<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-14 20:48:14"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345211" ref_strand="+" ref_description="SGN-U345211        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | thioredoxin H-type 2 (TRX-H-2) (Gif2), identical to SP:Q38879 Thioredoxin H-type 2 (TRX-H-2) {Arabidopsis thaliana}; identical to cDNA (Gif2) mRNA for thioredoxin GI:992963 | chr5:16007944-16009159 REVERSE | Aliases: MYH19.110, MYH19_110(evalue: 6e-28, score=121) genbank/nr: gi|66096352|gb|AAY42864.1| thioredoxin H [Nicotiana alata] (evalue: 8e-34, score=147)">
      <seq>caatcacaccacaaagcaagaggtctcaagtcattgcttttcactcttcaacaaaatggaagctccattttgattctttgaaaaatacaaacaaactgattgttattgacttcacagctacatggtgtggtccttgcaaatacatggaaccagttctcaatgactttgctgctaaatatacagacgttgagtttgtcaagattgatgtcgatgagctggatgatgtagctcaagaatatggggttcaagcaatgccaacgttcgtgctgataaagaaaggtaaggtagttgacaagattgttggagcagacaaggatgggctacagaagaagattcagaaacacaaagctatctacgtctaaacaaaccaaaggcagtaacgtaatgagcagggtttactcgacgataggtctctgtgcagaataaatgttatatctttgtcagtaagaactagttatgtactcacctatggtctttctcacttctgatagtaaaatccaaacaggctgatttaagc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="+" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="12098" stop="13470"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12398" g_stop="12495" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="12496" i_stop="12650" i_length="155">
            <donor d_prob="0.694" d_score="1.00"/>
            <acceptor a_prob="0.215" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="12651" g_stop="12773" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="221" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="12774" i_stop="12874" i_length="101">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="12875" g_stop="13170" g_length="296"/>
          <reference_exon_boundary r_type="cDNA" r_start="222" r_stop="517" r_length="296" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="+" ref_id="SGN-U345211" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>517</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345211" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12398" e_stop="12495"/>
          <exon e_start="12651" e_stop="12773"/>
          <exon e_start="12875" e_stop="13170"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAATCACACCACAAAGCAAGAGGTCTCAAGTCATTGCTTTTCACTCTTCAACAAAATGGAAGCTCCATTTTGATTCTTTGAAAAATACAAACAAACTGGTAATCATTAACTGTGTACAAGACTATCACAGTATTTAGTCGTCTTTTGAGTGACCTGATAGTGTTAAAAATTTAATACTTGTGTTATAGAAGTCATTGTATATTAGAAGTTAGGCAGTACTAATCATTGGTATCTTTTGCTCTGTTGCTACTAGATTGTTATTGACTTCACAGCTACATGGTGTGGTCCTTGCAAATACATGGAACCAGTTCTCAATGACTTTGCTGCTAAATATACAGACGTTGAGTTTGTCAAGATTGATGTCGATGAGCTGGATGTATACTCTTATTGTCTTTAACTTGATAACCCTGGTCTTTTTCCCTACAATAGTGATATTTATACGGATACTAATTTCTCTAAATCTTTGACTGTAAACAGGATGTAGCTCAAGAATATGGGGTTCAAGCAATGCCAACGTTCGTGCTGATAAAGAAAGGTAAGGTAGTTGACAAGATTGTTGGAGCAGACAAGGATGGGCTACAGAAGAAGATTCAGAAACACAAAGCTATCTACGTCTAAACAAACCAAAGGCAGTAACGTAATGAGCAGGGTTTACTCGACGATAGGTCTCTGTGCAGAATAAATGTTATATCTTTGTCAGTAAGAACTAGTTATGTACTCACCTATGGTCTTTCTCACTTCTGATAGTAAAATCCAAACAGGCTGATTTAAGC</genome_strand>
        <mrna_strand>CAATCACACCACAAAGCAAGAGGTCTCAAGTCATTGCTTTTCACTCTTCAACAAAATGGAAGCTCCATTTTGATTCTTTGAAAAATACAAACAAACTG...........................................................................................................................................................ATTGTTATTGACTTCACAGCTACATGGTGTGGTCCTTGCAAATACATGGAACCAGTTCTCAATGACTTTGCTGCTAAATATACAGACGTTGAGTTTGTCAAGATTGATGTCGATGAGCTGGAT.....................................................................................................GATGTAGCTCAAGAATATGGGGTTCAAGCAATGCCAACGTTCGTGCTGATAAAGAAAGGTAAGGTAGTTGACAAGATTGTTGGAGCAGACAAGGATGGGCTACAGAAGAAGATTCAGAAACACAAAGCTATCTACGTCTAAACAAACCAAAGGCAGTAACGTAATGAGCAGGGTTTACTCGACGATAGGTCTCTGTGCAGAATAAATGTTATATCTTTGTCAGTAAGAACTAGTTATGTACTCACCTATGGTCTTTCTCACTTCTGATAGTAAAATCCAAACAGGCTGATTTAAGC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327667" ref_strand="+" ref_description="SGN-U327667        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: AT1G59725.1 | Symbol: None | DNAJ heat shock protein, putative, similar to SP:Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain | chr1:21954403-21955875 FORWARD | Aliases: F23H11.4, F23H11_4 (evalue: 2e-50, score=195) genbank/nr: gi|34811738|gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [Nicotiana tabacum] (evalue: 8e-62, score=239)">
      <seq>caggttggaagaaaggcacaaaaataacttttccagagaaaggggactatgaatatggagctgccccgggtgatcttatttttgtgattgatgaaaagccacatgctgtcttcaagagggatggaaatgatctagtcacgaatcagaaaatatcgttactggatgctctcactggaaaaactatcagcttgactactttggacggaagggaactcacaataccaatcaaagaaatcgtcaaaccaggacaggagctgataatccaaaatgagggaatgccaatatcaaaggaacgtggcaaaaaagggaatttgaagatcaagtttgacattaaatttccatcaaggctaaatgcagatcagaaatctgatctcagaagggtgctatgcaggagtattgactagtcctatttttaacttaaggtgtcactaacactatcttggagttgcgcggaatgtaaatatttaacaagctttctgtagaaatgaaattgtacatattaggatataatcttaaggatgcgttccaacatttacaaatagtaagcaccaaaagaggagctaatgtagctacttctttagctgcttgcattttcttttgttggatgtaaaaggagtaagtagtttaatagctgtgttgtttgatttggaggtggatactatatattaagtattgtagttgcgagtagtggctctaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="14588" stop="13293"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14288" g_stop="13594" g_length="695"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="695" r_length="695" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="696" polyA_stop="712"/>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U327667" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>695</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U327667" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14288" e_stop="13594"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGGTTGGAAGAAAGGCACAAAAATAACTTTTCCAGAGAAAGGGGACTATGAATATGGAGCTGCCCCGGGTGATCTTATTTTTGTGATTGATGAAAAGCCACATGCTGTCTTCAAGAGGGATGGAAATGATCTAGTCACGAATCAGAAAATATCGTTACTGGATGCTCTCACTGGAAAAACTATCAGCTTGACTACTTTGGACGGAAGGGAACTCACAATACCAATCAAAGAAATCGTCAAACCAGGACAGGAGCTGATAATCCAAAATGAGGGAATGCCAATATCAAAGGAACGTGGCAAAAAAGGGAATTTGAAGATCAAGTTTGACATTAAATTTCCATCAAGGCTAAATGCAGATCAGAAATCTGATCTCAGAAGGGTGCTATGCAGGAGTATTGACTAGTCCTATTTTTAACTTAAGGTGTCACTAACACTATCTTGGAGTTGCGCGGAATGTAAATATTTAACAAGCTTTCTGTAGAAATGAAATTGTACATATTAGGATATAATCTTAAGGATGCGTTCCAACATTTACAAATAGTAAGCACCAAAAGAGGAGCTAATGTAGCTACTTCTTTAGCTGCTTGCATTTTCTTTTGTTGGATGTAAAAGGAGTAAGTAGTTTAATAGCTGTGTTGTTTGATTTGGAGGTGGATACTATATATTAAGTATTGTAGTTGCGAGTAGTGGCTCT</genome_strand>
        <mrna_strand>CAGGTTGGAAGAAAGGCACAAAAATAACTTTTCCAGAGAAAGGGGACTATGAATATGGAGCTGCCCCGGGTGATCTTATTTTTGTGATTGATGAAAAGCCACATGCTGTCTTCAAGAGGGATGGAAATGATCTAGTCACGAATCAGAAAATATCGTTACTGGATGCTCTCACTGGAAAAACTATCAGCTTGACTACTTTGGACGGAAGGGAACTCACAATACCAATCAAAGAAATCGTCAAACCAGGACAGGAGCTGATAATCCAAAATGAGGGAATGCCAATATCAAAGGAACGTGGCAAAAAAGGGAATTTGAAGATCAAGTTTGACATTAAATTTCCATCAAGGCTAAATGCAGATCAGAAATCTGATCTCAGAAGGGTGCTATGCAGGAGTATTGACTAGTCCTATTTTTAACTTAAGGTGTCACTAACACTATCTTGGAGTTGCGCGGAATGTAAATATTTAACAAGCTTTCTGTAGAAATGAAATTGTACATATTAGGATATAATCTTAAGGATGCGTTCCAACATTTACAAATAGTAAGCACCAAAAGAGGAGCTAATGTAGCTACTTCTTTAGCTGCTTGCATTTTCTTTTGTTGGATGTAAAAGGAGTAAGTAGTTTAATAGCTGTGTTGTTTGATTTGGAGGTGGATACTATATATTAAGTATTGTAGTTGCGAGTAGTGGCTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341313" ref_strand="+" ref_description="SGN-U341313        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G10350.1 | Symbol: None | DNAJ heat shock protein, putative, similar to SP:Q9QYJ3 DnaJ homolog subfamily B member 1 (Heat shock 40 kDa protein 1) {Mus musculus}; contains Pfam profile PF00226: DnaJ domain | chr1:3393409-3395057 REVERSE | Aliases: F14N23.23, F14N23_23 (evalue: 4e-78, score=288) genbank/nr: gi|34811738|gb|AAQ82702.1| potyviral capsid protein interacting protein 2a [Nicotiana tabacum] (evalue: 1e-104, score=382)">
      <seq>gtggtgattattccaacggttagctacaatgggagttgattactataacttactgaaagtatctaggaatgcgagtgaagaagatttgaagagatcgtacaagcgattagcgatgaaatggcatccagataagaatagtcagaacaataaggaagcagaagcgaaattcaagcagatttctgaggcgtatgatgtgcttagtgatcctcagaagcgtcagatctatgatttgtacggtgacgatgcgttgaagtctggtcaatttgcttcggcatcgccgactagtgctggtagtgggactggtaatggtagagggtttagattcaatacgcgtgatgcggaggatatttttgctgagttttttggtggatcggaggggcttagtagtggttctggtgccggagttggtaggaaagcagcgccggtggagaataaacttccgtgtagcttggaagagctttacaaaggatctagaaggaaaatgaagatctcaaggattcttctggatgac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="17080" stop="15970"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="16780" g_stop="16270" g_length="511"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="511" r_length="511" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U341313" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>511</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U341313" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="16780" e_stop="16270"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGGTGATTATTCCAACGGTTAGCTACAATGGGAGTTGATTACTATAACTTACTGAAAGTATCTAGGAATGCGAGTGAAGAAGATTTGAAGAGATCGTACAAGCGATTAGCGATGAAATGGCATCCAGATAAGAATAGTCAGAACAATAAGGAAGCAGAAGCGAAATTCAAGCAGATTTCTGAGGCGTATGATGTGCTTAGTGATCCTCAGAAGCGTCAGATCTATGATTTGTACGGTGACGATGCGTTGAAGTCTGGTCAATTTGCTTCGGCATCGCCGACTAGTGCTGGTAGTGGGACTGGTAATGGTAGAGGGTTTAGATTCAATACGCGTGATGCGGAGGATATTTTTGCTGAGTTTTTTGGTGGATCGGAGGGGCTTAGTAGTGGTTCTGGTGCCGGAGTTGGTAGGAAAGCAGCGCCGGTGGAGAATAAACTTCCGTGTAGCTTGGAAGAGCTTTACAAAGGATCTAGAAGGAAAATGAAGATCTCAAGGATTCTTCTGGATGAC</genome_strand>
        <mrna_strand>GTGGTGATTATTCCAACGGTTAGCTACAATGGGAGTTGATTACTATAACTTACTGAAAGTATCTAGGAATGCGAGTGAAGAAGATTTGAAGAGATCGTACAAGCGATTAGCGATGAAATGGCATCCAGATAAGAATAGTCAGAACAATAAGGAAGCAGAAGCGAAATTCAAGCAGATTTCTGAGGCGTATGATGTGCTTAGTGATCCTCAGAAGCGTCAGATCTATGATTTGTACGGTGACGATGCGTTGAAGTCTGGTCAATTTGCTTCGGCATCGCCGACTAGTGCTGGTAGTGGGACTGGTAATGGTAGAGGGTTTAGATTCAATACGCGTGATGCGGAGGATATTTTTGCTGAGTTTTTTGGTGGATCGGAGGGGCTTAGTAGTGGTTCTGGTGCCGGAGTTGGTAGGAAAGCAGCGCCGGTGGAGAATAAACTTCCGTGTAGCTTGGAAGAGCTTTACAAAGGATCTAGAAGGAAAATGAAGATCTCAAGGATTCTTCTGGATGAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341843" ref_strand="+" ref_description="SGN-U341843        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>cacaaaacaaaagaaaaacttatcactcaaatatagaaaatggagaaggcatcaagaatcttgttctctctttttgttgtgttcattttgttaggttcaccttcatgtatggtgatgggacaaggcaaggcatgtaaaaatgtcaaagattgttatactttattttgcaaacatgaacatctagtttgtttagatggacattgtatatgcaatgagtcaccaaaagaatttgtagcttcttgcaaaaatggtggttattgtaagaatccatgaaaggtgtaacaaaatattttatcttattattctagtaaactaataataaatatagctattaccattttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="+" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="24026" stop="25159"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24326" g_stop="24419" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="94" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24420" i_stop="24612" i_length="193">
            <donor d_prob="0.980" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24613" g_stop="24859" g_length="247"/>
          <reference_exon_boundary r_type="cDNA" r_start="95" r_stop="341" r_length="247" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="342" polyA_stop="374"/>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="+" ref_id="SGN-U341843" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>341</cumulative_length_of_scored_exons>
        <coverage percentage="0.912" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U341843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24326" e_stop="24419"/>
          <exon e_start="24613" e_stop="24859"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACAAAACAAAAGAAAAACTTATCACTCAAATATAGAAAATGGAGAAGGCATCAAGAATCTTGTTCTCTCTTTTTGTTGTGTTCATTTTGTTAGGTTAGATTTCTTTCAATTTTCTCTCTTTATTTTTCGTAAAAGATTCGATACTGCAAATGACATTTTACATTGATTGTTTTCATCTTAACCCCGCCCCAATCACCTCATCTCATCCATAGCAATTATTTCTATTTATTTTCAATGAATTTAACTATTGATCTTAACTTTTTTTTTTTAATTGTTTCTTATATAGGTTCACCTTCATGTATGGTGATGGGACAAGGCAAGGCATGTAAAAATGTCAAAGATTGTTATACTTTATTTTGCAAACATGAACATCTAGTTTGTTTAGATGGACATTGTATATGCAATGAGTCACCAAAAGAATTTGTAGCTTCTTGCAAAAATGGTGGTGATTGTAAGAATCCATGAAAGGTGTAACAAAATATTTTATCTTATTATTCTAGTAAACTAATAATAAATATAGCTATTACCATTTT</genome_strand>
        <mrna_strand>CACAAAACAAAAGAAAAACTTATCACTCAAATATAGAAAATGGAGAAGGCATCAAGAATCTTGTTCTCTCTTTTTGTTGTGTTCATTTTGTTAG.................................................................................................................................................................................................GTTCACCTTCATGTATGGTGATGGGACAAGGCAAGGCATGTAAAAATGTCAAAGATTGTTATACTTTATTTTGCAAACATGAACATCTAGTTTGTTTAGATGGACATTGTATATGCAATGAGTCACCAAAAGAATTTGTAGCTTCTTGCAAAAATGGTGGTTATTGTAAGAATCCATGAAAGGTGTAACAAAATATTTTATCTTATTATTCTAGTAAACTAATAATAAATATAGCTATTACCATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329070" ref_strand="+" ref_description="SGN-U329070        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | Encodes a defensin-like (DEFL) family protein. | chr2:10738701-10739103 FORWARD | Aliases: None(evalue: 7e-05, score=42.4)">
      <seq>atcattatctattgagatatagtatacaaaatggagaagacatcaattgttttgctctcccttattgccttgataattttgttaggttcaccatcgtgtatggcagcaacgtgtaaaacatcaaaagattgtgatcctagaggttgtggaagtcgaggtatgctatgccttaatggagtttgtgtgtgtccctctgaaataaggaagaatggctgcaccaaagatagtgattgtgtaagcctatgtcctcctaaaactttgccatcttgtaataaaggaatttgcttttgtggacatcatgtataacctaatacatgtttgagttataagagaacatttttttttttatatcattaatagtaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="+" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="36985" stop="38194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37285" g_stop="37369" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="85" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37370" i_stop="37621" i_length="252">
            <donor d_prob="0.820" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="37622" g_stop="37880" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="344" r_length="259" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="+" ref_id="SGN-U329070" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>344</cumulative_length_of_scored_exons>
        <coverage percentage="0.948" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U329070" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37285" e_stop="37369"/>
          <exon e_start="37622" e_stop="37880"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATCATTATCTATTGAGATATAGTATACAAAATGGAGAAGACATCAATTGTTTTGCTCTCCCTTATTGCCTTGATAATTTTGTTAGGTACCCCCCCCCCCCCCCCACACACACACAAACCAAGAATTTTATATATGTATACATAGAATATGATTCTCTTTTATGAAATTAAAGGGGTTCAGATGAACCCTCTTGTACAGCTAGTTGAAGCCTTTAGCATGTTATTCTAATAAATGTCATGTATTATACACAAATGCGTAGTTTTGTTTGACTTATACATTGAATATTTAATTTCGATAAATATATCTTAATTAATTTTTTCTTTTGGTTTTTTTCTAGGTTCACCATCGTGTATGGCAGCAACGTGTAAAACATCAAAAGATTGTGATCCTAGAGGTTGTGGAAGTCGAGGTATGCTATGCCTTAATGGAGTTTGTGTGTGTCCCTCTGAAATAAGGAAGAATGGCTGCACCAAAGATAGTGATTGTGTAAGCCTATGTCCTCCTAAAACTTTGCCATCTTGTAATAAAGGAATTTGCTTTTGTGGACATCATGTATAACCTAATACATGTTTGAGTTATAAGAGAACATTTTTTTT</genome_strand>
        <mrna_strand>ATCATTATCTATTGAGATATAGTATACAAAATGGAGAAGACATCAATTGTTTTGCTCTCCCTTATTGCCTTGATAATTTTGTTAG............................................................................................................................................................................................................................................................GTTCACCATCGTGTATGGCAGCAACGTGTAAAACATCAAAAGATTGTGATCCTAGAGGTTGTGGAAGTCGAGGTATGCTATGCCTTAATGGAGTTTGTGTGTGTCCCTCTGAAATAAGGAAGAATGGCTGCACCAAAGATAGTGATTGTGTAAGCCTATGTCCTCCTAAAACTTTGCCATCTTGTAATAAAGGAATTTGCTTTTGTGGACATCATGTATAACCTAATACATGTTTGAGTTATAAGAGAACATTTTTTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329322" ref_strand="+" ref_description="SGN-U329322        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: EMB2421 | similar to phenol 2-monooxygenase like FAD dependent oxidoreductase of plant origin in apicomplexans [Cryptosporidium parvum] (GB:EAK89698.1); contains InterPro domain Flavoprotein monooxygenase (InterPro:IPR000733); contains InterPro domain Monooxygenase, FAD-binding (InterPro:IPR002938); contains InterPro domain NAD-binding site (InterPro:IPR000205); contains InterPro domain Aromatic-ring hydroxylase (InterPro:IPR003042) | chr1:8635198-8639146 FORWARD | Aliases: F3I6.28, F3I6_28, EMB2421, EMBRYO DEFECTIVE 2421(evalue: 6e-60, score=227) genbank/nr: EMB2421;(evalue: 4e-58, score=227)">
      <seq>attaagacaaatatttgaagaaggacagagccttcagctccagttccctgctgaggatcttggtttcaggtatcggaaaggagtattggtgtctgaagatgacgttgtggtggatgtgcatgaagcaccaacaggacgaagaagggattatattccttgctcagaacctggatcaaggctccctcatatgaacgttgaactgttttctaaaccgtcaagcaaggaaatattatctactctagaccttgtatctatagataaggttgagtttatccttataattgcgccattcaaggagtcatactgtctagctcgagctgcactagaggtggccaacaaatttaaactccatttaaaggtttgtgtaatgtggccaaacggaagtattgacggagctggaagaactgaggctgcattgacaccctggaaatcttttgaagaagttgtggaagtgaagaggtcatcggattcaccatcctggtgggacatctgtcaaatgacagacagaggagccatattagtgagacctgatgaacacgttgcttggcgttcaaaatccagaattgcagatcccatcatgacgatgaaaaacattttccacattgttacaggagttgattgcacgtgataacacctttgaagaaatttttacccccatttatgtattgtagtcttgacattcattctctgatatatattagctagattacaaggtaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="42427" stop="38932"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="42127" g_stop="42059" g_length="69"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="69" r_length="69" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="42058" i_stop="41831" i_length="228">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.895" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="41830" g_stop="41677" g_length="154"/>
          <reference_exon_boundary r_type="cDNA" r_start="70" r_stop="223" r_length="154" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="41676" i_stop="39728" i_length="1949">
            <donor d_prob="0.804" d_score="1.00"/>
            <acceptor a_prob="0.669" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="39727" g_stop="39226" g_length="502"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="725" r_length="502" r_score="0.986"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U329322" ref_strand="+">
        <total_alignment_score>0.990</total_alignment_score>
        <cumulative_length_of_scored_exons>725</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329322" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="42127" e_stop="42059"/>
          <exon e_start="41830" e_stop="41677"/>
          <exon e_start="39727" e_stop="39226"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAGACAAATATTTGAAGAAGGACAGAGCCTTCAGCTCCAGTTCCCTGCTGAGGATCTTGGTTTCAGGTTGCGTATCTATTCTTTTTTTATCCATCTCATGCAAATTGTTAAATCAGTTTTTTCAATTATTATTGTCTAATTTACGTCTCCTATAAATGCTGGATGCTGTCTCAACTCTGAATAGAACTCCAAAAAAGCCATCTTGGATTACGCCAGATGATTGTTTCTATCTTACCTATCTTGTTGGAAGTTCTTGTTTTCACCAGTACTCTAATTTCGAGATGTTCACATTAGGTATCGGAAAGGAGTATTGGTGTCTGAAGATGACGTTGTGGTGGATGTGCATGAAGCACCAACAGGACGAAGAAGGGATTATATTCCTTGCTCAGAACCTGGATCAAGGCTCCCTCATATGAACGTTGAACTGTTTTCTAAACCGTCAAGCAAGGTATGAAATCTTTCAAGGGAACATTGCCTTGGTAGGAGCCAGACTTTGTTAGATCATAGTCTTGTTAGTCATCTCTTCACACGTGTGGAGAAGCCAAATAACTGAATCAAAAAGGAATTTTTTTTAACCTTTAGCCTTCCTAAAAATTACAATATTCGACTTGCAGCCATTTTGTGTTACGACCCGAGAGTAACCCCTGGGCGTAACAACACGTACTTGACCTCCTGGAGGTCTTATACAAGCCCTTAACATTCGTTCATTGCATAAGTATGAAAATTAGTGCGGAATTAGAACTTTTTCTTAATATAACACAAGACTAGAAAGTCATCTTATTTATAAATCATTAATACAAAGTTAGGATACTAAGTCTCATCTTGCCATCTTAGACACGACTTCAATATAATAAGGACACGACCCGTACAATATAAACAGAACATTACTAATCTATTACATGAACTTAAAGAAACTCTTAACATGAAGGTCTTTGAATCATTAAGGACACACCCGAACTTGGGAATAGTAATCCAAGCTCTTCATTATAGGAAAAGTCCTTTAGCCATTGCCGCCTACACTTGGTGTAAAAAGATGAAGAAGAATGCTATTAATAGAAGAATGCATCAAGTATGATAATCATGCAACAACTTGCTTTAAAGAGGACATTTAGTTGGAACCATGCATCATATCATTTTAGTGAAACTCCTTAACCATTTGATACAATAAACACAATTTAGTTCATATACATTATAATAGACATGGATACCATTCACAACAACACATAAAACCATTTATCACATTTAAGACACATTCAATAACTCCAATATATTACCTTGACTTTTTACCTCAACTCCCTTACCTCAAGCAACCTTTAAGTAATACTTAGTGTAATACATGAATAGTGTCTCATTCCACCATTCATACCAAAGTATCACCTTAAGGTCACCAAGGGTGAACATTCATACAACCTTCATTAATCCAACCATATGTATTCTTAAGGACATAGCATATCATGAAACATAACCTTCACATAAGAACCATCACCTAAGACAACCTCAAGTCACACTAGTGCAATGTTCAAGTAGCATCCCGTAATACTATTCACACTAAGTGTTCCTATGAAGTCACCTAGACTAGGCACATCATATTCAATAAGACACAACGCATTCACTTAACATTAGACATAAGACTAACATACTTCATAGACATCATATAAGCACTCATTCATTTATTACATTATAGTCATAACCCATTTAGTCTTTAAGTGCATCACATGAACAATATACAAGTCCATACTCCAAGTAACAACATGATGAAACCATAGTCAATCGGCCAAGACTTTGGCAGTGTTGCAGGTTTAATCGGCGGCCACCATTGATGGACCATCAATGGATTGATGGTCCCATCTTGGTCATCCGTCAATGGTGACCAAGGCTTGTCATTTTGGGGGCTAAGCTCCCACGGCTAACTGTGGAGCCACGCCCCTTTTCTACGGGGCATCAATTGGTTAACAGGGTGTCGTTTGTGGTCGTTGGTCAAGCTGTCTTAACAACTTCTTGGCCAATGTTTGTGTCCTCCTCAAGAATCCTTAGGTTGGTCCTTGGGGAGTCGTACCCGGACGTTTCGACCCTAAACATGACCATCTAGATACTAGGGTCACCTCTAATCATAGTAGACTCGAAACGACACACCAAAACAAGGCAAACATACTAGAACACACTAGCACACAAAAGACTAGTTTGCGGATGTCTTGGTCGTCCTTTGACGTTTGACCTTGAAACTCATTAAACCAACTATTAAAGGTTGTTTCTCACCTTATTAACAAGTTTCTAGCTCTTAAAACTCATGTGAGGCTCTAGTTCATCCTAGTTCATTTTGAGGATCAAAATATTTTATTTCAAGTTTGCATTACTATTCTTTCTGACAGAAATCAGAATACAATCAATCATATGCAGGAAATATTATCTACTCTAGACCTTGTATCTATAGATAAGGTTGAGTTTATCCTTATAATTGCGCCATTCAAGGAGTCATACTGTCTAGCTCGAGCTGCACTAGAGGTGGCCAACAAATTTAAACTCCATTTAAAGGTTTGTGTAATGTGGCCAAACGGAAGTATTGACGGAGCTGGAAGAACTGAGGCTGCATTGACACCCTGGAAATCTTTTGAAGAAGTTGTGGAAGTGAAGAGGTCATCGGATTCACCATCCTGGTGGGACATCTGTCAAATGACAGACAGAGGAGCCATATTAGTGAGACCTGATGAACACGTTGCTTGGCGTTCAAAATCCAGAATTGCAGATCCCATCATGACGATGAAAAACATTTTCCACATTGTTACAGGAGTTGATTGCACGTGATAACACCTTTGAAGAAATTTTTACCCCCATTTATGTATTGTAGTCTTGACATTCATTCTCTGATATATATTAGCTAGATTACAAGGTTGAAGTACTT</genome_strand>
