGATGGACCTGGTGGAAGTTTTTTGCTTCCTTTGCTACATATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E474932" ref_strand="+" ref_description="SGN-E474932 [cSTB-38-M18]">
      <seq>gattactatacacttttctttggatcaattttactattggctatcctttgtaatatcatagcaaaaatatgtagcaaaggaagcaaaaaaacttccaccagggccatcaccatggccaattattggaaatcttcacttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggacaaataacaacagtggtcatttcttcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgttcctaatgctcttcaagcacacaaccattacaaattctctgtgggatggcttcctgtttgtcctcaatggcgaacgcttcgcagaatattgaacataaatatcttctctcccaataggcttgatgcaaatcaacatctaaagtctcaaaaggtgaaagaattgattgcttattgtgacaaatgtagtcaacaaggtgaagctttggatat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85355" stop="84292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85057" g_stop="84592" g_length="466"/>
          <reference_exon_boundary r_type="cDNA" r_start="45" r_stop="510" r_length="466" r_score="0.940"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E474932" ref_strand="+">
        <total_alignment_score>0.940</total_alignment_score>
        <cumulative_length_of_scored_exons>466</cumulative_length_of_scored_exons>
        <coverage percentage="0.914" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E474932" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85057" e_stop="84592"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGGCTAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAA-AAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATAT</genome_strand>
        <mrna_strand>CCTTTG-TAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAAAAAACTTCCACCAGGGCCATCACCATGGCCAATTATTGGAAATCTTCACTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGACAAATAACAACAGTGGTCATTTCTTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGTTCCTAATGCTCTTCAAGCACACAACCATTACAAATTCTCTGTGGGATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGCAGAATATTGAACATAAATATCTTCTCTCCCAATAGGCTTGATGCAAATCAACATCTAAAGTCTCAAAAGGTGAAAGAATTGATTGCTTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E475922" ref_strand="+" ref_description="SGN-E475922 [cSTB-42-B20]">
      <seq>caattttactattggctatcctttgtaatatcatagcaaaaatatgtagcaaaggaagcaaaaaacttccaccagggccatcaccatggccaattattggaaatcttcacttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggacaaataacaacagtggtcatttcttcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgttcctaatgctcttcaagcacacaaccattacaaattctctgtgggatggcttcctgtttgtcctcaatggcgaacgcttcgcagaatattgaacataaatatcttctctcccaataagcttgatgcaaatcaacatctaaggtctcaaaaggtgaaagaattgattgcttatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85355" stop="84329"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85057" g_stop="84629" g_length="429"/>
          <reference_exon_boundary r_type="cDNA" r_start="20" r_stop="447" r_length="428" r_score="0.944"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E475922" ref_strand="+">
        <total_alignment_score>0.944</total_alignment_score>
        <cumulative_length_of_scored_exons>429</cumulative_length_of_scored_exons>
        <coverage percentage="0.960" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E475922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85057" e_stop="84629"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGTTGGCTAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATT</genome_strand>
        <mrna_strand>CCTTTG-TAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGGCCATCACCATGGCCAATTATTGGAAATCTTCACTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGACAAATAACAACAGTGGTCATTTCTTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGTTCCTAATGCTCTTCAAGCACACAACCATTACAAATTCTCTGTGGGATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGCAGAATATTGAACATAAATATCTTCTCTCCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAAGAATTGATTGCTTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310265" ref_strand="+" ref_description="SGN-E310265 [cTOA-1-A4]">
      <seq>ctatggattactatacacttgtgtttgtgtcaattttagtgttggctaatatcatagcaaaaatatgtatcaaaggaagcaaaaaacttccaccaggtccatcaccatggccaattattggaaaccttcagttgttaggtgcaaaacctcatatatcactagccaatcttgcaaaaaattatggtccaattatgagtttaaagttaggtcaaataacaacaatagtcatttcctcatcaaccattgcaaaacaagtccttaaaactcaagatcaagccttttcatctagatttgctcctaatgctcttcaagcgcacaaccattacaaattttctgtggcatggcttcctgtttgtcctcaatggcgaacgcttcgaagaatattgaacactaacctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="85396" stop="84399"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="85096" g_stop="84699" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="398" r_length="398" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E310265" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>398</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310265" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="85096" e_stop="84699"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTATGGATTACTATACACTTGTGTTTGTGTCAATTTTAGTGTTGGCTAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTC</genome_strand>
        <mrna_strand>CTATGGATTACTATACACTTGTGTTTGTGTCAATTTTAGTGTTGGCTAATATCATAGCAAAAATATGTATCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309339" ref_strand="+" ref_description="SGN-E309339 [cLEY-22-A19]">
      <seq>atgtgtgggaaattaatagagattctactttttgggaggatcccttaatgtttaagcctgagaggttttggcattcaaatttatacgtgcgaggacaagattttgaactgatcccatttggtgcgggtagaagaatgtgccctgccttgccacttgcattgcgaatgattccagtcatgttgggctcactcttgaattccttcaattggaaactcgaggcaggcattagaccagaagacctagacatggaggaaaaatttggtttggctttaatcaaagctca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="89688" stop="88806"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="89388" g_stop="89106" g_length="283"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="283" r_length="283" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E309339" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>283</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309339" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="89388" e_stop="89106"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGTGTGGGAAATTAATAGAGATTCTACTTTTTGGGAGGATCCCTTAGTGTTTAAACCTGAGAGGTTTTGGCATTCAAATTTAGACGTGCGAGGACAAGATTTTGAACTGATCCCATTTGGTGCGGGTAGAAGAATGTGCCCTGCCTTGCCACTTGCATTGCGAATGATTCCAGTCATGTTGGGCTCACTCTTGAATTCCTTCAATTGGAAACTCGAGGCAGGCATTAGACCAGAAGACCTAGACATGGAGGAGAAATTTGGTTTGGCTTTAGTCAAAGCTCA</genome_strand>
        <mrna_strand>ATGTGTGGGAAATTAATAGAGATTCTACTTTTTGGGAGGATCCCTTAATGTTTAAGCCTGAGAGGTTTTGGCATTCAAATTTATACGTGCGAGGACAAGATTTTGAACTGATCCCATTTGGTGCGGGTAGAAGAATGTGCCCTGCCTTGCCACTTGCATTGCGAATGATTCCAGTCATGTTGGGCTCACTCTTGAATTCCTTCAATTGGAAACTCGAGGCAGGCATTAGACCAGAAGACCTAGACATGGAGGAAAAATTTGGTTTGGCTTTAATCAAAGCTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E415948" ref_strand="+" ref_description="SGN-E415948 [STM-22-A12]">
      <seq>aattctttttttaaaagcctacaaacataaacttagaaatttattatnttgaaccataagcaaagggcacaatagtttgaattttgaaacagagaaatatactttctcagtgcatattatgcacaaacacgtaaacaactcaagcaactgcaacatcatgtagccttccatgctgaaaggggcggcgtttctgaatttttgaaagtactcataccaggtatatatcgatcaccctggactgcgttagctgaggcaatggattcaagttctgccatgtcttctgatgttaactttacggacagagctccaatgttctggttgaagttctcaatcttagtggtgccagggatgggacacacgtcgtttccttggtgatgtacccatgccaacgctagctgagagggagtgcatcccttcttagctgccatttgacaaatccgctcatacagcttttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="+" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="102059" stop="103102"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="102348" g_stop="102802" g_length="455"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="455" r_length="455" r_score="0.936"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="+" ref_id="SGN-E415948" ref_strand="+">
        <total_alignment_score>0.936</total_alignment_score>
        <cumulative_length_of_scored_exons>455</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E415948" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="102348" e_stop="102802"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TACTCCATAGGTAAAAGTCTACAAACATAAACAT-GAACTTTATTAT-TTGAACCATAATTAAATGGCACTATAGTTTGAATTTTGAAACAGAGAAATATACTCTCTCAGTGCATATTATGCACAACACAAGAACAACAACTCAAGCAACTGCAACATCATGTAGCCTTCCATGCTGAAAGGGGCGGCGTTTCTGAATTTTTGAAAGTACTCATACCAGGTATATATCGATCACCCTGGACTGCGTTAGCTGAGGCAATGGATTCAAGTTCTGCCATGTCTTCTGATGTTAACTTTACAGACAGAGCTCCAATGTTCTGGTTGAAGTTTTCAATCTTAGTGGTGCCAGGGATGGGACACACGTCGTTTCCTTGGTGATGTACCCAAGCCAACGCTAGTTGAGAAGGAGTGCATCCCTTCTTAGCTGCCATTTGACAAATTCGCTCATACAGCTTTTT</genome_strand>
        <mrna_strand>AATTCTTTTTTTAAAAGCCTACAAACATAAACTTAGAAATTTATTATNTTGAACCATAAGCAAAGGGCACAATAGTTTGAATTTTGAAACAGAGAAATATACTTTCTCAGTGCATATTATGCACAA-ACACGTA-AACAACTCAAGCAACTGCAACATCATGTAGCCTTCCATGCTGAAAGGGGCGGCGTTTCTGAATTTTTGAAAGTACTCATACCAGGTATATATCGATCACCCTGGACTGCGTTAGCTGAGGCAATGGATTCAAGTTCTGCCATGTCTTCTGATGTTAACTTTACGGACAGAGCTCCAATGTTCTGGTTGAAGTTCTCAATCTTAGTGGTGCCAGGGATGGGACACACGTCGTTTCCTTGGTGATGTACCCATGCCAACGCTAGCTGAGAGGGAGTGCATCCCTTCTTAGCTGCCATTTGACAAATCCGCTCATACAGCTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E317049" ref_strand="+" ref_description="SGN-E317049 [cTOA-27-C18]">
      <seq>tttggtattgttttaggagatgaaaagaaagcagaaggattgagagaagtgcatggaaatccagcctatgtaaggtcagcgtgcgaggctagtttaaagcgacttgatgttgactgtatagacttgtactatcagcaccgaattgatacacgtgtgcccattgaagtcacggttggagaacttaagaagctggtcgaagaaggtaaaataaaatatataggtctatccgaggcttcagcatcaacaattagaagagcacatgctgttcatccaataacagcagtacaattagaatggtctctatggtcgagagatgtagaggaagaaataatccctacttgcagagaactcggaattgggattgtggcatacagtccactaggacggggctttttgtcttccggtccaaagctgcttgaggatttgtcaaatgaagactaccgaaagcatctgccaaggttccaggcggagaatcttgagcataacaaaaagctgtatgagcgaatttgtcaaatggcagctaagaagggatgcactccttctcaactagcgttggcttgggtacatcaccaaggaaacgacgtgtgtcccatccctggcaccactaagattgaaaacttcaaccagaacattggagctctgtctgtaaagttaacatcagaagacatggcagaacttgaatccattgcctcagctaacgcagtccagggtgatcgatatatacctggtatgagtactttcaaaaattcagaaacgccgcccctttcagcatggaaggctacatgatgttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="104509" stop="102197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="104209" g_stop="104039" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="171" r_length="171" r_score="0.988"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="104038" i_stop="103549" i_length="490">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="103548" g_stop="103376" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="172" r_stop="344" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="103375" i_stop="103291" i_length="85">
            <donor d_prob="0.940" d_score="1.00"/>
            <acceptor a_prob="0.774" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="103290" g_stop="103188" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="345" r_stop="447" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="103187" i_stop="102842" i_length="346">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="102841" g_stop="102497" g_length="345"/>
          <reference_exon_boundary r_type="cDNA" r_start="448" r_stop="792" r_length="345" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E317049" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>792</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E317049" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="104209" e_stop="104039"/>
          <exon e_start="103548" e_stop="103376"/>
          <exon e_start="103290" e_stop="103188"/>
          <exon e_start="102841" e_stop="102497"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCATGGAAATCCAGCCTATGTAAGGTCAGCGTGCGAGGCTAGTTTAAAGCGACTTGATGTTGACTGTATAGACTTGTACTATCAGCACCGAATTGATACACGTGTGCCCATTGAAGTCACGGTTAGTTCTTTTTTTTCCATTTATGACTCTTTGAAGGTACTTATTATGTATTTTGGAAAATGATGTAATATTTGATCTTACTCGGAGGATGACTACTGAGGAAATAGTGTTGCTAAAATCTAATAAAATAATTACTGTATAGTGGTTATATTGTATCTACAAATGCTCTTGACTGTAATGCAAGCTTCTGGCTAGTATTCGAGTATATGTTTTTACTTATTATCTCAATGCAATATTTCGGAATTGATCTAGCACTTGTTAGCCACACTCTTTATATTGCTTAGACCAAAATCATTGCCCTTATAGTCCAAATCAGCAAGACAATTCCCTGTCTTTCTGCTTTATTGAAAAAGAAAGCAACAATAAAAGAAATGATCATCCAGAGACTGGAATCAAACAATATGAAGATGAACGGAAAAATAGATTAACTGCTCTCTTTTTCAGATTATTGTCAACATTTCTTATTCCCTTGAGATTCCTGTTTTACCAGGTTGGAGAACTTAAGAAGCTGGTCGAAGAAGGTAAAATAAAATATATAGGTCTATCCGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAGGTCTATTCTTCTTTCTGTTAGTTTTCGTGTTTGGGGTATACAGCAGTGTGAGATCCTGATGTTCTCCTATCTGTTAATCGTTCAGAGAACTCGGAATTGGGATTGTGGCATACAGTCCACTAGGACGGGGCTTTTTGTCTTCCGGTCCAAAGCTGCTTGAGGATTTGTCAAATGAAGACTACCGAAAGGTTTGCTTTGTTGTTCCGGATTTCAAACATATTGCTATCATGTTTAATTGCATTGATGTATTTCTGTTGCGAGTATATTTGCTTGTTTTATAGAAGAAAGAGTTTCGAATAATAAGCTATTTGATCTGGATGGTATTACTAGGGACAAAAGCTTTCAATCAAAAGTCATGAAGTATGAACTTAACATTGTCCCTTATATATTGCCATTTGTTTAATTGGTATACAATGCTCTCCTTTGTGCTGTTTAGTGTTACTATTTGTTTTCCTCTACTTGCTACGCGATATTGTGGGAGAGTAAAGTACGTCTTCAATTGGTTGGACTTAAAATTGATCCTCAATTTTGCAGCATCTGCCAAGGTTCCAGGCGGAGAATCTTGAGCATAACAAAAAGCTGTATGAGCGAATTTGTCAAATGGCAGCTAAGAAGGGATGCACTCCTTCTCAACTAGCGTTGGCTTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCTGGCACCACTAAGATTGAAAACTTCAACCAGAACATTGGAGCTCTGTCTGTAAAGTTAACATCAGAAGACATGGCAGAACTTGAATCCATTGCCTCAGCTAACGCAGTCCAGGGTGATCGATATATACCTGGTATGAGTACTTTCAAAAATTCAGAAACGCCGCCCCTTTCAGCATGGAAGGCTACATGATGTTGC</genome_strand>
        <mrna_strand>TTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGATTGAGAGAAGTGCATGGAAATCCAGCCTATGTAAGGTCAGCGTGCGAGGCTAGTTTAAAGCGACTTGATGTTGACTGTATAGACTTGTACTATCAGCACCGAATTGATACACGTGTGCCCATTGAAGTCACG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGAACTTAAGAAGCTGGTCGAAGAAGGTAAAATAAAATATATAGGTCTATCCGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG.....................................................................................AGAACTCGGAATTGGGATTGTGGCATACAGTCCACTAGGACGGGGCTTTTTGTCTTCCGGTCCAAAGCTGCTTGAGGATTTGTCAAATGAAGACTACCGAAAG..........................................................................................................................................................................................................................................................................................................................................................CATCTGCCAAGGTTCCAGGCGGAGAATCTTGAGCATAACAAAAAGCTGTATGAGCGAATTTGTCAAATGGCAGCTAAGAAGGGATGCACTCCTTCTCAACTAGCGTTGGCTTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCTGGCACCACTAAGATTGAAAACTTCAACCAGAACATTGGAGCTCTGTCTGTAAAGTTAACATCAGAAGACATGGCAGAACTTGAATCCATTGCCTCAGCTAACGCAGTCCAGGGTGATCGATATATACCTGGTATGAGTACTTTCAAAAATTCAGAAACGCCGCCCCTTTCAGCATGGAAGGCTACATGATGTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E437995" ref_strand="+" ref_description="SGN-E437995 [cSTA-5-F10]">
      <seq>tggcgacggaaggaacaaaagtgggaagaatgaaattgggttcagagggatttgaagtatctgctcaaggacttggttgtatgggtatgtccgctttttacgggccgcccaaacccgaacccgaaatgatcgaactaatccaccatgccattaactccggcgtcactcttcttgatacctccgatgtatatgggccttacaccaacgaaatcctcattggtaatgctttgaagggagggataagagaacgagctgtattagcaacaaaatttggtattgttttaggagatgaaaagaaagcagaaggaaagagagaagtgcatggaaatccagcctatgtaaggtcagcgtgcgaggctagtttaaagcgacttgatgttgact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="105902" stop="103795"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105602" g_stop="105379" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105378" i_stop="104255" i_length="1124">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104254" g_stop="104095" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="384" r_length="160" r_score="0.969"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E437995" ref_strand="+">
        <total_alignment_score>0.964</total_alignment_score>
        <cumulative_length_of_scored_exons>384</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E437995" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105602" e_stop="105379"/>
          <exon e_start="104254" e_stop="104095"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCGACGGAAGGAACAAAAGTGGGAAGAATGAAGTTGGGTTCAGAGGGGCTTCAAGTATCTGTTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGAAATGATCGAACTAATCCACCACGCCATTAACTCCGGCGTCACTCTTCTTGATAGCTCCGATGTATATGGGCCATACACCAACGAAATCCTCATTGGTAAAGTATGATGTTCAACCTTTTTTACCCCAAATGCTTAATTTTTTTTTGTTTATGCATTAGGATGGTTGTACGTAATTCTATGATTGTTGTACCTTTATTGGTTTTGGTAAAAGTATGTGATTGCTACTCGTCGTCCCAAGATGAGAACTTTACAGTTAAATTGTTACTAATAAATAAAGCTATACTATCTGTTTCAATTTGTTTGTCTTACTTTTCTTGTTAATCCGTTTTTAAAATTGCTTATATGTTTAGATCACGCAATTGAAGAACATTTTGATACATTCTACGTATCTTTAGTTTAACATCATAAGATTCAAAAGTTTTTCATTATTCTCTTAAATTTTGTGTAAGTGAAAACCAGGCAGACAAATTGAAATGGAGTATCATTTTTGGAACGGACTAAAAAAAGGAGTGTTACATCACAGGACGGAGGGAGTAAGTACTAAGTAGTAGTGCTAATTACTGGTGTTTGAGAAGGAACACTTTTTTATTTGTTTACATATGCAGAATATGATTGTTCTCAGAGTTTAAAGTCTTGCACTTTTCTTTTTTTGGGTTGGCGGCGGGGTTGTTATGAAACTTTGAGGTACTATTACATGTTTTCACCTGACAATGTGCTACCTTTCAGACTTTCAGATGCTTAAGCCTCGCGAGTTACACCTTAAGAAGAAGAATTTTCATGATTCTTCAAACCTGTATCATCATGCGCGATTTCTAATTTTACTATTTGAGCTTACCTTGTTTTTTTCCTGCAAAGTCGTTTTTTTCTTAATATAAAGTACACTGAAACAAAAGTGTAGTGAACTTGTATTTTCTTATAGAAGTGTTCAAGTTAACTTATGTGCACCTTGATTATTTCATCATGTAGTTGCTACCTTCCATTAGCACAAATATTGAGTAACTTTACAGACCTAGGCTGAGATAAATGAAATGAAATCATTTTGTATTTTATTTTTAATTTTTGTCTCCGCTGAGATTTGAATCGAACTTTATAAAGTTCGCATCGACTTCATCAACCATAAACCACACTCTTAAGCTTATTCATTCATCGCATAAGCAACTGAGAATTTTTAACCATTTTGCAATAATTGTTGCTTGCAATTCTGATTATTATGTATCTATGTAGGCTTTGAAGGGAGGGATGAGAGAACGGGTTGAATTAGCAACAAAGTTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCATGGAAATCCAGCCTATGTAAGGTCAGCGTGCGAGGCTAGTTTAAAGCGACTTGATGTTGACT</genome_strand>
        <mrna_strand>TGGCGACGGAAGGAACAAAAGTGGGAAGAATGAAATTGGGTTCAGAGGGATTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGAAATGATCGAACTAATCCACCATGCCATTAACTCCGGCGTCACTCTTCTTGATACCTCCGATGTATATGGGCCTTACACCAACGAAATCCTCATTGGTAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGAAGGGAGGGATAAGAGAACGAGCTGTATTAGCAACAAAATTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCATGGAAATCCAGCCTATGTAAGGTCAGCGTGCGAGGCTAGTTTAAAGCGACTTGATGTTGACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E415947" ref_strand="+" ref_description="SGN-E415947 [STM-22-A12]">
      <seq>tggcgacggaaggaacaaaagtgggaagaatgaaattgggttcagagggatttgaagtatctgctcaaggacttggttgtatgggtatgtccgctttttacgggccgcccaaacccgaacccgaaatgatcgaactaatccaccatgccattaactccggcgtcactcttcttgatacctccgatgtatatgggccttacaccaacgaaatcctcattggtaatgctttgaagggagggataagagaacgagctgtattagcaacaaaatttggtattgttttaggagatgaaaagaaagcagaaggaaagagagaagtgcatggaaatccagccta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="105902" stop="103842"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105602" g_stop="105379" g_length="224"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="224" r_length="224" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105378" i_stop="104255" i_length="1124">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104254" g_stop="104142" g_length="113"/>
          <reference_exon_boundary r_type="cDNA" r_start="225" r_stop="337" r_length="113" r_score="0.956"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E415947" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>337</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E415947" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105602" e_stop="105379"/>
          <exon e_start="104254" e_stop="104142"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGCGACGGAAGGAACAAAAGTGGGAAGAATGAAGTTGGGTTCAGAGGGGCTTCAAGTATCTGTTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGAAATGATCGAACTAATCCACCACGCCATTAACTCCGGCGTCACTCTTCTTGATAGCTCCGATGTATATGGGCCATACACCAACGAAATCCTCATTGGTAAAGTATGATGTTCAACCTTTTTTACCCCAAATGCTTAATTTTTTTTTGTTTATGCATTAGGATGGTTGTACGTAATTCTATGATTGTTGTACCTTTATTGGTTTTGGTAAAAGTATGTGATTGCTACTCGTCGTCCCAAGATGAGAACTTTACAGTTAAATTGTTACTAATAAATAAAGCTATACTATCTGTTTCAATTTGTTTGTCTTACTTTTCTTGTTAATCCGTTTTTAAAATTGCTTATATGTTTAGATCACGCAATTGAAGAACATTTTGATACATTCTACGTATCTTTAGTTTAACATCATAAGATTCAAAAGTTTTTCATTATTCTCTTAAATTTTGTGTAAGTGAAAACCAGGCAGACAAATTGAAATGGAGTATCATTTTTGGAACGGACTAAAAAAAGGAGTGTTACATCACAGGACGGAGGGAGTAAGTACTAAGTAGTAGTGCTAATTACTGGTGTTTGAGAAGGAACACTTTTTTATTTGTTTACATATGCAGAATATGATTGTTCTCAGAGTTTAAAGTCTTGCACTTTTCTTTTTTTGGGTTGGCGGCGGGGTTGTTATGAAACTTTGAGGTACTATTACATGTTTTCACCTGACAATGTGCTACCTTTCAGACTTTCAGATGCTTAAGCCTCGCGAGTTACACCTTAAGAAGAAGAATTTTCATGATTCTTCAAACCTGTATCATCATGCGCGATTTCTAATTTTACTATTTGAGCTTACCTTGTTTTTTTCCTGCAAAGTCGTTTTTTTCTTAATATAAAGTACACTGAAACAAAAGTGTAGTGAACTTGTATTTTCTTATAGAAGTGTTCAAGTTAACTTATGTGCACCTTGATTATTTCATCATGTAGTTGCTACCTTCCATTAGCACAAATATTGAGTAACTTTACAGACCTAGGCTGAGATAAATGAAATGAAATCATTTTGTATTTTATTTTTAATTTTTGTCTCCGCTGAGATTTGAATCGAACTTTATAAAGTTCGCATCGACTTCATCAACCATAAACCACACTCTTAAGCTTATTCATTCATCGCATAAGCAACTGAGAATTTTTAACCATTTTGCAATAATTGTTGCTTGCAATTCTGATTATTATGTATCTATGTAGGCTTTGAAGGGAGGGATGAGAGAACGGGTTGAATTAGCAACAAAGTTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCATGGAAATCCAGCCTA</genome_strand>
        <mrna_strand>TGGCGACGGAAGGAACAAAAGTGGGAAGAATGAAATTGGGTTCAGAGGGATTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGAAATGATCGAACTAATCCACCATGCCATTAACTCCGGCGTCACTCTTCTTGATACCTCCGATGTATATGGGCCTTACACCAACGAAATCCTCATTGGTAAT....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGAAGGGAGGGATAAGAGAACGAGCTGTATTAGCAACAAAATTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCATGGAAATCCAGCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E365953" ref_strand="+" ref_description="SGN-E365953 [cLPT-11-C8]">
      <seq>cagagtgaagtaggctgaaacgacaacaatggcgacggaaggaacaaaagtgggaagaatgaaattgggttcagaggggcttcaagtatctgctcaaggacttggttgtatgggtatgtccgctttttacgggccgcccaaacccgaacccgatatgatcgaactaatccaccacgccattaactccggcgtcactcttctcgatacctccgatgtatatgggccttacaccaatgaaatcctcattggtaaagctttgaagggagggatgagagaacgggttgtattagcaacaaagtttggtattgttttaggagatgaaaagaaagcagaaggaaagagagaagtgcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="105931" stop="103856"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105631" g_stop="105379" g_length="253"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="253" r_length="253" r_score="0.964"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105378" i_stop="104255" i_length="1124">
            <donor d_prob="0.989" d_score="0.94"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="104254" g_stop="104156" g_length="99"/>
          <reference_exon_boundary r_type="cDNA" r_start="254" r_stop="352" r_length="99" r_score="0.990"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E365953" ref_strand="+">
        <total_alignment_score>0.972</total_alignment_score>
        <cumulative_length_of_scored_exons>352</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E365953" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105631" e_stop="105379"/>
          <exon e_start="104254" e_stop="104156"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGAGTGAAATAGGCTGAAAGGACAACAATGGCGACGGAAGGAACAAAAGTGGGAAGAATGAAGTTGGGTTCAGAGGGGCTTCAAGTATCTGTTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGAAATGATCGAACTAATCCACCACGCCATTAACTCCGGCGTCACTCTTCTTGATAGCTCCGATGTATATGGGCCATACACCAACGAAATCCTCATTGGTAAAGTATGATGTTCAACCTTTTTTACCCCAAATGCTTAATTTTTTTTTGTTTATGCATTAGGATGGTTGTACGTAATTCTATGATTGTTGTACCTTTATTGGTTTTGGTAAAAGTATGTGATTGCTACTCGTCGTCCCAAGATGAGAACTTTACAGTTAAATTGTTACTAATAAATAAAGCTATACTATCTGTTTCAATTTGTTTGTCTTACTTTTCTTGTTAATCCGTTTTTAAAATTGCTTATATGTTTAGATCACGCAATTGAAGAACATTTTGATACATTCTACGTATCTTTAGTTTAACATCATAAGATTCAAAAGTTTTTCATTATTCTCTTAAATTTTGTGTAAGTGAAAACCAGGCAGACAAATTGAAATGGAGTATCATTTTTGGAACGGACTAAAAAAAGGAGTGTTACATCACAGGACGGAGGGAGTAAGTACTAAGTAGTAGTGCTAATTACTGGTGTTTGAGAAGGAACACTTTTTTATTTGTTTACATATGCAGAATATGATTGTTCTCAGAGTTTAAAGTCTTGCACTTTTCTTTTTTTGGGTTGGCGGCGGGGTTGTTATGAAACTTTGAGGTACTATTACATGTTTTCACCTGACAATGTGCTACCTTTCAGACTTTCAGATGCTTAAGCCTCGCGAGTTACACCTTAAGAAGAAGAATTTTCATGATTCTTCAAACCTGTATCATCATGCGCGATTTCTAATTTTACTATTTGAGCTTACCTTGTTTTTTTCCTGCAAAGTCGTTTTTTTCTTAATATAAAGTACACTGAAACAAAAGTGTAGTGAACTTGTATTTTCTTATAGAAGTGTTCAAGTTAACTTATGTGCACCTTGATTATTTCATCATGTAGTTGCTACCTTCCATTAGCACAAATATTGAGTAACTTTACAGACCTAGGCTGAGATAAATGAAATGAAATCATTTTGTATTTTATTTTTAATTTTTGTCTCCGCTGAGATTTGAATCGAACTTTATAAAGTTCGCATCGACTTCATCAACCATAAACCACACTCTTAAGCTTATTCATTCATCGCATAAGCAACTGAGAATTTTTAACCATTTTGCAATAATTGTTGCTTGCAATTCTGATTATTATGTATCTATGTAGGCTTTGAAGGGAGGGATGAGAGAACGGGTTGAATTAGCAACAAAGTTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCAT</genome_strand>
        <mrna_strand>CAGAGTGAAGTAGGCTGAAACGACAACAATGGCGACGGAAGGAACAAAAGTGGGAAGAATGAAATTGGGTTCAGAGGGGCTTCAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGATATGATCGAACTAATCCACCACGCCATTAACTCCGGCGTCACTCTTCTCGATACCTCCGATGTATATGGGCCTTACACCAATGAAATCCTCATTGGTAAA....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTTTGAAGGGAGGGATGAGAGAACGGGTTGTATTAGCAACAAAGTTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E544138" ref_strand="+" ref_description="SGN-E544138 [TUS-66-F2](-)">
      <seq>tccaaagctgcttgaggactgctcaaatgaagatttccgaaagtatctaccgaggttccagggcgagaatcttgagcacaacaaaaaactgtatgagaggatttgtcaaattgcagctaagaagggatgcaccccgtctcaactggcgttggcgtgggtacatcaccaaggaaacgacgtgtgtcccattcctggcaccactaagattgaaaacttaaaccagaacattggagctctgtccataaagcttacttctgaagacatgacagagcttgaatctattgcttcagctaatgcagtccagggtgataggtacggttcggctgcggcaacctacaaagattcagaaactccacccctttcagcatggaaggctacataaatataggctacgtgctgttgtttcaaataataaattatgtctccaaacataatttgaacttgcaatttttaagtttgcacgcttaccgtccaatcaatccctctttccaaaaaaaaagaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="106835" stop="105624"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="106535" g_stop="106493" g_length="43"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="43" r_length="43" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="106492" i_stop="106377" i_length="116">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106376" g_stop="105921" g_length="456"/>
          <reference_exon_boundary r_type="cDNA" r_start="44" r_stop="498" r_length="455" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E544138" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>499</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E544138" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="106535" e_stop="106493"/>
          <exon e_start="106376" e_stop="105921"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAGGTTAGCTTGTGTTTATTGTTCGTCTTGGAGTTGTAGCATACTCGCATCATGTTTAATTTCAGTGCATTTGTGTTGTTAGTGTAATATGGGGCATGGTTTGATCTTCAATTTTGCAGTATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCAACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATATAGGCTACGTGCTGTTGTTTCAAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAAGTTTGCACGCTTACCGTCCAATCAATCCCTCTTATCCAACAACTT</genome_strand>
        <mrna_strand>TCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAG....................................................................................................................TATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCAACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATATAGGCTACGTGCTGTTGTTTCAAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAAGTTTGCACGCTTACCGTCCAATCAATCCCTCTT-TCCAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E693389" ref_strand="+" ref_description="SGN-E693389 [LH_Ea01D03](-)">
      <seq>gggcagcatgtgaggctagcttaaagcgacttgatgttgactgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtgacggttggagaacttaagaagctggttgaagagggtaaaattaaatatataggtctatcggaggcttcagcatcaacaattagaagagcacatgcagttcatccaataacagcggttcaattagaatggtctctatggtcgagagatgtagaggaagacatagtccctacttgcagagaacttggaatcgggattgtagcatacagtccactaggacgtggctttttatcatccggtccaaagctgcttgaggactgctcaaatgaagatttccgaaagtatctaccgaggttccagggcgagaatcttgagcataacaaaaaactgtatgagaggatttgtcaaattgcagctaagaagggatgcaccccgtctcaacttgcattggcgtgggtacatcaccaaggaaacgacgtgtgtcccattcctggcaccactaagattgaaaacttcaaccagaacattggagctctgtccataaagcttacttctgaagacatgacagagcttgaatctattgcttcagctaatccagtccagggtgataggtacggttcggctgcggctacctacaaagattcagaaactccacccctttcagcatggaaggctacataaatataggctactttctgtagggtcaaataataaattatgtctccaaacataatttcaaaatgggatttttaagtttgcacgcttaccattaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="107856" stop="86687"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107556" g_stop="107459" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="0.980"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107458" i_stop="106854" i_length="605">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106853" g_stop="106681" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="271" r_length="173" r_score="0.988"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106680" i_stop="106596" i_length="85">
            <donor d_prob="0.999" d_score="0.98"/>
            <acceptor a_prob="0.440" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106595" g_stop="106493" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="272" r_stop="374" r_length="103" r_score="0.990"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106492" i_stop="106377" i_length="116">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106376" g_stop="105932" g_length="445"/>
          <reference_exon_boundary r_type="cDNA" r_start="375" r_stop="819" r_length="445" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E693389" ref_strand="+">
        <total_alignment_score>0.958</total_alignment_score>
        <cumulative_length_of_scored_exons>819</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E693389" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107556" e_stop="107459"/>
          <exon e_start="106853" e_stop="106681"/>
          <exon e_start="106595" e_stop="106493"/>
          <exon e_start="106376" e_stop="105932"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAGGTACTTTCTTTTTTCTGTTAATTTTTCGTGTTTGGCTCTATTGCAATTCGAGCTCCTGATGTACGCCTATGTGTGAACTGTTTAGAGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAGGTTAGCTTGTGTTTATTGTTCGTCTTGGAGTTGTAGCATACTCGCATCATGTTTAATTTCAGTGCATTTGTGTTGTTAGTGTAATATGGGGCATGGTTTGATCTTCAATTTTGCAGTATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCAACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATATAGGCTACGTGCTGTTGTTTCAAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAAGTTTGCACGCTTACCGTCCAATCAATCCCTCTTA</genome_strand>
        <mrna_strand>GGGCAGCATGTGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCGGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAG.....................................................................................AGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGACGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAG....................................................................................................................TATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCATAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTTGCATTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTCAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATCCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCTACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATATAGGCTACTTTCTGTAGGGTCAAATAATAAATTATGTCTCCAAACATAATTTCAAAATGGGATTTTTAAGTTTGCACGCTTACCATTAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E734377" ref_strand="+" ref_description="SGN-E734377 [LB12CA09]">
      <seq>ctctgatgggcgggatgagggaacgagttgagttagcaacaaaatttgctgtaagttttgcagaaggaaaaatgcaagtgcgcggagagccagcctatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgactgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaattaaatatataggtctatcagaggcttcagcatcaacaattagaagagcacatgcagttcatccaataacagcggttcaattagaatggtctctatggtcaagagatgtagaggaagacatagtccctacttgcagagaacttggaatcgggattgtagcatacagtccactagggcgtggctttttatcatccggtccaaagctgcttgaggactgctcaaatgaagatttccgaaagtatctaccgaggttccagggcgagaatcttgagcacaacaaaaaactgtatgagaggatttgtcaaattgcagctaagaagggatgcaccccgtctcaactggcgttggcgtgggtacatcaccaaggaaacgacgtgtgtcccattcctggcaccactaagattgaaaacttaaaccagaacattggagctctgtccataaagcttacttctgaagacatgacagagcttgaatctattgcttcagctaatgcagtccagggtgataggtacggttcggctgcggncacctacaaagattcagaaactccacccctttcagcatgggaggctacataaatataggctacgtgctgttgttttcaataataaattatgtctccaaacataatttgaacttgcaatttttaagtttgcacgcttaccgtcccaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="107958" stop="105641"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="107658" g_stop="107459" g_length="200"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="200" r_length="200" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="107458" i_stop="106854" i_length="605">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="106853" g_stop="106681" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="201" r_stop="373" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="106680" i_stop="106596" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.440" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106595" g_stop="106493" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="374" r_stop="476" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106492" i_stop="106377" i_length="116">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106376" g_stop="105940" g_length="437"/>
          <reference_exon_boundary r_type="cDNA" r_start="477" r_stop="913" r_length="437" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E734377" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>913</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E734377" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="107658" e_stop="107459"/>
          <exon e_start="106853" e_stop="106681"/>
          <exon e_start="106595" e_stop="106493"/>
          <exon e_start="106376" e_stop="105940"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAGGTACTTTCTTTTTTCTGTTAATTTTTCGTGTTTGGCTCTATTGCAATTCGAGCTCCTGATGTACGCCTATGTGTGAACTGTTTAGAGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAGGTTAGCTTGTGTTTATTGTTCGTCTTGGAGTTGTAGCATACTCGCATCATGTTTAATTTCAGTGCATTTGTGTTGTTAGTGTAATATGGGGCATGGTTTGATCTTCAATTTTGCAGTATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCAACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATATAGGCTACGTGCTGTTGTTTCAAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAAGTTTGCACGCTTACCGTCCAATCAAT</genome_strand>
        <mrna_strand>CTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAG.....................................................................................AGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAG....................................................................................................................TATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGNCACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGGAGGCTACATAAATATAGGCTACGTGCTGTTGTTTTCAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAAGTTTGCACGCTTACCGTCCCAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E416927" ref_strand="-" ref_description="SGN-E416927 [STM-24-E19]">
      <seq>tcagcatcaacaattagaagagcacatgttgttcatccaataacagcgggtacaattagaatggtctctatggtcgagagatgtagaggaagaaatagtccctacttgcagagaacttggaatcgggattgtagcatacagtccactagggcgtggatttttgtcatctggaccaaagcttcttgaggactgctcaaatgaagatttccgaaagtatctaccgaggttccagggcgagaatcttgagcataacaaaaaactgtatgagaggatttgtgaaatggcagctaagaagggatgcaccccgtctcaactcgcattggcctgggtacatcaccaaggaaacgacgtgtgtcccatcccgggcaccactaagattgaaaacttaaaccagaacattggagctctgtccataatgcttacttcagaagacatggcagagcttgaatccattgcttcagctaatgcagtccagggtgataggtacggttcggctgcggctacctacaaagattcagaaactccacccctttcagcatggaaggctacataaatgatgagttattcttgtgttgtgaaatgtatccaatgagaaacttatttttttttctgtttcaaaactattgtgttacttgctgttgtttcaaataataaattatgtgtccaaacataatttgaacttgcaacttttaaatttgaacatgcttgccatttgatcaaaaaaaaaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111285" stop="105658"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110985" g_stop="110876" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="111" r_length="111" r_score="0.936"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.923" a_score="0.90"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110784" g_stop="110682" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="112" r_stop="214" r_length="103" r_score="0.883"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96">
            <donor d_prob="0.985" d_score="0.86"/>
            <acceptor a_prob="0.916" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110585" g_stop="110177" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="215" r_stop="627" r_length="413" r_score="0.902"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110176" i_stop="106032" i_length="4145">
            <donor d_prob="0.000" d_score="0.67"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106031" g_stop="105958" g_length="74"/>
          <reference_exon_boundary r_type="cDNA" r_start="628" r_stop="701" r_length="74" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="719" polyA_stop="737"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E416927" ref_strand="-">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>696</cumulative_length_of_scored_exons>
        <coverage percentage="0.944" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E416927" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="110985" e_stop="110876"/>
          <exon e_start="110784" e_stop="110682"/>
          <exon e_start="110585" e_stop="110177"/>
          <exon e_start="106031" e_stop="105958"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGC-AGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAGGTACTTTTTTTCTTCTTTCTGTTAGTTTTTTTTGTGTTTGAGGTTTATACCAATGTGAGATCCTGATTTTTCCCGTCTGTTAACTGTTCAGAGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAGGTTCAGATTATATTTATTGTTTGTTTTGAGGTCCAATATGTTCACATTATGTTTAATTGCAGTGCATTTGACTTGAAAAGATCTCCAACTTTGCAGCATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAG---GTT-TCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGACTTTTTCCTATGGAGTAAAATATTGATATCTATTGGCTTTCTATTTAGTTATGCATAAATTAGTTATATTTCTGTTAGTTATTCGATTTTCTATATGTAACTTTTACTAAATTCAGATTTGCATAAAGTTACAGAAACAATTTCACATGCAAAATTCGAACATAACTAATTTAGATTTGTACAAAGTTACGAAGTGATTTCATATTCAAAGTTCAAATATACGTACTTTGCAAAAAATTTACAAAAGCGATTTCATATCCATACTGATTCAAATTTGCACAAAGTTACAAAAATGATTCCATAGCCGAGATTCAAAGTTCAAATATACATACTAATTTAAATTTGCATAAAAGTTATTTCATATACAAGATTAGAACGAACATAAATATTCAAATTCACGTAAAGTTATATAAACGATTTCATATCCAGAATTCAATCCTACACAATAATTTAAATTTACACAAATTTATAAAAACAATTTTATATTCGGGATTCGAACTTTCCGAATGAAAGATTAACACATAACCACAACTTTGGTGTTTGTCATTTGTCAATACCATATCTAATTAGCAACCTCTATATATACAAAACAATATCCACTTGCTCAATTATGTGCATATTTGCAGAGTAGTAAGCTTAAGCTGAATCACAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGTACTTAACTTCTTAATTTTTGGGATTTTCTCTGCCTTTTATGCATTGATTATTGTACGCTATGCTTGTTGATTTTGGAATCTTGGTGTTTGAGCTGGAATTGTTGTAACATATGCAAATGTGCTGGTTCATAAAGCTTAAAAGGCTTGCACTTTTCGCATCCTTGTAGCCTAGGGATCTGTTAAATGAGTCGAGAACATGAGGTTTAAGGTTCAGCTAAGACACCATGGTTATCAATAAAAAAGAAAAGACTCTACTTTTTGTTTTAGGTTGAATTGGGTTGGATTTGGTGCTATTCTTTACACGTTTTAGCTCCTTTGAGGTGGACCTTAGCAAGAAATGTTGTTCATGGTTCTTCAAAACATGTATATCTTTTGGAGGTGTTGACCTAAGTTGCTCGGACTCAGGTGCGGGTGTCCGATACGTGTGTGGATCTAAAGGTCGGATTCATCATGATCGATCTAATTTTTAAGATTCAGGAATATGGATCCATATGAGTGCGGGGACTCGCCTAAAAATAATTAGAATATTTAAAAAATAGAGCTATAAAACCTAAATTATGAGATATTATGTGGAGAACTTGAGGAGAATCCAGGAAGGAGATCAAAGGAAAAGGAGGGATATCGAAATTTCTATATAAAAGGTATTCCATTTCCTTCAATTTCACCTTAGCTTTTGTATTGATTACAAAAATCATTAAAATTGTCCAGACTTTCCCCATCGATTTTGGTCAAAATACCCAAAATCGGTTGACCGAATCGGACACAGATCCCTCACTTTCACCCATGCGGCACCAAAAGTGAAGAGTCTGAGCAACTTAGGTGTTGAGAAAGGCGAATTCAAAATTTGAAACTTAATGGGTTCGCACCAAAATTTTATCATTTGCCGTCTAATTTAGTGGTTCAAAAATCTATTACTTGTACTAATTTATTGAGCTTTTTAACGCATATAGATGGTCTAAGCCAAAGCTATTGGGTTCGGATGAGTCCATAGGTTCTTTACTAGGTCCTCCCTGGGTGTTCGGGATGGTTTTCCCTGGGTGCTTGAAATTTGAAGGTTCCAATGAAGTCAGTGCTAGTATGCAGAGTTTATCTTTACTTGTAATAGCTAGTTCCAACAATTTCATTCTTAATATGCTAAATAATCTGATTATTTAGATGCTAAAATCTATCGAGGTCAGGATAAGGGCAAATGTAGCGAGAATCGAAGTGAAATGACAGAAAACGGAAAGCTCAGAGACAGAATTGTTTTATTGTTGAACCACTGTCCAGTCGAAAAAGAAAAGAAACCTCTTGTCGATACAAAGTCAGCCAAGTCTAAGAACAAGAATACAAGTAATGAAAGAAAGAGCTTTAGTGAGTGTTATGTAGTAGTTGCAGTGAATAATTGATGATTGATGTCCTTGTTTGTAGGGATGAGGCTCCTTTTACAGGGTAAAGAAGAGGGTCTCTATGTAATTTTTTAATTCTTTTTTCAAATGATGAGAGTCATGGTCAGTTGCTAAGAGCGTGGCTGTCGGTTCTTGGGTTGGTTGAGAGTCTGTTGGTCCTCAAGGTTATATGATAATCAATGATCATTGTATTTATGCAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAGGTACTTTCTTTTTTCTGTTAATTTTTCGTGTTTGGCTCTATTGCAATTCGAGCTCCTGATGTACGCCTATGTGTGAACTGTTTAGAGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAGGTTAGCTTGTGTTTATTGTTCGTCTTGGAGTTGTAGCATACTCGCATCATGTTTAATTTCAGTGCATTTGTGTTGTTAGTGTAATATGGGGCATGGTTTGATCTTCAATTTTGCAGTATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCAACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATATAGGCTACGTGCTGTTGTTTCAAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAAGTTTGCAC</genome_strand>
        <mrna_strand>TCAGCATCAACAATTAGAAGAGCACATGTTGTTCATCCAATAACAGCGGGTACAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGAAATAGTCCCTACTTGCAG...........................................................................................AGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGATTTTTGTCATCTGGACCAAAGCTTCTTGAGGACTGCTCAAATGAAGATTTCCGAAAG................................................................................................TATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCATAACAAAAAACTGTATGAGAGGATTTGTGAAATGGCAGCTAAGAAGGGATGCACCCCGTCTCAACTCGCATTGGCCTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAATGCTTACTTCAGAAGACATGGCAGAGCTTGAATCCATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCTACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATGATGAGTTATTCTTGTGTTGTGAAATGTATCCAATGAGAAACTTATTTTTTTTTCTGTTTCAAAACTATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTTGCTGTTGTTTCAAATAATAAATTATGTGTCCAAACATAATTTGAACTTGCAACTTTTAAATTTGAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E417344" ref_strand="-" ref_description="SGN-E417344 [STM-25-C18]">
      <seq>cgggattgtagcatacagtccactagggcgtggatttttgtcatctggaccaaagcttcttgaggactgctcaaatgaagatttccgaaagtatctaccgaggttccagggcgagaatcttgagcataacaaaaaactgtatgagaggatttgtgaaatggcagctaagaagggatgcaccccgtctcaactcgcattggcctgggtacatcaccaaggaaacgacgtgtgtcccatcccgggcaccactaagattgaaaacttaaaccagaacattggagctctgtccataatgcttacttcagaagacatggcagagcttgaatccattgcttcagctaatgcagtccagggtgataggtacggttcggctgcggctacctacaaagattcagaaactccacccctttcagcatggaaggctacataaatgatgagttattcttgtgttgtgaaatgtatccaatgagaaacttatttttttttctgtttcaaaactattgtgttacttgctgttgtttcaaataataaattatgtgtccaaacataatttgaacttgcaacttttaaatttgaaaatgcttgccatttgatcaaaaaaaaaagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111071" stop="105659"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110772" g_stop="110682" g_length="91"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="91" r_length="91" r_score="0.879"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96">
            <donor d_prob="0.985" d_score="0.86"/>
            <acceptor a_prob="0.916" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110585" g_stop="110177" g_length="409"/>
          <reference_exon_boundary r_type="cDNA" r_start="92" r_stop="504" r_length="413" r_score="0.902"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110176" i_stop="106032" i_length="4145">
            <donor d_prob="0.000" d_score="0.67"/>
            <acceptor a_prob="0.000" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106031" g_stop="105966" g_length="66"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="570" r_length="66" r_score="0.939"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="596" polyA_stop="606"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E417344" ref_strand="-">
        <total_alignment_score>0.903</total_alignment_score>
        <cumulative_length_of_scored_exons>566</cumulative_length_of_scored_exons>
        <coverage percentage="0.932" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E417344" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="110772" e_stop="110682"/>
          <exon e_start="110585" e_stop="110177"/>
          <exon e_start="106031" e_stop="105966"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAGGTTCAGATTATATTTATTGTTTGTTTTGAGGTCCAATATGTTCACATTATGTTTAATTGCAGTGCATTTGACTTGAAAAGATCTCCAACTTTGCAGCATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAG---GTT-TCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGACTTTTTCCTATGGAGTAAAATATTGATATCTATTGGCTTTCTATTTAGTTATGCATAAATTAGTTATATTTCTGTTAGTTATTCGATTTTCTATATGTAACTTTTACTAAATTCAGATTTGCATAAAGTTACAGAAACAATTTCACATGCAAAATTCGAACATAACTAATTTAGATTTGTACAAAGTTACGAAGTGATTTCATATTCAAAGTTCAAATATACGTACTTTGCAAAAAATTTACAAAAGCGATTTCATATCCATACTGATTCAAATTTGCACAAAGTTACAAAAATGATTCCATAGCCGAGATTCAAAGTTCAAATATACATACTAATTTAAATTTGCATAAAAGTTATTTCATATACAAGATTAGAACGAACATAAATATTCAAATTCACGTAAAGTTATATAAACGATTTCATATCCAGAATTCAATCCTACACAATAATTTAAATTTACACAAATTTATAAAAACAATTTTATATTCGGGATTCGAACTTTCCGAATGAAAGATTAACACATAACCACAACTTTGGTGTTTGTCATTTGTCAATACCATATCTAATTAGCAACCTCTATATATACAAAACAATATCCACTTGCTCAATTATGTGCATATTTGCAGAGTAGTAAGCTTAAGCTGAATCACAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGTACTTAACTTCTTAATTTTTGGGATTTTCTCTGCCTTTTATGCATTGATTATTGTACGCTATGCTTGTTGATTTTGGAATCTTGGTGTTTGAGCTGGAATTGTTGTAACATATGCAAATGTGCTGGTTCATAAAGCTTAAAAGGCTTGCACTTTTCGCATCCTTGTAGCCTAGGGATCTGTTAAATGAGTCGAGAACATGAGGTTTAAGGTTCAGCTAAGACACCATGGTTATCAATAAAAAAGAAAAGACTCTACTTTTTGTTTTAGGTTGAATTGGGTTGGATTTGGTGCTATTCTTTACACGTTTTAGCTCCTTTGAGGTGGACCTTAGCAAGAAATGTTGTTCATGGTTCTTCAAAACATGTATATCTTTTGGAGGTGTTGACCTAAGTTGCTCGGACTCAGGTGCGGGTGTCCGATACGTGTGTGGATCTAAAGGTCGGATTCATCATGATCGATCTAATTTTTAAGATTCAGGAATATGGATCCATATGAGTGCGGGGACTCGCCTAAAAATAATTAGAATATTTAAAAAATAGAGCTATAAAACCTAAATTATGAGATATTATGTGGAGAACTTGAGGAGAATCCAGGAAGGAGATCAAAGGAAAAGGAGGGATATCGAAATTTCTATATAAAAGGTATTCCATTTCCTTCAATTTCACCTTAGCTTTTGTATTGATTACAAAAATCATTAAAATTGTCCAGACTTTCCCCATCGATTTTGGTCAAAATACCCAAAATCGGTTGACCGAATCGGACACAGATCCCTCACTTTCACCCATGCGGCACCAAAAGTGAAGAGTCTGAGCAACTTAGGTGTTGAGAAAGGCGAATTCAAAATTTGAAACTTAATGGGTTCGCACCAAAATTTTATCATTTGCCGTCTAATTTAGTGGTTCAAAAATCTATTACTTGTACTAATTTATTGAGCTTTTTAACGCATATAGATGGTCTAAGCCAAAGCTATTGGGTTCGGATGAGTCCATAGGTTCTTTACTAGGTCCTCCCTGGGTGTTCGGGATGGTTTTCCCTGGGTGCTTGAAATTTGAAGGTTCCAATGAAGTCAGTGCTAGTATGCAGAGTTTATCTTTACTTGTAATAGCTAGTTCCAACAATTTCATTCTTAATATGCTAAATAATCTGATTATTTAGATGCTAAAATCTATCGAGGTCAGGATAAGGGCAAATGTAGCGAGAATCGAAGTGAAATGACAGAAAACGGAAAGCTCAGAGACAGAATTGTTTTATTGTTGAACCACTGTCCAGTCGAAAAAGAAAAGAAACCTCTTGTCGATACAAAGTCAGCCAAGTCTAAGAACAAGAATACAAGTAATGAAAGAAAGAGCTTTAGTGAGTGTTATGTAGTAGTTGCAGTGAATAATTGATGATTGATGTCCTTGTTTGTAGGGATGAGGCTCCTTTTACAGGGTAAAGAAGAGGGTCTCTATGTAATTTTTTAATTCTTTTTTCAAATGATGAGAGTCATGGTCAGTTGCTAAGAGCGTGGCTGTCGGTTCTTGGGTTGGTTGAGAGTCTGTTGGTCCTCAAGGTTATATGATAATCAATGATCATTGTATTTATGCAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAGGTACTTTCTTTTTTCTGTTAATTTTTCGTGTTTGGCTCTATTGCAATTCGAGCTCCTGATGTACGCCTATGTGTGAACTGTTTAGAGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAGGTTAGCTTGTGTTTATTGTTCGTCTTGGAGTTGTAGCATACTCGCATCATGTTTAATTTCAGTGCATTTGTGTTGTTAGTGTAATATGGGGCATGGTTTGATCTTCAATTTTGCAGTATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCAACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATATAGGCTACGTGCTGTTGTTTCAAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAA</genome_strand>
