<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 05:43:52"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C05SLe0086I08-S3f3r/GenomeThreader_SGN_markers/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C05SLe0086I08-S3f3r/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLe0086I08-S3f3r/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M6692-2" ref_strand="+" ref_description="SGN-M6692-2 C2_At1g23740-2 [cosii_markers]">
      <seq>gttgaggaaaatactgactgagaggtaaaaaaacagttggaaagaaagaagaacaatggaagctctgttatcttccactactcttcaactcaaaccccttcatccaccctcttctttctcttctcttcactctccattttcttctacttctgttcttagagtaaagggtagcagaaaagctgaaacttttattcaaagaagccaattttccactgttttgcctcttagagtctctgctagttctcaagctgcagctgctgaaacatccacaagcatttctattccttctgaaatgaaagcttggagttatactgattatggaagtgttgatgttttgaagttggagtccaatgttgcagttcctgacattaaggaagatcaagtcttgattaaggttgttgctgctgctcttaaccctattgattttaaacgaaggctcggaaaatttaaggccactgattctccacttccaactgtgccaggttatgatgttgctggtgtggtagtgaaagttggtagtcaagtaaaggagttaaaagaaggagatgaagtgtatggagatataaatgagaaagcaatagatggaccaaatcaatttggatctttagctgagtacactgctgttgaagagaaactagttgctttgaaacccaagaatctgagttttgcggaggctgctgctcttcctctagttattgaaactgcttatgaaggtcttgagaaagctggattttctgctggccaatccattcttgttttgggaggtgctggtggtgttggatcccttgtaatccagcttgctaaacatgtatttagtgcttcaaaagtagcagctacctccagcacagggaagttggaactcctgaaaagcttaggagctgatttagctattgactacactaaggagaattttgaagatctgcctgacaagtttgatgttgtttatgattctgttggtcagggtgaaaaggcggtgaaggcagtgaaggaaggtgggagtgtggtagtgctaacaggggcagtaactccaccaggttttagatttgtggtgacatcaaatggagaaatgttgaagaaactgaacccatacttggagagtgggaaggtgaaaccagtgatagatccaaagggaccattcccatttgataaggttgtggatgctttctctcatcttgaaactgggagagccanctggaaagttgtcatttatcccattccttaaaaggtaactctcattttgtgcaatttttaatatattttagggaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLe0086I08-S3f3r/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C05SLe0086I08.1" temp_strand="-" temp_description="C05SLe0086I08.1  AC204082.1 htgs_phase:3 submitted_to_sgn_as:C05SLe0086I08, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="24503" stop="20818"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24204" g_stop="23732" g_length="473"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="472" r_length="472" r_score="0.970"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23731" i_stop="22913" i_length="819">
            <donor d_prob="0.997" d_score="0.98"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="22912" g_stop="22589" g_length="324"/>
          <reference_exon_boundary r_type="cDNA" r_start="473" r_stop="796" r_length="324" r_score="0.951"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="22588" i_stop="22077" i_length="512">
            <donor d_prob="1.000" d_score="0.96"/>
            <acceptor a_prob="0.996" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22076" g_stop="21917" g_length="160"/>
          <reference_exon_boundary r_type="cDNA" r_start="797" r_stop="956" r_length="160" r_score="0.975"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="21916" i_stop="21428" i_length="489">
            <donor d_prob="0.949" d_score="0.98"/>
            <acceptor a_prob="0.970" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="21427" g_stop="21118" g_length="310"/>
          <reference_exon_boundary r_type="cDNA" r_start="957" r_stop="1267" r_length="311" r_score="0.935"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLe0086I08.1" gen_strand="-" ref_id="SGN-M6692-2" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>1267</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLe0086I08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M6692-2" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24204" e_stop="23732"/>
          <exon e_start="22912" e_stop="22589"/>
          <exon e_start="22076" e_stop="21917"/>
          <exon e_start="21427" e_stop="21118"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGAGGAAAATACTGAGTGAGGGGTAAAAAAACCAGCTGGAAAGAAAGAAGAACAATGGAAGCTCTGTTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCTTTCTCTTCTCTTCACTCTCCATTTTCTTCTATTTCTGTTCTTAGAGTAAAGGGTAGCAAAAAAGCTGAAACTTTTATTCAAAGAAGCAATTTTTCCACTGTTTTGCCACTTAGAGTCTCTGCTAGTTCTCAAGCAGCAGCTGCTGAAACATCCACAAGCATTTCTATTCCTTCTGAAATGAAAGCTTGGAGTTATACTGATTATGGAAGTGTTGATGTTTTGAAGTTGGAGTCCAATGTTGCAGTTCCTGACATTAAGGAAGATCAAGTCTTGATTAAGATTGTTGCTGCTGCTCTTAACCCTGTTGATTTTAAACGACGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCAGTAAGTTTAGGCACCCTTTTCTTGTTATCTTTGAGTTAGGCTTGAATTCCATTTTTGAATTGTAAATTTGCATTTCTTATCACTTGTGTTATAGTGTTAGTGCAGCTTTTCTCCTTGGATTTCAGCACAGAGGACGTTCAACTATTTTTCGTGTTTATTTCAGTTAATGACTACAGTGGTCACTACTAGTGTTTAGATTTCTGTGACCCTCATCGATGGCCAATATTAAATTAGAGACTATCTGTACTATCTTGTGTTTATGTGTGACGTTTCTTCTAAAAGTTTATGTTGTTAGAGGGAACACACATTCATTTACTTAATTCTTTATTGGAACATGCCCCTCGTGTGGGGGTTCGATTCATTTCATGAGTCAAGCACGTGGATATTATTTATGATAATGGGTGGCAATGAGAACCGAACTCAGGACTTGTGCTTGTTGTGATACCATGTTGAAGTGTATGACATCTAATCTAAAAGCTTAAGTTGTTAGAAACAACATATAGTTATTTACTTAATTATATGTATCTCAACATTCTGCAATTGTTGAAGATGTAAATGGTTGAATAAAATTATGATTTTTCTAACATTTTGAGTTTTTAGATGAGATAACCACACAATTTTAACATGTTGACATAGAATTTCCATGTGTGTTTGGACCATGGAAAAGAATCAGCCTCACAAGTTTGGGGCCTCGTTGAAGTTATAATTAAGTAAATAAAAGTGTACCTTCTGTGACAATACAAGTTAACAGGAAATAGGAGAAAATCACATAATATTTCTGTATATGTGGACTAAAACATATATTTTCTTTCTGTGTAGACTGTGCCAGGTTATGATGTTGCTGGTGTGGTAGTGAAAGTTGGTAGTCAGGTAAAGGGATTAAAAGAAGGGGATGAAGTATATGGAGATATACATGAGAAAGCATTAGATGGACCAAAGCAATTTGGATCCTTAGCTGAGTACACTGCTGTTGAAGAGAAACTAGTTGCTTTGAAACCCAAGAATCTTAGTTTTGCGGAGGCTGCTGCTCTTCCTCTAGCTATTGAGACTGCTTATGAAGGTCTTGAGAAAGCTGGATTTTCTTCTGGCAAATCCATTCTTGTTTTGGGAGGTGCTGGCGGTGTTGGATCCCTAGTAATCCAGGTATGAACATTTCAATAAGTCTCATTTAAAGGTATTCTTTCAGTTTTAGAAAAGCATGATTTCTAGAGAAGTGTTCAGGTCACCTAATGATAACTATGAGTAACCGTCCATAAGAGTGAGATTAGTAACTCAAAAGATAAGGCAGGTTGTCCGCTACAACAGATTAAATATTCTGGTGCTAGCGTCTACAAAGATAACATACGGACATGGCTTTCAGTAGGAATATTTGAGGACAATGTCAAATTAAATCATTTTTTCAGTCTTCATCATTTACTCCCCTGAATTAGCAGTCACGCGTCTTCTTCACCTCGCTCATTACATCATATGGATTCAATATCCATTGGGCGTTTTTAAAGATAAACATAATAGCCTCTTACCCTATTTTTGTGTAAACGATCTCGTAGGCTGGGTAGCTTTAGCTATCTTTTCTGCATGTTCAATCCTTTTATATTTTCATGTGCCCCTGCTGCTAAAAATAGAAGCTGATGTGTCGTGTTTTTTCTGTTATGCAGCTTGCTAAACATGTATTTGGTGCTTCTAAAGTAGCAGCTACCTCTAGCACAGGGAAGTTGGAACTCCTGAAAAGCTTAGGAGCTGATTTAGCTATTGACTACACTAAGGAGAATTTTGAAGATCTGCCTGACAAGTTTGATGTTGTTTATGATTCAGTTGGTAAGAAATTAGTTTCAACTTTGAAAATTTCCGTTCTTGTAAACGCATTGTCAGGCACGTACAAATTTAACATAACACATAGGTAACTAAATAGTTTAACAGTTAATAATAGTGAACATTCACGAGTATAAAGATTAAAACTGCATATTTTGAATCAATTGATGATCAAAAACTACAATTGCAAAATTTCCTTGATAAATTCTGAACTCATCATTTCATAAGTACAATGTTGGGATCTTTACATAAATAGCCCGCCCAATTCATTATGTACTTTCTCTAGCCGGTCTACATAAATTATGTACTGATTATAAATGGTTATATACAGATTATACATCTGACGGTTATCTTTAGTTTAAGCTGTTGAGAGGGCTGCTATTTAGGTTAATTCTTCTACAATGTTTTCAGCGCTAAGAATCTTCCATCGATTTTAATTAGATTTTGGATCTGCTTCTACTAACAACTATCTCCTCCTCTTGGTACTGACTACAGGTCAGGGTGAAAAGGCGGTGAAGGTAGTGAAGGAAGGTGGGAGTGTGGTAGTGCTAACAGGGGCAGTAACTCCACCAGGTTTTAGATTTGTGGTGACATCAAATGGAGAGATGTTGAAGAAACTGAACCCATACTTGGAAAGTGGGAAGGTGAAACCAGTGATAGATCCAAAGGGACCATTCTCATTTGATAAGGTTGTGGATGCTTTCTCTTATCTTGAAACTGGAAGAGCCACTGGGAAAGTTGTTATTCATCCCATTCCTTGAAAGTTAGCTCTTATTTTGTACAATTTCTAATACA-TTTAGGGAAA</genome_strand>
        <mrna_strand>GTTGAGGAAAATACTGACTGAGAGGTAAAAAAA-CAGTTGGAAAGAAAGAAGAACAATGGAAGCTCTGTTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCTTTCTCTTCTCTTCACTCTCCATTTTCTTCTACTTCTGTTCTTAGAGTAAAGGGTAGCAGAAAAGCTGAAACTTTTATTCAAAGAAGCCAATTTTCCACTGTTTTGCCTCTTAGAGTCTCTGCTAGTTCTCAAGCTGCAGCTGCTGAAACATCCACAAGCATTTCTATTCCTTCTGAAATGAAAGCTTGGAGTTATACTGATTATGGAAGTGTTGATGTTTTGAAGTTGGAGTCCAATGTTGCAGTTCCTGACATTAAGGAAGATCAAGTCTTGATTAAGGTTGTTGCTGCTGCTCTTAACCCTATTGATTTTAAACGAAGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGCCAGGTTATGATGTTGCTGGTGTGGTAGTGAAAGTTGGTAGTCAAGTAAAGGAGTTAAAAGAAGGAGATGAAGTGTATGGAGATATAAATGAGAAAGCAATAGATGGACCAAATCAATTTGGATCTTTAGCTGAGTACACTGCTGTTGAAGAGAAACTAGTTGCTTTGAAACCCAAGAATCTGAGTTTTGCGGAGGCTGCTGCTCTTCCTCTAGTTATTGAAACTGCTTATGAAGGTCTTGAGAAAGCTGGATTTTCTGCTGGCCAATCCATTCTTGTTTTGGGAGGTGCTGGTGGTGTTGGATCCCTTGTAATCCAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CTTGCTAAACATGTATTTAGTGCTTCAAAAGTAGCAGCTACCTCCAGCACAGGGAAGTTGGAACTCCTGAAAAGCTTAGGAGCTGATTTAGCTATTGACTACACTAAGGAGAATTTTGAAGATCTGCCTGACAAGTTTGATGTTGTTTATGATTCTGTTG.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCAGGGTGAAAAGGCGGTGAAGGCAGTGAAGGAAGGTGGGAGTGTGGTAGTGCTAACAGGGGCAGTAACTCCACCAGGTTTTAGATTTGTGGTGACATCAAATGGAGAAATGTTGAAGAAACTGAACCCATACTTGGAGAGTGGGAAGGTGAAACCAGTGATAGATCCAAAGGGACCATTCCCATTTGATAAGGTTGTGGATGCTTTCTCTCATCTTGAAACTGGGAGAGCCANCTGGAAAGTTGTCATTTATCCCATTCCTTAAAAGGTAACTCTCATTTTGTGCAATTTTTAATATATTTTAGGGAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLe0086I08-S3f3r/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M2004" ref_strand="+" ref_description="SGN-M2004 T1440 [cos_markers]">
      <seq>ttctttatcatgcacataaatggtttgaggaaaatactgagtgagaggttaaaaaaacagctggaaagaaagaagaacaatgaaagctctattatcttccactactcttcaactcaaaccccttcatccaccctcttctttctcttctcttcactctccattttcttctatttctgttcttagagtaaagggtagcaaaaaagctgaaacttttattcaaagaagcaaattttccactgttttgccacttaaagtctcttaaccctgttgattttaaacgacggctcggaaaatttaaggccactgattctccacttccaactgtgccaggttatgatgttgctggtgtggtagtgaaagttggtagtcaggttaagggattaaaagaaggggatgaagtatatggagatatacatgagaaagcattagatggaccaaagcaatttggatccttagctgagtacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLe0086I08-S3f3r/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C05SLe0086I08.1" temp_strand="-" temp_description="C05SLe0086I08.1  AC204082.1 htgs_phase:3 submitted_to_sgn_as:C05SLe0086I08, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="24527" stop="22466"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="24227" g_stop="23969" g_length="259"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="259" r_length="259" r_score="0.961"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="23968" i_stop="23793" i_length="176">