        <mrna_strand>ATTAAGACAAATATTTGAAGAAGGACAGAGCCTTCAGCTCCAGTTCCCTGCTGAGGATCTTGGTTTCAG....................................................................................................................................................................................................................................GTATCGGAAAGGAGTATTGGTGTCTGAAGATGACGTTGTGGTGGATGTGCATGAAGCACCAACAGGACGAAGAAGGGATTATATTCCTTGCTCAGAACCTGGATCAAGGCTCCCTCATATGAACGTTGAACTGTTTTCTAAACCGTCAAGCAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAATATTATCTACTCTAGACCTTGTATCTATAGATAAGGTTGAGTTTATCCTTATAATTGCGCCATTCAAGGAGTCATACTGTCTAGCTCGAGCTGCACTAGAGGTGGCCAACAAATTTAAACTCCATTTAAAGGTTTGTGTAATGTGGCCAAACGGAAGTATTGACGGAGCTGGAAGAACTGAGGCTGCATTGACACCCTGGAAATCTTTTGAAGAAGTTGTGGAAGTGAAGAGGTCATCGGATTCACCATCCTGGTGGGACATCTGTCAAATGACAGACAGAGGAGCCATATTAGTGAGACCTGATGAACACGTTGCTTGGCGTTCAAAATCCAGAATTGCAGATCCCATCATGACGATGAAAAACATTTTCCACATTGTTACAGGAGTTGATTGCACGTGATAACACCTTTGAAGAAATTTTTACCCCCATTTATGTATTGTAGTCTTGACATTCATTCTCTGATATATATTAGCTAGATTACAAGGTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346102" ref_strand="+" ref_description="SGN-U346102        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G59720.1 | Symbol: None | pentatricopeptide (PPR) repeat-containing protein, contains Pfam profile PF01535: PPR repeat | chr1:21943533-21945449 REVERSE | Aliases: F23H11.3, F23H11_3 (evalue: 8e-56, score=214) genbank/nr: gi|8778758|gb|AAF79766.1| T30E16.32 [Arabidopsis thaliana](evalue: 6e-54, score=214)">
      <seq>cactgatgaccgataagggtattagaaaagatccgggttgtagtttaattgaaattaatggggttttccatgagtttttcgctggagatacatctcatttgcatactagagaaatttatgagtttttggatgttatagacaaaagactcctagcagcagggtatgttcctgatctgtcacacgcatcaaccgttgatgaacttgataatgggaagagacagtcgcttaaactgcacagtgagagacttgccattgcttatggacttctgaaactaaaaccaggtactcctttacgcattttcaagaatttgcgcatatgcagtgattgtcacaatgtaaccaaattaatttcgaaagtctttgatgttgaaattattgttagagatcgtgttcggtttcatcactttaggaatgggtcctgtacctgcaaagattattggtgaacataatgtatactaacattatatgaatacaattgtcaattcatatgcttcaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="+" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="49395" stop="50490"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="49695" g_stop="50179" g_length="485"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="485" r_length="485" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="495" polyA_stop="504"/>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="+" ref_id="SGN-U346102" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>485</cumulative_length_of_scored_exons>
        <coverage percentage="0.962" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346102" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="49695" e_stop="50179"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CACTGATGACCGATAAGGGTATTAGAAAAGATCCGGGTTGTAGTTTAATTGAAATTAATGGGGTTTTCCATGAGTTTTTCGCTGGAGATACATCTCATTTGCATACTAGAGAAATTTATGAGTTTTTGGATGTTATAGACAAAAGACTCCTAGCAGCAGGGTATGTTCCTGATCTGTCACACGCATCAACCGTTGATGAACTTGATAATGGGAAGAGACAGTCGCTTAAACTGCACAGTGAGAGACTTGCCATTGCTTATGGACTTCTGAAACTAAAACCAGGTACTCCTTTACGCATTTTCAAGAATTTGCGCATATGCAGTGATTGTCACAATGTAACCAAATTAATTTCGAAAGTCTTTGATGTTGAAATTATTGTTAGAGATCGTGTTCGGTTTCATCACTTTAGGAATGGGTCCTGTACCTGCAAAGATTATTGGTGAACATAATGTATACTAACATTATATGAATACAATTGTCAATTC</genome_strand>
        <mrna_strand>CACTGATGACCGATAAGGGTATTAGAAAAGATCCGGGTTGTAGTTTAATTGAAATTAATGGGGTTTTCCATGAGTTTTTCGCTGGAGATACATCTCATTTGCATACTAGAGAAATTTATGAGTTTTTGGATGTTATAGACAAAAGACTCCTAGCAGCAGGGTATGTTCCTGATCTGTCACACGCATCAACCGTTGATGAACTTGATAATGGGAAGAGACAGTCGCTTAAACTGCACAGTGAGAGACTTGCCATTGCTTATGGACTTCTGAAACTAAAACCAGGTACTCCTTTACGCATTTTCAAGAATTTGCGCATATGCAGTGATTGTCACAATGTAACCAAATTAATTTCGAAAGTCTTTGATGTTGAAATTATTGTTAGAGATCGTGTTCGGTTTCATCACTTTAGGAATGGGTCCTGTACCTGCAAAGATTATTGGTGAACATAATGTATACTAACATTATATGAATACAATTGTCAATTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U321103" ref_strand="+" ref_description="SGN-U321103        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam profile: PF04601 protein of unknown function (DUF569 | chr1:9407112-9411159 REVERSE | Aliases: T7N9.16, T7N9_16(evalue: 7e-131, score=444) genbank/nr: gi|42562344|ref|NP_174030.2| expressed protein [Arabidopsis thaliana] (evalue: 6e-129, score=444)">
      <seq>ctttccataataaatccattattaatattcctcttcaattttttttttttacttaaattccatatatattcatcactaattacaatttttttttattaaaatggattttttctacaaagccaaagctgtaaaattaaaaagtcatctagacaaataccttgtagccgatgatgatcaagaatatccgacaaagccgaaacggctcatcaagaaaagcccggtggcttgttgaacttgttgaagccgaaaacagccactttatacggcttaaaagtggctccggcaagtatctcacggcttccgacgagccgtttcttcttggcatgaccggaaaaaaggtaattcaaactttgcccgaagaaatgaaggacttgagaatcgaatgggaagtaataagggatggatttcaagtaaaattaaggggttttggaggaaaatatttacgtgcaaatggaggaatgccaccatggagaaataaagtaacacatgataatccatatagtggtagtacacaaaattggattttgtggaacgttgaacctattgatgtgcccgaaaatgaatcgttgacggaatatttaactatggtttcaagtttttcatcgatttctgatgagcttttaagcctggatttaggatctccgacttctgtacattcaagtttttcattctcacctaggagggctaagatttctttaccaaaaagatcagcaatggagctatttcacaaagcaaaagctgttcgtttacagagtcaccatgagaagtacttaacagctgaagaagatgaagaatcagtgactcaagatcgtaacggagcatcaaaaaacgcgaaatggacagttgaatttgttgaaaaaaccgaaaatgttattcgattgaagagttgttatgggaaatatttaacagcttcgaatcagccatttcttctgggtatgactggtagaaaagttcttcaaactttgcctaatcgacttgattcttcaattgaatgggaacccattagagaaggacatcaagttaagctgaggacgagatatgggcaatttttgaggggaaatgggggtcttcctccatggagaaattctgttactcatgatattcctcataggacgaaaactcaagattgggttctttgggatgttcatgttgttgaaattttggcgcattcgacggcggagacggtggcggagacgacggtggtgggtggtaattctgattcgtttgcttctgaatcgagttctgctactactactggttcatcaaaatcttacagcttttcgagacaagagtcaagtgattcattgattagttcaccccctaagttggtagatggaaggcttatatattatcacgttacggatgaatttggagaaattgacgaaggagccgagggactttgcataacttttaagggaaatagtgttgaggatctaaagaagagattggaggaggaaactgggctcgaggatattactgtgtgtactcggagtgctttgaatgggaagctttatcctctccgtttgcagcttcctcccaacaacgcaaatatgaacgttattattttgccatcttcatctaaagaagctagtgatattgcataaccaagaaggccattgtagccctactcgtggagcacttatcgcggattgttgcagtagatggatttttgtatcagtaaaatcgcgtaaacgtgtatctccattgtttattaagcatttgtatataaggttttgagtattcagagagatatacacaatatctgctcttgatgttaatatcatcatcatacatatacacttccacagaataattgaaaattgaaatctggtggagtttttagttcataaaaaaacccaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="66026" stop="59133"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65726" g_stop="65387" g_length="340"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="338" r_length="338" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="65386" i_stop="64783" i_length="604">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="64782" g_stop="64432" g_length="351"/>
          <reference_exon_boundary r_type="cDNA" r_start="339" r_stop="689" r_length="351" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="64431" i_stop="62322" i_length="2110">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62321" g_stop="61719" g_length="603"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="1292" r_length="603" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="61718" i_stop="60553" i_length="1166">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="60552" g_stop="60261" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="1293" r_stop="1584" r_length="292" r_score="0.997"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="60260" i_stop="59698" i_length="563">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.945" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="59697" g_stop="59434" g_length="264"/>
          <reference_exon_boundary r_type="cDNA" r_start="1585" r_stop="1848" r_length="264" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1859" polyA_stop="1873"/>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U321103" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1850</cumulative_length_of_scored_exons>
        <coverage percentage="0.988" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U321103" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65726" e_stop="65387"/>
          <exon e_start="64782" e_stop="64432"/>
          <exon e_start="62321" e_stop="61719"/>
          <exon e_start="60552" e_stop="60261"/>
          <exon e_start="59697" e_stop="59434"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTCCATAATAAATCCATTATTAATATTCCTCTTCAATTTTTTTTTTTTACTTAAATTCCATATATATTCATCACTAATTACAATTTTTTTTTATTAAAATGGATTTTTTCTACAAAGCCAAAGCTGTAAAATTAAAAAGTCATCTAGACAAATACCTTGTAGCCGATGATGATCAAGAAAATATCCGACAAAGCCGAAACGGCTCATCAAGAAAAGCCCGGTGGCTTGTTGAACTTGTTGAAGCCGAAAACAGCCACTTTATACGGCTTAAAAGTGGCTCCGGCAAGTATCTCACGGCTTCCGACGAGCCGTTTCTTCTTGGCATGACCGGAAAAAAGGTAAGTTTTACTTAGAGTAATTATTAATTACAAAATATGTCGTAATTTTAATATTTTTATTTACTTAATTATATTTTTAATACGTTTTGATTAGATAATTTCTTAAATATATTATTGTTGTTATATAAATTATTGAATGTTCTTGATATTAAAAAAAAAAAATCAATAATAAAGGGGTTTGAAATATTGAATTAGGTCACATGTTCTAATTCTAAGTTGTGATTTTTTTTTTCTTTGTTGAATTTTATTATATAAAGTTATTGCTTAAATGTTTTTTTAGATTAACCATGAGTTTTTTTTTTAAAAAAAAATGAATCGTCTTGAGATTTTTGGTTGCGCTTAATTAAAATTTTGATTTTGCTAGTGCTAAGTATTTTTCACTTAAATATAAAAAAAAAATTAAAATGTTTATTTTATTGAATTCTGATTCCGCTAGTGTTCAAATATTTTTCTGATCAAACATGGCTTTTCTTTGAAAAAAAAGAATAGTCTCAAGATTTGACTCGTGTTTTTTATTTATGCTTATTATGTTTAATGATGTAATTGTTTTATTTTTGAAAAAACATTACATATTTTTTTATATATATAATTATATTTTAAATAGGTAATTCAAACTTTGCCCGAAGAAATGAAGGACTTGAGAATCGAATGGGAAGTAATAAGGGATGGATTTCAAGTAAAATTAAGGGGTTTTGGAGGAAAATATTTACGTGCAAATGGAGGAATGCCACCATGGAGAAATAAAGTAACACATGATAATCCATATAGTGGTAGTACACAAAATTGGATTTTGTGGAACGTTGAACCTATTGATGTGCCCGAAAATGAATCGTTGACGGAATATTTAACTATGGTTTCAAGTTTTTCATCGATTTCTGATGAGCTTTTAAGCCTGGATTTAGGATCTCCGACTTCTGTACATTCAAGTTTTTCATTCTCACCTAGGAGGGCTAAGGTATGTTATTTCGTTATGTCAACTTATTATTTTTTTTTTGCGTTTGTATTGCCTTATTGTTTTATTAGGTCATTATTGCGATTTATAATTATTAAATGAGTAAAATGTCTGATTAATTTGAATTCATATAGAAGATCCATTAAATGAAAGACTTAGTATTCGAATCTTGTAATTAAAAATTAAAGATATTATATTGATCCACCATGATTCTAATAATAATTAACATAATTACTAGCTTGTCTTTTGCGTTTAGTGCTAGATCTTTAGATTTATTAGCTAAATGGGAATATGACTAATTACTAATTAGGAAAATTAATACTTCTTTGTAGGAGTTTATGTTACATTTCTATAAACCATAATTAGGTGGAAGTATACTTCACTACGTAACAACTAACAACAAAAAAGGAAGTTGAGATAAAGAAGTAATTAAAAGGATATAATTATGATCGCTAACTCAACTAAAAGAGTTGAGAAAAAGTGGTTAATTAAGTAAAATATCACCATTTTAGTATATTTGGTTAAGCTTTTGAAAATTAAAAATATCTTATTTTAAAAAGTTGATTAGGCTAAACTTAATTTTTCGATAATAACAGAAATTGGAGAAAAAAAACAATTTCTTCTTTGAAGAAAGTAGTTAATTAAGTAAATATCACCATTTTAGTATATTTGATTAAGCTTTTGAAAATTAAAAATATCTTATTTTAAAAAGTTGATTAGGCTAAGCTTAATTTTTCTATAGTAACAGAAGTTGTTTTTTAGAAGTTGAAGAAAAAAAAACAATTTCTTCTTTTGAAGTATTTTTGAGATGATTGTCTGATGCATATTGATGTATTAATATTAAAAAAAAATAAGTTTTTAACTGATTAGTTAAACATAACCTGTAATTCTATTCGAAAAATACTTTTGAATAAAAGAAAAAATAAATTTTCGAAGTTTTACCCAAATTAACTATTAGCTTGAATGTAATTGAGTCCTATAATTTTGTTTAGAAATTGGCTATAGCTTGTTTATTATGTCTTTTGGATAAAAACTTTTTGAAATACATTTTTGTAGAAGGATACAAAATTGACCTACTTTTGATTATTGCCCCATCATTTTTGATATTATTATATTTGAGAAACCTTAGGCTATAATAAAGAATATTCATAACATACACTCCTACTTTTATGAGATAATTAATTACCCTCTTTATCCTTTTCTTGTTCTATAAACCAACAATCTATATTTTAATGATTCTATTAGAATGAGTATAAAAATAAATCAGTCGTAATGAAATGATTGAGATTCTTATCCTATTAATTAAGAATCTCAAATTTCTGTATAATTAAAATAAATATTTTTTTAATATAGGTCAATTTTTTAAATTCATATTGAAATAATTTTAAATATCGAGAATCAAAAAAATTTGACCACAAAGTCTCACAAGATAAATAGAGATGAGACAAACGTTGATCCAAAAAGATTATACAAAGGAAGTAACCTAGAACCTTCATAAAATTAAAAATGTTTTTTTTTGTTTCGATTATTAAAGCTTACTTTATATTAATAATATCGTAAACTTTCTTCTTCGTCTCATTCTAGTCTCATTCTAGAGCCAGAATCAAAAAAAAATTCTTTCAAATTTTAAGTTATATATATGAAAAGTATAAATTTTGTGTTACTCTATCGATATAATTAGATTCTTTTGTGAGGACAATTTACTATTTTTGCACCACCAATCAATTAACCATATAAAAAAAATAAAGTAACCATAATTATCTTTTTAAACAAACTTAACCAAATATGAAAGTGTATTTTTTTTTTCCATTCCTTAATGATCTAATTTTGACCATGTCTAAAAATAGAAAAACTTCAATTAGTAAAAAAAAAAAAAACACATATCTTCACACGTGTCAACCTATATTTTCTCACGTGTCAAATATTTAACGCGCTTTCCTGCGTCTCCCCCATCAAACATGGCTGTCATCATCATAACAAAGAAAAAAACTTCTTCATTATTTCTTCAATTACTATAAAAAATACTCAAGAAAATCCAATCTTTTCTCAACCCCAAGTTTTAAATCCTTAAAATTTTCACAAATTTCATAATTTTTGGTGTTGTTTTTGACAGATTTCTTTACCAAAAAGATCAGCAATGGAGCTATTTCACAAAGCAAAAGCTGTTCGTTTACAGAGTCACCATGAGAAGTACTTAACAGCTGAAGAAGATGAAGAATCAGTGACTCAAGATCGTAACGGAGCATCAAAAAACGCGAAATGGACAGTTGAATTTGTTGAAAAAACCGAAAATGTTATTCGATTGAAGAGTTGTTATGGGAAATATTTAACAGCTTCGAATCAGCCATTTCTTCTGGGTATGACTGGTAGAAAAGTTCTTCAAACTTTGCCTAATCGACTTGATTCTTCAATTGAATGGGAACCCATTAGAGAAGGACATCAAGTTAAGCTGAGGACGAGATATGGGCAATTTTTGAGGGGAAATGGGGGTCTTCCTCCATGGAGAAATTCTGTTACTCATGATATTCCTCATAGGACGAAAACTCAAGATTGGGTTCTTTGGGATGTTCATGTTGTTGAAATTTTGGCGCATTCGACGGCGGAGACGGTGGCGGAGACGACGGTGGTGGGTGGTAATTCTGATTCGTTTGCTTCTGAATCGAGTTCTGCTACTACTACTGGTTCATCAAAATCTTACAGCTTTTCGAGACAAGAGGTATTACTTCAATTTTTACATTCAATTTATATAAAGTTTGAAATTTGACCTTATGAGGTTCGTTGGGAATCGTAATAGCTCAGTTAGTTTGGTATTTGACTTTGGCCTTATGGGGTTCGTTGGGAATTGCAGTAGCTCAGTTAGTTGGTAATTGAACTTTGACCTTATGGGGTTGGTATTTGAACTTTGACCTTGTGGGTTCGTTGGGAATCGTAATAGCTGAGTTGGTTGGTATTTGAACTTTGACCTTATGGGGTTCATTGGAAATCGTATTAGCTCAGTTAGTTGGTATTTGAACTTTGACCTTATGAGGTTCGTTCGGAATTGTAGTAGCTCAGTTAGTTGGTATTTGAACTTTGGCCTTATGGGGTTAGTTGGGAATCGTAGTAGCTCAGTTAGTTGGTATATGAACTTTTGACCTTATGGGGTTCGTTGGGAATCGCAGTAGCTCTGATAGTTGGTATTTTAACTTTGACCTTGTTGGTGAGGGTTTGATTAAGTACATTGTATTCTCCTCTTCATTTCGGGTTATTTGTGTCCCAATTAAGGAAAAAAAACATTTTTCAATTAGCAAATTGGTTTGTTGTTGATATGGACTTTAAGGGGGTTGGTTTGATCCATAATTCAGGATAGAAGTTGGGATTACGTTGTTTGTTGTTTGGTTATGAGGAGTAGCTACTCCCTCCATCTGTCCCAATTTACTAGATGTAGTTTGACTCAACGCAGAGTTTAAGAAGAAAAGAAAGACTTTTGAAAATTATGATTTTAAGTAAGTGTTTGTGTGGCTATGGATCATCTTATTAAGGATGAATGAAATGAATATTTTGAAGTTAAGTTGTTACTGAATAAAGAACTATGTTGTTTTTTTTGGAATTAATATAAAATTAGGCTCGATAGCAATTTGGTTTGGAGCCTTGTTATGGTTGTGGACAAATACGAGATCATTTGTTATATGACTTGGTCTCGTATTGTATTCGAGTGTGTTTACCCTTTTGGCTTATGACCATTAGGAGTGTTCTTTTAACATATTGGTGTTCGAGTCAACTTATATTATCACTTGCTATAATCAATAGATAGAAGTGTCGGTTGAACTTGTTAATTTGGAATCGGAATTCAATAATTATTATGTTATGATACTCAATTATCTTTTTTCTTTCTTTTGGCAGTCAAGTGATTCATTGATTAGTTCACCGCCTAAGTTGGTAGATGGAAGGCTTATATATTATCACGTTACGGATGAATTTGGAGAAATTGACGAAGGAGCCGAGGGACTTTGCATAACTTTTAAGGGAAATAGTGTTGAGGATCTAAAGAAGAGATTGGAGGAGGAAACTGGGCTCGAGGATATTACTGTGTGTACTCGGAGTGCTTTGAATGGGAAGCTTTATCCTCTCCGTTTGCAGCTTCCTCCCAACAACGCAAATATGAACGTTATTATTTTGCCATCTTCATCTAAAGGTGAGCCTTTTACTCTTCTACTTGGTCTTAAAACTTTGGTTTCATTTCGTGAAAGTTTGAAATTTTAGATCCATCGTTCTGTTTGAGAATTTTGTTTCATAACGAACTTATAAACGTTTATAGCAATCAAAATAATACTATTGATGCTATTGACCCTTCACCTTCCATTTGGAATCAACCAAAATCACTAATGTCTCGTTGAATCATTCACGCCTCCGTTCTTGAATAAAACATCATCAATGCCAGCCCTTGATTGCCTTCTAACCAACATAACATAAACCAATTAAGAAACTTACTCAATGCTCGTCTTAAGCTTACTTTGTTGCATCATTTTGGCTGTCAATTGATGGCTTGAATGCTCGTTCGAGGGTATCAATTGATGACACAAGTGCTTAGTTTGAGAGTACTTCTTGTGTTCTGTAAGCCACGCGAGCTCATCATTCTTACCGCGTTACATAACTGTAGCAGTTGTTGAGTCCCATACACAATGAAGCTTATCTTACTATACTTTGAATTCGTCTTCATTGTTAACGTGTTAATCTTCGTGTTATGGCATGTTTCAGAAGCTAGTGATATTGCATAACCAAGAAGGCCATTGTAGCCCTACTCGTGGAGCACTTATCGCGGATTGTTGCAGTAGATGGATTTTTGTATCAGTAAAATCGCGTAAACGTGTATCTCCATTGTTTATTAAGCATTTGTATATAAGGTTTTGAGTATTCAGAGAGATATACACAATATCTGCTCTTGATGTTAATATCATCATCATACATATACACTTCCACAGAATAATTGAAAATTGAAATCTGGTGGAGTTTTTAGTTCAT</genome_strand>
        <mrna_strand>CTTTCCATAATAAATCCATTATTAATATTCCTCTTCAATTTTTTTTTTTTACTTAAATTCCATATATATTCATCACTAATTACAATTTTTTTTTATTAAAATGGATTTTTTCTACAAAGCCAAAGCTGTAAAATTAAAAAGTCATCTAGACAAATACCTTGTAGCCGATGATGATCAAG--AATATCCGACAAAGCCGAAACGGCTCATCAAGAAAAGCCCGGTGGCTTGTTGAACTTGTTGAAGCCGAAAACAGCCACTTTATACGGCTTAAAAGTGGCTCCGGCAAGTATCTCACGGCTTCCGACGAGCCGTTTCTTCTTGGCATGACCGGAAAAAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTAATTCAAACTTTGCCCGAAGAAATGAAGGACTTGAGAATCGAATGGGAAGTAATAAGGGATGGATTTCAAGTAAAATTAAGGGGTTTTGGAGGAAAATATTTACGTGCAAATGGAGGAATGCCACCATGGAGAAATAAAGTAACACATGATAATCCATATAGTGGTAGTACACAAAATTGGATTTTGTGGAACGTTGAACCTATTGATGTGCCCGAAAATGAATCGTTGACGGAATATTTAACTATGGTTTCAAGTTTTTCATCGATTTCTGATGAGCTTTTAAGCCTGGATTTAGGATCTCCGACTTCTGTACATTCAAGTTTTTCATTCTCACCTAGGAGGGCTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ATTTCTTTACCAAAAAGATCAGCAATGGAGCTATTTCACAAAGCAAAAGCTGTTCGTTTACAGAGTCACCATGAGAAGTACTTAACAGCTGAAGAAGATGAAGAATCAGTGACTCAAGATCGTAACGGAGCATCAAAAAACGCGAAATGGACAGTTGAATTTGTTGAAAAAACCGAAAATGTTATTCGATTGAAGAGTTGTTATGGGAAATATTTAACAGCTTCGAATCAGCCATTTCTTCTGGGTATGACTGGTAGAAAAGTTCTTCAAACTTTGCCTAATCGACTTGATTCTTCAATTGAATGGGAACCCATTAGAGAAGGACATCAAGTTAAGCTGAGGACGAGATATGGGCAATTTTTGAGGGGAAATGGGGGTCTTCCTCCATGGAGAAATTCTGTTACTCATGATATTCCTCATAGGACGAAAACTCAAGATTGGGTTCTTTGGGATGTTCATGTTGTTGAAATTTTGGCGCATTCGACGGCGGAGACGGTGGCGGAGACGACGGTGGTGGGTGGTAATTCTGATTCGTTTGCTTCTGAATCGAGTTCTGCTACTACTACTGGTTCATCAAAATCTTACAGCTTTTCGAGACAAGAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCAAGTGATTCATTGATTAGTTCACCCCCTAAGTTGGTAGATGGAAGGCTTATATATTATCACGTTACGGATGAATTTGGAGAAATTGACGAAGGAGCCGAGGGACTTTGCATAACTTTTAAGGGAAATAGTGTTGAGGATCTAAAGAAGAGATTGGAGGAGGAAACTGGGCTCGAGGATATTACTGTGTGTACTCGGAGTGCTTTGAATGGGAAGCTTTATCCTCTCCGTTTGCAGCTTCCTCCCAACAACGCAAATATGAACGTTATTATTTTGCCATCTTCATCTAAAG...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGCTAGTGATATTGCATAACCAAGAAGGCCATTGTAGCCCTACTCGTGGAGCACTTATCGCGGATTGTTGCAGTAGATGGATTTTTGTATCAGTAAAATCGCGTAAACGTGTATCTCCATTGTTTATTAAGCATTTGTATATAAGGTTTTGAGTATTCAGAGAGATATACACAATATCTGCTCTTGATGTTAATATCATCATCATACATATACACTTCCACAGAATAATTGAAAATTGAAATCTGGTGGAGTTTTTAGTTCAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319343" ref_strand="+" ref_description="SGN-U319343        Tomato 200607 #1 [14 ESTs aligned] arabidopsis/peptide: AT1G27150.1 | Symbol: None | expressed protein | chr1:9429044-9432235 FORWARD | Aliases: T7N9.21, T7N9_21 (evalue: 2e-107, score=386) genbank/nr: gi|18396209|ref|NP_564271.1| expressed protein [Arabidopsis thaliana] gi|8778861|gb|AAF79860.1| T7N9.21 [Arabidopsis thaliana](evalue: 1e-105, score=386)">
      <seq>tgatttgtctctgaaacttgttgaacaggtcctaccagtaaataaacatggaagatacatttatggcatgctcgcatttgccctattggagcttggtcgatatgcggaggcaaaagaagctgcaaagaaaggctttgagattgatagtgaagatgcctggacacaccatgctctctgtcatgtttatcagtatgagtgtcgttttaaagaagcagtacaatttatggaggagtgctcaagaacctggagttctttgtcatcttttatgtatacacacaattggtggcatgttgcgctttgttatatggaaggtcattcgcccatggaaaaagtaagagatgtttatgatcaaaacatctggaaagagttggaaagaattgatgccagtttagccgaagtgtacttgaatgctgttggtttgttactccgggtatatttacgaggtgggattaatatatttggggaccgtttaaagatcctagctgatcgtctgacagataaagcattctggtatcttgaatggcacctggatgtattggtgttatgggccctatcctatacaggcgaagtttctaaagcagaagagttactcgagggtttgaagtccagaatttctaccatgaccaagaaaaaacgagaatatatgcaaagagctgtgctgcttgcagaagtgttattcgaatatggtaagggtgaaaatgaacgggcattggaattgctcggacaaacatttgatgccattgactacaagattattggagcatcagacgagcagcttgatgtttttaatgaagtttggatcactatgttgctaaacagtggtcgggctacaaaagctattgaggcaatagagatgcagctaaaaaagagggaaggaaccccgttcttgtggcgcctcctggaaaaaggttattcatcaatgtcaagaaaccaagaagctatacaagcaggcaaaaaagctcagtcattggaaggtgcatacttcaactaatcttggcaaaaggatgataactatccaaaataaactcttttgcacacctctcaaatgttagtgattttcacctcttgtatccctctcctctagtagaatgtgtagtaaagtctctccatgttgtgtatttataagcagtgtccccccaagccaattctatcgttggtgagggcggagacacttgtagggagaacaagactcaaaactcggaagtccttaaataatctctttttttcataacggtgatattcagatcagattgttgatttcatgtacatgttatctttcaccagcacaggtagagaagaacttacaaaatcttgaataaatgaagtagtattttgatttgtcaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="80182" stop="74783"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="79882" g_stop="79855" g_length="28"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="28" r_length="28" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="79854" i_stop="79633" i_length="222">
            <donor d_prob="0.979" d_score="0.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="79632" g_stop="79489" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="172" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="79488" i_stop="78926" i_length="563">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.625" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="78925" g_stop="78831" g_length="95"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="267" r_length="95" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="78830" i_stop="78749" i_length="82">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.606" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="78748" g_stop="78619" g_length="130"/>
          <reference_exon_boundary r_type="cDNA" r_start="268" r_stop="397" r_length="130" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="78618" i_stop="78542" i_length="77">
            <donor d_prob="0.958" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="78541" g_stop="78437" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="398" r_stop="502" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="78436" i_stop="77890" i_length="547">
            <donor d_prob="0.458" d_score="1.00"/>
            <acceptor a_prob="0.681" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="77889" g_stop="77783" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="503" r_stop="609" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="77782" i_stop="77709" i_length="74">
            <donor d_prob="0.685" d_score="1.00"/>