        <mrna_strand>CGGGATTGTAGCATACAGTCCACTAGGGCGTGGATTTTTGTCATCTGGACCAAAGCTTCTTGAGGACTGCTCAAATGAAGATTTCCGAAAG................................................................................................TATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCATAACAAAAAACTGTATGAGAGGATTTGTGAAATGGCAGCTAAGAAGGGATGCACCCCGTCTCAACTCGCATTGGCCTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAATGCTTACTTCAGAAGACATGGCAGAGCTTGAATCCATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCTACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATGATGAGTTATTCTTGTGTTGTGAAATGTATCCAATGAGAAACTTATTTTTTTTTCTGTTTCAAAACTATTGT.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTACTTGCTGTTGTTTCAAATAATAAATTATGTGTCCAAACATAATTTGAACTTGCAACTTTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E548993" ref_strand="+" ref_description="SGN-E548993 [TUS-66-F2]">
      <seq>caacaatggcggcagagggaacaaaagtgggaagaatcaaattgggttcagagggtcttgaagtatctgctcaaggacttggttgtatgggtatgtccgctttttacgggcctcccaaacccgattccgatatggtccaactcatccaccacgccattaactccggcgtcacatttctcgatacttccgatgtatatgggccccacactaatgaaatcctcctcggcaaggctctgatgggcgggatgagggaacgagttgagttagcaacaaaatttgctgtaagttttgcagaaggaaaaatgcaagtgcgcggagagccagcctatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgactgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaattaaatatataggtctatcagaggcttcagcatcaacaattagaagagcacatgcagttcatccaataacagcggttcaattagaatggtctctatggtcaagagatgtagaggaagacatagtccctacttgcagagaacttggaatcgggattgtagcatacagtccactagggcgtggctttttatcatccggtccaaagctgcttgaggactgctcaaatgaagatttccgaaagtatctaccgaggttccagggcgagaatcttgagcacaacaaaaaactgtatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="109779" stop="106025"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109479" g_stop="109250" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109249" i_stop="107660" i_length="1590">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107659" g_stop="107459" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="431" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107458" i_stop="106854" i_length="605">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106853" g_stop="106681" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="604" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106680" i_stop="106596" i_length="85">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.440" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106595" g_stop="106493" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="707" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="106492" i_stop="106377" i_length="116">
            <donor d_prob="0.986" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="106376" g_stop="106325" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="708" r_stop="759" r_length="52" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E548993" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>759</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E548993" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109479" e_stop="109250"/>
          <exon e_start="107659" e_stop="107459"/>
          <exon e_start="106853" e_stop="106681"/>
          <exon e_start="106595" e_stop="106493"/>
          <exon e_start="106376" e_stop="106325"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGTACTTAACTTCTTAATTTTTGGGATTTTCTCTGCCTTTTATGCATTGATTATTGTACGCTATGCTTGTTGATTTTGGAATCTTGGTGTTTGAGCTGGAATTGTTGTAACATATGCAAATGTGCTGGTTCATAAAGCTTAAAAGGCTTGCACTTTTCGCATCCTTGTAGCCTAGGGATCTGTTAAATGAGTCGAGAACATGAGGTTTAAGGTTCAGCTAAGACACCATGGTTATCAATAAAAAAGAAAAGACTCTACTTTTTGTTTTAGGTTGAATTGGGTTGGATTTGGTGCTATTCTTTACACGTTTTAGCTCCTTTGAGGTGGACCTTAGCAAGAAATGTTGTTCATGGTTCTTCAAAACATGTATATCTTTTGGAGGTGTTGACCTAAGTTGCTCGGACTCAGGTGCGGGTGTCCGATACGTGTGTGGATCTAAAGGTCGGATTCATCATGATCGATCTAATTTTTAAGATTCAGGAATATGGATCCATATGAGTGCGGGGACTCGCCTAAAAATAATTAGAATATTTAAAAAATAGAGCTATAAAACCTAAATTATGAGATATTATGTGGAGAACTTGAGGAGAATCCAGGAAGGAGATCAAAGGAAAAGGAGGGATATCGAAATTTCTATATAAAAGGTATTCCATTTCCTTCAATTTCACCTTAGCTTTTGTATTGATTACAAAAATCATTAAAATTGTCCAGACTTTCCCCATCGATTTTGGTCAAAATACCCAAAATCGGTTGACCGAATCGGACACAGATCCCTCACTTTCACCCATGCGGCACCAAAAGTGAAGAGTCTGAGCAACTTAGGTGTTGAGAAAGGCGAATTCAAAATTTGAAACTTAATGGGTTCGCACCAAAATTTTATCATTTGCCGTCTAATTTAGTGGTTCAAAAATCTATTACTTGTACTAATTTATTGAGCTTTTTAACGCATATAGATGGTCTAAGCCAAAGCTATTGGGTTCGGATGAGTCCATAGGTTCTTTACTAGGTCCTCCCTGGGTGTTCGGGATGGTTTTCCCTGGGTGCTTGAAATTTGAAGGTTCCAATGAAGTCAGTGCTAGTATGCAGAGTTTATCTTTACTTGTAATAGCTAGTTCCAACAATTTCATTCTTAATATGCTAAATAATCTGATTATTTAGATGCTAAAATCTATCGAGGTCAGGATAAGGGCAAATGTAGCGAGAATCGAAGTGAAATGACAGAAAACGGAAAGCTCAGAGACAGAATTGTTTTATTGTTGAACCACTGTCCAGTCGAAAAAGAAAAGAAACCTCTTGTCGATACAAAGTCAGCCAAGTCTAAGAACAAGAATACAAGTAATGAAAGAAAGAGCTTTAGTGAGTGTTATGTAGTAGTTGCAGTGAATAATTGATGATTGATGTCCTTGTTTGTAGGGATGAGGCTCCTTTTACAGGGTAAAGAAGAGGGTCTCTATGTAATTTTTTAATTCTTTTTTCAAATGATGAGAGTCATGGTCAGTTGCTAAGAGCGTGGCTGTCGGTTCTTGGGTTGGTTGAGAGTCTGTTGGTCCTCAAGGTTATATGATAATCAATGATCATTGTATTTATGCAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAGGTACTTTCTTTTTTCTGTTAATTTTTCGTGTTTGGCTCTATTGCAATTCGAGCTCCTGATGTACGCCTATGTGTGAACTGTTTAGAGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAGGTTAGCTTGTGTTTATTGTTCGTCTTGGAGTTGTAGCATACTCGCATCATGTTTAATTTCAGTGCATTTGTGTTGTTAGTGTAATATGGGGCATGGTTTGATCTTCAATTTTGCAGTATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATG</genome_strand>
        <mrna_strand>CAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAG.....................................................................................AGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAG....................................................................................................................TATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E482821" ref_strand="+" ref_description="SGN-E482821 [cSTE-5-O12]">
      <seq>caacaatggcggcagagggaacaaaagtgggaagaatgaaattgggttcagagggatttgaagtatctgctcaaggacttggttgtatgggtatgtccgctttttacgggccgcccaaacccgaacccgatatgatccaactcatccaccacgccattaactccggcgtcacttttctcgatacttccgatgtatatggaccccacactaacgagatcctccttggcaaggctctgaagggcgggatgagggaacgagttgagttagcaacaaaatttgctgtaagttttgcagatggaacaatgcaagtgcgcggagagccagcctatgtaagggaagcatgcgaggctagcttaaagcgacttgatgttgactgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaattaaatatataggtctatctgaggcttcagcatcaacaattagaagagcacatgctgttcatccaataacagcggtacaattagaatggtctctatggtcgagagatgtagaggaagaaataatccctacttgcagagaacttggaatcgggattgtagcatacagtccactanggcgtggatttttgtcatccggaccaaagcttctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="109779" stop="106223"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109479" g_stop="109250" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="230" r_length="230" r_score="0.948"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109249" i_stop="107660" i_length="1590">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107659" g_stop="107459" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="231" r_stop="431" r_length="201" r_score="0.980"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107458" i_stop="106854" i_length="605">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106853" g_stop="106681" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="432" r_stop="604" r_length="173" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106680" i_stop="106596" i_length="85">
            <donor d_prob="0.999" d_score="0.94"/>
            <acceptor a_prob="0.440" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106595" g_stop="106523" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="605" r_stop="677" r_length="73" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E482821" ref_strand="+">
        <total_alignment_score>0.960</total_alignment_score>
        <cumulative_length_of_scored_exons>677</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E482821" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109479" e_stop="109250"/>
          <exon e_start="107659" e_stop="107459"/>
          <exon e_start="106853" e_stop="106681"/>
          <exon e_start="106595" e_stop="106523"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGTACTTAACTTCTTAATTTTTGGGATTTTCTCTGCCTTTTATGCATTGATTATTGTACGCTATGCTTGTTGATTTTGGAATCTTGGTGTTTGAGCTGGAATTGTTGTAACATATGCAAATGTGCTGGTTCATAAAGCTTAAAAGGCTTGCACTTTTCGCATCCTTGTAGCCTAGGGATCTGTTAAATGAGTCGAGAACATGAGGTTTAAGGTTCAGCTAAGACACCATGGTTATCAATAAAAAAGAAAAGACTCTACTTTTTGTTTTAGGTTGAATTGGGTTGGATTTGGTGCTATTCTTTACACGTTTTAGCTCCTTTGAGGTGGACCTTAGCAAGAAATGTTGTTCATGGTTCTTCAAAACATGTATATCTTTTGGAGGTGTTGACCTAAGTTGCTCGGACTCAGGTGCGGGTGTCCGATACGTGTGTGGATCTAAAGGTCGGATTCATCATGATCGATCTAATTTTTAAGATTCAGGAATATGGATCCATATGAGTGCGGGGACTCGCCTAAAAATAATTAGAATATTTAAAAAATAGAGCTATAAAACCTAAATTATGAGATATTATGTGGAGAACTTGAGGAGAATCCAGGAAGGAGATCAAAGGAAAAGGAGGGATATCGAAATTTCTATATAAAAGGTATTCCATTTCCTTCAATTTCACCTTAGCTTTTGTATTGATTACAAAAATCATTAAAATTGTCCAGACTTTCCCCATCGATTTTGGTCAAAATACCCAAAATCGGTTGACCGAATCGGACACAGATCCCTCACTTTCACCCATGCGGCACCAAAAGTGAAGAGTCTGAGCAACTTAGGTGTTGAGAAAGGCGAATTCAAAATTTGAAACTTAATGGGTTCGCACCAAAATTTTATCATTTGCCGTCTAATTTAGTGGTTCAAAAATCTATTACTTGTACTAATTTATTGAGCTTTTTAACGCATATAGATGGTCTAAGCCAAAGCTATTGGGTTCGGATGAGTCCATAGGTTCTTTACTAGGTCCTCCCTGGGTGTTCGGGATGGTTTTCCCTGGGTGCTTGAAATTTGAAGGTTCCAATGAAGTCAGTGCTAGTATGCAGAGTTTATCTTTACTTGTAATAGCTAGTTCCAACAATTTCATTCTTAATATGCTAAATAATCTGATTATTTAGATGCTAAAATCTATCGAGGTCAGGATAAGGGCAAATGTAGCGAGAATCGAAGTGAAATGACAGAAAACGGAAAGCTCAGAGACAGAATTGTTTTATTGTTGAACCACTGTCCAGTCGAAAAAGAAAAGAAACCTCTTGTCGATACAAAGTCAGCCAAGTCTAAGAACAAGAATACAAGTAATGAAAGAAAGAGCTTTAGTGAGTGTTATGTAGTAGTTGCAGTGAATAATTGATGATTGATGTCCTTGTTTGTAGGGATGAGGCTCCTTTTACAGGGTAAAGAAGAGGGTCTCTATGTAATTTTTTAATTCTTTTTTCAAATGATGAGAGTCATGGTCAGTTGCTAAGAGCGTGGCTGTCGGTTCTTGGGTTGGTTGAGAGTCTGTTGGTCCTCAAGGTTATATGATAATCAATGATCATTGTATTTATGCAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAGGTACTTTCTTTTTTCTGTTAATTTTTCGTGTTTGGCTCTATTGCAATTCGAGCTCCTGATGTACGCCTATGTGTGAACTGTTTAGAGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTT</genome_strand>
        <mrna_strand>CAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATGAAATTGGGTTCAGAGGGATTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGATATGATCCAACTCATCCACCACGCCATTAACTCCGGCGTCACTTTTCTCGATACTTCCGATGTATATGGACCCCACACTAACGAGATCCTCCTTGGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAAGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGATGGAACAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGAAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCTGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCTGTTCATCCAATAACAGCGGTACAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG.....................................................................................AGAACTTGGAATCGGGATTGTAGCATACAGTCCACTANGGCGTGGATTTTTGTCATCCGGACCAAAGCTTCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E417343" ref_strand="+" ref_description="SGN-E417343 [STM-25-C18]">
      <seq>tgcgccccaaaacccgaacccgatatgatccaactcatccaccacgccattaactccggcgtcacttttctcgataccttccgatgtatatggaccccacacctaacgagatcctccttggcaaggctctgaagggcgggataagggaacgagttgagttagcaacaaaatttgctgtatgttttgcagatggaaaaatgcaagtgcgcggagagccagcctatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgactgcatagacttgtactaccagcaccggattgatacacgtgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaattaaatatataggtctatcggaggcttcagcatcaacaattagaagagcacatgttgttcatccaataacagcggtacaattagaatggtctctatggtcgagagatgtagaggaagaaatagtccctacttgcagagaacttggaatcgggattgtagcatacagtccactaaggcgtggattttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="109672" stop="106245"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109373" g_stop="109250" g_length="124"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="0.871"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109249" i_stop="107660" i_length="1590">
            <donor d_prob="1.000" d_score="0.83"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107659" g_stop="107459" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="326" r_length="201" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107458" i_stop="106854" i_length="605">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106853" g_stop="106681" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="327" r_stop="499" r_length="173" r_score="0.965"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="106680" i_stop="106596" i_length="85">
            <donor d_prob="0.999" d_score="0.96"/>
            <acceptor a_prob="0.440" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="106595" g_stop="106545" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="500" r_stop="550" r_length="51" r_score="0.961"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E417343" ref_strand="+">
        <total_alignment_score>0.947</total_alignment_score>
        <cumulative_length_of_scored_exons>549</cumulative_length_of_scored_exons>
        <coverage percentage="0.998" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E417343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109373" e_stop="109250"/>
          <exon e_start="107659" e_stop="107459"/>
          <exon e_start="106853" e_stop="106681"/>
          <exon e_start="106595" e_stop="106545"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATA-CTTCCGATGTATATGGGCCCCACA-CTAATGAAATCCTCCTCGGCAAGGTACTTAACTTCTTAATTTTTGGGATTTTCTCTGCCTTTTATGCATTGATTATTGTACGCTATGCTTGTTGATTTTGGAATCTTGGTGTTTGAGCTGGAATTGTTGTAACATATGCAAATGTGCTGGTTCATAAAGCTTAAAAGGCTTGCACTTTTCGCATCCTTGTAGCCTAGGGATCTGTTAAATGAGTCGAGAACATGAGGTTTAAGGTTCAGCTAAGACACCATGGTTATCAATAAAAAAGAAAAGACTCTACTTTTTGTTTTAGGTTGAATTGGGTTGGATTTGGTGCTATTCTTTACACGTTTTAGCTCCTTTGAGGTGGACCTTAGCAAGAAATGTTGTTCATGGTTCTTCAAAACATGTATATCTTTTGGAGGTGTTGACCTAAGTTGCTCGGACTCAGGTGCGGGTGTCCGATACGTGTGTGGATCTAAAGGTCGGATTCATCATGATCGATCTAATTTTTAAGATTCAGGAATATGGATCCATATGAGTGCGGGGACTCGCCTAAAAATAATTAGAATATTTAAAAAATAGAGCTATAAAACCTAAATTATGAGATATTATGTGGAGAACTTGAGGAGAATCCAGGAAGGAGATCAAAGGAAAAGGAGGGATATCGAAATTTCTATATAAAAGGTATTCCATTTCCTTCAATTTCACCTTAGCTTTTGTATTGATTACAAAAATCATTAAAATTGTCCAGACTTTCCCCATCGATTTTGGTCAAAATACCCAAAATCGGTTGACCGAATCGGACACAGATCCCTCACTTTCACCCATGCGGCACCAAAAGTGAAGAGTCTGAGCAACTTAGGTGTTGAGAAAGGCGAATTCAAAATTTGAAACTTAATGGGTTCGCACCAAAATTTTATCATTTGCCGTCTAATTTAGTGGTTCAAAAATCTATTACTTGTACTAATTTATTGAGCTTTTTAACGCATATAGATGGTCTAAGCCAAAGCTATTGGGTTCGGATGAGTCCATAGGTTCTTTACTAGGTCCTCCCTGGGTGTTCGGGATGGTTTTCCCTGGGTGCTTGAAATTTGAAGGTTCCAATGAAGTCAGTGCTAGTATGCAGAGTTTATCTTTACTTGTAATAGCTAGTTCCAACAATTTCATTCTTAATATGCTAAATAATCTGATTATTTAGATGCTAAAATCTATCGAGGTCAGGATAAGGGCAAATGTAGCGAGAATCGAAGTGAAATGACAGAAAACGGAAAGCTCAGAGACAGAATTGTTTTATTGTTGAACCACTGTCCAGTCGAAAAAGAAAAGAAACCTCTTGTCGATACAAAGTCAGCCAAGTCTAAGAACAAGAATACAAGTAATGAAAGAAAGAGCTTTAGTGAGTGTTATGTAGTAGTTGCAGTGAATAATTGATGATTGATGTCCTTGTTTGTAGGGATGAGGCTCCTTTTACAGGGTAAAGAAGAGGGTCTCTATGTAATTTTTTAATTCTTTTTTCAAATGATGAGAGTCATGGTCAGTTGCTAAGAGCGTGGCTGTCGGTTCTTGGGTTGGTTGAGAGTCTGTTGGTCCTCAAGGTTATATGATAATCAATGATCATTGTATTTATGCAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAGGTACTTTCTTTTTTCTGTTAATTTTTCGTGTTTGGCTCTATTGCAATTCGAGCTCCTGATGTACGCCTATGTGTGAACTGTTTAGAGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTT</genome_strand>
        <mrna_strand>TGCGCC-CCAAAACCCGAACCCGATATGATCCAACTCATCCACCACGCCATTAACTCCGGCGTCACTTTTCTCGATACCTTCCGATGTATATGGACCCCACACCTAACGAGATCCTCCTTGGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAAGGGCGGGATAAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTATGTTTTGCAGATGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGTGTGCCCATTGAAGTAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCGGAGGCTTCAGCATCAACAATTAGAAGAGCACATGTTGTTCATCCAATAACAGCGGTACAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGAAATAGTCCCTACTTGCAG.....................................................................................AGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAAGGCGTGGATTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E689549" ref_strand="+" ref_description="SGN-E689549 [LH_Ea01D03]">
      <seq>cacttcttaagctgaatcacaacaatggcggcagagggaacccctttgggaagaatcaaattgggttcagagggtcttgaagtatctgctcaaggacttggttgtatgggtatgtccgctttttacgggcctcccaaacccgattccgatatgggccaactcatccaccacgccattaactccggcgtcacatttctcgatacttccgatgtatatgggccccacactaatgaaatcctcctcggcaaggctctgatgggcgggatgagggaacgagttgagttagcaacaaaatttgctgtaagttttgcagaaggaaaaatgcaagtgcgcggagagccagcctatgtaagggcagcatgtgaggctagcttaaagcgacttgatgttgactgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtgacggttggagaacttaagaagctggttgaagagggtaaaattaaatatataggtctatcggaggcttcagcatcaacaattagaagagcacatgcagttcatccaataacagcggttcaattagaatggtctctatggtcgagagatgtacaggaagacatagtccctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="109793" stop="106386"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109498" g_stop="109250" g_length="249"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="249" r_length="249" r_score="0.956"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109249" i_stop="107660" i_length="1590">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107659" g_stop="107459" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="250" r_stop="450" r_length="201" r_score="0.990"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107458" i_stop="106854" i_length="605">
            <donor d_prob="0.969" d_score="0.98"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106853" g_stop="106686" g_length="168"/>
          <reference_exon_boundary r_type="cDNA" r_start="451" r_stop="618" r_length="168" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E689549" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>618</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E689549" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109498" e_stop="109250"/>
          <exon e_start="107659" e_stop="107459"/>
          <exon e_start="106853" e_stop="106686"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTAAGCTTAAGCTGAATCACAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGTACTTAACTTCTTAATTTTTGGGATTTTCTCTGCCTTTTATGCATTGATTATTGTACGCTATGCTTGTTGATTTTGGAATCTTGGTGTTTGAGCTGGAATTGTTGTAACATATGCAAATGTGCTGGTTCATAAAGCTTAAAAGGCTTGCACTTTTCGCATCCTTGTAGCCTAGGGATCTGTTAAATGAGTCGAGAACATGAGGTTTAAGGTTCAGCTAAGACACCATGGTTATCAATAAAAAAGAAAAGACTCTACTTTTTGTTTTAGGTTGAATTGGGTTGGATTTGGTGCTATTCTTTACACGTTTTAGCTCCTTTGAGGTGGACCTTAGCAAGAAATGTTGTTCATGGTTCTTCAAAACATGTATATCTTTTGGAGGTGTTGACCTAAGTTGCTCGGACTCAGGTGCGGGTGTCCGATACGTGTGTGGATCTAAAGGTCGGATTCATCATGATCGATCTAATTTTTAAGATTCAGGAATATGGATCCATATGAGTGCGGGGACTCGCCTAAAAATAATTAGAATATTTAAAAAATAGAGCTATAAAACCTAAATTATGAGATATTATGTGGAGAACTTGAGGAGAATCCAGGAAGGAGATCAAAGGAAAAGGAGGGATATCGAAATTTCTATATAAAAGGTATTCCATTTCCTTCAATTTCACCTTAGCTTTTGTATTGATTACAAAAATCATTAAAATTGTCCAGACTTTCCCCATCGATTTTGGTCAAAATACCCAAAATCGGTTGACCGAATCGGACACAGATCCCTCACTTTCACCCATGCGGCACCAAAAGTGAAGAGTCTGAGCAACTTAGGTGTTGAGAAAGGCGAATTCAAAATTTGAAACTTAATGGGTTCGCACCAAAATTTTATCATTTGCCGTCTAATTTAGTGGTTCAAAAATCTATTACTTGTACTAATTTATTGAGCTTTTTAACGCATATAGATGGTCTAAGCCAAAGCTATTGGGTTCGGATGAGTCCATAGGTTCTTTACTAGGTCCTCCCTGGGTGTTCGGGATGGTTTTCCCTGGGTGCTTGAAATTTGAAGGTTCCAATGAAGTCAGTGCTAGTATGCAGAGTTTATCTTTACTTGTAATAGCTAGTTCCAACAATTTCATTCTTAATATGCTAAATAATCTGATTATTTAGATGCTAAAATCTATCGAGGTCAGGATAAGGGCAAATGTAGCGAGAATCGAAGTGAAATGACAGAAAACGGAAAGCTCAGAGACAGAATTGTTTTATTGTTGAACCACTGTCCAGTCGAAAAAGAAAAGAAACCTCTTGTCGATACAAAGTCAGCCAAGTCTAAGAACAAGAATACAAGTAATGAAAGAAAGAGCTTTAGTGAGTGTTATGTAGTAGTTGCAGTGAATAATTGATGATTGATGTCCTTGTTTGTAGGGATGAGGCTCCTTTTACAGGGTAAAGAAGAGGGTCTCTATGTAATTTTTTAATTCTTTTTTCAAATGATGAGAGTCATGGTCAGTTGCTAAGAGCGTGGCTGTCGGTTCTTGGGTTGGTTGAGAGTCTGTTGGTCCTCAAGGTTATATGATAATCAATGATCATTGTATTTATGCAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACT</genome_strand>
        <mrna_strand>CACTTCTTAAGCTGAATCACAACAATGGCGGCAGAGGGAACCCCTTTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGGCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGTGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTGACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCGGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCGAGAGATGTACAGGAAGACATAGTCCCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E306804" ref_strand="+" ref_description="SGN-E306804 [cLEY-11-C10]">
      <seq>aacaatggcggcagagggaacaaaagtgggaagaatcaaattgggttcagagggtcttgaagtatctgctcaaggacttggttgtatgggtatgtccgctttttacgggcctcccaaacccgattccgatatggtccaactcatccaccacgccattaactccggcgtcacatttctcgatacttccgatgtatatgggccccacactaatgaaatcctcctcggcaaggctctgatgggcgggatgagggaacgagttgagttagcaacaaaatttgctgtaagttttgcagaaggaaaaatgcaagtgcgcggagagccagcctatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgactgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaattaaatatataggtctatcagaggcttcagcatcaacaattagaagagcacatgcagttcatccaataacagcggttcaattagaatggtctctat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="109778" stop="106421"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109478" g_stop="109250" g_length="229"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="229" r_length="229" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109249" i_stop="107660" i_length="1590">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107659" g_stop="107459" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="230" r_stop="430" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107458" i_stop="106854" i_length="605">
            <donor d_prob="0.969" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="106853" g_stop="106721" g_length="133"/>
          <reference_exon_boundary r_type="cDNA" r_start="431" r_stop="563" r_length="133" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E306804" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>563</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E306804" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109478" e_stop="109250"/>
          <exon e_start="107659" e_stop="107459"/>
          <exon e_start="106853" e_stop="106721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGTACTTAACTTCTTAATTTTTGGGATTTTCTCTGCCTTTTATGCATTGATTATTGTACGCTATGCTTGTTGATTTTGGAATCTTGGTGTTTGAGCTGGAATTGTTGTAACATATGCAAATGTGCTGGTTCATAAAGCTTAAAAGGCTTGCACTTTTCGCATCCTTGTAGCCTAGGGATCTGTTAAATGAGTCGAGAACATGAGGTTTAAGGTTCAGCTAAGACACCATGGTTATCAATAAAAAAGAAAAGACTCTACTTTTTGTTTTAGGTTGAATTGGGTTGGATTTGGTGCTATTCTTTACACGTTTTAGCTCCTTTGAGGTGGACCTTAGCAAGAAATGTTGTTCATGGTTCTTCAAAACATGTATATCTTTTGGAGGTGTTGACCTAAGTTGCTCGGACTCAGGTGCGGGTGTCCGATACGTGTGTGGATCTAAAGGTCGGATTCATCATGATCGATCTAATTTTTAAGATTCAGGAATATGGATCCATATGAGTGCGGGGACTCGCCTAAAAATAATTAGAATATTTAAAAAATAGAGCTATAAAACCTAAATTATGAGATATTATGTGGAGAACTTGAGGAGAATCCAGGAAGGAGATCAAAGGAAAAGGAGGGATATCGAAATTTCTATATAAAAGGTATTCCATTTCCTTCAATTTCACCTTAGCTTTTGTATTGATTACAAAAATCATTAAAATTGTCCAGACTTTCCCCATCGATTTTGGTCAAAATACCCAAAATCGGTTGACCGAATCGGACACAGATCCCTCACTTTCACCCATGCGGCACCAAAAGTGAAGAGTCTGAGCAACTTAGGTGTTGAGAAAGGCGAATTCAAAATTTGAAACTTAATGGGTTCGCACCAAAATTTTATCATTTGCCGTCTAATTTAGTGGTTCAAAAATCTATTACTTGTACTAATTTATTGAGCTTTTTAACGCATATAGATGGTCTAAGCCAAAGCTATTGGGTTCGGATGAGTCCATAGGTTCTTTACTAGGTCCTCCCTGGGTGTTCGGGATGGTTTTCCCTGGGTGCTTGAAATTTGAAGGTTCCAATGAAGTCAGTGCTAGTATGCAGAGTTTATCTTTACTTGTAATAGCTAGTTCCAACAATTTCATTCTTAATATGCTAAATAATCTGATTATTTAGATGCTAAAATCTATCGAGGTCAGGATAAGGGCAAATGTAGCGAGAATCGAAGTGAAATGACAGAAAACGGAAAGCTCAGAGACAGAATTGTTTTATTGTTGAACCACTGTCCAGTCGAAAAAGAAAAGAAACCTCTTGTCGATACAAAGTCAGCCAAGTCTAAGAACAAGAATACAAGTAATGAAAGAAAGAGCTTTAGTGAGTGTTATGTAGTAGTTGCAGTGAATAATTGATGATTGATGTCCTTGTTTGTAGGGATGAGGCTCCTTTTACAGGGTAAAGAAGAGGGTCTCTATGTAATTTTTTAATTCTTTTTTCAAATGATGAGAGTCATGGTCAGTTGCTAAGAGCGTGGCTGTCGGTTCTTGGGTTGGTTGAGAGTCTGTTGGTCCTCAAGGTTATATGATAATCAATGATCATTGTATTTATGCAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTCTCTATATCACAACTCTATAAAATGAATGTTACGAACATTTTCCTATCCATGATGTTAAATGATTGACTTGTTTGGATACAATTCCTATCCATGATTTTAAATGATTGACTTGTTTGGATACAATATATATTTTACAAACACTAAATGGCTTCAGTTCTGATCAACATACGCAATAATTTTGGGGTCGATCTAGTTGTTGAAAGCCAGTCTCTGTATATGTTTATGGTACAATCGCCGCGATTATAATCCAAATGGCTTTCTACACAGACAAAAAAAGGAGAAGAATTGATCCTCCAGAGATGGGAAGAAGCAATATGAAGTTAAGACAAAATTAGATGCAACTGCACTCTAATTTAGACTTTTCCGACTTCTAGTTTACATCTCTAAGCTTGATGAACCATTAAAAGAATTTAAAATGAGAAGCCGTTACCTCTGATATAATGCATGGGTAACCTTTAGAGAGTATTGGCATAGACCAATACATTTCAGCCGCGCACCAATTAAGTGAAGTGCTTATATTGTTTAATTTTTTCCCATCTTTGTTCAAATGGTTAATGATCATCATTTTTTTCCCCTTTGAATGTCTTGTTTTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTAT</genome_strand>
        <mrna_strand>AACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E445992" ref_strand="+" ref_description="SGN-E445992 [cSTA-19-H3]">
      <seq>cgcccaaacccgaacccgatatgatccaactcatccaccacgccattaactccggcgtcacttttctcgatacttccgatgtatatggaccccacactaacgagatcctccttggcaaggctctgaagggcgggataagggaacgagttgagttagcaacaaaatttgctgtatgttttgcagatggaaaaatgcaagtgcgcggagagccagcctatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="109668" stop="107217"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="109368" g_stop="109250" g_length="119"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="119" r_length="119" r_score="0.924"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="109249" i_stop="107660" i_length="1590">
            <donor d_prob="1.000" d_score="0.92"/>
            <acceptor a_prob="1.000" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107659" g_stop="107517" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="120" r_stop="262" r_length="143" r_score="0.972"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E445992" ref_strand="+">
        <total_alignment_score>0.950</total_alignment_score>
        <cumulative_length_of_scored_exons>262</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E445992" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="109368" e_stop="109250"/>
          <exon e_start="107659" e_stop="107517"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAGGTACTTAACTTCTTAATTTTTGGGATTTTCTCTGCCTTTTATGCATTGATTATTGTACGCTATGCTTGTTGATTTTGGAATCTTGGTGTTTGAGCTGGAATTGTTGTAACATATGCAAATGTGCTGGTTCATAAAGCTTAAAAGGCTTGCACTTTTCGCATCCTTGTAGCCTAGGGATCTGTTAAATGAGTCGAGAACATGAGGTTTAAGGTTCAGCTAAGACACCATGGTTATCAATAAAAAAGAAAAGACTCTACTTTTTGTTTTAGGTTGAATTGGGTTGGATTTGGTGCTATTCTTTACACGTTTTAGCTCCTTTGAGGTGGACCTTAGCAAGAAATGTTGTTCATGGTTCTTCAAAACATGTATATCTTTTGGAGGTGTTGACCTAAGTTGCTCGGACTCAGGTGCGGGTGTCCGATACGTGTGTGGATCTAAAGGTCGGATTCATCATGATCGATCTAATTTTTAAGATTCAGGAATATGGATCCATATGAGTGCGGGGACTCGCCTAAAAATAATTAGAATATTTAAAAAATAGAGCTATAAAACCTAAATTATGAGATATTATGTGGAGAACTTGAGGAGAATCCAGGAAGGAGATCAAAGGAAAAGGAGGGATATCGAAATTTCTATATAAAAGGTATTCCATTTCCTTCAATTTCACCTTAGCTTTTGTATTGATTACAAAAATCATTAAAATTGTCCAGACTTTCCCCATCGATTTTGGTCAAAATACCCAAAATCGGTTGACCGAATCGGACACAGATCCCTCACTTTCACCCATGCGGCACCAAAAGTGAAGAGTCTGAGCAACTTAGGTGTTGAGAAAGGCGAATTCAAAATTTGAAACTTAATGGGTTCGCACCAAAATTTTATCATTTGCCGTCTAATTTAGTGGTTCAAAAATCTATTACTTGTACTAATTTATTGAGCTTTTTAACGCATATAGATGGTCTAAGCCAAAGCTATTGGGTTCGGATGAGTCCATAGGTTCTTTACTAGGTCCTCCCTGGGTGTTCGGGATGGTTTTCCCTGGGTGCTTGAAATTTGAAGGTTCCAATGAAGTCAGTGCTAGTATGCAGAGTTTATCTTTACTTGTAATAGCTAGTTCCAACAATTTCATTCTTAATATGCTAAATAATCTGATTATTTAGATGCTAAAATCTATCGAGGTCAGGATAAGGGCAAATGTAGCGAGAATCGAAGTGAAATGACAGAAAACGGAAAGCTCAGAGACAGAATTGTTTTATTGTTGAACCACTGTCCAGTCGAAAAAGAAAAGAAACCTCTTGTCGATACAAAGTCAGCCAAGTCTAAGAACAAGAATACAAGTAATGAAAGAAAGAGCTTTAGTGAGTGTTATGTAGTAGTTGCAGTGAATAATTGATGATTGATGTCCTTGTTTGTAGGGATGAGGCTCCTTTTACAGGGTAAAGAAGAGGGTCTCTATGTAATTTTTTAATTCTTTTTTCAAATGATGAGAGTCATGGTCAGTTGCTAAGAGCGTGGCTGTCGGTTCTTGGGTTGGTTGAGAGTCTGTTGGTCCTCAAGGTTATATGATAATCAATGATCATTGTATTTATGCAGGCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGA</genome_strand>
        <mrna_strand>CGCCCAAACCCGAACCCGATATGATCCAACTCATCCACCACGCCATTAACTCCGGCGTCACTTTTCTCGATACTTCCGATGTATATGGACCCCACACTAACGAGATCCTCCTTGGCAAG......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCTCTGAAGGGCGGGATAAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTATGTTTTGCAGATGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E745325" ref_strand="+" ref_description="SGN-E745325 [GI|47105753]">
      <seq>ggaacgacaacaatgacgaaagagggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccagaatatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgattgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaataaaatatataggtctatcagaggcttcagcatcaacaattagaagagcacacgctgttcatccaataacagcagtacaattagaatggtcactatggtcgagagatgtagaggaagaaataatccctacttgcagagaactcggaattgggattgtagcatacagtccactaggccggggctttttgtcatccggtccaaagctggttgaggacttgacaaatgaagatttccgaaagcatctaccgaggtttcagggcgagaatcttgagcataacaaaaaattgtacgagaggatttgtgaattggcaactaagaagggatgcaccccgtctcaactggcgttggcgtgggtacatcaccaaggaaacgacgtgtgtcccatcccgggcaccactaagattgaaaatttcaatcagaacattggagctctgtccataaagctaacatcagaagacatggcagagcttgaatctattgcttcagctaatgcagtccagggtgataggtacggttcggctgcggcaacctacaaagattcagaaactcctcctatttcagcatggaaggctacataaatatagagttgttcttgtgttgtgcactgtatgtaatgaggtttcttttttcctgtttcaaaactattgtgccacttactgatggttcaaataataaaatcaattctctgtttgtggactttttcctatggacaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111998" stop="109807"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111699" g_stop="111463" g_length="237"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="237" r_length="237" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111164" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="238" r_stop="438" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115">
            <donor d_prob="0.685" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111048" g_stop="110876" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="439" r_stop="611" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110784" g_stop="110682" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="612" r_stop="714" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="110585" g_stop="110115" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="715" r_stop="1185" r_length="471" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1187" polyA_stop="1205"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E745325" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1185</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E745325" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111699" e_stop="111463"/>
          <exon e_start="111364" e_stop="111164"/>
          <exon e_start="111048" e_stop="110876"/>
          <exon e_start="110784" e_stop="110682"/>
          <exon e_start="110585" e_stop="110115"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGAACGACAACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAGGTACTTTTTTTCTTCTTTCTGTTAGTTTTTTTTGTGTTTGAGGTTTATACCAATGTGAGATCCTGATTTTTCCCGTCTGTTAACTGTTCAGAGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAGGTTCAGATTATATTTATTGTTTGTTTTGAGGTCCAATATGTTCACATTATGTTTAATTGCAGTGCATTTGACTTGAAAAGATCTCCAACTTTGCAGCATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGACTTTTTCCTATGGA</genome_strand>
        <mrna_strand>GGAACGACAACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG..................................................................................................GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG...................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG...........................................................................................AGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAG................................................................................................CATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGACTTTTTCCTATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E202661" ref_strand="-" ref_description="SGN-E202661 [cLEC-19-H9]">
      <seq>ggattgtagcatacagtccactaggccggggctttttgtcatccggtccaaagctggttgaggacttgacaaatgaagatttccgaaagcatctaccgaggtttcagggcgagaatcttgagcataacaaaaaattgtacgagaggatttgtgaattggcaactaagaagggatgcaccccgtctcaactggcgttggcgtgggtacatcaccaaggaaacgacgtgtgtcccatcccgggcaccactaagattgaaaatttcaatcagaacattggagctctgtccataaagctaacatcagaagacatggcagagcttgaatctattgcttcagctaatgcagtccagggtgataggtacggttcggctgcagcaacctacaaagattcagaaactcctcctatttcagcatggaaggctacataaatatagagttgttcttgtgttgtgcactgtatgtaatgaggtttcttttttcctgtttcaaaactattgtgccacttactgatggttcaaataataaaatcaattctctgtttgtggactttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111070" stop="109824"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110770" g_stop="110682" g_length="89"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="89" r_length="89" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110585" g_stop="110124" g_length="462"/>
          <reference_exon_boundary r_type="cDNA" r_start="90" r_stop="551" r_length="462" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E202661" ref_strand="-">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>551</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E202661" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="110770" e_stop="110682"/>
          <exon e_start="110585" e_stop="110124"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAGGTTCAGATTATATTTATTGTTTGTTTTGAGGTCCAATATGTTCACATTATGTTTAATTGCAGTGCATTTGACTTGAAAAGATCTCCAACTTTGCAGCATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGACTTTT</genome_strand>
        <mrna_strand>GGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAG................................................................................................CATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGACTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E350332" ref_strand="+" ref_description="SGN-E350332 [cTOS-5-M19]">
      <seq>tggtcactatggtcgagagatgtagaggaagaaataatccctacttgcagagaactcggaattgggattgtagcatacagtccactaggccggggctttttgtcatccggtccaaagctggttgaggacttgacaaatgaagatttccgaaagcatctaccgaggtttcagggcgagaatcttgagcataacaaaaaattgtacgagaggatttgtgaattggcaactaagaagggatgcaccccgtctcaactggcgttggcgtgggtacatcaccaaggaaacgacgtgtgtcccatcccgggcaccactaagattgaaaatttcaatcagaacattggagctctgtccataaagctaacatcagaagacatggcagagcttgaatctattgcttcagctaatgcagtccagggtgataggtacggttcggctgcagcaacctacaaagattcagaaactcctcctatttcagcatggaaggctacataaatatagagttgttcttgtgttgtgcactgtatgtaatgaggtttcttttttcctgtttcaaaactattgtgccacttactgatggttcaaataataaaatcaattctctgtttgtggaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111225" stop="109829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110925" g_stop="110876" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="50" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110784" g_stop="110682" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="51" r_stop="153" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110585" g_stop="110129" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="154" r_stop="610" r_length="457" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E350332" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>610</cumulative_length_of_scored_exons>
        <coverage percentage="0.985" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E350332" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110925" e_stop="110876"/>
          <exon e_start="110784" e_stop="110682"/>
          <exon e_start="110585" e_stop="110129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAGGTACTTTTTTTCTTCTTTCTGTTAGTTTTTTTTGTGTTTGAGGTTTATACCAATGTGAGATCCTGATTTTTCCCGTCTGTTAACTGTTCAGAGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAGGTTCAGATTATATTTATTGTTTGTTTTGAGGTCCAATATGTTCACATTATGTTTAATTGCAGTGCATTTGACTTGAAAAGATCTCCAACTTTGCAGCATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGA</genome_strand>
        <mrna_strand>TGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG...........................................................................................AGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAG................................................................................................CATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309061" ref_strand="+" ref_description="SGN-E309061 [cLEZ-1-I9](-)">
      <seq>aggaagaaataatccctacttgcagagaactcggaattgggattgtagcatacagtccactaggccggggctttttgtcatccggtccaaagctggttgaggacttgacaaatgaagatttccgaaagcatctaccgaggtttcagggcgagaatcttgagcataacaaaaaattgtacgagaggatttgtgaattggcaactaagaagggatgcaccccgtctcaactggcgttggcgtgggtacatcaccaaggaaacgacgtgtgtcccatcccgggcaccactaagattgaaaatttcaatcagaacattggagctctgtccataaagctaacatcagaagacatggcagagcttgaatctattgcttcagctaatgcagtccagggtgataggtacggttcggctgcagcaacctacaaagattcagaaactcctcctatttcagcatggaaggctacataaatatagagttgttcttgtgttgtgcactgtatgtaatgaggtttcttttttcctgtttcaaaactattgtgccacttactgatggttcaaataataaaatcaattctctgtttgtggaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111200" stop="109829"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="110900" g_stop="110876" g_length="25"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="25" r_length="25" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="110784" g_stop="110682" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="26" r_stop="128" r_length="103" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="110585" g_stop="110129" g_length="457"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="585" r_length="457" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="586" polyA_stop="595"/>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E309061" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>585</cumulative_length_of_scored_exons>
        <coverage percentage="0.983" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309061" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="110900" e_stop="110876"/>
          <exon e_start="110784" e_stop="110682"/>
          <exon e_start="110585" e_stop="110129"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGGAAGAAATAATCCCTACTTGCAGGTACTTTTTTTCTTCTTTCTGTTAGTTTTTTTTGTGTTTGAGGTTTATACCAATGTGAGATCCTGATTTTTCCCGTCTGTTAACTGTTCAGAGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAGGTTCAGATTATATTTATTGTTTGTTTTGAGGTCCAATATGTTCACATTATGTTTAATTGCAGTGCATTTGACTTGAAAAGATCTCCAACTTTGCAGCATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGA</genome_strand>
        <mrna_strand>AGGAAGAAATAATCCCTACTTGCAG...........................................................................................AGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAG................................................................................................CATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E465941" ref_strand="+" ref_description="SGN-E465941 [cPRO-22-P15]">
      <seq>gaaagaggaaaaaaatgtgggaagaatcaaattaggttcagaaggactagaagtatctgttcaaggacttggttgtatgggtatgtccgctttttatgggtcgcccaaacccgaacccgatatgatccaactcattcaccatgccgttaactccggcgttacatttcttgatacttccaatagttatgggccacacactaacgaaatcctccttggcaaggcgttgaagggaggaatgagggagcgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagagagaagtacgtggagatccagcctatgtaagggcagcatgcgaggctagcttaaagagacttgatgttgattgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagaggggaaaataaaatatataggtctatcggaggcttcaccatcaacaattagaagagcacatgctgttcatccaataacagcagtacaattagaatggtctctatggtcgagagatgtagaggaagaaataatccctacttgcagagaactcggaattgggattgtagcatacagtccactaggacggggctttttgtcatccggtccaaagctggttgaggacttgacaaatgaagatttccgaaagcatctaccgaggtttcagggagaaaatcttgagcataa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="112582" stop="110248"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="112282" g_stop="112063" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="0.959"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="112062" i_stop="111365" i_length="698">
            <donor d_prob="0.998" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111164" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="421" r_length="201" r_score="0.965"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115">
            <donor d_prob="0.685" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111048" g_stop="110876" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="594" r_length="173" r_score="0.971"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.923" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110784" g_stop="110682" g_length="103"/>
          <reference_exon_boundary r_type="cDNA" r_start="595" r_stop="697" r_length="103" r_score="0.990"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96">
            <donor d_prob="0.985" d_score="1.00"/>
            <acceptor a_prob="0.916" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="110585" g_stop="110548" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="698" r_stop="735" r_length="38" r_score="0.947"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E465941" ref_strand="+">
        <total_alignment_score>0.968</total_alignment_score>
        <cumulative_length_of_scored_exons>735</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E465941" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="112282" e_stop="112063"/>
          <exon e_start="111364" e_stop="111164"/>
          <exon e_start="111048" e_stop="110876"/>
          <exon e_start="110784" e_stop="110682"/>
          <exon e_start="110585" e_stop="110548"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGAGGGAAAAAATGTGAGAAGAATCAAATTAGGTTCAGAAGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTATGGGTATGTCCGCTTATTACGGGTCGCCCAAACCCGAACCCGATATGATCCAACTCATTCACCATGCCGTTAACTCTGGCGTTACATTTCTCGATACTTCCAACAGTTATGGGCCACACACTAACGAAATCCTCCTTGGTAAGGTATCACTTTGTATTTTAATTATCGATATGAAGTCACGTTATGTCTTATCTAATCATGTAATCTTAATACCTTTTCAGTTTACTTCCTATAACTCCGCGTACCATCTATGATCAGCCTTTCACACTTTGTTACTTGGCATCACTCACGTCCTATTGACATGCCTAAAATGACTCATAATTATATTAAATGGAAACATGAAAAGTCATAAACTAGAATATAAATTTTCTTAGCATTAATAGAGAATGAAACATATTAGTGACGCACGTGCTTACATATAATTAATAAAACGCATGTGCTTACGTATAATAAATCAAAGTTATATTAGTGTTTATATATAGAAACACTTCTTCGAATTTTTTAACTGAACGACAACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAGGTACTTTTTTTCTTCTTTCTGTTAGTTTTTTTTGTGTTTGAGGTTTATACCAATGTGAGATCCTGATTTTTCCCGTCTGTTAACTGTTCAGAGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAGGTTCAGATTATATTTATTGTTTGTTTTGAGGTCCAATATGTTCACATTATGTTTAATTGCAGTGCATTTGACTTGAAAAGATCTCCAACTTTGCAGCATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAA</genome_strand>
        <mrna_strand>GAAAGAGGAAAAAAATGTGGGAAGAATCAAATTAGGTTCAGAAGGACTAGAAGTATCTGTTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTATGGGTCGCCCAAACCCGAACCCGATATGATCCAACTCATTCACCATGCCGTTAACTCCGGCGTTACATTTCTTGATACTTCCAATAGTTATGGGCCACACACTAACGAAATCCTCCTTGGCAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCGTTGAAGGGAGGAATGAGGGAGCGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGAGAGAAGTACGTGGAGATCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGAGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG...................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGGAAAATAAAATATATAGGTCTATCGGAGGCTTCACCATCAACAATTAGAAGAGCACATGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG...........................................................................................AGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGACGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAG................................................................................................CATCTACCGAGGTTTCAGGGAGAAAATCTTGAGCATAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309060" ref_strand="+" ref_description="SGN-E309060 [cLEZ-1-I9]">
      <seq>aaagagggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccagaatatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgattgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaataaaatatataggtctatcagaggcttcagcatcaacaattagaagagcacacgctgttcatccaataacagcagtacaattagaatggtcactatggtcgagagatgtagaggaagaaataatccctacttgcagagaactcggaattgggattgtagcatacagtccactaggccggggctttttgtcat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111981" stop="110429"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111681" g_stop="111463" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111164" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="420" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115">
            <donor d_prob="0.685" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111048" g_stop="110876" g_length="173"/>
          <reference_exon_boundary r_type="cDNA" r_start="421" r_stop="593" r_length="173" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.923" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="110784" g_stop="110729" g_length="56"/>
          <reference_exon_boundary r_type="cDNA" r_start="594" r_stop="649" r_length="56" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E309060" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>649</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309060" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111681" e_stop="111463"/>
          <exon e_start="111364" e_stop="111164"/>
          <exon e_start="111048" e_stop="110876"/>
          <exon e_start="110784" e_stop="110729"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAGGTACTTTTTTTCTTCTTTCTGTTAGTTTTTTTTGTGTTTGAGGTTTATACCAATGTGAGATCCTGATTTTTCCCGTCTGTTAACTGTTCAGAGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCAT</genome_strand>
        <mrna_strand>AAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG..................................................................................................GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG...................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG...........................................................................................AGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310883" ref_strand="+" ref_description="SGN-E310883 [cLEZ-17-E11]">
      <seq>agaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccagaatatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgattgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaataaaatatataggtctatcagaggcttcagcatcaacaattagaagagcacacgctgttcatccaataacagcagtacaattagaatggtcactatggtcgagagatgtagaggaagaaataatccctacttgc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111971" stop="110578"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111671" g_stop="111463" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111164" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="410" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115">
