psLayout version 3 match mis- rep. N's Q gap Q gap T gap T gap strand Q Q Q Q T T T T block blockSizes qStarts tStarts match match count bases count bases name size start end name size start end count --------------------------------------------------------------------------------------------------------------------------------------------------------------- 506 8 0 0 2 13 4 955 - SGN-U314675 744 201 728 C07HBa0215P04.1 122069 112851 114320 7 49,34,119,53,56,59,144, 16,76,112,231,284,340,399, 112851,112900,112934,113164,113293,113505,114176, 550 9 0 0 1 1 5 956 - SGN-U314676 676 0 560 C07HBa0215P04.1 122069 112813 114328 7 240,53,56,59,97,18,36, 116,356,409,465,524,622,640, 112813,113164,113293,113505,114176,114273,114292, 660 9 0 0 1 40 5 997 - SGN-U314677 3484 2703 3412 C07HBa0215P04.1 122069 112690 114356 6 85,236,53,56,59,180, 72,197,433,486,542,601, 112690,112817,113164,113293,113505,114176, 333 1 0 0 0 0 2 1166 - SGN-U314678 944 599 933 C07HBa0215P04.1 122069 112841 114341 3 146,23,165, 11,157,180, 112841,113541,114176, 413 0 0 0 0 0 3 343 - SGN-U314680 1101 0 413 C07HBa0215P04.1 122069 112809 113565 4 244,53,56,60, 688,932,985,1041, 112809,113164,113293,113505, 227 1 0 0 0 0 0 0 + SGN-U314681 1109 0 228 C07HBa0215P04.1 122069 112810 113038 1 228, 0, 112810, 64 5 0 0 0 0 0 0 - SGN-U314848 517 106 175 C07HBa0215P04.1 122069 65919 65988 1 69, 342, 65919, 64 5 0 0 0 0 0 0 - SGN-U314849 449 71 140 C07HBa0215P04.1 122069 65919 65988 1 69, 309, 65919, 64 5 0 0 0 0 0 0 - SGN-U314853 892 622 691 C07HBa0215P04.1 122069 65919 65988 1 69, 201, 65919, 64 5 0 0 0 0 0 0 - SGN-U314862 1094 678 747 C07HBa0215P04.1 122069 65919 65988 1 69, 347, 65919, 38 0 0 0 1 1 2 4 - SGN-U315181 817 137 176 C07HBa0215P04.1 122069 47858 47900 3 27,4,7, 641,669,673, 47858,47888,47893, 787 11 0 0 2 35 3 202 + SGN-U315565 854 0 833 C07HBa0215P04.1 122069 10177 11177 6 105,178,152,155,54,154, 0,105,283,435,615,679, 10177,10392,10659,10814,10969,11023, 745 1 0 0 0 0 4 964 + SGN-U315566 746 0 746 C07HBa0215P04.1 122069 9254 10964 5 210,207,30,260,39, 0,210,417,447,707, 9254,10075,10392,10664,10925, 1455 0 0 0 0 0 4 1821 + SGN-U315567 1472 0 1455 C07HBa0215P04.1 122069 7848 11124 5 199,406,207,178,465, 0,199,605,812,990, 7848,9058,10075,10392,10659, 35 1 0 0 0 0 1 3 - SGN-U316701 2078 2016 2052 C07HBa0215P04.1 122069 47845 47884 2 10,26, 26,36, 47845,47858, 1178 0 0 0 0 0 0 0 - SGN-U316709 1186 0 1178 C07HBa0215P04.1 122069 28865 30043 1 1178, 8, 28865, 1831 0 0 0 1 1 10 6527 - SGN-U316710 1832 0 1832 C07HBa0215P04.1 122069 29028 37386 12 443,60,71,28,147,255,63,111,54,189,338,72, 0,443,503,574,602,749,1004,1067,1178,1232,1421,1760, 29028,30302,31615,32581,32714,33362,33765,34204,35622,35802,36976,37314, 