            <acceptor a_prob="0.943" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="77708" g_stop="77657" g_length="52"/>
          <reference_exon_boundary r_type="cDNA" r_start="610" r_stop="661" r_length="52" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="77656" i_stop="77061" i_length="596">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="77060" g_stop="76971" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="662" r_stop="751" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="76970" i_stop="76878" i_length="93">
            <donor d_prob="0.978" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="76877" g_stop="76793" g_length="85"/>
          <reference_exon_boundary r_type="cDNA" r_start="752" r_stop="836" r_length="85" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="76792" i_stop="76393" i_length="400">
            <donor d_prob="0.956" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="76392" g_stop="76328" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="837" r_stop="901" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="10">
          <gDNA_intron_boundary i_start="76327" i_stop="75533" i_length="795">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.985" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="11">
          <gDNA_exon_boundary g_start="75532" g_stop="75083" g_length="450"/>
          <reference_exon_boundary r_type="cDNA" r_start="902" r_stop="1351" r_length="450" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U319343" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1351</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319343" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="79882" e_stop="79855"/>
          <exon e_start="79632" e_stop="79489"/>
          <exon e_start="78925" e_stop="78831"/>
          <exon e_start="78748" e_stop="78619"/>
          <exon e_start="78541" e_stop="78437"/>
          <exon e_start="77889" e_stop="77783"/>
          <exon e_start="77708" e_stop="77657"/>
          <exon e_start="77060" e_stop="76971"/>
          <exon e_start="76877" e_stop="76793"/>
          <exon e_start="76392" e_stop="76328"/>
          <exon e_start="75532" e_stop="75083"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGATTTGTCTCTGAAACTTGTTGAACAGGTTCATACCATATTGACTAAATATTGCCTTGACTTCTTCCTCTCCTAGACAACTTAAGAAACAAAATCAATAAAATAAATATGTAATAACTTGTATTAGACATTATATCTGGAGGTTGAGTATCCATAATAGGAGTGACTAATGTGGTCATTTCTTTAAAAGTGAGTTTCGATTCCTTTTATGCAATTATTCCTAGTAAAGTTTCTTGATTTTGTCCTACAGGTCCTACCAGTAAATAAACATGGAAGATACATTTATGGCATGCTCGCATTTGCCCTATTGGAGCTTGGTCGATATGCGGAGGCAAAAGAAGCTGCAAAGAAAGGCTTTGAGATTGATAGTGAAGATGCCTGGACACACCATGCTGTGAGTTACTCCTGTTTGCAAGTTACTCTTTCCTTTCTAGCTGATACAAACACATTTGTGGTATTATATGTGCTTGAATTTACTCTGCAAAATTTATCAACTATAACTATTTCTATGCCTCACTACCAAACTAGTTGGATTGGCTCCGCCAAAAAGCTTGTTTATCCCTATATTTCCATATAAGCATCCAAACCAGAAAGTGGTTACAAAGGTTGCTGGCAAACACCAGACCAAGCTCGTGAAAATCTTCTGCACAGAACAAACCGTGTAATTGTACCATTAACCTCTATCCCAACTAGTGAAATATCCATTGCACATTACAAACTTTTAATTGCTAGTCCAGTCATCATAATACTACAGATAGTTAACAAAGGTCCCATTTGAGGGAATCTCTTCCTATTGTTTTATCCTAGGAGAAAAAGAATAAGCATGGACATAATTTTTTATTGTGATGGAATTGGCGGTGTAGTTTGTATCATTTTGTCGGAGGAAATGCATTTTATTCATTCACTGATATTCTAGCATCCTATTTTTTTGCTTATTTTATCACAATCTCCTTGCAGCTCTGTCATGTTTATCAGTATGAGTGTCGTTTTAAAGAAGCAGTACAATTTATGGAGGAGTGCTCAAGAACCTGGAGTTCTTTGTCATCTTTTATGTATGCGCAGAATCTGATAAAAGCACTCCTAGTTCGGCTCTGAATATAGTATTTTTAAAAGCTAACCATTAGGATATTGCAGGTATACACACAATTGGTGGCATGTTGCGCTTTGTTATATGGAAGGTCATTCGCCCATGGAAAAAGTAAGAGATGTTTATGATCAAAACATCTGGAAAGAGTTGGAAAGAATTGATGCCAGTTTAGCCGAAGTAAGTTAGTTGTTTGTAGTCAAAGAGCATTTTAGTTCTTTAAATATGCTGAGAGTTACATTTTTCTTGGTATGCAGGTGTACTTGAATGCTGTTGGTTTGTTACTCCGGGTATATTTACGAGGTGGGATTAATATATTTGGGGACCGTTTAAAGATCCTAGCTGATCGTCTGACAGATAAAGTGAGTTCAGGTGCAGAAGCATGTGAATTTCTGTTTTTAGGTTATTAGGATAATTGCATGCATATTCACTTAAGTTGGGATATGTATGTCTTTCCTACCTTTGAAATGTGGAAAATCGGATGACAAGCTAGTTTGTTTAGCTAATCATCAAAGACTTCATGAAAAAATATGGAACAAATTTAATATACTTGTTATTATTGTGAAATGAAAGGTGTTGATTTAAGTTATTTAACAATACATGCTTTTAGAAAGGTCCTCCGTAACCCCATACTAAATAGAATAAAACTGATGAAGAAAATCTTCAATCAGTTGAGAAAATAGATAAATGATATGAATCAGGTTTCGTTCTTTCAGTGTCATTTGCTTTTTCATGAATCATTTCCTTTCAGATTAATGTTAATGATACTTCGGATTGGAACTGTAAACTTGATCTGCATTACTATGAACTTCCATTTAGCAATTACATTGTGCGGTCCTCTTCCCCTTCTGTCTATACAATGTAATAAAAACTAAATGTTGTTTCTTTGTGCTGCCACTTCTATATTAGGCATTCTGGTATCTTGAATGGCACCTGGATGTATTGGTGTTATGGGCCCTATCCTATACAGGCGAAGTTTCTAAAGCAGAAGAGTTACTCGAGGGTTTGAAGTCCAGGTCAGGATGGCTCTTTCCAATCTCATAACTATGCTGTGTCCAACGTACTCTGATAATTTTGTGCTTTCCTGTAGAATTTCTACCATGACCAAGAAAAAACGAGAATATATGCAAAGAGCTGTGCTGGTTTGTCCCTTTTTCTATTTACTGAATTCTTCATTACTTCTTGGAGAAAATGTTTCACAATTTCTTTCCTCTTTCAATAGCAAAAGATTCTTTTTTATTTAATACTAAAAGATTTTCCTAATGCGTTTTACTGTCTTTACAACTTGGGCCTTTTTTAGACCCAAAGGATTCATTCTGCTGATTGCTGTTGGGAGATGAAAACATAGTGCTGTTTAAACTTACTCCCTCTGTTTCAGTTTGTTTGTTTGGTTTCAAGATTTATAAGACACTTGAATCTTGTGATCACTAATATGCGTAGAAGGTACCAAAATGTCATTTAATCTTGTGGCCGTAAACATTAACATGCCATGTTGAAAGTTAGAATAAAAGAGTTGCCAAAAAAAGGAAGACATTCTTTTTAAAACAGATTAAAAAGGAAAGTAAAACAAACAAATTTTAATGGAGGGAGTATTGATTATACTGTTGCTTGATTCTCGTGCCAATCACATCTTTGAAAATATTGATTCATTTAATAATTGTACGCTTGATATTTGATAGATAAAAACTGTTTCTTTCAATTTTTAACTTTTAATTCTTTCTTTACATTTTTATTTTAGCTTGCAGAAGTGTTATTCGAATATGGTAAGGGTGAAAATGAACGGGCATTGGAATTGCTCGGACAAACATTTGATGCCATTGACTACAAGGTAGTTTGAACATGAACAAGGGGTACTCATGCAGTTTGTTTAGCATTATTTTATTTGTTTCATGAATGATTAGCAAAATACTACCTTGTGCAGATTATTGGAGCATCAGACGAGCAGCTTGATGTTTTTAATGAAGTTTGGATCACTATGTTGCTAAACAGTGGTCGGGCTACAAAAGGTTAGATCATTTGGCTTCCATTTTGAAAGAAATTCTTATTAGAGGTTTCCGGTGGTGGTGATAGTTTTTATTCCTGTAAAATGGAGTATGGCCTCTTTAAGAACAACAACTACAACATTCCCAGTGTAATCCCACAAATGAGGTCGGGGAAGATTAGGATGTACGCAGACCTCACCCCTACCTTTGTGAGGTAGGAAGGTTGTCTCTTATAGACCGTCAGCTCAAGAGCAGTCAAAGTAGGGTTGCGAGAAAAAGTATGGCCTCTTTGATAAAGAAGGAAATTTGATCCTAGGATCTCTCTGCTACCCTTCAAACCTCACTCTTTGGTATACACTTATTTTTGTCTAATCTTAAAAGTTCGTAGTCACTTATCCTTGAGTTGTGGTTTTGGAACTCGCAGCTATTGAGGCAATAGAGATGCAGCTAAAAAAGAGGGAAGGAACCCCGTTCTTGTGGCGCCTCCTGGTACGTCTTGGCTCTCTGATCCATTATTTTAGCTTCTAAGATGAGTATATTGTTCAGGAATAACTGCACTTTTCACTGCCATCTCTGAGGATTAGCGCTCCTTATCCAGGTGTTTAAATTGCCTCACATAAGCCTTTATTCTTTTCTAACATGCATCGACAAATCATATCGATAATGGTCTATCAAATACGTACCTCGTGGATTGCAAATTCTACTATGAATTACTTTTTACCTCGACTTTGTATCTCCAAATTCTGCAGTAAATTCAGAGTGTTTTATGTATATATGAAGGTGAGATGGAAAAAATGTACCAATAAAGAGTGTTCTTTCTTGTACATATGCAATTACAAGTATAAGCACATTCCAAGTATAAAATATCCTATGCTTCAATACTCCATATTTAATGTCTTCATAAGGTTTCTGAAGGCTCAAATTTGATGCTATCAAGTTGTAAGGCATAGAGTACTAGTTGCATATTAAGGAGGACCAAAAATAAGTCGGCGCATGCACGATGTAGAATGAGAAGTTTCTTCTGTTCTTTTATTAATTGACTTATGTATCAGATTCCATCCACCCTACAGTCGACGATAATGATTGGCTCTATCTATGAAGATATTGATTTTGTTCACAATAATCAAATTATATCTGGCCTTGTTTACACCTTTCTAGTCATTCTCGATAAATCATTGTTCATCTTTCTCTCCTCTTGCTCGACAAACCAACTTTTCAAGCCTTGATTTGTCCTCCGCGAGAAGGAATTGGATTATAATGTATAACTGTTGCTTGTTGGTTCAGGAAAAAGGTTATTCATCAATGTCAAGAAACCAAGAAGCTATACAAGCAGGCAAAAAAGCTCAGTCATTGGAAGGTGCATACTTCAACTAATCTTGGCAAAAGGATGATAACTATCCAAAATAAACTCTTTTGCACACCTCTCAAATGTTAGTGATTTTCACCTCTTGTATCCCTCTCCTCTAGTAGAATGTGTAGTAAAGTCTCTCCATGTTGTGTATTTATAAGCAGTGTCCCCCCAAGCCAATTCTATCGTTGGTGAGGGCGGAGACACTTGTAGGGAGAACAAGACTCAAAACTCGGAAGTCCTTAAATAATCTCTTTTTTTCATAACGGTGATATTCAGATCAGATTGTTGATTTCATGTACATGTTATCTTTCACCAGCACAGGTAGAGAAGAACTTACAAAATCTTGAATAAATGAAGTAGTATTTTGATTTGTCAATGAAATA</genome_strand>
        <mrna_strand>TGATTTGTCTCTGAAACTTGTTGAACAG..............................................................................................................................................................................................................................GTCCTACCAGTAAATAAACATGGAAGATACATTTATGGCATGCTCGCATTTGCCCTATTGGAGCTTGGTCGATATGCGGAGGCAAAAGAAGCTGCAAAGAAAGGCTTTGAGATTGATAGTGAAGATGCCTGGACACACCATGCT...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTCTGTCATGTTTATCAGTATGAGTGTCGTTTTAAAGAAGCAGTACAATTTATGGAGGAGTGCTCAAGAACCTGGAGTTCTTTGTCATCTTTTAT..................................................................................GTATACACACAATTGGTGGCATGTTGCGCTTTGTTATATGGAAGGTCATTCGCCCATGGAAAAAGTAAGAGATGTTTATGATCAAAACATCTGGAAAGAGTTGGAAAGAATTGATGCCAGTTTAGCCGAA.............................................................................GTGTACTTGAATGCTGTTGGTTTGTTACTCCGGGTATATTTACGAGGTGGGATTAATATATTTGGGGACCGTTTAAAGATCCTAGCTGATCGTCTGACAGATAAA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GCATTCTGGTATCTTGAATGGCACCTGGATGTATTGGTGTTATGGGCCCTATCCTATACAGGCGAAGTTTCTAAAGCAGAAGAGTTACTCGAGGGTTTGAAGTCCAG..........................................................................AATTTCTACCATGACCAAGAAAAAACGAGAATATATGCAAAGAGCTGTGCTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCAGAAGTGTTATTCGAATATGGTAAGGGTGAAAATGAACGGGCATTGGAATTGCTCGGACAAACATTTGATGCCATTGACTACAAG.............................................................................................ATTATTGGAGCATCAGACGAGCAGCTTGATGTTTTTAATGAAGTTTGGATCACTATGTTGCTAAACAGTGGTCGGGCTACAAAAG................................................................................................................................................................................................................................................................................................................................................................................................................CTATTGAGGCAATAGAGATGCAGCTAAAAAAGAGGGAAGGAACCCCGTTCTTGTGGCGCCTCCTG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAAAAGGTTATTCATCAATGTCAAGAAACCAAGAAGCTATACAAGCAGGCAAAAAAGCTCAGTCATTGGAAGGTGCATACTTCAACTAATCTTGGCAAAAGGATGATAACTATCCAAAATAAACTCTTTTGCACACCTCTCAAATGTTAGTGATTTTCACCTCTTGTATCCCTCTCCTCTAGTAGAATGTGTAGTAAAGTCTCTCCATGTTGTGTATTTATAAGCAGTGTCCCCCCAAGCCAATTCTATCGTTGGTGAGGGCGGAGACACTTGTAGGGAGAACAAGACTCAAAACTCGGAAGTCCTTAAATAATCTCTTTTTTTCATAACGGTGATATTCAGATCAGATTGTTGATTTCATGTACATGTTATCTTTCACCAGCACAGGTAGAGAAGAACTTACAAAATCTTGAATAAATGAAGTAGTATTTTGATTTGTCAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346960" ref_strand="+" ref_description="SGN-U346960        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G27150.1 | Symbol: None | expressed protein | chr1:9429044-9432235 FORWARD | Aliases: T7N9.21, T7N9_21 (evalue: 1e-45, score=180) genbank/nr: gi|13605637|gb|AAK32812.1| At1g27150/T7N9_21 [Arabidopsis thaliana] gi|27363406|gb|AAO11622.1| At1g27150/T7N9_21 [Arabidopsis thaliana](evalue: 7e-44, score=180)">
      <seq>aacccaccaacttcaagaaaatggaagaattcaaagtagacaaatggggttatcaagtgaagactagttctgattcttgcatatctgccattaattcttattatcatcaggtacttagctatggaagagagaggtcagttatattggaagctccaaaacaagacccaacttgtgttttggctaatattttggctgctcattttctttgttctgctgattcttcgcgtgctatgccacttcttgaagctgccaagtcttgtctagtacaaattttgcaactttttggtttgtatttttgtatttgggagtttggttttgcttatttgatgttaattttctttgtttaggaacaagctagcttgtatgagaaagtggtttttgaggtagtaagttatttgattttacctaatacagatgatgatgtggctgt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="81522" stop="80358"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="81222" g_stop="81113" g_length="110"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="110" r_length="110" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="81112" i_stop="80978" i_length="135">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="80977" g_stop="80658" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="111" r_stop="430" r_length="320" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U346960" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>430</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346960" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="81222" e_stop="81113"/>
          <exon e_start="80977" e_stop="80658"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACCCACCAACTTCAAGAAAATGGAAGAATTCAAAGTAGACAAATGGGGTTATCAAGTGAAGACTAGTTCTGATTCTTGCATATCTGCCATTAATTCTTATTATCATCAGGTACCTTTTTCATATTTTCTTGATTTTTATCAGTATGAGTAAAAAAGATCAGATTTTTATCAGTATTGAGTAGAAAGATTAGATTTTTATTGATTTTGGGTTTATGTGAACTTTGATTCTTGAGGTTTGGTTTAGGTACTTAGCTATGGAAGAGAGAGGTCAGTTATATTGGAAGCTCCAAAACAAGACCCAACTTGTGTTTTGGCTAATATTTTGGCTGCTCATTTTCTTTGTTCTGCTGATTCTTCGCGTGCTATGCCACTTCTTGAAGCTGCCAAGTCTTGTCTAGTACAAATTTTGCAACTTTTTGGTTTGTATTTTTGTATTTGGGAGTTTGGTTTTGCTTATTTGTTGTTAATTTTCTTTGTTTAGGAACAAGCTAGCTTGTATGAGAAAGTGGTTTTTGAGGTAGTAAGTTATTTGATTTTACCTAATAGAGATGATGATGTGGCTGT</genome_strand>
        <mrna_strand>AACCCACCAACTTCAAGAAAATGGAAGAATTCAAAGTAGACAAATGGGGTTATCAAGTGAAGACTAGTTCTGATTCTTGCATATCTGCCATTAATTCTTATTATCATCAG.......................................................................................................................................GTACTTAGCTATGGAAGAGAGAGGTCAGTTATATTGGAAGCTCCAAAACAAGACCCAACTTGTGTTTTGGCTAATATTTTGGCTGCTCATTTTCTTTGTTCTGCTGATTCTTCGCGTGCTATGCCACTTCTTGAAGCTGCCAAGTCTTGTCTAGTACAAATTTTGCAACTTTTTGGTTTGTATTTTTGTATTTGGGAGTTTGGTTTTGCTTATTTGATGTTAATTTTCTTTGTTTAGGAACAAGCTAGCTTGTATGAGAAAGTGGTTTTTGAGGTAGTAAGTTATTTGATTTTACCTAATACAGATGATGATGTGGCTGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U324385" ref_strand="+" ref_description="SGN-U324385        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione S-transferase, putative, similar to glutathione S-transferase (sp:Q03666:GTX4_TOBAC); similar to EST gb:H36275 gb:AB039930. | chr1:3395560-3396851 REVERSE | Aliases: F14N23.24, F14N23_24(evalue: 5e-69, score=257) genbank/nr: gi|9957262|gb|AAG09294.1| unknown [Petroselinum crispum](evalue: 3e-72, score=274)">
      <seq>ctcgtgccgaattcggcacgagggcaagaagcatcaaaaactctgcttattagtcattctttcaatatttgttgttgaagaagctagtcatggcaacaaatagtgtaaagcttctaggtacatgggcatgcccgtatgtgtatcgcgttgaaatagccctcaagatgaagtctattgagtatgagtttatacaagaacgtgtgtttaacaaaagtgagttgcttctcaaatccaatcctgtttacaagaaaatcccagttctgttccacgacgagaagcctatctgtgagtcccttgtcatccttcagtacatcgatgaagcttggcttaatggtcccgccattcttccttctgatccctatgatcgtgccatagcacgattttgggcagcctatatagatgaaaagtggtatccattggtagcggattataggaacgtggaaggaaaggaagcaaaagcagctatggtggagaaaatttctgaagggactttgctgctggaggaagcttttatcaacatgagcaaaggtaaatcttactttggtggagatagtattggttatgttgacattgtttttggtagtttactcggatgggttaaggtaatcgagatcgtggatgaattgaagatactagacgaaacaaagacgcctagcctagctgaatgggatgagaaattttgctcgcacaatgtcgtaaaggatatcattccagagactgaaaaacttgtgggaatttatcacaagtatgtcgagttgaagaaagctaacttgagttgataatgttgctgatttttctttatct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="85091" stop="83464"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="84789" g_stop="84406" g_length="384"/>
          <reference_exon_boundary r_type="cDNA" r_start="24" r_stop="407" r_length="384" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="84405" i_stop="84161" i_length="245">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="84160" g_stop="83764" g_length="397"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="804" r_length="397" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U324385" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>781</cumulative_length_of_scored_exons>
        <coverage percentage="0.971" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U324385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="84789" e_stop="84406"/>
          <exon e_start="84160" e_stop="83764"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAGAAGCATCAAAAACTCTGCTTATTAGTCATTCTTTCAATATTTGTTGTTGAAGAAGCTAGTCATGGCAACAAATAGTGTAAAGCTTCTAGGTACATGGGCATGCCCGTATGTGTATCGCGTTGAAATAGCCCTCAAGATGAAGTCTATTGAGTATGAGTTTATACAAGAACGTGTGTTTAACAAAAGTGAGTTGCTTCTCAAATCCAATCCTGTTTACAAGAAAATCCCAGTTCTGTTCCACGACGAGAAGCCTATCTGTGAGTCCCTTGTCATCCTTCAGTACATCGATGAAGCTTGGCTTAATGGTCCCGCCATTCTTCCTTCTGATCCCTATGATCGTGCCATAGCACGATTTTGGGCAGCCTATATAGATGAAAAGGTAAACACCTAAACTTCATTTGCAACTTATAAGAAACAACCTCTCTATCTCTAACGTAGAGGTAAGGTTTGTTTACACTCTACCCTCCTCAGACCCCACTTTGTGAGACTACAGTATGTTGTAGTTGAATTTGTAACTACTAAGCTTGATATGTTGTTTGTGGTTAATTTCACGTATGATCACTGAACGTTACCATGCTTGAAAAGTCGTTTAGATGAGTAGTTAACTTCATCAAATGGTTGCAGTGGTATCCATTGGTAGCGGATTATAGGAACGTGGAAGGAAAGGAAGCAAAAGCAGCTATGGTGGAGAAAATTTCTGAAGGGACTTTGCTGCTGGAGGAAGCTTTTATCAACATGAGCAAAGGTAAATCTTACTTTGGTGGAGATAGTATTGGTTATGTTGACATTGTTTTTGGTAGTTTACTCGGATGGGTTAAGGTAATCGAGATCGTGGATGAATTGAAGATACTAGACGAAACAAAGACGCCTAGCCTAGCTGAATGGGATGAGAAATTTTGCTCGCACAATGTCGTAAAGGATATCATTCCAGAGACTGAAAAACTTGTGGAAATTTATCACAAGTATGTCGAGTTGAAGAAAGCTAACTTGAGTTGATAATGTTGCTGATTTTTCTTTATCT</genome_strand>
        <mrna_strand>GCAAGAAGCATCAAAAACTCTGCTTATTAGTCATTCTTTCAATATTTGTTGTTGAAGAAGCTAGTCATGGCAACAAATAGTGTAAAGCTTCTAGGTACATGGGCATGCCCGTATGTGTATCGCGTTGAAATAGCCCTCAAGATGAAGTCTATTGAGTATGAGTTTATACAAGAACGTGTGTTTAACAAAAGTGAGTTGCTTCTCAAATCCAATCCTGTTTACAAGAAAATCCCAGTTCTGTTCCACGACGAGAAGCCTATCTGTGAGTCCCTTGTCATCCTTCAGTACATCGATGAAGCTTGGCTTAATGGTCCCGCCATTCTTCCTTCTGATCCCTATGATCGTGCCATAGCACGATTTTGGGCAGCCTATATAGATGAAAAG.....................................................................................................................................................................................................................................................TGGTATCCATTGGTAGCGGATTATAGGAACGTGGAAGGAAAGGAAGCAAAAGCAGCTATGGTGGAGAAAATTTCTGAAGGGACTTTGCTGCTGGAGGAAGCTTTTATCAACATGAGCAAAGGTAAATCTTACTTTGGTGGAGATAGTATTGGTTATGTTGACATTGTTTTTGGTAGTTTACTCGGATGGGTTAAGGTAATCGAGATCGTGGATGAATTGAAGATACTAGACGAAACAAAGACGCCTAGCCTAGCTGAATGGGATGAGAAATTTTGCTCGCACAATGTCGTAAAGGATATCATTCCAGAGACTGAAAAACTTGTGGGAATTTATCACAAGTATGTCGAGTTGAAGAAAGCTAACTTGAGTTGATAATGTTGCTGATTTTTCTTTATCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319518" ref_strand="+" ref_description="SGN-U319518        Tomato 200607 #1 [11 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione S-transferase, putative, similar to glutathione S-transferase (sp:Q03666:GTX4_TOBAC); similar to EST gb:H36275 gb:AB039930. | chr1:3395560-3396851 REVERSE | Aliases: F14N23.24, F14N23_24(evalue: 5e-68, score=254) genbank/nr: gi|6856103|gb|AAF29773.1| glutathione S-transferase [Gossypium hirsutum](evalue: 4e-68, score=261)">
      <seq>atgatgtgaaactattaggatcatggcctagtacatttgttatgaggcctcgtatcgcgcttaacgtaaaatcagtgtgttatgatttcttggaggaacagttaagttctaagagtgatcttctccttatatcaaatccagtttacaagaaaattccagttctaattcatgatgggaagtccatttgtgaatcactcaacattgttcagtatattgatgaaaaatggactaattctggtccctctattctccccttggatccttatgatcgtgccattgctcgattttgggcatgttatattgacgataagtggtttccattattccgttcctttgcggttgcccaaggagaggatgccataaaaacagcactagagccagtgttcgacggtctggtgttgttggaagacgccttcaagaattgcagcaaaggaaagaagttctttggcggagacaaaattggatacgtggacattgcacttggatgcttcttaggttggatgagggtgatcgagaagatgaacaacgtcacactacttgatgaagccaagactccaggtttatacaattgggctgaagatttttgtgctgatagttctgtcaaagatgtcatgcctgaaactaataagcttgctgaggctgctaagaaccttatacccaaaatcagagctaatgcatctagctaaatccacacgccacgtttagcctatgaagcctcgatatctattcttaatctctaaagtctagctaagaccatatatggaaataacatttggtattgtgtaaaaaactactaagaaatgagtactatgaagccaagatctactatttataggttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgaggggggccc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="87566" stop="85205"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="87266" g_stop="86956" g_length="311"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="311" r_length="311" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86955" i_stop="86034" i_length="922">
            <donor d_prob="0.974" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86033" g_stop="85510" g_length="524"/>
          <reference_exon_boundary r_type="cDNA" r_start="312" r_stop="835" r_length="524" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="839" polyA_stop="869"/>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U319518" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>835</cumulative_length_of_scored_exons>
        <coverage percentage="0.947" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319518" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="87266" e_stop="86956"/>
          <exon e_start="86033" e_stop="85510"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATGATGTGAAACTATTAGGATCATGGCCTAGTACATTTGTTATGAGGCCTCGTATCGCGCTTAACGTAAAATCAGTGTGTTATGATTTCTTGGAGGAACAGTTAAGTTCTAAGAGTGATCTTCTCCTTATATCAAATCCAGTTTACAAGAAAATTCCAGTTCTAATTCATGATGGGAAGTCCATTTGTGAATCACTCAACATTGTTCAGTATATTGATGAAAAATGGACTAATTCTGGTCCCTCTATTCTCCCCTTGGATCCTTATGATCGTGCCATTGCTCGATTTTGGGCATGTTATATTGACGATAAGGTACACATCTCTCTTTGTAAGTACTGTAAAAGCTTAAGTTATTAGAGAGAACACTTCAAATTCAATTATCTTTGATGTGTATACAGTGGCGTATCCAGAATTTTAAATTAATGGGTGCTTGATAGTTAAAGCATAGTACAGCACGTTGATCGATCCCACCTATAATATTGTTTATATATTTGGTAGTTAGGACAAACCAGCATAATTTACTAGATAGAACTTATGTGCAAGAAGCATCAAAAACTCTTCTTATTAATCATAACTTCAATATTAGTTGTCGAGGAAGCTAGTCATGGCAACAAATAGTGTAAAGCTTCTAGGTTCATGGGCAAGCCCGTTTGTGAACCGCGTTGAACTAGCTCTCAAGATAAAGTCTATTGAGTATGAGTTTATACAACAAAATATGATAAACAAAGGTGAGTTGCTCCTTAAATCCAACCCTGTATACGAGAAAATCCCCGTCCTGATCCATGACGAAAAGCCTATCTGTGAGTCCCTTGTCATCCTTCAGTACATCGATGAAGTTTGGATTAATGATCCCCCGGTTCTTCCGTTTGATCTCTATGATCGTGCCATAGCACGATTTTGGGCAGCCTATATAGATGAAAAGGTGAAGACTATATTTCATATCACTATCTCGTTGTAGGACTAGTATGTCTCGAAAATTCCTCTTACATGTTGTAGTGTCCAATTCTTTGGCGGTGGAAACTCTAATACCATGTTGAGATTGTGTGATCGTGTAATCTAAAATCTTAAGGTATTAGGAATAGAACATTTCTAATTGCTTGTTCACGCTCCAGATGTTCAGTCTTGAACGTGTGCTAGAGAGTGTTAAGAGTCTCACATTTGTTAAGAGAAAAAGTTGTCGTCATGAGCTAGCTGAGGCCTATTTCCTTAACAAACATTTTTATTGATGCTGCAGTGGTTTCCATTATTCCGTTCCTTTGCGGTTGCCCAAGGAGAGGATGCCATAAAAACAGCACTAGAGCCAGTGTTCGACGGTCTGGTGTTGTTGGAAGACGCCTTCAAGAATTGCAGCAAAGGAAAGAAGTTCTTTGGCGGAGACAAAATTGGATACGTGGACATTGCACTTGGATGCTTCTTAGGTTGGATGAGGGTGATCGAGAAGATGAACAACGTCACACTACTTGATGAAGCCAAGACTCCAGGTTTATACAATTGGGCTGAAGATTTTTGTGCTGATAGTTCTGTCAAAGATGTCATGCCTGAAACTAATAAGCTTGCTGAGGCTGCTAAGAACCTTATACCCAAAATCAGAGCTAATGCATCTAGCTAAATCCACACGCCACGTTTAGCCTATGAAGCCTCGATATCTATTCTTAATCTCTAAAGTCTAGCTAAGACCATATATGGAAATAACATTTGGTATTGTGTAAAAAACTACTAAGAAATGAGTACTATGAAGCCAAGATCTACTATTTATAG</genome_strand>