            <donor d_prob="0.685" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111048" g_stop="110878" g_length="171"/>
          <reference_exon_boundary r_type="cDNA" r_start="411" r_stop="581" r_length="171" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E310883" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>581</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310883" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111671" e_stop="111463"/>
          <exon e_start="111364" e_stop="111164"/>
          <exon e_start="111048" e_stop="110878"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGC</genome_strand>
        <mrna_strand>AGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG..................................................................................................GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG...................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E281897" ref_strand="+" ref_description="SGN-E281897 [cLES-2-J15]">
      <seq>gaaagagggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccagaatatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgattgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggagaacttaagaagctggttgaagagggtaaaataaaatatataggtctatcagaggcttcagcatcaacaattag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111982" stop="110669"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111682" g_stop="111463" g_length="220"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="220" r_length="220" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111164" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="221" r_stop="421" r_length="201" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115">
            <donor d_prob="0.685" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111048" g_stop="110969" g_length="80"/>
          <reference_exon_boundary r_type="cDNA" r_start="422" r_stop="501" r_length="80" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E281897" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>501</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E281897" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111682" e_stop="111463"/>
          <exon e_start="111364" e_stop="111164"/>
          <exon e_start="111048" e_stop="110969"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAG</genome_strand>
        <mrna_strand>GAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG..................................................................................................GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG...................................................................................................................GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E339709" ref_strand="+" ref_description="SGN-E339709 [cTOE-16-E14]">
      <seq>aaagagggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccagaatatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgattgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttggtttctctgtttccattgataactcttgtcaaatctttacgaacactcaatgctgcataaaaaattacactatcagcatgttttattactgtgcaattcttgatctactaggttggagaact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111981" stop="110738"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111681" g_stop="111463" g_length="219"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="219" r_length="219" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111038" g_length="327"/>
          <reference_exon_boundary r_type="cDNA" r_start="220" r_stop="546" r_length="327" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E339709" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>546</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E339709" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111681" e_stop="111463"/>
          <exon e_start="111364" e_stop="111038"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGGAGAACT</genome_strand>
        <mrna_strand>AAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG..................................................................................................GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGGAGAACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E460195" ref_strand="+" ref_description="SGN-E460195 [cPRO-30-A8]">
      <seq>caatgacgaaagacggaaaaaatgtgggaagaattaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctatgggccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttctaatagttatgggccttacactaacgaaatcctccttggcaaggcattgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagagagaagtacgtggagagccagcctatgtaagggcagcatgcgaggctagcttaaagcggcttgatgttgattgcatagacttgtactaccagcaccggattgatacacgcgtgcccattgaagtaacggttgg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111989" stop="110859"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111689" g_stop="111463" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111164" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="428" r_length="201" r_score="0.975"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115">
            <donor d_prob="0.685" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="111048" g_stop="111044" g_length="5"/>
          <reference_exon_boundary r_type="cDNA" r_start="429" r_stop="433" r_length="5" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E460195" ref_strand="+">
        <total_alignment_score>0.967</total_alignment_score>
        <cumulative_length_of_scored_exons>433</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E460195" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111689" e_stop="111463"/>
          <exon e_start="111364" e_stop="111164"/>
          <exon e_start="111048" e_stop="111044"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGG</genome_strand>
        <mrna_strand>CAATGACGAAAGACGGAAAAAATGTGGGAAGAATTAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTATGGGCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCTAATAGTTATGGGCCTTACACTAACGAAATCCTCCTTGGCAAG..................................................................................................GCATTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGAGAGAAGTACGTGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGGCTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG...................................................................................................................GTTGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E200213" ref_strand="+" ref_description="SGN-E200213 [cLEC-12-G17]">
      <seq>ggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccagaatatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgattgcatagacttgtactaccagcaccggattgatacacgcgtgcccatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111975" stop="110873"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111675" g_stop="111463" g_length="213"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="213" r_length="213" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111173" g_length="192"/>
          <reference_exon_boundary r_type="cDNA" r_start="214" r_stop="405" r_length="192" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E200213" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>405</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E200213" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111675" e_stop="111463"/>
          <exon e_start="111364" e_stop="111173"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATT</genome_strand>
        <mrna_strand>GGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG..................................................................................................GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E337480" ref_strand="+" ref_description="SGN-E337480 [cTOE-11-H17]">
      <seq>aatgacgaaagagggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccagaatatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgattgcatagacttgtactaccagcaccggattgata</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111988" stop="110887"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111688" g_stop="111463" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111187" g_length="178"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="404" r_length="178" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E337480" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>404</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E337480" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111688" e_stop="111463"/>
          <exon e_start="111364" e_stop="111187"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATA</genome_strand>
        <mrna_strand>AATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG..................................................................................................GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E201962" ref_strand="+" ref_description="SGN-E201962 [cLEC-7-C8]">
      <seq>aatgacgaaagagggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccataatatgtaagggcagcatgcgaggctagcttaaagcgacttgatgttgattgcatagacttgtactacc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111988" stop="110902"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111688" g_stop="111463" g_length="226"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="226" r_length="226" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.987" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111202" g_length="163"/>
          <reference_exon_boundary r_type="cDNA" r_start="227" r_stop="389" r_length="163" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E201962" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>389</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E201962" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111688" e_stop="111463"/>
          <exon e_start="111364" e_stop="111202"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACC</genome_strand>
        <mrna_strand>AATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG..................................................................................................GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCATAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E309922" ref_strand="+" ref_description="SGN-E309922 [cLEZ-10-K24]">
      <seq>aacaatgacgaaagagggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttcaaatagttatgggccttacactaatgaaatcctccttggcaaggtatcaatttgtcaattcttttaagttatggttgtaccgaatcgaacatgaagtaataaggtgaaagtaaatactgagctgctaaaattctaatacaggctttgaagggaggaatgagggaacgagtcgagttagcaacaaaatttggtatacattttgcagatggaaagatagaagtacgtggagagccagaatatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111991" stop="110965"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111691" g_stop="111265" g_length="427"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="427" r_length="427" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E309922" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>427</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E309922" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111691" e_stop="111265"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATG</genome_strand>
        <mrna_strand>AACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E436155" ref_strand="+" ref_description="SGN-E436155 [STM-62-J1]">
      <seq>caatgacgaaagacggaaaaaatgtgggaagaattaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctatgggccgcccaaacccgaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatacttctaatagttatgggccttacactaacgaaatcctccttggcaaggcattgaagggaggaatgagggaacgagtccagttatcaaccaaatttggtatacattt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111989" stop="111006"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111689" g_stop="111463" g_length="227"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98">
            <donor d_prob="0.995" d_score="0.96"/>
            <acceptor a_prob="0.987" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="111364" g_stop="111306" g_length="59"/>
          <reference_exon_boundary r_type="cDNA" r_start="228" r_stop="286" r_length="59" r_score="0.932"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E436155" ref_strand="+">
        <total_alignment_score>0.955</total_alignment_score>
        <cumulative_length_of_scored_exons>286</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E436155" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111689" e_stop="111463"/>
          <exon e_start="111364" e_stop="111306"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTT</genome_strand>
        <mrna_strand>CAATGACGAAAGACGGAAAAAATGTGGGAAGAATTAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTATGGGCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCTAATAGTTATGGGCCTTACACTAACGAAATCCTCCTTGGCAAG..................................................................................................GCATTGAAGGGAGGAATGAGGGAACGAGTCCAGTTATCAACCAAATTTGGTATACATTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E310889" ref_strand="+" ref_description="SGN-E310889 [cLEZ-17-I13]">
      <seq>aacaatgactaaagagggaaagaatgtgaaaagaatcaaattgggttcagagggacttgaagtatctgttcaaggacttggttgtctgggtatgtccgatttctacggtccgcccaaaccccaacccgatatgattgaactaatacaccatgccattaactccggcataacatttttcgatactctaaatagttatgggccttacactaatgaaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C09HBa0226D21-dSMcV/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C09HBa0226D21.1" temp_strand="-" temp_description="C09HBa0226D21.1  EU139072.1 htgs_phase:3 submitted_to_sgn_as:C09HBa0226D21 upload_account_name:spain">
        <position start="111991" stop="111176"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="111691" g_stop="111476" g_length="216"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="216" r_length="216" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C09HBa0226D21.1" gen_strand="-" ref_id="SGN-E310889" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>216</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C09HBa0226D21.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E310889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="111691" e_stop="111476"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAAT</genome_strand>
        <mrna_strand>AACAATGACTAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCCAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTCTAAATAGTTATGGGCCTTACACTAATGAAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>144</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="5336" PGL_stop="3814"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="5336" e_stop="5132"/>
            <exon e_start="4722" e_stop="4319"/>
            <exon e_start="4126" e_stop="3814"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.988" acc_prob="0.778" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="5336" e_stop="5132" e_length="205"/>
          </exon>
          <intron i_serial="1" don_prob="0.988" acc_prob="0.778">
            <gDNA_intron_boundary i_start="5131" i_stop="4723" i_length="409"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="4722" e_stop="4319" e_length="404"/>
          </exon>
          <intron i_serial="2" don_prob="0.995" acc_prob="0.998">
            <gDNA_intron_boundary i_start="4318" i_stop="4127" i_length="192"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="4126" e_stop="3814" e_length="313"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5336" stop="5132"/>
              <exon start="4722" stop="4319"/>
              <exon start="4126" stop="3898"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E718586" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5335" stop="5132"/>
              <exon start="4722" stop="4319"/>
              <exon start="4126" stop="3820"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E719906" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5322" stop="5132"/>
              <exon start="4722" stop="4319"/>
              <exon start="4126" stop="3816"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E699586" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5322" stop="5132"/>
              <exon start="4722" stop="4319"/>
              <exon start="4126" stop="3887"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E702103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="5321" stop="5132"/>
              <exon start="4722" stop="4319"/>
              <exon start="4126" stop="4014"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E698680" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4700" stop="4319"/>
              <exon start="4126" stop="3827"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E715269" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4558" stop="4319"/>
              <exon start="4126" stop="3814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E713530" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="4511" stop="4319"/>
              <exon start="4126" stop="3836"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E712739" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAATAAGTAAACAGATCAACACAACAAAATTCTGATTTTTTCTTTGAAATTTTAGAGAAAAAAAAAGATGGAAGGCATAAATATATCGACTCATCCAGATGTTCCAGGTGAACCTACGCAGACAGGAACATCAATTCTTGAGACTGCAACAGCTACTATTCAAGGATTTGGTCCTATCAACAAAATTCATCAACATCTTTGCGC : GTTCCATTTCTACGGACACGACATGACACGGCAAGTGGAGGCGCACCACTTCTGTGGACACCAAAATGAAGAGTTCAGGCAGTGTCTCATTTACGACAGGCCTGATGCCGATGCTCGTCTAATCGGGCTCGAGTACATCGTATCGGAGGAGCTGTTCTTGACATTGCCAGACGACGAGAAGAAATTCTGGCATTCCCACTTGTACGAGGTGAAAAGTGGTGTCTTGTTCATGCCCGGTGTTCCAGGCCCGATTCAACGACAAGATCATGAAAAAACGGTGAAAACTTATGGCAAAGTGATACATTTCTGGCAGGTTGATAGAGGTGATACACTTCCTTTGGGAATTCCTCAAGTTATGATGGCGCTTACTAGAGATGGTCAACTCGATCAGAACCTTGTTCAAG : ATGTGGAGAAGCGTTTTGGTGTGTCCTTTGATGAAGAAAGGGAGAAAAGGGCATATATGGAAGGTCCGTCCCATGGGGTTCACCCACTTGCTAATGCTGGAGGCAAAGGCATTCGCACTGTCCTTAGAGAAGTTGATTGTAAACCTATCGAATCTGTCCCTAGAGTTTTTGTTTAAGCTTAGGTTCATTTCGTTTTGCGTTTATTTTGTTCAAAATAAAATTTTACTTTTGTGACAGGACTTGTATATGTATATGTTTCGAGTGTTGGTGAATGAATAATTCCCCTCTTCTATGTTTATGTAATCAAATACTG</gDNA_template>
            <first_frame> K  I  S  K  Q  I  N  T  T  K  F  *  F  F  L  *  N  F  R  E  K  K  R  W  K  A  *  I  Y  R  L  I  Q  M  F  Q  V  N  L  R  R  Q  E  H  Q  F  L  R  L  Q  Q  L  L  F  K  D  L  V  L  S  T  K  F  I  N  I  F  A   : R  S  I  S  T  D  T  T  *  H  G  K  W  R  R  T  T  S  V  D  T  K  M  K  S  S  G  S  V  S  F  T  T  G  L  M  P  M  L  V  *  S  G  S  S  T  S  Y  R  R  S  C  S  *  H  C  Q  T  T  R  R  N  S  G  I  P  T  C  T  R  *  K  V  V  S  C  S  C  P  V  F  Q  A  R  F  N  D  K  I  M  K  K  R  *  K  L  M  A  K  *  Y  I  S  G  R  L  I  E  V  I  H  F  L  W  E  F  L  K  L  *  W  R  L  L  E  M  V  N  S  I  R  T  L  F  K  :  M  W  R  S  V  L  V  C  P  L  M  K  K  G  R  K  G  H  I  W  K  V  R  P  M  G  F  T  H  L  L  M  L  E  A  K  A  F  A  L  S  L  E  K  L  I  V  N  L  S  N  L  S  L  E  F  L  F  K  L  R  F  I  S  F  C  V  Y  F  V  Q  N  K  I  L  L  L  *  Q  D  L  Y  M  Y  M  F  R  V  L  V  N  E  *  F  P  S  S  M  F  M  *  S  N  T  </first_frame>
            <second_frame>  K  *  V  N  R  S  T  Q  Q  N  S  D  F  F  F  E  I  L  E  K  K  K  D  G  R  H  K  Y  I  D  S  S  R  C  S  R  *  T  Y  A  D  R  N  I  N  S  *  D  C  N  S  Y  Y  S  R  I  W  S  Y  Q  Q  N  S  S  T  S  L  R  :  V  P  F  L  R  T  R  H  D  T  A  S  G  G  A  P  L  L  W  T  P  K  *  R  V  Q  A  V  S  H  L  R  Q  A  *  C  R  C  S  S  N  R  A  R  V  H  R  I  G  G  A  V  L  D  I  A  R  R  R  E  E  I  L  A  F  P  L  V  R  G  E  K  W  C  L  V  H  A  R  C  S  R  P  D  S  T  T  R  S  *  K  N  G  E  N  L  W  Q  S  D  T  F  L  A  G  *  *  R  *  Y  T  S  F  G  N  S  S  S  Y  D  G  A  Y  *  R  W  S  T  R  S  E  P  C  S  R :   C  G  E  A  F  W  C  V  L  *  *  R  K  G  E  K  G  I  Y  G  R  S  V  P  W  G  S  P  T  C  *  C  W  R  Q  R  H  S  H  C  P  *  R  S  *  L  *  T  Y  R  I  C  P  *  S  F  C  L  S  L  G  S  F  R  F  A  F  I  L  F  K  I  K  F  Y  F  C  D  R  T  C  I  C  I  C  F  E  C  W  *  M  N  N  S  P  L  L  C  L  C  N  Q  I  L </second_frame>
            <third_frame>   N  K  *  T  D  Q  H  N  K  I  L  I  F  S  L  K  F  *  R  K  K  K  M  E  G  I  N  I  S  T  H  P  D  V  P  G  E  P  T  Q  T  G  T  S  I  L  E  T  A  T  A  T  I  Q  G  F  G  P  I  N  K  I  H  Q  H  L  C  A :   F  H  F  Y  G  H  D  M  T  R  Q  V  E  A  H  H  F  C  G  H  Q  N  E  E  F  R  Q  C  L  I  Y  D  R  P  D  A  D  A  R  L  I  G  L  E  Y  I  V  S  E  E  L  F  L  T  L  P  D  D  E  K  K  F  W  H  S  H  L  Y  E  V  K  S  G  V  L  F  M  P  G  V  P  G  P  I  Q  R  Q  D  H  E  K  T  V  K  T  Y  G  K  V  I  H  F  W  Q  V  D  R  G  D  T  L  P  L  G  I  P  Q  V  M  M  A  L  T  R  D  G  Q  L  D  Q  N  L  V  Q   : D  V  E  K  R  F  G  V  S  F  D  E  E  R  E  K  R  A  Y  M  E  G  P  S  H  G  V  H  P  L  A  N  A  G  G  K  G  I  R  T  V  L  R  E  V  D  C  K  P  I  E  S  V  P  R  V  F  V  *  A  *  V  H  F  V  L  R  L  F  C  S  K  *  N  F  T  F  V  T  G  L  V  Y  V  Y  V  S  S  V  G  E  *  I  I  P  L  F  Y  V  Y  V  I  K  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="5280" stop="5132"/>
                    <exon start="4722" stop="4319"/>
                    <exon start="4126" stop="3951"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>726</number_coding_nucleotides>
                  <number_encoded_amino_acids>242</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKKKMEGINISTHPDVPGEPTQTGTSILETATATIQGFGPINKIHQHLCAFHFYGHDMTRQVEAHHFCGHQNEEFRQCLIYDRPDADARLIGLEYIVSEELFLTLPDDEKKFWHSHLYEVKSGVLFMPGVPGPIQRQDHEKTVKTYGKVIHFWQVDRGDTLPLGIPQVMMALTRDGQLDQNLVQDVEKRFGVSFDEEREKRAYMEGPSHGVHPLANAGGKGIRTVLREVDCKPIESVPRVFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="17635" PGL_stop="27055"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="17635" e_stop="18195"/>
            <exon e_start="23164" e_stop="23477"/>
            <exon e_start="24130" e_stop="24267"/>
            <exon e_start="24613" e_stop="24678"/>
            <exon e_start="24809" e_stop="24877"/>
            <exon e_start="25208" e_stop="25588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="0.934"/>
          <exon-intron don_prob="1.000" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="17635" e_stop="18195" e_length="561"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23164" e_stop="23477" e_length="314"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.937">
            <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24130" e_stop="24267" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24613" e_stop="24678" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="24809" e_stop="24877" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.991">
            <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330"/>
          </intron>
          <exon e_serial="6" e_score="0.961">
            <gDNA_exon_boundary e_start="25208" e_stop="25588" e_length="381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17635" stop="18043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
              <exon start="23164" stop="23362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17679" stop="18195"/>
              <exon start="23164" stop="23251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17684" stop="18179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17685" stop="18092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17780" stop="18195"/>
              <exon start="23164" stop="23299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17788" stop="18195"/>
              <exon start="23164" stop="23477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17951" stop="18195"/>
              <exon start="23164" stop="23477"/>
              <exon start="24130" stop="24213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23208" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416758" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24209" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420524" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617954" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24652" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302680" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACAAGTGTAGCACTTTTTCATTTTTTTAATTCCCAACTTGCTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG : TTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG : TTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG : GAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG : CAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAG : AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACAACTACTTTCTCTATTTCATTTTTAT</gDNA_template>
            <first_frame> K  Q  V  *  H  F  F  I  F  L  I  P  N  L  L  S  S  L  T  P  P  T  H  L  S  L  Y  *  L  L  N  L  Q  I  L  T  I  Q  F  E  Q  I  I  K  C  I  H  H  Q  H  L  L  H  H  K  V  Q  *  A  T  P  A  P  P  L  A  A  P  A  V  V  S  L  A  T  V  Q  L  R  D  H  F  *  L  Q  Q  L  K  P  S  L  T  V  I  T  S  S  L  L  T  D  L  I  T  H  T  L  V  L  H  G  F  F  S  P  I  *  H  L  L  R  *  I  P  N  L  Q  V  K  R  R  N  N  R  I  Y  R  G  Q  L  V  S  M  T  *  Q  S  A  A  E  A  A  L  E  E  E  F  C  R  R  L  Q  R  R  R  W  F  D  I  V  A  H  R  R  G  S  L  I  N  L  L  L  L  Q  V  I  L  :  F  Q  W  G  E  E  A  I  T  Q  K  A  V  E  I  V  A  G  E  *  Q  G  *  T  L  S  S  A  S  Q  R  K  K  L  F  L  K  *  Q  R  K  M  R  I  L  K  G  P  V  *  P  M  A  T  E  S  Q  H  I  L  M  P  V  Q  V  V  S  R  W  V  L  G  K  I  T  T  L  *  C  S  L  S  H  L  A  N  D  P  S  R  L  A  M  T  L  S  M  G  S  M  T  G  K  L  S :   F  S  L  A  C  L  R  Q  L  *  K  *  H  L  W  I  D  C  C  T  S  P  R  I  L  F  L  A  K  F  V  P  S  V  V  V  L  L  I  L  A  A  L  Q  K  G :   R  E  E  P  E  L  V  G  N  *  R  S  Y  K  I  L  F  Q  T  W  T  S :   K  R  A  M  L  T  C  W  I  *  Q  C  S  I  F  E  P  F  K  I  R  F  R :   I  *  I  Q  N  L  K  T  A  N  V  D  V  G  N  Q  V  N  N  K  M  G  G  S  T  L  A  E  D  *  L  K  R  I  F  V  T  I  I  L  L  L  R  N  S  N  L  Y  I  W  K  *  I  S  Y  *  F  F  K  A  K  K  *  T  L  F  V  F  F  S  F  P  F  S  S  *  K  T  T  Y  M  I  V  L  D  Y  F  *  F  S  F  F  I  *  H  L  H  F  *  F  I  F  E  F  I  L  L  E  D  H  K  S  *  L  M  M  L  Y  N  Y  F  L  Y  F  I  F   </first_frame>
            <second_frame>  N  K  C  S  T  F  S  F  F  *  F  P  T  C  S  L  P  S  P  H  P  P  T  S  L  S  I  N  F  S  T  S  K  S  *  Q  S  N  S  N  K  L  S  N  V  S  I  I  N  I  F  F  I  T  R  F  N  E  P  H  Q  H  H  R  W  R  R  R  R  W  S  H  S  L  R  F  S  S  G  I  I  F  N  Y  S  S  *  S  R  R  *  R  *  S  R  V  R  F  S  R  I  S  S  L  T  P  W  S  F  T  V  F  S  V  Q  S  S  I  Y  F  V  K  F  R  I  Y  K  *  S  E  G  T  I  E  F  T  E  V  N  W  F  Q  *  L  N  N  R  R  R  K  R  R  W  R  R  S  F  A  D  D  F  N  D  A  V  G  S  T  *  *  L  T  G  E  V  P  *  S  T  C  Y  C  C  R  *  Y  C :   F  N  G  E  R  K  L  *  P  K  R  R  W  R  *  W  P  G  N  N  K  A  E  L  S  A  Q  L  H  N  A  R  S  S  F  S  N  S  R  G  K  *  G  Y  *  R  D  Q  Y  S  Q  W  P  Q  K  V  N  T  F  L  C  Q  C  K  *  F  R  D  G  F  L  G  R  *  Q  L  Y  N  V  L  C  H  T  *  Q  T  I  Q  A  D  *  Q  *  H  C  Q  W  A  R  *  R  G  N  S   : V  S  V  W  L  V  S  D  S  S  R  N  S  I  Y  G  *  I  A  A  H  P  R  G  F  C  S  L  Q  N  S  C  Q  A  W  L  C  Y  S  S  S  Q  H  C  R  K   : G  E  K  N  Q  N  *  W  E  T  K  E  V  T  R  S  C  S  K  H  G  Q   : A  N  E  L  C  *  H  A  G  S  S  S  A  A  Y  S  N  P  S  R  S  G  S   : E  S  E  Y  R  T  *  K  L  Q  M  W  M  *  E  I  K  S  I  T  K  W  E  E  A  L  *  L  K  I  D  L  K  G  F  L  S  P  L  F  C  F  L  E  T  Q  I  C  T  Y  G  S  K  F  H  T  S  F  L  K  L  K  S  E  L  S  L  F  F  F  L  F  P  F  P  V  R  R  L  R  I  *  L  F  W  I  I  S  S  F  L  F  S  S  N  I  Y  I  F  N  L  F  L  S  L  F  C  L  K  I  I  K  A  N  *  *  C  C  T  T  T  F  S  I  S  F  L  </second_frame>
            <third_frame>   T  S  V  A  L  F  H  F  F  N  S  Q  L  A  L  F  P  H  P  T  H  P  P  L  S  L  L  T  S  Q  P  P  N  L  N  N  P  I  R  T  N  Y  Q  M  Y  P  S  S  T  S  S  S  S  Q  G  S  M  S  H  T  S  T  T  A  G  G  A  G  G  G  L  T  R  Y  G  S  A  P  G  S  F  L  T  T  A  V  E  A  V  V  N  G  N  H  E  F  A  S  H  G  S  H  H  S  H  L  G  P  S  R  F  F  Q  S  N  L  A  S  T  S  L  N  S  E  S  T  S  K  A  K  E  Q  S  N  L  Q  R  S  I  G  F  N  D  L  T  I  G  G  G  S  G  A  G  G  G  V  L  P  T  T  S  T  T  P  L  V  R  H  S  S  S  P  A  R  F  L  N  Q  L  A  T  A  A  G  D  T   : V  S  M  G  R  G  S  Y  N  P  K  G  G  G  D  S  G  R  G  I  T  R  L  N  S  Q  L  S  F  T  T  Q  E  A  L  S  Q  I  A  E  E  N  E  D  I  E  G  T  S  I  A  N  G  H  R  K  S  T  H  S  Y  A  S  A  S  S  F  A  M  G  S  W  E  D  N  N  S  I  M  F  S  V  T  P  S  K  R  S  K  Q  I  S  N  D  I  V  N  G  L  D  D  G  E  T  Q  :  F  Q  F  G  L  S  Q  T  A  L  E  I  A  S  M  D  R  L  L  H  I  P  E  D  S  V  P  C  K  I  R  A  K  R  G  C  A  T  H  P  R  S  I  A  E  R  :  E  R  R  T  R  I  S  G  K  L  K  K  L  Q  D  L  V  P  N  M  D  K  :  Q  T  S  Y  A  D  M  L  D  L  A  V  Q  H  I  R  T  L  Q  D  Q  V  Q  :  N  L  N  T  E  L  E  N  C  K  C  G  C  R  K  S  S  Q  *  Q  N  G  R  K  H  F  S  *  R  L  T  *  K  D  F  C  H  H  Y  F  A  S  *  K  L  K  F  V  H  M  E  V  N  F  I  L  V  F  *  S  *  K  V  N  S  L  C  F  F  F  F  S  L  F  Q  L  E  D  Y  V  Y  D  C  F  G  L  F  L  V  F  F  F  H  L  T  F  T  F  L  I  Y  F  *  V  Y  F  A  *  R  S  *  K  L  I  D  D  V  V  Q  L  L  S  L  F  H  F  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17637" stop="18195"/>
                    <exon start="23164" stop="23477"/>
                    <exon start="24130" stop="24267"/>
                    <exon start="24613" stop="24678"/>
                    <exon start="24809" stop="24877"/>
                    <exon start="25208" stop="25264"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1200</number_coding_nucleotides>
                  <number_encoded_amino_acids>400</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSVALFHFFNSQLALFPHPTHPPLSLLTSQPPNLNNPIRTNYQMYPSSTSSSSQGSMSHTSTTAGGAGGGLTRYGSAPGSFLTTAVEAVVNGNHEFASHGSHHSHLGPSRFFQSNLASTSLNSESTSKAKEQSNLQRSIGFNDLTIGGGSGAGGGVLPTTSTTPLVRHSSSPARFLNQLATAAGDTVSMGRGSYNPKGGGDSGRGITRLNSQLSFTTQEALSQIAEENEDIEGTSIANGHRKSTHSYASASSFAMGSWEDNNSIMFSVTPSKRSKQISNDIVNGLDDGETQFQFGLSQTALEIASMDRLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIRTLQDQVQNLNTELENCKCGCRKSSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="17635" e_stop="18195"/>
            <exon e_start="23164" e_stop="23477"/>
            <exon e_start="24130" e_stop="24267"/>
            <exon e_start="24613" e_stop="24678"/>
            <exon e_start="24809" e_stop="24877"/>
            <exon e_start="25208" e_stop="25563"/>
            <exon e_start="26400" e_stop="26419"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="0.934"/>
          <exon-intron don_prob="1.000" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="0.650"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="17635" e_stop="18195" e_length="561"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23164" e_stop="23477" e_length="314"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.937">
            <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24130" e_stop="24267" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24613" e_stop="24678" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="24809" e_stop="24877" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.991">
            <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="25208" e_stop="25563" e_length="356"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.974">
            <gDNA_intron_boundary i_start="25564" i_stop="26399" i_length="836"/>
          </intron>
          <exon e_serial="7" e_score="0.650">
            <gDNA_exon_boundary e_start="26400" e_stop="26419" e_length="20"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17635" stop="18043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
              <exon start="23164" stop="23362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17679" stop="18195"/>
              <exon start="23164" stop="23251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17684" stop="18179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17685" stop="18092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17780" stop="18195"/>
              <exon start="23164" stop="23299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17788" stop="18195"/>
              <exon start="23164" stop="23477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17951" stop="18195"/>
              <exon start="23164" stop="23477"/>
              <exon start="24130" stop="24213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23208" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23448" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25563"/>
              <exon start="26400" stop="26419"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368036" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24209" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420524" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24652" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302680" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACAAGTGTAGCACTTTTTCATTTTTTTAATTCCCAACTTGCTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG : TTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG : TTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG : GAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG : CAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAG : AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACA : AAAATTGAAGATAATAAACA</gDNA_template>
            <first_frame> K  Q  V  *  H  F  F  I  F  L  I  P  N  L  L  S  S  L  T  P  P  T  H  L  S  L  Y  *  L  L  N  L  Q  I  L  T  I  Q  F  E  Q  I  I  K  C  I  H  H  Q  H  L  L  H  H  K  V  Q  *  A  T  P  A  P  P  L  A  A  P  A  V  V  S  L  A  T  V  Q  L  R  D  H  F  *  L  Q  Q  L  K  P  S  L  T  V  I  T  S  S  L  L  T  D  L  I  T  H  T  L  V  L  H  G  F  F  S  P  I  *  H  L  L  R  *  I  P  N  L  Q  V  K  R  R  N  N  R  I  Y  R  G  Q  L  V  S  M  T  *  Q  S  A  A  E  A  A  L  E  E  E  F  C  R  R  L  Q  R  R  R  W  F  D  I  V  A  H  R  R  G  S  L  I  N  L  L  L  L  Q  V  I  L  :  F  Q  W  G  E  E  A  I  T  Q  K  A  V  E  I  V  A  G  E  *  Q  G  *  T  L  S  S  A  S  Q  R  K  K  L  F  L  K  *  Q  R  K  M  R  I  L  K  G  P  V  *  P  M  A  T  E  S  Q  H  I  L  M  P  V  Q  V  V  S  R  W  V  L  G  K  I  T  T  L  *  C  S  L  S  H  L  A  N  D  P  S  R  L  A  M  T  L  S  M  G  S  M  T  G  K  L  S :   F  S  L  A  C  L  R  Q  L  *  K  *  H  L  W  I  D  C  C  T  S  P  R  I  L  F  L  A  K  F  V  P  S  V  V  V  L  L  I  L  A  A  L  Q  K  G :   R  E  E  P  E  L  V  G  N  *  R  S  Y  K  I  L  F  Q  T  W  T  S :   K  R  A  M  L  T  C  W  I  *  Q  C  S  I  F  E  P  F  K  I  R  F  R :   I  *  I  Q  N  L  K  T  A  N  V  D  V  G  N  Q  V  N  N  K  M  G  G  S  T  L  A  E  D  *  L  K  R  I  F  V  T  I  I  L  L  L  R  N  S  N  L  Y  I  W  K  *  I  S  Y  *  F  F  K  A  K  K  *  T  L  F  V  F  F  S  F  P  F  S  S  *  K  T  T  Y  M  I  V  L  D  Y  F  *  F  S  F  F  I  *  H  L  H  F  *  F  I  F  E  F  I  L  L  E  D  H  K  S  *  L  M  M  L  Y   : K  N  *  R  *  *  T </first_frame>
            <second_frame>  N  K  C  S  T  F  S  F  F  *  F  P  T  C  S  L  P  S  P  H  P  P  T  S  L  S  I  N  F  S  T  S  K  S  *  Q  S  N  S  N  K  L  S  N  V  S  I  I  N  I  F  F  I  T  R  F  N  E  P  H  Q  H  H  R  W  R  R  R  R  W  S  H  S  L  R  F  S  S  G  I  I  F  N  Y  S  S  *  S  R  R  *  R  *  S  R  V  R  F  S  R  I  S  S  L  T  P  W  S  F  T  V  F  S  V  Q  S  S  I  Y  F  V  K  F  R  I  Y  K  *  S  E  G  T  I  E  F  T  E  V  N  W  F  Q  *  L  N  N  R  R  R  K  R  R  W  R  R  S  F  A  D  D  F  N  D  A  V  G  S  T  *  *  L  T  G  E  V  P  *  S  T  C  Y  C  C  R  *  Y  C :   F  N  G  E  R  K  L  *  P  K  R  R  W  R  *  W  P  G  N  N  K  A  E  L  S  A  Q  L  H  N  A  R  S  S  F  S  N  S  R  G  K  *  G  Y  *  R  D  Q  Y  S  Q  W  P  Q  K  V  N  T  F  L  C  Q  C  K  *  F  R  D  G  F  L  G  R  *  Q  L  Y  N  V  L  C  H  T  *  Q  T  I  Q  A  D  *  Q  *  H  C  Q  W  A  R  *  R  G  N  S   : V  S  V  W  L  V  S  D  S  S  R  N  S  I  Y  G  *  I  A  A  H  P  R  G  F  C  S  L  Q  N  S  C  Q  A  W  L  C  Y  S  S  S  Q  H  C  R  K   : G  E  K  N  Q  N  *  W  E  T  K  E  V  T  R  S  C  S  K  H  G  Q   : A  N  E  L  C  *  H  A  G  S  S  S  A  A  Y  S  N  P  S  R  S  G  S   : E  S  E  Y  R  T  *  K  L  Q  M  W  M  *  E  I  K  S  I  T  K  W  E  E  A  L  *  L  K  I  D  L  K  G  F  L  S  P  L  F  C  F  L  E  T  Q  I  C  T  Y  G  S  K  F  H  T  S  F  L  K  L  K  S  E  L  S  L  F  F  F  L  F  P  F  P  V  R  R  L  R  I  *  L  F  W  I  I  S  S  F  L  F  S  S  N  I  Y  I  F  N  L  F  L  S  L  F  C  L  K  I  I  K  A  N  *  *  C  C  T  :  K  I  E  D  N  K   </second_frame>
            <third_frame>   T  S  V  A  L  F  H  F  F  N  S  Q  L  A  L  F  P  H  P  T  H  P  P  L  S  L  L  T  S  Q  P  P  N  L  N  N  P  I  R  T  N  Y  Q  M  Y  P  S  S  T  S  S  S  S  Q  G  S  M  S  H  T  S  T  T  A  G  G  A  G  G  G  L  T  R  Y  G  S  A  P  G  S  F  L  T  T  A  V  E  A  V  V  N  G  N  H  E  F  A  S  H  G  S  H  H  S  H  L  G  P  S  R  F  F  Q  S  N  L  A  S  T  S  L  N  S  E  S  T  S  K  A  K  E  Q  S  N  L  Q  R  S  I  G  F  N  D  L  T  I  G  G  G  S  G  A  G  G  G  V  L  P  T  T  S  T  T  P  L  V  R  H  S  S  S  P  A  R  F  L  N  Q  L  A  T  A  A  G  D  T   : V  S  M  G  R  G  S  Y  N  P  K  G  G  G  D  S  G  R  G  I  T  R  L  N  S  Q  L  S  F  T  T  Q  E  A  L  S  Q  I  A  E  E  N  E  D  I  E  G  T  S  I  A  N  G  H  R  K  S  T  H  S  Y  A  S  A  S  S  F  A  M  G  S  W  E  D  N  N  S  I  M  F  S  V  T  P  S  K  R  S  K  Q  I  S  N  D  I  V  N  G  L  D  D  G  E  T  Q  :  F  Q  F  G  L  S  Q  T  A  L  E  I  A  S  M  D  R  L  L  H  I  P  E  D  S  V  P  C  K  I  R  A  K  R  G  C  A  T  H  P  R  S  I  A  E  R  :  E  R  R  T  R  I  S  G  K  L  K  K  L  Q  D  L  V  P  N  M  D  K  :  Q  T  S  Y  A  D  M  L  D  L  A  V  Q  H  I  R  T  L  Q  D  Q  V  Q  :  N  L  N  T  E  L  E  N  C  K  C  G  C  R  K  S  S  Q  *  Q  N  G  R  K  H  F  S  *  R  L  T  *  K  D  F  C  H  H  Y  F  A  S  *  K  L  K  F  V  H  M  E  V  N  F  I  L  V  F  *  S  *  K  V  N  S  L  C  F  F  F  F  S  L  F  Q  L  E  D  Y  V  Y  D  C  F  G  L  F  L  V  F  F  F  H  L  T  F  T  F  L  I  Y  F  *  V  Y  F  A  *  R  S  *  K  L  I  D  D  V  V  Q :   K  L  K  I  I  N  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17637" stop="18195"/>
                    <exon start="23164" stop="23477"/>
                    <exon start="24130" stop="24267"/>
                    <exon start="24613" stop="24678"/>
                    <exon start="24809" stop="24877"/>
                    <exon start="25208" stop="25264"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1200</number_coding_nucleotides>
                  <number_encoded_amino_acids>400</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSVALFHFFNSQLALFPHPTHPPLSLLTSQPPNLNNPIRTNYQMYPSSTSSSSQGSMSHTSTTAGGAGGGLTRYGSAPGSFLTTAVEAVVNGNHEFASHGSHHSHLGPSRFFQSNLASTSLNSESTSKAKEQSNLQRSIGFNDLTIGGGSGAGGGVLPTTSTTPLVRHSSSPARFLNQLATAAGDTVSMGRGSYNPKGGGDSGRGITRLNSQLSFTTQEALSQIAEENEDIEGTSIANGHRKSTHSYASASSFAMGSWEDNNSIMFSVTPSKRSKQISNDIVNGLDDGETQFQFGLSQTALEIASMDRLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIRTLQDQVQNLNTELENCKCGCRKSSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="17635" e_stop="18195"/>
            <exon e_start="23164" e_stop="23477"/>
            <exon e_start="24130" e_stop="24267"/>
            <exon e_start="24613" e_stop="24678"/>
            <exon e_start="24809" e_stop="24877"/>
            <exon e_start="25208" e_stop="25492"/>
            <exon e_start="26400" e_stop="26420"/>
            <exon e_start="26516" e_stop="26523"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="0.934"/>
          <exon-intron don_prob="1.000" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.974" e_score="0.951"/>
          <exon-intron don_prob="0.963" acc_prob="0.941" e_score="0.619"/>
          <exon-only e_score="0.500"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="17635" e_stop="18195" e_length="561"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23164" e_stop="23477" e_length="314"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.937">
            <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24130" e_stop="24267" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24613" e_stop="24678" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="24809" e_stop="24877" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.991">
            <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330"/>
          </intron>
          <exon e_serial="6" e_score="0.951">
            <gDNA_exon_boundary e_start="25208" e_stop="25492" e_length="285"/>
          </exon>
          <intron i_serial="6" don_prob="0.000" acc_prob="0.974">
            <gDNA_intron_boundary i_start="25493" i_stop="26399" i_length="907"/>
          </intron>
          <exon e_serial="7" e_score="0.619">
            <gDNA_exon_boundary e_start="26400" e_stop="26420" e_length="21"/>
          </exon>
          <intron i_serial="7" don_prob="0.963" acc_prob="0.941">
            <gDNA_intron_boundary i_start="26421" i_stop="26515" i_length="95"/>
          </intron>
          <exon e_serial="8" e_score="0.500">
            <gDNA_exon_boundary e_start="26516" e_stop="26523" e_length="8"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17635" stop="18043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
              <exon start="23164" stop="23362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17679" stop="18195"/>
              <exon start="23164" stop="23251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17684" stop="18179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17685" stop="18092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17780" stop="18195"/>
              <exon start="23164" stop="23299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17788" stop="18195"/>
              <exon start="23164" stop="23477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17951" stop="18195"/>
              <exon start="23164" stop="23477"/>
              <exon start="24130" stop="24213"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E480214" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23208" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24209" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420524" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24839" stop="24877"/>
              <exon start="25208" stop="25492"/>
              <exon start="26400" stop="26420"/>
              <exon start="26516" stop="26523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E434568" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACAAGTGTAGCACTTTTTCATTTTTTTAATTCCCAACTTGCTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG : TTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG : TTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG : GAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG : CAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAG : AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACA : AAAATTGAAGATAATAAACAG : GAAGCCAG</gDNA_template>
            <first_frame> K  Q  V  *  H  F  F  I  F  L  I  P  N  L  L  S  S  L  T  P  P  T  H  L  S  L  Y  *  L  L  N  L  Q  I  L  T  I  Q  F  E  Q  I  I  K  C  I  H  H  Q  H  L  L  H  H  K  V  Q  *  A  T  P  A  P  P  L  A  A  P  A  V  V  S  L  A  T  V  Q  L  R  D  H  F  *  L  Q  Q  L  K  P  S  L  T  V  I  T  S  S  L  L  T  D  L  I  T  H  T  L  V  L  H  G  F  F  S  P  I  *  H  L  L  R  *  I  P  N  L  Q  V  K  R  R  N  N  R  I  Y  R  G  Q  L  V  S  M  T  *  Q  S  A  A  E  A  A  L  E  E  E  F  C  R  R  L  Q  R  R  R  W  F  D  I  V  A  H  R  R  G  S  L  I  N  L  L  L  L  Q  V  I  L  :  F  Q  W  G  E  E  A  I  T  Q  K  A  V  E  I  V  A  G  E  *  Q  G  *  T  L  S  S  A  S  Q  R  K  K  L  F  L  K  *  Q  R  K  M  R  I  L  K  G  P  V  *  P  M  A  T  E  S  Q  H  I  L  M  P  V  Q  V  V  S  R  W  V  L  G  K  I  T  T  L  *  C  S  L  S  H  L  A  N  D  P  S  R  L  A  M  T  L  S  M  G  S  M  T  G  K  L  S :   F  S  L  A  C  L  R  Q  L  *  K  *  H  L  W  I  D  C  C  T  S  P  R  I  L  F  L  A  K  F  V  P  S  V  V  V  L  L  I  L  A  A  L  Q  K  G :   R  E  E  P  E  L  V  G  N  *  R  S  Y  K  I  L  F  Q  T  W  T  S :   K  R  A  M  L  T  C  W  I  *  Q  C  S  I  F  E  P  F  K  I  R  F  R :   I  *  I  Q  N  L  K  T  A  N  V  D  V  G  N  Q  V  N  N  K  M  G  G  S  T  L  A  E  D  *  L  K  R  I  F  V  T  I  I  L  L  L  R  N  S  N  L  Y  I  W  K  *  I  S  Y  *  F  F  K  A  K  K  *  T  L  F  V  F  F  S  F  P  F  S  S  *  K  T  T  Y  M  I  V  L  D  Y  F  *  F  S  F  F  I  *  Q :   K  L  K  I  I  N  R :   K  P  </first_frame>
            <second_frame>  N  K  C  S  T  F  S  F  F  *  F  P  T  C  S  L  P  S  P  H  P  P  T  S  L  S  I  N  F  S  T  S  K  S  *  Q  S  N  S  N  K  L  S  N  V  S  I  I  N  I  F  F  I  T  R  F  N  E  P  H  Q  H  H  R  W  R  R  R  R  W  S  H  S  L  R  F  S  S  G  I  I  F  N  Y  S  S  *  S  R  R  *  R  *  S  R  V  R  F  S  R  I  S  S  L  T  P  W  S  F  T  V  F  S  V  Q  S  S  I  Y  F  V  K  F  R  I  Y  K  *  S  E  G  T  I  E  F  T  E  V  N  W  F  Q  *  L  N  N  R  R  R  K  R  R  W  R  R  S  F  A  D  D  F  N  D  A  V  G  S  T  *  *  L  T  G  E  V  P  *  S  T  C  Y  C  C  R  *  Y  C :   F  N  G  E  R  K  L  *  P  K  R  R  W  R  *  W  P  G  N  N  K  A  E  L  S  A  Q  L  H  N  A  R  S  S  F  S  N  S  R  G  K  *  G  Y  *  R  D  Q  Y  S  Q  W  P  Q  K  V  N  T  F  L  C  Q  C  K  *  F  R  D  G  F  L  G  R  *  Q  L  Y  N  V  L  C  H  T  *  Q  T  I  Q  A  D  *  Q  *  H  C  Q  W  A  R  *  R  G  N  S   : V  S  V  W  L  V  S  D  S  S  R  N  S  I  Y  G  *  I  A  A  H  P  R  G  F  C  S  L  Q  N  S  C  Q  A  W  L  C  Y  S  S  S  Q  H  C  R  K   : G  E  K  N  Q  N  *  W  E  T  K  E  V  T  R  S  C  S  K  H  G  Q   : A  N  E  L  C  *  H  A  G  S  S  S  A  A  Y  S  N  P  S  R  S  G  S   : E  S  E  Y  R  T  *  K  L  Q  M  W  M  *  E  I  K  S  I  T  K  W  E  E  A  L  *  L  K  I  D  L  K  G  F  L  S  P  L  F  C  F  L  E  T  Q  I  C  T  Y  G  S  K  F  H  T  S  F  L  K  L  K  S  E  L  S  L  F  F  F  L  F  P  F  P  V  R  R  L  R  I  *  L  F  W  I  I  S  S  F  L  F  S  S  N   : K  N  *  R  *  *  T   : G  S  Q </second_frame>