            <donor d_prob="0.000" d_score="0.96"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="23792" g_stop="23732" g_length="61"/>
          <reference_exon_boundary r_type="cDNA" r_start="260" r_stop="320" r_length="61" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="23731" i_stop="22913" i_length="819">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="22912" g_stop="22766" g_length="147"/>
          <reference_exon_boundary r_type="cDNA" r_start="321" r_stop="467" r_length="147" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLe0086I08.1" gen_strand="-" ref_id="SGN-M2004" ref_strand="+">
        <total_alignment_score>0.976</total_alignment_score>
        <cumulative_length_of_scored_exons>467</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLe0086I08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M2004" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="24227" e_stop="23969"/>
          <exon e_start="23792" e_stop="23732"/>
          <exon e_start="22912" e_stop="22766"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATCTATCATGCACATAAATTGTTTGAGGAAAATACTGAGTGAGGGGTAAAAAAACCAGCTGGAAAGAAAGAAGAACAATGGAAGCTCTGTTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCTTTCTCTTCTCTTCACTCTCCATTTTCTTCTATTTCTGTTCTTAGAGTAAAGGGTAGCAAAAAAGCTGAAACTTTTATTCAAAGAAGCAATTTTTCCACTGTTTTGCCACTTAGAGTCTCTGCTAGTTCTCAAGCAGCAGCTGCTGAAACATCCACAAGCATTTCTATTCCTTCTGAAATGAAAGCTTGGAGTTATACTGATTATGGAAGTGTTGATGTTTTGAAGTTGGAGTCCAATGTTGCAGTTCCTGACATTAAGGAAGATCAAGTCTTGATTAAGATTGTTGCTGCTGCTCTTAACCCTGTTGATTTTAAACGACGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCAGTAAGTTTAGGCACCCTTTTCTTGTTATCTTTGAGTTAGGCTTGAATTCCATTTTTGAATTGTAAATTTGCATTTCTTATCACTTGTGTTATAGTGTTAGTGCAGCTTTTCTCCTTGGATTTCAGCACAGAGGACGTTCAACTATTTTTCGTGTTTATTTCAGTTAATGACTACAGTGGTCACTACTAGTGTTTAGATTTCTGTGACCCTCATCGATGGCCAATATTAAATTAGAGACTATCTGTACTATCTTGTGTTTATGTGTGACGTTTCTTCTAAAAGTTTATGTTGTTAGAGGGAACACACATTCATTTACTTAATTCTTTATTGGAACATGCCCCTCGTGTGGGGGTTCGATTCATTTCATGAGTCAAGCACGTGGATATTATTTATGATAATGGGTGGCAATGAGAACCGAACTCAGGACTTGTGCTTGTTGTGATACCATGTTGAAGTGTATGACATCTAATCTAAAAGCTTAAGTTGTTAGAAACAACATATAGTTATTTACTTAATTATATGTATCTCAACATTCTGCAATTGTTGAAGATGTAAATGGTTGAATAAAATTATGATTTTTCTAACATTTTGAGTTTTTAGATGAGATAACCACACAATTTTAACATGTTGACATAGAATTTCCATGTGTGTTTGGACCATGGAAAAGAATCAGCCTCACAAGTTTGGGGCCTCGTTGAAGTTATAATTAAGTAAATAAAAGTGTACCTTCTGTGACAATACAAGTTAACAGGAAATAGGAGAAAATCACATAATATTTCTGTATATGTGGACTAAAACATATATTTTCTTTCTGTGTAGACTGTGCCAGGTTATGATGTTGCTGGTGTGGTAGTGAAAGTTGGTAGTCAGGTAAAGGGATTAAAAGAAGGGGATGAAGTATATGGAGATATACATGAGAAAGCATTAGATGGACCAAAGCAATTTGGATCCTTAGCTGAGTACACT</genome_strand>
        <mrna_strand>TTCTTTATCATGCACATAAATGGTTTGAGGAAAATACTGAGTGAGAGGTTAAAAAAACAGCTGGAAAGAAAGAAGAACAATGAAAGCTCTATTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCTTTCTCTTCTCTTCACTCTCCATTTTCTTCTATTTCTGTTCTTAGAGTAAAGGGTAGCAAAAAAGCTGAAACTTTTATTCAAAGAAGCAAATTTTCCACTGTTTTGCCACTTAAAGTCTCT................................................................................................................................................................................TAACCCTGTTGATTTTAAACGACGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCA...................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTGTGCCAGGTTATGATGTTGCTGGTGTGGTAGTGAAAGTTGGTAGTCAGGTTAAGGGATTAAAAGAAGGGGATGAAGTATATGGAGATATACATGAGAAAGCATTAGATGGACCAAAGCAATTTGGATCCTTAGCTGAGTACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05SLe0086I08-S3f3r/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_markers" ref_id="SGN-M1867" ref_strand="+" ref_description="SGN-M1867 T1252 [cos_markers]">
      <seq>cagatcgtgactttcttattcgcaacaatggtgacaaggttaagcttgatactttaaaggagaaaaaaattggtttgtacttttcagcatcatggtgtggtccgtgcaaacatttcaccccaaatttggtagaggcgtacaatgctctcctaccaaaaggagactttgaagttgttttccttactactgatatggatgatgaatcttttaaggagtacttttctaaaatgccttggctcgctgtcccattctctgattctgaaacacgtaaacgtttgaatgaattgtttgctggtaggggaataccccacttagtgatcctt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05SLe0086I08-S3f3r/GenomeThreader_SGN_markers/un_xed_seqs" temp_id="C05SLe0086I08.1" temp_strand="-" temp_description="C05SLe0086I08.1  AC204082.1 htgs_phase:3 submitted_to_sgn_as:C05SLe0086I08, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="38223" stop="30843"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37923" g_stop="37886" g_length="38"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="38" r_length="38" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="37885" i_stop="31428" i_length="6458">