        <mrna_strand>ATGATGTGAAACTATTAGGATCATGGCCTAGTACATTTGTTATGAGGCCTCGTATCGCGCTTAACGTAAAATCAGTGTGTTATGATTTCTTGGAGGAACAGTTAAGTTCTAAGAGTGATCTTCTCCTTATATCAAATCCAGTTTACAAGAAAATTCCAGTTCTAATTCATGATGGGAAGTCCATTTGTGAATCACTCAACATTGTTCAGTATATTGATGAAAAATGGACTAATTCTGGTCCCTCTATTCTCCCCTTGGATCCTTATGATCGTGCCATTGCTCGATTTTGGGCATGTTATATTGACGATAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TGGTTTCCATTATTCCGTTCCTTTGCGGTTGCCCAAGGAGAGGATGCCATAAAAACAGCACTAGAGCCAGTGTTCGACGGTCTGGTGTTGTTGGAAGACGCCTTCAAGAATTGCAGCAAAGGAAAGAAGTTCTTTGGCGGAGACAAAATTGGATACGTGGACATTGCACTTGGATGCTTCTTAGGTTGGATGAGGGTGATCGAGAAGATGAACAACGTCACACTACTTGATGAAGCCAAGACTCCAGGTTTATACAATTGGGCTGAAGATTTTTGTGCTGATAGTTCTGTCAAAGATGTCATGCCTGAAACTAATAAGCTTGCTGAGGCTGCTAAGAACCTTATACCCAAAATCAGAGCTAATGCATCTAGCTAAATCCACACGCCACGTTTAGCCTATGAAGCCTCGATATCTATTCTTAATCTCTAAAGTCTAGCTAAGACCATATATGGAAATAACATTTGGTATTGTGTAAAAAACTACTAAGAAATGAGTACTATGAAGCCAAGATCTACTATTTATAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319517" ref_strand="+" ref_description="SGN-U319517        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | glutathione S-transferase, putative, similar to glutathione S-transferase (sp:Q03666:GTX4_TOBAC); similar to EST gb:H36275 gb:AB039930. | chr1:3395560-3396851 REVERSE | Aliases: F14N23.24, F14N23_24(evalue: 4e-63, score=238) genbank/nr: gi|6856103|gb|AAF29773.1| glutathione S-transferase [Gossypium hirsutum](evalue: 2e-68, score=261)">
      <seq>gtgtaaagcttctaggttcatgggcaagcccgtttgtgaaccgcgttgaactagctctcaagataaagtctattgagtatgagtttatacaacaaaatatgataaacaaaggtgagttgctccttaaatccaaccctgtatacgagaaaatccccgtcctgatccatgacgaaaagcctatctgtgagtcccttgtcatccttcagtacatcgatgaagtttggattaatgatcccccggttcttccgtttgatctctatgatcgtgccatagcacgattttgggcagcctatatagatgaaaagtggtttccattattccgttcctttgcggttgcccaaggagaggatgccataaaaacagcactagagccagtgttcgacggtctggtgttgttggaagacgccttcaagaattgcagcaaaggaaagaagttctttggcggagacaaaattggatacgtggacattgcacttggatgcttcttaggttggatgagggtgatcgagaagatgaacaacgtcacactacttgatgaagccaagactccaggtttatacaattgggctgaagatttttgtgctgatagttctgtcaaagatgtcatgcctgaaactaataagcttgctgaggctgctaagaaccttatacccaaaatcagagctaatgcatctagctaaatccacacgccacgtttagcctatgaagcctcgatatctattcttaatctctaaagtctagctaagaccatatatggaaataacatttggtattgtgtaaaaactactaagaaatgagtactatgaagccaagatctactatt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="86950" stop="85215"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="86650" g_stop="86346" g_length="305"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="305" r_length="305" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="86345" i_stop="86034" i_length="312">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.979" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="86033" g_stop="85515" g_length="519"/>
          <reference_exon_boundary r_type="cDNA" r_start="306" r_stop="823" r_length="518" r_score="0.998"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U319517" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>824</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U319517" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="86650" e_stop="86346"/>
          <exon e_start="86033" e_stop="85515"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGTAAAGCTTCTAGGTTCATGGGCAAGCCCGTTTGTGAACCGCGTTGAACTAGCTCTCAAGATAAAGTCTATTGAGTATGAGTTTATACAACAAAATATGATAAACAAAGGTGAGTTGCTCCTTAAATCCAACCCTGTATACGAGAAAATCCCCGTCCTGATCCATGACGAAAAGCCTATCTGTGAGTCCCTTGTCATCCTTCAGTACATCGATGAAGTTTGGATTAATGATCCCCCGGTTCTTCCGTTTGATCTCTATGATCGTGCCATAGCACGATTTTGGGCAGCCTATATAGATGAAAAGGTGAAGACTATATTTCATATCACTATCTCGTTGTAGGACTAGTATGTCTCGAAAATTCCTCTTACATGTTGTAGTGTCCAATTCTTTGGCGGTGGAAACTCTAATACCATGTTGAGATTGTGTGATCGTGTAATCTAAAATCTTAAGGTATTAGGAATAGAACATTTCTAATTGCTTGTTCACGCTCCAGATGTTCAGTCTTGAACGTGTGCTAGAGAGTGTTAAGAGTCTCACATTTGTTAAGAGAAAAAGTTGTCGTCATGAGCTAGCTGAGGCCTATTTCCTTAACAAACATTTTTATTGATGCTGCAGTGGTTTCCATTATTCCGTTCCTTTGCGGTTGCCCAAGGAGAGGATGCCATAAAAACAGCACTAGAGCCAGTGTTCGACGGTCTGGTGTTGTTGGAAGACGCCTTCAAGAATTGCAGCAAAGGAAAGAAGTTCTTTGGCGGAGACAAAATTGGATACGTGGACATTGCACTTGGATGCTTCTTAGGTTGGATGAGGGTGATCGAGAAGATGAACAACGTCACACTACTTGATGAAGCCAAGACTCCAGGTTTATACAATTGGGCTGAAGATTTTTGTGCTGATAGTTCTGTCAAAGATGTCATGCCTGAAACTAATAAGCTTGCTGAGGCTGCTAAGAACCTTATACCCAAAATCAGAGCTAATGCATCTAGCTAAATCCACACGCCACGTTTAGCCTATGAAGCCTCGATATCTATTCTTAATCTCTAAAGTCTAGCTAAGACCATATATGGAAATAACATTTGGTATTGTGTAAAAAACTACTAAGAAATGAGTACTATGAAGCCAAGATCTACTATT</genome_strand>
        <mrna_strand>GTGTAAAGCTTCTAGGTTCATGGGCAAGCCCGTTTGTGAACCGCGTTGAACTAGCTCTCAAGATAAAGTCTATTGAGTATGAGTTTATACAACAAAATATGATAAACAAAGGTGAGTTGCTCCTTAAATCCAACCCTGTATACGAGAAAATCCCCGTCCTGATCCATGACGAAAAGCCTATCTGTGAGTCCCTTGTCATCCTTCAGTACATCGATGAAGTTTGGATTAATGATCCCCCGGTTCTTCCGTTTGATCTCTATGATCGTGCCATAGCACGATTTTGGGCAGCCTATATAGATGAAAAG........................................................................................................................................................................................................................................................................................................................TGGTTTCCATTATTCCGTTCCTTTGCGGTTGCCCAAGGAGAGGATGCCATAAAAACAGCACTAGAGCCAGTGTTCGACGGTCTGGTGTTGTTGGAAGACGCCTTCAAGAATTGCAGCAAAGGAAAGAAGTTCTTTGGCGGAGACAAAATTGGATACGTGGACATTGCACTTGGATGCTTCTTAGGTTGGATGAGGGTGATCGAGAAGATGAACAACGTCACACTACTTGATGAAGCCAAGACTCCAGGTTTATACAATTGGGCTGAAGATTTTTGTGCTGATAGTTCTGTCAAAGATGTCATGCCTGAAACTAATAAGCTTGCTGAGGCTGCTAAGAACCTTATACCCAAAATCAGAGCTAATGCATCTAGCTAAATCCACACGCCACGTTTAGCCTATGAAGCCTCGATATCTATTCTTAATCTCTAAAGTCTAGCTAAGACCATATATGGAAATAACATTTGGTATTGTGT-AAAAACTACTAAGAAATGAGTACTATGAAGCCAAGATCTACTATT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329075" ref_strand="-" ref_description="SGN-U329075        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains similarity to hedgehog-interacting protein GI:4868122 from (Mus musculus) | chr1:28102471-28105557 FORWARD | Aliases: F25A4.24, F25A4_24(evalue: 2e-21, score=99) genbank/nr: HIPL1(evalue: 2e-19, score=99)">
      <seq>ttttttttttttttttttgaattttacagttagatatatagaatggactgaaatgttgtgttcaaaaatgtatgaaaagtttaaaattaaagaattgcataaagactaaaaagaaagtcaaccaaaaaaaattaaaactaaaaattatattataagcagccatgccaataccattctgttgttgcagagttaagtgctaatgggactgcaccaaatccatcattggttggtttttcactcatttgtgtacttaaacagccaatctttgttggtctggttccttcgagcttataccagctctgataccatgttgaattacgttaccacctccatttcaaaaggtttcattgcaagcaccatatgttgcagaccttggacattggggtaactattcggttcctcgagataatccttattcacaaaataaggatttgcagcctgaaatctgggcgtttggactgagagacccttggcgctgtagctttgattcagaaaggccttcgaaattcatctgtgcagatgttggccaggttcattgacaatctcatttttgttgagacctattatatctctgttggttaagatcttgtcaacagacataacatgctacctggtatcttgacgtgagtttctgaaaatcatttgaatcatgcaggatcagtatgaaaaagttgacatcatcacaaaagggagaaactatggatggagcatgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="+" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="81844" stop="91610"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90267" g_stop="90278" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="0.667"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90279" i_stop="90607" i_length="329">
            <donor d_prob="0.900" d_score="0.00"/>
            <acceptor a_prob="0.000" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90608" g_stop="91310" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="715" r_length="703" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="+" ref_id="SGN-U329075" ref_strand="-">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>715</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U329075" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="90267" e_stop="90278"/>
          <exon e_start="90608" e_stop="91310"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTATGTTTTTGGTATGCTTCATGGCCAAGAATTGAACACGTTAAAGTTGAAATTTGTGCTGTTTTTTATCTAGAAGAAGTGGGAACTTTTACGATTTTTTGATTTTCGATTTGATATTCGTATGAACGTCTGATTAAAGTTGAATTTGTGCATTACAAATTCATTTTTTGGCAATATTTTCGATTAGATTGTTTTCATGCTAACGCTAGAATAAAAGACGTTTGATTAAGAACACAAGGATTTCAACCATCACAGCACAATTTATGTTGGTTAAAAAAGTGAGACCTGATTATTGTTTGATTTATTGACTTGATATGAAATTTTAAAAAGTAAAAGAAAGATTTTTGAATTTTACAGTTAGATATATAGAATGGACTGAAATGTTGTGTTCAAAAATGTATGAAAAGTTTAAAATTAAAGAATTGCATAAAGACTAAAAAGAAAGTCAACCAAAAAAAATTAAAACTAAAAATTATATTATAAGCAGCCATGCCAATACCATTCTGTTGTTGCAGAGTTAAGTGCTAATGGGACTGCACCAAATCCATCATTGGTTGGTTTTTCACTCATTTGTGTACTTAAACAGCCAATCTTTGTTGGTCTGGTTCCTTCGAGCTTATACCAGCTCTGATACCATGTTGAATTACGTTACCACCTCCATTTCAAAAGGTTTCATTGCAAGCACCATATGTTGCAGACCTTGGACATTGGGGTAACTATTCGGTTCCTCGAGATAATCCTTATTCACAAAATAAGGATTTGCAGCCTGAAATCTGGGCGTTTGGACTGAGAGACCCTTGGCGCTGTAGCTTTGATTCAGAAAGGCCTTCGAAATTCATCTGTGCAGATGTTGGCCAGGTTCATTGACAATCTCATTTTTGTTGAGACCTATTATATCTCTGTTGGTTAAGATCTTGTCAACAGACATAACATGCTACCTGGTATCTTGACGTGAGTTTCTGAAAATCATTTGAATCATGCAGGATCAGTATGAAGAAGTTGACATCATCACAAAAGGAGGAAACTATGGATGGAGCATGTAT</genome_strand>
        <mrna_strand>TTTTTTTTTTTT.........................................................................................................................................................................................................................................................................................................................................TTTTTTGAATTTTACAGTTAGATATATAGAATGGACTGAAATGTTGTGTTCAAAAATGTATGAAAAGTTTAAAATTAAAGAATTGCATAAAGACTAAAAAGAAAGTCAACCAAAAAAAATTAAAACTAAAAATTATATTATAAGCAGCCATGCCAATACCATTCTGTTGTTGCAGAGTTAAGTGCTAATGGGACTGCACCAAATCCATCATTGGTTGGTTTTTCACTCATTTGTGTACTTAAACAGCCAATCTTTGTTGGTCTGGTTCCTTCGAGCTTATACCAGCTCTGATACCATGTTGAATTACGTTACCACCTCCATTTCAAAAGGTTTCATTGCAAGCACCATATGTTGCAGACCTTGGACATTGGGGTAACTATTCGGTTCCTCGAGATAATCCTTATTCACAAAATAAGGATTTGCAGCCTGAAATCTGGGCGTTTGGACTGAGAGACCCTTGGCGCTGTAGCTTTGATTCAGAAAGGCCTTCGAAATTCATCTGTGCAGATGTTGGCCAGGTTCATTGACAATCTCATTTTTGTTGAGACCTATTATATCTCTGTTGGTTAAGATCTTGTCAACAGACATAACATGCTACCTGGTATCTTGACGTGAGTTTCTGAAAATCATTTGAATCATGCAGGATCAGTATGAAAAAGTTGACATCATCACAAAAGGGAGAAACTATGGATGGAGCATGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U332681" ref_strand="+" ref_description="SGN-U332681        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains similarity to hedgehog-interacting protein GI:4868122 from (Mus musculus) | chr1:28102471-28105557 FORWARD | Aliases: F25A4.24, F25A4_24(evalue: 5e-34, score=111) genbank/nr: unnamed(evalue: 1e-35, score=120)">
      <seq>tcagtttcaggagaagataaattgttgatcgtgcaatcaatttaactttaaatttaagtcaaaagcagtagtaatcaagtatctattctgatcaagtttgtttttcaatcacctatcaactgaagctaagttaattctttggtggggaaattgatgttgctttgagtgcaatggctacaggatgaagctagtcaaaagcagcagacagtaaagaacaaggaccgagcagagatctgctttagcaacgtgaccatctgaaggtgcagagggacctgggctctcagcagtccttgctatctccatcgggcaagtgtagttgcagcgacttggaccaaccactctgtatacaccggtgcttgttaaaacaaaggtatccttcctgttatcctgtcccaacgagaatatgccacctaaagcaggcaatggactattgggaactgagctgcaattgagaggggaatcatgagcacaactgaaagaaatgcctcttgctgtaaagttcccactgttatacggattttcttgagctgcccaaaagttcttagcatacaaatctccatagagggatcagtcttggagcgataaacatagccacctgatatggctgcacatccaacttctttatttatatcagaatggcggtatcctaacactgggaatatgggatcctcgaaatcaccagctgaagcatttttcaagcgtga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="92670" stop="91020"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="92370" g_stop="92205" g_length="166"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="92204" i_stop="91956" i_length="249">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="91955" g_stop="91558" g_length="398"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="564" r_length="398" r_score="0.992"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="91557" i_stop="91460" i_length="98">
            <donor d_prob="0.994" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="91459" g_stop="91320" g_length="140"/>
          <reference_exon_boundary r_type="cDNA" r_start="565" r_stop="704" r_length="140" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U332681" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>704</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U332681" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="92370" e_stop="92205"/>
          <exon e_start="91955" e_stop="91558"/>
          <exon e_start="91459" e_stop="91320"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAGTTTCAGGAGAAGATAAATTGTTGATCGTGCAATCAATTTAACTTTAAATTTAAGTCAAAAGCAGTAGTAATCAAGTATCTATTCTGATCAAGTTTGTTTTTCAATCACCTATCAACTGAAGCTAAGTTAATTCTTTGGTGGGGAAATTGATGTTGCTTTGAGGTAGCTTTGCTGTTTTATTCTTTTATTAATGTTTTTTCTAATTAAAACGTAGTATAAATATATGATATGATATGTTTCTGTGGTTAAAGTCTCGCGTTATTTAAAATAGCAAGGGAAATAGTTTAGCTTTCAGGGTTGATCACGGTTTTCATCTTAAGAGTTGCATTCTATCTTCTGCGACATGATAATGTTGCTCCACCACAAACTATATCTTGTCTATTTAGTATAATACTAATCTCATAATCACAGTGCAATGGCTACAGGATGAAGCTAGTCAAAAGCAGCAGACAGTAAAGAACAAGGACCGAGCAGAGATCTGCTTTAGCAACGTGACCATCTGAAGGTGCAGAGGGACCTGGGCTCTCAGCAGTCCTTGCTATCTCCATCGGGCAAGTGTAGTTGCAGCGACTTGGACGAACCACTCTGTATACACCGGTGCTTGTTAAAACAAAGGTATCCTTCCTGTTATCCTGTCCAAACGAGAATATGCAACCTAAAGCAGGCAATGGACTATTGGGAACTGAGCTGCAATTGAGAGGGGAATCATGAGCACAACTGAAAGAAATGCCTCTTGCTGTAAAGTTCCCACTGTTATACGGATTTTCTTGAGCTGCCCAAAAGTTCTTAGCATACAAATCTCCATAGAGGTAACTGCAAATGCAACCATCCTTCTATTAAGTTGTGTTCACTAATGTACAATTTTTATATCGACAAGGGTGTTCATATTTACCTTCCATATATGCAGGGATCAGTCTTGGAGCGATAAACATAGCCACCTGATATGGCTGCACATCCAACTTCTTTATTTATATCAGAATGGCGGTATCCTAACACTGGGAATATGGGATCCTCGAAATCACCAGCTGAAGCATTTTTCAAGCGTGA</genome_strand>
        <mrna_strand>TCAGTTTCAGGAGAAGATAAATTGTTGATCGTGCAATCAATTTAACTTTAAATTTAAGTCAAAAGCAGTAGTAATCAAGTATCTATTCTGATCAAGTTTGTTTTTCAATCACCTATCAACTGAAGCTAAGTTAATTCTTTGGTGGGGAAATTGATGTTGCTTTGAG.........................................................................................................................................................................................................................................................TGCAATGGCTACAGGATGAAGCTAGTCAAAAGCAGCAGACAGTAAAGAACAAGGACCGAGCAGAGATCTGCTTTAGCAACGTGACCATCTGAAGGTGCAGAGGGACCTGGGCTCTCAGCAGTCCTTGCTATCTCCATCGGGCAAGTGTAGTTGCAGCGACTTGGACCAACCACTCTGTATACACCGGTGCTTGTTAAAACAAAGGTATCCTTCCTGTTATCCTGTCCCAACGAGAATATGCCACCTAAAGCAGGCAATGGACTATTGGGAACTGAGCTGCAATTGAGAGGGGAATCATGAGCACAACTGAAAGAAATGCCTCTTGCTGTAAAGTTCCCACTGTTATACGGATTTTCTTGAGCTGCCCAAAAGTTCTTAGCATACAAATCTCCATAGAG..................................................................................................GGATCAGTCTTGGAGCGATAAACATAGCCACCTGATATGGCTGCACATCCAACTTCTTTATTTATATCAGAATGGCGGTATCCTAACACTGGGAATATGGGATCCTCGAAATCACCAGCTGAAGCATTTTTCAAGCGTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U343795" ref_strand="+" ref_description="SGN-U343795        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G05670.1 | Symbol: None | UDP-glucoronosyl/UDP-glucosyl transferase family protein, similar to UDP-glucose:salicylic acid glucosyltransferase (Nicotiana tabacum) GI:7385017; contains Pfam profiles PF00201: UDP-glucoronosyl and UDP-glucosyl transferase, PF01535: PPR repeat | chr1:1698573-1702719 REVERSE | Aliases: F3F20.12, F3F20_12 (evalue: 3e-20, score=95.9) genbank/nr: gi|15221232|ref|NP_172058.1| indole-3-acetate beta-glucosyltransferase -related [Arabidopsis thaliana] gi|25406853|pir||H86190 hypothetical protein [imported] - Arabidopsis thaliana gi|4836917|gb|AAD30619.1| similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis thaliana](evalue: 2e-18, score=95.9)">
      <seq>aagaggcttggtttttgcacaaggaaatgatcaaaaagggattcactccgacattagagacttatcatgcactcatcaaagggtttttaaagaggaaaaagtattctgaggcgaaagaattgtttgaagagatgagaagatatggtttattggcagataaagaattttactctatctttgcggatatgaactatgaacaagggaactttgatttggcgcttgagctttgtgatgaagcagtagaaaaatgtcttacagacaagactgataacaggaatgcatgatggttgtctgacatgattctgcatcctgtagctatttttggaaccagtgacaaaaaactagttgtcttgctcccaatgatgctaatctttttcgtgctgaagtcagttcaagttgtgttactctggaggtgaagggaggaccaatgaatcacctttaaaacaatcccgcttggatcagaaagaagcatgcaagctaggtgtcgtggacttggagttctact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="93901" stop="92312"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="93601" g_stop="93194" g_length="408"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="408" r_length="408" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="93193" i_stop="93009" i_length="185">
            <donor d_prob="0.805" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="93008" g_stop="92936" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="481" r_length="73" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="92935" i_stop="92636" i_length="300">
            <donor d_prob="0.971" d_score="1.00"/>
            <acceptor a_prob="0.671" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="92635" g_stop="92612" g_length="24"/>
          <reference_exon_boundary r_type="cDNA" r_start="482" r_stop="505" r_length="24" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U343795" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>505</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U343795" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="93601" e_stop="93194"/>
          <exon e_start="93008" e_stop="92936"/>
          <exon e_start="92635" e_stop="92612"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAGAGGCTTGGTTTTTGCACAAGGAAATGATCAAAAAGGGATTCACTCCGACATTAGAGACTTATCATGCACTCATCAAAGGGTTTTTAAAGAGGAAAAAGTATTCTGAGGCGAAAGAATTGTTTGAAGAGATGAGAAGATATGGTTTATTGGCAGATAAAGAATTTTACTCTATCTTTGCGGATATGAACTATGAACAAGGGAACTTTGATTTGGCGCTTGAGCTTTGTGATGAAGCAGTAGAAAAATGTCTTACAGACAAGACTGATAACAGGAATGCATGATGGTTGTCTGACATGATTCTGCATCCTGTAGCTATTTTTGGAACCAGTGACAAAAAACTAGTTGTCTTGCTCCCAATGATGCTAATCTTTTTCGTGCTGAAGTCAGTTCAAGTTGTGTTACTCTGTAAGTCGTCAGATGATATTTTGAGACATGCGAGTTTACTATACTTGGTATTTGTGTATTTAATTTTTAATTCACTTCCATTTCTTCAAAGAACTAAAGCTGAGTACACTTTTAGATGCATGCTGCAATCTAGCATTTGGGTGCACTTTTTCTTTCTTTGCTTAGATTTGCACCATTCGATGCAGGGAGGTGAAGGGAGGACCAATGAATCACCTTTAAAACAATCCCGCTTGGATCAGAAAGAAGCATGCAAGCTAGGTAAAAATTGCAAATTCATGTTTCCTCCTTTATAGTAAAGTGGAAAACGGAACACGTTAGACTATACTCTCTCTTTTTCCCATACAAACCTTTATATGAACTTCTTTGGTAAGGGTGCAAAACTTTAAATGGACTTGTACATGGCTATGCTATACTTTTATTCTGGTGGGGTGGAGAGTTGATGTTAAGGATGTAAAGACAGAAACTCCAAGGCACCTCATTATTTTAACCTATATTTGATGTTCCTAGCTGCAGAAGTGCTTGTGGTTGATCTAACGTTCATCTTTCTTCGTGAATCAGGTGTCGTGGACTTGGAGTTCTACT</genome_strand>
        <mrna_strand>AAGAGGCTTGGTTTTTGCACAAGGAAATGATCAAAAAGGGATTCACTCCGACATTAGAGACTTATCATGCACTCATCAAAGGGTTTTTAAAGAGGAAAAAGTATTCTGAGGCGAAAGAATTGTTTGAAGAGATGAGAAGATATGGTTTATTGGCAGATAAAGAATTTTACTCTATCTTTGCGGATATGAACTATGAACAAGGGAACTTTGATTTGGCGCTTGAGCTTTGTGATGAAGCAGTAGAAAAATGTCTTACAGACAAGACTGATAACAGGAATGCATGATGGTTGTCTGACATGATTCTGCATCCTGTAGCTATTTTTGGAACCAGTGACAAAAAACTAGTTGTCTTGCTCCCAATGATGCTAATCTTTTTCGTGCTGAAGTCAGTTCAAGTTGTGTTACTCT.........................................................................................................................................................................................GGAGGTGAAGGGAGGACCAATGAATCACCTTTAAAACAATCCCGCTTGGATCAGAAAGAAGCATGCAAGCTAG............................................................................................................................................................................................................................................................................................................GTGTCGTGGACTTGGAGTTCTACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329214" ref_strand="+" ref_description="SGN-U329214        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | galactosyltransferase family protein, contains Pfam profile:PF01762 galactosyltransferase | chr1:9421164-9424054 FORWARD | Aliases: T7N9.18, T7N9_18(evalue: 2e-32, score=135) genbank/nr: gi|50934905|ref|XP_476980.1| putative beta-1,3-galactosyltransferase 5 [Oryza sativa (japonica cultivar-group)] >gi|34393276|dbj|BAC83186.1| putative beta-1,3-galactosyltransferase 5 [Oryza sativa (japonica cultivar-group)] (evalue: 1e-31, score=138)">
      <seq>cataagctaaggttgtttaagatggaggacgtgagcatgggaatgtgggtagaacaattcaacagttccaggcccgtagagtatgtgcatagcttgaagttctgtcagtttgggtgcattgatgattattacactgcacattatcaatctccaaggcaaatgatctgcctgtggagaaagttgctgaaccaagggaaacctcagtgctgtaatgtgagatgacaaggcataccctgtcagctagtgttaggcaactctgaaaaggaaacgagacaagatagatgccaaggcgcgcataccctgttagctagtgttaggcaacacggaaaaggaagcgagacaagataagttcctgggaagagcttgtacatattgctcgagtaaattagcctatcgtgctataattatatttacttcattcattcttttgttggggcgtcagtcttgtaccccaggctagttgacacgtcagtctcgttaaactgtatgaaaacaatgacagcttaagctcttatatatgaaattcaagggtgaatggctcattttcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLm0037H06-NzzDO/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05SLm0037H06.1" temp_strand="-" temp_description="C05SLm0037H06.1  AC188782.2 htgs_phase:3 submitted_to_sgn_as:C05SLm0037H06, sequenced_by:iitg upload_account_name:india COMPLETE SEQUENCE">
        <position start="105758" stop="81849"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="105601" g_stop="105590" g_length="12"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="12" r_length="12" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="105589" i_stop="105458" i_length="132">