            <third_frame>   T  S  V  A  L  F  H  F  F  N  S  Q  L  A  L  F  P  H  P  T  H  P  P  L  S  L  L  T  S  Q  P  P  N  L  N  N  P  I  R  T  N  Y  Q  M  Y  P  S  S  T  S  S  S  S  Q  G  S  M  S  H  T  S  T  T  A  G  G  A  G  G  G  L  T  R  Y  G  S  A  P  G  S  F  L  T  T  A  V  E  A  V  V  N  G  N  H  E  F  A  S  H  G  S  H  H  S  H  L  G  P  S  R  F  F  Q  S  N  L  A  S  T  S  L  N  S  E  S  T  S  K  A  K  E  Q  S  N  L  Q  R  S  I  G  F  N  D  L  T  I  G  G  G  S  G  A  G  G  G  V  L  P  T  T  S  T  T  P  L  V  R  H  S  S  S  P  A  R  F  L  N  Q  L  A  T  A  A  G  D  T   : V  S  M  G  R  G  S  Y  N  P  K  G  G  G  D  S  G  R  G  I  T  R  L  N  S  Q  L  S  F  T  T  Q  E  A  L  S  Q  I  A  E  E  N  E  D  I  E  G  T  S  I  A  N  G  H  R  K  S  T  H  S  Y  A  S  A  S  S  F  A  M  G  S  W  E  D  N  N  S  I  M  F  S  V  T  P  S  K  R  S  K  Q  I  S  N  D  I  V  N  G  L  D  D  G  E  T  Q  :  F  Q  F  G  L  S  Q  T  A  L  E  I  A  S  M  D  R  L  L  H  I  P  E  D  S  V  P  C  K  I  R  A  K  R  G  C  A  T  H  P  R  S  I  A  E  R  :  E  R  R  T  R  I  S  G  K  L  K  K  L  Q  D  L  V  P  N  M  D  K  :  Q  T  S  Y  A  D  M  L  D  L  A  V  Q  H  I  R  T  L  Q  D  Q  V  Q  :  N  L  N  T  E  L  E  N  C  K  C  G  C  R  K  S  S  Q  *  Q  N  G  R  K  H  F  S  *  R  L  T  *  K  D  F  C  H  H  Y  F  A  S  *  K  L  K  F  V  H  M  E  V  N  F  I  L  V  F  *  S  *  K  V  N  S  L  C  F  F  F  F  S  L  F  Q  L  E  D  Y  V  Y  D  C  F  G  L  F  L  V  F  F  F  H  L  T  :  K  I  E  D  N  K  Q  :  E  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17637" stop="18195"/>
                    <exon start="23164" stop="23477"/>
                    <exon start="24130" stop="24267"/>
                    <exon start="24613" stop="24678"/>
                    <exon start="24809" stop="24877"/>
                    <exon start="25208" stop="25264"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1200</number_coding_nucleotides>
                  <number_encoded_amino_acids>400</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSVALFHFFNSQLALFPHPTHPPLSLLTSQPPNLNNPIRTNYQMYPSSTSSSSQGSMSHTSTTAGGAGGGLTRYGSAPGSFLTTAVEAVVNGNHEFASHGSHHSHLGPSRFFQSNLASTSLNSESTSKAKEQSNLQRSIGFNDLTIGGGSGAGGGVLPTTSTTPLVRHSSSPARFLNQLATAAGDTVSMGRGSYNPKGGGDSGRGITRLNSQLSFTTQEALSQIAEENEDIEGTSIANGHRKSTHSYASASSFAMGSWEDNNSIMFSVTPSKRSKQISNDIVNGLDDGETQFQFGLSQTALEIASMDRLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIRTLQDQVQNLNTELENCKCGCRKSSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="17635" e_stop="18195"/>
            <exon e_start="23155" e_stop="23477"/>
            <exon e_start="24130" e_stop="24267"/>
            <exon e_start="24613" e_stop="24678"/>
            <exon e_start="24809" e_stop="24877"/>
            <exon e_start="25208" e_stop="25588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.780" e_score="0.929"/>
          <exon-intron don_prob="1.000" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="17635" e_stop="18195" e_length="561"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.780">
            <gDNA_intron_boundary i_start="18196" i_stop="23154" i_length="4959"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23155" e_stop="23477" e_length="323"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.937">
            <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="24130" e_stop="24267" e_length="138"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24613" e_stop="24678" e_length="66"/>
          </exon>
          <intron i_serial="4" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="24809" e_stop="24877" e_length="69"/>
          </exon>
          <intron i_serial="5" don_prob="0.994" acc_prob="0.991">
            <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330"/>
          </intron>
          <exon e_serial="6" e_score="0.961">
            <gDNA_exon_boundary e_start="25208" e_stop="25588" e_length="381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17635" stop="18043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17684" stop="18179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17685" stop="18092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17761" stop="18195"/>
              <exon start="23155" stop="23451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E573031" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23208" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416758" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24209" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420524" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617954" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24652" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302680" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="4" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACAAGTGTAGCACTTTTTCATTTTTTTAATTCCCAACTTGCTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG : GATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG : TTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG : GAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG : CAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAG : AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACAACTACTTTCTCTATTTCATTTTTAT</gDNA_template>
            <first_frame> K  Q  V  *  H  F  F  I  F  L  I  P  N  L  L  S  S  L  T  P  P  T  H  L  S  L  Y  *  L  L  N  L  Q  I  L  T  I  Q  F  E  Q  I  I  K  C  I  H  H  Q  H  L  L  H  H  K  V  Q  *  A  T  P  A  P  P  L  A  A  P  A  V  V  S  L  A  T  V  Q  L  R  D  H  F  *  L  Q  Q  L  K  P  S  L  T  V  I  T  S  S  L  L  T  D  L  I  T  H  T  L  V  L  H  G  F  F  S  P  I  *  H  L  L  R  *  I  P  N  L  Q  V  K  R  R  N  N  R  I  Y  R  G  Q  L  V  S  M  T  *  Q  S  A  A  E  A  A  L  E  E  E  F  C  R  R  L  Q  R  R  R  W  F  D  I  V  A  H  R  R  G  S  L  I  N  L  L  L  L  Q  V  I  L  :  D  F  Q  F  Q  W  G  E  E  A  I  T  Q  K  A  V  E  I  V  A  G  E  *  Q  G  *  T  L  S  S  A  S  Q  R  K  K  L  F  L  K  *  Q  R  K  M  R  I  L  K  G  P  V  *  P  M  A  T  E  S  Q  H  I  L  M  P  V  Q  V  V  S  R  W  V  L  G  K  I  T  T  L  *  C  S  L  S  H  L  A  N  D  P  S  R  L  A  M  T  L  S  M  G  S  M  T  G  K  L  S :   F  S  L  A  C  L  R  Q  L  *  K  *  H  L  W  I  D  C  C  T  S  P  R  I  L  F  L  A  K  F  V  P  S  V  V  V  L  L  I  L  A  A  L  Q  K  G :   R  E  E  P  E  L  V  G  N  *  R  S  Y  K  I  L  F  Q  T  W  T  S :   K  R  A  M  L  T  C  W  I  *  Q  C  S  I  F  E  P  F  K  I  R  F  R :   I  *  I  Q  N  L  K  T  A  N  V  D  V  G  N  Q  V  N  N  K  M  G  G  S  T  L  A  E  D  *  L  K  R  I  F  V  T  I  I  L  L  L  R  N  S  N  L  Y  I  W  K  *  I  S  Y  *  F  F  K  A  K  K  *  T  L  F  V  F  F  S  F  P  F  S  S  *  K  T  T  Y  M  I  V  L  D  Y  F  *  F  S  F  F  I  *  H  L  H  F  *  F  I  F  E  F  I  L  L  E  D  H  K  S  *  L  M  M  L  Y  N  Y  F  L  Y  F  I  F   </first_frame>
            <second_frame>  N  K  C  S  T  F  S  F  F  *  F  P  T  C  S  L  P  S  P  H  P  P  T  S  L  S  I  N  F  S  T  S  K  S  *  Q  S  N  S  N  K  L  S  N  V  S  I  I  N  I  F  F  I  T  R  F  N  E  P  H  Q  H  H  R  W  R  R  R  R  W  S  H  S  L  R  F  S  S  G  I  I  F  N  Y  S  S  *  S  R  R  *  R  *  S  R  V  R  F  S  R  I  S  S  L  T  P  W  S  F  T  V  F  S  V  Q  S  S  I  Y  F  V  K  F  R  I  Y  K  *  S  E  G  T  I  E  F  T  E  V  N  W  F  Q  *  L  N  N  R  R  R  K  R  R  W  R  R  S  F  A  D  D  F  N  D  A  V  G  S  T  *  *  L  T  G  E  V  P  *  S  T  C  Y  C  C  R  *  Y  W :   I  F  S  F  N  G  E  R  K  L  *  P  K  R  R  W  R  *  W  P  G  N  N  K  A  E  L  S  A  Q  L  H  N  A  R  S  S  F  S  N  S  R  G  K  *  G  Y  *  R  D  Q  Y  S  Q  W  P  Q  K  V  N  T  F  L  C  Q  C  K  *  F  R  D  G  F  L  G  R  *  Q  L  Y  N  V  L  C  H  T  *  Q  T  I  Q  A  D  *  Q  *  H  C  Q  W  A  R  *  R  G  N  S   : V  S  V  W  L  V  S  D  S  S  R  N  S  I  Y  G  *  I  A  A  H  P  R  G  F  C  S  L  Q  N  S  C  Q  A  W  L  C  Y  S  S  S  Q  H  C  R  K   : G  E  K  N  Q  N  *  W  E  T  K  E  V  T  R  S  C  S  K  H  G  Q   : A  N  E  L  C  *  H  A  G  S  S  S  A  A  Y  S  N  P  S  R  S  G  S   : E  S  E  Y  R  T  *  K  L  Q  M  W  M  *  E  I  K  S  I  T  K  W  E  E  A  L  *  L  K  I  D  L  K  G  F  L  S  P  L  F  C  F  L  E  T  Q  I  C  T  Y  G  S  K  F  H  T  S  F  L  K  L  K  S  E  L  S  L  F  F  F  L  F  P  F  P  V  R  R  L  R  I  *  L  F  W  I  I  S  S  F  L  F  S  S  N  I  Y  I  F  N  L  F  L  S  L  F  C  L  K  I  I  K  A  N  *  *  C  C  T  T  T  F  S  I  S  F  L  </second_frame>
            <third_frame>   T  S  V  A  L  F  H  F  F  N  S  Q  L  A  L  F  P  H  P  T  H  P  P  L  S  L  L  T  S  Q  P  P  N  L  N  N  P  I  R  T  N  Y  Q  M  Y  P  S  S  T  S  S  S  S  Q  G  S  M  S  H  T  S  T  T  A  G  G  A  G  G  G  L  T  R  Y  G  S  A  P  G  S  F  L  T  T  A  V  E  A  V  V  N  G  N  H  E  F  A  S  H  G  S  H  H  S  H  L  G  P  S  R  F  F  Q  S  N  L  A  S  T  S  L  N  S  E  S  T  S  K  A  K  E  Q  S  N  L  Q  R  S  I  G  F  N  D  L  T  I  G  G  G  S  G  A  G  G  G  V  L  P  T  T  S  T  T  P  L  V  R  H  S  S  S  P  A  R  F  L  N  Q  L  A  T  A  A  G  D  T   : G  F  S  V  S  M  G  R  G  S  Y  N  P  K  G  G  G  D  S  G  R  G  I  T  R  L  N  S  Q  L  S  F  T  T  Q  E  A  L  S  Q  I  A  E  E  N  E  D  I  E  G  T  S  I  A  N  G  H  R  K  S  T  H  S  Y  A  S  A  S  S  F  A  M  G  S  W  E  D  N  N  S  I  M  F  S  V  T  P  S  K  R  S  K  Q  I  S  N  D  I  V  N  G  L  D  D  G  E  T  Q  :  F  Q  F  G  L  S  Q  T  A  L  E  I  A  S  M  D  R  L  L  H  I  P  E  D  S  V  P  C  K  I  R  A  K  R  G  C  A  T  H  P  R  S  I  A  E  R  :  E  R  R  T  R  I  S  G  K  L  K  K  L  Q  D  L  V  P  N  M  D  K  :  Q  T  S  Y  A  D  M  L  D  L  A  V  Q  H  I  R  T  L  Q  D  Q  V  Q  :  N  L  N  T  E  L  E  N  C  K  C  G  C  R  K  S  S  Q  *  Q  N  G  R  K  H  F  S  *  R  L  T  *  K  D  F  C  H  H  Y  F  A  S  *  K  L  K  F  V  H  M  E  V  N  F  I  L  V  F  *  S  *  K  V  N  S  L  C  F  F  F  F  S  L  F  Q  L  E  D  Y  V  Y  D  C  F  G  L  F  L  V  F  F  F  H  L  T  F  T  F  L  I  Y  F  *  V  Y  F  A  *  R  S  *  K  L  I  D  D  V  V  Q  L  L  S  L  F  H  F  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17637" stop="18195"/>
                    <exon start="23155" stop="23477"/>
                    <exon start="24130" stop="24267"/>
                    <exon start="24613" stop="24678"/>
                    <exon start="24809" stop="24877"/>
                    <exon start="25208" stop="25264"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1209</number_coding_nucleotides>
                  <number_encoded_amino_acids>403</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSVALFHFFNSQLALFPHPTHPPLSLLTSQPPNLNNPIRTNYQMYPSSTSSSSQGSMSHTSTTAGGAGGGLTRYGSAPGSFLTTAVEAVVNGNHEFASHGSHHSHLGPSRFFQSNLASTSLNSESTSKAKEQSNLQRSIGFNDLTIGGGSGAGGGVLPTTSTTPLVRHSSSPARFLNQLATAAGDTGFSVSMGRGSYNPKGGGDSGRGITRLNSQLSFTTQEALSQIAEENEDIEGTSIANGHRKSTHSYASASSFAMGSWEDNNSIMFSVTPSKRSKQISNDIVNGLDDGETQFQFGLSQTALEIASMDRLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIRTLQDQVQNLNTELENCKCGCRKSSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="17635" e_stop="18195"/>
            <exon e_start="23164" e_stop="23477"/>
            <exon e_start="23817" e_stop="24119"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="0.934"/>
          <exon-intron don_prob="1.000" acc_prob="0.968" e_score="1.000"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.934">
            <gDNA_exon_boundary e_start="17635" e_stop="18195" e_length="561"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="18196" i_stop="23163" i_length="4968"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23164" e_stop="23477" e_length="314"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.968">
            <gDNA_intron_boundary i_start="23478" i_stop="23816" i_length="339"/>
          </intron>
          <exon e_serial="3" e_score="0.977">
            <gDNA_exon_boundary e_start="23817" e_stop="24119" e_length="303"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17635" stop="18043"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E439358" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
              <exon start="23164" stop="23362"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E452961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17677" stop="18195"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E424645" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17679" stop="18195"/>
              <exon start="23164" stop="23251"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474961" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17684" stop="18179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416757" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17685" stop="18092"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E312877" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17780" stop="18195"/>
              <exon start="23164" stop="23299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302506" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17788" stop="18195"/>
              <exon start="23164" stop="23477"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E574282" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="18130" stop="18195"/>
              <exon start="23164" stop="23477"/>
              <exon start="23817" stop="24119"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302507" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="5" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACAAGTGTAGCACTTTTTCATTTTTTTAATTCCCAACTTGCTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACGGTAATCACGAGTTCGCTTCTCACGGATCTCATCACTCACACCTTGGTCCTTCACGGTTTTTTCAGTCCAATCTAGCATCTACTTCGTTAAATTCCGAATCTACAAGTAAAGCGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG : TTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG : CTAATATGAACTTGAAGGTCACTATCAGAAAACACATAAACCTTCACCGTTTGACATCTGTGTTTTCAACATGTAAACGGCGATAGATATACTTCCTTTACATTTTTCCCCTTAACAACCTTACAACTACATTCTGTGTATGTGTTTCTTTTCTTTCTGCAGAAGTATGTAAAATAAAATAGACAAAATAATCCATGTTGGCATACTCAATCATGTTTCTCGTGTGTAACTCACACAAAAATTGATGAAAACTGCATTTTTATTACTTGTGGGAGGATGAACTGATGTTTTTCGATTTTTGAA</gDNA_template>
            <first_frame> K  Q  V  *  H  F  F  I  F  L  I  P  N  L  L  S  S  L  T  P  P  T  H  L  S  L  Y  *  L  L  N  L  Q  I  L  T  I  Q  F  E  Q  I  I  K  C  I  H  H  Q  H  L  L  H  H  K  V  Q  *  A  T  P  A  P  P  L  A  A  P  A  V  V  S  L  A  T  V  Q  L  R  D  H  F  *  L  Q  Q  L  K  P  S  L  T  V  I  T  S  S  L  L  T  D  L  I  T  H  T  L  V  L  H  G  F  F  S  P  I  *  H  L  L  R  *  I  P  N  L  Q  V  K  R  R  N  N  R  I  Y  R  G  Q  L  V  S  M  T  *  Q  S  A  A  E  A  A  L  E  E  E  F  C  R  R  L  Q  R  R  R  W  F  D  I  V  A  H  R  R  G  S  L  I  N  L  L  L  L  Q  V  I  L  :  F  Q  W  G  E  E  A  I  T  Q  K  A  V  E  I  V  A  G  E  *  Q  G  *  T  L  S  S  A  S  Q  R  K  K  L  F  L  K  *  Q  R  K  M  R  I  L  K  G  P  V  *  P  M  A  T  E  S  Q  H  I  L  M  P  V  Q  V  V  S  R  W  V  L  G  K  I  T  T  L  *  C  S  L  S  H  L  A  N  D  P  S  R  L  A  M  T  L  S  M  G  S  M  T  G  K  L  S :   *  Y  E  L  E  G  H  Y  Q  K  T  H  K  P  S  P  F  D  I  C  V  F  N  M  *  T  A  I  D  I  L  P  L  H  F  S  P  *  Q  P  Y  N  Y  I  L  C  M  C  F  F  S  F  C  R  S  M  *  N  K  I  D  K  I  I  H  V  G  I  L  N  H  V  S  R  V  *  L  T  Q  K  L  M  K  T  A  F  L  L  L  V  G  G  *  T  D  V  F  R  F  L   </first_frame>
            <second_frame>  N  K  C  S  T  F  S  F  F  *  F  P  T  C  S  L  P  S  P  H  P  P  T  S  L  S  I  N  F  S  T  S  K  S  *  Q  S  N  S  N  K  L  S  N  V  S  I  I  N  I  F  F  I  T  R  F  N  E  P  H  Q  H  H  R  W  R  R  R  R  W  S  H  S  L  R  F  S  S  G  I  I  F  N  Y  S  S  *  S  R  R  *  R  *  S  R  V  R  F  S  R  I  S  S  L  T  P  W  S  F  T  V  F  S  V  Q  S  S  I  Y  F  V  K  F  R  I  Y  K  *  S  E  G  T  I  E  F  T  E  V  N  W  F  Q  *  L  N  N  R  R  R  K  R  R  W  R  R  S  F  A  D  D  F  N  D  A  V  G  S  T  *  *  L  T  G  E  V  P  *  S  T  C  Y  C  C  R  *  Y  C :   F  N  G  E  R  K  L  *  P  K  R  R  W  R  *  W  P  G  N  N  K  A  E  L  S  A  Q  L  H  N  A  R  S  S  F  S  N  S  R  G  K  *  G  Y  *  R  D  Q  Y  S  Q  W  P  Q  K  V  N  T  F  L  C  Q  C  K  *  F  R  D  G  F  L  G  R  *  Q  L  Y  N  V  L  C  H  T  *  Q  T  I  Q  A  D  *  Q  *  H  C  Q  W  A  R  *  R  G  N  S   : A  N  M  N  L  K  V  T  I  R  K  H  I  N  L  H  R  L  T  S  V  F  S  T  C  K  R  R  *  I  Y  F  L  Y  I  F  P  L  N  N  L  T  T  T  F  C  V  C  V  S  F  L  S  A  E  V  C  K  I  K  *  T  K  *  S  M  L  A  Y  S  I  M  F  L  V  C  N  S  H  K  N  *  *  K  L  H  F  Y  Y  L  W  E  D  E  L  M  F  F  D  F  *  </second_frame>
            <third_frame>   T  S  V  A  L  F  H  F  F  N  S  Q  L  A  L  F  P  H  P  T  H  P  P  L  S  L  L  T  S  Q  P  P  N  L  N  N  P  I  R  T  N  Y  Q  M  Y  P  S  S  T  S  S  S  S  Q  G  S  M  S  H  T  S  T  T  A  G  G  A  G  G  G  L  T  R  Y  G  S  A  P  G  S  F  L  T  T  A  V  E  A  V  V  N  G  N  H  E  F  A  S  H  G  S  H  H  S  H  L  G  P  S  R  F  F  Q  S  N  L  A  S  T  S  L  N  S  E  S  T  S  K  A  K  E  Q  S  N  L  Q  R  S  I  G  F  N  D  L  T  I  G  G  G  S  G  A  G  G  G  V  L  P  T  T  S  T  T  P  L  V  R  H  S  S  S  P  A  R  F  L  N  Q  L  A  T  A  A  G  D  T   : V  S  M  G  R  G  S  Y  N  P  K  G  G  G  D  S  G  R  G  I  T  R  L  N  S  Q  L  S  F  T  T  Q  E  A  L  S  Q  I  A  E  E  N  E  D  I  E  G  T  S  I  A  N  G  H  R  K  S  T  H  S  Y  A  S  A  S  S  F  A  M  G  S  W  E  D  N  N  S  I  M  F  S  V  T  P  S  K  R  S  K  Q  I  S  N  D  I  V  N  G  L  D  D  G  E  T  Q  :  L  I  *  T  *  R  S  L  S  E  N  T  *  T  F  T  V  *  H  L  C  F  Q  H  V  N  G  D  R  Y  T  S  F  T  F  F  P  L  T  T  L  Q  L  H  S  V  Y  V  F  L  F  F  L  Q  K  Y  V  K  *  N  R  Q  N  N  P  C  W  H  T  Q  S  C  F  S  C  V  T  H  T  K  I  D  E  N  C  I  F  I  T  C  G  R  M  N  *  C  F  S  I  F  E </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17637" stop="18195"/>
                    <exon start="23164" stop="23477"/>
                    <exon start="23817" stop="23825"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>879</number_coding_nucleotides>
                  <number_encoded_amino_acids>293</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TSVALFHFFNSQLALFPHPTHPPLSLLTSQPPNLNNPIRTNYQMYPSSTSSSSQGSMSHTSTTAGGAGGGLTRYGSAPGSFLTTAVEAVVNGNHEFASHGSHHSHLGPSRFFQSNLASTSLNSESTSKAKEQSNLQRSIGFNDLTIGGGSGAGGGVLPTTSTTPLVRHSSSPARFLNQLATAAGDTVSMGRGSYNPKGGGDSGRGITRLNSQLSFTTQEALSQIAEENEDIEGTSIANGHRKSTHSYASASSFAMGSWEDNNSIMFSVTPSKRSKQISNDIVNGLDDGETQLI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="17676" e_stop="17910"/>
            <exon e_start="18022" e_stop="18195"/>
            <exon e_start="23155" e_stop="23477"/>
            <exon e_start="24130" e_stop="24267"/>
            <exon e_start="24613" e_stop="24678"/>
            <exon e_start="24809" e_stop="24877"/>
            <exon e_start="25208" e_stop="25588"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.928"/>
          <exon-intron don_prob="1.000" acc_prob="0.780" e_score="0.948"/>
          <exon-intron don_prob="1.000" acc_prob="0.937" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.961"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.928">
            <gDNA_exon_boundary e_start="17676" e_stop="17910" e_length="235"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="17911" i_stop="18021" i_length="111"/>
          </intron>
          <exon e_serial="2" e_score="0.948">
            <gDNA_exon_boundary e_start="18022" e_stop="18195" e_length="174"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.780">
            <gDNA_intron_boundary i_start="18196" i_stop="23154" i_length="4959"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="23155" e_stop="23477" e_length="323"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.937">
            <gDNA_intron_boundary i_start="23478" i_stop="24129" i_length="652"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="24130" e_stop="24267" e_length="138"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.997">
            <gDNA_intron_boundary i_start="24268" i_stop="24612" i_length="345"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="24613" e_stop="24678" e_length="66"/>
          </exon>
          <intron i_serial="5" don_prob="0.997" acc_prob="0.984">
            <gDNA_intron_boundary i_start="24679" i_stop="24808" i_length="130"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="24809" e_stop="24877" e_length="69"/>
          </exon>
          <intron i_serial="6" don_prob="0.994" acc_prob="0.991">
            <gDNA_intron_boundary i_start="24878" i_stop="25207" i_length="330"/>
          </intron>
          <exon e_serial="7" e_score="0.961">
            <gDNA_exon_boundary e_start="25208" e_stop="25588" e_length="381"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17676" stop="17910"/>
              <exon start="18022" stop="18195"/>
              <exon start="23155" stop="23381"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420523" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="17716" stop="17910"/>
              <exon start="18022" stop="18195"/>
              <exon start="23155" stop="23274"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E406375" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25299"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368037" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23174" stop="23477"/>
              <exon start="24130" stop="24178"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241002" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23208" stop="23477"/>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24841"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E228508" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24130" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25588"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416758" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24209" stop="24267"/>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25484"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E420524" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24613" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25564"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E617954" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24652" stop="24678"/>
              <exon start="24809" stop="24877"/>
              <exon start="25208" stop="25536"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302680" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="6" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCTCTCTTCCCTCACCCCACCCACCCACCTCTCTCTCTATTAACTTCTCAACCTCCAAATCTTAACAATCCAATTCGAACAAATTATCAAATGTATCCATCATCAACATCTTCTTCATCACAAGGTTCAATGAGCCACACCAGCACCACCGCTGGCGGCGCCGGCGGTGGTCTCACTCGCTACGGTTCAGCTCCGGGATCATTTTTAACTACAGCAGTTGAAGCCGTCGTTAACG : CGAAGGAACAATCGAATTTACAGAGGTCAATTGGTTTCAATGACTTAACAATCGGCGGCGGAAGCGGCGCTGGAGGAGGAGTTTTGCCGACGACTTCAACGACGCCGTTGGTTCGACATAGTAGCTCACCGGCGAGGTTCCTTAATCAACTTGCTACTGCTGCAGGTGATACTG : GATTTTCAGTTTCAATGGGGAGAGGAAGCTATAACCCAAAAGGCGGTGGAGATAGTGGCCGGGGAATAACAAGGCTGAACTCTCAGCTCAGCTTCACAACGCAAGAAGCTCTTTCTCAAATAGCAGAGGAAAATGAGGATATTGAAGGGACCAGTATAGCCAATGGCCACAGAAAGTCAACACATTCTTATGCCAGTGCAAGTAGTTTCGCGATGGGTTCTTGGGAAGATAACAACTCTATAATGTTCTCTGTCACACCTAGCAAACGATCCAAGCAGATTAGCAATGACATTGTCAATGGGCTCGATGACGGGGAAACTCAG : TTTCAGTTTGGCTTGTCTCAGACAGCTCTAGAAATAGCATCTATGGATAGATTGCTGCACATCCCCGAGGATTCTGTTCCTTGCAAAATTCGTGCCAAGCGTGGTTGTGCTACTCATCCTCGCAGCATTGCAGAAAGG : GAGAGAAGAACCAGAATTAGTGGGAAACTAAAGAAGTTACAAGATCTTGTTCCAAACATGGACAAG : CAAACGAGCTATGCTGACATGCTGGATCTAGCAGTGCAGCATATTCGAACCCTTCAAGATCAGGTTCAG : AATCTGAATACAGAACTTGAAAACTGCAAATGTGGATGTAGGAAATCAAGTCAATAACAAAATGGGAGGAAGCACTTTAGCTGAAGATTGACTTAAAAGGATTTTTGTCACCATTATTTTGCTTCTTAGAAACTCAAATTTGTACATATGGAAGTAAATTTCATACTAGTTTTTTAAAGCTAAAAAGTGAACTCTCTTTGTTTTTTTTTCTTTTCCCTTTTCCAGTTAGAAGACTACGTATATGATTGTTTTGGATTATTTCTAGTTTTCTTTTTTCATCTAACATTTACATTTTTAATTTATTTTTGAGTTTATTTTGCTTGAAGATCATAAAAGCTAATTGATGATGTTGTACAACTACTTTCTCTATTTCATTTTTAT</gDNA_template>
            <first_frame> A  L  F  P  H  P  T  H  P  P  L  S  L  L  T  S  Q  P  P  N  L  N  N  P  I  R  T  N  Y  Q  M  Y  P  S  S  T  S  S  S  S  Q  G  S  M  S  H  T  S  T  T  A  G  G  A  G  G  G  L  T  R  Y  G  S  A  P  G  S  F  L  T  T  A  V  E  A  V  V  N   : A  K  E  Q  S  N  L  Q  R  S  I  G  F  N  D  L  T  I  G  G  G  S  G  A  G  G  G  V  L  P  T  T  S  T  T  P  L  V  R  H  S  S  S  P  A  R  F  L  N  Q  L  A  T  A  A  G  D  T   : G  F  S  V  S  M  G  R  G  S  Y  N  P  K  G  G  G  D  S  G  R  G  I  T  R  L  N  S  Q  L  S  F  T  T  Q  E  A  L  S  Q  I  A  E  E  N  E  D  I  E  G  T  S  I  A  N  G  H  R  K  S  T  H  S  Y  A  S  A  S  S  F  A  M  G  S  W  E  D  N  N  S  I  M  F  S  V  T  P  S  K  R  S  K  Q  I  S  N  D  I  V  N  G  L  D  D  G  E  T  Q  :  F  Q  F  G  L  S  Q  T  A  L  E  I  A  S  M  D  R  L  L  H  I  P  E  D  S  V  P  C  K  I  R  A  K  R  G  C  A  T  H  P  R  S  I  A  E  R  :  E  R  R  T  R  I  S  G  K  L  K  K  L  Q  D  L  V  P  N  M  D  K  :  Q  T  S  Y  A  D  M  L  D  L  A  V  Q  H  I  R  T  L  Q  D  Q  V  Q  :  N  L  N  T  E  L  E  N  C  K  C  G  C  R  K  S  S  Q  *  Q  N  G  R  K  H  F  S  *  R  L  T  *  K  D  F  C  H  H  Y  F  A  S  *  K  L  K  F  V  H  M  E  V  N  F  I  L  V  F  *  S  *  K  V  N  S  L  C  F  F  F  F  S  L  F  Q  L  E  D  Y  V  Y  D  C  F  G  L  F  L  V  F  F  F  H  L  T  F  T  F  L  I  Y  F  *  V  Y  F  A  *  R  S  *  K  L  I  D  D  V  V  Q  L  L  S  L  F  H  F  Y </first_frame>
            <second_frame>  L  S  S  L  T  P  P  T  H  L  S  L  Y  *  L  L  N  L  Q  I  L  T  I  Q  F  E  Q  I  I  K  C  I  H  H  Q  H  L  L  H  H  K  V  Q  *  A  T  P  A  P  P  L  A  A  P  A  V  V  S  L  A  T  V  Q  L  R  D  H  F  *  L  Q  Q  L  K  P  S  L  T  :  R  R  N  N  R  I  Y  R  G  Q  L  V  S  M  T  *  Q  S  A  A  E  A  A  L  E  E  E  F  C  R  R  L  Q  R  R  R  W  F  D  I  V  A  H  R  R  G  S  L  I  N  L  L  L  L  Q  V  I  L  :  D  F  Q  F  Q  W  G  E  E  A  I  T  Q  K  A  V  E  I  V  A  G  E  *  Q  G  *  T  L  S  S  A  S  Q  R  K  K  L  F  L  K  *  Q  R  K  M  R  I  L  K  G  P  V  *  P  M  A  T  E  S  Q  H  I  L  M  P  V  Q  V  V  S  R  W  V  L  G  K  I  T  T  L  *  C  S  L  S  H  L  A  N  D  P  S  R  L  A  M  T  L  S  M  G  S  M  T  G  K  L  S :   F  S  L  A  C  L  R  Q  L  *  K  *  H  L  W  I  D  C  C  T  S  P  R  I  L  F  L  A  K  F  V  P  S  V  V  V  L  L  I  L  A  A  L  Q  K  G :   R  E  E  P  E  L  V  G  N  *  R  S  Y  K  I  L  F  Q  T  W  T  S :   K  R  A  M  L  T  C  W  I  *  Q  C  S  I  F  E  P  F  K  I  R  F  R :   I  *  I  Q  N  L  K  T  A  N  V  D  V  G  N  Q  V  N  N  K  M  G  G  S  T  L  A  E  D  *  L  K  R  I  F  V  T  I  I  L  L  L  R  N  S  N  L  Y  I  W  K  *  I  S  Y  *  F  F  K  A  K  K  *  T  L  F  V  F  F  S  F  P  F  S  S  *  K  T  T  Y  M  I  V  L  D  Y  F  *  F  S  F  F  I  *  H  L  H  F  *  F  I  F  E  F  I  L  L  E  D  H  K  S  *  L  M  M  L  Y  N  Y  F  L  Y  F  I  F   </second_frame>
            <third_frame>   S  L  P  S  P  H  P  P  T  S  L  S  I  N  F  S  T  S  K  S  *  Q  S  N  S  N  K  L  S  N  V  S  I  I  N  I  F  F  I  T  R  F  N  E  P  H  Q  H  H  R  W  R  R  R  R  W  S  H  S  L  R  F  S  S  G  I  I  F  N  Y  S  S  *  S  R  R  *  R :   E  G  T  I  E  F  T  E  V  N  W  F  Q  *  L  N  N  R  R  R  K  R  R  W  R  R  S  F  A  D  D  F  N  D  A  V  G  S  T  *  *  L  T  G  E  V  P  *  S  T  C  Y  C  C  R  *  Y  W :   I  F  S  F  N  G  E  R  K  L  *  P  K  R  R  W  R  *  W  P  G  N  N  K  A  E  L  S  A  Q  L  H  N  A  R  S  S  F  S  N  S  R  G  K  *  G  Y  *  R  D  Q  Y  S  Q  W  P  Q  K  V  N  T  F  L  C  Q  C  K  *  F  R  D  G  F  L  G  R  *  Q  L  Y  N  V  L  C  H  T  *  Q  T  I  Q  A  D  *  Q  *  H  C  Q  W  A  R  *  R  G  N  S   : V  S  V  W  L  V  S  D  S  S  R  N  S  I  Y  G  *  I  A  A  H  P  R  G  F  C  S  L  Q  N  S  C  Q  A  W  L  C  Y  S  S  S  Q  H  C  R  K   : G  E  K  N  Q  N  *  W  E  T  K  E  V  T  R  S  C  S  K  H  G  Q   : A  N  E  L  C  *  H  A  G  S  S  S  A  A  Y  S  N  P  S  R  S  G  S   : E  S  E  Y  R  T  *  K  L  Q  M  W  M  *  E  I  K  S  I  T  K  W  E  E  A  L  *  L  K  I  D  L  K  G  F  L  S  P  L  F  C  F  L  E  T  Q  I  C  T  Y  G  S  K  F  H  T  S  F  L  K  L  K  S  E  L  S  L  F  F  F  L  F  P  F  P  V  R  R  L  R  I  *  L  F  W  I  I  S  S  F  L  F  S  S  N  I  Y  I  F  N  L  F  L  S  L  F  C  L  K  I  I  K  A  N  *  *  C  C  T  T  T  F  S  I  S  F  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="17676" stop="17910"/>
                    <exon start="18022" stop="18195"/>
                    <exon start="23155" stop="23477"/>
                    <exon start="24130" stop="24267"/>
                    <exon start="24613" stop="24678"/>
                    <exon start="24809" stop="24877"/>
                    <exon start="25208" stop="25264"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1059</number_coding_nucleotides>
                  <number_encoded_amino_acids>353</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ALFPHPTHPPLSLLTSQPPNLNNPIRTNYQMYPSSTSSSSQGSMSHTSTTAGGAGGGLTRYGSAPGSFLTTAVEAVVNAKEQSNLQRSIGFNDLTIGGGSGAGGGVLPTTSTTPLVRHSSSPARFLNQLATAAGDTGFSVSMGRGSYNPKGGGDSGRGITRLNSQLSFTTQEALSQIAEENEDIEGTSIANGHRKSTHSYASASSFAMGSWEDNNSIMFSVTPSKRSKQISNDIVNGLDDGETQFQFGLSQTALEIASMDRLLHIPEDSVPCKIRAKRGCATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYADMLDLAVQHIRTLQDQVQNLNTELENCKCGCRKSSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="7">
          <exon_coordinates>
            <exon e_start="26190" e_stop="26438"/>
            <exon e_start="26516" e_stop="26548"/>
            <exon e_start="26702" e_stop="27055"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.794" acc_prob="0.941" e_score="0.948"/>
          <exon-intron don_prob="0.000" acc_prob="0.281" e_score="0.515"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="26190" e_stop="26438" e_length="249"/>
          </exon>
          <intron i_serial="1" don_prob="0.794" acc_prob="0.941">
            <gDNA_intron_boundary i_start="26439" i_stop="26515" i_length="77"/>
          </intron>
          <exon e_serial="2" e_score="0.515">
            <gDNA_exon_boundary e_start="26516" e_stop="26548" e_length="33"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.281">
            <gDNA_intron_boundary i_start="26549" i_stop="26701" i_length="153"/>
          </intron>
          <exon e_serial="3" e_score="0.977">
            <gDNA_exon_boundary e_start="26702" e_stop="27055" e_length="354"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26190" stop="26438"/>
              <exon start="26516" stop="26548"/>
              <exon start="26702" stop="27055"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E364772" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="7" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAGCTCTTCCTTCTTCCTTCAAACATTCAAACCTTCATCCATTTCATTTCATTAAACCTTTTCTCTAACTTCTCCTAATACGTGAACTCGGAAAATATATCTTTGTTGAAATCCGAATCTGAGAACTATGACTCTCATTTTTACCCCATAATGTTTGTTTCTTCTCTTGATGAAGTCAGCTTTCAATTTTATTTATGATTGATGAATCAGAAAATTGAAGATAATAAACAGGCATAAGAGAAGACAAAA : GAAGCCAGTTTCTTTGTTGACGAAAACTGAAAT : GAAGTCTTGTACGGAAGATGGCTCAAAATGAAATTGAAGATATGTTAGATCACCTGAGAAGGATCAAGAGTGGAGGTAATCTGGATAGGGTCAAGATCAATCGAATTGAGAAACTTGAAATGGTGTTCAAGTATCATCATGTTCTTTTGCCTGATTCCATCGTCAAACTCAAAAAGAAGGACAAATGGATTGCGAAAATGGTTCAGTGGGTATTGGATGGAATTCCGGATGAATGTAAAACTAACCTTAATTTAAGAAGGTTAGAATTACATTTGTTGGAATTCTTTGAAGGTAAAATCAGTTTAAGTTACAACCATGAGTTGAATGATTCTGATCTGTCGAAATATATGGATT</gDNA_template>
            <first_frame> E  L  F  L  L  P  S  N  I  Q  T  F  I  H  F  I  S  L  N  L  F  S  N  F  S  *  Y  V  N  S  E  N  I  S  L  L  K  S  E  S  E  N  Y  D  S  H  F  Y  P  I  M  F  V  S  S  L  D  E  V  S  F  Q  F  Y  L  *  L  M  N  Q  K  I  E  D  N  K  Q  A  *  E  K  T  K  :  E  A  S  F  F  V  D  E  N  *  N  :  E  V  L  Y  G  R  W  L  K  M  K  L  K  I  C  *  I  T  *  E  G  S  R  V  E  V  I  W  I  G  S  R  S  I  E  L  R  N  L  K  W  C  S  S  I  I  M  F  F  C  L  I  P  S  S  N  S  K  R  R  T  N  G  L  R  K  W  F  S  G  Y  W  M  E  F  R  M  N  V  K  L  T  L  I  *  E  G  *  N  Y  I  C  W  N  S  L  K  V  K  S  V  *  V  T  T  M  S  *  M  I  L  I  C  R  N  I  W  I </first_frame>
            <second_frame>  S  S  S  F  F  L  Q  T  F  K  P  S  S  I  S  F  H  *  T  F  S  L  T  S  P  N  T  *  T  R  K  I  Y  L  C  *  N  P  N  L  R  T  M  T  L  I  F  T  P  *  C  L  F  L  L  L  M  K  S  A  F  N  F  I  Y  D  *  *  I  R  K  L  K  I  I  N  R  H  K  R  R  Q  K :   K  P  V  S  L  L  T  K  T  E  M :   K  S  C  T  E  D  G  S  K  *  N  *  R  Y  V  R  S  P  E  K  D  Q  E  W  R  *  S  G  *  G  Q  D  Q  S  N  *  E  T  *  N  G  V  Q  V  S  S  C  S  F  A  *  F  H  R  Q  T  Q  K  E  G  Q  M  D  C  E  N  G  S  V  G  I  G  W  N  S  G  *  M  *  N  *  P  *  F  K  K  V  R  I  T  F  V  G  I  L  *  R  *  N  Q  F  K  L  Q  P  *  V  E  *  F  *  S  V  E  I  Y  G   </second_frame>
            <third_frame>   A  L  P  S  S  F  K  H  S  N  L  H  P  F  H  F  I  K  P  F  L  *  L  L  L  I  R  E  L  G  K  Y  I  F  V  E  I  R  I  *  E  L  *  L  S  F  L  P  H  N  V  C  F  F  S  *  *  S  Q  L  S  I  L  F  M  I  D  E  S  E  N  *  R  *  *  T  G  I  R  E  D  K   : R  S  Q  F  L  C  *  R  K  L  K   : *  S  L  V  R  K  M  A  Q  N  E  I  E  D  M  L  D  H  L  R  R  I  K  S  G  G  N  L  D  R  V  K  I  N  R  I  E  K  L  E  M  V  F  K  Y  H  H  V  L  L  P  D  S  I  V  K  L  K  K  K  D  K  W  I  A  K  M  V  Q  W  V  L  D  G  I  P  D  E  C  K  T  N  L  N  L  R  R  L  E  L  H  L  L  E  F  F  E  G  K  I  S  L  S  Y  N  H  E  L  N  D  S  D  L  S  K  Y  M  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="7" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26704" stop="27054"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>351</number_coding_nucleotides>
                  <number_encoded_amino_acids>117</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLVRKMAQNEIEDMLDHLRRIKSGGNLDRVKINRIEKLEMVFKYHHVLLPDSIVKLKKKDKWIAKMVQWVLDGIPDECKTNLNLRRLELHLLEFFEGKISLSYNHELNDSDLSKYMD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="8">
          <exon_coordinates>
            <exon e_start="26171" e_stop="26449"/>
            <exon e_start="26702" e_stop="26954"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.281" e_score="0.996"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="26171" e_stop="26449" e_length="279"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.281">
            <gDNA_intron_boundary i_start="26450" i_stop="26701" i_length="252"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="26702" e_stop="26954" e_length="253"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26171" stop="26449"/>
              <exon start="26702" stop="26954"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E331265" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="8" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGAGAGAGAGAGAGAGGGAGCTCTTCCTTCTTCCTTCAAACATTCAAACCTTCATCCATTTCATTTCATTAAACCTTTTCTCTAACTTCTCCTAATACGTGAACTCGGAAAATATATCTTTGTTGAAATCCGAATCTGAGAACTATGACTCTCATTTTTACCCCATAATGTTTGTTTCTTCTCTTGATGAAGTCAGCTTTCAATTTTATTTATGATTGATGAATCAGAAAATTGAAGATAATAAACAGGCATAAGAGAAGACAAAAGTTAACTAACT : GAAGTCTTGTACGGAAGATGGCTCAAAATGAAATTGAAGATATGTTAGATCACCTGAGAAGGATCAAGAGTGGAGGTAATCTGGATAGGGTCAAGATCAATCGAATTGAGAAACTTGAAATGGTGTTCAAGTATCATCATGTTCTTTTGCCTGATTCCATCGTCAAACTCAAAAAGAAGGACAAATGGATTGCGAAAATGGTTCAGTGGGTATTGGATGGAATTCCGGATGAATGTAAAACTAACCTTAATTT</gDNA_template>
            <first_frame> R  E  R  E  R  E  G  A  L  P  S  S  F  K  H  S  N  L  H  P  F  H  F  I  K  P  F  L  *  L  L  L  I  R  E  L  G  K  Y  I  F  V  E  I  R  I  *  E  L  *  L  S  F  L  P  H  N  V  C  F  F  S  *  *  S  Q  L  S  I  L  F  M  I  D  E  S  E  N  *  R  *  *  T  G  I  R  E  D  K  S  *  L  T  :  E  V  L  Y  G  R  W  L  K  M  K  L  K  I  C  *  I  T  *  E  G  S  R  V  E  V  I  W  I  G  S  R  S  I  E  L  R  N  L  K  W  C  S  S  I  I  M  F  F  C  L  I  P  S  S  N  S  K  R  R  T  N  G  L  R  K  W  F  S  G  Y  W  M  E  F  R  M  N  V  K  L  T  L  I  </first_frame>
            <second_frame>  E  R  E  R  E  R  E  L  F  L  L  P  S  N  I  Q  T  F  I  H  F  I  S  L  N  L  F  S  N  F  S  *  Y  V  N  S  E  N  I  S  L  L  K  S  E  S  E  N  Y  D  S  H  F  Y  P  I  M  F  V  S  S  L  D  E  V  S  F  Q  F  Y  L  *  L  M  N  Q  K  I  E  D  N  K  Q  A  *  E  K  T  K  V  N  *  L :   K  S  C  T  E  D  G  S  K  *  N  *  R  Y  V  R  S  P  E  K  D  Q  E  W  R  *  S  G  *  G  Q  D  Q  S  N  *  E  T  *  N  G  V  Q  V  S  S  C  S  F  A  *  F  H  R  Q  T  Q  K  E  G  Q  M  D  C  E  N  G  S  V  G  I  G  W  N  S  G  *  M  *  N  *  P  *  F </second_frame>
            <third_frame>   R  E  R  E  R  G  S  S  S  F  F  L  Q  T  F  K  P  S  S  I  S  F  H  *  T  F  S  L  T  S  P  N  T  *  T  R  K  I  Y  L  C  *  N  P  N  L  R  T  M  T  L  I  F  T  P  *  C  L  F  L  L  L  M  K  S  A  F  N  F  I  Y  D  *  *  I  R  K  L  K  I  I  N  R  H  K  R  R  Q  K  L  T  N   : *  S  L  V  R  K  M  A  Q  N  E  I  E  D  M  L  D  H  L  R  R  I  K  S  G  G  N  L  D  R  V  K  I  N  R  I  E  K  L  E  M  V  F  K  Y  H  H  V  L  L  P  D  S  I  V  K  L  K  K  K  D  K  W  I  A  K  M  V  Q  W  V  L  D  G  I  P  D  E  C  K  T  N  L  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="8" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26704" stop="26952"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLVRKMAQNEIEDMLDHLRRIKSGGNLDRVKINRIEKLEMVFKYHHVLLPDSIVKLKKKDKWIAKMVQWVLDGIPDECKTNLN</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="8" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26759" stop="26953"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EGSRVEVIWIGSRSIELRNLKWCSSIIMFFCLIPSSNSKRRTNGLRKWFSGYWMEFRMNVKLTLI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="27455" PGL_stop="28248"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="27455" e_stop="28248"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="27455" e_stop="28248" e_length="794"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27455" stop="28248"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E539103" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="27456" stop="27832"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280953" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTTGATTATCTTAGTAGAGCTGGAAATGAAGAAAATTTTTCTCGGTGAACTAAAGGCTTCCAAGTTTACTCAATCAAGAACTTTCAAGGACAAGAAATTACCAAAAGGATTTTCTCATCATCTCCATAGTCTGTTGATGTATCTTAGAAACAAAAAGCTTGAGAAATTTCCTAATAATAACTCTCCTCAAAATATTGATATAGCAATAGAGTTCTTGTTGGTTTTCCTTGATGCTGATGTCGGAAATCATGTAATTAATGGTAACTGGTTGAATGAAGTTATGGAAAAGGTTGGAGCTATAGCGGGTGATGTTCTATATGTAATTCAAAAGCTTCTTCCTAGCTCTATAAAAAAAGATGACAATAGCAAAATAAGTCTTTGCTCAATACAGATATGGGAGAAAACTAAAGATCTGAAGGCACAAGTGGAGACGCACTATAAATCCTTAAAATTCACTCCATCGCAATTCCCCACTGTTGGTGGATGGAGCTTTCTGGATTCTCTTATGCGGAAACTGAAAGAGATGTCGAAATCTAAATCTTGTTTAGATTTCCTGATGAAACCTCTTTTGGGGAATTTGGAGAAAGAGCTATCAGCTCTTACATCCATTTTAGAGAAGGATCTGTCATCTTTATCATCCATTTTAAGCGATGTCGCCAAGGTGCACCATGAACATGAAATTCTTCAAGATCTTCACAGGCGTACTATCAATTGGGCATATGAAGCGGAAGTTGCGATTGACTCTATTCTTGCTCAGTATAATGTCTTTTGGCATATTTTTTGCTCACTTCCT</gDNA_template>
            <first_frame> S  *  L  S  *  *  S  W  K  *  R  K  F  F  S  V  N  *  R  L  P  S  L  L  N  Q  E  L  S  R  T  R  N  Y  Q  K  D  F  L  I  I  S  I  V  C  *  C  I  L  E  T  K  S  L  R  N  F  L  I  I  T  L  L  K  I  L  I  *  Q  *  S  S  C  W  F  S  L  M  L  M  S  E  I  M  *  L  M  V  T  G  *  M  K  L  W  K  R  L  E  L  *  R  V  M  F  Y  M  *  F  K  S  F  F  L  A  L  *  K  K  M  T  I  A  K  *  V  F  A  Q  Y  R  Y  G  R  K  L  K  I  *  R  H  K  W  R  R  T  I  N  P  *  N  S  L  H  R  N  S  P  L  L  V  D  G  A  F  W  I  L  L  C  G  N  *  K  R  C  R  N  L  N  L  V  *  I  S  *  *  N  L  F  W  G  I  W  R  K  S  Y  Q  L  L  H  P  F  *  R  R  I  C  H  L  Y  H  P  F  *  A  M  S  P  R  C  T  M  N  M  K  F  F  K  I  F  T  G  V  L  S  I  G  H  M  K  R  K  L  R  L  T  L  F  L  L  S  I  M  S  F  G  I  F  F  A  H  F   </first_frame>
            <second_frame>  L  D  Y  L  S  R  A  G  N  E  E  N  F  S  R  *  T  K  G  F  Q  V  Y  S  I  K  N  F  Q  G  Q  E  I  T  K  R  I  F  S  S  S  P  *  S  V  D  V  S  *  K  Q  K  A  *  E  I  S  *  *  *  L  S  S  K  Y  *  Y  S  N  R  V  L  V  G  F  P  *  C  *  C  R  K  S  C  N  *  W  *  L  V  E  *  S  Y  G  K  G  W  S  Y  S  G  *  C  S  I  C  N  S  K  A  S  S  *  L  Y  K  K  R  *  Q  *  Q  N  K  S  L  L  N  T  D  M  G  E  N  *  R  S  E  G  T  S  G  D  A  L  *  I  L  K  I  H  S  I  A  I  P  H  C  W  W  M  E  L  S  G  F  S  Y  A  E  T  E  R  D  V  E  I  *  I  L  F  R  F  P  D  E  T  S  F  G  E  F  G  E  R  A  I  S  S  Y  I  H  F  R  E  G  S  V  I  F  I  I  H  F  K  R  C  R  Q  G  A  P  *  T  *  N  S  S  R  S  S  Q  A  Y  Y  Q  L  G  I  *  S  G  S  C  D  *  L  Y  S  C  S  V  *  C  L  L  A  Y  F  L  L  T  S  </second_frame>
            <third_frame>   L  I  I  L  V  E  L  E  M  K  K  I  F  L  G  E  L  K  A  S  K  F  T  Q  S  R  T  F  K  D  K  K  L  P  K  G  F  S  H  H  L  H  S  L  L  M  Y  L  R  N  K  K  L  E  K  F  P  N  N  N  S  P  Q  N  I  D  I  A  I  E  F  L  L  V  F  L  D  A  D  V  G  N  H  V  I  N  G  N  W  L  N  E  V  M  E  K  V  G  A  I  A  G  D  V  L  Y  V  I  Q  K  L  L  P  S  S  I  K  K  D  D  N  S  K  I  S  L  C  S  I  Q  I  W  E  K  T  K  D  L  K  A  Q  V  E  T  H  Y  K  S  L  K  F  T  P  S  Q  F  P  T  V  G  G  W  S  F  L  D  S  L  M  R  K  L  K  E  M  S  K  S  K  S  C  L  D  F  L  M  K  P  L  L  G  N  L  E  K  E  L  S  A  L  T  S  I  L  E  K  D  L  S  S  L  S  S  I  L  S  D  V  A  K  V  H  H  E  H  E  I  L  Q  D  L  H  R  R  T  I  N  W  A  Y  E  A  E  V  A  I  D  S  I  L  A  Q  Y  N  V  F  W  H  I  F  C  S  L  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="27457" stop="28248"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>792</number_coding_nucleotides>
                  <number_encoded_amino_acids>264</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIILVELEMKKIFLGELKASKFTQSRTFKDKKLPKGFSHHLHSLLMYLRNKKLEKFPNNNSPQNIDIAIEFLLVFLDADVGNHVINGNWLNEVMEKVGAIAGDVLYVIQKLLPSSIKKDDNSKISLCSIQIWEKTKDLKAQVETHYKSLKFTPSQFPTVGGWSFLDSLMRKLKEMSKSKSCLDFLMKPLLGNLEKELSALTSILEKDLSSLSSILSDVAKVHHEHEILQDLHRRTINWAYEAEVAIDSILAQYNVFWHIFCSLP</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="28361" PGL_stop="29473"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28361" e_stop="29473"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="28361" e_stop="29473" e_length="1113"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28361" stop="28865"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300728" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28863" stop="29473"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371690" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28863" stop="29294"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E280658" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28863" stop="29163"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370462" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28904" stop="29353"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E241579" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACATATCAATCCAGTGACTGATGAGGATATAGTGGGTTTTGGGAATGACATAGAAAAAATGTTTCAGTATCTGATTAGAGGTACAAATGATCTAGACGTTGTCCCAATTGTAGGCATGGGTGGACAAGGGAAAACGACAGTTGCTAGAAAGGTGTACAATAGTGACAACATTGTTTCTCATTTTGATGTTCGAGCATGGTGCATCGTTTCCCAAACATATAACCGGAGAAAGCTATTACAAGACATTTTGAGTCAAGTTACCGGTTCCAAGGACAAGGGGTATGAGGATGATATCCTTGCTGATGAGTTGAGGAAAAGCTTAATGGGCAAGAGATATCTCATTGTCTTGGATGATATGTGGGATTGTATGGCATGGGATGACTTAAGGCTTTCCTTTCCAGATTCCGGAAATAGAAGCAGAATAGTAGTAACAACTCGACTTGAGAAAGTGGGCGAACAAGTCAAGTGCCATACTGATCCTTATTCTCTTCCGTTCCTCACAAAAGAAGAGAGTTGTGAATTGTTGCAGAAAAAAGTGTTTCAAAAGGAAGATTTCCCGCCTGAACTACAAGATGTGAGTCGAGCAGTTGCAGAAAAATGCAAAGGACTGCCCCTAGTGGTTGTCTTGGTAGCTGGAATAATCAAAAAAAGGAAAATGGAAGAATCTTGGTGGAATGAGGTGAAAGATTCTTTATTTGACCACCTTAATCGTGAGTCGGAAGAATATAGTCTTTCAACTATGCAGTTGAGTTACTATAACTTAACCGACTGTTTAAAGCCTTGTCTTCTTTATATGGGGATGTTTCAGGAGGATGCAATAATTCGAGTATCTGAATTGATAAGTCTATGGATTGCGGAAGGATTTGTGCAGAGCATTGAATCTGGGAGATTGTTGATGGAAGAGGCAGCTGAAGGTTACTTGATGGATCTCATTCAGAGTAACGTGGTAATGGTTTCAAATAGAAGGTATAATGGTAAGGTCAAATACTGTCAGGTTCATGACGTAGTGCTTCACTTTTGCTTGGAGAAGAGTCTAGAAGAAAAGTTTATGTTGGCAGTGAAGGGGCATGATAGCCAGTTTCAACCTTTTGAATGGAAGGAAAACCGAGTGA</gDNA_template>
            <first_frame> D  I  S  I  Q  *  L  M  R  I  *  W  V  L  G  M  T  *  K  K  C  F  S  I  *  L  E  V  Q  M  I  *  T  L  S  Q  L  *  A  W  V  D  K  G  K  R  Q  L  L  E  R  C  T  I  V  T  T  L  F  L  I  L  M  F  E  H  G  A  S  F  P  K  H  I  T  G  E  S  Y  Y  K  T  F  *  V  K  L  P  V  P  R  T  R  G  M  R  M  I  S  L  L  M  S  *  G  K  A  *  W  A  R  D  I  S  L  S  W  M  I  C  G  I  V  W  H  G  M  T  *  G  F  P  F  Q  I  P  E  I  E  A  E  *  *  *  Q  L  D  L  R  K  W  A  N  K  S  S  A  I  L  I  L  I  L  F  R  S  S  Q  K  K  R  V  V  N  C  C  R  K  K  C  F  K  R  K  I  S  R  L  N  Y  K  M  *  V  E  Q  L  Q  K  N  A  K  D  C  P  *  W  L  S  W  *  L  E  *  S  K  K  G  K  W  K  N  L  G  G  M  R  *  K  I  L  Y  L  T  T  L  I  V  S  R  K  N  I  V  F  Q  L  C  S  *  V  T  I  T  *  P  T  V  *  S  L  V  F  F  I  W  G  C  F  R  R  M  Q  *  F  E  Y  L  N  *  *  V  Y  G  L  R  K  D  L  C  R  A  L  N  L  G  D  C  *  W  K  R  Q  L  K  V  T  *  W  I  S  F  R  V  T  W  *  W  F  Q  I  E  G  I  M  V  R  S  N  T  V  R  F  M  T  *  C  F  T  F  A  W  R  R  V  *  K  K  S  L  C  W  Q  *  R  G  M  I  A  S  F  N  L  L  N  G  R  K  T  E  * </first_frame>