            <donor d_prob="1.000" d_score="0.00"/>
            <acceptor a_prob="0.857" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="31427" g_stop="31143" g_length="285"/>
          <reference_exon_boundary r_type="cDNA" r_start="39" r_stop="323" r_length="285" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05SLe0086I08.1" gen_strand="-" ref_id="SGN-M1867" ref_strand="+">
        <total_alignment_score>0.989</total_alignment_score>
        <cumulative_length_of_scored_exons>323</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05SLe0086I08.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-M1867" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37923" e_stop="37886"/>
          <exon e_start="31427" e_stop="31143"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CAGATCGTGACTTTCTTATTCGCAACAATGGTGACAAGGTATCAATTGTTACATAAATTCTTTGTTTCTCTTATAGTGAAGTAATTTGTAGTACCTGATGTTGATAAATGATAATTTGGAGAATTTCGATGTAGTTTCTTGTTATTCTTTTGGTTTATGTATTCGTATATTGGGGGCGGAGCTAGGTAGAGCACACGATTTAGCACGGAAAATTATACTGTTTAAATATTTTTTTAATTATATATGTTGTGCGGAATTTGAGATAATACGAGAAAATATAAACGCGAAAAACAAGATAACAGATTTACGTGGTTCACCAATAAATTGGCTACGTCCACGGGAAGAGAGGGAGCAGTTTTATTATGGAGAGGCAAAAACAGAATTACAGAATAGGGTTTCCCATAGCGTCTATATATAGTGCTAAGCTACGCCCTAACAGGCTTGGGCCCAACATACAGAATCAACAGAAAACTAAGGGCCCAATACAACAACATTGTATACCGTCGGGCCGGGGGCGTCTCCGCCCCCCCGGACCCCCAGGCCAGGGGGCGCGTCGCCCCCCTGGACCCCCCGACTCGCTGACCGGGCAACAAGACCCCCGTCCTTTCTGTTTGTAGCGGGTCCGATTCAAGGCATTCAACAAATCTCCACTTTGACTTGAATTCTCCGAACAGATTCTTCAGACGCACTATGATAGTGCCAGGCCTCCCCCTCTTCCTCAGAGTTGCCCCGCAGGGCAATTAACAGCTTCTGATGTTGAGCAAGTCCAAACAGTGTTGAAACTTGCTCTGTGGAACCGGCTTTGTGAACATATCAGCAGGATTATCAGCAGTTCCTACTTTCTTCACCTTGATTCTCTTCTCACTTCTCAGAAAATGATACCTTACGTCAATATGCTTGGTTCTCTCATGATGGACTTGATCCTTGGCTAGACAAATTGCGCTCAAACTGTCACAATACACCGTAGCCTGATCATGATGCAGACCAAGATCACTAACCAGCCCTTTCAACCAAATCCCTTCTTTTGCAGCCTCTGTCAAGGCCATGTACTCCGCTTCCGTAGTAGACAAAGTCACTGTAGGTTGCAAAGTTGCCTTCCAACTGACGACAGATCCTCCAAGGGTAAACACATAGCCAGTCATCGATCTTCTTATGTCAACATCTCCAGCATAGTCTGAATCAGAATAGCCAGTAACCAAGCACTGAGTATCACCTCCATAAATGAGACCAACGTCAGATGTACCTCTAAGGTACCGGAAAATTCTCTTCACAGCCTGCCAATGTTCTCTCCCTGGTTGTCCCATGAATCTGCTCACTACACTGACTGCATGTGCTAAATCTGGCCTTGTAAAGACCATAGCATACATCAAACTTCCTACGGCACTGGCATAAGGGACTCGTGACATATACTCCTTCTCTTCTTCTGACTGTGGAGCAAACATGGCAGTGAGATGGATATTGGCAGCACTGGGGGTATCAATGGGCTTAGATGAAGACATGCCAAACCTCGCTAAGACCTTCTGAATGTAGCTTCTCTGTGACAAGAAAAGTTTCCTTCTCTCTCTGTCTCTAATGATCTCCATCCCTAAAATCTTCCGAGCGGCTCCCAGATCCTTCATCTCAAACTCAGCACTAAGTAAACCCTTCAGCTTCTGAATGTCATACTTCTTCTTTGCAGCTATCAACATATCATCTACATAAAGCACCAGATAGATGAATGAATCATCATTGAGCCTATTGTAGTAGACACAACAGTCATATGAGCTCCGAGTATAGCCTAACTTCACCATATAGCTGTCAAACCTTTTATACCACTGCCTTGGAGACTGCTTAAGTCCATATAAGGACTTCTTCAACTTGCAGACGTGATTTTCCTTCCCTGGAACTTGGAAACCATCCGGCTGAGTCATGTATATCTCTTCCTCCAACTCTCCATGTAGAAACGCTGTCTTCACATCAAGTTGTTCAAGCTCCAGATTCTGATGTGCAACTATCGCTAGTAACACTCGGATGGAAGTATGTCTGACCACTGGTGAGAAGATCTCATTGTAGTCCACTCCCTCTCTTTGGTTGAAACCTCTGGCAACAACCCTGGCTTTATACTTGACTCCTTCTGCTGGTGATATCCCTTCCTTCTTCTTGAAAACCCATTTGCAAGTAATAATCTTTCTCCTCGAAGGCTGTATGACCAGATCCCATGTTTGATTCTTGTGTAGGGACTCCATCTCATCTCCCATAGCGGCAAACCATTTTTCAGAATCAGAACTTAAAATGGCTTCTTTGTAAGTAGACGGCTCAGATGTATCTACCTCTTCAGCAACCTGCAGTGCATAACCCACCATGTCCTCAAAACCATACCTCGTAGGTGGCCGAACTCCAACCCTCCTTGGCCGATCTTGAGCTATACTCTGATGGATATCTGATGGCATAGATTCTGGAATATCAGTTTCTGTCTGTGGCTCTTGATCCTCCTCTTCAGGTTCCTTTAAATCGCTCTCGTTCTGAATGACTTGAAACTCCACCTGTTTGTCAAGACTCCCAGTTTCTGACGTAGTTGTAGGCTTCACAATGGTTCTAAGCAGAGAACTTTCATCAAAGACAACGTTCCTGCTCACAATAACCCTCTTTTCTGCTGGAGACCAGATTCTGAAACCTTTCACTCCATCTCCGTAGCCCACAAATACTCCCTTTTTAGCTCTTGGTTCTAACTTACCTTCACTAACGTGATAGTAAGCCGTACAACCAAAAGCTTTCAGATTTGAATAATCAGCAGCTTTTCCTGACCACATCTCCATAGGTGTCTTGCACTGTATGCCTGTATGTGGTCCGCGGTTAATCAAGTAGCAAGCTGTACTAACCGCTTCTGCCCAGAATCTTCTATCTAGCCCAGCATTAGAGAGCATGCACCTTGCTCTCTCTAGAAGTGTTTGATTCATCCGCTCAGCTACACCGTTCTGCTGTGGTGTATTTCTGACTGTACGATGTCGAGCAATCCCTTCATCCTTACAGAATTGATCAAATTCAGACCAACAGAATTCCAGCCCATTATCAGTTCGCAACCTCTTGATCTTCTTCCCTGTTTGATTTTCCATCAAAATTTTCCACTCCTTGAACTTCTGGAAGGCTTCACTTTTATGCTTCATCATGTACACCCAAGTCATCCTTGAGTAGTCATCAATAATGGACACAAAAAATCTGCAGCCTCCCAAAGACTCAACACGGCATGGACCCCAGCAATCAGAATGGATATAATCAAGTGTGCCTTTTGTTCTATGAATGGCCTTTGGAAACTTGTTGCGATGTAGTTTTCCAAAAACACAATGTTCACAAAACTCTAGGCTCTTAACCTTATGACCAGCAAGTAAATCCTCCTTTGACAGAATTTGCATCCCTCTTTCACCCATATGACCAAGTCTCATGTGCCATAACTTAGTCATATCCTTCTGGTGAAATTCTGACGATGCAACATGGGCTGAACCTGTAACCGTGGAACCTTGTAGAAAATACAAAGTACCACGCATGACACCTTTCAGAATCAAATTTGAACCCTTCCAGACCCGCAAGACTCCATCTTTTCCCGACCAGCTGAATCCCTTGCTGTCCAAAAGACTGAGAGATATCAGATTTTTCGTCATCAATGGAACGTGCCTGACCTCGTTCAATGTGCAGAAGCTACCGTCATGTGTCCTTATCTTGATCGAGCCTGTCCCAACCACCTTGCAGACAGAACTGTTGGCCATCGAGATGCTGCCTCCGTCTACCTACTCATAAGTCGTGAACCACTCTCTCCTAGGACAGATGTGATAGGATGCCCCAGAATCGAGAACCCACACATCTGAATGATGAGTGTGCTCATCCGCGACTAGGGCAATATCTTCTTCAGAATTGGTGTCTTCTTCAGCAACAGCAGCAGACACTGATTGTTTTTCCGATTGCTTCTTCTTCTTCGGACAATCAAATTTCCAATGTCCCTTCTCCTTGCAGTAATTACAAACATCATCCGGCTTTGCACCCTTCGACATCGGCTTATTTTTCTTTCCGCCGTTTTTCCTTCCCTTTCCGCTACTGGTGAGCAGACCGGAAGGCTGTATGTCCGTACTTGTGCCGTTAGCCTTATGCCGTAATTCCCTGCTATGAAGGGCCGATCTGACTTCTTCCAGTGACACAGTATCTTTCCCAACAATGAACGATTGAACAAAATTCTCAAACGACATTGGGAGAGATACTAACAGAATCAGGGCAGCATCTTCATCCTCGATCTTCACATCGATATTACGCAATTCTAATAACAAAGTATTCAATTGCTCTAAGTGTTCCCTGAGTTGTGTACCTTCAGCCATTCGTAAACCGAATAGACGTTGTTTCAGAAGCAGCTTGTTGGTTAGAGATTTTGTCATGTACAAACTCTCCAGCTTCAACCACAGACCAGCAGCAGTCTCTTCATCCGAGACCTCCGTGATGACGTCATCCGCGAGACACAGCATGATCGTCGAGTGCGCCTTTTCCTCCAGAATCGCCATCTCAGGAGTAACGACGGCGTTCTTGTCTTTCGACAACGGCGCCCAGAAGCCTTGCTGTTTCAACAAGGCCCGCATCTTGATCTGCCATAAACTGAAACTGTTCCTCCCTGTGAATTTGTCGATTTTCACGTTCAAAGCAGACATCTCGAATTCTCCAAGAACACCGATTAACCGAGAGGCTCTGATACCAATTTGTTGTGCGGAATTTGAGATAATACGAGAAAATATAAACGCGAAAAACAAGACAACAGATTTACGTGGTTCACCAATAAATTGGCTACGTCCACGGGAAGAGGGGGAGCAGTTTTATTATGGAGAGGCAAAAACAGAATTACAGAATAGGGTTTCCCATAGCGTCTATATATAGTGCTAAGCTACGCCCTAACAGGCTTGGGCCCAACATACAGAATCAACAGAAAATTAAGGGCCCAATACAACAACATTGTATACCGTCGGGCCGGGGGCGTCTCCACCCCCCGGACCCCCAGGCCAGGGGGCGCGTCGCCCCCCTAGACCCCCCGACTCGCTGACCGGGCAGCAAGACCCCCGTCCTTTCTGTTTGTAGCGGGTCCGATTCAAGGCATTCAACAATATAAATAGCGGATGTTAAACTCTGCTTTTAACTTCTTATATTTATTTCTTCATAATTTGATTATTTAGTGAAATTTTAGGCTCGATTGTCGTGTGTTATGTAGATACTGAAAATCGATTTTCTCAAAAAGTAAAAATGATATGACTTGTGACAAAACAAAAGTAGAAATGATATGATTTATGACAGGAGAGGATCTAAGAAGCAAAAAGAGATGTCGGTATAATATGGAGTTTCTAATTCTCCCTTAAGGGGATGAAAAGATGTTTTGAAGTTTCAAAATAACTAATTCGGCTTTGTACGGTGTTGGTGATCTCACTTAATGAGCAAGCACTCACTAGTCACTATCTTAGTTTCTTCGATTCTCAGAGACCTCTGATTAAGGGTAGAGGGTGTGCTCGCATCTATTCCACCTAGTAAGACTTGTGGACTTCTTAAAGTTATCTAAGAAATGTTCTTATAAGATTGATCTAGGCCTTGGACAGTTTTTTGAGAACAGCCTCAAAAAGTTGTGAAAATTTGAAGGATGATCATTTTTTTTTACCGTGGTATCGGGGCTAATTTTTAATTCCATGGAATATCTGACACCTTCCACCAGCAACATGTACCAGATCACTCTATCCACCAAGGCTAAAACGGGTGGGAAGGATGATTACTTTTTAATACAAAGTTCTTCAAACTCAATTGTGTTTGTACTGGTTTGTTATTCAGAAAGGCATGATTATGATTTATAACCCGTTACTTTGCAAATCTATCTGCATTATTTACTCCACCTATGCTTTGGAAATGCTTACAACAATATCCATAAGTTTGTAACATTTAAAAGAGTAATTTTACTGTTTTAATGAAACAAGATGAAATGACTTATAGAGGGAACATAAGAACATGATAATAGGGACACATTAAATATGTAACAATTAAAAGAAAATGTAACATATATGCAATATTCAAGATTTAGCGAGAAATTGTGGAAGTAAGTTTGGTTGATCTTGGTTTCTTAATTTTTAAGTGGTTCAGAATTGGCTTGATTCGAAACCAAAAACATTATTTTGTTGTGCTTTTATTCTTTTATGGATGTTTCATTCTGTTTTGATTGAAAAAACCAAATAATTACTTGCTTGTTTCGAACAAAGTTGTAGGACCAGGCGGTCTGAAAATAGCTTTGCCTATCATTTCAAATATCATAATATGTTTGTAGTTATAAGGTATTTGAACATAAGAAAGTGAGGTGTATATGCATTGTTTTCCGTGTGCCTGACTTTTTAGTTTTACTGGTATAGACAGATATGTTAGGAAAGGAACAAGATGAATTTTGGAAATTATAGCTAGCTCTGATTAACAGATAATTTCATTTGTGGCATGTTTTTCACAAACGTTTAATTCTCAGGTTAAGCTTGATACTTTAAAGGAGAAAAAAATTGGTTTCTACTTTTCAGCATCATGGTGTGGTCCGTGCAAACATTTCACCCCAAATTTGGTAGAGGCGTACAATGCTCTCCTACCAAAAGGAGACTTTGAAGTTGTTTTCCTTACTGCTGATATGGATGATGAATCTTTTAAGGAGTACTTTTCTAAAATGCCTTGGCTCGCTGTCCCATTCTCTGATTCTGAAACACGTAAACGTTTGAATGAATTGTTTGCTGTTAGGGGAATACCCCACTTAGTGATCCTT</genome_strand>
        <mrna_strand>CAGATCGTGACTTTCTTATTCGCAACAATGGTGACAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTTAAGCTTGATACTTTAAAGGAGAAAAAAATTGGTTTGTACTTTTCAGCATCATGGTGTGGTCCGTGCAAACATTTCACCCCAAATTTGGTAGAGGCGTACAATGCTCTCCTACCAAAAGGAGACTTTGAAGTTGTTTTCCTTACTACTGATATGGATGATGAATCTTTTAAGGAGTACTTTTCTAAAATGCCTTGGCTCGCTGTCCCATTCTCTGATTCTGAAACACGTAAACGTTTGAATGAATTGTTTGCTGGTAGGGGAATACCCCACTTAGTGATCCTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>3</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="-" PGL_start="24227" PGL_stop="21118"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="24227" e_stop="23969"/>
            <exon e_start="23792" e_stop="23732"/>
            <exon e_start="22912" e_stop="22766"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.961"/>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.961">
            <gDNA_exon_boundary e_start="24227" e_stop="23969" e_length="259"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="23968" i_stop="23793" i_length="176"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="23792" e_stop="23732" e_length="61"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23731" i_stop="22913" i_length="819"/>
          </intron>
          <exon e_serial="3" e_score="0.993">
            <gDNA_exon_boundary e_start="22912" e_stop="22766" e_length="147"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24227" stop="23969"/>
              <exon start="23792" stop="23732"/>