            <donor d_prob="0.992" d_score="0.00"/>
            <acceptor a_prob="0.907" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="105457" g_stop="104909" g_length="549"/>
          <reference_exon_boundary r_type="cDNA" r_start="13" r_stop="561" r_length="549" r_score="0.982"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLm0037H06.1" gen_strand="-" ref_id="SGN-U329214" ref_strand="+">
        <total_alignment_score>0.982</total_alignment_score>
        <cumulative_length_of_scored_exons>561</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLm0037H06.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U329214" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="105601" e_stop="105590"/>
          <exon e_start="105457" e_stop="104909"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATAAGCTAAGGGTAAGTGCCTTGATCTGCTTTGTGAAATAATCCTAACCTCTCTCTTGTCCCCCCCCCCCCCCCCCCCCCGGTCCCTTGTGGAAACCTGGACAGAGAAATAATCATATCTAACATATATTTGACCTGCTGCAGTTGTTTAAGATGGAGGACGTGAGCATGGGAATGTGGGTAGAACAATTCAACAGTTCCAGGCCCGTAGAGTATGTGCATAGCTTGAAGTTCTGTCAGTTTGGGTGCATTGATGATTATTACACTGCACATTATCAATCTCCAAGGCAAATGATCTGCCTGTGGAGAAAGTTGCTGAACCAAGGGAAACCTCAGTGCTGTAATGTGAGATGACAAGGCATACCCTGTCAGCTAGTGTTAGGCAACTCTGAAAAGGAAACGAGACAAGATAGATGCCAAGGCGCGCATACCCTGTTAGCTAGTGTTAGGCAACACGGAAAAGGAAGCGAGACAAGATAAGTTCCTGGGAAGAGCTTGTACATATTGCTCGAGTAAATTAGCCTATCGTGCTATAATTATATTTACTTCATTCATTCTTTTGTTGGGGCGTCAGTCTTGTACCCCAGGCTAGTTGACACGTCAGTCTCGTTAAACTGTATGAAAACAATGACAGCTTAAGCTCTTATATATGAAATTCAAGGGTGAATGGCTCATTTTCAATCTCATTTTGCA</genome_strand>
        <mrna_strand>CATAAGCTAAGG....................................................................................................................................TTGTTTAAGATGGAGGACGTGAGCATGGGAATGTGGGTAGAACAATTCAACAGTTCCAGGCCCGTAGAGTATGTGCATAGCTTGAAGTTCTGTCAGTTTGGGTGCATTGATGATTATTACACTGCACATTATCAATCTCCAAGGCAAATGATCTGCCTGTGGAGAAAGTTGCTGAACCAAGGGAAACCTCAGTGCTGTAATGTGAGATGACAAGGCATACCCTGTCAGCTAGTGTTAGGCAACTCTGAAAAGGAAACGAGACAAGATAGATGCCAAGGCGCGCATACCCTGTTAGCTAGTGTTAGGCAACACGGAAAAGGAAGCGAGACAAGATAAGTTCCTGGGAAGAGCTTGTACATATTGCTCGAGTAAATTAGCCTATCGTGCTATAATTATATTTACTTCATTCATTCTTTTGTTGGGGCGTCAGTCTTGTACCCCAGGCTAGTTGACACGTCAGTCTCGTTAAACTGTATGAAAACAATGACAGCTTAAGCTCTTATATATGAAATTCAAGGGTGAATGGCTCATTTTCAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>17</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="12398" PGL_stop="13170"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12398" e_stop="12495"/>
            <exon e_start="12651" e_stop="12773"/>
            <exon e_start="12875" e_stop="13170"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.694" acc_prob="0.215" e_score="1.000"/>
          <exon-intron don_prob="0.902" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="12398" e_stop="12495" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.694" acc_prob="0.215">
            <gDNA_intron_boundary i_start="12496" i_stop="12650" i_length="155"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="12651" e_stop="12773" e_length="123"/>
          </exon>
          <intron i_serial="2" don_prob="0.902" acc_prob="0.999">
            <gDNA_intron_boundary i_start="12774" i_stop="12874" i_length="101"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="12875" e_stop="13170" e_length="296"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12398" stop="12495"/>
              <exon start="12651" stop="12773"/>
              <exon start="12875" stop="13170"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345211" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CAATCACACCACAAAGCAAGAGGTCTCAAGTCATTGCTTTTCACTCTTCAACAAAATGGAAGCTCCATTTTGATTCTTTGAAAAATACAAACAAACTG : ATTGTTATTGACTTCACAGCTACATGGTGTGGTCCTTGCAAATACATGGAACCAGTTCTCAATGACTTTGCTGCTAAATATACAGACGTTGAGTTTGTCAAGATTGATGTCGATGAGCTGGAT : GATGTAGCTCAAGAATATGGGGTTCAAGCAATGCCAACGTTCGTGCTGATAAAGAAAGGTAAGGTAGTTGACAAGATTGTTGGAGCAGACAAGGATGGGCTACAGAAGAAGATTCAGAAACACAAAGCTATCTACGTCTAAACAAACCAAAGGCAGTAACGTAATGAGCAGGGTTTACTCGACGATAGGTCTCTGTGCAGAATAAATGTTATATCTTTGTCAGTAAGAACTAGTTATGTACTCACCTATGGTCTTTCTCACTTCTGATAGTAAAATCCAAACAGGCTGATTTAAGC</gDNA_template>
            <first_frame> Q  S  H  H  K  A  R  G  L  K  S  L  L  F  T  L  Q  Q  N  G  S  S  I  L  I  L  *  K  I  Q  T  N  * :   L  L  L  T  S  Q  L  H  G  V  V  L  A  N  T  W  N  Q  F  S  M  T  L  L  L  N  I  Q  T  L  S  L  S  R  L  M  S  M  S  W  M :   M  *  L  K  N  M  G  F  K  Q  C  Q  R  S  C  *  *  R  K  V  R  *  L  T  R  L  L  E  Q  T  R  M  G  Y  R  R  R  F  R  N  T  K  L  S  T  S  K  Q  T  K  G  S  N  V  M  S  R  V  Y  S  T  I  G  L  C  A  E  *  M  L  Y  L  C  Q  *  E  L  V  M  Y  S  P  M  V  F  L  T  S  D  S  K  I  Q  T  G  *  F  K  </first_frame>
            <second_frame>  N  H  T  T  K  Q  E  V  S  S  H  C  F  S  L  F  N  K  M  E  A  P  F  *  F  F  E  K  Y  K  Q  T   : D  C  Y  *  L  H  S  Y  M  V  W  S  L  Q  I  H  G  T  S  S  Q  *  L  C  C  *  I  Y  R  R  *  V  C  Q  D  *  C  R  *  A  G   : *  C  S  S  R  I  W  G  S  S  N  A  N  V  R  A  D  K  E  R  *  G  S  *  Q  D  C  W  S  R  Q  G  W  A  T  E  E  D  S  E  T  Q  S  Y  L  R  L  N  K  P  K  A  V  T  *  *  A  G  F  T  R  R  *  V  S  V  Q  N  K  C  Y  I  F  V  S  K  N  *  L  C  T  H  L  W  S  F  S  L  L  I  V  K  S  K  Q  A  D  L  S </second_frame>
            <third_frame>   I  T  P  Q  S  K  R  S  Q  V  I  A  F  H  S  S  T  K  W  K  L  H  F  D  S  L  K  N  T  N  K  L  :  I  V  I  D  F  T  A  T  W  C  G  P  C  K  Y  M  E  P  V  L  N  D  F  A  A  K  Y  T  D  V  E  F  V  K  I  D  V  D  E  L  D  :  D  V  A  Q  E  Y  G  V  Q  A  M  P  T  F  V  L  I  K  K  G  K  V  V  D  K  I  V  G  A  D  K  D  G  L  Q  K  K  I  Q  K  H  K  A  I  Y  V  *  T  N  Q  R  Q  *  R  N  E  Q  G  L  L  D  D  R  S  L  C  R  I  N  V  I  S  L  S  V  R  T  S  Y  V  L  T  Y  G  L  S  H  F  *  *  *  N  P  N  R  L  I  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12400" stop="12495"/>
                    <exon start="12651" stop="12773"/>
                    <exon start="12875" stop="13015"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>357</number_coding_nucleotides>
                  <number_encoded_amino_acids>119</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITPQSKRSQVIAFHSSTKWKLHFDSLKNTNKLIVIDFTATWCGPCKYMEPVLNDFAAKYTDVEFVKIDVDELDDVAQEYGVQAMPTFVLIKKGKVVDKIVGADKDGLQKKIQKHKAIYV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="14288" PGL_stop="13594"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14288" e_stop="13594"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14288" e_stop="13594" e_length="695"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14288" stop="13594"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327667" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGGTTGGAAGAAAGGCACAAAAATAACTTTTCCAGAGAAAGGGGACTATGAATATGGAGCTGCCCCGGGTGATCTTATTTTTGTGATTGATGAAAAGCCACATGCTGTCTTCAAGAGGGATGGAAATGATCTAGTCACGAATCAGAAAATATCGTTACTGGATGCTCTCACTGGAAAAACTATCAGCTTGACTACTTTGGACGGAAGGGAACTCACAATACCAATCAAAGAAATCGTCAAACCAGGACAGGAGCTGATAATCCAAAATGAGGGAATGCCAATATCAAAGGAACGTGGCAAAAAAGGGAATTTGAAGATCAAGTTTGACATTAAATTTCCATCAAGGCTAAATGCAGATCAGAAATCTGATCTCAGAAGGGTGCTATGCAGGAGTATTGACTAGTCCTATTTTTAACTTAAGGTGTCACTAACACTATCTTGGAGTTGCGCGGAATGTAAATATTTAACAAGCTTTCTGTAGAAATGAAATTGTACATATTAGGATATAATCTTAAGGATGCGTTCCAACATTTACAAATAGTAAGCACCAAAAGAGGAGCTAATGTAGCTACTTCTTTAGCTGCTTGCATTTTCTTTTGTTGGATGTAAAAGGAGTAAGTAGTTTAATAGCTGTGTTGTTTGATTTGGAGGTGGATACTATATATTAAGTATTGTAGTTGCGAGTAGTGGCTCT</gDNA_template>
            <first_frame> Q  V  G  R  K  A  Q  K  *  L  F  Q  R  K  G  T  M  N  M  E  L  P  R  V  I  L  F  L  *  L  M  K  S  H  M  L  S  S  R  G  M  E  M  I  *  S  R  I  R  K  Y  R  Y  W  M  L  S  L  E  K  L  S  A  *  L  L  W  T  E  G  N  S  Q  Y  Q  S  K  K  S  S  N  Q  D  R  S  *  *  S  K  M  R  E  C  Q  Y  Q  R  N  V  A  K  K  G  I  *  R  S  S  L  T  L  N  F  H  Q  G  *  M  Q  I  R  N  L  I  S  E  G  C  Y  A  G  V  L  T  S  P  I  F  N  L  R  C  H  *  H  Y  L  G  V  A  R  N  V  N  I  *  Q  A  F  C  R  N  E  I  V  H  I  R  I  *  S  *  G  C  V  P  T  F  T  N  S  K  H  Q  K  R  S  *  C  S  Y  F  F  S  C  L  H  F  L  L  L  D  V  K  G  V  S  S  L  I  A  V  L  F  D  L  E  V  D  T  I  Y  *  V  L  *  L  R  V  V  A   </first_frame>
            <second_frame>  R  L  E  E  R  H  K  N  N  F  S  R  E  R  G  L  *  I  W  S  C  P  G  *  S  Y  F  C  D  *  *  K  A  T  C  C  L  Q  E  G  W  K  *  S  S  H  E  S  E  N  I  V  T  G  C  S  H  W  K  N  Y  Q  L  D  Y  F  G  R  K  G  T  H  N  T  N  Q  R  N  R  Q  T  R  T  G  A  D  N  P  K  *  G  N  A  N  I  K  G  T  W  Q  K  R  E  F  E  D  Q  V  *  H  *  I  S  I  K  A  K  C  R  S  E  I  *  S  Q  K  G  A  M  Q  E  Y  *  L  V  L  F  L  T  *  G  V  T  N  T  I  L  E  L  R  G  M  *  I  F  N  K  L  S  V  E  M  K  L  Y  I  L  G  Y  N  L  K  D  A  F  Q  H  L  Q  I  V  S  T  K  R  G  A  N  V  A  T  S  L  A  A  C  I  F  F  C  W  M  *  K  E  *  V  V  *  *  L  C  C  L  I  W  R  W  I  L  Y  I  K  Y  C  S  C  E  *  W  L  </second_frame>
            <third_frame>   G  W  K  K  G  T  K  I  T  F  P  E  K  G  D  Y  E  Y  G  A  A  P  G  D  L  I  F  V  I  D  E  K  P  H  A  V  F  K  R  D  G  N  D  L  V  T  N  Q  K  I  S  L  L  D  A  L  T  G  K  T  I  S  L  T  T  L  D  G  R  E  L  T  I  P  I  K  E  I  V  K  P  G  Q  E  L  I  I  Q  N  E  G  M  P  I  S  K  E  R  G  K  K  G  N  L  K  I  K  F  D  I  K  F  P  S  R  L  N  A  D  Q  K  S  D  L  R  R  V  L  C  R  S  I  D  *  S  Y  F  *  L  K  V  S  L  T  L  S  W  S  C  A  E  C  K  Y  L  T  S  F  L  *  K  *  N  C  T  Y  *  D  I  I  L  R  M  R  S  N  I  Y  K  *  *  A  P  K  E  E  L  M  *  L  L  L  *  L  L  A  F  S  F  V  G  C  K  R  S  K  *  F  N  S  C  V  V  *  F  G  G  G  Y  Y  I  L  S  I  V  V  A  S  S  G  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14286" stop="13885"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>399</number_coding_nucleotides>
                  <number_encoded_amino_acids>133</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GWKKGTKITFPEKGDYEYGAAPGDLIFVIDEKPHAVFKRDGNDLVTNQKISLLDALTGKTISLTTLDGRELTIPIKEIVKPGQELIIQNEGMPISKERGKKGNLKIKFDIKFPSRLNADQKSDLRRVLCRSID*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="16780" PGL_stop="16270"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="16780" e_stop="16270"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="16780" e_stop="16270" e_length="511"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="16780" stop="16270"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341313" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGGTGATTATTCCAACGGTTAGCTACAATGGGAGTTGATTACTATAACTTACTGAAAGTATCTAGGAATGCGAGTGAAGAAGATTTGAAGAGATCGTACAAGCGATTAGCGATGAAATGGCATCCAGATAAGAATAGTCAGAACAATAAGGAAGCAGAAGCGAAATTCAAGCAGATTTCTGAGGCGTATGATGTGCTTAGTGATCCTCAGAAGCGTCAGATCTATGATTTGTACGGTGACGATGCGTTGAAGTCTGGTCAATTTGCTTCGGCATCGCCGACTAGTGCTGGTAGTGGGACTGGTAATGGTAGAGGGTTTAGATTCAATACGCGTGATGCGGAGGATATTTTTGCTGAGTTTTTTGGTGGATCGGAGGGGCTTAGTAGTGGTTCTGGTGCCGGAGTTGGTAGGAAAGCAGCGCCGGTGGAGAATAAACTTCCGTGTAGCTTGGAAGAGCTTTACAAAGGATCTAGAAGGAAAATGAAGATCTCAAGGATTCTTCTGGATGAC</gDNA_template>
            <first_frame> V  V  I  I  P  T  V  S  Y  N  G  S  *  L  L  *  L  T  E  S  I  *  E  C  E  *  R  R  F  E  E  I  V  Q  A  I  S  D  E  M  A  S  R  *  E  *  S  E  Q  *  G  S  R  S  E  I  Q  A  D  F  *  G  V  *  C  A  *  *  S  S  E  A  S  D  L  *  F  V  R  *  R  C  V  E  V  W  S  I  C  F  G  I  A  D  *  C  W  *  W  D  W  *  W  *  R  V  *  I  Q  Y  A  *  C  G  G  Y  F  C  *  V  F  W  W  I  G  G  A  *  *  W  F  W  C  R  S  W  *  E  S  S  A  G  G  E  *  T  S  V  *  L  G  R  A  L  Q  R  I  *  K  E  N  E  D  L  K  D  S  S  G  *  </first_frame>
            <second_frame>  W  *  L  F  Q  R  L  A  T  M  G  V  D  Y  Y  N  L  L  K  V  S  R  N  A  S  E  E  D  L  K  R  S  Y  K  R  L  A  M  K  W  H  P  D  K  N  S  Q  N  N  K  E  A  E  A  K  F  K  Q  I  S  E  A  Y  D  V  L  S  D  P  Q  K  R  Q  I  Y  D  L  Y  G  D  D  A  L  K  S  G  Q  F  A  S  A  S  P  T  S  A  G  S  G  T  G  N  G  R  G  F  R  F  N  T  R  D  A  E  D  I  F  A  E  F  F  G  G  S  E  G  L  S  S  G  S  G  A  G  V  G  R  K  A  A  P  V  E  N  K  L  P  C  S  L  E  E  L  Y  K  G  S  R  R  K  M  K  I  S  R  I  L  L  D  D </second_frame>
            <third_frame>   G  D  Y  S  N  G  *  L  Q  W  E  L  I  T  I  T  Y  *  K  Y  L  G  M  R  V  K  K  I  *  R  D  R  T  S  D  *  R  *  N  G  I  Q  I  R  I  V  R  T  I  R  K  Q  K  R  N  S  S  R  F  L  R  R  M  M  C  L  V  I  L  R  S  V  R  S  M  I  C  T  V  T  M  R  *  S  L  V  N  L  L  R  H  R  R  L  V  L  V  V  G  L  V  M  V  E  G  L  D  S  I  R  V  M  R  R  I  F  L  L  S  F  L  V  D  R  R  G  L  V  V  V  L  V  P  E  L  V  G  K  Q  R  R  W  R  I  N  F  R  V  A  W  K  S  F  T  K  D  L  E  G  K  *  R  S  Q  G  F  F  W  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="16773" stop="16270"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>504</number_coding_nucleotides>
                  <number_encoded_amino_acids>168</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFQRLATMGVDYYNLLKVSRNASEEDLKRSYKRLAMKWHPDKNSQNNKEAEAKFKQISEAYDVLSDPQKRQIYDLYGDDALKSGQFASASPTSAGSGTGNGRGFRFNTRDAEDIFAEFFGGSEGLSSGSGAGVGRKAAPVENKLPCSLEELYKGSRRKMKISRILLDD</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="24326" PGL_stop="24859"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24326" e_stop="24419"/>
            <exon e_start="24613" e_stop="24859"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.980" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="24326" e_stop="24419" e_length="94"/>
          </exon>
          <intron i_serial="1" don_prob="0.980" acc_prob="0.999">
            <gDNA_intron_boundary i_start="24420" i_stop="24612" i_length="193"/>
          </intron>
          <exon e_serial="2" e_score="0.996">
            <gDNA_exon_boundary e_start="24613" e_stop="24859" e_length="247"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24326" stop="24419"/>
              <exon start="24613" stop="24859"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341843" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACAAAACAAAAGAAAAACTTATCACTCAAATATAGAAAATGGAGAAGGCATCAAGAATCTTGTTCTCTCTTTTTGTTGTGTTCATTTTGTTAG : GTTCACCTTCATGTATGGTGATGGGACAAGGCAAGGCATGTAAAAATGTCAAAGATTGTTATACTTTATTTTGCAAACATGAACATCTAGTTTGTTTAGATGGACATTGTATATGCAATGAGTCACCAAAAGAATTTGTAGCTTCTTGCAAAAATGGTGGTGATTGTAAGAATCCATGAAAGGTGTAACAAAATATTTTATCTTATTATTCTAGTAAACTAATAATAAATATAGCTATTACCATTTT</gDNA_template>
            <first_frame> H  K  T  K  E  K  L  I  T  Q  I  *  K  M  E  K  A  S  R  I  L  F  S  L  F  V  V  F  I  L  L   : G  S  P  S  C  M  V  M  G  Q  G  K  A  C  K  N  V  K  D  C  Y  T  L  F  C  K  H  E  H  L  V  C  L  D  G  H  C  I  C  N  E  S  P  K  E  F  V  A  S  C  K  N  G  G  D  C  K  N  P  *  K  V  *  Q  N  I  L  S  Y  Y  S  S  K  L  I  I  N  I  A  I  T  I   </first_frame>
            <second_frame>  T  K  Q  K  K  N  L  S  L  K  Y  R  K  W  R  R  H  Q  E  S  C  S  L  F  L  L  C  S  F  C  *  :  V  H  L  H  V  W  *  W  D  K  A  R  H  V  K  M  S  K  I  V  I  L  Y  F  A  N  M  N  I  *  F  V  *  M  D  I  V  Y  A  M  S  H  Q  K  N  L  *  L  L  A  K  M  V  V  I  V  R  I  H  E  R  C  N  K  I  F  Y  L  I  I  L  V  N  *  *  *  I  *  L  L  P  F  </second_frame>
            <third_frame>   Q  N  K  R  K  T  Y  H  S  N  I  E  N  G  E  G  I  K  N  L  V  L  S  F  C  C  V  H  F  V  R :   F  T  F  M  Y  G  D  G  T  R  Q  G  M  *  K  C  Q  R  L  L  Y  F  I  L  Q  T  *  T  S  S  L  F  R  W  T  L  Y  M  Q  *  V  T  K  R  I  C  S  F  L  Q  K  W  W  *  L  *  E  S  M  K  G  V  T  K  Y  F  I  L  L  F  *  *  T  N  N  K  Y  S  Y  Y  H  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24362" stop="24419"/>
                    <exon start="24613" stop="24791"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>234</number_coding_nucleotides>
                  <number_encoded_amino_acids>78</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KMEKASRILFSLFVVFILLGSPSCMVMGQGKACKNVKDCYTLFCKHEHLVCLDGHCICNESPKEFVASCKNGGDCKNP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="37285" PGL_stop="37880"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37285" e_stop="37369"/>
            <exon e_start="37622" e_stop="37880"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.820" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37285" e_stop="37369" e_length="85"/>
          </exon>
          <intron i_serial="1" don_prob="0.820" acc_prob="0.998">
            <gDNA_intron_boundary i_start="37370" i_stop="37621" i_length="252"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="37622" e_stop="37880" e_length="259"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37285" stop="37369"/>
              <exon start="37622" stop="37880"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329070" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATCATTATCTATTGAGATATAGTATACAAAATGGAGAAGACATCAATTGTTTTGCTCTCCCTTATTGCCTTGATAATTTTGTTAG : GTTCACCATCGTGTATGGCAGCAACGTGTAAAACATCAAAAGATTGTGATCCTAGAGGTTGTGGAAGTCGAGGTATGCTATGCCTTAATGGAGTTTGTGTGTGTCCCTCTGAAATAAGGAAGAATGGCTGCACCAAAGATAGTGATTGTGTAAGCCTATGTCCTCCTAAAACTTTGCCATCTTGTAATAAAGGAATTTGCTTTTGTGGACATCATGTATAACCTAATACATGTTTGAGTTATAAGAGAACATTTTTTTT</gDNA_template>
            <first_frame> I  I  I  Y  *  D  I  V  Y  K  M  E  K  T  S  I  V  L  L  S  L  I  A  L  I  I  L  L   : G  S  P  S  C  M  A  A  T  C  K  T  S  K  D  C  D  P  R  G  C  G  S  R  G  M  L  C  L  N  G  V  C  V  C  P  S  E  I  R  K  N  G  C  T  K  D  S  D  C  V  S  L  C  P  P  K  T  L  P  S  C  N  K  G  I  C  F  C  G  H  H  V  *  P  N  T  C  L  S  Y  K  R  T  F  F   </first_frame>
            <second_frame>  S  L  S  I  E  I  *  Y  T  K  W  R  R  H  Q  L  F  C  S  P  L  L  P  *  *  F  C  *  :  V  H  H  R  V  W  Q  Q  R  V  K  H  Q  K  I  V  I  L  E  V  V  E  V  E  V  C  Y  A  L  M  E  F  V  C  V  P  L  K  *  G  R  M  A  A  P  K  I  V  I  V  *  A  Y  V  L  L  K  L  C  H  L  V  I  K  E  F  A  F  V  D  I  M  Y  N  L  I  H  V  *  V  I  R  E  H  F  F  </second_frame>
            <third_frame>   H  Y  L  L  R  Y  S  I  Q  N  G  E  D  I  N  C  F  A  L  P  Y  C  L  D  N  F  V  R :   F  T  I  V  Y  G  S  N  V  *  N  I  K  R  L  *  S  *  R  L  W  K  S  R  Y  A  M  P  *  W  S  L  C  V  S  L  *  N  K  E  E  W  L  H  Q  R  *  *  L  C  K  P  M  S  S  *  N  F  A  I  L  *  *  R  N  L  L  L  W  T  S  C  I  T  *  Y  M  F  E  L  *  E  N  I  F  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37300" stop="37369"/>
                    <exon start="37622" stop="37842"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>288</number_coding_nucleotides>
                  <number_encoded_amino_acids>96</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DIVYKMEKTSIVLLSLIALIILLGSPSCMAATCKTSKDCDPRGCGSRGMLCLNGVCVCPSEIRKNGCTKDSDCVSLCPPKTLPSCNKGICFCGHHV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="42127" PGL_stop="39226"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="42127" e_stop="42059"/>
            <exon e_start="41830" e_stop="41677"/>
            <exon e_start="39727" e_stop="39226"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="0.895" e_score="1.000"/>
          <exon-intron don_prob="0.804" acc_prob="0.669" e_score="1.000"/>
          <exon-only e_score="0.986"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="42127" e_stop="42059" e_length="69"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="0.895">
            <gDNA_intron_boundary i_start="42058" i_stop="41831" i_length="228"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="41830" e_stop="41677" e_length="154"/>
          </exon>
          <intron i_serial="2" don_prob="0.804" acc_prob="0.669">
            <gDNA_intron_boundary i_start="41676" i_stop="39728" i_length="1949"/>
          </intron>
          <exon e_serial="3" e_score="0.986">
            <gDNA_exon_boundary e_start="39727" e_stop="39226" e_length="502"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="42127" stop="42059"/>
              <exon start="41830" stop="41677"/>
              <exon start="39727" stop="39226"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329322" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATTAAGACAAATATTTGAAGAAGGACAGAGCCTTCAGCTCCAGTTCCCTGCTGAGGATCTTGGTTTCAG : GTATCGGAAAGGAGTATTGGTGTCTGAAGATGACGTTGTGGTGGATGTGCATGAAGCACCAACAGGACGAAGAAGGGATTATATTCCTTGCTCAGAACCTGGATCAAGGCTCCCTCATATGAACGTTGAACTGTTTTCTAAACCGTCAAGCAAG : GAAATATTATCTACTCTAGACCTTGTATCTATAGATAAGGTTGAGTTTATCCTTATAATTGCGCCATTCAAGGAGTCATACTGTCTAGCTCGAGCTGCACTAGAGGTGGCCAACAAATTTAAACTCCATTTAAAGGTTTGTGTAATGTGGCCAAACGGAAGTATTGACGGAGCTGGAAGAACTGAGGCTGCATTGACACCCTGGAAATCTTTTGAAGAAGTTGTGGAAGTGAAGAGGTCATCGGATTCACCATCCTGGTGGGACATCTGTCAAATGACAGACAGAGGAGCCATATTAGTGAGACCTGATGAACACGTTGCTTGGCGTTCAAAATCCAGAATTGCAGATCCCATCATGACGATGAAAAACATTTTCCACATTGTTACAGGAGTTGATTGCACGTGATAACACCTTTGAAGAAATTTTTACCCCCATTTATGTATTGTAGTCTTGACATTCATTCTCTGATATATATTAGCTAGATTACAAGGTTGAAGTACTT</gDNA_template>