            <second_frame>  T  Y  Q  S  S  D  *  *  G  Y  S  G  F  W  E  *  H  R  K  N  V  S  V  S  D  *  R  Y  K  *  S  R  R  C  P  N  C  R  H  G  W  T  R  E  N  D  S  C  *  K  G  V  Q  *  *  Q  H  C  F  S  F  *  C  S  S  M  V  H  R  F  P  N  I  *  P  E  K  A  I  T  R  H  F  E  S  S  Y  R  F  Q  G  Q  G  V  *  G  *  Y  P  C  *  *  V  E  E  K  L  N  G  Q  E  I  S  H  C  L  G  *  Y  V  G  L  Y  G  M  G  *  L  K  A  F  L  S  R  F  R  K  *  K  Q  N  S  S  N  N  S  T  *  E  S  G  R  T  S  Q  V  P  Y  *  S  L  F  S  S  V  P  H  K  R  R  E  L  *  I  V  A  E  K  S  V  S  K  G  R  F  P  A  *  T  T  R  C  E  S  S  S  C  R  K  M  Q  R  T  A  P  S  G  C  L  G  S  W  N  N  Q  K  K  E  N  G  R  I  L  V  E  *  G  E  R  F  F  I  *  P  P  *  S  *  V  G  R  I  *  S  F  N  Y  A  V  E  L  L  *  L  N  R  L  F  K  A  L  S  S  L  Y  G  D  V  S  G  G  C  N  N  S  S  I  *  I  D  K  S  M  D  C  G  R  I  C  A  E  H  *  I  W  E  I  V  D  G  R  G  S  *  R  L  L  D  G  S  H  S  E  *  R  G  N  G  F  K  *  K  V  *  W  *  G  Q  I  L  S  G  S  *  R  S  A  S  L  L  L  G  E  E  S  R  R  K  V  Y  V  G  S  E  G  A  *  *  P  V  S  T  F  *  M  E  G  K  P  S   </second_frame>
            <third_frame>   H  I  N  P  V  T  D  E  D  I  V  G  F  G  N  D  I  E  K  M  F  Q  Y  L  I  R  G  T  N  D  L  D  V  V  P  I  V  G  M  G  G  Q  G  K  T  T  V  A  R  K  V  Y  N  S  D  N  I  V  S  H  F  D  V  R  A  W  C  I  V  S  Q  T  Y  N  R  R  K  L  L  Q  D  I  L  S  Q  V  T  G  S  K  D  K  G  Y  E  D  D  I  L  A  D  E  L  R  K  S  L  M  G  K  R  Y  L  I  V  L  D  D  M  W  D  C  M  A  W  D  D  L  R  L  S  F  P  D  S  G  N  R  S  R  I  V  V  T  T  R  L  E  K  V  G  E  Q  V  K  C  H  T  D  P  Y  S  L  P  F  L  T  K  E  E  S  C  E  L  L  Q  K  K  V  F  Q  K  E  D  F  P  P  E  L  Q  D  V  S  R  A  V  A  E  K  C  K  G  L  P  L  V  V  V  L  V  A  G  I  I  K  K  R  K  M  E  E  S  W  W  N  E  V  K  D  S  L  F  D  H  L  N  R  E  S  E  E  Y  S  L  S  T  M  Q  L  S  Y  Y  N  L  T  D  C  L  K  P  C  L  L  Y  M  G  M  F  Q  E  D  A  I  I  R  V  S  E  L  I  S  L  W  I  A  E  G  F  V  Q  S  I  E  S  G  R  L  L  M  E  E  A  A  E  G  Y  L  M  D  L  I  Q  S  N  V  V  M  V  S  N  R  R  Y  N  G  K  V  K  Y  C  Q  V  H  D  V  V  L  H  F  C  L  E  K  S  L  E  E  K  F  M  L  A  V  K  G  H  D  S  Q  F  Q  P  F  E  W  K  E  N  R  V  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28363" stop="29472"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1110</number_coding_nucleotides>
                  <number_encoded_amino_acids>370</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HINPVTDEDIVGFGNDIEKMFQYLIRGTNDLDVVPIVGMGGQGKTTVARKVYNSDNIVSHFDVRAWCIVSQTYNRRKLLQDILSQVTGSKDKGYEDDILADELRKSLMGKRYLIVLDDMWDCMAWDDLRLSFPDSGNRSRIVVTTRLEKVGEQVKCHTDPYSLPFLTKEESCELLQKKVFQKEDFPPELQDVSRAVAEKCKGLPLVVVLVAGIIKKRKMEESWWNEVKDSLFDHLNRESEEYSLSTMQLSYYNLTDCLKPCLLYMGMFQEDAIIRVSELISLWIAEGFVQSIESGRLLMEEAAEGYLMDLIQSNVVMVSNRRYNGKVKYCQVHDVVLHFCLEKSLEEKFMLAVKGHDSQFQPFEWKENRV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="29807" PGL_stop="31148"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="29807" e_stop="30546"/>
            <exon e_start="30625" e_stop="30657"/>
            <exon e_start="30753" e_stop="31024"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29807" e_stop="30546" e_length="740"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30625" e_stop="30657" e_length="33"/>
          </exon>
          <intron i_serial="2" don_prob="0.948" acc_prob="0.979">
            <gDNA_intron_boundary i_start="30658" i_stop="30752" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="0.996">
            <gDNA_exon_boundary e_start="30753" e_stop="31024" e_length="272"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29807" stop="30367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29977" stop="30546"/>
              <exon start="30625" stop="30657"/>
              <exon start="30753" stop="30791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29977" stop="30489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30054" stop="30546"/>
              <exon start="30625" stop="30657"/>
              <exon start="30753" stop="31024"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548165" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30083" stop="30546"/>
              <exon start="30625" stop="30657"/>
              <exon start="30753" stop="30769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30393" stop="30546"/>
              <exon start="30625" stop="30657"/>
              <exon start="30753" stop="31020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300415" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGCGTCTTTTTGGGAGATGGAAAAATTAAGGCATGTTAAGATTTGGGATGCTAAATTTGATTTGGAAGAGGATAATCAGGGATCCTCCGAATTGGAAAATTTGAGGATATTACAGTATGTAAAATTTCCAATTGATGGAAGGGATAGGGTGGATATGTTATCAAGGAGGTGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA : GGATGGTAGGGAATATAATTCGAGATGAAACAT : CAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTCATCAAAGTGTAT</gDNA_template>
            <first_frame> Q  R  L  F  G  R  W  K  N  *  G  M  L  R  F  G  M  L  N  L  I  W  K  R  I  I  R  D  P  P  N  W  K  I  *  G  Y  Y  S  M  *  N  F  Q  L  M  E  G  I  G  W  I  C  Y  Q  G  G  V  Q  I  F  K  N  C  T  S  T  W  N  I  G  A  V  I  I  R  Q  I  Y  F  V  S  H  *  R  I  L  L  S  F  K  I  F  A  *  L  L  R  G  P  T  L  Y  L  G  Y  N  C  L  Q  I  *  T  S  W  Y  *  V  G  L  I  S  K  T  *  V  P  S  L  Q  D  Y  Q  A  W  S  I  S  N  F  V  T  P  M  N  L  F  K  S  E  I  G  A  L  E  V  S  R  S  L  N  L  S  C  *  N  W  *  T  Y  R  S  Q  G  G  M  P  Q  R  N  R  F  P  S  S  K  H  L  L  *  K  G  V  T  T  S  R  R  S  P  L  A  L  L  I  F  Q  H  *  S  R  L  S  *  L  G  A  R  T  N  L  S  R  I  Q  L  W  R  L  R  K  T  L  K  R  M  K  E  T  T  V  L  T  S  L  S  K :   D  G  R  E  Y  N  S  R  *  N  I :   K  I  T  D  R  V  A  G  E  *  Q  G  K  K  L  S  L  K  F  T  N  F  R  S  I  K  N  S  K  V  L  I  V  S  *  I  *  A  H  *  H  D  T  F  A  V  H  S  K  F  *  S  L  L  L  L  N  Y  C  N  L  W  H  L  L  K  N  F  N  H  K  H  F  F  F  N  K  S  N  M  N  D  G  L  L  I  H  Q  S  V  </first_frame>
            <second_frame>  S  V  F  L  G  D  G  K  I  K  A  C  *  D  L  G  C  *  I  *  F  G  R  G  *  S  G  I  L  R  I  G  K  F  E  D  I  T  V  C  K  I  S  N  *  W  K  G  *  G  G  Y  V  I  K  E  V  S  K  S  S  K  T  A  H  Q  L  G  I  S  G  Q  *  *  F  G  R  F  I  L  S  H  I  R  E  S  Y  S  A  S  K  S  S  P  N  C  *  E  V  Q  H  C  I  W  V  T  I  A  F  K  F  K  Q  V  G  T  K  W  G  S  Y  R  K  P  E  F  L  H  C  R  T  T  K  P  G  V  S  P  I  L  *  P  L  *  I  C  S  N  Q  R  L  V  P  W  R  Y  H  V  P  *  T  *  V  V  E  T  G  E  L  T  D  L  K  V  G  C  L  R  G  I  V  S  P  A  R  N  T  C  Y  K  K  V  *  P  P  Q  G  D  P  P  *  L  C  *  Y  S  N  T  E  A  D  *  V  D  *  V  R  E  R  I  S  Q  G  F  S  C  G  D  *  E  R  R  *  R  E  *  R  K  R  P  Y  *  P  H  Y  Q   : R  M  V  G  N  I  I  R  D  E  T   : S  K  S  Q  T  E  W  P  G  N  N  K  A  R  S  S  L  S  S  S  Q  I  F  A  A  L  K  T  Q  R  F  *  *  C  L  R  Y  K  L  I  D  M  I  L  L  L  C  T  Q  N  F  E  V  C  Y  C  *  I  I  V  I  C  G  T  Y  *  K  I  L  I  T  N  I  S  F  L  I  K  V  T  *  M  M  V  C  S  F  I  K  V  Y </second_frame>
            <third_frame>   A  S  F  W  E  M  E  K  L  R  H  V  K  I  W  D  A  K  F  D  L  E  E  D  N  Q  G  S  S  E  L  E  N  L  R  I  L  Q  Y  V  K  F  P  I  D  G  R  D  R  V  D  M  L  S  R  R  C  P  N  L  Q  K  L  H  I  N  L  E  Y  R  G  S  N  N  S  A  D  L  F  C  L  T  L  E  N  L  T  Q  L  Q  N  L  R  L  T  V  E  R  S  N  I  V  S  G  L  Q  L  P  S  N  L  N  K  L  V  L  S  G  A  H  I  E  N  L  S  S  F  I  A  G  L  P  S  L  E  Y  L  Q  F  C  D  P  Y  E  S  V  Q  I  R  D  W  C  L  G  G  I  T  F  P  K  L  K  L  L  K  L  V  N  L  P  I  S  R  W  D  A  S  E  E  S  F  P  Q  L  E  T  L  V  I  K  R  C  N  H  L  K  E  I  P  L  S  F  A  D  I  P  T  L  K  Q  I  K  L  I  R  C  E  N  E  S  L  K  D  S  A  V  E  I  K  K  D  V  E  E  N  E  G  N  D  R  I  D  L  I  I  K  :  G  W  *  G  I  *  F  E  M  K  H  :  Q  N  H  R  Q  S  G  R  G  I  T  R  Q  E  A  L  S  Q  V  H  K  F  S  Q  H  *  K  L  K  G  F  D  S  V  L  D  I  S  S  L  T  *  Y  F  C  C  A  L  K  I  L  K  F  V  I  V  E  L  L  *  F  V  A  P  I  E  K  F  *  S  Q  T  F  L  F  *  *  K  *  H  E  *  W  F  A  H  S  S  K  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29809" stop="30546"/>
                    <exon start="30625" stop="30633"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASFWEMEKLRHVKIWDAKFDLEEDNQGSSELENLRILQYVKFPIDGRDRVDMLSRRCPNLQKLHINLEYRGSNNSADLFCLTLENLTQLQNLRLTVERSNIVSGLQLPSNLNKLVLSGAHIENLSSFIAGLPSLEYLQFCDPYESVQIRDWCLGGITFPKLKLLKLVNLPISRWDASEESFPQLETLVIKRCNHLKEIPLSFADIPTLKQIKLIRCENESLKDSAVEIKKDVEENEGNDRIDLIIKGW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="29807" e_stop="30546"/>
            <exon e_start="30625" e_stop="30657"/>
            <exon e_start="30753" e_stop="30990"/>
            <exon e_start="31134" e_stop="31148"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.948" acc_prob="0.979" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.979"/>
          <exon-only e_score="0.733"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="29807" e_stop="30546" e_length="740"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30625" e_stop="30657" e_length="33"/>
          </exon>
          <intron i_serial="2" don_prob="0.948" acc_prob="0.979">
            <gDNA_intron_boundary i_start="30658" i_stop="30752" i_length="95"/>
          </intron>
          <exon e_serial="3" e_score="0.979">
            <gDNA_exon_boundary e_start="30753" e_stop="30990" e_length="238"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="30991" i_stop="31133" i_length="143"/>
          </intron>
          <exon e_serial="4" e_score="0.733">
            <gDNA_exon_boundary e_start="31134" e_stop="31148" e_length="15"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29807" stop="30367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29977" stop="30546"/>
              <exon start="30625" stop="30657"/>
              <exon start="30753" stop="30791"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E368738" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29977" stop="30489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30083" stop="30546"/>
              <exon start="30625" stop="30657"/>
              <exon start="30753" stop="30769"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E288588" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30212" stop="30546"/>
              <exon start="30625" stop="30657"/>
              <exon start="30753" stop="30990"/>
              <exon start="31134" stop="31148"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251865" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGCGTCTTTTTGGGAGATGGAAAAATTAAGGCATGTTAAGATTTGGGATGCTAAATTTGATTTGGAAGAGGATAATCAGGGATCCTCCGAATTGGAAAATTTGAGGATATTACAGTATGTAAAATTTCCAATTGATGGAAGGGATAGGGTGGATATGTTATCAAGGAGGTGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA : GGATGGTAGGGAATATAATTCGAGATGAAACAT : CAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAAC : TAACAAAATATAAAA</gDNA_template>
            <first_frame> Q  R  L  F  G  R  W  K  N  *  G  M  L  R  F  G  M  L  N  L  I  W  K  R  I  I  R  D  P  P  N  W  K  I  *  G  Y  Y  S  M  *  N  F  Q  L  M  E  G  I  G  W  I  C  Y  Q  G  G  V  Q  I  F  K  N  C  T  S  T  W  N  I  G  A  V  I  I  R  Q  I  Y  F  V  S  H  *  R  I  L  L  S  F  K  I  F  A  *  L  L  R  G  P  T  L  Y  L  G  Y  N  C  L  Q  I  *  T  S  W  Y  *  V  G  L  I  S  K  T  *  V  P  S  L  Q  D  Y  Q  A  W  S  I  S  N  F  V  T  P  M  N  L  F  K  S  E  I  G  A  L  E  V  S  R  S  L  N  L  S  C  *  N  W  *  T  Y  R  S  Q  G  G  M  P  Q  R  N  R  F  P  S  S  K  H  L  L  *  K  G  V  T  T  S  R  R  S  P  L  A  L  L  I  F  Q  H  *  S  R  L  S  *  L  G  A  R  T  N  L  S  R  I  Q  L  W  R  L  R  K  T  L  K  R  M  K  E  T  T  V  L  T  S  L  S  K :   D  G  R  E  Y  N  S  R  *  N  I :   K  I  T  D  R  V  A  G  E  *  Q  G  K  K  L  S  L  K  F  T  N  F  R  S  I  K  N  S  K  V  L  I  V  S  *  I  *  A  H  *  H  D  T  F  A  V  H  S  K  F  *  S  L  L  L  L  N  Y  C  N  L  W  H  L  L  K  N  F  N  H  K  H  F  F  F  N  K  S  N  :  *  Q  N  I  K </first_frame>
            <second_frame>  S  V  F  L  G  D  G  K  I  K  A  C  *  D  L  G  C  *  I  *  F  G  R  G  *  S  G  I  L  R  I  G  K  F  E  D  I  T  V  C  K  I  S  N  *  W  K  G  *  G  G  Y  V  I  K  E  V  S  K  S  S  K  T  A  H  Q  L  G  I  S  G  Q  *  *  F  G  R  F  I  L  S  H  I  R  E  S  Y  S  A  S  K  S  S  P  N  C  *  E  V  Q  H  C  I  W  V  T  I  A  F  K  F  K  Q  V  G  T  K  W  G  S  Y  R  K  P  E  F  L  H  C  R  T  T  K  P  G  V  S  P  I  L  *  P  L  *  I  C  S  N  Q  R  L  V  P  W  R  Y  H  V  P  *  T  *  V  V  E  T  G  E  L  T  D  L  K  V  G  C  L  R  G  I  V  S  P  A  R  N  T  C  Y  K  K  V  *  P  P  Q  G  D  P  P  *  L  C  *  Y  S  N  T  E  A  D  *  V  D  *  V  R  E  R  I  S  Q  G  F  S  C  G  D  *  E  R  R  *  R  E  *  R  K  R  P  Y  *  P  H  Y  Q   : R  M  V  G  N  I  I  R  D  E  T   : S  K  S  Q  T  E  W  P  G  N  N  K  A  R  S  S  L  S  S  S  Q  I  F  A  A  L  K  T  Q  R  F  *  *  C  L  R  Y  K  L  I  D  M  I  L  L  L  C  T  Q  N  F  E  V  C  Y  C  *  I  I  V  I  C  G  T  Y  *  K  I  L  I  T  N  I  S  F  L  I  K  V  T :   N  K  I  *   </second_frame>
            <third_frame>   A  S  F  W  E  M  E  K  L  R  H  V  K  I  W  D  A  K  F  D  L  E  E  D  N  Q  G  S  S  E  L  E  N  L  R  I  L  Q  Y  V  K  F  P  I  D  G  R  D  R  V  D  M  L  S  R  R  C  P  N  L  Q  K  L  H  I  N  L  E  Y  R  G  S  N  N  S  A  D  L  F  C  L  T  L  E  N  L  T  Q  L  Q  N  L  R  L  T  V  E  R  S  N  I  V  S  G  L  Q  L  P  S  N  L  N  K  L  V  L  S  G  A  H  I  E  N  L  S  S  F  I  A  G  L  P  S  L  E  Y  L  Q  F  C  D  P  Y  E  S  V  Q  I  R  D  W  C  L  G  G  I  T  F  P  K  L  K  L  L  K  L  V  N  L  P  I  S  R  W  D  A  S  E  E  S  F  P  Q  L  E  T  L  V  I  K  R  C  N  H  L  K  E  I  P  L  S  F  A  D  I  P  T  L  K  Q  I  K  L  I  R  C  E  N  E  S  L  K  D  S  A  V  E  I  K  K  D  V  E  E  N  E  G  N  D  R  I  D  L  I  I  K  :  G  W  *  G  I  *  F  E  M  K  H  :  Q  N  H  R  Q  S  G  R  G  I  T  R  Q  E  A  L  S  Q  V  H  K  F  S  Q  H  *  K  L  K  G  F  D  S  V  L  D  I  S  S  L  T  *  Y  F  C  C  A  L  K  I  L  K  F  V  I  V  E  L  L  *  F  V  A  P  I  E  K  F  *  S  Q  T  F  L  F  *  *  K  *   : L  T  K  Y  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29809" stop="30546"/>
                    <exon start="30625" stop="30633"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASFWEMEKLRHVKIWDAKFDLEEDNQGSSELENLRILQYVKFPIDGRDRVDMLSRRCPNLQKLHINLEYRGSNNSADLFCLTLENLTQLQNLRLTVERSNIVSGLQLPSNLNKLVLSGAHIENLSSFIAGLPSLEYLQFCDPYESVQIRDWCLGGITFPKLKLLKLVNLPISRWDASEESFPQLETLVIKRCNHLKEIPLSFADIPTLKQIKLIRCENESLKDSAVEIKKDVEENEGNDRIDLIIKGW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="29807" e_stop="30546"/>
            <exon e_start="30625" e_stop="31020"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.998" e_score="0.998"/>
          <exon-only e_score="0.985"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="29807" e_stop="30546" e_length="740"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.998">
            <gDNA_intron_boundary i_start="30547" i_stop="30624" i_length="78"/>
          </intron>
          <exon e_serial="2" e_score="0.985">
            <gDNA_exon_boundary e_start="30625" e_stop="31020" e_length="396"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29807" stop="30367"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E247913" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="29977" stop="30489"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E237622" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30229" stop="30546"/>
              <exon start="30625" stop="31020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E371689" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30663" stop="31020"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E370461" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAGCGTCTTTTTGGGAGATGGAAAAATTAAGGCATGTTAAGATTTGGGATGCTAAATTTGATTTGGAAGAGGATAATCAGGGATCCTCCGAATTGGAAAATTTGAGGATATTACAGTATGTAAAATTTCCAATTGATGGAAGGGATAGGGTGGATATGTTATCAAGGAGGTGTCCAAATCTTCAAAAACTGCACATCAACTTGGAATATCGGGGCAGTAATAATTCGGCAGATTTATTTTGTCTCACATTAGAGAATCTTACTCAGCTTCAAAATCTTCGCCTAACTGTTGAGAGGTCCAACATTGTATCTGGGTTACAATTGCCTTCAAATTTAAACAAGTTGGTACTAAGTGGGGCTCATATCGAAAACCTGAGTTCCTTCATTGCAGGACTACCAAGCCTGGAGTATCTCCAATTTTGTGACCCCTATGAATCTGTTCAAATCAGAGATTGGTGCCTTGGAGGTATCACGTTCCCTAAACTTAAGTTGTTGAAACTGGTGAACTTACCGATCTCAAGGTGGGATGCCTCAGAGGAATCGTTTCCCCAGCTCGAAACACTTGTTATAAAAAGGTGTAACCACCTCAAGGAGATCCCCCTTAGCTTTGCTGATATTCCAACACTGAAGCAGATTAAGTTGATTAGGTGCGAGAACGAATCTCTCAAGGATTCAGCTGTGGAGATTAAGAAAGACGTTGAAGAGAATGAAGGAAACGACCGTATTGACCTCATTATCAAA : GGATGGTAGGGAATATAATTCGAGATGAAACATGTACGTGCCTGTAATCACAACAATGCTATATATTCCTTCTTCTAATTTGACGCTTGCTTTTGCTTAATTGCTCCATGTTGATTTCAAAATTGCAGCAAAATCACAGACAGAGTGGCCGGGGAATAACAAGGCAAGAAGCTCTCTCTCAAGTTCACAAATTTTCGCAGCATTAAAAACTCAAAGGTTTTGATAGTGTCTTAGATATAAGCTCATTGACATGATACTTTTGCTGTGCACTCAAAATTTTGAAGTTTGTTATTGTTGAATTATTGTAATTTGTGGCACCTATTGAAAAATTTTAATCACAAACATTTCTTTTTTAATAAAAGTAACATGAATGATGGTTTGCTCATTCATCAAAGT</gDNA_template>
            <first_frame> Q  R  L  F  G  R  W  K  N  *  G  M  L  R  F  G  M  L  N  L  I  W  K  R  I  I  R  D  P  P  N  W  K  I  *  G  Y  Y  S  M  *  N  F  Q  L  M  E  G  I  G  W  I  C  Y  Q  G  G  V  Q  I  F  K  N  C  T  S  T  W  N  I  G  A  V  I  I  R  Q  I  Y  F  V  S  H  *  R  I  L  L  S  F  K  I  F  A  *  L  L  R  G  P  T  L  Y  L  G  Y  N  C  L  Q  I  *  T  S  W  Y  *  V  G  L  I  S  K  T  *  V  P  S  L  Q  D  Y  Q  A  W  S  I  S  N  F  V  T  P  M  N  L  F  K  S  E  I  G  A  L  E  V  S  R  S  L  N  L  S  C  *  N  W  *  T  Y  R  S  Q  G  G  M  P  Q  R  N  R  F  P  S  S  K  H  L  L  *  K  G  V  T  T  S  R  R  S  P  L  A  L  L  I  F  Q  H  *  S  R  L  S  *  L  G  A  R  T  N  L  S  R  I  Q  L  W  R  L  R  K  T  L  K  R  M  K  E  T  T  V  L  T  S  L  S  K :   D  G  R  E  Y  N  S  R  *  N  M  Y  V  P  V  I  T  T  M  L  Y  I  P  S  S  N  L  T  L  A  F  A  *  L  L  H  V  D  F  K  I  A  A  K  S  Q  T  E  W  P  G  N  N  K  A  R  S  S  L  S  S  S  Q  I  F  A  A  L  K  T  Q  R  F  *  *  C  L  R  Y  K  L  I  D  M  I  L  L  L  C  T  Q  N  F  E  V  C  Y  C  *  I  I  V  I  C  G  T  Y  *  K  I  L  I  T  N  I  S  F  L  I  K  V  T  *  M  M  V  C  S  F  I  K   </first_frame>
            <second_frame>  S  V  F  L  G  D  G  K  I  K  A  C  *  D  L  G  C  *  I  *  F  G  R  G  *  S  G  I  L  R  I  G  K  F  E  D  I  T  V  C  K  I  S  N  *  W  K  G  *  G  G  Y  V  I  K  E  V  S  K  S  S  K  T  A  H  Q  L  G  I  S  G  Q  *  *  F  G  R  F  I  L  S  H  I  R  E  S  Y  S  A  S  K  S  S  P  N  C  *  E  V  Q  H  C  I  W  V  T  I  A  F  K  F  K  Q  V  G  T  K  W  G  S  Y  R  K  P  E  F  L  H  C  R  T  T  K  P  G  V  S  P  I  L  *  P  L  *  I  C  S  N  Q  R  L  V  P  W  R  Y  H  V  P  *  T  *  V  V  E  T  G  E  L  T  D  L  K  V  G  C  L  R  G  I  V  S  P  A  R  N  T  C  Y  K  K  V  *  P  P  Q  G  D  P  P  *  L  C  *  Y  S  N  T  E  A  D  *  V  D  *  V  R  E  R  I  S  Q  G  F  S  C  G  D  *  E  R  R  *  R  E  *  R  K  R  P  Y  *  P  H  Y  Q   : R  M  V  G  N  I  I  R  D  E  T  C  T  C  L  *  S  Q  Q  C  Y  I  F  L  L  L  I  *  R  L  L  L  L  N  C  S  M  L  I  S  K  L  Q  Q  N  H  R  Q  S  G  R  G  I  T  R  Q  E  A  L  S  Q  V  H  K  F  S  Q  H  *  K  L  K  G  F  D  S  V  L  D  I  S  S  L  T  *  Y  F  C  C  A  L  K  I  L  K  F  V  I  V  E  L  L  *  F  V  A  P  I  E  K  F  *  S  Q  T  F  L  F  *  *  K  *  H  E  *  W  F  A  H  S  S  K  </second_frame>
            <third_frame>   A  S  F  W  E  M  E  K  L  R  H  V  K  I  W  D  A  K  F  D  L  E  E  D  N  Q  G  S  S  E  L  E  N  L  R  I  L  Q  Y  V  K  F  P  I  D  G  R  D  R  V  D  M  L  S  R  R  C  P  N  L  Q  K  L  H  I  N  L  E  Y  R  G  S  N  N  S  A  D  L  F  C  L  T  L  E  N  L  T  Q  L  Q  N  L  R  L  T  V  E  R  S  N  I  V  S  G  L  Q  L  P  S  N  L  N  K  L  V  L  S  G  A  H  I  E  N  L  S  S  F  I  A  G  L  P  S  L  E  Y  L  Q  F  C  D  P  Y  E  S  V  Q  I  R  D  W  C  L  G  G  I  T  F  P  K  L  K  L  L  K  L  V  N  L  P  I  S  R  W  D  A  S  E  E  S  F  P  Q  L  E  T  L  V  I  K  R  C  N  H  L  K  E  I  P  L  S  F  A  D  I  P  T  L  K  Q  I  K  L  I  R  C  E  N  E  S  L  K  D  S  A  V  E  I  K  K  D  V  E  E  N  E  G  N  D  R  I  D  L  I  I  K  :  G  W  *  G  I  *  F  E  M  K  H  V  R  A  C  N  H  N  N  A  I  Y  S  F  F  *  F  D  A  C  F  C  L  I  A  P  C  *  F  Q  N  C  S  K  I  T  D  R  V  A  G  E  *  Q  G  K  K  L  S  L  K  F  T  N  F  R  S  I  K  N  S  K  V  L  I  V  S  *  I  *  A  H  *  H  D  T  F  A  V  H  S  K  F  *  S  L  L  L  L  N  Y  C  N  L  W  H  L  L  K  N  F  N  H  K  H  F  F  F  N  K  S  N  M  N  D  G  L  L  I  H  Q  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="29809" stop="30546"/>
                    <exon start="30625" stop="30633"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>744</number_coding_nucleotides>
                  <number_encoded_amino_acids>248</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ASFWEMEKLRHVKIWDAKFDLEEDNQGSSELENLRILQYVKFPIDGRDRVDMLSRRCPNLQKLHINLEYRGSNNSADLFCLTLENLTQLQNLRLTVERSNIVSGLQLPSNLNKLVLSGAHIENLSSFIAGLPSLEYLQFCDPYESVQIRDWCLGGITFPKLKLLKLVNLPISRWDASEESFPQLETLVIKRCNHLKEIPLSFADIPTLKQIKLIRCENESLKDSAVEIKKDVEENEGNDRIDLIIKGW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="34793" PGL_stop="34949"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="34793" e_stop="34949"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="34793" e_stop="34949" e_length="157"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="34793" stop="34949"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E258561" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAACGTGGCAACCATAGCGGGTGATGTTCTATACGTAATTCAAAAGCTTCTTCCTAGATCAATAAGCAAAGACGATGACACTAGCAAGATAAACATTTACTCGATGCAGGTATTGGAGAAAACTAAAGATCTGAAGGCACAAGTAGAGACGTACTAC</gDNA_template>
            <first_frame> K  R  G  N  H  S  G  *  C  S  I  R  N  S  K  A  S  S  *  I  N  K  Q  R  R  *  H  *  Q  D  K  H  L  L  D  A  G  I  G  E  N  *  R  S  E  G  T  S  R  D  V  L  </first_frame>
            <second_frame>  N  V  A  T  I  A  G  D  V  L  Y  V  I  Q  K  L  L  P  R  S  I  S  K  D  D  D  T  S  K  I  N  I  Y  S  M  Q  V  L  E  K  T  K  D  L  K  A  Q  V  E  T  Y  Y </second_frame>
            <third_frame>   T  W  Q  P  *  R  V  M  F  Y  T  *  F  K  S  F  F  L  D  Q  *  A  K  T  M  T  L  A  R  *  T  F  T  R  C  R  Y  W  R  K  L  K  I  *  R  H  K  *  R  R  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0226D21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="36228" PGL_stop="37425"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36228" e_stop="37425"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="36228" e_stop="37425" e_length="1198"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36228" stop="36751"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E245684" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36631" stop="37187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302221" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37049" stop="37425"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E203944" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTAACGTGTCTGCATTGTTAAGTTTATGGTTAGCGGAAGACTTCGTTCAGAACATTAAATCTGCTGAAGATTACTTGATGAATCTCATTAGCAGTAACGTGGTAATGGTTTCAAAGAAAGAATATAATGGCAAGATCAAATACTGTGAGGTTCATGATGTAGTGCTTCACTTTTGCTTGGAGAAGAGTAGAGAAGAAAATTTTATGTTGGTTGCGAAGGGAAATCATAGTCAATTTCAATCTTTTGTTTGGAAGCAAAGTCGAGTGAGCTTCAATTTGATTGAAGAGAATTCCAAGTTTGCATCCAAAACAAGGAAGTGTTCCCATCAACCGTTGAGGTCACTGATAACGAACGGAGCATCTTTTTATATAATGTCCTTAAGTTCTTGGATTCATAATTTGCGACTTCTTAAGGTCTTGGTTTTGAGTTCCTATGAAGTTGACTATGTGAATTCAGCTACACTGAAACCACTTAATTACCTGAAGTACCTCGGAGTAAGGGCAACTACGTTCTATTTTGATCGAGAATCACATCTGCCCCATCTTGAAACTTTAATTGTGAAGAATGATAGATCAGTTATGTTACGAGGGTGTTTTTGGGAAATGGAACAATTAAGGCATGTTGAGATCAATGATGCTGAATTTGATAAGCAGGGGCTCTTTGAAGGATCCTCTAAATTGGAAAATTTGAGGATATTAAAGAACATTGTTGGATTTCCAATTGATAGGGCGGATGTGTTATCAAGGAGGTGTCCTAATCTTCAACAACTTCAAATCGAATTTGGATCTTTTGCAGAACCTCTTTGGCTCACATTGGAGAATCTTACCCAGCTTCAAATACTTGACCTTTCCTTTAGGTTGTTCCACATGCTATCTGGGTTACAATTGCCTTCAAATTTAAAGATGTTGGTACTAAGAGACGCTGATCTAGAAAACCTAACTTCCTTCTTTGCTGGACTACCAAGCCTGGAGTATCTTCAATTAACAAATATGTATTTTCCTCAATCAGAATGGTGCCTTGGAGATATCACGTTTCATAAACTCAAGTTGTTGAAACTGGTGCAGTTAGATATCTCAAGGTGGGATGTCTCGGAGGAATCCTTTCCCCTGCTTGAAACAATCGTTATAAGATGGTGCCATAACCTCGAGGAAATCCCCATTAGCTTTGCAGATGTTCCAACACTGAAACAGATTAAGT</gDNA_template>
            <first_frame> I  N  V  S  A  L  L  S  L  W  L  A  E  D  F  V  Q  N  I  K  S  A  E  D  Y  L  M  N  L  I  S  S  N  V  V  M  V  S  K  K  E  Y  N  G  K  I  K  Y  C  E  V  H  D  V  V  L  H  F  C  L  E  K  S  R  E  E  N  F  M  L  V  A  K  G  N  H  S  Q  F  Q  S  F  V  W  K  Q  S  R  V  S  F  N  L  I  E  E  N  S  K  F  A  S  K  T  R  K  C  S  H  Q  P  L  R  S  L  I  T  N  G  A  S  F  Y  I  M  S  L  S  S  W  I  H  N  L  R  L  L  K  V  L  V  L  S  S  Y  E  V  D  Y  V  N  S  A  T  L  K  P  L  N  Y  L  K  Y  L  G  V  R  A  T  T  F  Y  F  D  R  E  S  H  L  P  H  L  E  T  L  I  V  K  N  D  R  S  V  M  L  R  G  C  F  W  E  M  E  Q  L  R  H  V  E  I  N  D  A  E  F  D  K  Q  G  L  F  E  G  S  S  K  L  E  N  L  R  I  L  K  N  I  V  G  F  P  I  D  R  A  D  V  L  S  R  R  C  P  N  L  Q  Q  L  Q  I  E  F  G  S  F  A  E  P  L  W  L  T  L  E  N  L  T  Q  L  Q  I  L  D  L  S  F  R  L  F  H  M  L  S  G  L  Q  L  P  S  N  L  K  M  L  V  L  R  D  A  D  L  E  N  L  T  S  F  F  A  G  L  P  S  L  E  Y  L  Q  L  T  N  M  Y  F  P  Q  S  E  W  C  L  G  D  I  T  F  H  K  L  K  L  L  K  L  V  Q  L  D  I  S  R  W  D  V  S  E  E  S  F  P  L  L  E  T  I  V  I  R  W  C  H  N  L  E  E  I  P  I  S  F  A  D  V  P  T  L  K  Q  I  K  </first_frame>
            <second_frame>  L  T  C  L  H  C  *  V  Y  G  *  R  K  T  S  F  R  T  L  N  L  L  K  I  T  *  *  I  S  L  A  V  T  W  *  W  F  Q  R  K  N  I  M  A  R  S  N  T  V  R  F  M  M  *  C  F  T  F  A  W  R  R  V  E  K  K  I  L  C  W  L  R  R  E  I  I  V  N  F  N  L  L  F  G  S  K  V  E  *  A  S  I  *  L  K  R  I  P  S  L  H  P  K  Q  G  S  V  P  I  N  R  *  G  H  *  *  R  T  E  H  L  F  I  *  C  P  *  V  L  G  F  I  I  C  D  F  L  R  S  W  F  *  V  P  M  K  L  T  M  *  I  Q  L  H  *  N  H  L  I  T  *  S  T  S  E  *  G  Q  L  R  S  I  L  I  E  N  H  I  C  P  I  L  K  L  *  L  *  R  M  I  D  Q  L  C  Y  E  G  V  F  G  K  W  N  N  *  G  M  L  R  S  M  M  L  N  L  I  S  R  G  S  L  K  D  P  L  N  W  K  I  *  G  Y  *  R  T  L  L  D  F  Q  L  I  G  R  M  C  Y  Q  G  G  V  L  I  F  N  N  F  K  S  N  L  D  L  L  Q  N  L  F  G  S  H  W  R  I  L  P  S  F  K  Y  L  T  F  P  L  G  C  S  T  C  Y  L  G  Y  N  C  L  Q  I  *  R  C  W  Y  *  E  T  L  I  *  K  T  *  L  P  S  L  L  D  Y  Q  A  W  S  I  F  N  *  Q  I  C  I  F  L  N  Q  N  G  A  L  E  I  S  R  F  I  N  S  S  C  *  N  W  C  S  *  I  S  Q  G  G  M  S  R  R  N  P  F  P  C  L  K  Q  S  L  *  D  G  A  I  T  S  R  K  S  P  L  A  L  Q  M  F  Q  H  *  N  R  L  S </second_frame>
            <third_frame>   *  R  V  C  I  V  K  F  M  V  S  G  R  L  R  S  E  H  *  I  C  *  R  L  L  D  E  S  H  *  Q  *  R  G  N  G  F  K  E  R  I  *  W  Q  D  Q  I  L  *  G  S  *  C  S  A  S  L  L  L  G  E  E  *  R  R  K  F  Y  V  G  C  E  G  K  S  *  S  I  S  I  F  C  L  E  A  K  S  S  E  L  Q  F  D  *  R  E  F  Q  V  C  I  Q  N  K  E  V  F  P  S  T  V  E  V  T  D  N  E  R  S  I  F  L  Y  N  V  L  K  F  L  D  S  *  F  A  T  S  *  G  L  G  F  E  F  L  *  S  *  L  C  E  F  S  Y  T  E  T  T  *  L  P  E  V  P  R  S  K  G  N  Y  V  L  F  *  S  R  I  T  S  A  P  S  *  N  F  N  C  E  E  *  *  I  S  Y  V  T  R  V  F  L  G  N  G  T  I  K  A  C  *  D  Q  *  C  *  I  *  *  A  G  A  L  *  R  I  L  *  I  G  K  F  E  D  I  K  E  H  C  W  I  S  N  *  *  G  G  C  V  I  K  E  V  S  *  S  S  T  T  S  N  R  I  W  I  F  C  R  T  S  L  A  H  I  G  E  S  Y  P  A  S  N  T  *  P  F  L  *  V  V  P  H  A  I  W  V  T  I  A  F  K  F  K  D  V  G  T  K  R  R  *  S  R  K  P  N  F  L  L  C  W  T  T  K  P  G  V  S  S  I  N  K  Y  V  F  S  S  I  R  M  V  P  W  R  Y  H  V  S  *  T  Q  V  V  E  T  G  A  V  R  Y  L  K  V  G  C  L  G  G  I  L  S  P  A  *  N  N  R  Y  K  M  V  P  *  P  R  G  N  P  H  *  L  C  R  C  S  N  T  E  T  D  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36228" stop="37424"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1197</number_coding_nucleotides>
                  <number_encoded_amino_acids>399</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>INVSALLSLWLAEDFVQNIKSAEDYLMNLISSNVVMVSKKEYNGKIKYCEVHDVVLHFCLEKSREENFMLVAKGNHSQFQSFVWKQSRVSFNLIEENSKFASKTRKCSHQPLRSLITNGASFYIMSLSSWIHNLRLLKVLVLSSYEVDYVNSATLKPLNYLKYLGVRATTFYFDRESHLPHLETLIVKNDRSVMLRGCFWEMEQLRHVEINDAEFDKQGLFEGSSKLENLRILKNIVGFPIDRADVLSRRCPNLQQLQIEFGSFAEPLWLTLENLTQLQILDLSFRLFHMLSGLQLPSNLKMLVLRDADLENLTSFFAGLPSLEYLQLTNMYFPQSEWCLGDITFHKLKLLKLVQLDISRWDVSEESFPLLETIVIRWCHNLEEIPISFADVPTLKQIK</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="40155" PGL_stop="38746"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40155" e_stop="40019"/>
            <exon e_start="39949" e_stop="39847"/>
            <exon e_start="39038" e_stop="38746"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.810" acc_prob="0.000" e_score="0.956"/>
          <exon-intron don_prob="0.939" acc_prob="0.928" e_score="0.981"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.956">
            <gDNA_exon_boundary e_start="40155" e_stop="40019" e_length="137"/>
          </exon>
          <intron i_serial="1" don_prob="0.810" acc_prob="0.000">
            <gDNA_intron_boundary i_start="40018" i_stop="39950" i_length="69"/>
          </intron>
          <exon e_serial="2" e_score="0.981">
            <gDNA_exon_boundary e_start="39949" e_stop="39847" e_length="103"/>
          </exon>
          <intron i_serial="2" don_prob="0.939" acc_prob="0.928">
            <gDNA_intron_boundary i_start="39846" i_stop="39039" i_length="808"/>
          </intron>
          <exon e_serial="3" e_score="0.976">
            <gDNA_exon_boundary e_start="39038" e_stop="38746" e_length="293"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40155" stop="40019"/>
              <exon start="39949" stop="39847"/>
              <exon start="39038" stop="38746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E450185" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATCAAATATATAGGTTTATCTGAGGCTTGCGCAGCAACAATCAGAAGGGCACACGCGGTGCATCCAATAACAGCTGTTCAGATGGAGTGGTCATTGTGGACCAGAGATCTTGAGGAAGAAATAGTTCCAACTTGCAG : AGAATTAGGAATTGGAATTGTTCCGTATAGTCCTCTCGGACGAGGATTCTTCTCAGCAGGTCCAGAGTTGATTGAGAGCTTGGCCGAGGGAGACTTCCGCAAG : AATATACCAAGGTTCAAGCCTGAAAATTTTGAGCACAACAAGCAAATATACGAGCAAGTCAAGGAAATAGCATCAAGAAAGGGATGCACCACATCACAACTTGCATTGGCTTGGATTCTTCACAAAGGAGATGACATATGCCCCATACCCGGTACCACCAAGATTGACAATCTCAACGAAAATATCGAAGCCATATCTGTAAAGCTGACAATTGATGAAATGATGCAGTTAGAGTCCTGTGCTGCTGAAGATATGGTTAAAGGCGAAAGGCACGCATTCATGTGGGCAACTTG</gDNA_template>
            <first_frame> I  K  Y  I  G  L  S  E  A  C  A  A  T  I  R  R  A  H  A  V  H  P  I  T  A  V  Q  M  E  W  S  L  W  T  R  D  L  E  E  E  I  V  P  T  C  R :   E  L  G  I  G  I  V  P  Y  S  P  L  G  R  G  F  F  S  A  G  P  E  L  I  E  S  L  A  E  G  D  F  R  K  :  N  I  P  R  F  K  P  E  N  F  E  H  N  K  Q  I  Y  E  Q  V  K  E  I  A  S  R  K  G  C  T  T  S  Q  L  A  L  A  W  I  L  H  K  G  D  D  I  C  P  I  P  G  T  T  K  I  D  N  L  N  E  N  I  E  A  I  S  V  K  L  T  I  D  E  M  M  Q  L  E  S  C  A  A  E  D  M  V  K  G  E  R  H  A  F  M  W  A  T   </first_frame>
            <second_frame>  S  N  I  *  V  Y  L  R  L  A  Q  Q  Q  S  E  G  H  T  R  C  I  Q  *  Q  L  F  R  W  S  G  H  C  G  P  E  I  L  R  K  K  *  F  Q  L  A   : E  N  *  E  L  E  L  F  R  I  V  L  S  D  E  D  S  S  Q  Q  V  Q  S  *  L  R  A  W  P  R  E  T  S  A  R :   I  Y  Q  G  S  S  L  K  I  L  S  T  T  S  K  Y  T  S  K  S  R  K  *  H  Q  E  R  D  A  P  H  H  N  L  H  W  L  G  F  F  T  K  E  M  T  Y  A  P  Y  P  V  P  P  R  L  T  I  S  T  K  I  S  K  P  Y  L  *  S  *  Q  L  M  K  *  C  S  *  S  P  V  L  L  K  I  W  L  K  A  K  G  T  H  S  C  G  Q  L  </second_frame>
            <third_frame>   Q  I  Y  R  F  I  *  G  L  R  S  N  N  Q  K  G  T  R  G  A  S  N  N  S  C  S  D  G  V  V  I  V  D  Q  R  S  *  G  R  N  S  S  N  L  Q  :  R  I  R  N  W  N  C  S  V  *  S  S  R  T  R  I  L  L  S  R  S  R  V  D  *  E  L  G  R  G  R  L  P  Q   : E  Y  T  K  V  Q  A  *  K  F  *  A  Q  Q  A  N  I  R  A  S  Q  G  N  S  I  K  K  G  M  H  H  I  T  T  C  I  G  L  D  S  S  Q  R  R  *  H  M  P  H  T  R  Y  H  Q  D  *  Q  S  Q  R  K  Y  R  S  H  I  C  K  A  D  N  *  *  N  D  A  V  R  V  L  C  C  *  R  Y  G  *  R  R  K  A  R  I  H  V  G  N  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40155" stop="40019"/>
                    <exon start="39949" stop="39847"/>
                    <exon start="39038" stop="38748"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>531</number_coding_nucleotides>
                  <number_encoded_amino_acids>177</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IKYIGLSEACAATIRRAHAVHPITAVQMEWSLWTRDLEEEIVPTCRELGIGIVPYSPLGRGFFSAGPELIESLAEGDFRKNIPRFKPENFEHNKQIYEQVKEIASRKGCTTSQLALAWILHKGDDICPIPGTTKIDNLNENIEAISVKLTIDEMMQLESCAAEDMVKGERHAFMWAT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="46830" PGL_stop="42359"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="46829" e_stop="46805"/>
            <exon e_start="46736" e_stop="46683"/>
            <exon e_start="45329" e_stop="44438"/>
            <exon e_start="43036" e_stop="42359"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.437" acc_prob="1.000" e_score="0.800"/>
          <exon-intron don_prob="0.833" acc_prob="0.000" e_score="0.741"/>
          <exon-intron don_prob="1.000" acc_prob="0.956" e_score="0.953"/>
          <exon-only e_score="0.990"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.800">
            <gDNA_exon_boundary e_start="46829" e_stop="46805" e_length="25"/>
          </exon>
          <intron i_serial="1" don_prob="0.437" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46804" i_stop="46737" i_length="68"/>
          </intron>
          <exon e_serial="2" e_score="0.741">
            <gDNA_exon_boundary e_start="46736" e_stop="46683" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.833" acc_prob="0.000">
            <gDNA_intron_boundary i_start="46682" i_stop="45330" i_length="1353"/>
          </intron>
          <exon e_serial="3" e_score="0.953">
            <gDNA_exon_boundary e_start="45329" e_stop="44438" e_length="892"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.956">
            <gDNA_intron_boundary i_start="44437" i_stop="43037" i_length="1401"/>
          </intron>
          <exon e_serial="4" e_score="0.990">
            <gDNA_exon_boundary e_start="43036" e_stop="42359" e_length="678"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46829" stop="46805"/>
              <exon start="46736" stop="46683"/>
              <exon start="45329" stop="44602"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433891" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44611" stop="44438"/>
              <exon start="43036" stop="42391"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E433892" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44605" stop="44438"/>
              <exon start="43036" stop="42474"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E213674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="44452" stop="44438"/>
              <exon start="43036" stop="42359"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374785" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AGAGATTGGGAGAGGGAGGAGAGAG : GGCAAGCGAGATTGGGAGAGAGAGGAGAGCGAGAGAGGGCAAAGAGTGAGAGAT : AATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGTTTTAAAAATCTTTGTCCTACTAAAGTTTTGCCTAAGCATTTGTTAGATTCAAGACTTGCTTCAACATTGTTTTTTGATGGAATTCGTCGATTTAAAGAGACTAAGGGGATTATTGTTAATACTTTTTTCGAGCTTGAATCGTTTTCTCTTCAGGCTCTTTTGGATTCTAAGATGGTTCCAAAAATTTATCCAGTTGGTCCAGTGGTTAGTTTTGAAAAAAGTGGTCATTTTATAAATAATTCATTGGAGATTGAAAGTACTATTAAGTGGTTAGATGATCAACAGGATTCCTCTGTAGTGTTTTTGTGTTTTGGTAGTATGGGAAGTTTTGAAGCAGAACAGGTCAAAGAAATAGCAACTGCACTGGAGCATTCCGGTCACAG : GTTCTTGTGGTCTTTAAGAAAATCTCCACCAAAGGGAAAAGTAGATATACCAACAAGTTACAGCGACTATGAAGAAGTTTTGCCAAAAGGATTCTTGGAGAGAACAAAAGAAAGAGGAAAAATAATAGGATGGGCACCACAAGTAACAATTTTATCTCATCCATCAATAGGAGGATTTGTGTCCCATTGTGGATGGAATTCAATACTAGAAAGTGTACATTTTGGTGTACCAATTGCAACTTGGCCACTCTATGCTGAACAACAAATGAATGCATTTTTATTAGTGAAAGAATTAGGACTTGGTGAAGAGATAAGATTGGACTATGCTGTTGATTTTGAAGGGAAAAATAATCAAGTTGATACAGTAAGTGCTCAAGAAATTGAAAGTGGTTTATTAAAGTTGATGGTAAAAAGTGAAGAAAATGAAGTGAGGAAAAAAATGAAGGAGAAGAGTAGAGTAGCTATGGAGGAAGGTGGATCATCTTATAACTCACTTGGACTTCTAATTAAGGATGTAATCACAAATATTTAATTTTCTTATAGTATATGAAGAAGCAAAACAAGAGAAGATATATGGTATTTGAGGAGATATGTAGTATTATGATTTATGGTCATTTTTAATATTTGTACACTTTCAATATTTATTCAATGCGTTCACTTCAAAAATAATTTTCATAC</gDNA_template>
            <first_frame> R  D  W  E  R  E  E  R   : G  Q  A  R  L  G  E  R  G  E  R  E  R  A  K  S  E  R   : *  L  I  F  I  P  L  A  G  L  G  H  I  V  S  A  I  E  F  A  K  Q  I  L  N  K  D  E  N  F  S  I  S  F  L  I  M  E  L  P  L  D  Y  G  V  K  N  F  I  Q  S  L  T  S  Q  P  R  L  K  F  I  D  I  T  L  D  E  K  T  S  S  Q  F  L  N  N  H  E  T  F  L  Y  D  F  I  D  G  H  K  P  R  V  R  E  Y  V  H  N  I  C  K  T  S  P  C  Y  G  F  V  L  D  M  F  C  T  S  M  I  D  I  A  N  E  F  N  V  P  S  Y  I  Y  F  A  S  N  A  S  F  L  G  L  C  L  H  F  E  T  L  R  N  E  Q  H  S  D  T  S  R  Y  M  N  S  N  E  A  L  S  I  P  C  F  K  N  L  C  P  T  K  V  L  P  K  H  L  L  D  S  R  L  A  S  T  L  F  F  D  G  I  R  R  F  K  E  T  K  G  I  I  V  N  T  F  F  E  L  E  S  F  S  L  Q  A  L  L  D  S  K  M  V  P  K  I  Y  P  V  G  P  V  V  S  F  E  K  S  G  H  F  I  N  N  S  L  E  I  E  S  T  I  K  W  L  D  D  Q  Q  D  S  S  V  V  F  L  C  F  G  S  M  G  S  F  E  A  E  Q  V  K  E  I  A  T  A  L  E  H  S  G  H  R :   F  L  W  S  L  R  K  S  P  P  K  G  K  V  D  I  P  T  S  Y  S  D  Y  E  E  V  L  P  K  G  F  L  E  R  T  K  E  R  G  K  I  I  G  W  A  P  Q  V  T  I  L  S  H  P  S  I  G  G  F  V  S  H  C  G  W  N  S  I  L  E  S  V  H  F  G  V  P  I  A  T  W  P  L  Y  A  E  Q  Q  M  N  A  F  L  L  V  K  E  L  G  L  G  E  E  I  R  L  D  Y  A  V  D  F  E  G  K  N  N  Q  V  D  T  V  S  A  Q  E  I  E  S  G  L  L  K  L  M  V  K  S  E  E  N  E  V  R  K  K  M  K  E  K  S  R  V  A  M  E  E  G  G  S  S  Y  N  S  L  G  L  L  I  K  D  V  I  T  N  I  *  F  S  Y  S  I  *  R  S  K  T  R  E  D  I  W  Y  L  R  R  Y  V  V  L  *  F  M  V  I  F  N  I  C  T  L  S  I  F  I  Q  C  V  H  F  K  N  N  F  H   </first_frame>
            <second_frame>  E  I  G  R  G  R  R  E  :  G  K  R  D  W  E  R  E  E  S  E  R  G  Q  R  V  R  D  :  N  *  F  S  F  L  *  Q  D  *  G  T  L  Y  Q  L  L  N  L  Q  N  K  F  *  I  K  M  K  I  F  P  S  L  F  S  S  W  N  F  L  *  T  M  V  *  K  I  S  F  N  H  S  L  L  N  L  V  *  N  S  S  I  S  P  *  T  K  K  H  H  L  N  S  S  I  T  M  K  H  S  S  M  I  S  S  M  V  T  N  H  A  Y  V  N  M  F  T  T  F  V  K  Q  V  H  V  M  V  L  F  L  T  C  F  V  H  R  *  L  I  *  L  T  N  S  M  S  L  V  T  F  T  S  R  Q  T  L  L  F  L  A  Y  V  F  I  L  R  L  *  E  M  N  N  I  Q  I  R  P  D  T  *  T  L  T  R  H  Y  Q  S  H  V  L  K  I  F  V  L  L  K  F  C  L  S  I  C  *  I  Q  D  L  L  Q  H  C  F  L  M  E  F  V  D  L  K  R  L  R  G  L  L  L  I  L  F  S  S  L  N  R  F  L  F  R  L  F  W  I  L  R  W  F  Q  K  F  I  Q  L  V  Q  W  L  V  L  K  K  V  V  I  L  *  I  I  H  W  R  L  K  V  L  L  S  G  *  M  I  N  R  I  P  L  *  C  F  C  V  L  V  V  W  E  V  L  K  Q  N  R  S  K  K  *  Q  L  H  W  S  I  P  V  T   : G  S  C  G  L  *  E  N  L  H  Q  R  E  K  *  I  Y  Q  Q  V  T  A  T  M  K  K  F  C  Q  K  D  S  W  R  E  Q  K  K  E  E  K  *  *  D  G  H  H  K  *  Q  F  Y  L  I  H  Q  *  E  D  L  C  P  I  V  D  G  I  Q  Y  *  K  V  Y  I  L  V  Y  Q  L  Q  L  G  H  S  M  L  N  N  K  *  M  H  F  Y  *  *  K  N  *  D  L  V  K  R  *  D  W  T  M  L  L  I  L  K  G  K  I  I  K  L  I  Q  *  V  L  K  K  L  K  V  V  Y  *  S  *  W  *  K  V  K  K  M  K  *  G  K  K  *  R  R  R  V  E  *  L  W  R  K  V  D  H  L  I  T  H  L  D  F  *  L  R  M  *  S  Q  I  F  N  F  L  I  V  Y  E  E  A  K  Q  E  K  I  Y  G  I  *  G  D  M  *  Y  Y  D  L  W  S  F  L  I  F  V  H  F  Q  Y  L  F  N  A  F  T  S  K  I  I  F  I  </second_frame>
            <third_frame>   R  L  G  E  G  G  E  R :   A  S  E  I  G  R  E  R  R  A  R  E  G  K  E  *  E  I :   I  N  F  H  S  F  S  R  I  R  A  H  C  I  S  Y  *  I  C  K  T  N  S  K  *  R  *  K  F  F  H  L  F  S  H  H  G  T  S  F  R  L  W  C  E  K  F  H  S  I  T  H  F  S  T  S  F  K  I  H  R  Y  H  P  R  R  K  N  I  I  S  I  P  Q  *  P  *  N  I  P  L  *  F  H  R  W  S  Q  T  T  R  T  *  I  C  S  Q  H  L  *  N  K  S  M  L  W  F  C  S  *  H  V  L  Y  I  D  D  *  Y  S  *  R  I  Q  C  P  *  L  H  L  L  R  V  K  R  F  F  S  W  L  M  S  S  F  *  D  F  K  K  *  T  T  F  R  Y  V  Q  I  H  E  L  *  R  G  I  I  N  P  M  F  *  K  S  L  S  Y  *  S  F  A  *  A  F  V  R  F  K  T  C  F  N  I  V  F  *  W  N  S  S  I  *  R  D  *  G  D  Y  C  *  Y  F  F  R  A  *  I  V  F  S  S  G  S  F  G  F  *  D  G  S  K  N  L  S  S  W  S  S  G  *  F  *  K  K  W  S  F  Y  K  *  F  I  G  D  *  K  Y  Y  *  V  V  R  *  S  T  G  F  L  C  S  V  F  V  F  W  *  Y  G  K  F  *  S  R  T  G  Q  R  N  S  N  C  T  G  A  F  R  S  Q  :  V  L  V  V  F  K  K  I  S  T  K  G  K  S  R  Y  T  N  K  L  Q  R  L  *  R  S  F  A  K  R  I  L  G  E  N  K  R  K  R  K  N  N  R  M  G  T  T  S  N  N  F  I  S  S  I  N  R  R  I  C  V  P  L  W  M  E  F  N  T  R  K  C  T  F  W  C  T  N  C  N  L  A  T  L  C  *  T  T  N  E  C  I  F  I  S  E  R  I  R  T  W  *  R  D  K  I  G  L  C  C  *  F  *  R  E  K  *  S  S  *  Y  S  K  C  S  R  N  *  K  W  F  I  K  V  D  G  K  K  *  R  K  *  S  E  E  K  N  E  G  E  E  *  S  S  Y  G  G  R  W  I  I  L  *  L  T  W  T  S  N  *  G  C  N  H  K  Y  L  I  F  L  *  Y  M  K  K  Q  N  K  R  R  Y  M  V  F  E  E  I  C  S  I  M  I  Y  G  H  F  *  Y  L  Y  T  F  N  I  Y  S  M  R  S  L  Q  K  *  F  S  Y </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45327" stop="44438"/>
                    <exon start="43036" stop="42505"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1419</number_coding_nucleotides>
                  <number_encoded_amino_acids>473</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LIFIPLAGLGHIVSAIEFAKQILNKDENFSISFLIMELPLDYGVKNFIQSLTSQPRLKFIDITLDEKTSSQFLNNHETFLYDFIDGHKPRVREYVHNICKTSPCYGFVLDMFCTSMIDIANEFNVPSYIYFASNASFLGLCLHFETLRNEQHSDTSRYMNSNEALSIPCFKNLCPTKVLPKHLLDSRLASTLFFDGIRRFKETKGIIVNTFFELESFSLQALLDSKMVPKIYPVGPVVSFEKSGHFINNSLEIESTIKWLDDQQDSSVVFLCFGSMGSFEAEQVKEIATALEHSGHRFLWSLRKSPPKGKVDIPTSYSDYEEVLPKGFLERTKERGKIIGWAPQVTILSHPSIGGFVSHCGWNSILESVHFGVPIATWPLYAEQQMNAFLLVKELGLGEEIRLDYAVDFEGKNNQVDTVSAQEIESGLLKLMVKSEENEVRKKMKEKSRVAMEEGGSSYNSLGLLIKDVITNI*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="45343" e_stop="44660"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="45343" e_stop="44660" e_length="684"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45343" stop="44660"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E374786" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45343" stop="44740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E211480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="45343" stop="44814"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202394" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGTCAACATGAAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATATCACCCTAGACGAAAAAACATCATCTCAATTCCTCAATAACCATGAAACATTCCTCTATGATTTCATCGATGGTCACAAACCACGCGTACGTGAATATGTTCACAACATTTGTAAAACAAGTCCATGTTATGGTTTTGTTCTTGACATGTTTTGTACATCGATGATTGATATAGCTAACGAATTCAATGTCCCTAGTTACATTTACTTCGCGTCAAACGCTTCTTTTCTTGGCTTATGTCTTCATTTTGAGACTTTAAGAAATGAACAACATTCAGATACGTCCAGATACATGAACTCTAACGAGGCATTATCAATCCCATGTTTTAAAAATCTTTGTCCTACTAAAGTTTTGCCTAAGCATTTGTTAGATTCAAGACTTGCTTCAACATTGTTTTTTGATGGAATTCGTCGATTTAAAGAGACTAAGGGGATTATTGTTAATACTTTTTTCGAGCTTGAATCGTTTTCTCTTCAGGCTCTTTT</gDNA_template>
            <first_frame> C  Q  H  E  R  I  N  F  H  S  F  S  R  I  R  A  H  C  I  S  Y  *  I  C  K  T  N  S  K  *  R  *  K  F  F  H  L  F  S  H  H  G  T  S  F  R  L  W  C  E  K  F  H  S  I  T  H  F  S  T  S  F  K  I  H  R  Y  H  P  R  R  K  N  I  I  S  I  P  Q  *  P  *  N  I  P  L  *  F  H  R  W  S  Q  T  T  R  T  *  I  C  S  Q  H  L  *  N  K  S  M  L  W  F  C  S  *  H  V  L  Y  I  D  D  *  Y  S  *  R  I  Q  C  P  *  L  H  L  L  R  V  K  R  F  F  S  W  L  M  S  S  F  *  D  F  K  K  *  T  T  F  R  Y  V  Q  I  H  E  L  *  R  G  I  I  N  P  M  F  *  K  S  L  S  Y  *  S  F  A  *  A  F  V  R  F  K  T  C  F  N  I  V  F  *  W  N  S  S  I  *  R  D  *  G  D  Y  C  *  Y  F  F  R  A  *  I  V  F  S  S  G  S  F </first_frame>
            <second_frame>  V  N  M  K  E  L  I  F  I  P  L  A  G  L  G  H  I  V  S  A  I  E  F  A  K  Q  I  L  N  K  D  E  N  F  S  I  S  F  L  I  M  E  L  P  L  D  Y  G  V  K  N  F  I  Q  S  L  T  S  Q  P  R  L  K  F  I  D  I  T  L  D  E  K  T  S  S  Q  F  L  N  N  H  E  T  F  L  Y  D  F  I  D  G  H  K  P  R  V  R  E  Y  V  H  N  I  C  K  T  S  P  C  Y  G  F  V  L  D  M  F  C  T  S  M  I  D  I  A  N  E  F  N  V  P  S  Y  I  Y  F  A  S  N  A  S  F  L  G  L  C  L  H  F  E  T  L  R  N  E  Q  H  S  D  T  S  R  Y  M  N  S  N  E  A  L  S  I  P  C  F  K  N  L  C  P  T  K  V  L  P  K  H  L  L  D  S  R  L  A  S  T  L  F  F  D  G  I  R  R  F  K  E  T  K  G  I  I  V  N  T  F  F  E  L  E  S  F  S  L  Q  A  L   </second_frame>
            <third_frame>   S  T  *  K  N  *  F  S  F  L  *  Q  D  *  G  T  L  Y  Q  L  L  N  L  Q  N  K  F  *  I  K  M  K  I  F  P  S  L  F  S  S  W  N  F  L  *  T  M  V  *  K  I  S  F  N  H  S  L  L  N  L  V  *  N  S  S  I  S  P  *  T  K  K  H  H  L  N  S  S  I  T  M  K  H  S  S  M  I  S  S  M  V  T  N  H  A  Y  V  N  M  F  T  T  F  V  K  Q  V  H  V  M  V  L  F  L  T  C  F  V  H  R  *  L  I  *  L  T  N  S  M  S  L  V  T  F  T  S  R  Q  T  L  L  F  L  A  Y  V  F  I  L  R  L  *  E  M  N  N  I  Q  I  R  P  D  T  *  T  L  T  R  H  Y  Q  S  H  V  L  K  I  F  V  L  L  K  F  C  L  S  I  C  *  I  Q  D  L  L  Q  H  C  F  L  M  E  F  V  D  L  K  R  L  R  G  L  L  L  I  L  F  S  S  L  N  R  F  L  F  R  L  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="45342" stop="44662"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>681</number_coding_nucleotides>