              <exon start="22912" stop="22766"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M2004" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTATCTATCATGCACATAAATTGTTTGAGGAAAATACTGAGTGAGGGGTAAAAAAACCAGCTGGAAAGAAAGAAGAACAATGGAAGCTCTGTTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCTTTCTCTTCTCTTCACTCTCCATTTTCTTCTATTTCTGTTCTTAGAGTAAAGGGTAGCAAAAAAGCTGAAACTTTTATTCAAAGAAGCAATTTTTCCACTGTTTTGCCACTTAGAGTCTCT : TAACCCTGTTGATTTTAAACGACGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCA : ACTGTGCCAGGTTATGATGTTGCTGGTGTGGTAGTGAAAGTTGGTAGTCAGGTAAAGGGATTAAAAGAAGGGGATGAAGTATATGGAGATATACATGAGAAAGCATTAGATGGACCAAAGCAATTTGGATCCTTAGCTGAGTACACT</gDNA_template>
            <first_frame> L  S  I  M  H  I  N  C  L  R  K  I  L  S  E  G  *  K  N  Q  L  E  R  K  K  N  N  G  S  S  V  I  F  H  Y  S  S  T  Q  T  P  S  S  T  L  F  F  L  F  S  S  L  S  I  F  F  Y  F  C  S  *  S  K  G  *  Q  K  S  *  N  F  Y  S  K  K  Q  F  F  H  C  F  A  T  *  S  L   : L  T  L  L  I  L  N  D  G  S  E  N  L  R  P  L  I  L  H  F  Q :   L  C  Q  V  M  M  L  L  V  W  *  *  K  L  V  V  R  *  R  D  *  K  K  G  M  K  Y  M  E  I  Y  M  R  K  H  *  M  D  Q  S  N  L  D  P  *  L  S  T   </first_frame>
            <second_frame>  Y  L  S  C  T  *  I  V  *  G  K  Y  *  V  R  G  K  K  T  S  W  K  E  R  R  T  M  E  A  L  L  S  S  T  T  L  Q  L  K  P  L  H  P  P  S  S  F  S  S  L  H  S  P  F  S  S  I  S  V  L  R  V  K  G  S  K  K  A  E  T  F  I  Q  R  S  N  F  S  T  V  L  P  L  R  V  S  :  *  P  C  *  F  *  T  T  A  R  K  I  *  G  H  *  F  S  T  S   : N  C  A  R  L  *  C  C  W  C  G  S  E  S  W  *  S  G  K  G  I  K  R  R  G  *  S  I  W  R  Y  T  *  E  S  I  R  W  T  K  A  I  W  I  L  S  *  V  H  </second_frame>
            <third_frame>   I  Y  H  A  H  K  L  F  E  E  N  T  E  *  G  V  K  K  P  A  G  K  K  E  E  Q  W  K  L  C  Y  L  P  L  L  F  N  S  N  P  F  I  H  P  L  L  S  L  L  F  T  L  H  F  L  L  F  L  F  L  E  *  R  V  A  K  K  L  K  L  L  F  K  E  A  I  F  P  L  F  C  H  L  E  S  L :   N  P  V  D  F  K  R  R  L  G  K  F  K  A  T  D  S  P  L  P  :  T  V  P  G  Y  D  V  A  G  V  V  V  K  V  G  S  Q  V  K  G  L  K  E  G  D  E  V  Y  G  D  I  H  E  K  A  L  D  G  P  K  Q  F  G  S  L  A  E  Y  T </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLe0086I08.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24039" stop="23969"/>
                    <exon start="23792" stop="23732"/>
                    <exon start="22912" stop="22766"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>279</number_coding_nucleotides>
                  <number_encoded_amino_acids>93</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RVAKKLKLLFKEAIFPLFCHLESLNPVDFKRRLGKFKATDSPLPTVPGYDVAGVVVKVGSQVKGLKEGDEVYGDIHEKALDGPKQFGSLAEYT</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C05SLe0086I08.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24187" stop="23969"/>
                    <exon start="23792" stop="23790"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>219</number_coding_nucleotides>
                  <number_encoded_amino_acids>73</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGKKTSWKERRTMEALLSSTTLQLKPLHPPSSFSSLHSPFSSISVLRVKGSKKAETFIQRSNFSTVLPLRVS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="24204" e_stop="23732"/>
            <exon e_start="22912" e_stop="22589"/>
            <exon e_start="22076" e_stop="21917"/>
            <exon e_start="21427" e_stop="21118"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.999" e_score="0.970"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="0.951"/>
          <exon-intron don_prob="0.949" acc_prob="0.970" e_score="0.975"/>
          <exon-only e_score="0.935"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.970">
            <gDNA_exon_boundary e_start="24204" e_stop="23732" e_length="473"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.999">
            <gDNA_intron_boundary i_start="23731" i_stop="22913" i_length="819"/>
          </intron>
          <exon e_serial="2" e_score="0.951">
            <gDNA_exon_boundary e_start="22912" e_stop="22589" e_length="324"/>
          </exon>
          <intron i_serial="2" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="22588" i_stop="22077" i_length="512"/>
          </intron>
          <exon e_serial="3" e_score="0.975">
            <gDNA_exon_boundary e_start="22076" e_stop="21917" e_length="160"/>
          </exon>
          <intron i_serial="3" don_prob="0.949" acc_prob="0.970">
            <gDNA_intron_boundary i_start="21916" i_stop="21428" i_length="489"/>
          </intron>
          <exon e_serial="4" e_score="0.935">