2304 0 0 0 0 0 5 4249 - SGN-U318131 2318 0 2304 C07HBa0215P04.1 122069 19698 26251 6 779,501,241,144,493,146, 14,793,1294,1535,1679,2172, 19698,21443,22983,24035,24497,26105, 447 0 0 0 0 0 1 1128 - SGN-U319682 579 1 448 C07HBa0215P04.1 122069 65604 67179 2 382,65, 131,513, 65604,67114, 1311 1 0 0 0 0 5 2945 + SGN-U321501 1343 0 1312 C07HBa0215P04.1 122069 56679 60936 6 37,130,133,167,193,652, 0,37,167,300,467,660, 56679,57005,57524,58685,59290,60284, 1941 5 0 0 1 25 3 1811 - SGN-U321835 1980 0 1971 C07HBa0215P04.1 122069 15600 19357 4 325,353,1097,171, 9,359,712,1809, 15600,16236,17744,19186, 1207 0 0 0 0 0 2 3606 + SGN-U322483 1207 0 1207 C07HBa0215P04.1 122069 98934 103747 3 745,272,190, 0,745,1017, 98934,101693,103557, 1836 0 0 0 2 2 12 2975 + SGN-U323339 1862 9 1847 C07HBa0215P04.1 122069 107891 112702 15 336,92,76,63,130,86,126,105,57,63,77,73,538,10,4, 9,345,437,513,576,706,792,918,1023,1080,1143,1220,1293,1832,1843, 107891,108328,108615,109036,109412,109668,109844,110288,110482,110959,111095,111648,112150,112688,112698, 1058 10 0 0 1 4 3 1070 + SGN-U325723 1119 0 1072 C07HBa0215P04.1 122069 89170 91308 4 87,59,131,791, 0,87,150,281, 89170,89605,89665,90517, 1095 1 0 0 0 0 5 2607 + SGN-U326420 1111 0 1096 C07HBa0215P04.1 122069 11689 15392 6 282,127,139,89,417,42, 0,282,409,548,637,1054, 11689,12913,13891,14166,14932,15350, 665 0 0 0 0 0 3 2547 + SGN-U326706 665 0 665 C07HBa0215P04.1 122069 69047 72259 4 241,165,58,201, 0,241,406,464, 69047,70586,71038,72058, 1594 1 0 0 0 0 8 3692 + SGN-U327081 3098 1503 3098 C07HBa0215P04.1 122069 128 5415 9 92,105,65,152,233,114,22,111,701, 1503,1595,1700,1765,1917,2150,2264,2286,2397, 128,390,694,1666,3454,4214,4329,4510,4714, 509 1 0 0 0 0 0 0 + SGN-U328548 510 0 510 C07HBa0215P04.1 122069 63202 63712 1 510, 0, 63202, 52 2 0 0 0 0 0 0 + SGN-U329132 1182 358 412 C07HBa0215P04.1 122069 2186 2240 1 54, 358, 2186, 549 0 0 0 0 0 0 0 - SGN-U330568 726 0 549 C07HBa0215P04.1 122069 117336 117885 1 549, 177, 117336, 43 1 0 0 0 0 0 0 + SGN-U330880 415 204 248 C07HBa0215P04.1 122069 2196 2240 1 44, 204, 2196, 621 0 0 0 0 0 4 1400 + SGN-U331867 621 0 621 C07HBa0215P04.1 122069 84281 86302 5 316,96,81,75,53, 0,316,412,493,568, 84281,84724,85355,85706,86249, 195 1 0 0 0 0 0 0 + SGN-U332200 708 0 196 C07HBa0215P04.1 122069 64087 64283 1 196, 0, 64087, 757 1 0 0 0 0 5 1579 + SGN-U332941 758 0 758 C07HBa0215P04.1 122069 50117 52454 6 173,186,180,201,14,4, 0,173,359,539,740,754, 50117,50378,51309,52233,52435,52450, 883 0 0 0 0 0 4 1988 + SGN-U335212 883 0 883 C07HBa0215P04.1 122069 7856 10727 5 191,281,165,178,68, 0,191,472,637,815, 7856,9058,10117,10392,10659, 38 1 0 0 1 4 0 0 + SGN-U337807 619 13 56 