                  <number_encoded_amino_acids>227</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VNMKELIFIPLAGLGHIVSAIEFAKQILNKDENFSISFLIMELPLDYGVKNFIQSLTSQPRLKFIDITLDEKTSSQFLNNHETFLYDFIDGHKPRVREYVHNICKTSPCYGFVLDMFCTSMIDIANEFNVPSYIYFASNASFLGLCLHFETLRNEQHSDTSRYMNSNEALSIPCFKNLCPTKVLPKHLLDSRLASTLFFDGIRRFKETKGIIVNTFFELESFSLQAL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="46830" e_stop="46805"/>
            <exon e_start="46736" e_stop="46683"/>
            <exon e_start="45333" e_stop="45143"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.437" acc_prob="1.000" e_score="0.808"/>
          <exon-intron don_prob="0.833" acc_prob="0.000" e_score="0.741"/>
          <exon-only e_score="0.958"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.808">
            <gDNA_exon_boundary e_start="46830" e_stop="46805" e_length="26"/>
          </exon>
          <intron i_serial="1" don_prob="0.437" acc_prob="1.000">
            <gDNA_intron_boundary i_start="46804" i_stop="46737" i_length="68"/>
          </intron>
          <exon e_serial="2" e_score="0.741">
            <gDNA_exon_boundary e_start="46736" e_stop="46683" e_length="54"/>
          </exon>
          <intron i_serial="2" don_prob="0.833" acc_prob="0.000">
            <gDNA_intron_boundary i_start="46682" i_stop="45334" i_length="1349"/>
          </intron>
          <exon e_serial="3" e_score="0.958">
            <gDNA_exon_boundary e_start="45333" e_stop="45143" e_length="191"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="46830" stop="46805"/>
              <exon start="46736" stop="46683"/>
              <exon start="45333" stop="45143"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404278" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAGAGATTGGGAGAGGGAGGAGAGAG : GGCAAGCGAGATTGGGAGAGAGAGGAGAGCGAGAGAGGGCAAAGAGTGAGAGAT : AAAGAATTAATTTTCATTCCTTTAGCAGGATTAGGGCACATTGTATCAGCTATTGAATTTGCAAAACAAATTCTAAATAAAGATGAAAATTTTTCCATCTCTTTTCTCATCATGGAACTTCCTTTAGACTATGGTGTGAAAAATTTCATTCAATCACTCACTTCTCAACCTCGTTTAAAATTCATCGATAT</gDNA_template>
            <first_frame> E  R  L  G  E  G  G  E  R :   A  S  E  I  G  R  E  R  R  A  R  E  G  K  E  *  E  I :   K  N  *  F  S  F  L  *  Q  D  *  G  T  L  Y  Q  L  L  N  L  Q  N  K  F  *  I  K  M  K  I  F  P  S  L  F  S  S  W  N  F  L  *  T  M  V  *  K  I  S  F  N  H  S  L  L  N  L  V  *  N  S  S  I  </first_frame>
            <second_frame>  R  D  W  E  R  E  E  R   : G  Q  A  R  L  G  E  R  G  E  R  E  R  A  K  S  E  R   : *  R  I  N  F  H  S  F  S  R  I  R  A  H  C  I  S  Y  *  I  C  K  T  N  S  K  *  R  *  K  F  F  H  L  F  S  H  H  G  T  S  F  R  L  W  C  E  K  F  H  S  I  T  H  F  S  T  S  F  K  I  H  R  Y </second_frame>
            <third_frame>   E  I  G  R  G  R  R  E  :  G  K  R  D  W  E  R  E  E  S  E  R  G  Q  R  V  R  D  :  K  E  L  I  F  I  P  L  A  G  L  G  H  I  V  S  A  I  E  F  A  K  Q  I  L  N  K  D  E  N  F  S  I  S  F  L  I  M  E  L  P  L  D  Y  G  V  K  N  F  I  Q  S  L  T  S  Q  P  R  L  K  F  I  D   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="46828" stop="46805"/>
                    <exon start="46736" stop="46683"/>
                    <exon start="45333" stop="45145"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EIGRGRREGKRDWEREESERGQRVRDKELIFIPLAGLGHIVSAIEFAKQILNKDENFSISFLIMELPLDYGVKNFIQSLTSQPRLKFID</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="49854" PGL_stop="54784"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49854" e_stop="50106"/>
            <exon e_start="50254" e_stop="50561"/>
            <exon e_start="51362" e_stop="51600"/>
            <exon e_start="52157" e_stop="52355"/>
            <exon e_start="52551" e_stop="52628"/>
            <exon e_start="52711" e_stop="52894"/>
            <exon e_start="53744" e_stop="53910"/>
            <exon e_start="54086" e_stop="54784"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.240" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.957" e_score="0.997"/>
          <exon-intron don_prob="0.987" acc_prob="0.876" e_score="1.000"/>
          <exon-intron don_prob="0.848" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.081" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.690" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49854" e_stop="50106" e_length="253"/>
          </exon>
          <intron i_serial="1" don_prob="0.240" acc_prob="0.998">
            <gDNA_intron_boundary i_start="50107" i_stop="50253" i_length="147"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="50254" e_stop="50561" e_length="308"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.957">
            <gDNA_intron_boundary i_start="50562" i_stop="51361" i_length="800"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="51362" e_stop="51600" e_length="239"/>
          </exon>
          <intron i_serial="3" don_prob="0.987" acc_prob="0.876">
            <gDNA_intron_boundary i_start="51601" i_stop="52156" i_length="556"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="52157" e_stop="52355" e_length="199"/>
          </exon>
          <intron i_serial="4" don_prob="0.848" acc_prob="0.989">
            <gDNA_intron_boundary i_start="52356" i_stop="52550" i_length="195"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="52551" e_stop="52628" e_length="78"/>
          </exon>
          <intron i_serial="5" don_prob="0.961" acc_prob="0.081">
            <gDNA_intron_boundary i_start="52629" i_stop="52710" i_length="82"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="52711" e_stop="52894" e_length="184"/>
          </exon>
          <intron i_serial="6" don_prob="0.958" acc_prob="0.690">
            <gDNA_intron_boundary i_start="52895" i_stop="53743" i_length="849"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="53744" e_stop="53910" e_length="167"/>
          </exon>
          <intron i_serial="7" don_prob="0.967" acc_prob="0.992">
            <gDNA_intron_boundary i_start="53911" i_stop="54085" i_length="175"/>
          </intron>
          <exon e_serial="8" e_score="0.993">
            <gDNA_exon_boundary e_start="54086" e_stop="54784" e_length="699"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49854" stop="50106"/>
              <exon start="50254" stop="50376"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390527" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49855" stop="50106"/>
              <exon start="50254" stop="50544"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E326008" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49855" stop="50106"/>
              <exon start="50254" stop="50451"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E325989" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50454" stop="50561"/>
              <exon start="51362" stop="51565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51457" stop="51600"/>
              <exon start="52157" stop="52355"/>
              <exon start="52551" stop="52628"/>
              <exon start="52711" stop="52894"/>
              <exon start="53744" stop="53910"/>
              <exon start="54086" stop="54094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52157" stop="52355"/>
              <exon start="52551" stop="52628"/>
              <exon start="52711" stop="52746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52865" stop="52894"/>
              <exon start="53744" stop="53910"/>
              <exon start="54086" stop="54272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274012" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53744" stop="53910"/>
              <exon start="54086" stop="54492"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53817" stop="53910"/>
              <exon start="54086" stop="54784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263116" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CCAACATGTATTTTACATTAACTAACTAGATTTAAAACAAATATCGGACACATATTAAAAAATTAATTTGAAAAAATGATTTTTCAATTTCAGTTTTCATTTTAAAAGTGAAATTCCATTTTTACCCTTTTTCACCTACTATTTAATTTTCATTTTCTTTTAGAATTTTCTAGTTATGGTGTTTTCCTTCTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTG : CTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAGAGTAATAGACGGAACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATGTTCTCGAATTTAATCAG : ATGTCAGAATTGCTAAATCAAAAATCATCAATACATGGAAAGGTTCCATCAGGCTATCTAAATGCCATTTTTGATTTAAGTGGAGCCTGGTTGAATGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCTGTTCCACCGCATTGGGATCCAGCATCCTTATCCAG : ATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACAGTTCCTCCTGCTGAGCTAAAAGCACACTTGGATGACCTCGGAGATTGTCTCTTTTCTGATGAAGCAAGCCCTCTGCCTGAGTGGAAGGCAAAAGAGGGTAAAAAGAAG : GTCCCCGAGGTATTCAATCGCATGTTGCAGTCGCATACCATGCAATTTACTAGCATAACAGAGACATCAAGCAAGGAT : GGTCTCACTATAATTTGGTCAAAAAGAGGTGGTGATGTGTTTGCACAAAGCCACTCGAAGTGGCTTCAGACTGTGGCTGCTTACCCTGATGGCATACTCTTCAAACTTGTACCGATTACTTCGCTCTTAACAGGAATACCAGGAAGCGGTTATCTCAGCCATGCAATAAATTTATATCTACGCT : ATAAGCCTGCTCTAGAGGATTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAG : GTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATGCAGGGCGAAACGAGTGGCGTCTTTGTGGTAACTGGTGCACACCTTGTCAGCAAAGGGAAGTGGCCTAAGACAGTGCTTCACCTGCGTCTACTTTTCACCTATCTTCCTAACTGCACAATACGAAAGACAGAGTGGGCAGCTACACCAGAGGGTACTCATAGGTCAAGTTTCTTAACAAATCTCAGCACAACTTTTACTTTCACTCAGCGGACAAAGACAGATGCTGCACCAAAGCAGCTTCCTGCTGCTCTTAACTCGGGCGTATATCCAGACGGACCTCCAGTACCAGTTCGATCAACAAAGCTGCTCAAGTATGTAGATACGGCTGAGATTGCACGAGGGCCATACGACACTCCTGGACATTGGTTGGTAACTGCTGCTAAGCTTGTTACAGAAGGTGGGAAGATAGGTTTGCATGTGAAGTTTGCTCTA</gDNA_template>
            <first_frame> P  T  C  I  L  H  *  L  T  R  F  K  T  N  I  G  H  I  L  K  N  *  F  E  K  M  I  F  Q  F  Q  F  S  F  *  K  *  N  S  I  F  T  L  F  H  L  L  F  N  F  H  F  L  L  E  F  S  S  Y  G  V  F  L  L  P  S  F  F  L  V  *  Q  D  *  W  S  Q  Q  F  T  D  E  T  S   : A  Q  K  T  N  Q  K  G  S  S  Y  D  V  F  E  L  M  D  E  E  F  E  R  K  R  I  E  V  K  A  M  E  A  L  G  C  G  F  D  F  A  S  D  F  R  L  K  F  V  K  R  C  P  N  G  G  R  L  V  I  L  D  E  S  N  R  R  N  V  V  I  P  G  G  V  T  I  P  D  V  S  E  N  I  R  C  D  K  G  D  H  I  R  F  K  S  D  V  L  E  F  N  Q  :  M  S  E  L  L  N  Q  K  S  S  I  H  G  K  V  P  S  G  Y  L  N  A  I  F  D  L  S  G  A  W  L  N  D  S  A  D  A  K  Y  L  A  F  D  G  Y  F  V  S  L  Y  Y  L  H  L  T  A  S  P  L  V  L  H  D  Q  V  K  K  A  V  P  P  H  W  D  P  A  S  L  S  R :   F  I  Q  A  Y  G  T  H  I  I  V  G  M  G  V  G  G  Q  D  L  L  C  V  K  Q  K  P  S  S  T  V  P  P  A  E  L  K  A  H  L  D  D  L  G  D  C  L  F  S  D  E  A  S  P  L  P  E  W  K  A  K  E  G  K  K  K  :  V  P  E  V  F  N  R  M  L  Q  S  H  T  M  Q  F  T  S  I  T  E  T  S  S  K  D  :  G  L  T  I  I  W  S  K  R  G  G  D  V  F  A  Q  S  H  S  K  W  L  Q  T  V  A  A  Y  P  D  G  I  L  F  K  L  V  P  I  T  S  L  L  T  G  I  P  G  S  G  Y  L  S  H  A  I  N  L  Y  L  R   : Y  K  P  A  L  E  D  L  Q  C  F  L  E  F  Q  V  P  S  Q  W  A  P  L  F  C  E  L  P  L  S  H  Q  R  K  V  A  S  C  P  A  L  Q  F  C  L  F  G  P  K  L  C  V  R  P  T  Q  :  V  T  S  G  Q  K  P  V  I  G  L  R  L  Y  L  E  G  K  K  C  N  H  L  A  I  H  V  Q  H  L  S  S  L  P  N  I  M  A  S  K  S  V  N  N  L  T  L  C  K  P  C  Q  W  R  G  S  D  D  Y  E  S  S  D  Q  F  L  D  P  V  R  W  P  R  Y  S  N  V  C  S  S  V  V  K  H  D  P  S  W  M  Q  G  E  T  S  G  V  F  V  V  T  G  A  H  L  V  S  K  G  K  W  P  K  T  V  L  H  L  R  L  L  F  T  Y  L  P  N  C  T  I  R  K  T  E  W  A  A  T  P  E  G  T  H  R  S  S  F  L  T  N  L  S  T  T  F  T  F  T  Q  R  T  K  T  D  A  A  P  K  Q  L  P  A  A  L  N  S  G  V  Y  P  D  G  P  P  V  P  V  R  S  T  K  L  L  K  Y  V  D  T  A  E  I  A  R  G  P  Y  D  T  P  G  H  W  L  V  T  A  A  K  L  V  T  E  G  G  K  I  G  L  H  V  K  F  A  L </first_frame>
            <second_frame>  Q  H  V  F  Y  I  N  *  L  D  L  K  Q  I  S  D  T  Y  *  K  I  N  L  K  K  *  F  F  N  F  S  F  H  F  K  S  E  I  P  F  L  P  F  F  T  Y  Y  L  I  F  I  F  F  *  N  F  L  V  M  V  F  S  F  F  L  P  S  F  *  Y  N  K  I  N  G  V  N  N  L  Q  T  K  H  L  :  L  K  K  P  T  R  K  A  Q  A  T  T  F  L  S  *  W  M  K  N  S  R  G  R  G  L  K  L  R  L  W  K  L  W  A  V  G  L  I  L  L  A  I  S  G  *  S  S  *  K  D  V  Q  T  G  V  D  W  *  F  W  M  R  V  I  D  G  T  S  S  S  P  A  A  L  Q  F  P  M  Y  L  K  I  S  D  V  I  K  G  T  T  F  V  S  S  L  M  F  S  N  L  I  R :   C  Q  N  C  *  I  K  N  H  Q  Y  M  E  R  F  H  Q  A  I  *  M  P  F  L  I  *  V  E  P  G  *  M  I  Q  Q  M  L  S  T  S  R  L  M  V  I  L  S  R  Y  T  I  C  T  *  Q  H  P  H  *  Y  S  M  T  K  *  R  K  L  F  H  R  I  G  I  Q  H  P  Y  P   : D  L  F  R  L  M  G  H  T  *  L  W  V  W  V  L  E  A  R  T  Y  F  V  L  S  R  N  H  L  Q  Q  F  L  L  L  S  *  K  H  T  W  M  T  S  E  I  V  S  F  L  M  K  Q  A  L  C  L  S  G  R  Q  K  R  V  K  R  R :   S  P  R  Y  S  I  A  C  C  S  R  I  P  C  N  L  L  A  *  Q  R  H  Q  A  R  M :   V  S  L  *  F  G  Q  K  E  V  V  M  C  L  H  K  A  T  R  S  G  F  R  L  W  L  L  T  L  M  A  Y  S  S  N  L  Y  R  L  L  R  S  *  Q  E  Y  Q  E  A  V  I  S  A  M  Q  *  I  Y  I  Y  A  :  I  S  L  L  *  R  I  Y  S  V  S  S  S  F  K  F  L  A  S  G  R  H  C  S  A  S  C  L  L  A  I  K  E  K  W  H  L  A  L  H  C  S  S  V  Y  S  A  Q  S  F  V  *  D  L  P  R :   L  Q  V  V  K  N  P  S  L  V  C  A  C  I  *  K  G  R  N  A  T  T  *  P  Y  M  Y  N  I  F  L  V  Y  Q  T  L  W  H  L  S  L  L  I  T  *  P  Y  A  S  H  V  N  G  E  A  P  M  I  M  N  L  A  T  N  S  *  I  L  S  D  G  R  D  I  P  T  C  A  H  L  *  L  S  M  I  Q  A  G  C  R  A  K  R  V  A  S  L  W  *  L  V  H  T  L  S  A  K  G  S  G  L  R  Q  C  F  T  C  V  Y  F  S  P  I  F  L  T  A  Q  Y  E  R  Q  S  G  Q  L  H  Q  R  V  L  I  G  Q  V  S  *  Q  I  S  A  Q  L  L  L  S  L  S  G  Q  R  Q  M  L  H  Q  S  S  F  L  L  L  L  T  R  A  Y  I  Q  T  D  L  Q  Y  Q  F  D  Q  Q  S  C  S  S  M  *  I  R  L  R  L  H  E  G  H  T  T  L  L  D  I  G  W  *  L  L  L  S  L  L  Q  K  V  G  R  *  V  C  M  *  S  L  L   </second_frame>
            <third_frame>   N  M  Y  F  T  L  T  N  *  I  *  N  K  Y  R  T  H  I  K  K  L  I  *  K  N  D  F  S  I  S  V  F  I  L  K  V  K  F  H  F  Y  P  F  S  P  T  I  *  F  S  F  S  F  R  I  F  *  L  W  C  F  P  S  S  F  L  L  F  S  I  T  R  L  M  E  S  T  I  Y  R  R  N  I  C :   S  K  N  Q  P  E  R  L  K  L  R  R  F  *  A  D  G  *  R  I  R  E  E  E  D  *  S  *  G  Y  G  S  F  G  L  W  V  *  F  C  *  R  F  Q  V  E  V  R  K  K  M  S  K  R  G  *  I  G  N  F  G  *  E  *  *  T  E  R  R  H  P  R  R  R  Y  N  S  R  C  I  *  K  Y  P  M  *  *  R  G  P  H  S  F  Q  V  *  C  S  R  I  *  S   : D  V  R  I  A  K  S  K  I  I  N  T  W  K  G  S  I  R  L  S  K  C  H  F  *  F  K  W  S  L  V  E  *  F  S  R  C  *  V  P  R  V  *  W  L  F  C  L  V  I  L  F  A  P  D  S  I  P  I  S  T  P  *  P  S  E  E  S  C  S  T  A  L  G  S  S  I  L  I  Q  :  I  Y  S  G  L  W  D  T  H  N  C  G  Y  G  C  W  R  P  G  P  T  L  C  *  A  E  T  I  F  N  S  S  S  C  *  A  K  S  T  L  G  *  P  R  R  L  S  L  F  *  *  S  K  P  S  A  *  V  E  G  K  R  G  *  K  E   : G  P  R  G  I  Q  S  H  V  A  V  A  Y  H  A  I  Y  *  H  N  R  D  I  K  Q  G   : W  S  H  Y  N  L  V  K  K  R  W  *  C  V  C  T  K  P  L  E  V  A  S  D  C  G  C  L  P  *  W  H  T  L  Q  T  C  T  D  Y  F  A  L  N  R  N  T  R  K  R  L  S  Q  P  C  N  K  F  I  S  T  L :   *  A  C  S  R  G  F  T  V  F  P  R  V  S  S  S  *  P  V  G  A  I  V  L  R  A  A  S  *  P  S  K  K  S  G  I  L  P  C  I  A  V  L  F  I  R  P  K  A  L  C  E  T  Y  P   : G  Y  K  W  S  K  T  R  H  W  F  A  L  V  F  R  R  E  E  M  Q  P  L  S  H  T  C  T  T  S  F  *  F  T  K  H  Y  G  I  *  V  C  *  *  P  N  L  M  Q  A  M  S  M  A  R  L  R  *  L  *  I  *  R  P  I  L  R  S  C  Q  M  A  E  I  F  Q  R  V  L  I  C  S  *  A  *  S  K  L  D  A  G  R  N  E  W  R  L  C  G  N  W  C  T  P  C  Q  Q  R  E  V  A  *  D  S  A  S  P  A  S  T  F  H  L  S  S  *  L  H  N  T  K  D  R  V  G  S  Y  T  R  G  Y  S  *  V  K  F  L  N  K  S  Q  H  N  F  Y  F  H  S  A  D  K  D  R  C  C  T  K  A  A  S  C  C  S  *  L  G  R  I  S  R  R  T  S  S  T  S  S  I  N  K  A  A  Q  V  C  R  Y  G  *  D  C  T  R  A  I  R  H  S  W  T  L  V  G  N  C  C  *  A  C  Y  R  R  W  E  D  R  F  A  C  E  V  C  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50076" stop="50106"/>
                    <exon start="50254" stop="50561"/>
                    <exon start="51362" stop="51600"/>
                    <exon start="52157" stop="52355"/>
                    <exon start="52551" stop="52628"/>
                    <exon start="52711" stop="52894"/>
                    <exon start="53744" stop="53910"/>
                    <exon start="54086" stop="54784"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1905</number_coding_nucleotides>
                  <number_encoded_amino_acids>635</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WSQQFTDETSAQKTNQKGSSYDVFELMDEEFERKRIEVKAMEALGCGFDFASDFRLKFVKRCPNGGRLVILDESNRRNVVIPGGVTIPDVSENIRCDKGDHIRFKSDVLEFNQMSELLNQKSSIHGKVPSGYLNAIFDLSGAWLNDSADAKYLAFDGYFVSLYYLHLTASPLVLHDQVKKAVPPHWDPASLSRFIQAYGTHIIVGMGVGGQDLLCVKQKPSSTVPPAELKAHLDDLGDCLFSDEASPLPEWKAKEGKKKVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFAQSHSKWLQTVAAYPDGILFKLVPITSLLTGIPGSGYLSHAINLYLRYKPALEDLQCFLEFQVPSQWAPLFCELPLSHQRKVASCPALQFCLFGPKLCVRPTQVTSGQKPVIGLRLYLEGKKCNHLAIHVQHLSSLPNIMASKSVNNLTLCKPCQWRGSDDYESSDQFLDPVRWPRYSNVCSSVVKHDPSWMQGETSGVFVVTGAHLVSKGKWPKTVLHLRLLFTYLPNCTIRKTEWAATPEGTHRSSFLTNLSTTFTFTQRTKTDAAPKQLPAALNSGVYPDGPPVPVRSTKLLKYVDTAEIARGPYDTPGHWLVTAAKLVTEGGKIGLHVKFAL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="50043" e_stop="50561"/>
            <exon e_start="51362" e_stop="51600"/>
            <exon e_start="52157" e_stop="52355"/>
            <exon e_start="52551" e_stop="52628"/>
            <exon e_start="52711" e_stop="52894"/>
            <exon e_start="53744" e_stop="53910"/>
            <exon e_start="54086" e_stop="54784"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.957" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.876" e_score="1.000"/>
          <exon-intron don_prob="0.848" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.961" acc_prob="0.081" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.690" e_score="1.000"/>
          <exon-intron don_prob="0.967" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="50043" e_stop="50561" e_length="519"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.957">
            <gDNA_intron_boundary i_start="50562" i_stop="51361" i_length="800"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="51362" e_stop="51600" e_length="239"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.876">
            <gDNA_intron_boundary i_start="51601" i_stop="52156" i_length="556"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="52157" e_stop="52355" e_length="199"/>
          </exon>
          <intron i_serial="3" don_prob="0.848" acc_prob="0.989">
            <gDNA_intron_boundary i_start="52356" i_stop="52550" i_length="195"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="52551" e_stop="52628" e_length="78"/>
          </exon>
          <intron i_serial="4" don_prob="0.961" acc_prob="0.081">
            <gDNA_intron_boundary i_start="52629" i_stop="52710" i_length="82"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="52711" e_stop="52894" e_length="184"/>
          </exon>
          <intron i_serial="5" don_prob="0.958" acc_prob="0.690">
            <gDNA_intron_boundary i_start="52895" i_stop="53743" i_length="849"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="53744" e_stop="53910" e_length="167"/>
          </exon>
          <intron i_serial="6" don_prob="0.967" acc_prob="0.992">
            <gDNA_intron_boundary i_start="53911" i_stop="54085" i_length="175"/>
          </intron>
          <exon e_serial="7" e_score="0.993">
            <gDNA_exon_boundary e_start="54086" e_stop="54784" e_length="699"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50043" stop="50561"/>
              <exon start="51362" stop="51600"/>
              <exon start="52157" stop="52260"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E705754" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50103" stop="50561"/>
              <exon start="51362" stop="51600"/>
              <exon start="52157" stop="52269"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602938" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="50454" stop="50561"/>
              <exon start="51362" stop="51565"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E212650" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="51457" stop="51600"/>
              <exon start="52157" stop="52355"/>
              <exon start="52551" stop="52628"/>
              <exon start="52711" stop="52894"/>
              <exon start="53744" stop="53910"/>
              <exon start="54086" stop="54094"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704796" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52157" stop="52355"/>
              <exon start="52551" stop="52628"/>
              <exon start="52711" stop="52746"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E399631" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="52865" stop="52894"/>
              <exon start="53744" stop="53910"/>
              <exon start="54086" stop="54272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E274012" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53744" stop="53910"/>
              <exon start="54086" stop="54492"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E276485" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53817" stop="53910"/>
              <exon start="54086" stop="54784"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E263116" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTCCTTCCTTCTTTTTAGTATAACAAGATTAATGGAGTCAACAATTTACAGACGAAACATCTGGTCAAAAGTCAAACCTTTTCTCTTTCACTTTCCTTCTCCCGTCATCTACTTCTGACCAAAACCCCTCTACCTATCCCCAAACCTTATACCCCTCATTTTCTCAAATGGGTATTTCTTAAAATTTCCATTTTTTGTACTTTTTTTCAGCTCAAAAAACCAACCAGAAAGGCTCAAGCTACGACGTTTTTGAGCTGATGGATGAAGAATTCGAGAGGAAGAGGATTGAAGTTAAGGCTATGGAAGCTTTGGGCTGTGGGTTTGATTTTGCTAGCGATTTCAGGTTGAAGTTCGTAAAAAGATGTCCAAACGGGGGTAGATTGGTAATTTTGGATGAGAGTAATAGACGGAACGTCGTCATCCCCGGCGGCGTTACAATTCCCGATGTATCTGAAAATATCCGATGTGATAAAGGGGACCACATTCGTTTCAAGTCTGATGTTCTCGAATTTAATCAG : ATGTCAGAATTGCTAAATCAAAAATCATCAATACATGGAAAGGTTCCATCAGGCTATCTAAATGCCATTTTTGATTTAAGTGGAGCCTGGTTGAATGATTCAGCAGATGCTAAGTACCTCGCGTTTGATGGTTATTTTGTCTCGTTATACTATTTGCACCTGACAGCATCCCCATTAGTACTCCATGACCAAGTGAAGAAAGCTGTTCCACCGCATTGGGATCCAGCATCCTTATCCAG : ATTTATTCAGGCTTATGGGACACACATAATTGTGGGTATGGGTGTTGGAGGCCAGGACCTACTTTGTGTTAAGCAGAAACCATCTTCAACAGTTCCTCCTGCTGAGCTAAAAGCACACTTGGATGACCTCGGAGATTGTCTCTTTTCTGATGAAGCAAGCCCTCTGCCTGAGTGGAAGGCAAAAGAGGGTAAAAAGAAG : GTCCCCGAGGTATTCAATCGCATGTTGCAGTCGCATACCATGCAATTTACTAGCATAACAGAGACATCAAGCAAGGAT : GGTCTCACTATAATTTGGTCAAAAAGAGGTGGTGATGTGTTTGCACAAAGCCACTCGAAGTGGCTTCAGACTGTGGCTGCTTACCCTGATGGCATACTCTTCAAACTTGTACCGATTACTTCGCTCTTAACAGGAATACCAGGAAGCGGTTATCTCAGCCATGCAATAAATTTATATCTACGCT : ATAAGCCTGCTCTAGAGGATTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAG : GTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATGCAGGGCGAAACGAGTGGCGTCTTTGTGGTAACTGGTGCACACCTTGTCAGCAAAGGGAAGTGGCCTAAGACAGTGCTTCACCTGCGTCTACTTTTCACCTATCTTCCTAACTGCACAATACGAAAGACAGAGTGGGCAGCTACACCAGAGGGTACTCATAGGTCAAGTTTCTTAACAAATCTCAGCACAACTTTTACTTTCACTCAGCGGACAAAGACAGATGCTGCACCAAAGCAGCTTCCTGCTGCTCTTAACTCGGGCGTATATCCAGACGGACCTCCAGTACCAGTTCGATCAACAAAGCTGCTCAAGTATGTAGATACGGCTGAGATTGCACGAGGGCCATACGACACTCCTGGACATTGGTTGGTAACTGCTGCTAAGCTTGTTACAGAAGGTGGGAAGATAGGTTTGCATGTGAAGTTTGCTCTA</gDNA_template>
            <first_frame> L  P  S  F  F  L  V  *  Q  D  *  W  S  Q  Q  F  T  D  E  T  S  G  Q  K  S  N  L  F  S  F  T  F  L  L  P  S  S  T  S  D  Q  N  P  S  T  Y  P  Q  T  L  Y  P  S  F  S  Q  M  G  I  S  *  N  F  H  F  L  Y  F  F  S  A  Q  K  T  N  Q  K  G  S  S  Y  D  V  F  E  L  M  D  E  E  F  E  R  K  R  I  E  V  K  A  M  E  A  L  G  C  G  F  D  F  A  S  D  F  R  L  K  F  V  K  R  C  P  N  G  G  R  L  V  I  L  D  E  S  N  R  R  N  V  V  I  P  G  G  V  T  I  P  D  V  S  E  N  I  R  C  D  K  G  D  H  I  R  F  K  S  D  V  L  E  F  N  Q  :  M  S  E  L  L  N  Q  K  S  S  I  H  G  K  V  P  S  G  Y  L  N  A  I  F  D  L  S  G  A  W  L  N  D  S  A  D  A  K  Y  L  A  F  D  G  Y  F  V  S  L  Y  Y  L  H  L  T  A  S  P  L  V  L  H  D  Q  V  K  K  A  V  P  P  H  W  D  P  A  S  L  S  R :   F  I  Q  A  Y  G  T  H  I  I  V  G  M  G  V  G  G  Q  D  L  L  C  V  K  Q  K  P  S  S  T  V  P  P  A  E  L  K  A  H  L  D  D  L  G  D  C  L  F  S  D  E  A  S  P  L  P  E  W  K  A  K  E  G  K  K  K  :  V  P  E  V  F  N  R  M  L  Q  S  H  T  M  Q  F  T  S  I  T  E  T  S  S  K  D  :  G  L  T  I  I  W  S  K  R  G  G  D  V  F  A  Q  S  H  S  K  W  L  Q  T  V  A  A  Y  P  D  G  I  L  F  K  L  V  P  I  T  S  L  L  T  G  I  P  G  S  G  Y  L  S  H  A  I  N  L  Y  L  R   : Y  K  P  A  L  E  D  L  Q  C  F  L  E  F  Q  V  P  S  Q  W  A  P  L  F  C  E  L  P  L  S  H  Q  R  K  V  A  S  C  P  A  L  Q  F  C  L  F  G  P  K  L  C  V  R  P  T  Q  :  V  T  S  G  Q  K  P  V  I  G  L  R  L  Y  L  E  G  K  K  C  N  H  L  A  I  H  V  Q  H  L  S  S  L  P  N  I  M  A  S  K  S  V  N  N  L  T  L  C  K  P  C  Q  W  R  G  S  D  D  Y  E  S  S  D  Q  F  L  D  P  V  R  W  P  R  Y  S  N  V  C  S  S  V  V  K  H  D  P  S  W  M  Q  G  E  T  S  G  V  F  V  V  T  G  A  H  L  V  S  K  G  K  W  P  K  T  V  L  H  L  R  L  L  F  T  Y  L  P  N  C  T  I  R  K  T  E  W  A  A  T  P  E  G  T  H  R  S  S  F  L  T  N  L  S  T  T  F  T  F  T  Q  R  T  K  T  D  A  A  P  K  Q  L  P  A  A  L  N  S  G  V  Y  P  D  G  P  P  V  P  V  R  S  T  K  L  L  K  Y  V  D  T  A  E  I  A  R  G  P  Y  D  T  P  G  H  W  L  V  T  A  A  K  L  V  T  E  G  G  K  I  G  L  H  V  K  F  A  L </first_frame>
            <second_frame>  F  L  P  S  F  *  Y  N  K  I  N  G  V  N  N  L  Q  T  K  H  L  V  K  S  Q  T  F  S  L  S  L  S  F  S  R  H  L  L  L  T  K  T  P  L  P  I  P  K  P  Y  T  P  H  F  L  K  W  V  F  L  K  I  S  I  F  C  T  F  F  Q  L  K  K  P  T  R  K  A  Q  A  T  T  F  L  S  *  W  M  K  N  S  R  G  R  G  L  K  L  R  L  W  K  L  W  A  V  G  L  I  L  L  A  I  S  G  *  S  S  *  K  D  V  Q  T  G  V  D  W  *  F  W  M  R  V  I  D  G  T  S  S  S  P  A  A  L  Q  F  P  M  Y  L  K  I  S  D  V  I  K  G  T  T  F  V  S  S  L  M  F  S  N  L  I  R :   C  Q  N  C  *  I  K  N  H  Q  Y  M  E  R  F  H  Q  A  I  *  M  P  F  L  I  *  V  E  P  G  *  M  I  Q  Q  M  L  S  T  S  R  L  M  V  I  L  S  R  Y  T  I  C  T  *  Q  H  P  H  *  Y  S  M  T  K  *  R  K  L  F  H  R  I  G  I  Q  H  P  Y  P   : D  L  F  R  L  M  G  H  T  *  L  W  V  W  V  L  E  A  R  T  Y  F  V  L  S  R  N  H  L  Q  Q  F  L  L  L  S  *  K  H  T  W  M  T  S  E  I  V  S  F  L  M  K  Q  A  L  C  L  S  G  R  Q  K  R  V  K  R  R :   S  P  R  Y  S  I  A  C  C  S  R  I  P  C  N  L  L  A  *  Q  R  H  Q  A  R  M :   V  S  L  *  F  G  Q  K  E  V  V  M  C  L  H  K  A  T  R  S  G  F  R  L  W  L  L  T  L  M  A  Y  S  S  N  L  Y  R  L  L  R  S  *  Q  E  Y  Q  E  A  V  I  S  A  M  Q  *  I  Y  I  Y  A  :  I  S  L  L  *  R  I  Y  S  V  S  S  S  F  K  F  L  A  S  G  R  H  C  S  A  S  C  L  L  A  I  K  E  K  W  H  L  A  L  H  C  S  S  V  Y  S  A  Q  S  F  V  *  D  L  P  R :   L  Q  V  V  K  N  P  S  L  V  C  A  C  I  *  K  G  R  N  A  T  T  *  P  Y  M  Y  N  I  F  L  V  Y  Q  T  L  W  H  L  S  L  L  I  T  *  P  Y  A  S  H  V  N  G  E  A  P  M  I  M  N  L  A  T  N  S  *  I  L  S  D  G  R  D  I  P  T  C  A  H  L  *  L  S  M  I  Q  A  G  C  R  A  K  R  V  A  S  L  W  *  L  V  H  T  L  S  A  K  G  S  G  L  R  Q  C  F  T  C  V  Y  F  S  P  I  F  L  T  A  Q  Y  E  R  Q  S  G  Q  L  H  Q  R  V  L  I  G  Q  V  S  *  Q  I  S  A  Q  L  L  L  S  L  S  G  Q  R  Q  M  L  H  Q  S  S  F  L  L  L  L  T  R  A  Y  I  Q  T  D  L  Q  Y  Q  F  D  Q  Q  S  C  S  S  M  *  I  R  L  R  L  H  E  G  H  T  T  L  L  D  I  G  W  *  L  L  L  S  L  L  Q  K  V  G  R  *  V  C  M  *  S  L  L   </second_frame>
            <third_frame>   S  F  L  L  F  S  I  T  R  L  M  E  S  T  I  Y  R  R  N  I  W  S  K  V  K  P  F  L  F  H  F  P  S  P  V  I  Y  F  *  P  K  P  L  Y  L  S  P  N  L  I  P  L  I  F  S  N  G  Y  F  L  K  F  P  F  F  V  L  F  F  S  S  K  N  Q  P  E  R  L  K  L  R  R  F  *  A  D  G  *  R  I  R  E  E  E  D  *  S  *  G  Y  G  S  F  G  L  W  V  *  F  C  *  R  F  Q  V  E  V  R  K  K  M  S  K  R  G  *  I  G  N  F  G  *  E  *  *  T  E  R  R  H  P  R  R  R  Y  N  S  R  C  I  *  K  Y  P  M  *  *  R  G  P  H  S  F  Q  V  *  C  S  R  I  *  S   : D  V  R  I  A  K  S  K  I  I  N  T  W  K  G  S  I  R  L  S  K  C  H  F  *  F  K  W  S  L  V  E  *  F  S  R  C  *  V  P  R  V  *  W  L  F  C  L  V  I  L  F  A  P  D  S  I  P  I  S  T  P  *  P  S  E  E  S  C  S  T  A  L  G  S  S  I  L  I  Q  :  I  Y  S  G  L  W  D  T  H  N  C  G  Y  G  C  W  R  P  G  P  T  L  C  *  A  E  T  I  F  N  S  S  S  C  *  A  K  S  T  L  G  *  P  R  R  L  S  L  F  *  *  S  K  P  S  A  *  V  E  G  K  R  G  *  K  E   : G  P  R  G  I  Q  S  H  V  A  V  A  Y  H  A  I  Y  *  H  N  R  D  I  K  Q  G   : W  S  H  Y  N  L  V  K  K  R  W  *  C  V  C  T  K  P  L  E  V  A  S  D  C  G  C  L  P  *  W  H  T  L  Q  T  C  T  D  Y  F  A  L  N  R  N  T  R  K  R  L  S  Q  P  C  N  K  F  I  S  T  L :   *  A  C  S  R  G  F  T  V  F  P  R  V  S  S  S  *  P  V  G  A  I  V  L  R  A  A  S  *  P  S  K  K  S  G  I  L  P  C  I  A  V  L  F  I  R  P  K  A  L  C  E  T  Y  P   : G  Y  K  W  S  K  T  R  H  W  F  A  L  V  F  R  R  E  E  M  Q  P  L  S  H  T  C  T  T  S  F  *  F  T  K  H  Y  G  I  *  V  C  *  *  P  N  L  M  Q  A  M  S  M  A  R  L  R  *  L  *  I  *  R  P  I  L  R  S  C  Q  M  A  E  I  F  Q  R  V  L  I  C  S  *  A  *  S  K  L  D  A  G  R  N  E  W  R  L  C  G  N  W  C  T  P  C  Q  Q  R  E  V  A  *  D  S  A  S  P  A  S  T  F  H  L  S  S  *  L  H  N  T  K  D  R  V  G  S  Y  T  R  G  Y  S  *  V  K  F  L  N  K  S  Q  H  N  F  Y  F  H  S  A  D  K  D  R  C  C  T  K  A  A  S  C  C  S  *  L  G  R  I  S  R  R  T  S  S  T  S  S  I  N  K  A  A  Q  V  C  R  Y  G  *  D  C  T  R  A  I  R  H  S  W  T  L  V  G  N  C  C  *  A  C  Y  R  R  W  E  D  R  F  A  C  E  V  C  S  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="50226" stop="50561"/>
                    <exon start="51362" stop="51600"/>
                    <exon start="52157" stop="52355"/>
                    <exon start="52551" stop="52628"/>
                    <exon start="52711" stop="52894"/>
                    <exon start="53744" stop="53910"/>
                    <exon start="54086" stop="54784"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1902</number_coding_nucleotides>
                  <number_encoded_amino_acids>634</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NFHFLYFFSAQKTNQKGSSYDVFELMDEEFERKRIEVKAMEALGCGFDFASDFRLKFVKRCPNGGRLVILDESNRRNVVIPGGVTIPDVSENIRCDKGDHIRFKSDVLEFNQMSELLNQKSSIHGKVPSGYLNAIFDLSGAWLNDSADAKYLAFDGYFVSLYYLHLTASPLVLHDQVKKAVPPHWDPASLSRFIQAYGTHIIVGMGVGGQDLLCVKQKPSSTVPPAELKAHLDDLGDCLFSDEASPLPEWKAKEGKKKVPEVFNRMLQSHTMQFTSITETSSKDGLTIIWSKRGGDVFAQSHSKWLQTVAAYPDGILFKLVPITSLLTGIPGSGYLSHAINLYLRYKPALEDLQCFLEFQVPSQWAPLFCELPLSHQRKVASCPALQFCLFGPKLCVRPTQVTSGQKPVIGLRLYLEGKKCNHLAIHVQHLSSLPNIMASKSVNNLTLCKPCQWRGSDDYESSDQFLDPVRWPRYSNVCSSVVKHDPSWMQGETSGVFVVTGAHLVSKGKWPKTVLHLRLLFTYLPNCTIRKTEWAATPEGTHRSSFLTNLSTTFTFTQRTKTDAAPKQLPAALNSGVYPDGPPVPVRSTKLLKYVDTAEIARGPYDTPGHWLVTAAKLVTEGGKIGLHVKFAL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="53763" e_stop="54352"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="53763" e_stop="54352" e_length="590"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="53763" stop="54352"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302377" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="3" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTACAGTGTTTCCTCGAGTTTCAAGTTCCTAGCCAGTGGGCGCCATTGTTCTGCGAGCTGCCTCTTAGCCATCAAAGAAAAGTGGCATCTTGCCCTGCATTGCAGTTCTGTTTATTCGGCCCAAAGCTTTGTGTGAGACCTACCCAGGTACTTCTTTGGTGTTTCTTTCTTAGCAAAAGGACCGCTGCTTTATTACAAAAATAATAAAAGTTGAAACTATATGTGCTTCATTCCAATGAGGTATTGGTCTTGCCATGGCTTCTAATGCACTAGTATTGATGTTCATGATGACACCTAATCGATATGTTCTTCTTATATGTAGGTTACAAGTGGTCAAAAACCCGTCATTGGTTTGCGCTTGTATTTAGAAGGGAAGAAATGCAACCACTTAGCCATACATGTACAACATCTTTCTAGTTTACCAAACATTATGGCATCTAAGTCTGTTAATAACCTAACCTTATGCAAGCCATGTCAATGGCGAGGCTCCGATGATTATGAATCTAGCGACCAATTCTTAGATCCTGTCAGATGGCCGAGATATTCCAACGTGTGCTCATCTGTAGTTAAGCATGATCCAAGCTGGATG</gDNA_template>
            <first_frame> F  T  V  F  P  R  V  S  S  S  *  P  V  G  A  I  V  L  R  A  A  S  *  P  S  K  K  S  G  I  L  P  C  I  A  V  L  F  I  R  P  K  A  L  C  E  T  Y  P  G  T  S  L  V  F  L  S  *  Q  K  D  R  C  F  I  T  K  I  I  K  V  E  T  I  C  A  S  F  Q  *  G  I  G  L  A  M  A  S  N  A  L  V  L  M  F  M  M  T  P  N  R  Y  V  L  L  I  C  R  L  Q  V  V  K  N  P  S  L  V  C  A  C  I  *  K  G  R  N  A  T  T  *  P  Y  M  Y  N  I  F  L  V  Y  Q  T  L  W  H  L  S  L  L  I  T  *  P  Y  A  S  H  V  N  G  E  A  P  M  I  M  N  L  A  T  N  S  *  I  L  S  D  G  R  D  I  P  T  C  A  H  L  *  L  S  M  I  Q  A  G   </first_frame>
            <second_frame>  L  Q  C  F  L  E  F  Q  V  P  S  Q  W  A  P  L  F  C  E  L  P  L  S  H  Q  R  K  V  A  S  C  P  A  L  Q  F  C  L  F  G  P  K  L  C  V  R  P  T  Q  V  L  L  W  C  F  F  L  S  K  R  T  A  A  L  L  Q  K  *  *  K  L  K  L  Y  V  L  H  S  N  E  V  L  V  L  P  W  L  L  M  H  *  Y  *  C  S  *  *  H  L  I  D  M  F  F  L  Y  V  G  Y  K  W  S  K  T  R  H  W  F  A  L  V  F  R  R  E  E  M  Q  P  L  S  H  T  C  T  T  S  F  *  F  T  K  H  Y  G  I  *  V  C  *  *  P  N  L  M  Q  A  M  S  M  A  R  L  R  *  L  *  I  *  R  P  I  L  R  S  C  Q  M  A  E  I  F  Q  R  V  L  I  C  S  *  A  *  S  K  L  D  </second_frame>
            <third_frame>   Y  S  V  S  S  S  F  K  F  L  A  S  G  R  H  C  S  A  S  C  L  L  A  I  K  E  K  W  H  L  A  L  H  C  S  S  V  Y  S  A  Q  S  F  V  *  D  L  P  R  Y  F  F  G  V  S  F  L  A  K  G  P  L  L  Y  Y  K  N  N  K  S  *  N  Y  M  C  F  I  P  M  R  Y  W  S  C  H  G  F  *  C  T  S  I  D  V  H  D  D  T  *  S  I  C  S  S  Y  M  *  V  T  S  G  Q  K  P  V  I  G  L  R  L  Y  L  E  G  K  K  C  N  H  L  A  I  H  V  Q  H  L  S  S  L  P  N  I  M  A  S  K  S  V  N  N  L  T  L  C  K  P  C  Q  W  R  G  S  D  D  Y  E  S  S  D  Q  F  L  D  P  V  R  W  P  R  Y  S  N  V  C  S  S  V  V  K  H  D  P  S  W  M </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="54086" stop="54352"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>267</number_coding_nucleotides>
                  <number_encoded_amino_acids>89</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VTSGQKPVIGLRLYLEGKKCNHLAIHVQHLSSLPNIMASKSVNNLTLCKPCQWRGSDDYESSDQFLDPVRWPRYSNVCSSVVKHDPSWM</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="3" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="53764" stop="53967"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQCFLEFQVPSQWAPLFCELPLSHQRKVASCPALQFCLFGPKLCVRPTQVLLWCFFLSKRTAALLQK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="54799" PGL_stop="55025"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="54799" e_stop="55025"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.912">
            <gDNA_exon_boundary e_start="54799" e_stop="55025" e_length="227"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="54799" stop="55025"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E398116" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CGAATCATAATTTCTTGTGTGTACATATTCTGAGGTAGCCTTGTCCTTTTCTTTATATCATTTTTATTCAGTTACATTTAGTCTTATCAGCTTCCAATATCTTGATGATATATCATATTGTTTAATTTATCCAAGAAATGGCCAACAGGGGAGGAAAATGTTATAGTATTGTACAGAAGAATTTAGTGGAAGAATCGATTTATTTTTTGTTCTTTCCACCTTTTCAA</gDNA_template>
            <first_frame> R  I  I  I  S  C  V  Y  I  F  *  G  S  L  V  L  F  F  I  S  F  L  F  S  Y  I  *  S  Y  Q  L  P  I  S  *  *  Y  I  I  L  F  N  L  S  K  K  W  P  T  G  E  E  N  V  I  V  L  Y  R  R  I  *  W  K  N  R  F  I  F  C  S  F  H  L  F   </first_frame>
            <second_frame>  E  S  *  F  L  V  C  T  Y  S  E  V  A  L  S  F  S  L  Y  H  F  Y  S  V  T  F  S  L  I  S  F  Q  Y  L  D  D  I  S  Y  C  L  I  Y  P  R  N  G  Q  Q  G  R  K  M  L  *  Y  C  T  E  E  F  S  G  R  I  D  L  F  F  V  L  S  T  F  S  </second_frame>
            <third_frame>   N  H  N  F  L  C  V  H  I  L  R  *  P  C  P  F  L  Y  I  I  F  I  Q  L  H  L  V  L  S  A  S  N  I  L  M  I  Y  H  I  V  *  F  I  Q  E  M  A  N  R  G  G  K  C  Y  S  I  V  Q  K  N  L  V  E  E  S  I  Y  F  L  F  F  P  P  F  Q </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0226D21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="68265" PGL_stop="67902"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68265" e_stop="67902"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.912">
            <gDNA_exon_boundary e_start="68265" e_stop="67902" e_length="364"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68265" stop="67902"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E569056" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACTGTCGATTATAGCAAGAAACCTTTAACAATCGACCCCATTTTCAGACGTCAGCTCGGTCAGAGGCTTGGCGCTGTTGGTTTCTACCTAGAACGCAAGTTTGGTTCTCCTCAAGATGTCGAAGGATGTTTGGTTGGTAATGAGATTTTCATCGTGCAATCGCGACCTCAACCCCAGTGAGATATCGAGTTTGCACTGTACTTGTTCACAATAGCGTTTGTAAAATTCAGCATCTCTCTGAGGTGTACACAGTTGATTAAATAAGCTTATACTAGTCCTATACGAGTAAAGGAGCAGCTTGATGCATTAAGTTACCGTTATGTGCAAGCTCTGGAGAAGAGTCGGACCACGAGAGTCTACTGTA</gDNA_template>
            <first_frame> T  V  D  Y  S  K  K  P  L  T  I  D  P  I  F  R  R  Q  L  G  Q  R  L  G  A  V  G  F  Y  L  E  R  K  F  G  S  P  Q  D  V  E  G  C  L  V  G  N  E  I  F  I  V  Q  S  R  P  Q  P  Q  *  D  I  E  F  A  L  Y  L  F  T  I  A  F  V  K  F  S  I  S  L  R  C  T  Q  L  I  K  *  A  Y  T  S  P  I  R  V  K  E  Q  L  D  A  L  S  Y  R  Y  V  Q  A  L  E  K  S  R  T  T  R  V  Y  C  </first_frame>
            <second_frame>  L  S  I  I  A  R  N  L  *  Q  S  T  P  F  S  D  V  S  S  V  R  G  L  A  L  L  V  S  T  *  N  A  S  L  V  L  L  K  M  S  K  D  V  W  L  V  M  R  F  S  S  C  N  R  D  L  N  P  S  E  I  S  S  L  H  C  T  C  S  Q  *  R  L  *  N  S  A  S  L  *  G  V  H  S  *  L  N  K  L  I  L  V  L  Y  E  *  R  S  S  L  M  H  *  V  T  V  M  C  K  L  W  R  R  V  G  P  R  E  S  T  V </second_frame>
            <third_frame>   C  R  L  *  Q  E  T  F  N  N  R  P  H  F  Q  T  S  A  R  S  E  A  W  R  C  W  F  L  P  R  T  Q  V  W  F  S  S  R  C  R  R  M  F  G  W  *  *  D  F  H  R  A  I  A  T  S  T  P  V  R  Y  R  V  C  T  V  L  V  H  N  S  V  C  K  I  Q  H  L  S  E  V  Y  T  V  D  *  I  S  L  Y  *  S  Y  T  S  K  G  A  A  *  C  I  K  L  P  L  C  A  S  S  G  E  E  S  D  H  E  S  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0226D21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="67938" PGL_stop="68546"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="67938" e_stop="68546"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.941"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.941">
            <gDNA_exon_boundary e_start="67938" e_stop="68546" e_length="609"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="67938" stop="68546"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E589313" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTGCACATAACGGTAACTTAATGCATCAAGCTGCTCCTTTACTCGTATAGGACTAGTATAAGCTTATTTAATCAACTGTGTACACCTCAGAGAGATGCTGAATTTTACAAACGCTATTGTGAACAAGTACAGTGCAAACTCGATATCTCACTGGGGTTGAGGTCGCGATTGCACGATGAAAATCTCATTACCAACCAAACATCCTTCGACATCTTGAGGAGAACCAAACTTGCGTTCTAGGTAGAAACCAACAGCGCCAAGCCTCTGACCGAGCTGACGTCTGAAAATGGGGTCGATTGTTAAAGGTTTCTTGCTATAATCGACAGTCAAGTGAATAACTTCTCCGTCAGCAGGGGAATTGCCACCTACAACCATCTCCTCGCTAAAGTTGGCGAATGCTAGTGTGCGAACTGTGTCATCAAATTTACCACTAGATAGACGCCACGGTGTACCCCTTGTTCCTGAAGCGAGTGTTTCACCGAGTCCAGGTGCAATTTCAGCCTCAATGAAGTTATGATTGTTGTCCGTGGGGCTCAGTGTGTGGAGGACAAAAGACAAATCTGGTGAAAGCATTTCTTGCACTAGCACGGCCATCGTAGCATCTTTCT</gDNA_template>
            <first_frame> L  A  H  N  G  N  L  M  H  Q  A  A  P  L  L  V  *  D  *  Y  K  L  I  *  S  T  V  Y  T  S  E  R  C  *  I  L  Q  T  L  L  *  T  S  T  V  Q  T  R  Y  L  T  G  V  E  V  A  I  A  R  *  K  S  H  Y  Q  P  N  I  L  R  H  L  E  E  N  Q  T  C  V  L  G  R  N  Q  Q  R  Q  A  S  D  R  A  D  V  *  K  W  G  R  L  L  K  V  S  C  Y  N  R  Q  S  S  E  *  L  L  R  Q  Q  G  N  C  H  L  Q  P  S  P  R  *  S  W  R  M  L  V  C  E  L  C  H  Q  I  Y  H  *  I  D  A  T  V  Y  P  L  F  L  K  R  V  F  H  R  V  Q  V  Q  F  Q  P  Q  *  S  Y  D  C  C  P  W  G  S  V  C  G  G  Q  K  T  N  L  V  K  A  F  L  A  L  A  R  P  S  *  H  L  S </first_frame>
            <second_frame>  L  H  I  T  V  T  *  C  I  K  L  L  L  Y  S  Y  R  T  S  I  S  L  F  N  Q  L  C  T  P  Q  R  D  A  E  F  Y  K  R  Y  C  E  Q  V  Q  C  K  L  D  I  S  L  G  L  R  S  R  L  H  D  E  N  L  I  T  N  Q  T  S  F  D  I  L  R  R  T  K  L  A  F  *  V  E  T  N  S  A  K  P  L  T  E  L  T  S  E  N  G  V  D  C  *  R  F  L  A  I  I  D  S  Q  V  N  N  F  S  V  S  R  G  I  A  T  Y  N  H  L  L  A  K  V  G  E  C  *  C  A  N  C  V  I  K  F  T  T  R  *  T  P  R  C  T  P  C  S  *  S  E  C  F  T  E  S  R  C  N  F  S  L  N  E  V  M  I  V  V  R  G  A  Q  C  V  E  D  K  R  Q  I  W  *  K  H  F  L  H  *  H  G  H  R  S  I  F   </second_frame>
            <third_frame>   C  T  *  R  *  L  N  A  S  S  C  S  F  T  R  I  G  L  V  *  A  Y  L  I  N  C  V  H  L  R  E  M  L  N  F  T  N  A  I  V  N  K  Y  S  A  N  S  I  S  H  W  G  *  G  R  D  C  T  M  K  I  S  L  P  T  K  H  P  S  T  S  *  G  E  P  N  L  R  S  R  *  K  P  T  A  P  S  L  *  P  S  *  R  L  K  M  G  S  I  V  K  G  F  L  L  *  S  T  V  K  *  I  T  S  P  S  A  G  E  L  P  P  T  T  I  S  S  L  K  L  A  N  A  S  V  R  T  V  S  S  N  L  P  L  D  R  R  H  G  V  P  L  V  P  E  A  S  V  S  P  S  P  G  A  I  S  A  S  M  K  L  *  L  L  S  V  G  L  S  V  W  R  T  K  D  K  S  G  E  S  I  S  C  T  S  T  A  I  V  A  S  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="67960" stop="68178"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>216</number_coding_nucleotides>
                  <number_encoded_amino_acids>72</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>CIKLLLYSYRTSISLFNQLCTPQRDAEFYKRYCEQVQCKLDISLGLRSRLHDENLITNQTSFDILRRTKLAF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="69447" PGL_stop="68397"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="69447" e_stop="69347"/>
            <exon e_start="68990" e_stop="68535"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.083" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="69447" e_stop="69347" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.083" acc_prob="0.999">
            <gDNA_intron_boundary i_start="69346" i_stop="68991" i_length="356"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="68990" e_stop="68535" e_length="456"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69447" stop="69347"/>
              <exon start="68990" stop="68535"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E251427" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69442" stop="69347"/>
              <exon start="68990" stop="68600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E551438" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69442" stop="69347"/>
              <exon start="68990" stop="68600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E688587" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TAGAGGTGTTATTCCTCTTGTTGATGCAGATATACAAACCTCTGGTGCAAAAGCTGCTTCTTGTGCTCAATTAGCTTCACTGGCCACTTCTTCTACTAAAG : TTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGCCTCGTTGTATACTAGAAGAGCAGTACTGAGCCGCAGAGCTGCTGGTGTGTCCCAGAAAGATGCTA</gDNA_template>
            <first_frame> *  R  C  Y  S  S  C  *  C  R  Y  T  N  L  W  C  K  S  C  F  L  C  S  I  S  F  T  G  H  F  F  Y  *  S :   L  *  *  P  R  C  T  S  I  I  *  S  S  C  W  S  S  Y  S  I  W  F  H  G  N  G  I  G  N  E  Q  V  N  G  D  L  H  I  A  C  *  A  D  R  N  S  *  N  *  W  R  *  T  *  *  T  L  *  G  S  P  E  V  N  I  F  V  I  A  W  T  R  C  H  R  K  L  G  R  N  I  S  R  *  C  T  F  N  S  A  F  K  C  *  C  R  G  L  G  G  D  V  S  S  R  T  L  *  F  N  S  *  C  *  P  F  R  S  G  K  V  W  T  C  C  S  P  C  L  G  L  V  V  Y  *  K  S  S  T  E  P  Q  S  C  W  C  V  P  E  R  C   </first_frame>
            <second_frame>  R  G  V  I  P  L  V  D  A  D  I  Q  T  S  G  A  K  A  A  S  C  A  Q  L  A  S  L  A  T  S  S  T  K   : V  Y  S  D  Q  G  A  P  A  S  F  K  V  P  A  G  A  V  I  P  F  G  S  M  E  T  A  L  E  T  N  K  L  M  E  T  F  T  L  L  V  E  Q  I  E  T  A  E  I  D  G  G  E  L  D  K  H  C  E  D  L  Q  K  L  I  S  S  L  L  P  G  Q  D  V  I  E  S  L  G  E  I  F  P  G  N  A  R  L  I  V  R  S  S  A  N  V  E  D  L  A  G  M  S  A  A  G  L  Y  D  S  I  P  N  V  S  P  S  D  P  V  R  F  G  H  A  V  A  R  V  W  A  S  L  Y  T  R  R  A  V  L  S  R  R  A  A  G  V  S  Q  K  D  A  </second_frame>
            <third_frame>   E  V  L  F  L  L  L  M  Q  I  Y  K  P  L  V  Q  K  L  L  L  V  L  N  *  L  H  W  P  L  L  L  L  K  :  F  I  V  T  K  V  H  Q  H  H  L  K  F  L  L  E  Q  L  F  H  L  V  P  W  K  R  H  W  K  R  T  S  *  W  R  P  S  H  C  L  L  S  R  *  K  Q  L  K  L  M  A  V  N  L  I  N  T  V  R  I  S  R  S  *  Y  L  R  Y  C  L  D  K  M  S  S  K  A  W  E  K  Y  F  P  V  M  H  V  *  *  C  V  Q  V  L  M  S  R  T  W  R  G  C  Q  Q  P  D  F  M  I  Q  F  L  M  L  A  L  Q  I  R  *  G  L  D  M  L  *  P  V  F  G  P  R  C  I  L  E  E  Q  Y  *  A  A  E  L  L  V  C  P  R  K  M  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69446" stop="69347"/>
                    <exon start="68990" stop="68536"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RGVIPLVDADIQTSGAKAASCAQLASLATSSTKVYSDQGAPASFKVPAGAVIPFGSMETALETNKLMETFTLLVEQIETAEIDGGELDKHCEDLQKLISSLLPGQDVIESLGEIFPGNARLIVRSSANVEDLAGMSAAGLYDSIPNVSPSDPVRFGHAVARVWASLYTRRAVLSRRAAGVSQKDA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="69128" e_stop="68397"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.948"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.948">