            <gDNA_exon_boundary e_start="21427" e_stop="21118" e_length="310"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="24204" stop="23732"/>
              <exon start="22912" stop="22589"/>
              <exon start="22076" stop="21917"/>
              <exon start="21427" stop="21118"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M6692-2" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTGAGGAAAATACTGAGTGAGGGGTAAAAAAACCAGCTGGAAAGAAAGAAGAACAATGGAAGCTCTGTTATCTTCCACTACTCTTCAACTCAAACCCCTTCATCCACCCTCTTCTTTCTCTTCTCTTCACTCTCCATTTTCTTCTATTTCTGTTCTTAGAGTAAAGGGTAGCAAAAAAGCTGAAACTTTTATTCAAAGAAGCAATTTTTCCACTGTTTTGCCACTTAGAGTCTCTGCTAGTTCTCAAGCAGCAGCTGCTGAAACATCCACAAGCATTTCTATTCCTTCTGAAATGAAAGCTTGGAGTTATACTGATTATGGAAGTGTTGATGTTTTGAAGTTGGAGTCCAATGTTGCAGTTCCTGACATTAAGGAAGATCAAGTCTTGATTAAGATTGTTGCTGCTGCTCTTAACCCTGTTGATTTTAAACGACGGCTCGGAAAATTTAAGGCCACTGATTCTCCACTTCCA : ACTGTGCCAGGTTATGATGTTGCTGGTGTGGTAGTGAAAGTTGGTAGTCAGGTAAAGGGATTAAAAGAAGGGGATGAAGTATATGGAGATATACATGAGAAAGCATTAGATGGACCAAAGCAATTTGGATCCTTAGCTGAGTACACTGCTGTTGAAGAGAAACTAGTTGCTTTGAAACCCAAGAATCTTAGTTTTGCGGAGGCTGCTGCTCTTCCTCTAGCTATTGAGACTGCTTATGAAGGTCTTGAGAAAGCTGGATTTTCTTCTGGCAAATCCATTCTTGTTTTGGGAGGTGCTGGCGGTGTTGGATCCCTAGTAATCCAG : CTTGCTAAACATGTATTTGGTGCTTCTAAAGTAGCAGCTACCTCTAGCACAGGGAAGTTGGAACTCCTGAAAAGCTTAGGAGCTGATTTAGCTATTGACTACACTAAGGAGAATTTTGAAGATCTGCCTGACAAGTTTGATGTTGTTTATGATTCAGTTG : GTCAGGGTGAAAAGGCGGTGAAGGTAGTGAAGGAAGGTGGGAGTGTGGTAGTGCTAACAGGGGCAGTAACTCCACCAGGTTTTAGATTTGTGGTGACATCAAATGGAGAGATGTTGAAGAAACTGAACCCATACTTGGAAAGTGGGAAGGTGAAACCAGTGATAGATCCAAAGGGACCATTCTCATTTGATAAGGTTGTGGATGCTTTCTCTTATCTTGAAACTGGAAGAGCCACTGGGAAAGTTGTTATTCATCCCATTCCTTGAAAGTTAGCTCTTATTTTGTACAATTTCTAATACATTTAGGGAAA</gDNA_template>
            <first_frame> F  E  E  N  T  E  *  G  V  K  K  P  A  G  K  K  E  E  Q  W  K  L  C  Y  L  P  L  L  F  N  S  N  P  F  I  H  P  L  L  S  L  L  F  T  L  H  F  L  L  F  L  F  L  E  *  R  V  A  K  K  L  K  L  L  F  K  E  A  I  F  P  L  F  C  H  L  E  S  L  L  V  L  K  Q  Q  L  L  K  H  P  Q  A  F  L  F  L  L  K  *  K  L  G  V  I  L  I  M  E  V  L  M  F  *  S  W  S  P  M  L  Q  F  L  T  L  R  K  I  K  S  *  L  R  L  L  L  L  L  L  T  L  L  I  L  N  D  G  S  E  N  L  R  P  L  I  L  H  F  Q :   L  C  Q  V  M  M  L  L  V  W  *  *  K  L  V  V  R  *  R  D  *  K  K  G  M  K  Y  M  E  I  Y  M  R  K  H  *  M  D  Q  S  N  L  D  P  *  L  S  T  L  L  L  K  R  N  *  L  L  *  N  P  R  I  L  V  L  R  R  L  L  L  F  L  *  L  L  R  L  L  M  K  V  L  R  K  L  D  F  L  L  A  N  P  F  L  F  W  E  V  L  A  V  L  D  P  *  *  S  S :   L  L  N  M  Y  L  V  L  L  K  *  Q  L  P  L  A  Q  G  S  W  N  S  *  K  A  *  E  L  I  *  L  L  T  T  L  R  R  I  L  K  I  C  L  T  S  L  M  L  F  M  I  Q  L  :  V  R  V  K  R  R  *  R  *  *  R  K  V  G  V  W  *  C  *  Q  G  Q  *  L  H  Q  V  L  D  L  W  *  H  Q  M  E  R  C  *  R  N  *  T  H  T  W  K  V  G  R  *  N  Q  *  *  I  Q  R  D  H  S  H  L  I  R  L  W  M  L  S  L  I  L  K  L  E  E  P  L  G  K  L  L  F  I  P  F  L  E  S  *  L  L  F  C  T  I  S  N  T  F  R  E  </first_frame>
            <second_frame>  L  R  K  I  L  S  E  G  *  K  N  Q  L  E  R  K  K  N  N  G  S  S  V  I  F  H  Y  S  S  T  Q  T  P  S  S  T  L  F  F  L  F  S  S  L  S  I  F  F  Y  F  C  S  *  S  K  G  *  Q  K  S  *  N  F  Y  S  K  K  Q  F  F  H  C  F  A  T  *  S  L  C  *  F  S  S  S  S  C  *  N  I  H  K  H  F  Y  S  F  *  N  E  S  L  E  L  Y  *  L  W  K  C  *  C  F  E  V  G  V  Q  C  C  S  S  *  H  *  G  R  S  S  L  D  *  D  C  C  C  C  S  *  P  C  *  F  *  T  T  A  R  K  I  *  G  H  *  F  S  T  S   : N  C  A  R  L  *  C  C  W  C  G  S  E  S  W  *  S  G  K  G  I  K  R  R  G  *  S  I  W  R  Y  T  *  E  S  I  R  W  T  K  A  I  W  I  L  S  *  V  H  C  C  *  R  E  T  S  C  F  E  T  Q  E  S  *  F  C  G  G  C  C  S  S  S  S  Y  *  D  C  L  *  R  S  *  E  S  W  I  F  F  W  Q  I  H  S  C  F  G  R  C  W  R  C  W  I  P  S  N  P   : A  C  *  T  C  I  W  C  F  *  S  S  S  Y  L  *  H  R  E  V  G  T  P  E  K  L  R  S  *  F  S  Y  *  L  H  *  G  E  F  *  R  S  A  *  Q  V  *  C  C  L  *  F  S  W :   S  G  *  K  G  G  E  G  S  E  G  R  W  E  C  G  S  A  N  R  G  S  N  S  T  R  F  *  I  C  G  D  I  K  W  R  D  V  E  E  T  E  P  I  L  G  K  W  E  G  E  T  S  D  R  S  K  G  T  I  L  I  *  *  G  C  G  C  F  L  L  S  *  N  W  K  S  H  W  E  S  C  Y  S  S  H  S  L  K  V  S  S  Y  F  V  Q  F  L  I  H  L  G  K </second_frame>