            <first_frame> I  K  T  N  I  *  R  R  T  E  P  S  A  P  V  P  C  *  G  S  W  F  Q  :  V  S  E  R  S  I  G  V  *  R  *  R  C  G  G  C  A  *  S  T  N  R  T  K  K  G  L  Y  S  L  L  R  T  W  I  K  A  P  S  Y  E  R  *  T  V  F  *  T  V  K  Q   : G  N  I  I  Y  S  R  P  C  I  Y  R  *  G  *  V  Y  P  Y  N  C  A  I  Q  G  V  I  L  S  S  S  S  C  T  R  G  G  Q  Q  I  *  T  P  F  K  G  L  C  N  V  A  K  R  K  Y  *  R  S  W  K  N  *  G  C  I  D  T  L  E  I  F  *  R  S  C  G  S  E  E  V  I  G  F  T  I  L  V  G  H  L  S  N  D  R  Q  R  S  H  I  S  E  T  *  *  T  R  C  L  A  F  K  I  Q  N  C  R  S  H  H  D  D  E  K  H  F  P  H  C  Y  R  S  *  L  H  V  I  T  P  L  K  K  F  L  P  P  F  M  Y  C  S  L  D  I  H  S  L  I  Y  I  S  *  I  T  R  L  K  Y   </first_frame>
            <second_frame>  L  R  Q  I  F  E  E  G  Q  S  L  Q  L  Q  F  P  A  E  D  L  G  F  R :   Y  R  K  G  V  L  V  S  E  D  D  V  V  V  D  V  H  E  A  P  T  G  R  R  R  D  Y  I  P  C  S  E  P  G  S  R  L  P  H  M  N  V  E  L  F  S  K  P  S  S  K  :  E  I  L  S  T  L  D  L  V  S  I  D  K  V  E  F  I  L  I  I  A  P  F  K  E  S  Y  C  L  A  R  A  A  L  E  V  A  N  K  F  K  L  H  L  K  V  C  V  M  W  P  N  G  S  I  D  G  A  G  R  T  E  A  A  L  T  P  W  K  S  F  E  E  V  V  E  V  K  R  S  S  D  S  P  S  W  W  D  I  C  Q  M  T  D  R  G  A  I  L  V  R  P  D  E  H  V  A  W  R  S  K  S  R  I  A  D  P  I  M  T  M  K  N  I  F  H  I  V  T  G  V  D  C  T  *  *  H  L  *  R  N  F  Y  P  H  L  C  I  V  V  L  T  F  I  L  *  Y  I  L  A  R  L  Q  G  *  S  T  </second_frame>
            <third_frame>   *  D  K  Y  L  K  K  D  R  A  F  S  S  S  S  L  L  R  I  L  V  S   : G  I  G  K  E  Y  W  C  L  K  M  T  L  W  W  M  C  M  K  H  Q  Q  D  E  E  G  I  I  F  L  A  Q  N  L  D  Q  G  S  L  I  *  T  L  N  C  F  L  N  R  Q  A  R :   K  Y  Y  L  L  *  T  L  Y  L  *  I  R  L  S  L  S  L  *  L  R  H  S  R  S  H  T  V  *  L  E  L  H  *  R  W  P  T  N  L  N  S  I  *  R  F  V  *  C  G  Q  T  E  V  L  T  E  L  E  E  L  R  L  H  *  H  P  G  N  L  L  K  K  L  W  K  *  R  G  H  R  I  H  H  P  G  G  T  S  V  K  *  Q  T  E  E  P  Y  *  *  D  L  M  N  T  L  L  G  V  Q  N  P  E  L  Q  I  P  S  *  R  *  K  T  F  S  T  L  L  Q  E  L  I  A  R  D  N  T  F  E  E  I  F  T  P  I  Y  V  L  *  S  *  H  S  F  S  D  I  Y  *  L  D  Y  K  V  E  V  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="42126" stop="42059"/>
                    <exon start="41830" stop="41677"/>
                    <exon start="39727" stop="39323"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>624</number_coding_nucleotides>
                  <number_encoded_amino_acids>208</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LRQIFEEGQSLQLQFPAEDLGFRYRKGVLVSEDDVVVDVHEAPTGRRRDYIPCSEPGSRLPHMNVELFSKPSSKEILSTLDLVSIDKVEFILIIAPFKESYCLARAALEVANKFKLHLKVCVMWPNGSIDGAGRTEAALTPWKSFEEVVEVKRSSDSPSWWDICQMTDRGAILVRPDEHVAWRSKSRIADPIMTMKNIFHIVTGVDCT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="49695" PGL_stop="50179"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="49695" e_stop="50179"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="49695" e_stop="50179" e_length="485"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="49695" stop="50179"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346102" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CACTGATGACCGATAAGGGTATTAGAAAAGATCCGGGTTGTAGTTTAATTGAAATTAATGGGGTTTTCCATGAGTTTTTCGCTGGAGATACATCTCATTTGCATACTAGAGAAATTTATGAGTTTTTGGATGTTATAGACAAAAGACTCCTAGCAGCAGGGTATGTTCCTGATCTGTCACACGCATCAACCGTTGATGAACTTGATAATGGGAAGAGACAGTCGCTTAAACTGCACAGTGAGAGACTTGCCATTGCTTATGGACTTCTGAAACTAAAACCAGGTACTCCTTTACGCATTTTCAAGAATTTGCGCATATGCAGTGATTGTCACAATGTAACCAAATTAATTTCGAAAGTCTTTGATGTTGAAATTATTGTTAGAGATCGTGTTCGGTTTCATCACTTTAGGAATGGGTCCTGTACCTGCAAAGATTATTGGTGAACATAATGTATACTAACATTATATGAATACAATTGTCAATTC</gDNA_template>
            <first_frame> H  *  *  P  I  R  V  L  E  K  I  R  V  V  V  *  L  K  L  M  G  F  S  M  S  F  S  L  E  I  H  L  I  C  I  L  E  K  F  M  S  F  W  M  L  *  T  K  D  S  *  Q  Q  G  M  F  L  I  C  H  T  H  Q  P  L  M  N  L  I  M  G  R  D  S  R  L  N  C  T  V  R  D  L  P  L  L  M  D  F  *  N  *  N  Q  V  L  L  Y  A  F  S  R  I  C  A  Y  A  V  I  V  T  M  *  P  N  *  F  R  K  S  L  M  L  K  L  L  L  E  I  V  F  G  F  I  T  L  G  M  G  P  V  P  A  K  I  I  G  E  H  N  V  Y  *  H  Y  M  N  T  I  V  N   </first_frame>
            <second_frame>  T  D  D  R  *  G  Y  *  K  R  S  G  L  *  F  N  *  N  *  W  G  F  P  *  V  F  R  W  R  Y  I  S  F  A  Y  *  R  N  L  *  V  F  G  C  Y  R  Q  K  T  P  S  S  R  V  C  S  *  S  V  T  R  I  N  R  *  *  T  *  *  W  E  E  T  V  A  *  T  A  Q  *  E  T  C  H  C  L  W  T  S  E  T  K  T  R  Y  S  F  T  H  F  Q  E  F  A  H  M  Q  *  L  S  Q  C  N  Q  I  N  F  E  S  L  *  C  *  N  Y  C  *  R  S  C  S  V  S  S  L  *  E  W  V  L  Y  L  Q  R  L  L  V  N  I  M  Y  T  N  I  I  *  I  Q  L  S  I  </second_frame>
            <third_frame>   L  M  T  D  K  G  I  R  K  D  P  G  C  S  L  I  E  I  N  G  V  F  H  E  F  F  A  G  D  T  S  H  L  H  T  R  E  I  Y  E  F  L  D  V  I  D  K  R  L  L  A  A  G  Y  V  P  D  L  S  H  A  S  T  V  D  E  L  D  N  G  K  R  Q  S  L  K  L  H  S  E  R  L  A  I  A  Y  G  L  L  K  L  K  P  G  T  P  L  R  I  F  K  N  L  R  I  C  S  D  C  H  N  V  T  K  L  I  S  K  V  F  D  V  E  I  I  V  R  D  R  V  R  F  H  H  F  R  N  G  S  C  T  C  K  D  Y  W  *  T  *  C  I  L  T  L  Y  E  Y  N  C  Q  F </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="49697" stop="50137"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>438</number_coding_nucleotides>
                  <number_encoded_amino_acids>146</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LMTDKGIRKDPGCSLIEINGVFHEFFAGDTSHLHTREIYEFLDVIDKRLLAAGYVPDLSHASTVDELDNGKRQSLKLHSERLAIAYGLLKLKPGTPLRIFKNLRICSDCHNVTKLISKVFDVEIIVRDRVRFHHFRNGSCTCKDYW*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="-" PGL_start="65726" PGL_stop="59434"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65726" e_stop="65387"/>
            <exon e_start="64782" e_stop="64432"/>
            <exon e_start="62321" e_stop="61719"/>
            <exon e_start="60552" e_stop="60261"/>
            <exon e_start="59697" e_stop="59434"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.995" e_score="0.994"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.945" e_score="0.997"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="65726" e_stop="65387" e_length="340"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.995">
            <gDNA_intron_boundary i_start="65386" i_stop="64783" i_length="604"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="64782" e_stop="64432" e_length="351"/>
          </exon>
          <intron i_serial="2" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="64431" i_stop="62322" i_length="2110"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62321" e_stop="61719" e_length="603"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.996">
            <gDNA_intron_boundary i_start="61718" i_stop="60553" i_length="1166"/>
          </intron>
          <exon e_serial="4" e_score="0.997">
            <gDNA_exon_boundary e_start="60552" e_stop="60261" e_length="292"/>
          </exon>
          <intron i_serial="4" don_prob="0.987" acc_prob="0.945">
            <gDNA_intron_boundary i_start="60260" i_stop="59698" i_length="563"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="59697" e_stop="59434" e_length="264"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65726" stop="65387"/>
              <exon start="64782" stop="64432"/>
              <exon start="62321" stop="61719"/>
              <exon start="60552" stop="60261"/>
              <exon start="59697" stop="59434"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U321103" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTCCATAATAAATCCATTATTAATATTCCTCTTCAATTTTTTTTTTTTACTTAAATTCCATATATATTCATCACTAATTACAATTTTTTTTTATTAAAATGGATTTTTTCTACAAAGCCAAAGCTGTAAAATTAAAAAGTCATCTAGACAAATACCTTGTAGCCGATGATGATCAAGAAAATATCCGACAAAGCCGAAACGGCTCATCAAGAAAAGCCCGGTGGCTTGTTGAACTTGTTGAAGCCGAAAACAGCCACTTTATACGGCTTAAAAGTGGCTCCGGCAAGTATCTCACGGCTTCCGACGAGCCGTTTCTTCTTGGCATGACCGGAAAAAAG : GTAATTCAAACTTTGCCCGAAGAAATGAAGGACTTGAGAATCGAATGGGAAGTAATAAGGGATGGATTTCAAGTAAAATTAAGGGGTTTTGGAGGAAAATATTTACGTGCAAATGGAGGAATGCCACCATGGAGAAATAAAGTAACACATGATAATCCATATAGTGGTAGTACACAAAATTGGATTTTGTGGAACGTTGAACCTATTGATGTGCCCGAAAATGAATCGTTGACGGAATATTTAACTATGGTTTCAAGTTTTTCATCGATTTCTGATGAGCTTTTAAGCCTGGATTTAGGATCTCCGACTTCTGTACATTCAAGTTTTTCATTCTCACCTAGGAGGGCTAAG : ATTTCTTTACCAAAAAGATCAGCAATGGAGCTATTTCACAAAGCAAAAGCTGTTCGTTTACAGAGTCACCATGAGAAGTACTTAACAGCTGAAGAAGATGAAGAATCAGTGACTCAAGATCGTAACGGAGCATCAAAAAACGCGAAATGGACAGTTGAATTTGTTGAAAAAACCGAAAATGTTATTCGATTGAAGAGTTGTTATGGGAAATATTTAACAGCTTCGAATCAGCCATTTCTTCTGGGTATGACTGGTAGAAAAGTTCTTCAAACTTTGCCTAATCGACTTGATTCTTCAATTGAATGGGAACCCATTAGAGAAGGACATCAAGTTAAGCTGAGGACGAGATATGGGCAATTTTTGAGGGGAAATGGGGGTCTTCCTCCATGGAGAAATTCTGTTACTCATGATATTCCTCATAGGACGAAAACTCAAGATTGGGTTCTTTGGGATGTTCATGTTGTTGAAATTTTGGCGCATTCGACGGCGGAGACGGTGGCGGAGACGACGGTGGTGGGTGGTAATTCTGATTCGTTTGCTTCTGAATCGAGTTCTGCTACTACTACTGGTTCATCAAAATCTTACAGCTTTTCGAGACAAGAG : TCAAGTGATTCATTGATTAGTTCACCGCCTAAGTTGGTAGATGGAAGGCTTATATATTATCACGTTACGGATGAATTTGGAGAAATTGACGAAGGAGCCGAGGGACTTTGCATAACTTTTAAGGGAAATAGTGTTGAGGATCTAAAGAAGAGATTGGAGGAGGAAACTGGGCTCGAGGATATTACTGTGTGTACTCGGAGTGCTTTGAATGGGAAGCTTTATCCTCTCCGTTTGCAGCTTCCTCCCAACAACGCAAATATGAACGTTATTATTTTGCCATCTTCATCTAAAG : AAGCTAGTGATATTGCATAACCAAGAAGGCCATTGTAGCCCTACTCGTGGAGCACTTATCGCGGATTGTTGCAGTAGATGGATTTTTGTATCAGTAAAATCGCGTAAACGTGTATCTCCATTGTTTATTAAGCATTTGTATATAAGGTTTTGAGTATTCAGAGAGATATACACAATATCTGCTCTTGATGTTAATATCATCATCATACATATACACTTCCACAGAATAATTGAAAATTGAAATCTGGTGGAGTTTTTAGTTCAT</gDNA_template>
            <first_frame> L  S  I  I  N  P  L  L  I  F  L  F  N  F  F  F  L  L  K  F  H  I  Y  S  S  L  I  T  I  F  F  Y  *  N  G  F  F  L  Q  S  Q  S  C  K  I  K  K  S  S  R  Q  I  P  C  S  R  *  *  S  R  K  Y  P  T  K  P  K  R  L  I  K  K  S  P  V  A  C  *  T  C  *  S  R  K  Q  P  L  Y  T  A  *  K  W  L  R  Q  V  S  H  G  F  R  R  A  V  S  S  W  H  D  R  K  K   : G  N  S  N  F  A  R  R  N  E  G  L  E  N  R  M  G  S  N  K  G  W  I  S  S  K  I  K  G  F  W  R  K  I  F  T  C  K  W  R  N  A  T  M  E  K  *  S  N  T  *  *  S  I  *  W  *  Y  T  K  L  D  F  V  E  R  *  T  Y  *  C  A  R  K  *  I  V  D  G  I  F  N  Y  G  F  K  F  F  I  D  F  *  *  A  F  K  P  G  F  R  I  S  D  F  C  T  F  K  F  F  I  L  T  *  E  G  *   : D  F  F  T  K  K  I  S  N  G  A  I  S  Q  S  K  S  C  S  F  T  E  S  P  *  E  V  L  N  S  *  R  R  *  R  I  S  D  S  R  S  *  R  S  I  K  K  R  E  M  D  S  *  I  C  *  K  N  R  K  C  Y  S  I  E  E  L  L  W  E  I  F  N  S  F  E  S  A  I  S  S  G  Y  D  W  *  K  S  S  S  N  F  A  *  S  T  *  F  F  N  *  M  G  T  H  *  R  R  T  S  S  *  A  E  D  E  I  W  A  I  F  E  G  K  W  G  S  S  S  M  E  K  F  C  Y  S  *  Y  S  S  *  D  E  N  S  R  L  G  S  L  G  C  S  C  C  *  N  F  G  A  F  D  G  G  D  G  G  G  D  D  G  G  G  W  *  F  *  F  V  C  F  *  I  E  F  C  Y  Y  Y  W  F  I  K  I  L  Q  L  F  E  T  R   : V  K  *  F  I  D  *  F  T  A  *  V  G  R  W  K  A  Y  I  L  S  R  Y  G  *  I  W  R  N  *  R  R  S  R  G  T  L  H  N  F  *  G  K  *  C  *  G  S  K  E  E  I  G  G  G  N  W  A  R  G  Y  Y  C  V  Y  S  E  C  F  E  W  E  A  L  S  S  P  F  A  A  S  S  Q  Q  R  K  Y  E  R  Y  Y  F  A  I  F  I  *  R :   S  *  *  Y  C  I  T  K  K  A  I  V  A  L  L  V  E  H  L  S  R  I  V  A  V  D  G  F  L  Y  Q  *  N  R  V  N  V  Y  L  H  C  L  L  S  I  C  I  *  G  F  E  Y  S  E  R  Y  T  Q  Y  L  L  L  M  L  I  S  S  S  Y  I  Y  T  S  T  E  *  L  K  I  E  I  W  W  S  F  *  F   </first_frame>
            <second_frame>  F  P  *  *  I  H  Y  *  Y  S  S  S  I  F  F  F  Y  L  N  S  I  Y  I  H  H  *  L  Q  F  F  F  I  K  M  D  F  F  Y  K  A  K  A  V  K  L  K  S  H  L  D  K  Y  L  V  A  D  D  D  Q  E  N  I  R  Q  S  R  N  G  S  S  R  K  A  R  W  L  V  E  L  V  E  A  E  N  S  H  F  I  R  L  K  S  G  S  G  K  Y  L  T  A  S  D  E  P  F  L  L  G  M  T  G  K  K  :  V  I  Q  T  L  P  E  E  M  K  D  L  R  I  E  W  E  V  I  R  D  G  F  Q  V  K  L  R  G  F  G  G  K  Y  L  R  A  N  G  G  M  P  P  W  R  N  K  V  T  H  D  N  P  Y  S  G  S  T  Q  N  W  I  L  W  N  V  E  P  I  D  V  P  E  N  E  S  L  T  E  Y  L  T  M  V  S  S  F  S  S  I  S  D  E  L  L  S  L  D  L  G  S  P  T  S  V  H  S  S  F  S  F  S  P  R  R  A  K  :  I  S  L  P  K  R  S  A  M  E  L  F  H  K  A  K  A  V  R  L  Q  S  H  H  E  K  Y  L  T  A  E  E  D  E  E  S  V  T  Q  D  R  N  G  A  S  K  N  A  K  W  T  V  E  F  V  E  K  T  E  N  V  I  R  L  K  S  C  Y  G  K  Y  L  T  A  S  N  Q  P  F  L  L  G  M  T  G  R  K  V  L  Q  T  L  P  N  R  L  D  S  S  I  E  W  E  P  I  R  E  G  H  Q  V  K  L  R  T  R  Y  G  Q  F  L  R  G  N  G  G  L  P  P  W  R  N  S  V  T  H  D  I  P  H  R  T  K  T  Q  D  W  V  L  W  D  V  H  V  V  E  I  L  A  H  S  T  A  E  T  V  A  E  T  T  V  V  G  G  N  S  D  S  F  A  S  E  S  S  S  A  T  T  T  G  S  S  K  S  Y  S  F  S  R  Q  E  :  S  S  D  S  L  I  S  S  P  P  K  L  V  D  G  R  L  I  Y  Y  H  V  T  D  E  F  G  E  I  D  E  G  A  E  G  L  C  I  T  F  K  G  N  S  V  E  D  L  K  K  R  L  E  E  E  T  G  L  E  D  I  T  V  C  T  R  S  A  L  N  G  K  L  Y  P  L  R  L  Q  L  P  P  N  N  A  N  M  N  V  I  I  L  P  S  S  S  K   : E  A  S  D  I  A  *  P  R  R  P  L  *  P  Y  S  W  S  T  Y  R  G  L  L  Q  *  M  D  F  C  I  S  K  I  A  *  T  C  I  S  I  V  Y  *  A  F  V  Y  K  V  L  S  I  Q  R  D  I  H  N  I  C  S  *  C  *  Y  H  H  H  T  Y  T  L  P  Q  N  N  *  K  L  K  S  G  G  V  F  S  S  </second_frame>
            <third_frame>   F  H  N  K  S  I  I  N  I  P  L  Q  F  F  F  F  T  *  I  P  Y  I  F  I  T  N  Y  N  F  F  L  L  K  W  I  F  S  T  K  P  K  L  *  N  *  K  V  I  *  T  N  T  L  *  P  M  M  I  K  K  I  S  D  K  A  E  T  A  H  Q  E  K  P  G  G  L  L  N  L  L  K  P  K  T  A  T  L  Y  G  L  K  V  A  P  A  S  I  S  R  L  P  T  S  R  F  F  L  A  *  P  E  K  R :   *  F  K  L  C  P  K  K  *  R  T  *  E  S  N  G  K  *  *  G  M  D  F  K  *  N  *  G  V  L  E  E  N  I  Y  V  Q  M  E  E  C  H  H  G  E  I  K  *  H  M  I  I  H  I  V  V  V  H  K  I  G  F  C  G  T  L  N  L  L  M  C  P  K  M  N  R  *  R  N  I  *  L  W  F  Q  V  F  H  R  F  L  M  S  F  *  A  W  I  *  D  L  R  L  L  Y  I  Q  V  F  H  S  H  L  G  G  L  R :   F  L  Y  Q  K  D  Q  Q  W  S  Y  F  T  K  Q  K  L  F  V  Y  R  V  T  M  R  S  T  *  Q  L  K  K  M  K  N  Q  *  L  K  I  V  T  E  H  Q  K  T  R  N  G  Q  L  N  L  L  K  K  P  K  M  L  F  D  *  R  V  V  M  G  N  I  *  Q  L  R  I  S  H  F  F  W  V  *  L  V  E  K  F  F  K  L  C  L  I  D  L  I  L  Q  L  N  G  N  P  L  E  K  D  I  K  L  S  *  G  R  D  M  G  N  F  *  G  E  M  G  V  F  L  H  G  E  I  L  L  L  M  I  F  L  I  G  R  K  L  K  I  G  F  F  G  M  F  M  L  L  K  F  W  R  I  R  R  R  R  R  W  R  R  R  R  W  W  V  V  I  L  I  R  L  L  L  N  R  V  L  L  L  L  L  V  H  Q  N  L  T  A  F  R  D  K  S :   Q  V  I  H  *  L  V  H  R  L  S  W  *  M  E  G  L  Y  I  I  T  L  R  M  N  L  E  K  L  T  K  E  P  R  D  F  A  *  L  L  R  E  I  V  L  R  I  *  R  R  D  W  R  R  K  L  G  S  R  I  L  L  C  V  L  G  V  L  *  M  G  S  F  I  L  S  V  C  S  F  L  P  T  T  Q  I  *  T  L  L  F  C  H  L  H  L  K  :  K  L  V  I  L  H  N  Q  E  G  H  C  S  P  T  R  G  A  L  I  A  D  C  C  S  R  W  I  F  V  S  V  K  S  R  K  R  V  S  P  L  F  I  K  H  L  Y  I  R  F  *  V  F  R  E  I  Y  T  I  S  A  L  D  V  N  I  I  I  I  H  I  H  F  H  R  I  I  E  N  *  N  L  V  E  F  L  V  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="65647" stop="65387"/>
                    <exon start="64782" stop="64432"/>
                    <exon start="62321" stop="61719"/>
                    <exon start="60552" stop="60261"/>
                    <exon start="59697" stop="59678"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1524</number_coding_nucleotides>
                  <number_encoded_amino_acids>508</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LQFFFIKMDFFYKAKAVKLKSHLDKYLVADDDQENIRQSRNGSSRKARWLVELVEAENSHFIRLKSGSGKYLTASDEPFLLGMTGKKVIQTLPEEMKDLRIEWEVIRDGFQVKLRGFGGKYLRANGGMPPWRNKVTHDNPYSGSTQNWILWNVEPIDVPENESLTEYLTMVSSFSSISDELLSLDLGSPTSVHSSFSFSPRRAKISLPKRSAMELFHKAKAVRLQSHHEKYLTAEEDEESVTQDRNGASKNAKWTVEFVEKTENVIRLKSCYGKYLTASNQPFLLGMTGRKVLQTLPNRLDSSIEWEPIREGHQVKLRTRYGQFLRGNGGLPPWRNSVTHDIPHRTKTQDWVLWDVHVVEILAHSTAETVAETTVVGGNSDSFASESSSATTTGSSKSYSFSRQESSDSLISSPPKLVDGRLIYYHVTDEFGEIDEGAEGLCITFKGNSVEDLKKRLEEETGLEDITVCTRSALNGKLYPLRLQLPPNNANMNVIILPSSSKEASDIA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="-" PGL_start="79882" PGL_stop="75083"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="79882" e_stop="79855"/>
            <exon e_start="79632" e_stop="79489"/>
            <exon e_start="78925" e_stop="78831"/>
            <exon e_start="78748" e_stop="78619"/>
            <exon e_start="78541" e_stop="78437"/>
            <exon e_start="77889" e_stop="77783"/>
            <exon e_start="77708" e_stop="77657"/>
            <exon e_start="77060" e_stop="76971"/>
            <exon e_start="76877" e_stop="76793"/>
            <exon e_start="76392" e_stop="76328"/>
            <exon e_start="75532" e_stop="75083"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.979" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.968" acc_prob="0.625" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.606" e_score="1.000"/>
          <exon-intron don_prob="0.958" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.458" acc_prob="0.681" e_score="1.000"/>
          <exon-intron don_prob="0.685" acc_prob="0.943" e_score="1.000"/>
          <exon-intron don_prob="0.982" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.978" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.956" acc_prob="0.984" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.985" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="79882" e_stop="79855" e_length="28"/>
          </exon>
          <intron i_serial="1" don_prob="0.979" acc_prob="0.982">
            <gDNA_intron_boundary i_start="79854" i_stop="79633" i_length="222"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="79632" e_stop="79489" e_length="144"/>
          </exon>
          <intron i_serial="2" don_prob="0.968" acc_prob="0.625">
            <gDNA_intron_boundary i_start="79488" i_stop="78926" i_length="563"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="78925" e_stop="78831" e_length="95"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.606">
            <gDNA_intron_boundary i_start="78830" i_stop="78749" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="78748" e_stop="78619" e_length="130"/>
          </exon>
          <intron i_serial="4" don_prob="0.958" acc_prob="0.990">
            <gDNA_intron_boundary i_start="78618" i_stop="78542" i_length="77"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="78541" e_stop="78437" e_length="105"/>
          </exon>
          <intron i_serial="5" don_prob="0.458" acc_prob="0.681">
            <gDNA_intron_boundary i_start="78436" i_stop="77890" i_length="547"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="77889" e_stop="77783" e_length="107"/>
          </exon>
          <intron i_serial="6" don_prob="0.685" acc_prob="0.943">
            <gDNA_intron_boundary i_start="77782" i_stop="77709" i_length="74"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="77708" e_stop="77657" e_length="52"/>
          </exon>
          <intron i_serial="7" don_prob="0.982" acc_prob="0.996">
            <gDNA_intron_boundary i_start="77656" i_stop="77061" i_length="596"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="77060" e_stop="76971" e_length="90"/>
          </exon>
          <intron i_serial="8" don_prob="0.978" acc_prob="0.996">
            <gDNA_intron_boundary i_start="76970" i_stop="76878" i_length="93"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="76877" e_stop="76793" e_length="85"/>
          </exon>
          <intron i_serial="9" don_prob="0.956" acc_prob="0.984">
            <gDNA_intron_boundary i_start="76792" i_stop="76393" i_length="400"/>
          </intron>
          <exon e_serial="10" e_score="1.000">
            <gDNA_exon_boundary e_start="76392" e_stop="76328" e_length="65"/>
          </exon>
          <intron i_serial="10" don_prob="0.999" acc_prob="0.985">
            <gDNA_intron_boundary i_start="76327" i_stop="75533" i_length="795"/>
          </intron>
          <exon e_serial="11" e_score="0.993">
            <gDNA_exon_boundary e_start="75532" e_stop="75083" e_length="450"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="79882" stop="79855"/>
              <exon start="79632" stop="79489"/>
              <exon start="78925" stop="78831"/>
              <exon start="78748" stop="78619"/>
              <exon start="78541" stop="78437"/>
              <exon start="77889" stop="77783"/>
              <exon start="77708" stop="77657"/>
              <exon start="77060" stop="76971"/>