            <gDNA_exon_boundary e_start="69128" e_stop="68397" e_length="732"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="69128" stop="68397"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E602146" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTAAATTTCGGTGTTGGTCAACATCGATTGGTACTTTATTTTTGCGTTTAGCTTATCATAGCACAAACGATGGATGCCATTGGTGCAATATATGTCTTTGCCCTTTTTTTTTGGGTCTGATGATTTATCTGATTGCAGTTTATAGTGACCAAGGTGCACCAGCATCATTTAAAGTTCCTGCTGGAGCAGTTATTCCATTTGGTTCCATGGAAACGGCATTGGAAACGAACAAGTTAATGGAGACCTTCACATTGCTTGTTGAGCAGATAGAAACAGCTGAAATTGATGGCGGTGAACTTGATAAACACTGTGAGGATCTCCAGAAGTTAATATCTTCGTTATTGCCTGGACAAGATGTCATCGAAAGCTTGGGAGAAATATTTCCCGGTAATGCACGTTTAATAGTGCGTTCAAGTGCTAATGTCGAGGACTTGGCGGGGATGTCAGCAGCCGGACTTTATGATTCAATTCCTAATGTTAGCCCTTCAGATCCGGTAAGGTTTGGACATGCTGTAGCCCGTGTTTGGGCCTCGTTGTATACTAGAAGAGCAGTACTGAGCCGCAGAGCTGCTGGTGTGTCCCAGAAAGATGCTACGATGGCCGTGCTAGTGCAAGAAATGCTTTCACCAGATTTGTCTTTTGTCCTCCACACACTGAGCCCCACGGACAACAATCATAACTTCATTGAGGCTGAAATTGCACCTGGACTCGGTGAAACACTCGCTTCAGGAA</gDNA_template>
            <first_frame> L  N  F  G  V  G  Q  H  R  L  V  L  Y  F  C  V  *  L  I  I  A  Q  T  M  D  A  I  G  A  I  Y  V  F  A  L  F  F  W  V  *  *  F  I  *  L  Q  F  I  V  T  K  V  H  Q  H  H  L  K  F  L  L  E  Q  L  F  H  L  V  P  W  K  R  H  W  K  R  T  S  *  W  R  P  S  H  C  L  L  S  R  *  K  Q  L  K  L  M  A  V  N  L  I  N  T  V  R  I  S  R  S  *  Y  L  R  Y  C  L  D  K  M  S  S  K  A  W  E  K  Y  F  P  V  M  H  V  *  *  C  V  Q  V  L  M  S  R  T  W  R  G  C  Q  Q  P  D  F  M  I  Q  F  L  M  L  A  L  Q  I  R  *  G  L  D  M  L  *  P  V  F  G  P  R  C  I  L  E  E  Q  Y  *  A  A  E  L  L  V  C  P  R  K  M  L  R  W  P  C  *  C  K  K  C  F  H  Q  I  C  L  L  S  S  T  H  *  A  P  R  T  T  I  I  T  S  L  R  L  K  L  H  L  D  S  V  K  H  S  L  Q  E </first_frame>
            <second_frame>  *  I  S  V  L  V  N  I  D  W  Y  F  I  F  A  F  S  L  S  *  H  K  R  W  M  P  L  V  Q  Y  M  S  L  P  F  F  F  G  S  D  D  L  S  D  C  S  L  *  *  P  R  C  T  S  I  I  *  S  S  C  W  S  S  Y  S  I  W  F  H  G  N  G  I  G  N  E  Q  V  N  G  D  L  H  I  A  C  *  A  D  R  N  S  *  N  *  W  R  *  T  *  *  T  L  *  G  S  P  E  V  N  I  F  V  I  A  W  T  R  C  H  R  K  L  G  R  N  I  S  R  *  C  T  F  N  S  A  F  K  C  *  C  R  G  L  G  G  D  V  S  S  R  T  L  *  F  N  S  *  C  *  P  F  R  S  G  K  V  W  T  C  C  S  P  C  L  G  L  V  V  Y  *  K  S  S  T  E  P  Q  S  C  W  C  V  P  E  R  C  Y  D  G  R  A  S  A  R  N  A  F  T  R  F  V  F  C  P  P  H  T  E  P  H  G  Q  Q  S  *  L  H  *  G  *  N  C  T  W  T  R  *  N  T  R  F  R   </second_frame>
            <third_frame>   K  F  R  C  W  S  T  S  I  G  T  L  F  L  R  L  A  Y  H  S  T  N  D  G  C  H  W  C  N  I  C  L  C  P  F  F  L  G  L  M  I  Y  L  I  A  V  Y  S  D  Q  G  A  P  A  S  F  K  V  P  A  G  A  V  I  P  F  G  S  M  E  T  A  L  E  T  N  K  L  M  E  T  F  T  L  L  V  E  Q  I  E  T  A  E  I  D  G  G  E  L  D  K  H  C  E  D  L  Q  K  L  I  S  S  L  L  P  G  Q  D  V  I  E  S  L  G  E  I  F  P  G  N  A  R  L  I  V  R  S  S  A  N  V  E  D  L  A  G  M  S  A  A  G  L  Y  D  S  I  P  N  V  S  P  S  D  P  V  R  F  G  H  A  V  A  R  V  W  A  S  L  Y  T  R  R  A  V  L  S  R  R  A  A  G  V  S  Q  K  D  A  T  M  A  V  L  V  Q  E  M  L  S  P  D  L  S  F  V  L  H  T  L  S  P  T  D  N  N  H  N  F  I  E  A  E  I  A  P  G  L  G  E  T  L  A  S  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69126" stop="68398"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>729</number_coding_nucleotides>
                  <number_encoded_amino_acids>243</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KFRCWSTSIGTLFLRLAYHSTNDGCHWCNICLCPFFLGLMIYLIAVYSDQGAPASFKVPAGAVIPFGSMETALETNKLMETFTLLVEQIETAEIDGGELDKHCEDLQKLISSLLPGQDVIESLGEIFPGNARLIVRSSANVEDLAGMSAAGLYDSIPNVSPSDPVRFGHAVARVWASLYTRRAVLSRRAAGVSQKDATMAVLVQEMLSPDLSFVLHTLSPTDNNHNFIEAEIAPGLGETLASG</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="72903" PGL_stop="69739"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="72903" e_stop="72875"/>
            <exon e_start="72785" e_stop="72733"/>
            <exon e_start="72416" e_stop="72208"/>
            <exon e_start="72119" e_stop="72001"/>
            <exon e_start="71432" e_stop="71362"/>
            <exon e_start="71227" e_stop="71110"/>
            <exon e_start="70719" e_stop="70633"/>
            <exon e_start="70524" e_stop="70438"/>
            <exon e_start="69957" e_stop="69881"/>
            <exon e_start="69780" e_stop="69739"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.988" e_score="0.966"/>
          <exon-intron don_prob="0.963" acc_prob="0.921" e_score="0.981"/>
          <exon-intron don_prob="0.857" acc_prob="0.000" e_score="0.957"/>
          <exon-intron don_prob="0.999" acc_prob="0.885" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.242" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.985" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.976"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="72903" e_stop="72875" e_length="29"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.988">
            <gDNA_intron_boundary i_start="72874" i_stop="72786" i_length="89"/>
          </intron>
          <exon e_serial="2" e_score="0.981">
            <gDNA_exon_boundary e_start="72785" e_stop="72733" e_length="53"/>
          </exon>
          <intron i_serial="2" don_prob="0.963" acc_prob="0.921">
            <gDNA_intron_boundary i_start="72732" i_stop="72417" i_length="316"/>
          </intron>
          <exon e_serial="3" e_score="0.957">
            <gDNA_exon_boundary e_start="72416" e_stop="72208" e_length="209"/>
          </exon>
          <intron i_serial="3" don_prob="0.857" acc_prob="0.000">
            <gDNA_intron_boundary i_start="72207" i_stop="72120" i_length="88"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="72119" e_stop="72001" e_length="119"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.885">
            <gDNA_intron_boundary i_start="72000" i_stop="71433" i_length="568"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="71432" e_stop="71362" e_length="71"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.242">
            <gDNA_intron_boundary i_start="71361" i_stop="71228" i_length="134"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="71227" e_stop="71110" e_length="118"/>
          </exon>
          <intron i_serial="6" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="71109" i_stop="70720" i_length="390"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="70719" e_stop="70633" e_length="87"/>
          </exon>
          <intron i_serial="7" don_prob="0.000" acc_prob="0.985">
            <gDNA_intron_boundary i_start="70632" i_stop="70525" i_length="108"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="70524" e_stop="70438" e_length="87"/>
          </exon>
          <intron i_serial="8" don_prob="1.000" acc_prob="0.999">
            <gDNA_intron_boundary i_start="70437" i_stop="69958" i_length="480"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="69957" e_stop="69881" e_length="77"/>
          </exon>
          <intron i_serial="9" don_prob="0.986" acc_prob="0.998">
            <gDNA_intron_boundary i_start="69880" i_stop="69781" i_length="100"/>
          </intron>
          <exon e_serial="10" e_score="0.976">
            <gDNA_exon_boundary e_start="69780" e_stop="69739" e_length="42"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72903" stop="72875"/>
              <exon start="72785" stop="72733"/>
              <exon start="72416" stop="72208"/>
              <exon start="72119" stop="72029"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475540" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="72356" stop="72208"/>
              <exon start="72119" stop="72001"/>
              <exon start="71432" stop="71362"/>
              <exon start="71227" stop="71110"/>
              <exon start="70719" stop="70633"/>
              <exon start="70524" stop="70438"/>
              <exon start="69957" stop="69881"/>
              <exon start="69780" stop="69739"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E704858" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGATGCTTCAATAGCTATGCGTCAGAAG : TGGCGTCTCTGCGAAATTGGGCTTGAAGACTATGCATTTGTTCTTTTGAGCAG : GTTTGTGAATGCAGTTGAAGCTCTAGGAGGAGCTGATTGGCTTGCAGAGAATGTAACTGTGAAAAACGTTAGCTCTTGGAATGATCCAATTGGAGCACTTACAGTAGGAATCCAACAGCTAGGCCTATCTGGTTGGAAGCCCGAGGAGTGCAAAGCTGTTGGAAATGAACTTCTGTCATGGAAAGAAAGGGGTATTTCAGAAATTGAAG : GCAGCGAAGATGGTAAGACTATATGGGCATTAAGACTAAAAGCGACTCTTGATAGAAGTCGAAGGTTAACTGAGGAGTATTCCGAGACACTTATCCAAATATTCCCTGAAAAAGTACAG : ATTTTAGGAAAATCTTTGGGAATTCCTGAAAATACTGTCAGAACATTTACTGAAGCTGAAATTCGAGCAGG : TGTGGTTTTTCAGGTTTCGAAGTTTGCTACTCTACTTTTGAAGGCTGTTAGAAGGACAATTGGGTCATCGGGATGGGACGTTCTCGTTCCAGGAGATGCTTTTGGAGAGCTAATACAG : GTGGATAGAATTATCCCCGGCACTCTACCATCATCTGCAACAGGACCTGTTATTCTTGTAGTGAACAAAGCTGATGGAGATGAAGAG : GTGACTGCCGCAGGGAGTAACATATCTGGAGTTGTACTTCTACAGGAGCTACCACATTTATCTCATCTAGGTGTTAGGGCCCGGCAG : GAAAAGGTTGTTTTTGTGACCTGCGATGACGATGACAAAGTTTCTGATGTAAGACAGCTACTAGGAAAATATGTGAG : GTTAGAAGCATCATCAACTGGTGTAAAGTTAACTGCTTCTTC</gDNA_template>
            <first_frame> Q  M  L  Q  *  L  C  V  R  S :   G  V  S  A  K  L  G  L  K  T  M  H  L  F  F  *  A   : G  L  *  M  Q  L  K  L  *  E  E  L  I  G  L  Q  R  M  *  L  *  K  T  L  A  L  G  M  I  Q  L  E  H  L  Q  *  E  S  N  S  *  A  Y  L  V  G  S  P  R  S  A  K  L  L  E  M  N  F  C  H  G  K  K  G  V  F  Q  K  L  K  :  A  A  K  M  V  R  L  Y  G  H  *  D  *  K  R  L  L  I  E  V  E  G  *  L  R  S  I  P  R  H  L  S  K  Y  S  L  K  K  Y  R :   F  *  E  N  L  W  E  F  L  K  I  L  S  E  H  L  L  K  L  K  F  E  Q   : V  W  F  F  R  F  R  S  L  L  L  Y  F  *  R  L  L  E  G  Q  L  G  H  R  D  G  T  F  S  F  Q  E  M  L  L  E  S  *  Y  R :   W  I  E  L  S  P  A  L  Y  H  H  L  Q  Q  D  L  L  F  L  *  *  T  K  L  M  E  M  K  R :   *  L  P  Q  G  V  T  Y  L  E  L  Y  F  Y  R  S  Y  H  I  Y  L  I  *  V  L  G  P  G  R :   K  R  L  F  L  *  P  A  M  T  M  T  K  F  L  M  *  D  S  Y  *  E  N  M  *   : G  *  K  H  H  Q  L  V  *  S  *  L  L  L  </first_frame>
            <second_frame>  R  C  F  N  S  Y  A  S  E   : V  A  S  L  R  N  W  A  *  R  L  C  I  C  S  F  E  Q  :  V  C  E  C  S  *  S  S  R  R  S  *  L  A  C  R  E  C  N  C  E  K  R  *  L  L  E  *  S  N  W  S  T  Y  S  R  N  P  T  A  R  P  I  W  L  E  A  R  G  V  Q  S  C  W  K  *  T  S  V  M  E  R  K  G  Y  F  R  N  *  R :   Q  R  R  W  *  D  Y  M  G  I  K  T  K  S  D  S  *  *  K  S  K  V  N  *  G  V  F  R  D  T  Y  P  N  I  P  *  K  S  T   : D  F  R  K  I  F  G  N  S  *  K  Y  C  Q  N  I  Y  *  S  *  N  S  S  R  :  C  G  F  S  G  F  E  V  C  Y  S  T  F  E  G  C  *  K  D  N  W  V  I  G  M  G  R  S  R  S  R  R  C  F  W  R  A  N  T   : G  G  *  N  Y  P  R  H  S  T  I  I  C  N  R  T  C  Y  S  C  S  E  Q  S  *  W  R  *  R   : G  D  C  R  R  E  *  H  I  W  S  C  T  S  T  G  A  T  T  F  I  S  S  R  C  *  G  P  A   : G  K  G  C  F  C  D  L  R  *  R  *  Q  S  F  *  C  K  T  A  T  R  K  I  C  E  :  V  R  S  I  I  N  W  C  K  V  N  C  F  F </second_frame>
            <third_frame>   D  A  S  I  A  M  R  Q  K  :  W  R  L  C  E  I  G  L  E  D  Y  A  F  V  L  L  S  R :   F  V  N  A  V  E  A  L  G  G  A  D  W  L  A  E  N  V  T  V  K  N  V  S  S  W  N  D  P  I  G  A  L  T  V  G  I  Q  Q  L  G  L  S  G  W  K  P  E  E  C  K  A  V  G  N  E  L  L  S  W  K  E  R  G  I  S  E  I  E   : G  S  E  D  G  K  T  I  W  A  L  R  L  K  A  T  L  D  R  S  R  R  L  T  E  E  Y  S  E  T  L  I  Q  I  F  P  E  K  V  Q  :  I  L  G  K  S  L  G  I  P  E  N  T  V  R  T  F  T  E  A  E  I  R  A  G :   V  V  F  Q  V  S  K  F  A  T  L  L  L  K  A  V  R  R  T  I  G  S  S  G  W  D  V  L  V  P  G  D  A  F  G  E  L  I  Q  :  V  D  R  I  I  P  G  T  L  P  S  S  A  T  G  P  V  I  L  V  V  N  K  A  D  G  D  E  E  :  V  T  A  A  G  S  N  I  S  G  V  V  L  L  Q  E  L  P  H  L  S  H  L  G  V  R  A  R  Q  :  E  K  V  V  F  V  T  C  D  D  D  D  K  V  S  D  V  R  Q  L  L  G  K  Y  V  R :   L  E  A  S  S  T  G  V  K  L  T  A  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="72901" stop="72875"/>
                    <exon start="72785" stop="72733"/>
                    <exon start="72416" stop="72208"/>
                    <exon start="72119" stop="72001"/>
                    <exon start="71432" stop="71362"/>
                    <exon start="71227" stop="71110"/>
                    <exon start="70719" stop="70633"/>
                    <exon start="70524" stop="70438"/>
                    <exon start="69957" stop="69881"/>
                    <exon start="69780" stop="69741"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>888</number_coding_nucleotides>
                  <number_encoded_amino_acids>296</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DASIAMRQKWRLCEIGLEDYAFVLLSRFVNAVEALGGADWLAENVTVKNVSSWNDPIGALTVGIQQLGLSGWKPEECKAVGNELLSWKERGISEIEGSEDGKTIWALRLKATLDRSRRLTEEYSETLIQIFPEKVQILGKSLGIPENTVRTFTEAEIRAGVVFQVSKFATLLLKAVRRTIGSSGWDVLVPGDAFGELIQVDRIIPGTLPSSATGPVILVVNKADGDEEVTAAGSNISGVVLLQELPHLSHLGVRARQEKVVFVTCDDDDKVSDVRQLLGKYVRLEASSTGVKLTAS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="77830" PGL_stop="72915"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="77830" e_stop="77630"/>
            <exon e_start="76247" e_stop="76161"/>
            <exon e_start="76091" e_stop="75960"/>
            <exon e_start="75117" e_stop="74992"/>
            <exon e_start="74880" e_stop="74702"/>
            <exon e_start="74004" e_stop="73920"/>
            <exon e_start="73042" e_stop="72915"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.942" acc_prob="0.994" e_score="0.990"/>
          <exon-intron don_prob="0.964" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.981" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.897" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.882" acc_prob="0.955" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.990">
            <gDNA_exon_boundary e_start="77830" e_stop="77630" e_length="201"/>
          </exon>
          <intron i_serial="1" don_prob="0.942" acc_prob="0.994">
            <gDNA_intron_boundary i_start="77629" i_stop="76248" i_length="1382"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="76247" e_stop="76161" e_length="87"/>
          </exon>
          <intron i_serial="2" don_prob="0.964" acc_prob="0.995">
            <gDNA_intron_boundary i_start="76160" i_stop="76092" i_length="69"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="76091" e_stop="75960" e_length="132"/>
          </exon>
          <intron i_serial="3" don_prob="0.981" acc_prob="0.996">
            <gDNA_intron_boundary i_start="75959" i_stop="75118" i_length="842"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="75117" e_stop="74992" e_length="126"/>
          </exon>
          <intron i_serial="4" don_prob="0.999" acc_prob="0.897">
            <gDNA_intron_boundary i_start="74991" i_stop="74881" i_length="111"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="74880" e_stop="74702" e_length="179"/>
          </exon>
          <intron i_serial="5" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="74701" i_stop="74005" i_length="697"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="74004" e_stop="73920" e_length="85"/>
          </exon>
          <intron i_serial="6" don_prob="0.882" acc_prob="0.955">
            <gDNA_intron_boundary i_start="73919" i_stop="73043" i_length="877"/>
          </intron>
          <exon e_serial="7" e_score="0.992">
            <gDNA_exon_boundary e_start="73042" e_stop="72915" e_length="128"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77830" stop="77630"/>
              <exon start="76247" stop="76161"/>
              <exon start="76091" stop="75960"/>
              <exon start="75117" stop="74992"/>
              <exon start="74880" stop="74702"/>
              <exon start="74004" stop="73920"/>
              <exon start="73042" stop="73008"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736262" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77766" stop="77630"/>
              <exon start="76247" stop="76161"/>
              <exon start="76091" stop="75984"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E737921" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="77660" stop="77630"/>
              <exon start="76247" stop="76161"/>
              <exon start="76091" stop="75960"/>
              <exon start="75117" stop="74992"/>
              <exon start="74880" stop="74702"/>
              <exon start="74004" stop="73920"/>
              <exon start="73042" stop="72915"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E736374" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="76206" stop="76161"/>
              <exon start="76091" stop="75960"/>
              <exon start="75117" stop="74992"/>
              <exon start="74880" stop="74702"/>
              <exon start="74004" stop="73920"/>
              <exon start="73042" stop="72948"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E344684" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ACAATTACTAGCCAGGCAGTTGTTCCTGACGTAGTAACAAGTCCATTTGTGGAGCAATGGCAAGGGAGGGCTGCATCTTTTGTACGTTCAAACGACCAGCTGGATTCTGATAAAAATAGGAAGTGGGACACATCAGGTCTCACCGGAATTTCCCTAAAGCTTGTTGAAGGTGATAAGAATGCTCGAAACTGGTGGCGGAAG : CTTGAGGTTGTTCGAGAACTAGTTGTTGAAAACATGGATAGTTCACATCGCTTGGAGGCTCTCACGTATGCAGCTGTCTATCTAAAG : TGGATAAATACAGGGCAAATTCCTTGCCTTGAAGATGGGGGTCACCATCGACCAAATAGACATGCAGAGATTTCCAGGCTTATATTTCGTGAAGTAGAAAAAGTCTTGAGCAGGAAAGACACTACACTTCAG : GAAATACTTGTGATCCGCAAGATGCAACCGTGCTTGCCTTCTTTTAAAGCAGAATTCACTGCATCCGTTCCTTTAACGAGAATCAGGGACATCGCTCATAGGAATGATATTCCGCATGATCTTAAG : CAAGAAATCAAACATACTATACAAAACAAGCTCCATAGAAATGCTGGCCCTGAAGATCTAGTATCCACAGAAGCAATGCTCGAAAGAATTACCAAACAACCTGGACAATACAGTGAGGCATTTGTAGAGCAATTCAAGATTTTCCACAATGAACTAAAAGATTTCTTCAATGCTGGGAG : TCTTGATGAACAGCTGGAATCTATAAGAGAATCACTCGACGGAAGTAGCTTGACAATGCTTTCATCATTCTTGGAGTCCAAAAAG : GAATTGGTTAGATTGGATGAAAAACATAATGTTTCAGAGACTGAAAGAACTGGATTTCTAGTCAGGACTATCAACTCTCTGAATGCTCTTCGTGAAGTAATTTCCAAGGGTCTTGAAAGTGGCCTCCG</gDNA_template>
            <first_frame> T  I  T  S  Q  A  V  V  P  D  V  V  T  S  P  F  V  E  Q  W  Q  G  R  A  A  S  F  V  R  S  N  D  Q  L  D  S  D  K  N  R  K  W  D  T  S  G  L  T  G  I  S  L  K  L  V  E  G  D  K  N  A  R  N  W  W  R  K  :  L  E  V  V  R  E  L  V  V  E  N  M  D  S  S  H  R  L  E  A  L  T  Y  A  A  V  Y  L  K  :  W  I  N  T  G  Q  I  P  C  L  E  D  G  G  H  H  R  P  N  R  H  A  E  I  S  R  L  I  F  R  E  V  E  K  V  L  S  R  K  D  T  T  L  Q  :  E  I  L  V  I  R  K  M  Q  P  C  L  P  S  F  K  A  E  F  T  A  S  V  P  L  T  R  I  R  D  I  A  H  R  N  D  I  P  H  D  L  K  :  Q  E  I  K  H  T  I  Q  N  K  L  H  R  N  A  G  P  E  D  L  V  S  T  E  A  M  L  E  R  I  T  K  Q  P  G  Q  Y  S  E  A  F  V  E  Q  F  K  I  F  H  N  E  L  K  D  F  F  N  A  G  S :   L  D  E  Q  L  E  S  I  R  E  S  L  D  G  S  S  L  T  M  L  S  S  F  L  E  S  K  K  :  E  L  V  R  L  D  E  K  H  N  V  S  E  T  E  R  T  G  F  L  V  R  T  I  N  S  L  N  A  L  R  E  V  I  S  K  G  L  E  S  G  L   </first_frame>
            <second_frame>  Q  L  L  A  R  Q  L  F  L  T  *  *  Q  V  H  L  W  S  N  G  K  G  G  L  H  L  L  Y  V  Q  T  T  S  W  I  L  I  K  I  G  S  G  T  H  Q  V  S  P  E  F  P  *  S  L  L  K  V  I  R  M  L  E  T  G  G  G  S :   L  R  L  F  E  N  *  L  L  K  T  W  I  V  H  I  A  W  R  L  S  R  M  Q  L  S  I  *  S :   G  *  I  Q  G  K  F  L  A  L  K  M  G  V  T  I  D  Q  I  D  M  Q  R  F  P  G  L  Y  F  V  K  *  K  K  S  *  A  G  K  T  L  H  F  R :   K  Y  L  *  S  A  R  C  N  R  A  C  L  L  L  K  Q  N  S  L  H  P  F  L  *  R  E  S  G  T  S  L  I  G  M  I  F  R  M  I  L  S :   K  K  S  N  I  L  Y  K  T  S  S  I  E  M  L  A  L  K  I  *  Y  P  Q  K  Q  C  S  K  E  L  P  N  N  L  D  N  T  V  R  H  L  *  S  N  S  R  F  S  T  M  N  *  K  I  S  S  M  L  G   : V  L  M  N  S  W  N  L  *  E  N  H  S  T  E  V  A  *  Q  C  F  H  H  S  W  S  P  K  R :   N  W  L  D  W  M  K  N  I  M  F  Q  R  L  K  E  L  D  F  *  S  G  L  S  T  L  *  M  L  F  V  K  *  F  P  R  V  L  K  V  A  S  </second_frame>
            <third_frame>   N  Y  *  P  G  S  C  S  *  R  S  N  K  S  I  C  G  A  M  A  R  E  G  C  I  F  C  T  F  K  R  P  A  G  F  *  *  K  *  E  V  G  H  I  R  S  H  R  N  F  P  K  A  C  *  R  *  *  E  C  S  K  L  V  A  E   : A  *  G  C  S  R  T  S  C  *  K  H  G  *  F  T  S  L  G  G  S  H  V  C  S  C  L  S  K   : V  D  K  Y  R  A  N  S  L  P  *  R  W  G  S  P  S  T  K  *  T  C  R  D  F  Q  A  Y  I  S  *  S  R  K  S  L  E  Q  E  R  H  Y  T  S   : G  N  T  C  D  P  Q  D  A  T  V  L  A  F  F  *  S  R  I  H  C  I  R  S  F  N  E  N  Q  G  H  R  S  *  E  *  Y  S  A  *  S  *   : A  R  N  Q  T  Y  Y  T  K  Q  A  P  *  K  C  W  P  *  R  S  S  I  H  R  S  N  A  R  K  N  Y  Q  T  T  W  T  I  Q  *  G  I  C  R  A  I  Q  D  F  P  Q  *  T  K  R  F  L  Q  C  W  E  :  S  *  *  T  A  G  I  Y  K  R  I  T  R  R  K  *  L  D  N  A  F  I  I  L  G  V  Q  K   : G  I  G  *  I  G  *  K  T  *  C  F  R  D  *  K  N  W  I  S  S  Q  D  Y  Q  L  S  E  C  S  S  *  S  N  F  Q  G  S  *  K  W  P  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="77830" stop="77630"/>
                    <exon start="76247" stop="76161"/>
                    <exon start="76091" stop="75960"/>
                    <exon start="75117" stop="74992"/>
                    <exon start="74880" stop="74702"/>
                    <exon start="74004" stop="73920"/>
                    <exon start="73042" stop="72917"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>936</number_coding_nucleotides>
                  <number_encoded_amino_acids>312</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TITSQAVVPDVVTSPFVEQWQGRAASFVRSNDQLDSDKNRKWDTSGLTGISLKLVEGDKNARNWWRKLEVVRELVVENMDSSHRLEALTYAAVYLKWINTGQIPCLEDGGHHRPNRHAEISRLIFREVEKVLSRKDTTLQEILVIRKMQPCLPSFKAEFTASVPLTRIRDIAHRNDIPHDLKQEIKHTIQNKLHRNAGPEDLVSTEAMLERITKQPGQYSEAFVEQFKIFHNELKDFFNAGSLDEQLESIRESLDGSSLTMLSSFLESKKELVRLDEKHNVSETERTGFLVRTINSLNALREVISKGLESGL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="85096" PGL_stop="83182"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="85096" e_stop="84216"/>
            <exon e_start="84105" e_stop="83824"/>
            <exon e_start="83602" e_stop="83182"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.626" e_score="0.996"/>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="85096" e_stop="84216" e_length="881"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="84215" i_stop="84106" i_length="110"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="84105" e_stop="83824" e_length="282"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.626">
            <gDNA_intron_boundary i_start="83823" i_stop="83603" i_length="221"/>
          </intron>
          <exon e_serial="3" e_score="0.981">
            <gDNA_exon_boundary e_start="83602" e_stop="83182" e_length="421"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85096" stop="84699"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310265" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85091" stop="84539"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E305501" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85061" stop="84515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E300235" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85057" stop="84592"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E474932" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85057" stop="84629"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85036" stop="84463"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390674" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85036" stop="84507"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390673" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85036" stop="84514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302472" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85035" stop="84587"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294327" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85034" stop="84414"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291872" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="85034" stop="84468"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E291937" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84985" stop="84382"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E404114" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84985" stop="84444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E475355" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84982" stop="84377"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E301544" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84881" stop="84227"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E335463" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84879" stop="84444"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E302969" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84859" stop="84326"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472912" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84854" stop="84526"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E472914" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84837" stop="84261"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E278924" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84240" stop="84216"/>
              <exon start="84105" stop="83824"/>
              <exon start="83602" stop="83182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390928" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84028" stop="83824"/>
              <exon start="83602" stop="83182"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E390927" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84027" stop="83824"/>
              <exon start="83602" stop="83222"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E413638" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83543" stop="83190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E695168" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="83543" stop="83190"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E691328" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTATGGATTACTATACACTTGTGTTTGTGTCAATTTTAGTGTTGGCTAATATCATAGCAAAAATATGTAGCAAAGGAAGCAAAAAACTTCCACCAGGTCCATCACCATGGCCAATTATTGGAAACCTTCAGTTGTTAGGTGCAAAACCTCATATATCACTAGCCAATCTTGCAAAAAATTATGGTCCAATTATGAGTTTAAAGTTAGGTCAAATAACAACAATAGTCATTTCCTCATCAACCATTGCAAAACAAGTCCTTAAAACTCAAGATCAAGCCTTTTCATCTAGATTTGCTCCTAATGCTCTTCAAGCGCACAACCATTACAAATTTTCTGTGGCATGGCTTCCTGTTTGTCCTCAATGGCGAACGCTTCGAAGAATATTGAACACTAACCTCTTATCTTCCAATAAGCTTGATGCAAATCAACATCTAAGGTCTCAAAAGGTGAAACAATTGATTGATTATTGTGACAAATGTAGTCAACAAGGTGAAGCTTTGGATATAGGTCAAGTTGTTTTCAAGACTAGTCTTAATTTGTTGTCAAACACACTTTTCTCCAAGGATTTGGCTGATCCTTTTTCAGATTCAAAGGTAGAGTTGAAGGAAGTTATATGGGGTATCATGGCTGAGGTAGGGAAGCCTAATTTAGTAGATTTTTTCCCCATACTTGAAAAAATTGATCTTCAAGGAATAAGACGTCGCGCTATCATTCATTTTGGTAAGTTGTTTAAACTTTTTGATGATTTGATCAACGAACGATTGGAGGAAAAGAAAAGACCAGGATTCATGGAAAAGAGCGATGTTCTTGAAATATTTCTCAATATTACTGAAAAAAATCCTCAAGAGATTGATCATAATCACATCAAGTCCATGTTCATG : GACCTATTTGGTGCGGGTACTGATACAACCACAAGCACATTGGAATGGGCAATGGCAGAATTGCTTAAACAACCTGAGATAATAAAAAAAGCTCAAGTTGAACTTGCTGAAATCATTGGGAAAGGAAAATTAATAGAAGAAGCTGATGTTTTTCGACTCCCTTACTTGCAATGCATTATCAAAGAAACATTAAGATTGCATCCACCGGTTCCGCTCTTAGTTCCGCGCAAAGTAGACCAAGATGTTGAATTGTGTGACTACATCATCCCAAAGGGCTCACAG : GTACTAGTTAATGTGTGGGCGATTGGTCGAGATTTTACTTTTTGGAAGGATCCTTTAGAGTTTAAACCTGAGAGATTTTTGAATTTGGATCTGGACATGCGAGGACAAGATTTTGAGTTGATTCCATTTGGTGCTGGACGAAGAATATGCCCTGGGTTGCCACTAGCATTGAGGATGATTCCAGTAATGTTGGGCTCACTGTTGAATTCATTCAATTGGAAACTTGATGCAGGTATTGAGCCACAAGAATTAGACATGGAGGAGAAGTTTGGTATTACCTTAGCCAAAGCTCATCCTTTGCGAGCTATCCCCTCTCCTCTTTGATCGATGTTGCATTGCCTAGTCGATAAATATTTATATGTATTTGATATTTACGCTGAAGCAAGTATTTTAATCTAAATAATCATATATATGTATATTG</gDNA_template>
            <first_frame> L  W  I  T  I  H  L  C  L  C  Q  F  *  C  W  L  I  S  *  Q  K  Y  V  A  K  E  A  K  N  F  H  Q  V  H  H  H  G  Q  L  L  E  T  F  S  C  *  V  Q  N  L  I  Y  H  *  P  I  L  Q  K  I  M  V  Q  L  *  V  *  S  *  V  K  *  Q  Q  *  S  F  P  H  Q  P  L  Q  N  K  S  L  K  L  K  I  K  P  F  H  L  D  L  L  L  M  L  F  K  R  T  T  I  T  N  F  L  W  H  G  F  L  F  V  L  N  G  E  R  F  E  E  Y  *  T  L  T  S  Y  L  P  I  S  L  M  Q  I  N  I  *  G  L  K  R  *  N  N  *  L  I  I  V  T  N  V  V  N  K  V  K  L  W  I  *  V  K  L  F  S  R  L  V  L  I  C  C  Q  T  H  F  S  P  R  I  W  L  I  L  F  Q  I  Q  R  *  S  *  R  K  L  Y  G  V  S  W  L  R  *  G  S  L  I  *  *  I  F  S  P  Y  L  K  K  L  I  F  K  E  *  D  V  A  L  S  F  I  L  V  S  C  L  N  F  L  M  I  *  S  T  N  D  W  R  K  R  K  D  Q  D  S  W  K  R  A  M  F  L  K  Y  F  S  I  L  L  K  K  I  L  K  R  L  I  I  I  T  S  S  P  C  S  W :   T  Y  L  V  R  V  L  I  Q  P  Q  A  H  W  N  G  Q  W  Q  N  C  L  N  N  L  R  *  *  K  K  L  K  L  N  L  L  K  S  L  G  K  E  N  *  *  K  K  L  M  F  F  D  S  L  T  C  N  A  L  S  K  K  H  *  D  C  I  H  R  F  R  S  *  F  R  A  K  *  T  K  M  L  N  C  V  T  T  S  S  Q  R  A  H  R :   Y  *  L  M  C  G  R  L  V  E  I  L  L  F  G  R  I  L  *  S  L  N  L  R  D  F  *  I  W  I  W  T  C  E  D  K  I  L  S  *  F  H  L  V  L  D  E  E  Y  A  L  G  C  H  *  H  *  G  *  F  Q  *  C  W  A  H  C  *  I  H  S  I  G  N  L  M  Q  V  L  S  H  K  N  *  T  W  R  R  S  L  V  L  P  *  P  K  L  I  L  C  E  L  S  P  L  L  F  D  R  C  C  I  A  *  S  I  N  I  Y  M  Y  L  I  F  T  L  K  Q  V  F  *  S  K  *  S  Y  I  C  I  L </first_frame>
            <second_frame>  Y  G  L  L  Y  T  C  V  C  V  N  F  S  V  G  *  Y  H  S  K  N  M  *  Q  R  K  Q  K  T  S  T  R  S  I  T  M  A  N  Y  W  K  P  S  V  V  R  C  K  T  S  Y  I  T  S  Q  S  C  K  K  L  W  S  N  Y  E  F  K  V  R  S  N  N  N  N  S  H  F  L  I  N  H  C  K  T  S  P  *  N  S  R  S  S  L  F  I  *  I  C  S  *  C  S  S  S  A  Q  P  L  Q  I  F  C  G  M  A  S  C  L  S  S  M  A  N  A  S  K  N  I  E  H  *  P  L  I  F  Q  *  A  *  C  K  S  T  S  K  V  S  K  G  E  T  I  D  *  L  L  *  Q  M  *  S  T  R  *  S  F  G  Y  R  S  S  C  F  Q  D  *  S  *  F  V  V  K  H  T  F  L  Q  G  F  G  *  S  F  F  R  F  K  G  R  V  E  G  S  Y  M  G  Y  H  G  *  G  R  E  A  *  F  S  R  F  F  P  H  T  *  K  N  *  S  S  R  N  K  T  S  R  Y  H  S  F  W  *  V  V  *  T  F  *  *  F  D  Q  R  T  I  G  G  K  E  K  T  R  I  H  G  K  E  R  C  S  *  N  I  S  Q  Y  Y  *  K  K  S  S  R  D  *  S  *  S  H  Q  V  H  V  H   : G  P  I  W  C  G  Y  *  Y  N  H  K  H  I  G  M  G  N  G  R  I  A  *  T  T  *  D  N  K  K  S  S  S  *  T  C  *  N  H  W  E  R  K  I  N  R  R  S  *  C  F  S  T  P  L  L  A  M  H  Y  Q  R  N  I  K  I  A  S  T  G  S  A  L  S  S  A  Q  S  R  P  R  C  *  I  V  *  L  H  H  P  K  G  L  T   : G  T  S  *  C  V  G  D  W  S  R  F  Y  F  L  E  G  S  F  R  V  *  T  *  E  I  F  E  F  G  S  G  H  A  R  T  R  F  *  V  D  S  I  W  C  W  T  K  N  M  P  W  V  A  T  S  I  E  D  D  S  S  N  V  G  L  T  V  E  F  I  Q  L  E  T  *  C  R  Y  *  A  T  R  I  R  H  G  G  E  V  W  Y  Y  L  S  Q  S  S  S  F  A  S  Y  P  L  S  S  L  I  D  V  A  L  P  S  R  *  I  F  I  C  I  *  Y  L  R  *  S  K  Y  F  N  L  N  N  H  I  Y  V  Y   </second_frame>
            <third_frame>   M  D  Y  Y  T  L  V  F  V  S  I  L  V  L  A  N  I  I  A  K  I  C  S  K  G  S  K  K  L  P  P  G  P  S  P  W  P  I  I  G  N  L  Q  L  L  G  A  K  P  H  I  S  L  A  N  L  A  K  N  Y  G  P  I  M  S  L  K  L  G  Q  I  T  T  I  V  I  S  S  S  T  I  A  K  Q  V  L  K  T  Q  D  Q  A  F  S  S  R  F  A  P  N  A  L  Q  A  H  N  H  Y  K  F  S  V  A  W  L  P  V  C  P  Q  W  R  T  L  R  R  I  L  N  T  N  L  L  S  S  N  K  L  D  A  N  Q  H  L  R  S  Q  K  V  K  Q  L  I  D  Y  C  D  K  C  S  Q  Q  G  E  A  L  D  I  G  Q  V  V  F  K  T  S  L  N  L  L  S  N  T  L  F  S  K  D  L  A  D  P  F  S  D  S  K  V  E  L  K  E  V  I  W  G  I  M  A  E  V  G  K  P  N  L  V  D  F  F  P  I  L  E  K  I  D  L  Q  G  I  R  R  R  A  I  I  H  F  G  K  L  F  K  L  F  D  D  L  I  N  E  R  L  E  E  K  K  R  P  G  F  M  E  K  S  D  V  L  E  I  F  L  N  I  T  E  K  N  P  Q  E  I  D  H  N  H  I  K  S  M  F  M  :  D  L  F  G  A  G  T  D  T  T  T  S  T  L  E  W  A  M  A  E  L  L  K  Q  P  E  I  I  K  K  A  Q  V  E  L  A  E  I  I  G  K  G  K  L  I  E  E  A  D  V  F  R  L  P  Y  L  Q  C  I  I  K  E  T  L  R  L  H  P  P  V  P  L  L  V  P  R  K  V  D  Q  D  V  E  L  C  D  Y  I  I  P  K  G  S  Q  :  V  L  V  N  V  W  A  I  G  R  D  F  T  F  W  K  D  P  L  E  F  K  P  E  R  F  L  N  L  D  L  D  M  R  G  Q  D  F  E  L  I  P  F  G  A  G  R  R  I  C  P  G  L  P  L  A  L  R  M  I  P  V  M  L  G  S  L  L  N  S  F  N  W  K  L  D  A  G  I  E  P  Q  E  L  D  M  E  E  K  F  G  I  T  L  A  K  A  H  P  L  R  A  I  P  S  P  L  *  S  M  L  H  C  L  V  D  K  Y  L  Y  V  F  D  I  Y  A  E  A  S  I  L  I  *  I  I  I  Y  M  Y  I  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="85094" stop="84216"/>
                    <exon start="84105" stop="83824"/>
                    <exon start="83602" stop="83279"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1482</number_coding_nucleotides>
                  <number_encoded_amino_acids>494</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MDYYTLVFVSILVLANIIAKICSKGSKKLPPGPSPWPIIGNLQLLGAKPHISLANLAKNYGPIMSLKLGQITTIVISSSTIAKQVLKTQDQAFSSRFAPNALQAHNHYKFSVAWLPVCPQWRTLRRILNTNLLSSNKLDANQHLRSQKVKQLIDYCDKCSQQGEALDIGQVVFKTSLNLLSNTLFSKDLADPFSDSKVELKEVIWGIMAEVGKPNLVDFFPILEKIDLQGIRRRAIIHFGKLFKLFDDLINERLEEKKRPGFMEKSDVLEIFLNITEKNPQEIDHNHIKSMFMDLFGAGTDTTTSTLEWAMAELLKQPEIIKKAQVELAEIIGKGKLIEEADVFRLPYLQCIIKETLRLHPPVPLLVPRKVDQDVELCDYIIPKGSQVLVNVWAIGRDFTFWKDPLEFKPERFLNLDLDMRGQDFELIPFGAGRRICPGLPLALRMIPVMLGSLLNSFNWKLDAGIEPQELDMEEKFGITLAKAHPLRAIPSPL*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="+" PGL_start="84587" PGL_stop="85035"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84587" e_stop="85035"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84587" e_stop="85035" e_length="449"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84587" stop="85035"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E294328" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GACCTATATCCAAAGCTTCACCTTGTTGACTACATTTGTCACAATAATCAATCAATTGTTTCACCTTTTGAGACCTTAGATGTTGATTTGCATCAAGCTTATTGGAAGATAAGAGGTTAGTGTTCAATATTCTTCGAAGCGTTCGCCATTGAGGACAAACAGGAAGCCATGCCACAGAAAATTTGTAATGGTTGTGCGCTTGAAGAGCATTAGGAGCAAATCTAGATGAAAAGGCTTGATCTTGAGTTTTAAGGACTTGTTTTGCAATGGTTGATGAGGAAATGACTATTGTTGTTATTTGACCTAACTTTAAACTCATAATTGGACCATAATTTTTTGCAAGATTGGCTAGTGATATATGAGGTTTTGCACCTAACAACTGAAGGTTTCCAATAATTGGCCATGGTGATGGACCTGGTGGAAGTTTTTTGCTTCCTTTGCTACATATT</gDNA_template>
            <first_frame> D  L  Y  P  K  L  H  L  V  D  Y  I  C  H  N  N  Q  S  I  V  S  P  F  E  T  L  D  V  D  L  H  Q  A  Y  W  K  I  R  G  *  C  S  I  F  F  E  A  F  A  I  E  D  K  Q  E  A  M  P  Q  K  I  C  N  G  C  A  L  E  E  H  *  E  Q  I  *  M  K  R  L  D  L  E  F  *  G  L  V  L  Q  W  L  M  R  K  *  L  L  L  L  F  D  L  T  L  N  S  *  L  D  H  N  F  L  Q  D  W  L  V  I  Y  E  V  L  H  L  T  T  E  G  F  Q  *  L  A  M  V  M  D  L  V  E  V  F  C  F  L  C  Y  I   </first_frame>
            <second_frame>  T  Y  I  Q  S  F  T  L  L  T  T  F  V  T  I  I  N  Q  L  F  H  L  L  R  P  *  M  L  I  C  I  K  L  I  G  R  *  E  V  S  V  Q  Y  S  S  K  R  S  P  L  R  T  N  R  K  P  C  H  R  K  F  V  M  V  V  R  L  K  S  I  R  S  K  S  R  *  K  G  L  I  L  S  F  K  D  L  F  C  N  G  *  *  G  N  D  Y  C  C  Y  L  T  *  L  *  T  H  N  W  T  I  I  F  C  K  I  G  *  *  Y  M  R  F  C  T  *  Q  L  K  V  S  N  N  W  P  W  *  W  T  W  W  K  F  F  A  S  F  A  T  Y  </second_frame>
            <third_frame>   P  I  S  K  A  S  P  C  *  L  H  L  S  Q  *  S  I  N  C  F  T  F  *  D  L  R  C  *  F  A  S  S  L  L  E  D  K  R  L  V  F  N  I  L  R  S  V  R  H  *  G  Q  T  G  S  H  A  T  E  N  L  *  W  L  C  A  *  R  A  L  G  A  N  L  D  E  K  A  *  S  *  V  L  R  T  C  F  A  M  V  D  E  E  M  T  I  V  V  I  *  P  N  F  K  L  I  I  G  P  *  F  F  A  R  L  A  S  D  I  *  G  F  A  P  N  N  *  R  F  P  I  I  G  H  G  D  G  P  G  G  S  F  L  L  P  L  L  H  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C09HBa0226D21.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="89388" PGL_stop="89106"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="89388" e_stop="89106"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.982">
            <gDNA_exon_boundary e_start="89388" e_stop="89106" e_length="283"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="89388" stop="89106"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309339" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGTGTGGGAAATTAATAGAGATTCTACTTTTTGGGAGGATCCCTTAGTGTTTAAACCTGAGAGGTTTTGGCATTCAAATTTAGACGTGCGAGGACAAGATTTTGAACTGATCCCATTTGGTGCGGGTAGAAGAATGTGCCCTGCCTTGCCACTTGCATTGCGAATGATTCCAGTCATGTTGGGCTCACTCTTGAATTCCTTCAATTGGAAACTCGAGGCAGGCATTAGACCAGAAGACCTAGACATGGAGGAGAAATTTGGTTTGGCTTTAGTCAAAGCTCA</gDNA_template>
            <first_frame> M  C  G  K  L  I  E  I  L  L  F  G  R  I  P  *  C  L  N  L  R  G  F  G  I  Q  I  *  T  C  E  D  K  I  L  N  *  S  H  L  V  R  V  E  E  C  A  L  P  C  H  L  H  C  E  *  F  Q  S  C  W  A  H  S  *  I  P  S  I  G  N  S  R  Q  A  L  D  Q  K  T  *  T  W  R  R  N  L  V  W  L  *  S  K  L  </first_frame>
            <second_frame>  C  V  G  N  *  *  R  F  Y  F  L  G  G  S  L  S  V  *  T  *  E  V  L  A  F  K  F  R  R  A  R  T  R  F  *  T  D  P  I  W  C  G  *  K  N  V  P  C  L  A  T  C  I  A  N  D  S  S  H  V  G  L  T  L  E  F  L  Q  L  E  T  R  G  R  H  *  T  R  R  P  R  H  G  G  E  I  W  F  G  F  S  Q  S  S </second_frame>
            <third_frame>   V  W  E  I  N  R  D  S  T  F  W  E  D  P  L  V  F  K  P  E  R  F  W  H  S  N  L  D  V  R  G  Q  D  F  E  L  I  P  F  G  A  G  R  R  M  C  P  A  L  P  L  A  L  R  M  I  P  V  M  L  G  S  L  L  N  S  F  N  W  K  L  E  A  G  I  R  P  E  D  L  D  M  E  E  K  F  G  L  A  L  V  K  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="89386" stop="89108"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VWEINRDSTFWEDPLVFKPERFWHSNLDVRGQDFELIPFGAGRRMCPALPLALRMIPVMLGSLLNSFNWKLEAGIRPEDLDMEEKFGLALVKA</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="102348" PGL_stop="102802"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="102348" e_stop="102802"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.936"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.936">
            <gDNA_exon_boundary e_start="102348" e_stop="102802" e_length="455"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="102348" stop="102802"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415948" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TACTCCATAGGTAAAAGTCTACAAACATAAACATGAACTTTATTATTTGAACCATAATTAAATGGCACTATAGTTTGAATTTTGAAACAGAGAAATATACTCTCTCAGTGCATATTATGCACAACACAAGAACAACAACTCAAGCAACTGCAACATCATGTAGCCTTCCATGCTGAAAGGGGCGGCGTTTCTGAATTTTTGAAAGTACTCATACCAGGTATATATCGATCACCCTGGACTGCGTTAGCTGAGGCAATGGATTCAAGTTCTGCCATGTCTTCTGATGTTAACTTTACAGACAGAGCTCCAATGTTCTGGTTGAAGTTTTCAATCTTAGTGGTGCCAGGGATGGGACACACGTCGTTTCCTTGGTGATGTACCCAAGCCAACGCTAGTTGAGAAGGAGTGCATCCCTTCTTAGCTGCCATTTGACAAATTCGCTCATACAGCTTTTT</gDNA_template>
            <first_frame> Y  S  I  G  K  S  L  Q  T  *  T  *  T  L  L  F  E  P  *  L  N  G  T  I  V  *  I  L  K  Q  R  N  I  L  S  Q  C  I  L  C  T  T  Q  E  Q  Q  L  K  Q  L  Q  H  H  V  A  F  H  A  E  R  G  G  V  S  E  F  L  K  V  L  I  P  G  I  Y  R  S  P  W  T  A  L  A  E  A  M  D  S  S  S  A  M  S  S  D  V  N  F  T  D  R  A  P  M  F  W  L  K  F  S  I  L  V  V  P  G  M  G  H  T  S  F  P  W  *  C  T  Q  A  N  A  S  *  E  G  V  H  P  F  L  A  A  I  *  Q  I  R  S  Y  S  F   </first_frame>
            <second_frame>  T  P  *  V  K  V  Y  K  H  K  H  E  L  Y  Y  L  N  H  N  *  M  A  L  *  F  E  F  *  N  R  E  I  Y  S  L  S  A  Y  Y  A  Q  H  K  N  N  N  S  S  N  C  N  I  M  *  P  S  M  L  K  G  A  A  F  L  N  F  *  K  Y  S  Y  Q  V  Y  I  D  H  P  G  L  R  *  L  R  Q  W  I  Q  V  L  P  C  L  L  M  L  T  L  Q  T  E  L  Q  C  S  G  *  S  F  Q  S  *  W  C  Q  G  W  D  T  R  R  F  L  G  D  V  P  K  P  T  L  V  E  K  E  C  I  P  S  *  L  P  F  D  K  F  A  H  T  A  F  </second_frame>
            <third_frame>   L  H  R  *  K  S  T  N  I  N  M  N  F  I  I  *  T  I  I  K  W  H  Y  S  L  N  F  E  T  E  K  Y  T  L  S  V  H  I  M  H  N  T  R  T  T  T  Q  A  T  A  T  S  C  S  L  P  C  *  K  G  R  R  F  *  I  F  E  S  T  H  T  R  Y  I  S  I  T  L  D  C  V  S  *  G  N  G  F  K  F  C  H  V  F  *  C  *  L  Y  R  Q  S  S  N  V  L  V  E  V  F  N  L  S  G  A  R  D  G  T  H  V  V  S  L  V  M  Y  P  S  Q  R  *  L  R  R  S  A  S  L  L  S  C  H  L  T  N  S  L  I  Q  L  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="+"/>
                <serials PGL_serial="20" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="102426" stop="102722"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>294</number_coding_nucleotides>
                  <number_encoded_amino_acids>98</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ILKQRNILSQCILCTTQEQQLKQLQHHVAFHAERGGVSEFLKVLIPGIYRSPWTALAEAMDSSSAMSSDVNFTDRAPMFWLKFSILVVPGMGHTSFPW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="105631" PGL_stop="102497"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105631" e_stop="105379"/>
            <exon e_start="104254" e_stop="104039"/>
            <exon e_start="103548" e_stop="103376"/>
            <exon e_start="103290" e_stop="103188"/>
            <exon e_start="102841" e_stop="102497"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.989" acc_prob="1.000" e_score="0.964"/>
          <exon-intron don_prob="0.996" acc_prob="0.994" e_score="0.988"/>
          <exon-intron don_prob="0.940" acc_prob="0.774" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.964">
            <gDNA_exon_boundary e_start="105631" e_stop="105379" e_length="253"/>
          </exon>
          <intron i_serial="1" don_prob="0.989" acc_prob="1.000">
            <gDNA_intron_boundary i_start="105378" i_stop="104255" i_length="1124"/>
          </intron>
          <exon e_serial="2" e_score="0.988">
            <gDNA_exon_boundary e_start="104254" e_stop="104039" e_length="216"/>
          </exon>
          <intron i_serial="2" don_prob="0.996" acc_prob="0.994">
            <gDNA_intron_boundary i_start="104038" i_stop="103549" i_length="490"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="103548" e_stop="103376" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.940" acc_prob="0.774">
            <gDNA_intron_boundary i_start="103375" i_stop="103291" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103290" e_stop="103188" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.982" acc_prob="0.992">
            <gDNA_intron_boundary i_start="103187" i_stop="102842" i_length="346"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="102841" e_stop="102497" e_length="345"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105631" stop="105379"/>
              <exon start="104254" stop="104156"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E365953" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105602" stop="105379"/>
              <exon start="104254" stop="104095"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E437995" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105602" stop="105379"/>
              <exon start="104254" stop="104142"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E415947" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="104209" stop="104039"/>
              <exon start="103548" stop="103376"/>
              <exon start="103290" stop="103188"/>
              <exon start="102841" stop="102497"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E317049" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGAGTGAAATAGGCTGAAAGGACAACAATGGCGACGGAAGGAACAAAAGTGGGAAGAATGAAGTTGGGTTCAGAGGGGCTTCAAGTATCTGTTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCGCCCAAACCCGAACCCGAAATGATCGAACTAATCCACCACGCCATTAACTCCGGCGTCACTCTTCTTGATAGCTCCGATGTATATGGGCCATACACCAACGAAATCCTCATTGGTAAA : GCTTTGAAGGGAGGGATGAGAGAACGGGTTGAATTAGCAACAAAGTTTGGTATTGTTTTAGGAGATGAAAAGAAAGCAGAAGGAAAGAGAGAAGTGCATGGAAATCCAGCCTATGTAAGGTCAGCGTGCGAGGCTAGTTTAAAGCGACTTGATGTTGACTGTATAGACTTGTACTATCAGCACCGAATTGATACACGTGTGCCCATTGAAGTCACG : GTTGGAGAACTTAAGAAGCTGGTCGAAGAAGGTAAAATAAAATATATAGGTCTATCCGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCTCTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG : AGAACTCGGAATTGGGATTGTGGCATACAGTCCACTAGGACGGGGCTTTTTGTCTTCCGGTCCAAAGCTGCTTGAGGATTTGTCAAATGAAGACTACCGAAAG : CATCTGCCAAGGTTCCAGGCGGAGAATCTTGAGCATAACAAAAAGCTGTATGAGCGAATTTGTCAAATGGCAGCTAAGAAGGGATGCACTCCTTCTCAACTAGCGTTGGCTTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCTGGCACCACTAAGATTGAAAACTTCAACCAGAACATTGGAGCTCTGTCTGTAAAGTTAACATCAGAAGACATGGCAGAACTTGAATCCATTGCCTCAGCTAACGCAGTCCAGGGTGATCGATATATACCTGGTATGAGTACTTTCAAAAATTCAGAAACGCCGCCCCTTTCAGCATGGAAGGCTACATGATGTTGC</gDNA_template>
            <first_frame> Q  S  E  I  G  *  K  D  N  N  G  D  G  R  N  K  S  G  K  N  E  V  G  F  R  G  A  S  S  I  C  S  R  T  W  L  Y  G  Y  V  R  F  L  R  A  A  Q  T  R  T  R  N  D  R  T  N  P  P  R  H  *  L  R  R  H  S  S  *  *  L  R  C  I  W  A  I  H  Q  R  N  P  H  W  *   : S  F  E  G  R  D  E  R  T  G  *  I  S  N  K  V  W  Y  C  F  R  R  *  K  E  S  R  R  K  E  R  S  A  W  K  S  S  L  C  K  V  S  V  R  G  *  F  K  A  T  *  C  *  L  Y  R  L  V  L  S  A  P  N  *  Y  T  C  A  H  *  S  H   : G  W  R  T  *  E  A  G  R  R  R  *  N  K  I  Y  R  S  I  R  G  F  S  I  N  N  *  K  S  T  C  C  S  S  N  N  S  S  T  I  R  M  V  S  M  V  E  R  C  R  G  R  N  N  P  Y  L  Q  :  R  T  R  N  W  D  C  G  I  Q  S  T  R  T  G  L  F  V  F  R  S  K  A  A  *  G  F  V  K  *  R  L  P  K   : A  S  A  K  V  P  G  G  E  S  *  A  *  Q  K  A  V  *  A  N  L  S  N  G  S  *  E  G  M  H  S  F  S  T  S  V  G  L  G  T  S  P  R  K  R  R  V  S  H  P  W  H  H  *  D  *  K  L  Q  P  E  H  W  S  S  V  C  K  V  N  I  R  R  H  G  R  T  *  I  H  C  L  S  *  R  S  P  G  *  S  I  Y  T  W  Y  E  Y  F  Q  K  F  R  N  A  A  P  F  S  M  E  G  Y  M  M  L  </first_frame>