C07HBa0215P04.1 122069 47860 47899 2 29,10, 13,46, 47860,47889, 552 0 0 0 0 0 4 955 - SGN-U338942 645 0 552 C07HBa0215P04.1 122069 112821 114328 5 232,53,56,59,152, 93,325,378,434,493, 112821,113164,113293,113505,114176, 276 1 0 0 0 0 1 111 - SGN-U338943 359 0 277 C07HBa0215P04.1 122069 112834 113222 2 219,58, 82,301, 112834,113164, 506 0 0 0 0 0 4 955 - SGN-U338944 594 29 535 C07HBa0215P04.1 122069 112877 114338 5 176,53,56,59,162, 59,235,288,344,403, 112877,113164,113293,113505,114176, 338 0 0 0 0 0 2 187 - SGN-U338945 485 0 338 C07HBa0215P04.1 122069 112813 113338 3 240,53,45, 147,387,440, 112813,113164,113293, 338 0 0 0 0 0 2 187 - SGN-U338946 485 0 338 C07HBa0215P04.1 122069 112813 113338 3 240,53,45, 147,387,440, 112813,113164,113293, 210 3 0 0 0 0 1 111 + SGN-U338947 273 60 273 C07HBa0215P04.1 122069 112870 113194 2 183,30, 60,243, 112870,113164, 249 0 0 0 0 0 3 768 - SGN-U338950 532 283 532 C07HBa0215P04.1 122069 113313 114330 4 27,8,60,154, 0,27,35,95, 113313,113341,113504,114176, 276 1 0 0 0 0 1 111 - SGN-U338951 438 0 277 C07HBa0215P04.1 122069 112834 113222 2 219,58, 161,380, 112834,113164, 549 0 0 0 0 0 4 955 - SGN-U338952 640 0 549 C07HBa0215P04.1 122069 112824 114328 5 229,53,56,59,152, 91,320,373,429,488, 112824,113164,113293,113505,114176, 466 0 0 0 1 2 5 956 - SGN-U338956 513 0 468 C07HBa0215P04.1 122069 112789 114211 6 5,258,53,56,59,35, 45,52,310,363,419,478, 112789,112795,113164,113293,113505,114176, 499 0 0 0 0 0 4 955 + SGN-U338957 671 3 502 C07HBa0215P04.1 122069 112875 114329 5 178,53,56,59,153, 3,181,234,290,349, 112875,113164,113293,113505,114176, 64 5 0 0 0 0 0 0 - SGN-U339120 456 109 178 C07HBa0215P04.1 122069 65919 65988 1 69, 278, 65919, 64 5 0 0 0 0 0 0 - SGN-U339128 370 73 142 C07HBa0215P04.1 122069 65919 65988 1 69, 228, 65919, 544 11 0 0 0 0 0 0 - SGN-U342590 555 0 555 C07HBa0215P04.1 122069 25535 26090 1 555, 0, 25535, 351 4 0 0 0 0 0 0 + SGN-U343133 355 0 355 C07HBa0215P04.1 122069 76603 76958 1 355, 0, 76603, 548 2 0 0 0 0 0 0 - SGN-U344159 571 21 571 C07HBa0215P04.1 122069 103780 104330 1 550, 0, 103780, 32 2 0 0 0 0 0 0 + SGN-U344809 589 400 434 C07HBa0215P04.1 122069 2155 2189 1 34, 400, 2155, 61 4 0 0 0 0 0 0 - SGN-U344997 527 362 427 C07HBa0215P04.1 122069 67114 67179 1 65, 100, 67114, 665 9 0 0 2 11 4 308 + SGN-U344998 685 0 685 C07HBa0215P04.1 122069 116347 117329 5 86,223,39,185,141, 0,92,320,359,544, 116347,116438,116665,116907,117188, 479 3 0 0 0 0 0 0 - SGN-U346168 482 0 482 C07HBa0215P04.1 122069 27113 27595 1 482, 0, 27113, 71 1 0 0 0 0 0 0 + SGN-U346716 654 164 236 C07HBa0215P04.1 122069 73957 74029 1 72, 164, 73957, 436 1 0 0 0 0 0 0 - SGN-U346913 437 0 437 C07HBa0215P04.1 122069 16898 17335 1 437, 0, 16898,