              <exon start="76877" stop="76793"/>
              <exon start="76392" stop="76328"/>
              <exon start="75532" stop="75083"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319343" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TGATTTGTCTCTGAAACTTGTTGAACAG : GTCCTACCAGTAAATAAACATGGAAGATACATTTATGGCATGCTCGCATTTGCCCTATTGGAGCTTGGTCGATATGCGGAGGCAAAAGAAGCTGCAAAGAAAGGCTTTGAGATTGATAGTGAAGATGCCTGGACACACCATGCT : CTCTGTCATGTTTATCAGTATGAGTGTCGTTTTAAAGAAGCAGTACAATTTATGGAGGAGTGCTCAAGAACCTGGAGTTCTTTGTCATCTTTTAT : GTATACACACAATTGGTGGCATGTTGCGCTTTGTTATATGGAAGGTCATTCGCCCATGGAAAAAGTAAGAGATGTTTATGATCAAAACATCTGGAAAGAGTTGGAAAGAATTGATGCCAGTTTAGCCGAA : GTGTACTTGAATGCTGTTGGTTTGTTACTCCGGGTATATTTACGAGGTGGGATTAATATATTTGGGGACCGTTTAAAGATCCTAGCTGATCGTCTGACAGATAAA : GCATTCTGGTATCTTGAATGGCACCTGGATGTATTGGTGTTATGGGCCCTATCCTATACAGGCGAAGTTTCTAAAGCAGAAGAGTTACTCGAGGGTTTGAAGTCCAG : AATTTCTACCATGACCAAGAAAAAACGAGAATATATGCAAAGAGCTGTGCTG : CTTGCAGAAGTGTTATTCGAATATGGTAAGGGTGAAAATGAACGGGCATTGGAATTGCTCGGACAAACATTTGATGCCATTGACTACAAG : ATTATTGGAGCATCAGACGAGCAGCTTGATGTTTTTAATGAAGTTTGGATCACTATGTTGCTAAACAGTGGTCGGGCTACAAAAG : CTATTGAGGCAATAGAGATGCAGCTAAAAAAGAGGGAAGGAACCCCGTTCTTGTGGCGCCTCCTG : GAAAAAGGTTATTCATCAATGTCAAGAAACCAAGAAGCTATACAAGCAGGCAAAAAAGCTCAGTCATTGGAAGGTGCATACTTCAACTAATCTTGGCAAAAGGATGATAACTATCCAAAATAAACTCTTTTGCACACCTCTCAAATGTTAGTGATTTTCACCTCTTGTATCCCTCTCCTCTAGTAGAATGTGTAGTAAAGTCTCTCCATGTTGTGTATTTATAAGCAGTGTCCCCCCAAGCCAATTCTATCGTTGGTGAGGGCGGAGACACTTGTAGGGAGAACAAGACTCAAAACTCGGAAGTCCTTAAATAATCTCTTTTTTTCATAACGGTGATATTCAGATCAGATTGTTGATTTCATGTACATGTTATCTTTCACCAGCACAGGTAGAGAAGAACTTACAAAATCTTGAATAAATGAAGTAGTATTTTGATTTGTCAATGAAATA</gDNA_template>
            <first_frame> *  F  V  S  E  T  C  *  T   : G  P  T  S  K  *  T  W  K  I  H  L  W  H  A  R  I  C  P  I  G  A  W  S  I  C  G  G  K  R  S  C  K  E  R  L  *  D  *  *  *  R  C  L  D  T  P  C   : S  L  S  C  L  S  V  *  V  S  F  *  R  S  S  T  I  Y  G  G  V  L  K  N  L  E  F  F  V  I  F  Y  :  V  Y  T  Q  L  V  A  C  C  A  L  L  Y  G  R  S  F  A  H  G  K  S  K  R  C  L  *  S  K  H  L  E  R  V  G  K  N  *  C  Q  F  S  R   : S  V  L  E  C  C  W  F  V  T  P  G  I  F  T  R  W  D  *  Y  I  W  G  P  F  K  D  P  S  *  S  S  D  R  *   : S  I  L  V  S  *  M  A  P  G  C  I  G  V  M  G  P  I  L  Y  R  R  S  F  *  S  R  R  V  T  R  G  F  E  V  Q  :  N  F  Y  H  D  Q  E  K  T  R  I  Y  A  K  S  C  A   : A  C  R  S  V  I  R  I  W  *  G  *  K  *  T  G  I  G  I  A  R  T  N  I  *  C  H  *  L  Q   : D  Y  W  S  I  R  R  A  A  *  C  F  *  *  S  L  D  H  Y  V  A  K  Q  W  S  G  Y  K  S :   Y  *  G  N  R  D  A  A  K  K  E  G  R  N  P  V  L  V  A  P  P   : G  K  R  L  F  I  N  V  K  K  P  R  S  Y  T  S  R  Q  K  S  S  V  I  G  R  C  I  L  Q  L  I  L  A  K  G  *  *  L  S  K  I  N  S  F  A  H  L  S  N  V  S  D  F  H  L  L  Y  P  S  P  L  V  E  C  V  V  K  S  L  H  V  V  Y  L  *  A  V  S  P  Q  A  N  S  I  V  G  E  G  G  D  T  C  R  E  N  K  T  Q  N  S  E  V  L  K  *  S  L  F  F  I  T  V  I  F  R  S  D  C  *  F  H  V  H  V  I  F  H  Q  H  R  *  R  R  T  Y  K  I  L  N  K  *  S  S  I  L  I  C  Q  *  N  </first_frame>
            <second_frame>  D  L  S  L  K  L  V  E  Q  :  V  L  P  V  N  K  H  G  R  Y  I  Y  G  M  L  A  F  A  L  L  E  L  G  R  Y  A  E  A  K  E  A  A  K  K  G  F  E  I  D  S  E  D  A  W  T  H  H  A  :  L  C  H  V  Y  Q  Y  E  C  R  F  K  E  A  V  Q  F  M  E  E  C  S  R  T  W  S  S  L  S  S  F  M :   Y  T  H  N  W  W  H  V  A  L  C  Y  M  E  G  H  S  P  M  E  K  V  R  D  V  Y  D  Q  N  I  W  K  E  L  E  R  I  D  A  S  L  A  E  :  V  Y  L  N  A  V  G  L  L  L  R  V  Y  L  R  G  G  I  N  I  F  G  D  R  L  K  I  L  A  D  R  L  T  D  K  :  A  F  W  Y  L  E  W  H  L  D  V  L  V  L  W  A  L  S  Y  T  G  E  V  S  K  A  E  E  L  L  E  G  L  K  S  R :   I  S  T  M  T  K  K  K  R  E  Y  M  Q  R  A  V  L  :  L  A  E  V  L  F  E  Y  G  K  G  E  N  E  R  A  L  E  L  L  G  Q  T  F  D  A  I  D  Y  K  :  I  I  G  A  S  D  E  Q  L  D  V  F  N  E  V  W  I  T  M  L  L  N  S  G  R  A  T  K   : A  I  E  A  I  E  M  Q  L  K  K  R  E  G  T  P  F  L  W  R  L  L  :  E  K  G  Y  S  S  M  S  R  N  Q  E  A  I  Q  A  G  K  K  A  Q  S  L  E  G  A  Y  F  N  *  S  W  Q  K  D  D  N  Y  P  K  *  T  L  L  H  T  S  Q  M  L  V  I  F  T  S  C  I  P  L  L  *  *  N  V  *  *  S  L  S  M  L  C  I  Y  K  Q  C  P  P  K  P  I  L  S  L  V  R  A  E  T  L  V  G  R  T  R  L  K  T  R  K  S  L  N  N  L  F  F  S  *  R  *  Y  S  D  Q  I  V  D  F  M  Y  M  L  S  F  T  S  T  G  R  E  E  L  T  K  S  *  I  N  E  V  V  F  *  F  V  N  E  I </second_frame>
            <third_frame>   I  C  L  *  N  L  L  N  R :   S  Y  Q  *  I  N  M  E  D  T  F  M  A  C  S  H  L  P  Y  W  S  L  V  D  M  R  R  Q  K  K  L  Q  R  K  A  L  R  L  I  V  K  M  P  G  H  T  M  L :   S  V  M  F  I  S  M  S  V  V  L  K  K  Q  Y  N  L  W  R  S  A  Q  E  P  G  V  L  C  H  L  L   : C  I  H  T  I  G  G  M  L  R  F  V  I  W  K  V  I  R  P  W  K  K  *  E  M  F  M  I  K  T  S  G  K  S  W  K  E  L  M  P  V  *  P  K :   C  T  *  M  L  L  V  C  Y  S  G  Y  I  Y  E  V  G  L  I  Y  L  G  T  V  *  R  S  *  L  I  V  *  Q  I  K :   H  S  G  I  L  N  G  T  W  M  Y  W  C  Y  G  P  Y  P  I  Q  A  K  F  L  K  Q  K  S  Y  S  R  V  *  S  P   : E  F  L  P  *  P  R  K  N  E  N  I  C  K  E  L  C  C :   L  Q  K  C  Y  S  N  M  V  R  V  K  M  N  G  H  W  N  C  S  D  K  H  L  M  P  L  T  T  R :   L  L  E  H  Q  T  S  S  L  M  F  L  M  K  F  G  S  L  C  C  *  T  V  V  G  L  Q  K  :  L  L  R  Q  *  R  C  S  *  K  R  G  K  E  P  R  S  C  G  A  S  W :   K  K  V  I  H  Q  C  Q  E  T  K  K  L  Y  K  Q  A  K  K  L  S  H  W  K  V  H  T  S  T  N  L  G  K  R  M  I  T  I  Q  N  K  L  F  C  T  P  L  K  C  *  *  F  S  P  L  V  S  L  S  S  S  R  M  C  S  K  V  S  P  C  C  V  F  I  S  S  V  P  P  S  Q  F  Y  R  W  *  G  R  R  H  L  *  G  E  Q  D  S  K  L  G  S  P  *  I  I  S  F  F  H  N  G  D  I  Q  I  R  L  L  I  S  C  T  C  Y  L  S  P  A  Q  V  E  K  N  L  Q  N  L  E  *  M  K  *  Y  F  D  L  S  M  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="79881" stop="79855"/>
                    <exon start="79632" stop="79489"/>
                    <exon start="78925" stop="78831"/>
                    <exon start="78748" stop="78619"/>
                    <exon start="78541" stop="78437"/>
                    <exon start="77889" stop="77783"/>
                    <exon start="77708" stop="77657"/>
                    <exon start="77060" stop="76971"/>
                    <exon start="76877" stop="76793"/>
                    <exon start="76392" stop="76328"/>
                    <exon start="75532" stop="75443"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>987</number_coding_nucleotides>
                  <number_encoded_amino_acids>329</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DLSLKLVEQVLPVNKHGRYIYGMLAFALLELGRYAEAKEAAKKGFEIDSEDAWTHHALCHVYQYECRFKEAVQFMEECSRTWSSLSSFMYTHNWWHVALCYMEGHSPMEKVRDVYDQNIWKELERIDASLAEVYLNAVGLLLRVYLRGGINIFGDRLKILADRLTDKAFWYLEWHLDVLVLWALSYTGEVSKAEELLEGLKSRISTMTKKKREYMQRAVLLAEVLFEYGKGENERALELLGQTFDAIDYKIIGASDEQLDVFNEVWITMLLNSGRATKAIEAIEMQLKKREGTPFLWRLLEKGYSSMSRNQEAIQAGKKAQSLEGAYFN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="-" PGL_start="81222" PGL_stop="80658"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="81222" e_stop="81113"/>
            <exon e_start="80977" e_stop="80658"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.987" acc_prob="0.998" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="81222" e_stop="81113" e_length="110"/>
          </exon>
          <intron i_serial="1" don_prob="0.987" acc_prob="0.998">
            <gDNA_intron_boundary i_start="81112" i_stop="80978" i_length="135"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="80977" e_stop="80658" e_length="320"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="81222" stop="81113"/>
              <exon start="80977" stop="80658"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346960" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACCCACCAACTTCAAGAAAATGGAAGAATTCAAAGTAGACAAATGGGGTTATCAAGTGAAGACTAGTTCTGATTCTTGCATATCTGCCATTAATTCTTATTATCATCAG : GTACTTAGCTATGGAAGAGAGAGGTCAGTTATATTGGAAGCTCCAAAACAAGACCCAACTTGTGTTTTGGCTAATATTTTGGCTGCTCATTTTCTTTGTTCTGCTGATTCTTCGCGTGCTATGCCACTTCTTGAAGCTGCCAAGTCTTGTCTAGTACAAATTTTGCAACTTTTTGGTTTGTATTTTTGTATTTGGGAGTTTGGTTTTGCTTATTTGTTGTTAATTTTCTTTGTTTAGGAACAAGCTAGCTTGTATGAGAAAGTGGTTTTTGAGGTAGTAAGTTATTTGATTTTACCTAATAGAGATGATGATGTGGCTGT</gDNA_template>
            <first_frame> N  P  P  T  S  R  K  W  K  N  S  K  *  T  N  G  V  I  K  *  R  L  V  L  I  L  A  Y  L  P  L  I  L  I  I  I  R :   Y  L  A  M  E  E  R  G  Q  L  Y  W  K  L  Q  N  K  T  Q  L  V  F  W  L  I  F  W  L  L  I  F  F  V  L  L  I  L  R  V  L  C  H  F  L  K  L  P  S  L  V  *  Y  K  F  C  N  F  L  V  C  I  F  V  F  G  S  L  V  L  L  I  C  C  *  F  S  L  F  R  N  K  L  A  C  M  R  K  W  F  L  R  *  *  V  I  *  F  Y  L  I  E  M  M  M  W  L  </first_frame>
            <second_frame>  T  H  Q  L  Q  E  N  G  R  I  Q  S  R  Q  M  G  L  S  S  E  D  *  F  *  F  L  H  I  C  H  *  F  L  L  S  S   : G  T  *  L  W  K  R  E  V  S  Y  I  G  S  S  K  T  R  P  N  L  C  F  G  *  Y  F  G  C  S  F  S  L  F  C  *  F  F  A  C  Y  A  T  S  *  S  C  Q  V  L  S  S  T  N  F  A  T  F  W  F  V  F  L  Y  L  G  V  W  F  C  L  F  V  V  N  F  L  C  L  G  T  S  *  L  V  *  E  S  G  F  *  G  S  K  L  F  D  F  T  *  *  R  *  *  C  G  C </second_frame>
            <third_frame>   P  T  N  F  K  K  M  E  E  F  K  V  D  K  W  G  Y  Q  V  K  T  S  S  D  S  C  I  S  A  I  N  S  Y  Y  H  Q  :  V  L  S  Y  G  R  E  R  S  V  I  L  E  A  P  K  Q  D  P  T  C  V  L  A  N  I  L  A  A  H  F  L  C  S  A  D  S  S  R  A  M  P  L  L  E  A  A  K  S  C  L  V  Q  I  L  Q  L  F  G  L  Y  F  C  I  W  E  F  G  F  A  Y  L  L  L  I  F  F  V  *  E  Q  A  S  L  Y  E  K  V  V  F  E  V  V  S  Y  L  I  L  P  N  R  D  D  D  V  A   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="81220" stop="81113"/>
                    <exon start="80977" stop="80741"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>342</number_coding_nucleotides>
                  <number_encoded_amino_acids>114</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>PTNFKKMEEFKVDKWGYQVKTSSDSCISAINSYYHQVLSYGRERSVILEAPKQDPTCVLANILAAHFLCSADSSRAMPLLEAAKSCLVQILQLFGLYFCIWEFGFAYLLLIFFV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="-" PGL_start="84789" PGL_stop="83764"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="84789" e_stop="84406"/>
            <exon e_start="84160" e_stop="83764"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.991" e_score="1.000"/>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="84789" e_stop="84406" e_length="384"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.991">
            <gDNA_intron_boundary i_start="84405" i_stop="84161" i_length="245"/>
          </intron>
          <exon e_serial="2" e_score="0.997">
            <gDNA_exon_boundary e_start="84160" e_stop="83764" e_length="397"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="84789" stop="84406"/>
              <exon start="84160" stop="83764"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U324385" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAGAAGCATCAAAAACTCTGCTTATTAGTCATTCTTTCAATATTTGTTGTTGAAGAAGCTAGTCATGGCAACAAATAGTGTAAAGCTTCTAGGTACATGGGCATGCCCGTATGTGTATCGCGTTGAAATAGCCCTCAAGATGAAGTCTATTGAGTATGAGTTTATACAAGAACGTGTGTTTAACAAAAGTGAGTTGCTTCTCAAATCCAATCCTGTTTACAAGAAAATCCCAGTTCTGTTCCACGACGAGAAGCCTATCTGTGAGTCCCTTGTCATCCTTCAGTACATCGATGAAGCTTGGCTTAATGGTCCCGCCATTCTTCCTTCTGATCCCTATGATCGTGCCATAGCACGATTTTGGGCAGCCTATATAGATGAAAAG : TGGTATCCATTGGTAGCGGATTATAGGAACGTGGAAGGAAAGGAAGCAAAAGCAGCTATGGTGGAGAAAATTTCTGAAGGGACTTTGCTGCTGGAGGAAGCTTTTATCAACATGAGCAAAGGTAAATCTTACTTTGGTGGAGATAGTATTGGTTATGTTGACATTGTTTTTGGTAGTTTACTCGGATGGGTTAAGGTAATCGAGATCGTGGATGAATTGAAGATACTAGACGAAACAAAGACGCCTAGCCTAGCTGAATGGGATGAGAAATTTTGCTCGCACAATGTCGTAAAGGATATCATTCCAGAGACTGAAAAACTTGTGGAAATTTATCACAAGTATGTCGAGTTGAAGAAAGCTAACTTGAGTTGATAATGTTGCTGATTTTTCTTTATCT</gDNA_template>
            <first_frame> A  R  S  I  K  N  S  A  Y  *  S  F  F  Q  Y  L  L  L  K  K  L  V  M  A  T  N  S  V  K  L  L  G  T  W  A  C  P  Y  V  Y  R  V  E  I  A  L  K  M  K  S  I  E  Y  E  F  I  Q  E  R  V  F  N  K  S  E  L  L  L  K  S  N  P  V  Y  K  K  I  P  V  L  F  H  D  E  K  P  I  C  E  S  L  V  I  L  Q  Y  I  D  E  A  W  L  N  G  P  A  I  L  P  S  D  P  Y  D  R  A  I  A  R  F  W  A  A  Y  I  D  E  K  :  W  Y  P  L  V  A  D  Y  R  N  V  E  G  K  E  A  K  A  A  M  V  E  K  I  S  E  G  T  L  L  L  E  E  A  F  I  N  M  S  K  G  K  S  Y  F  G  G  D  S  I  G  Y  V  D  I  V  F  G  S  L  L  G  W  V  K  V  I  E  I  V  D  E  L  K  I  L  D  E  T  K  T  P  S  L  A  E  W  D  E  K  F  C  S  H  N  V  V  K  D  I  I  P  E  T  E  K  L  V  E  I  Y  H  K  Y  V  E  L  K  K  A  N  L  S  *  *  C  C  *  F  F  F  I  </first_frame>
            <second_frame>  Q  E  A  S  K  T  L  L  I  S  H  S  F  N  I  C  C  *  R  S  *  S  W  Q  Q  I  V  *  S  F  *  V  H  G  H  A  R  M  C  I  A  L  K  *  P  S  R  *  S  L  L  S  M  S  L  Y  K  N  V  C  L  T  K  V  S  C  F  S  N  P  I  L  F  T  R  K  S  Q  F  C  S  T  T  R  S  L  S  V  S  P  L  S  S  F  S  T  S  M  K  L  G  L  M  V  P  P  F  F  L  L  I  P  M  I  V  P  *  H  D  F  G  Q  P  I  *  M  K  S :   G  I  H  W  *  R  I  I  G  T  W  K  E  R  K  Q  K  Q  L  W  W  R  K  F  L  K  G  L  C  C  W  R  K  L  L  S  T  *  A  K  V  N  L  T  L  V  E  I  V  L  V  M  L  T  L  F  L  V  V  Y  S  D  G  L  R  *  S  R  S  W  M  N  *  R  Y  *  T  K  Q  R  R  L  A  *  L  N  G  M  R  N  F  A  R  T  M  S  *  R  I  S  F  Q  R  L  K  N  L  W  K  F  I  T  S  M  S  S  *  R  K  L  T  *  V  D  N  V  A  D  F  S  L  S </second_frame>
            <third_frame>   K  K  H  Q  K  L  C  L  L  V  I  L  S  I  F  V  V  E  E  A  S  H  G  N  K  *  C  K  A  S  R  Y  M  G  M  P  V  C  V  S  R  *  N  S  P  Q  D  E  V  Y  *  V  *  V  Y  T  R  T  C  V  *  Q  K  *  V  A  S  Q  I  Q  S  C  L  Q  E  N  P  S  S  V  P  R  R  E  A  Y  L  *  V  P  C  H  P  S  V  H  R  *  S  L  A  *  W  S  R  H  S  S  F  *  S  L  *  S  C  H  S  T  I  L  G  S  L  Y  R  *  K   : V  V  S  I  G  S  G  L  *  E  R  G  R  K  G  S  K  S  S  Y  G  G  E  N  F  *  R  D  F  A  A  G  G  S  F  Y  Q  H  E  Q  R  *  I  L  L  W  W  R  *  Y  W  L  C  *  H  C  F  W  *  F  T  R  M  G  *  G  N  R  D  R  G  *  I  E  D  T  R  R  N  K  D  A  *  P  S  *  M  G  *  E  I  L  L  A  Q  C  R  K  G  Y  H  S  R  D  *  K  T  C  G  N  L  S  Q  V  C  R  V  E  E  S  *  L  E  L  I  M  L  L  I  F  L  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="11" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="84759" stop="84406"/>
                    <exon start="84160" stop="83789"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>723</number_coding_nucleotides>
                  <number_encoded_amino_acids>241</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SFFQYLLLKKLVMATNSVKLLGTWACPYVYRVEIALKMKSIEYEFIQERVFNKSELLLKSNPVYKKIPVLFHDEKPICESLVILQYIDEAWLNGPAILPSDPYDRAIARFWAAYIDEKWYPLVADYRNVEGKEAKAAMVEKISEGTLLLEEAFINMSKGKSYFGGDSIGYVDIVFGSLLGWVKVIEIVDELKILDETKTPSLAEWDEKFCSHNVVKDIIPETEKLVEIYHKYVELKKANLS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="-" PGL_start="87266" PGL_stop="85510"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="87266" e_stop="86956"/>
            <exon e_start="86033" e_stop="85510"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.974" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="87266" e_stop="86956" e_length="311"/>
          </exon>
          <intron i_serial="1" don_prob="0.974" acc_prob="0.979">
            <gDNA_intron_boundary i_start="86955" i_stop="86034" i_length="922"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="86033" e_stop="85510" e_length="524"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="87266" stop="86956"/>
              <exon start="86033" stop="85510"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319518" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>ATGATGTGAAACTATTAGGATCATGGCCTAGTACATTTGTTATGAGGCCTCGTATCGCGCTTAACGTAAAATCAGTGTGTTATGATTTCTTGGAGGAACAGTTAAGTTCTAAGAGTGATCTTCTCCTTATATCAAATCCAGTTTACAAGAAAATTCCAGTTCTAATTCATGATGGGAAGTCCATTTGTGAATCACTCAACATTGTTCAGTATATTGATGAAAAATGGACTAATTCTGGTCCCTCTATTCTCCCCTTGGATCCTTATGATCGTGCCATTGCTCGATTTTGGGCATGTTATATTGACGATAAG : TGGTTTCCATTATTCCGTTCCTTTGCGGTTGCCCAAGGAGAGGATGCCATAAAAACAGCACTAGAGCCAGTGTTCGACGGTCTGGTGTTGTTGGAAGACGCCTTCAAGAATTGCAGCAAAGGAAAGAAGTTCTTTGGCGGAGACAAAATTGGATACGTGGACATTGCACTTGGATGCTTCTTAGGTTGGATGAGGGTGATCGAGAAGATGAACAACGTCACACTACTTGATGAAGCCAAGACTCCAGGTTTATACAATTGGGCTGAAGATTTTTGTGCTGATAGTTCTGTCAAAGATGTCATGCCTGAAACTAATAAGCTTGCTGAGGCTGCTAAGAACCTTATACCCAAAATCAGAGCTAATGCATCTAGCTAAATCCACACGCCACGTTTAGCCTATGAAGCCTCGATATCTATTCTTAATCTCTAAAGTCTAGCTAAGACCATATATGGAAATAACATTTGGTATTGTGTAAAAAACTACTAAGAAATGAGTACTATGAAGCCAAGATCTACTATTTATAG</gDNA_template>
            <first_frame> M  M  *  N  Y  *  D  H  G  L  V  H  L  L  *  G  L  V  S  R  L  T  *  N  Q  C  V  M  I  S  W  R  N  S  *  V  L  R  V  I  F  S  L  Y  Q  I  Q  F  T  R  K  F  Q  F  *  F  M  M  G  S  P  F  V  N  H  S  T  L  F  S  I  L  M  K  N  G  L  I  L  V  P  L  F  S  P  W  I  L  M  I  V  P  L  L  D  F  G  H  V  I  L  T  I  S :   G  F  H  Y  S  V  P  L  R  L  P  K  E  R  M  P  *  K  Q  H  *  S  Q  C  S  T  V  W  C  C  W  K  T  P  S  R  I  A  A  K  E  R  S  S  L  A  E  T  K  L  D  T  W  T  L  H  L  D  A  S  *  V  G  *  G  *  S  R  R  *  T  T  S  H  Y  L  M  K  P  R  L  Q  V  Y  T  I  G  L  K  I  F  V  L  I  V  L  S  K  M  S  C  L  K  L  I  S  L  L  R  L  L  R  T  L  Y  P  K  S  E  L  M  H  L  A  K  S  T  R  H  V  *  P  M  K  P  R  Y  L  F  L  I  S  K  V  *  L  R  P  Y  M  E  I  T  F  G  I  V  *  K  T  T  K  K  *  V  L  *  S  Q  D  L  L  F  I  </first_frame>
            <second_frame>  *  C  E  T  I  R  I  M  A  *  Y  I  C  Y  E  A  S  Y  R  A  *  R  K  I  S  V  L  *  F  L  G  G  T  V  K  F  *  E  *  S  S  P  Y  I  K  S  S  L  Q  E  N  S  S  S  N  S  *  W  E  V  H  L  *  I  T  Q  H  C  S  V  Y  *  *  K  M  D  *  F  W  S  L  Y  S  P  L  G  S  L  *  S  C  H  C  S  I  L  G  M  L  Y  *  R  *   : V  V  S  I  I  P  F  L  C  G  C  P  R  R  G  C  H  K  N  S  T  R  A  S  V  R  R  S  G  V  V  G  R  R  L  Q  E  L  Q  Q  R  K  E  V  L  W  R  R  Q  N  W  I  R  G  H  C  T  W  M  L  L  R  L  D  E  G  D  R  E  D  E  Q  R  H  T  T  *  *  S  Q  D  S  R  F  I  Q  L  G  *  R  F  L  C  *  *  F  C  Q  R  C  H  A  *  N  *  *  A  C  *  G  C  *  E  P  Y  T  Q  N  Q  S  *  C  I  *  L  N  P  H  A  T  F  S  L  *  S  L  D  I  Y  S  *  S  L  K  S  S  *  D  H  I  W  K  *  H  L  V  L  C  K  K  L  L  R  N  E  Y  Y  E  A  K  I  Y  Y  L  * </second_frame>
            <third_frame>   D  V  K  L  L  G  S  W  P  S  T  F  V  M  R  P  R  I  A  L  N  V  K  S  V  C  Y  D  F  L  E  E  Q  L  S  S  K  S  D  L  L  L  I  S  N  P  V  Y  K  K  I  P  V  L  I  H  D  G  K  S  I  C  E  S  L  N  I  V  Q  Y  I  D  E  K  W  T  N  S  G  P  S  I  L  P  L  D  P  Y  D  R  A  I  A  R  F  W  A  C  Y  I  D  D  K  :  W  F  P  L  F  R  S  F  A  V  A  Q  G  E  D  A  I  K  T  A  L  E  P  V  F  D  G  L  V  L  L  E  D  A  F  K  N  C  S  K  G  K  K  F  F  G  G  D  K  I  G  Y  V  D  I  A  L  G  C  F  L  G  W  M  R  V  I  E  K  M  N  N  V  T  L  L  D  E  A  K  T  P  G  L  Y  N  W  A  E  D  F  C  A  D  S  S  V  K  D  V  M  P  E  T  N  K  L  A  E  A  A  K  N  L  I  P  K  I  R  A  N  A  S  S  *  I  H  T  P  R  L  A  Y  E  A  S  I  S  I  L  N  L  *  S  L  A  K  T  I  Y  G  N  N  I  W  Y  C  V  K  N  Y  *  E  M  S  T  M  K  P  R  S  T  I  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="87264" stop="86956"/>
                    <exon start="86033" stop="85659"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>681</number_coding_nucleotides>
                  <number_encoded_amino_acids>227</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DVKLLGSWPSTFVMRPRIALNVKSVCYDFLEEQLSSKSDLLLISNPVYKKIPVLIHDGKSICESLNIVQYIDEKWTNSGPSILPLDPYDRAIARFWACYIDDKWFPLFRSFAVAQGEDAIKTALEPVFDGLVLLEDAFKNCSKGKKFFGGDKIGYVDIALGCFLGWMRVIEKMNNVTLLDEAKTPGLYNWAEDFCADSSVKDVMPETNKLAEAAKNLIPKIRANASS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="86650" e_stop="86346"/>
            <exon e_start="86033" e_stop="85515"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.993" acc_prob="0.979" e_score="1.000"/>
          <exon-only e_score="0.998"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="86650" e_stop="86346" e_length="305"/>
          </exon>
          <intron i_serial="1" don_prob="0.993" acc_prob="0.979">
            <gDNA_intron_boundary i_start="86345" i_stop="86034" i_length="312"/>
          </intron>
          <exon e_serial="2" e_score="0.998">
            <gDNA_exon_boundary e_start="86033" e_stop="85515" e_length="519"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="86650" stop="86346"/>