            <second_frame>  R  V  K  *  A  E  R  T  T  M  A  T  E  G  T  K  V  G  R  M  K  L  G  S  E  G  L  Q  V  S  V  Q  G  L  G  C  M  G  M  S  A  F  Y  G  P  P  K  P  E  P  E  M  I  E  L  I  H  H  A  I  N  S  G  V  T  L  L  D  S  S  D  V  Y  G  P  Y  T  N  E  I  L  I  G  K  :  A  L  K  G  G  M  R  E  R  V  E  L  A  T  K  F  G  I  V  L  G  D  E  K  K  A  E  G  K  R  E  V  H  G  N  P  A  Y  V  R  S  A  C  E  A  S  L  K  R  L  D  V  D  C  I  D  L  Y  Y  Q  H  R  I  D  T  R  V  P  I  E  V  T  :  V  G  E  L  K  K  L  V  E  E  G  K  I  K  Y  I  G  L  S  E  A  S  A  S  T  I  R  R  A  H  A  V  H  P  I  T  A  V  Q  L  E  W  S  L  W  S  R  D  V  E  E  E  I  I  P  T  C  R :   E  L  G  I  G  I  V  A  Y  S  P  L  G  R  G  F  L  S  S  G  P  K  L  L  E  D  L  S  N  E  D  Y  R  K  :  H  L  P  R  F  Q  A  E  N  L  E  H  N  K  K  L  Y  E  R  I  C  Q  M  A  A  K  K  G  C  T  P  S  Q  L  A  L  A  W  V  H  H  Q  G  N  D  V  C  P  I  P  G  T  T  K  I  E  N  F  N  Q  N  I  G  A  L  S  V  K  L  T  S  E  D  M  A  E  L  E  S  I  A  S  A  N  A  V  Q  G  D  R  Y  I  P  G  M  S  T  F  K  N  S  E  T  P  P  L  S  A  W  K  A  T  *  C  C </second_frame>
            <third_frame>   E  *  N  R  L  K  G  Q  Q  W  R  R  K  E  Q  K  W  E  E  *  S  W  V  Q  R  G  F  K  Y  L  F  K  D  L  V  V  W  V  C  P  L  F  T  G  R  P  N  P  N  P  K  *  S  N  *  S  T  T  P  L  T  P  A  S  L  F  L  I  A  P  M  Y  M  G  H  T  P  T  K  S  S  L  V  K :   L  *  R  E  G  *  E  N  G  L  N  *  Q  Q  S  L  V  L  F  *  E  M  K  R  K  Q  K  E  R  E  K  C  M  E  I  Q  P  M  *  G  Q  R  A  R  L  V  *  S  D  L  M  L  T  V  *  T  C  T  I  S  T  E  L  I  H  V  C  P  L  K  S  R :   L  E  N  L  R  S  W  S  K  K  V  K  *  N  I  *  V  Y  P  R  L  Q  H  Q  Q  L  E  E  H  M  L  F  I  Q  *  Q  Q  Y  N  *  N  G  L  Y  G  R  E  M  *  R  K  K  *  S  L  L  A   : E  N  S  E  L  G  L  W  H  T  V  H  *  D  G  A  F  C  L  P  V  Q  S  C  L  R  I  C  Q  M  K  T  T  E  S :   I  C  Q  G  S  R  R  R  I  L  S  I  T  K  S  C  M  S  E  F  V  K  W  Q  L  R  R  D  A  L  L  L  N  *  R  W  L  G  Y  I  T  K  E  T  T  C  V  P  S  L  A  P  L  R  L  K  T  S  T  R  T  L  E  L  C  L  *  S  *  H  Q  K  T  W  Q  N  L  N  P  L  P  Q  L  T  Q  S  R  V  I  D  I  Y  L  V  *  V  L  S  K  I  Q  K  R  R  P  F  Q  H  G  R  L  H  D  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105618" stop="105379"/>
                    <exon start="104254" stop="104039"/>
                    <exon start="103548" stop="103376"/>
                    <exon start="103290" stop="103188"/>
                    <exon start="102841" stop="102503"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1068</number_coding_nucleotides>
                  <number_encoded_amino_acids>356</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AERTTMATEGTKVGRMKLGSEGLQVSVQGLGCMGMSAFYGPPKPEPEMIELIHHAINSGVTLLDSSDVYGPYTNEILIGKALKGGMRERVELATKFGIVLGDEKKAEGKREVHGNPAYVRSACEASLKRLDVDCIDLYYQHRIDTRVPIEVTVGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLLEDLSNEDYRKHLPRFQAENLEHNKKLYERICQMAAKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENFNQNIGALSVKLTSEDMAELESIASANAVQGDRYIPGMSTFKNSETPPLSAWKAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="112282" PGL_stop="105921"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="111699" e_stop="111463"/>
            <exon e_start="111364" e_stop="111164"/>
            <exon e_start="111048" e_stop="110876"/>
            <exon e_start="110784" e_stop="110682"/>
            <exon e_start="110585" e_stop="110115"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.685" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.923" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.916" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111699" e_stop="111463" e_length="237"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.987">
            <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="111364" e_stop="111164" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.685" acc_prob="0.987">
            <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="111048" e_stop="110876" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.923">
            <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="110784" e_stop="110682" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.916">
            <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="110585" e_stop="110115" e_length="471"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111699" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="110876"/>
              <exon start="110784" stop="110682"/>
              <exon start="110585" stop="110115"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E745325" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111691" stop="111476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111689" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="111044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111689" stop="111463"/>
              <exon start="111364" stop="111306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111688" stop="111463"/>
              <exon start="111364" stop="111187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111688" stop="111463"/>
              <exon start="111364" stop="111202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111682" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="110969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111681" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="110876"/>
              <exon start="110784" stop="110729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111675" stop="111463"/>
              <exon start="111364" stop="111173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200213" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111671" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="110878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310883" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110925" stop="110876"/>
              <exon start="110784" stop="110682"/>
              <exon start="110585" stop="110129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110900" stop="110876"/>
              <exon start="110784" stop="110682"/>
              <exon start="110585" stop="110129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110770" stop="110682"/>
              <exon start="110585" stop="110124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202661" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGAACGACAACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG : GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG : GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG : AGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAG : CATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGACTTTTTCCTATGGA</gDNA_template>
            <first_frame> *  T  T  T  M  T  K  E  G  K  N  V  K  R  I  K  L  G  S  E  G  L  E  V  S  V  Q  G  L  G  C  L  G  M  S  D  F  Y  G  P  P  K  P  E  P  D  M  I  E  L  I  H  H  A  I  N  S  G  I  T  F  F  D  T  S  N  S  Y  G  P  Y  T  N  E  I  L  L  G  K  :  A  L  K  G  G  M  R  E  R  V  E  L  A  T  K  F  G  I  H  F  A  D  G  K  I  E  V  R  G  E  P  E  Y  V  R  A  A  C  E  A  S  L  K  R  L  D  V  D  C  I  D  L  Y  Y  Q  H  R  I  D  T  R  V  P  I  E  V  T  :  V  G  E  L  K  K  L  V  E  E  G  K  I  K  Y  I  G  L  S  E  A  S  A  S  T  I  R  R  A  H  A  V  H  P  I  T  A  V  Q  L  E  W  S  L  W  S  R  D  V  E  E  E  I  I  P  T  C  R :   E  L  G  I  G  I  V  A  Y  S  P  L  G  R  G  F  L  S  S  G  P  K  L  V  E  D  L  T  N  E  D  F  R  K  :  H  L  P  R  F  Q  G  E  N  L  E  H  N  K  K  L  Y  E  R  I  C  E  L  A  T  K  K  G  C  T  P  S  Q  L  A  L  A  W  V  H  H  Q  G  N  D  V  C  P  I  P  G  T  T  K  I  E  N  F  N  Q  N  I  G  A  L  S  I  K  L  T  S  E  D  M  A  E  L  E  S  I  A  S  A  N  A  V  Q  G  D  R  Y  G  S  A  A  A  T  Y  K  D  S  E  T  P  P  I  S  A  W  K  A  T  *  I  *  S  C  S  C  V  V  H  C  M  *  *  G  F  F  F  P  V  S  K  L  L  C  H  L  L  M  V  Q  I  I  K  S  I  L  C  L  W  T  F  S  Y  G </first_frame>
            <second_frame>  E  R  Q  Q  *  R  K  R  E  R  M  *  K  E  S  N  W  V  Q  R  D  L  K  Y  L  F  K  D  L  V  V  W  V  C  P  I  S  T  V  R  P  N  P  N  P  I  *  L  N  *  Y  T  M  P  L  T  P  A  *  H  F  S  I  L  Q  I  V  M  G  L  T  L  M  K  S  S  L  A  R :   L  *  R  E  E  *  G  N  E  S  S  *  Q  Q  N  L  V  Y  I  L  Q  M  E  R  *  K  Y  V  E  S  Q  N  M  *  G  Q  H  A  R  L  A  *  S  D  L  M  L  I  A  *  T  C  T  T  S  T  G  L  I  H  A  C  P  L  K  *  R :   L  E  N  L  R  S  W  L  K  R  V  K  *  N  I  *  V  Y  Q  R  L  Q  H  Q  Q  L  E  E  H  T  L  F  I  Q  *  Q  Q  Y  N  *  N  G  H  Y  G  R  E  M  *  R  K  K  *  S  L  L  A   : E  N  S  E  L  G  L  *  H  T  V  H  *  A  G  A  F  C  H  P  V  Q  S  W  L  R  T  *  Q  M  K  I  S  E  S :   I  Y  R  G  F  R  A  R  I  L  S  I  T  K  N  C  T  R  G  F  V  N  W  Q  L  R  R  D  A  P  R  L  N  W  R  W  R  G  Y  I  T  K  E  T  T  C  V  P  S  R  A  P  L  R  L  K  I  S  I  R  T  L  E  L  C  P  *  S  *  H  Q  K  T  W  Q  S  L  N  L  L  L  Q  L  M  Q  S  R  V  I  G  T  V  R  L  Q  Q  P  T  K  I  Q  K  L  L  L  F  Q  H  G  R  L  H  K  Y  R  V  V  L  V  L  C  T  V  C  N  E  V  S  F  F  L  F  Q  N  Y  C  A  T  Y  *  W  F  K  *  *  N  Q  F  S  V  C  G  L  F  P  M   </second_frame>
            <third_frame>   N  D  N  N  D  E  R  G  K  E  C  E  K  N  Q  I  G  F  R  G  T  *  S  I  C  S  R  T  W  L  S  G  Y  V  R  F  L  R  S  A  Q  T  R  T  R  Y  D  *  T  N  T  P  C  H  *  L  R  H  N  I  F  R  Y  F  K  *  L  W  A  L  H  *  *  N  P  P  W  Q   : G  F  E  G  R  N  E  G  T  S  R  V  S  N  K  I  W  Y  T  F  C  R  W  K  D  R  S  T  W  R  A  R  I  C  K  G  S  M  R  G  *  L  K  A  T  *  C  *  L  H  R  L  V  L  P  A  P  D  *  Y  T  R  A  H  *  S  N   : G  W  R  T  *  E  A  G  *  R  G  *  N  K  I  Y  R  S  I  R  G  F  S  I  N  N  *  K  S  T  R  C  S  S  N  N  S  S  T  I  R  M  V  T  M  V  E  R  C  R  G  R  N  N  P  Y  L  Q  :  R  T  R  N  W  D  C  S  I  Q  S  T  R  P  G  L  F  V  I  R  S  K  A  G  *  G  L  D  K  *  R  F  P  K   : A  S  T  E  V  S  G  R  E  S  *  A  *  Q  K  I  V  R  E  D  L  *  I  G  N  *  E  G  M  H  P  V  S  T  G  V  G  V  G  T  S  P  R  K  R  R  V  S  H  P  G  H  H  *  D  *  K  F  Q  S  E  H  W  S  S  V  H  K  A  N  I  R  R  H  G  R  A  *  I  Y  C  F  S  *  C  S  P  G  *  *  V  R  F  G  C  S  N  L  Q  R  F  R  N  S  S  Y  F  S  M  E  G  Y  I  N  I  E  L  F  L  C  C  A  L  Y  V  M  R  F  L  F  S  C  F  K  T  I  V  P  L  T  D  G  S  N  N  K  I  N  S  L  F  V  D  F  F  L  W  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111696" stop="111463"/>
                    <exon start="111364" stop="111164"/>
                    <exon start="111048" stop="110876"/>
                    <exon start="110784" stop="110682"/>
                    <exon start="110585" stop="110247"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1047</number_coding_nucleotides>
                  <number_encoded_amino_acids>349</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TTTMTKEGKNVKRIKLGSEGLEVSVQGLGCLGMSDFYGPPKPEPDMIELIHHAINSGITFFDTSNSYGPYTNEILLGKALKGGMRERVELATKFGIHFADGKIEVRGEPEYVRAACEASLKRLDVDCIDLYYQHRIDTRVPIEVTVGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLVEDLTNEDFRKHLPRFQGENLEHNKKLYERICELATKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENFNQNIGALSIKLTSEDMAELESIASANAVQGDRYGSAAATYKDSETPPISAWKAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="111691" e_stop="111463"/>
            <exon e_start="111364" e_stop="111164"/>
            <exon e_start="111048" e_stop="110876"/>
            <exon e_start="110784" e_stop="110682"/>
            <exon e_start="110585" e_stop="110177"/>
            <exon e_start="106031" e_stop="105958"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="0.685" acc_prob="0.987" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.923" e_score="1.000"/>
          <exon-intron don_prob="0.985" acc_prob="0.916" e_score="0.883"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.902"/>
          <exon-only e_score="0.939"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111691" e_stop="111463" e_length="229"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.987">
            <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="111364" e_stop="111164" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.685" acc_prob="0.987">
            <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="111048" e_stop="110876" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.923">
            <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="0.883">
            <gDNA_exon_boundary e_start="110784" e_stop="110682" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.916">
            <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96"/>
          </intron>
          <exon e_serial="5" e_score="0.902">
            <gDNA_exon_boundary e_start="110585" e_stop="110177" e_length="409"/>
          </exon>
          <intron i_serial="5" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="110176" i_stop="106032" i_length="4145"/>
          </intron>
          <exon e_serial="6" e_score="0.939">
            <gDNA_exon_boundary e_start="106031" e_stop="105958" e_length="74"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111691" stop="111476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111689" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="111044"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E460195" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111689" stop="111463"/>
              <exon start="111364" stop="111306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111688" stop="111463"/>
              <exon start="111364" stop="111187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111688" stop="111463"/>
              <exon start="111364" stop="111202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111682" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="110969"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E281897" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111681" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="110876"/>
              <exon start="110784" stop="110729"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309060" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111675" stop="111463"/>
              <exon start="111364" stop="111173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200213" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111671" stop="111463"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="110878"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310883" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110985" stop="110876"/>
              <exon start="110784" stop="110682"/>
              <exon start="110585" stop="110177"/>
              <exon start="106031" stop="105958"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E416927" strand="-"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110772" stop="110682"/>
              <exon start="110585" stop="110177"/>
              <exon start="106031" stop="105966"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417344" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG : GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG : GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG : AGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAG : CATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGT : GCTACGTGCTGTTGTTTCAAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAAGTTTGCAC</gDNA_template>
            <first_frame> N  N  D  E  R  G  K  E  C  E  K  N  Q  I  G  F  R  G  T  *  S  I  C  S  R  T  W  L  S  G  Y  V  R  F  L  R  S  A  Q  T  R  T  R  Y  D  *  T  N  T  P  C  H  *  L  R  H  N  I  F  R  Y  F  K  *  L  W  A  L  H  *  *  N  P  P  W  Q   : G  F  E  G  R  N  E  G  T  S  R  V  S  N  K  I  W  Y  T  F  C  R  W  K  D  R  S  T  W  R  A  R  I  C  K  G  S  M  R  G  *  L  K  A  T  *  C  *  L  H  R  L  V  L  P  A  P  D  *  Y  T  R  A  H  *  S  N   : G  W  R  T  *  E  A  G  *  R  G  *  N  K  I  Y  R  S  I  R  G  F  S  I  N  N  *  K  S  T  R  C  S  S  N  N  S  S  T  I  R  M  V  T  M  V  E  R  C  R  G  R  N  N  P  Y  L  Q  :  R  T  R  N  W  D  C  S  I  Q  S  T  R  P  G  L  F  V  I  R  S  K  A  G  *  G  L  D  K  *  R  F  P  K   : A  S  T  E  V  S  G  R  E  S  *  A  *  Q  K  I  V  R  E  D  L  *  I  G  N  *  E  G  M  H  P  V  S  T  G  V  G  V  G  T  S  P  R  K  R  R  V  S  H  P  G  H  H  *  D  *  K  F  Q  S  E  H  W  S  S  V  H  K  A  N  I  R  R  H  G  R  A  *  I  Y  C  F  S  *  C  S  P  G  *  *  V  R  F  G  C  S  N  L  Q  R  F  R  N  S  S  Y  F  S  M  E  G  Y  I  N  I  E  L  F  L  C  C  A  L  Y  V  M  R  F  L  F  S  C  F  K  T  I  V :   L  R  A  V  V  S  N  N  K  L  C  L  Q  T  *  F  E  L  A  I  F  K  F  A  </first_frame>
            <second_frame>  T  M  T  K  E  G  K  N  V  K  R  I  K  L  G  S  E  G  L  E  V  S  V  Q  G  L  G  C  L  G  M  S  D  F  Y  G  P  P  K  P  E  P  D  M  I  E  L  I  H  H  A  I  N  S  G  I  T  F  F  D  T  S  N  S  Y  G  P  Y  T  N  E  I  L  L  G  K  :  A  L  K  G  G  M  R  E  R  V  E  L  A  T  K  F  G  I  H  F  A  D  G  K  I  E  V  R  G  E  P  E  Y  V  R  A  A  C  E  A  S  L  K  R  L  D  V  D  C  I  D  L  Y  Y  Q  H  R  I  D  T  R  V  P  I  E  V  T  :  V  G  E  L  K  K  L  V  E  E  G  K  I  K  Y  I  G  L  S  E  A  S  A  S  T  I  R  R  A  H  A  V  H  P  I  T  A  V  Q  L  E  W  S  L  W  S  R  D  V  E  E  E  I  I  P  T  C  R :   E  L  G  I  G  I  V  A  Y  S  P  L  G  R  G  F  L  S  S  G  P  K  L  V  E  D  L  T  N  E  D  F  R  K  :  H  L  P  R  F  Q  G  E  N  L  E  H  N  K  K  L  Y  E  R  I  C  E  L  A  T  K  K  G  C  T  P  S  Q  L  A  L  A  W  V  H  H  Q  G  N  D  V  C  P  I  P  G  T  T  K  I  E  N  F  N  Q  N  I  G  A  L  S  I  K  L  T  S  E  D  M  A  E  L  E  S  I  A  S  A  N  A  V  Q  G  D  R  Y  G  S  A  A  A  T  Y  K  D  S  E  T  P  P  I  S  A  W  K  A  T  *  I  *  S  C  S  C  V  V  H  C  M  *  *  G  F  F  F  P  V  S  K  L  L   : C  Y  V  L  L  F  Q  I  I  N  Y  V  S  K  H  N  L  N  L  Q  F  L  S  L  H </second_frame>
            <third_frame>   Q  *  R  K  R  E  R  M  *  K  E  S  N  W  V  Q  R  D  L  K  Y  L  F  K  D  L  V  V  W  V  C  P  I  S  T  V  R  P  N  P  N  P  I  *  L  N  *  Y  T  M  P  L  T  P  A  *  H  F  S  I  L  Q  I  V  M  G  L  T  L  M  K  S  S  L  A  R :   L  *  R  E  E  *  G  N  E  S  S  *  Q  Q  N  L  V  Y  I  L  Q  M  E  R  *  K  Y  V  E  S  Q  N  M  *  G  Q  H  A  R  L  A  *  S  D  L  M  L  I  A  *  T  C  T  T  S  T  G  L  I  H  A  C  P  L  K  *  R :   L  E  N  L  R  S  W  L  K  R  V  K  *  N  I  *  V  Y  Q  R  L  Q  H  Q  Q  L  E  E  H  T  L  F  I  Q  *  Q  Q  Y  N  *  N  G  H  Y  G  R  E  M  *  R  K  K  *  S  L  L  A   : E  N  S  E  L  G  L  *  H  T  V  H  *  A  G  A  F  C  H  P  V  Q  S  W  L  R  T  *  Q  M  K  I  S  E  S :   I  Y  R  G  F  R  A  R  I  L  S  I  T  K  N  C  T  R  G  F  V  N  W  Q  L  R  R  D  A  P  R  L  N  W  R  W  R  G  Y  I  T  K  E  T  T  C  V  P  S  R  A  P  L  R  L  K  I  S  I  R  T  L  E  L  C  P  *  S  *  H  Q  K  T  W  Q  S  L  N  L  L  L  Q  L  M  Q  S  R  V  I  G  T  V  R  L  Q  Q  P  T  K  I  Q  K  L  L  L  F  Q  H  G  R  L  H  K  Y  R  V  V  L  V  L  C  T  V  C  N  E  V  S  F  F  L  F  Q  N  Y  C  :  A  T  C  C  C  F  K  *  *  I  M  S  P  N  I  I  *  T  C  N  F  *  V  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111690" stop="111463"/>
                    <exon start="111364" stop="111164"/>
                    <exon start="111048" stop="110876"/>
                    <exon start="110784" stop="110682"/>
                    <exon start="110585" stop="110247"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1041</number_coding_nucleotides>
                  <number_encoded_amino_acids>347</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMTKEGKNVKRIKLGSEGLEVSVQGLGCLGMSDFYGPPKPEPDMIELIHHAINSGITFFDTSNSYGPYTNEILLGKALKGGMRERVELATKFGIHFADGKIEVRGEPEYVRAACEASLKRLDVDCIDLYYQHRIDTRVPIEVTVGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLVEDLTNEDFRKHLPRFQGENLEHNKKLYERICELATKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENFNQNIGALSIKLTSEDMAELESIASANAVQGDRYGSAAATYKDSETPPISAWKAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="3">
          <exon_coordinates>
            <exon e_start="109498" e_stop="109250"/>
            <exon e_start="107659" e_stop="107459"/>
            <exon e_start="106853" e_stop="106681"/>
            <exon e_start="106595" e_stop="106493"/>
            <exon e_start="106376" e_stop="105921"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.969" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.440" e_score="1.000"/>
          <exon-intron don_prob="0.986" acc_prob="0.997" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="109498" e_stop="109250" e_length="249"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="1.000">
            <gDNA_intron_boundary i_start="109249" i_stop="107660" i_length="1590"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107659" e_stop="107459" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.969" acc_prob="0.995">
            <gDNA_intron_boundary i_start="107458" i_stop="106854" i_length="605"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="106853" e_stop="106681" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.440">
            <gDNA_intron_boundary i_start="106680" i_stop="106596" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="106595" e_stop="106493" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.986" acc_prob="0.997">
            <gDNA_intron_boundary i_start="106492" i_stop="106377" i_length="116"/>
          </intron>
          <exon e_serial="5" e_score="0.989">
            <gDNA_exon_boundary e_start="106376" e_stop="105921" e_length="456"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109498" stop="109250"/>
              <exon start="107659" stop="107459"/>
              <exon start="106853" stop="106686"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E689549" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109479" stop="109250"/>
              <exon start="107659" stop="107459"/>
              <exon start="106853" stop="106681"/>
              <exon start="106595" stop="106493"/>
              <exon start="106376" stop="106325"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E548993" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109479" stop="109250"/>
              <exon start="107659" stop="107459"/>
              <exon start="106853" stop="106681"/>
              <exon start="106595" stop="106523"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E482821" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109478" stop="109250"/>
              <exon start="107659" stop="107459"/>
              <exon start="106853" stop="106721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E306804" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109373" stop="109250"/>
              <exon start="107659" stop="107459"/>
              <exon start="106853" stop="106681"/>
              <exon start="106595" stop="106545"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E417343" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="109368" stop="109250"/>
              <exon start="107659" stop="107517"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E445992" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107658" stop="107459"/>
              <exon start="106853" stop="106681"/>
              <exon start="106595" stop="106493"/>
              <exon start="106376" stop="105940"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E734377" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="107556" stop="107459"/>
              <exon start="106853" stop="106681"/>
              <exon start="106595" stop="106493"/>
              <exon start="106376" stop="105932"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E693389" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="106535" stop="106493"/>
              <exon start="106376" stop="105921"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E544138" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="3" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTAAGCTTAAGCTGAATCACAACAATGGCGGCAGAGGGAACAAAAGTGGGAAGAATCAAATTGGGTTCAGAGGGTCTTGAAGTATCTGCTCAAGGACTTGGTTGTATGGGTATGTCCGCTTTTTACGGGCCTCCCAAACCCGATTCCGATATGGTCCAACTCATCCACCACGCCATTAACTCCGGCGTCACATTTCTCGATACTTCCGATGTATATGGGCCCCACACTAATGAAATCCTCCTCGGCAAG : GCTCTGATGGGCGGGATGAGGGAACGAGTTGAGTTAGCAACAAAATTTGCTGTAAGTTTTGCAGAAGGAAAAATGCAAGTGCGCGGAGAGCCAGCCTATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGACTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG : GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATTAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACATGCAGTTCATCCAATAACAGCGGTTCAATTAGAATGGTCTCTATGGTCAAGAGATGTAGAGGAAGACATAGTCCCTACTTGCAG : AGAACTTGGAATCGGGATTGTAGCATACAGTCCACTAGGGCGTGGCTTTTTATCATCCGGTCCAAAGCTGCTTGAGGACTGCTCAAATGAAGATTTCCGAAAG : TATCTACCGAGGTTCCAGGGCGAGAATCTTGAGCACAACAAAAAACTGTATGAGAGGATTTGTCAAATTGCAGCTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATTCCTGGCACCACTAAGATTGAAAACTTAAACCAGAACATTGGAGCTCTGTCCATAAAGCTTACTTCTGAAGACATGACAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCGGCAACCTACAAAGATTCAGAAACTCCACCCCTTTCAGCATGGAAGGCTACATAAATATAGGCTACGTGCTGTTGTTTCAAATAATAAATTATGTCTCCAAACATAATTTGAACTTGCAATTTTTAAGTTTGCACGCTTACCGTCCAATCAATCCCTCTTATCCAACAACTT</gDNA_template>
            <first_frame> V  S  L  S  *  I  T  T  M  A  A  E  G  T  K  V  G  R  I  K  L  G  S  E  G  L  E  V  S  A  Q  G  L  G  C  M  G  M  S  A  F  Y  G  P  P  K  P  D  S  D  M  V  Q  L  I  H  H  A  I  N  S  G  V  T  F  L  D  T  S  D  V  Y  G  P  H  T  N  E  I  L  L  G  K  :  A  L  M  G  G  M  R  E  R  V  E  L  A  T  K  F  A  V  S  F  A  E  G  K  M  Q  V  R  G  E  P  A  Y  V  R  A  A  C  E  A  S  L  K  R  L  D  V  D  C  I  D  L  Y  Y  Q  H  R  I  D  T  R  V  P  I  E  V  T  :  V  G  E  L  K  K  L  V  E  E  G  K  I  K  Y  I  G  L  S  E  A  S  A  S  T  I  R  R  A  H  A  V  H  P  I  T  A  V  Q  L  E  W  S  L  W  S  R  D  V  E  E  D  I  V  P  T  C  R :   E  L  G  I  G  I  V  A  Y  S  P  L  G  R  G  F  L  S  S  G  P  K  L  L  E  D  C  S  N  E  D  F  R  K  :  Y  L  P  R  F  Q  G  E  N  L  E  H  N  K  K  L  Y  E  R  I  C  Q  I  A  A  K  K  G  C  T  P  S  Q  L  A  L  A  W  V  H  H  Q  G  N  D  V  C  P  I  P  G  T  T  K  I  E  N  L  N  Q  N  I  G  A  L  S  I  K  L  T  S  E  D  M  T  E  L  E  S  I  A  S  A  N  A  V  Q  G  D  R  Y  G  S  A  A  A  T  Y  K  D  S  E  T  P  P  L  S  A  W  K  A  T  *  I  *  A  T  C  C  C  F  K  *  *  I  M  S  P  N  I  I  *  T  C  N  F  *  V  C  T  L  T  V  Q  S  I  P  L  I  Q  Q  L </first_frame>
            <second_frame>  *  A  *  A  E  S  Q  Q  W  R  Q  R  E  Q  K  W  E  E  S  N  W  V  Q  R  V  L  K  Y  L  L  K  D  L  V  V  W  V  C  P  L  F  T  G  L  P  N  P  I  P  I  W  S  N  S  S  T  T  P  L  T  P  A  S  H  F  S  I  L  P  M  Y  M  G  P  T  L  M  K  S  S  S  A  R :   L  *  W  A  G  *  G  N  E  L  S  *  Q  Q  N  L  L  *  V  L  Q  K  E  K  C  K  C  A  E  S  Q  P  M  *  G  Q  H  A  R  L  A  *  S  D  L  M  L  T  A  *  T  C  T  T  S  T  G  L  I  H  A  C  P  L  K  *  R :   L  E  N  L  R  S  W  L  K  R  V  K  L  N  I  *  V  Y  Q  R  L  Q  H  Q  Q  L  E  E  H  M  Q  F  I  Q  *  Q  R  F  N  *  N  G  L  Y  G  Q  E  M  *  R  K  T  *  S  L  L  A   : E  N  L  E  S  G  L  *  H  T  V  H  *  G  V  A  F  Y  H  P  V  Q  S  C  L  R  T  A  Q  M  K  I  S  E  S :   I  Y  R  G  S  R  A  R  I  L  S  T  T  K  N  C  M  R  G  F  V  K  L  Q  L  R  R  D  A  P  R  L  N  W  R  W  R  G  Y  I  T  K  E  T  T  C  V  P  F  L  A  P  L  R  L  K  T  *  T  R  T  L  E  L  C  P  *  S  L  L  L  K  T  *  Q  S  L  N  L  L  L  Q  L  M  Q  S  R  V  I  G  T  V  R  L  R  Q  P  T  K  I  Q  K  L  H  P  F  Q  H  G  R  L  H  K  Y  R  L  R  A  V  V  S  N  N  K  L  C  L  Q  T  *  F  E  L  A  I  F  K  F  A  R  L  P  S  N  Q  S  L  L  S  N  N   </second_frame>
            <third_frame>   K  L  K  L  N  H  N  N  G  G  R  G  N  K  S  G  K  N  Q  I  G  F  R  G  S  *  S  I  C  S  R  T  W  L  Y  G  Y  V  R  F  L  R  A  S  Q  T  R  F  R  Y  G  P  T  H  P  P  R  H  *  L  R  R  H  I  S  R  Y  F  R  C  I  W  A  P  H  *  *  N  P  P  R  Q   : G  S  D  G  R  D  E  G  T  S  *  V  S  N  K  I  C  C  K  F  C  R  R  K  N  A  S  A  R  R  A  S  L  C  K  G  S  M  R  G  *  L  K  A  T  *  C  *  L  H  R  L  V  L  P  A  P  D  *  Y  T  R  A  H  *  S  N   : G  W  R  T  *  E  A  G  *  R  G  *  N  *  I  Y  R  S  I  R  G  F  S  I  N  N  *  K  S  T  C  S  S  S  N  N  S  G  S  I  R  M  V  S  M  V  K  R  C  R  G  R  H  S  P  Y  L  Q  :  R  T  W  N  R  D  C  S  I  Q  S  T  R  A  W  L  F  I  I  R  S  K  A  A  *  G  L  L  K  *  R  F  P  K   : V  S  T  E  V  P  G  R  E  S  *  A  Q  Q  K  T  V  *  E  D  L  S  N  C  S  *  E  G  M  H  P  V  S  T  G  V  G  V  G  T  S  P  R  K  R  R  V  S  H  S  W  H  H  *  D  *  K  L  K  P  E  H  W  S  S  V  H  K  A  Y  F  *  R  H  D  R  A  *  I  Y  C  F  S  *  C  S  P  G  *  *  V  R  F  G  C  G  N  L  Q  R  F  R  N  S  T  P  F  S  M  E  G  Y  I  N  I  G  Y  V  L  L  F  Q  I  I  N  Y  V  S  K  H  N  L  N  L  Q  F  L  S  L  H  A  Y  R  P  I  N  P  S  Y  P  T  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="3" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="109483" stop="109250"/>
                    <exon start="107659" stop="107459"/>
                    <exon start="106853" stop="106681"/>
                    <exon start="106595" stop="106493"/>
                    <exon start="106376" stop="106038"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1047</number_coding_nucleotides>
                  <number_encoded_amino_acids>349</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITTMAAEGTKVGRIKLGSEGLEVSAQGLGCMGMSAFYGPPKPDSDMVQLIHHAINSGVTFLDTSDVYGPHTNEILLGKALMGGMRERVELATKFAVSFAEGKMQVRGEPAYVRAACEASLKRLDVDCIDLYYQHRIDTRVPIEVTVGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEDIVPTCRELGIGIVAYSPLGRGFLSSGPKLLEDCSNEDFRKYLPRFQGENLEHNKKLYERICQIAAKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENLNQNIGALSIKLTSEDMTELESIASANAVQGDRYGSAAATYKDSETPPLSAWKAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="4">
          <exon_coordinates>
            <exon e_start="111691" e_stop="111463"/>
            <exon e_start="111364" e_stop="111038"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.995" acc_prob="0.987" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111691" e_stop="111463" e_length="229"/>
          </exon>
          <intron i_serial="1" don_prob="0.995" acc_prob="0.987">
            <gDNA_intron_boundary i_start="111462" i_stop="111365" i_length="98"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="111364" e_stop="111038" e_length="327"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111691" stop="111476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310889" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111689" stop="111463"/>
              <exon start="111364" stop="111306"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E436155" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111688" stop="111463"/>
              <exon start="111364" stop="111187"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E337480" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111688" stop="111463"/>
              <exon start="111364" stop="111202"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E201962" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111681" stop="111463"/>
              <exon start="111364" stop="111038"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E339709" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111675" stop="111463"/>
              <exon start="111364" stop="111173"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E200213" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="4" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAG : GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACGGTTGGTTTCTCTGTTTCCATTGATAACTCTTGTCAAATCTTTACGAACACTCAATGCTGCATAAAAAATTACACTATCAGCATGTTTTATTACTGTGCAATTCTTGATCTACTAGGTTGGAGAACT</gDNA_template>
            <first_frame> N  N  D  E  R  G  K  E  C  E  K  N  Q  I  G  F  R  G  T  *  S  I  C  S  R  T  W  L  S  G  Y  V  R  F  L  R  S  A  Q  T  R  T  R  Y  D  *  T  N  T  P  C  H  *  L  R  H  N  I  F  R  Y  F  K  *  L  W  A  L  H  *  *  N  P  P  W  Q   : G  F  E  G  R  N  E  G  T  S  R  V  S  N  K  I  W  Y  T  F  C  R  W  K  D  R  S  T  W  R  A  R  I  C  K  G  S  M  R  G  *  L  K  A  T  *  C  *  L  H  R  L  V  L  P  A  P  D  *  Y  T  R  A  H  *  S  N  G  W  F  L  C  F  H  *  *  L  L  S  N  L  Y  E  H  S  M  L  H  K  K  L  H  Y  Q  H  V  L  L  L  C  N  S  *  S  T  R  L  E  N  </first_frame>
            <second_frame>  T  M  T  K  E  G  K  N  V  K  R  I  K  L  G  S  E  G  L  E  V  S  V  Q  G  L  G  C  L  G  M  S  D  F  Y  G  P  P  K  P  E  P  D  M  I  E  L  I  H  H  A  I  N  S  G  I  T  F  F  D  T  S  N  S  Y  G  P  Y  T  N  E  I  L  L  G  K  :  A  L  K  G  G  M  R  E  R  V  E  L  A  T  K  F  G  I  H  F  A  D  G  K  I  E  V  R  G  E  P  E  Y  V  R  A  A  C  E  A  S  L  K  R  L  D  V  D  C  I  D  L  Y  Y  Q  H  R  I  D  T  R  V  P  I  E  V  T  V  G  F  S  V  S  I  D  N  S  C  Q  I  F  T  N  T  Q  C  C  I  K  N  Y  T  I  S  M  F  Y  Y  C  A  I  L  D  L  L  G  W  R  T </second_frame>
            <third_frame>   Q  *  R  K  R  E  R  M  *  K  E  S  N  W  V  Q  R  D  L  K  Y  L  F  K  D  L  V  V  W  V  C  P  I  S  T  V  R  P  N  P  N  P  I  *  L  N  *  Y  T  M  P  L  T  P  A  *  H  F  S  I  L  Q  I  V  M  G  L  T  L  M  K  S  S  L  A  R :   L  *  R  E  E  *  G  N  E  S  S  *  Q  Q  N  L  V  Y  I  L  Q  M  E  R  *  K  Y  V  E  S  Q  N  M  *  G  Q  H  A  R  L  A  *  S  D  L  M  L  I  A  *  T  C  T  T  S  T  G  L  I  H  A  C  P  L  K  *  R  L  V  S  L  F  P  L  I  T  L  V  K  S  L  R  T  L  N  A  A  *  K  I  T  L  S  A  C  F  I  T  V  Q  F  L  I  Y  *  V  G  E   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="4" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111690" stop="111463"/>
                    <exon start="111364" stop="111038"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>555</number_coding_nucleotides>
                  <number_encoded_amino_acids>185</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMTKEGKNVKRIKLGSEGLEVSVQGLGCLGMSDFYGPPKPEPDMIELIHHAINSGITFFDTSNSYGPYTNEILLGKALKGGMRERVELATKFGIHFADGKIEVRGEPEYVRAACEASLKRLDVDCIDLYYQHRIDTRVPIEVTVGFSVSIDNSCQIFTNTQCCIKNYTISMFYYCAILDLLGWRT</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="5">
          <exon_coordinates>
            <exon e_start="112282" e_stop="112063"/>
            <exon e_start="111364" e_stop="111164"/>
            <exon e_start="111048" e_stop="110876"/>
            <exon e_start="110784" e_stop="110682"/>
            <exon e_start="110585" e_stop="110124"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.987" e_score="0.959"/>
          <exon-intron don_prob="0.685" acc_prob="0.987" e_score="0.965"/>
          <exon-intron don_prob="1.000" acc_prob="0.923" e_score="0.971"/>
          <exon-intron don_prob="0.985" acc_prob="0.916" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.959">
            <gDNA_exon_boundary e_start="112282" e_stop="112063" e_length="220"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.987">
            <gDNA_intron_boundary i_start="112062" i_stop="111365" i_length="698"/>
          </intron>
          <exon e_serial="2" e_score="0.965">
            <gDNA_exon_boundary e_start="111364" e_stop="111164" e_length="201"/>
          </exon>
          <intron i_serial="2" don_prob="0.685" acc_prob="0.987">
            <gDNA_intron_boundary i_start="111163" i_stop="111049" i_length="115"/>
          </intron>
          <exon e_serial="3" e_score="0.971">
            <gDNA_exon_boundary e_start="111048" e_stop="110876" e_length="173"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.923">
            <gDNA_intron_boundary i_start="110875" i_stop="110785" i_length="91"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="110784" e_stop="110682" e_length="103"/>
          </exon>
          <intron i_serial="4" don_prob="0.985" acc_prob="0.916">
            <gDNA_intron_boundary i_start="110681" i_stop="110586" i_length="96"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="110585" e_stop="110124" e_length="462"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="112282" stop="112063"/>
              <exon start="111364" stop="111164"/>
              <exon start="111048" stop="110876"/>
              <exon start="110784" stop="110682"/>
              <exon start="110585" stop="110548"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E465941" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110925" stop="110876"/>
              <exon start="110784" stop="110682"/>
              <exon start="110585" stop="110129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E350332" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110900" stop="110876"/>
              <exon start="110784" stop="110682"/>
              <exon start="110585" stop="110129"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309061" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="110770" stop="110682"/>
              <exon start="110585" stop="110124"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E202661" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="5" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAGAGGGAAAAAATGTGAGAAGAATCAAATTAGGTTCAGAAGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTATGGGTATGTCCGCTTATTACGGGTCGCCCAAACCCGAACCCGATATGATCCAACTCATTCACCATGCCGTTAACTCTGGCGTTACATTTCTCGATACTTCCAACAGTTATGGGCCACACACTAACGAAATCCTCCTTGGTAAG : GCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATGTAAGGGCAGCATGCGAGGCTAGCTTAAAGCGACTTGATGTTGATTGCATAGACTTGTACTACCAGCACCGGATTGATACACGCGTGCCCATTGAAGTAACG : GTTGGAGAACTTAAGAAGCTGGTTGAAGAGGGTAAAATAAAATATATAGGTCTATCAGAGGCTTCAGCATCAACAATTAGAAGAGCACACGCTGTTCATCCAATAACAGCAGTACAATTAGAATGGTCACTATGGTCGAGAGATGTAGAGGAAGAAATAATCCCTACTTGCAG : AGAACTCGGAATTGGGATTGTAGCATACAGTCCACTAGGCCGGGGCTTTTTGTCATCCGGTCCAAAGCTGGTTGAGGACTTGACAAATGAAGATTTCCGAAAG : CATCTACCGAGGTTTCAGGGCGAGAATCTTGAGCATAACAAAAAATTGTACGAGAGGATTTGTGAATTGGCAACTAAGAAGGGATGCACCCCGTCTCAACTGGCGTTGGCGTGGGTACATCACCAAGGAAACGACGTGTGTCCCATCCCGGGCACCACTAAGATTGAAAATTTCAATCAGAACATTGGAGCTCTGTCCATAAAGCTAACATCAGAAGACATGGCAGAGCTTGAATCTATTGCTTCAGCTAATGCAGTCCAGGGTGATAGGTACGGTTCGGCTGCAGCAACCTACAAAGATTCAGAAACTCCTCCTATTTCAGCATGGAAGGCTACATAAATATAGAGTTGTTCTTGTGTTGTGCACTGTATGTAATGAGGTTTCTTTTTTCCTGTTTCAAAACTATTGTGCCACTTACTGATGGTTCAAATAATAAAATCAATTCTCTGTTTGTGGACTTTT</gDNA_template>
            <first_frame> E  R  G  K  K  C  E  K  N  Q  I  R  F  R  R  T  *  S  I  C  S  R  T  W  L  Y  G  Y  V  R  L  L  R  V  A  Q  T  R  T  R  Y  D  P  T  H  S  P  C  R  *  L  W  R  Y  I  S  R  Y  F  Q  Q  L  W  A  T  H  *  R  N  P  P  W  *   : G  F  E  G  R  N  E  G  T  S  R  V  S  N  K  I  W  Y  T  F  C  R  W  K  D  R  S  T  W  R  A  R  I  C  K  G  S  M  R  G  *  L  K  A  T  *  C  *  L  H  R  L  V  L  P  A  P  D  *  Y  T  R  A  H  *  S  N   : G  W  R  T  *  E  A  G  *  R  G  *  N  K  I  Y  R  S  I  R  G  F  S  I  N  N  *  K  S  T  R  C  S  S  N  N  S  S  T  I  R  M  V  T  M  V  E  R  C  R  G  R  N  N  P  Y  L  Q  :  R  T  R  N  W  D  C  S  I  Q  S  T  R  P  G  L  F  V  I  R  S  K  A  G  *  G  L  D  K  *  R  F  P  K   : A  S  T  E  V  S  G  R  E  S  *  A  *  Q  K  I  V  R  E  D  L  *  I  G  N  *  E  G  M  H  P  V  S  T  G  V  G  V  G  T  S  P  R  K  R  R  V  S  H  P  G  H  H  *  D  *  K  F  Q  S  E  H  W  S  S  V  H  K  A  N  I  R  R  H  G  R  A  *  I  Y  C  F  S  *  C  S  P  G  *  *  V  R  F  G  C  S  N  L  Q  R  F  R  N  S  S  Y  F  S  M  E  G  Y  I  N  I  E  L  F  L  C  C  A  L  Y  V  M  R  F  L  F  S  C  F  K  T  I  V  P  L  T  D  G  S  N  N  K  I  N  S  L  F  V  D  F  </first_frame>
            <second_frame>  K  E  G  K  N  V  R  R  I  K  L  G  S  E  G  L  E  V  S  V  Q  G  L  G  C  M  G  M  S  A  Y  Y  G  S  P  K  P  E  P  D  M  I  Q  L  I  H  H  A  V  N  S  G  V  T  F  L  D  T  S  N  S  Y  G  P  H  T  N  E  I  L  L  G  K  :  A  L  K  G  G  M  R  E  R  V  E  L  A  T  K  F  G  I  H  F  A  D  G  K  I  E  V  R  G  E  P  E  Y  V  R  A  A  C  E  A  S  L  K  R  L  D  V  D  C  I  D  L  Y  Y  Q  H  R  I  D  T  R  V  P  I  E  V  T  :  V  G  E  L  K  K  L  V  E  E  G  K  I  K  Y  I  G  L  S  E  A  S  A  S  T  I  R  R  A  H  A  V  H  P  I  T  A  V  Q  L  E  W  S  L  W  S  R  D  V  E  E  E  I  I  P  T  C  R :   E  L  G  I  G  I  V  A  Y  S  P  L  G  R  G  F  L  S  S  G  P  K  L  V  E  D  L  T  N  E  D  F  R  K  :  H  L  P  R  F  Q  G  E  N  L  E  H  N  K  K  L  Y  E  R  I  C  E  L  A  T  K  K  G  C  T  P  S  Q  L  A  L  A  W  V  H  H  Q  G  N  D  V  C  P  I  P  G  T  T  K  I  E  N  F  N  Q  N  I  G  A  L  S  I  K  L  T  S  E  D  M  A  E  L  E  S  I  A  S  A  N  A  V  Q  G  D  R  Y  G  S  A  A  A  T  Y  K  D  S  E  T  P  P  I  S  A  W  K  A  T  *  I  *  S  C  S  C  V  V  H  C  M  *  *  G  F  F  F  P  V  S  K  L  L  C  H  L  L  M  V  Q  I  I  K  S  I  L  C  L  W  T  F </second_frame>
            <third_frame>   K  R  E  K  M  *  E  E  S  N  *  V  Q  K  D  L  K  Y  L  F  K  D  L  V  V  W  V  C  P  L  I  T  G  R  P  N  P  N  P  I  *  S  N  S  F  T  M  P  L  T  L  A  L  H  F  S  I  L  P  T  V  M  G  H  T  L  T  K  S  S  L  V  R :   L  *  R  E  E  *  G  N  E  S  S  *  Q  Q  N  L  V  Y  I  L  Q  M  E  R  *  K  Y  V  E  S  Q  N  M  *  G  Q  H  A  R  L  A  *  S  D  L  M  L  I  A  *  T  C  T  T  S  T  G  L  I  H  A  C  P  L  K  *  R :   L  E  N  L  R  S  W  L  K  R  V  K  *  N  I  *  V  Y  Q  R  L  Q  H  Q  Q  L  E  E  H  T  L  F  I  Q  *  Q  Q  Y  N  *  N  G  H  Y  G  R  E  M  *  R  K  K  *  S  L  L  A   : E  N  S  E  L  G  L  *  H  T  V  H  *  A  G  A  F  C  H  P  V  Q  S  W  L  R  T  *  Q  M  K  I  S  E  S :   I  Y  R  G  F  R  A  R  I  L  S  I  T  K  N  C  T  R  G  F  V  N  W  Q  L  R  R  D  A  P  R  L  N  W  R  W  R  G  Y  I  T  K  E  T  T  C  V  P  S  R  A  P  L  R  L  K  I  S  I  R  T  L  E  L  C  P  *  S  *  H  Q  K  T  W  Q  S  L  N  L  L  L  Q  L  M  Q  S  R  V  I  G  T  V  R  L  Q  Q  P  T  K  I  Q  K  L  L  L  F  Q  H  G  R  L  H  K  Y  R  V  V  L  V  L  C  T  V  C  N  E  V  S  F  F  L  F  Q  N  Y  C  A  T  Y  *  W  F  K  *  *  N  Q  F  S  V  C  G  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="5" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="112281" stop="112063"/>
                    <exon start="111364" stop="111164"/>
                    <exon start="111048" stop="110876"/>
                    <exon start="110784" stop="110682"/>
                    <exon start="110585" stop="110247"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1032</number_coding_nucleotides>
                  <number_encoded_amino_acids>344</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KEGKNVRRIKLGSEGLEVSVQGLGCMGMSAYYGSPKPEPDMIQLIHHAVNSGVTFLDTSNSYGPHTNEILLGKALKGGMRERVELATKFGIHFADGKIEVRGEPEYVRAACEASLKRLDVDCIDLYYQHRIDTRVPIEVTVGELKKLVEEGKIKYIGLSEASASTIRRAHAVHPITAVQLEWSLWSRDVEEEIIPTCRELGIGIVAYSPLGRGFLSSGPKLVEDLTNEDFRKHLPRFQGENLEHNKKLYERICELATKKGCTPSQLALAWVHHQGNDVCPIPGTTKIENFNQNIGALSIKLTSEDMAELESIASANAVQGDRYGSAAATYKDSETPPISAWKAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="6">
          <exon_coordinates>
            <exon e_start="111691" e_stop="111265"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="111691" e_stop="111265" e_length="427"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111691" stop="111265"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E309922" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="111691" stop="111476"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E310889" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="6" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAATGACGAAAGAGGGAAAGAATGTGAAAAGAATCAAATTGGGTTCAGAGGGACTTGAAGTATCTGTTCAAGGACTTGGTTGTCTGGGTATGTCCGATTTCTACGGTCCGCCCAAACCCGAACCCGATATGATTGAACTAATACACCATGCCATTAACTCCGGCATAACATTTTTCGATACTTCAAATAGTTATGGGCCTTACACTAATGAAATCCTCCTTGGCAAGGTATCAATTTGTCAATTCTTTTAAGTTATGGTTGTACCGAATCGAACATGAAGTAATAAGGTGAAAGTAAATACTGAGCTGCTAAAATTCTAATACAGGCTTTGAAGGGAGGAATGAGGGAACGAGTCGAGTTAGCAACAAAATTTGGTATACATTTTGCAGATGGAAAGATAGAAGTACGTGGAGAGCCAGAATATG</gDNA_template>
            <first_frame> N  N  D  E  R  G  K  E  C  E  K  N  Q  I  G  F  R  G  T  *  S  I  C  S  R  T  W  L  S  G  Y  V  R  F  L  R  S  A  Q  T  R  T  R  Y  D  *  T  N  T  P  C  H  *  L  R  H  N  I  F  R  Y  F  K  *  L  W  A  L  H  *  *  N  P  P  W  Q  G  I  N  L  S  I  L  L  S  Y  G  C  T  E  S  N  M  K  *  *  G  E  S  K  Y  *  A  A  K  I  L  I  Q  A  L  K  G  G  M  R  E  R  V  E  L  A  T  K  F  G  I  H  F  A  D  G  K  I  E  V  R  G  E  P  E  Y  </first_frame>
            <second_frame>  T  M  T  K  E  G  K  N  V  K  R  I  K  L  G  S  E  G  L  E  V  S  V  Q  G  L  G  C  L  G  M  S  D  F  Y  G  P  P  K  P  E  P  D  M  I  E  L  I  H  H  A  I  N  S  G  I  T  F  F  D  T  S  N  S  Y  G  P  Y  T  N  E  I  L  L  G  K  V  S  I  C  Q  F  F  *  V  M  V  V  P  N  R  T  *  S  N  K  V  K  V  N  T  E  L  L  K  F  *  Y  R  L  *  R  E  E  *  G  N  E  S  S  *  Q  Q  N  L  V  Y  I  L  Q  M  E  R  *  K  Y  V  E  S  Q  N  M </second_frame>
            <third_frame>   Q  *  R  K  R  E  R  M  *  K  E  S  N  W  V  Q  R  D  L  K  Y  L  F  K  D  L  V  V  W  V  C  P  I  S  T  V  R  P  N  P  N  P  I  *  L  N  *  Y  T  M  P  L  T  P  A  *  H  F  S  I  L  Q  I  V  M  G  L  T  L  M  K  S  S  L  A  R  Y  Q  F  V  N  S  F  K  L  W  L  Y  R  I  E  H  E  V  I  R  *  K  *  I  L  S  C  *  N  S  N  T  G  F  E  G  R  N  E  G  T  S  R  V  S  N  K  I  W  Y  T  F  C  R  W  K  D  R  S  T  W  R  A  R  I   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C09HBa0226D21.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="6" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="111690" stop="111439"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>249</number_coding_nucleotides>
                  <number_encoded_amino_acids>83</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TMTKEGKNVKRIKLGSEGLEVSVQGLGCLGMSDFYGPPKPEPDMIELIHHAINSGITFFDTSNSYGPYTNEILLGKVSICQFF*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 236 chains have been computed
$ 
$ memory statistics:
$ 754368 bytes spliced alignments in total
$ 144 spliced alignments have been stored
$ 5238 bytes was the average size of a spliced alignment
$ 35928 bytes predicted gene locations in total
$ 22 predicted gene locations have been stored
$ 1633 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 269 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-15 12:57:45
-->