              <exon start="86033" stop="85515"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319517" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGTAAAGCTTCTAGGTTCATGGGCAAGCCCGTTTGTGAACCGCGTTGAACTAGCTCTCAAGATAAAGTCTATTGAGTATGAGTTTATACAACAAAATATGATAAACAAAGGTGAGTTGCTCCTTAAATCCAACCCTGTATACGAGAAAATCCCCGTCCTGATCCATGACGAAAAGCCTATCTGTGAGTCCCTTGTCATCCTTCAGTACATCGATGAAGTTTGGATTAATGATCCCCCGGTTCTTCCGTTTGATCTCTATGATCGTGCCATAGCACGATTTTGGGCAGCCTATATAGATGAAAAG : TGGTTTCCATTATTCCGTTCCTTTGCGGTTGCCCAAGGAGAGGATGCCATAAAAACAGCACTAGAGCCAGTGTTCGACGGTCTGGTGTTGTTGGAAGACGCCTTCAAGAATTGCAGCAAAGGAAAGAAGTTCTTTGGCGGAGACAAAATTGGATACGTGGACATTGCACTTGGATGCTTCTTAGGTTGGATGAGGGTGATCGAGAAGATGAACAACGTCACACTACTTGATGAAGCCAAGACTCCAGGTTTATACAATTGGGCTGAAGATTTTTGTGCTGATAGTTCTGTCAAAGATGTCATGCCTGAAACTAATAAGCTTGCTGAGGCTGCTAAGAACCTTATACCCAAAATCAGAGCTAATGCATCTAGCTAAATCCACACGCCACGTTTAGCCTATGAAGCCTCGATATCTATTCTTAATCTCTAAAGTCTAGCTAAGACCATATATGGAAATAACATTTGGTATTGTGTAAAAAACTACTAAGAAATGAGTACTATGAAGCCAAGATCTACTATT</gDNA_template>
            <first_frame> V  *  S  F  *  V  H  G  Q  A  R  L  *  T  A  L  N  *  L  S  R  *  S  L  L  S  M  S  L  Y  N  K  I  *  *  T  K  V  S  C  S  L  N  P  T  L  Y  T  R  K  S  P  S  *  S  M  T  K  S  L  S  V  S  P  L  S  S  F  S  T  S  M  K  F  G  L  M  I  P  R  F  F  R  L  I  S  M  I  V  P  *  H  D  F  G  Q  P  I  *  M  K  S :   G  F  H  Y  S  V  P  L  R  L  P  K  E  R  M  P  *  K  Q  H  *  S  Q  C  S  T  V  W  C  C  W  K  T  P  S  R  I  A  A  K  E  R  S  S  L  A  E  T  K  L  D  T  W  T  L  H  L  D  A  S  *  V  G  *  G  *  S  R  R  *  T  T  S  H  Y  L  M  K  P  R  L  Q  V  Y  T  I  G  L  K  I  F  V  L  I  V  L  S  K  M  S  C  L  K  L  I  S  L  L  R  L  L  R  T  L  Y  P  K  S  E  L  M  H  L  A  K  S  T  R  H  V  *  P  M  K  P  R  Y  L  F  L  I  S  K  V  *  L  R  P  Y  M  E  I  T  F  G  I  V  *  K  T  T  K  K  *  V  L  *  S  Q  D  L  L   </first_frame>
            <second_frame>  C  K  A  S  R  F  M  G  K  P  V  C  E  P  R  *  T  S  S  Q  D  K  V  Y  *  V  *  V  Y  T  T  K  Y  D  K  Q  R  *  V  A  P  *  I  Q  P  C  I  R  E  N  P  R  P  D  P  *  R  K  A  Y  L  *  V  P  C  H  P  S  V  H  R  *  S  L  D  *  *  S  P  G  S  S  V  *  S  L  *  S  C  H  S  T  I  L  G  S  L  Y  R  *  K   : V  V  S  I  I  P  F  L  C  G  C  P  R  R  G  C  H  K  N  S  T  R  A  S  V  R  R  S  G  V  V  G  R  R  L  Q  E  L  Q  Q  R  K  E  V  L  W  R  R  Q  N  W  I  R  G  H  C  T  W  M  L  L  R  L  D  E  G  D  R  E  D  E  Q  R  H  T  T  *  *  S  Q  D  S  R  F  I  Q  L  G  *  R  F  L  C  *  *  F  C  Q  R  C  H  A  *  N  *  *  A  C  *  G  C  *  E  P  Y  T  Q  N  Q  S  *  C  I  *  L  N  P  H  A  T  F  S  L  *  S  L  D  I  Y  S  *  S  L  K  S  S  *  D  H  I  W  K  *  H  L  V  L  C  K  K  L  L  R  N  E  Y  Y  E  A  K  I  Y  Y  </second_frame>
            <third_frame>   V  K  L  L  G  S  W  A  S  P  F  V  N  R  V  E  L  A  L  K  I  K  S  I  E  Y  E  F  I  Q  Q  N  M  I  N  K  G  E  L  L  L  K  S  N  P  V  Y  E  K  I  P  V  L  I  H  D  E  K  P  I  C  E  S  L  V  I  L  Q  Y  I  D  E  V  W  I  N  D  P  P  V  L  P  F  D  L  Y  D  R  A  I  A  R  F  W  A  A  Y  I  D  E  K  :  W  F  P  L  F  R  S  F  A  V  A  Q  G  E  D  A  I  K  T  A  L  E  P  V  F  D  G  L  V  L  L  E  D  A  F  K  N  C  S  K  G  K  K  F  F  G  G  D  K  I  G  Y  V  D  I  A  L  G  C  F  L  G  W  M  R  V  I  E  K  M  N  N  V  T  L  L  D  E  A  K  T  P  G  L  Y  N  W  A  E  D  F  C  A  D  S  S  V  K  D  V  M  P  E  T  N  K  L  A  E  A  A  K  N  L  I  P  K  I  R  A  N  A  S  S  *  I  H  T  P  R  L  A  Y  E  A  S  I  S  I  L  N  L  *  S  L  A  K  T  I  Y  G  N  N  I  W  Y  C  V  K  N  Y  *  E  M  S  T  M  K  P  R  S  T  I </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="86648" stop="86346"/>
                    <exon start="86033" stop="85659"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>675</number_coding_nucleotides>
                  <number_encoded_amino_acids>225</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKLLGSWASPFVNRVELALKIKSIEYEFIQQNMINKGELLLKSNPVYEKIPVLIHDEKPICESLVILQYIDEVWINDPPVLPFDLYDRAIARFWAAYIDEKWFPLFRSFAVAQGEDAIKTALEPVFDGLVLLEDAFKNCSKGKKFFGGDKIGYVDIALGCFLGWMRVIEKMNNVTLLDEAKTPGLYNWAEDFCADSSVKDVMPETNKLAEAAKNLIPKIRANASS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="+" PGL_start="90267" PGL_stop="91310"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90267" e_stop="90278"/>
            <exon e_start="90608" e_stop="91310"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.900" acc_prob="0.000" e_score="0.667"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.667">
            <gDNA_exon_boundary e_start="90267" e_stop="90278" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="0.900" acc_prob="0.000">
            <gDNA_intron_boundary i_start="90279" i_stop="90607" i_length="329"/>
          </intron>
          <exon e_serial="2" e_score="0.994">
            <gDNA_exon_boundary e_start="90608" e_stop="91310" e_length="703"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90267" stop="90278"/>
              <exon start="90608" stop="91310"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329075" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTATGTTTTTG : ATTTTTGAATTTTACAGTTAGATATATAGAATGGACTGAAATGTTGTGTTCAAAAATGTATGAAAAGTTTAAAATTAAAGAATTGCATAAAGACTAAAAAGAAAGTCAACCAAAAAAAATTAAAACTAAAAATTATATTATAAGCAGCCATGCCAATACCATTCTGTTGTTGCAGAGTTAAGTGCTAATGGGACTGCACCAAATCCATCATTGGTTGGTTTTTCACTCATTTGTGTACTTAAACAGCCAATCTTTGTTGGTCTGGTTCCTTCGAGCTTATACCAGCTCTGATACCATGTTGAATTACGTTACCACCTCCATTTCAAAAGGTTTCATTGCAAGCACCATATGTTGCAGACCTTGGACATTGGGGTAACTATTCGGTTCCTCGAGATAATCCTTATTCACAAAATAAGGATTTGCAGCCTGAAATCTGGGCGTTTGGACTGAGAGACCCTTGGCGCTGTAGCTTTGATTCAGAAAGGCCTTCGAAATTCATCTGTGCAGATGTTGGCCAGGTTCATTGACAATCTCATTTTTGTTGAGACCTATTATATCTCTGTTGGTTAAGATCTTGTCAACAGACATAACATGCTACCTGGTATCTTGACGTGAGTTTCTGAAAATCATTTGAATCATGCAGGATCAGTATGAAGAAGTTGACATCATCACAAAAGGAGGAAACTATGGATGGAGCATGTAT</gDNA_template>
            <first_frame> I  M  F  L  :  I  F  E  F  Y  S  *  I  Y  R  M  D  *  N  V  V  F  K  N  V  *  K  V  *  N  *  R  I  A  *  R  L  K  R  K  S  T  K  K  N  *  N  *  K  L  Y  Y  K  Q  P  C  Q  Y  H  S  V  V  A  E  L  S  A  N  G  T  A  P  N  P  S  L  V  G  F  S  L  I  C  V  L  K  Q  P  I  F  V  G  L  V  P  S  S  L  Y  Q  L  *  Y  H  V  E  L  R  Y  H  L  H  F  K  R  F  H  C  K  H  H  M  L  Q  T  L  D  I  G  V  T  I  R  F  L  E  I  I  L  I  H  K  I  R  I  C  S  L  K  S  G  R  L  D  *  E  T  L  G  A  V  A  L  I  Q  K  G  L  R  N  S  S  V  Q  M  L  A  R  F  I  D  N  L  I  F  V  E  T  Y  Y  I  S  V  G  *  D  L  V  N  R  H  N  M  L  P  G  I  L  T  *  V  S  E  N  H  L  N  H  A  G  S  V  *  R  S  *  H  H  H  K  R  R  K  L  W  M  E  H  V  </first_frame>
            <second_frame>  L  C  F  * :   F  L  N  F  T  V  R  Y  I  E  W  T  E  M  L  C  S  K  M  Y  E  K  F  K  I  K  E  L  H  K  D  *  K  E  S  Q  P  K  K  I  K  T  K  N  Y  I  I  S  S  H  A  N  T  I  L  L  L  Q  S  *  V  L  M  G  L  H  Q  I  H  H  W  L  V  F  H  S  F  V  Y  L  N  S  Q  S  L  L  V  W  F  L  R  A  Y  T  S  S  D  T  M  L  N  Y  V  T  T  S  I  S  K  G  F  I  A  S  T  I  C  C  R  P  W  T  L  G  *  L  F  G  S  S  R  *  S  L  F  T  K  *  G  F  A  A  *  N  L  G  V  W  T  E  R  P  L  A  L  *  L  *  F  R  K  A  F  E  I  H  L  C  R  C  W  P  G  S  L  T  I  S  F  L  L  R  P  I  I  S  L  L  V  K  I  L  S  T  D  I  T  C  Y  L  V  S  *  R  E  F  L  K  I  I  *  I  M  Q  D  Q  Y  E  E  V  D  I  I  T  K  G  G  N  Y  G  W  S  M  Y </second_frame>
            <third_frame>   Y  V  F   : D  F  *  I  L  Q  L  D  I  *  N  G  L  K  C  C  V  Q  K  C  M  K  S  L  K  L  K  N  C  I  K  T  K  K  K  V  N  Q  K  K  L  K  L  K  I  I  L  *  A  A  M  P  I  P  F  C  C  C  R  V  K  C  *  W  D  C  T  K  S  I  I  G  W  F  F  T  H  L  C  T  *  T  A  N  L  C  W  S  G  S  F  E  L  I  P  A  L  I  P  C  *  I  T  L  P  P  P  F  Q  K  V  S  L  Q  A  P  Y  V  A  D  L  G  H  W  G  N  Y  S  V  P  R  D  N  P  Y  S  Q  N  K  D  L  Q  P  E  I  W  A  F  G  L  R  D  P  W  R  C  S  F  D  S  E  R  P  S  K  F  I  C  A  D  V  G  Q  V  H  *  Q  S  H  F  C  *  D  L  L  Y  L  C  W  L  R  S  C  Q  Q  T  *  H  A  T  W  Y  L  D  V  S  F  *  K  S  F  E  S  C  R  I  S  M  K  K  L  T  S  S  Q  K  E  E  T  M  D  G  A  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90910" stop="91134"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>222</number_coding_nucleotides>
                  <number_encoded_amino_acids>74</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>ITLPPPFQKVSLQAPYVADLGHWGNYSVPRDNPYSQNKDLQPEIWAFGLRDPWRCSFDSERPSKFICADVGQVH*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="+"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90789" stop="90983"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VLMGLHQIHHWLVFHSFVYLNSQSLLVWFLRAYTSSDTMLNYVTTSISKGFIASTICCRPWTLG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="-" PGL_start="92370" PGL_stop="91320"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="92370" e_stop="92205"/>
            <exon e_start="91955" e_stop="91558"/>
            <exon e_start="91459" e_stop="91320"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.922" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.994" acc_prob="0.999" e_score="0.992"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="92370" e_stop="92205" e_length="166"/>
          </exon>
          <intron i_serial="1" don_prob="0.922" acc_prob="0.997">
            <gDNA_intron_boundary i_start="92204" i_stop="91956" i_length="249"/>
          </intron>
          <exon e_serial="2" e_score="0.992">
            <gDNA_exon_boundary e_start="91955" e_stop="91558" e_length="398"/>
          </exon>
          <intron i_serial="2" don_prob="0.994" acc_prob="0.999">
            <gDNA_intron_boundary i_start="91557" i_stop="91460" i_length="98"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="91459" e_stop="91320" e_length="140"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="92370" stop="92205"/>
              <exon start="91955" stop="91558"/>
              <exon start="91459" stop="91320"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U332681" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCAGTTTCAGGAGAAGATAAATTGTTGATCGTGCAATCAATTTAACTTTAAATTTAAGTCAAAAGCAGTAGTAATCAAGTATCTATTCTGATCAAGTTTGTTTTTCAATCACCTATCAACTGAAGCTAAGTTAATTCTTTGGTGGGGAAATTGATGTTGCTTTGAG : TGCAATGGCTACAGGATGAAGCTAGTCAAAAGCAGCAGACAGTAAAGAACAAGGACCGAGCAGAGATCTGCTTTAGCAACGTGACCATCTGAAGGTGCAGAGGGACCTGGGCTCTCAGCAGTCCTTGCTATCTCCATCGGGCAAGTGTAGTTGCAGCGACTTGGACGAACCACTCTGTATACACCGGTGCTTGTTAAAACAAAGGTATCCTTCCTGTTATCCTGTCCAAACGAGAATATGCAACCTAAAGCAGGCAATGGACTATTGGGAACTGAGCTGCAATTGAGAGGGGAATCATGAGCACAACTGAAAGAAATGCCTCTTGCTGTAAAGTTCCCACTGTTATACGGATTTTCTTGAGCTGCCCAAAAGTTCTTAGCATACAAATCTCCATAGAG : GGATCAGTCTTGGAGCGATAAACATAGCCACCTGATATGGCTGCACATCCAACTTCTTTATTTATATCAGAATGGCGGTATCCTAACACTGGGAATATGGGATCCTCGAAATCACCAGCTGAAGCATTTTTCAAGCGTGA</gDNA_template>
            <first_frame> S  V  S  G  E  D  K  L  L  I  V  Q  S  I  *  L  *  I  *  V  K  S  S  S  N  Q  V  S  I  L  I  K  F  V  F  Q  S  P  I  N  *  S  *  V  N  S  L  V  G  K  L  M  L  L  *   : V  Q  W  L  Q  D  E  A  S  Q  K  Q  Q  T  V  K  N  K  D  R  A  E  I  C  F  S  N  V  T  I  *  R  C  R  G  T  W  A  L  S  S  P  C  Y  L  H  R  A  S  V  V  A  A  T  W  T  N  H  S  V  Y  T  G  A  C  *  N  K  G  I  L  P  V  I  L  S  K  R  E  Y  A  T  *  S  R  Q  W  T  I  G  N  *  A  A  I  E  R  G  I  M  S  T  T  E  R  N  A  S  C  C  K  V  P  T  V  I  R  I  F  L  S  C  P  K  V  L  S  I  Q  I  S  I  E  :  G  S  V  L  E  R  *  T  *  P  P  D  M  A  A  H  P  T  S  L  F  I  S  E  W  R  Y  P  N  T  G  N  M  G  S  S  K  S  P  A  E  A  F  F  K  R   </first_frame>
            <second_frame>  Q  F  Q  E  K  I  N  C  *  S  C  N  Q  F  N  F  K  F  K  S  K  A  V  V  I  K  Y  L  F  *  S  S  L  F  F  N  H  L  S  T  E  A  K  L  I  L  W  W  G  N  *  C  C  F  E  :  C  N  G  Y  R  M  K  L  V  K  S  S  R  Q  *  R  T  R  T  E  Q  R  S  A  L  A  T  *  P  S  E  G  A  E  G  P  G  L  S  A  V  L  A  I  S  I  G  Q  V  *  L  Q  R  L  G  R  T  T  L  Y  T  P  V  L  V  K  T  K  V  S  F  L  L  S  C  P  N  E  N  M  Q  P  K  A  G  N  G  L  L  G  T  E  L  Q  L  R  G  E  S  *  A  Q  L  K  E  M  P  L  A  V  K  F  P  L  L  Y  G  F  S  *  A  A  Q  K  F  L  A  Y  K  S  P  *  R :   D  Q  S  W  S  D  K  H  S  H  L  I  W  L  H  I  Q  L  L  Y  L  Y  Q  N  G  G  I  L  T  L  G  I  W  D  P  R  N  H  Q  L  K  H  F  S  S  V  </second_frame>
            <third_frame>   S  F  R  R  R  *  I  V  D  R  A  I  N  L  T  L  N  L  S  Q  K  Q  *  *  S  S  I  Y  S  D  Q  V  C  F  S  I  T  Y  Q  L  K  L  S  *  F  F  G  G  E  I  D  V  A  L  S :   A  M  A  T  G  *  S  *  S  K  A  A  D  S  K  E  Q  G  P  S  R  D  L  L  *  Q  R  D  H  L  K  V  Q  R  D  L  G  S  Q  Q  S  L  L  S  P  S  G  K  C  S  C  S  D  L  D  E  P  L  C  I  H  R  C  L  L  K  Q  R  Y  P  S  C  Y  P  V  Q  T  R  I  C  N  L  K  Q  A  M  D  Y  W  E  L  S  C  N  *  E  G  N  H  E  H  N  *  K  K  C  L  L  L  *  S  S  H  C  Y  T  D  F  L  E  L  P  K  S  S  *  H  T  N  L  H  R   : G  I  S  L  G  A  I  N  I  A  T  *  Y  G  C  T  S  N  F  F  I  Y  I  R  M  A  V  S  *  H  W  E  Y  G  I  L  E  I  T  S  *  S  I  F  Q  A  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="91879" stop="91670"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QRDHLKVQRDLGSQQSLLSPSGKCSCSDLDEPLCIHRCLLKQRYPSCYPVQTRICNLKQAMDYWELSCN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="93601" PGL_stop="92612"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="93601" e_stop="93194"/>
            <exon e_start="93008" e_stop="92936"/>
            <exon e_start="92635" e_stop="92612"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.805" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.971" acc_prob="0.671" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="93601" e_stop="93194" e_length="408"/>
          </exon>
          <intron i_serial="1" don_prob="0.805" acc_prob="0.982">
            <gDNA_intron_boundary i_start="93193" i_stop="93009" i_length="185"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="93008" e_stop="92936" e_length="73"/>
          </exon>
          <intron i_serial="2" don_prob="0.971" acc_prob="0.671">
            <gDNA_intron_boundary i_start="92935" i_stop="92636" i_length="300"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="92635" e_stop="92612" e_length="24"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="93601" stop="93194"/>
              <exon start="93008" stop="92936"/>
              <exon start="92635" stop="92612"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U343795" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAGAGGCTTGGTTTTTGCACAAGGAAATGATCAAAAAGGGATTCACTCCGACATTAGAGACTTATCATGCACTCATCAAAGGGTTTTTAAAGAGGAAAAAGTATTCTGAGGCGAAAGAATTGTTTGAAGAGATGAGAAGATATGGTTTATTGGCAGATAAAGAATTTTACTCTATCTTTGCGGATATGAACTATGAACAAGGGAACTTTGATTTGGCGCTTGAGCTTTGTGATGAAGCAGTAGAAAAATGTCTTACAGACAAGACTGATAACAGGAATGCATGATGGTTGTCTGACATGATTCTGCATCCTGTAGCTATTTTTGGAACCAGTGACAAAAAACTAGTTGTCTTGCTCCCAATGATGCTAATCTTTTTCGTGCTGAAGTCAGTTCAAGTTGTGTTACTCT : GGAGGTGAAGGGAGGACCAATGAATCACCTTTAAAACAATCCCGCTTGGATCAGAAAGAAGCATGCAAGCTAG : GTGTCGTGGACTTGGAGTTCTACT</gDNA_template>
            <first_frame> K  R  L  G  F  C  T  R  K  *  S  K  R  D  S  L  R  H  *  R  L  I  M  H  S  S  K  G  F  *  R  G  K  S  I  L  R  R  K  N  C  L  K  R  *  E  D  M  V  Y  W  Q  I  K  N  F  T  L  S  L  R  I  *  T  M  N  K  G  T  L  I  W  R  L  S  F  V  M  K  Q  *  K  N  V  L  Q  T  R  L  I  T  G  M  H  D  G  C  L  T  *  F  C  I  L  *  L  F  L  E  P  V  T  K  N  *  L  S  C  S  Q  *  C  *  S  F  S  C  *  S  Q  F  K  L  C  Y  S  :  G  G  E  G  R  T  N  E  S  P  L  K  Q  S  R  L  D  Q  K  E  A  C  K  L   : G  V  V  D  L  E  F  Y  </first_frame>
            <second_frame>  R  G  L  V  F  A  Q  G  N  D  Q  K  G  I  H  S  D  I  R  D  L  S  C  T  H  Q  R  V  F  K  E  E  K  V  F  *  G  E  R  I  V  *  R  D  E  K  I  W  F  I  G  R  *  R  I  L  L  Y  L  C  G  Y  E  L  *  T  R  E  L  *  F  G  A  *  A  L  *  *  S  S  R  K  M  S  Y  R  Q  D  *  *  Q  E  C  M  M  V  V  *  H  D  S  A  S  C  S  Y  F  W  N  Q  *  Q  K  T  S  C  L  A  P  N  D  A  N  L  F  R  A  E  V  S  S  S  C  V  T  L :   E  V  K  G  G  P  M  N  H  L  *  N  N  P  A  W  I  R  K  K  H  A  S  *  :  V  S  W  T  W  S  S  T </second_frame>
            <third_frame>   E  A  W  F  L  H  K  E  M  I  K  K  G  F  T  P  T  L  E  T  Y  H  A  L  I  K  G  F  L  K  R  K  K  Y  S  E  A  K  E  L  F  E  E  M  R  R  Y  G  L  L  A  D  K  E  F  Y  S  I  F  A  D  M  N  Y  E  Q  G  N  F  D  L  A  L  E  L  C  D  E  A  V  E  K  C  L  T  D  K  T  D  N  R  N  A  *  W  L  S  D  M  I  L  H  P  V  A  I  F  G  T  S  D  K  K  L  V  V  L  L  P  M  M  L  I  F  F  V  L  K  S  V  Q  V  V  L  L   : W  R  *  R  E  D  Q  *  I  T  F  K  T  I  P  L  G  S  E  R  S  M  Q  A  R :   C  R  G  L  G  V  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="93599" stop="93318"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EAWFLHKEMIKKGFTPTLETYHALIKGFLKRKKYSEAKELFEEMRRYGLLADKEFYSIFADMNYEQGNFDLALELCDEAVEKCLTDKTDNRNA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="105601" PGL_stop="104909"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="105601" e_stop="105590"/>
            <exon e_start="105457" e_stop="104909"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.907" e_score="1.000"/>
          <exon-only e_score="0.982"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="105601" e_stop="105590" e_length="12"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.907">
            <gDNA_intron_boundary i_start="105589" i_stop="105458" i_length="132"/>
          </intron>
          <exon e_serial="2" e_score="0.982">
            <gDNA_exon_boundary e_start="105457" e_stop="104909" e_length="549"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="105601" stop="105590"/>
              <exon start="105457" stop="104909"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329214" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATAAGCTAAGG : TTGTTTAAGATGGAGGACGTGAGCATGGGAATGTGGGTAGAACAATTCAACAGTTCCAGGCCCGTAGAGTATGTGCATAGCTTGAAGTTCTGTCAGTTTGGGTGCATTGATGATTATTACACTGCACATTATCAATCTCCAAGGCAAATGATCTGCCTGTGGAGAAAGTTGCTGAACCAAGGGAAACCTCAGTGCTGTAATGTGAGATGACAAGGCATACCCTGTCAGCTAGTGTTAGGCAACTCTGAAAAGGAAACGAGACAAGATAGATGCCAAGGCGCGCATACCCTGTTAGCTAGTGTTAGGCAACACGGAAAAGGAAGCGAGACAAGATAAGTTCCTGGGAAGAGCTTGTACATATTGCTCGAGTAAATTAGCCTATCGTGCTATAATTATATTTACTTCATTCATTCTTTTGTTGGGGCGTCAGTCTTGTACCCCAGGCTAGTTGACACGTCAGTCTCGTTAAACTGTATGAAAACAATGACAGCTTAAGCTCTTATATATGAAATTCAAGGGTGAATGGCTCATTTTCAATCTCATTTTGCA</gDNA_template>
            <first_frame> H  K  L  R  :  L  F  K  M  E  D  V  S  M  G  M  W  V  E  Q  F  N  S  S  R  P  V  E  Y  V  H  S  L  K  F  C  Q  F  G  C  I  D  D  Y  Y  T  A  H  Y  Q  S  P  R  Q  M  I  C  L  W  R  K  L  L  N  Q  G  K  P  Q  C  C  N  V  R  *  Q  G  I  P  C  Q  L  V  L  G  N  S  E  K  E  T  R  Q  D  R  C  Q  G  A  H  T  L  L  A  S  V  R  Q  H  G  K  G  S  E  T  R  *  V  P  G  K  S  L  Y  I  L  L  E  *  I  S  L  S  C  Y  N  Y  I  Y  F  I  H  S  F  V  G  A  S  V  L  Y  P  R  L  V  D  T  S  V  S  L  N  C  M  K  T  M  T  A  *  A  L  I  Y  E  I  Q  G  *  M  A  H  F  Q  S  H  F  A </first_frame>
            <second_frame>  I  S  *  G :   C  L  R  W  R  T  *  A  W  E  C  G  *  N  N  S  T  V  P  G  P  *  S  M  C  I  A  *  S  S  V  S  L  G  A  L  M  I  I  T  L  H  I  I  N  L  Q  G  K  *  S  A  C  G  E  S  C  *  T  K  G  N  L  S  A  V  M  *  D  D  K  A  Y  P  V  S  *  C  *  A  T  L  K  R  K  R  D  K  I  D  A  K  A  R  I  P  C  *  L  V  L  G  N  T  E  K  E  A  R  Q  D  K  F  L  G  R  A  C  T  Y  C  S  S  K  L  A  Y  R  A  I  I  I  F  T  S  F  I  L  L  L  G  R  Q  S  C  T  P  G  *  L  T  R  Q  S  R  *  T  V  *  K  Q  *  Q  L  K  L  L  Y  M  K  F  K  G  E  W  L  I  F  N  L  I  L   </second_frame>
            <third_frame>   *  A  K   : V  V  *  D  G  G  R  E  H  G  N  V  G  R  T  I  Q  Q  F  Q  A  R  R  V  C  A  *  L  E  V  L  S  V  W  V  H  *  *  L  L  H  C  T  L  S  I  S  K  A  N  D  L  P  V  E  K  V  A  E  P  R  E  T  S  V  L  *  C  E  M  T  R  H  T  L  S  A  S  V  R  Q  L  *  K  G  N  E  T  R  *  M  P  R  R  A  Y  P  V  S  *  C  *  A  T  R  K  R  K  R  D  K  I  S  S  W  E  E  L  V  H  I  A  R  V  N  *  P  I  V  L  *  L  Y  L  L  H  S  F  F  C  W  G  V  S  L  V  P  Q  A  S  *  H  V  S  L  V  K  L  Y  E  N  N  D  S  L  S  S  Y  I  *  N  S  R  V  N  G  S  F  S  I  S  F  C  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLm0037H06.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105601" stop="105590"/>
                    <exon start="105457" stop="105248"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HKLRLFKMEDVSMGMWVEQFNSSRPVEYVHSLKFCQFGCIDDYYTAHYQSPRQMICLWRKLLNQGKPQCCNVR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 20 chains have been computed
$ 
$ memory statistics:
$ 96552 bytes spliced alignments in total
$ 17 spliced alignments have been stored
$ 5679 bytes was the average size of a spliced alignment
$ 24216 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1513 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 22 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-14 20:48:35
-->