            <third_frame>   *  G  K  Y  *  V  R  G  K  K  T  S  W  K  E  R  R  T  M  E  A  L  L  S  S  T  T  L  Q  L  K  P  L  H  P  P  S  S  F  S  S  L  H  S  P  F  S  S  I  S  V  L  R  V  K  G  S  K  K  A  E  T  F  I  Q  R  S  N  F  S  T  V  L  P  L  R  V  S  A  S  S  Q  A  A  A  A  E  T  S  T  S  I  S  I  P  S  E  M  K  A  W  S  Y  T  D  Y  G  S  V  D  V  L  K  L  E  S  N  V  A  V  P  D  I  K  E  D  Q  V  L  I  K  I  V  A  A  A  L  N  P  V  D  F  K  R  R  L  G  K  F  K  A  T  D  S  P  L  P  :  T  V  P  G  Y  D  V  A  G  V  V  V  K  V  G  S  Q  V  K  G  L  K  E  G  D  E  V  Y  G  D  I  H  E  K  A  L  D  G  P  K  Q  F  G  S  L  A  E  Y  T  A  V  E  E  K  L  V  A  L  K  P  K  N  L  S  F  A  E  A  A  A  L  P  L  A  I  E  T  A  Y  E  G  L  E  K  A  G  F  S  S  G  K  S  I  L  V  L  G  G  A  G  G  V  G  S  L  V  I  Q  :  L  A  K  H  V  F  G  A  S  K  V  A  A  T  S  S  T  G  K  L  E  L  L  K  S  L  G  A  D  L  A  I  D  Y  T  K  E  N  F  E  D  L  P  D  K  F  D  V  V  Y  D  S  V   : G  Q  G  E  K  A  V  K  V  V  K  E  G  G  S  V  V  V  L  T  G  A  V  T  P  P  G  F  R  F  V  V  T  S  N  G  E  M  L  K  K  L  N  P  Y  L  E  S  G  K  V  K  P  V  I  D  P  K  G  P  F  S  F  D  K  V  V  D  A  F  S  Y  L  E  T  G  R  A  T  G  K  V  V  I  H  P  I  P  *  K  L  A  L  I  L  Y  N  F  *  Y  I  *  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLe0086I08.1" strand="-"/>
                <serials PGL_serial="1" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="24187" stop="23732"/>
                    <exon start="22912" stop="22589"/>
                    <exon start="22076" stop="21917"/>
                    <exon start="21427" stop="21162"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1203</number_coding_nucleotides>
                  <number_encoded_amino_acids>401</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VRGKKTSWKERRTMEALLSSTTLQLKPLHPPSSFSSLHSPFSSISVLRVKGSKKAETFIQRSNFSTVLPLRVSASSQAAAAETSTSISIPSEMKAWSYTDYGSVDVLKLESNVAVPDIKEDQVLIKIVAAALNPVDFKRRLGKFKATDSPLPTVPGYDVAGVVVKVGSQVKGLKEGDEVYGDIHEKALDGPKQFGSLAEYTAVEEKLVALKPKNLSFAEAAALPLAIETAYEGLEKAGFSSGKSILVLGGAGGVGSLVIQLAKHVFGASKVAATSSTGKLELLKSLGADLAIDYTKENFEDLPDKFDVVYDSVGQGEKAVKVVKEGGSVVVLTGAVTPPGFRFVVTSNGEMLKKLNPYLESGKVKPVIDPKGPFSFDKVVDAFSYLETGRATGKVVIHPIP*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="37923" PGL_stop="31143"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37923" e_stop="37886"/>
            <exon e_start="31427" e_stop="31143"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="1.000" acc_prob="0.857" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37923" e_stop="37886" e_length="38"/>
          </exon>
          <intron i_serial="1" don_prob="1.000" acc_prob="0.857">
            <gDNA_intron_boundary i_start="37885" i_stop="31428" i_length="6458"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="31427" e_stop="31143" e_length="285"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37923" stop="37886"/>
              <exon start="31427" stop="31143"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-M1867" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CAGATCGTGACTTTCTTATTCGCAACAATGGTGACAAG : GTTAAGCTTGATACTTTAAAGGAGAAAAAAATTGGTTTCTACTTTTCAGCATCATGGTGTGGTCCGTGCAAACATTTCACCCCAAATTTGGTAGAGGCGTACAATGCTCTCCTACCAAAAGGAGACTTTGAAGTTGTTTTCCTTACTGCTGATATGGATGATGAATCTTTTAAGGAGTACTTTTCTAAAATGCCTTGGCTCGCTGTCCCATTCTCTGATTCTGAAACACGTAAACGTTTGAATGAATTGTTTGCTGTTAGGGGAATACCCCACTTAGTGATCCTT</gDNA_template>
            <first_frame> Q  I  V  T  F  L  F  A  T  M  V  T  R :   L  S  L  I  L  *  R  R  K  K  L  V  S  T  F  Q  H  H  G  V  V  R  A  N  I  S  P  Q  I  W  *  R  R  T  M  L  S  Y  Q  K  E  T  L  K  L  F  S  L  L  L  I  W  M  M  N  L  L  R  S  T  F  L  K  C  L  G  S  L  S  H  S  L  I  L  K  H  V  N  V  *  M  N  C  L  L  L  G  E  Y  P  T  *  *  S   </first_frame>
            <second_frame>  R  S  *  L  S  Y  S  Q  Q  W  *  Q   : G  *  A  *  Y  F  K  G  E  K  N  W  F  L  L  F  S  I  M  V  W  S  V  Q  T  F  H  P  K  F  G  R  G  V  Q  C  S  P  T  K  R  R  L  *  S  C  F  P  Y  C  *  Y  G  *  *  I  F  *  G  V  L  F  *  N  A  L  A  R  C  P  I  L  *  F  *  N  T  *  T  F  E  *  I  V  C  C  *  G  N  T  P  L  S  D  P  </second_frame>
            <third_frame>   D  R  D  F  L  I  R  N  N  G  D  K  :  V  K  L  D  T  L  K  E  K  K  I  G  F  Y  F  S  A  S  W  C  G  P  C  K  H  F  T  P  N  L  V  E  A  Y  N  A  L  L  P  K  G  D  F  E  V  V  F  L  T  A  D  M  D  D  E  S  F  K  E  Y  F  S  K  M  P  W  L  A  V  P  F  S  D  S  E  T  R  K  R  L  N  E  L  F  A  V  R  G  I  P  H  L  V  I  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05SLe0086I08.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37921" stop="37886"/>
                    <exon start="31427" stop="31143"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>321</number_coding_nucleotides>
                  <number_encoded_amino_acids>107</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRDFLIRNNGDKVKLDTLKEKKIGFYFSASWCGPCKHFTPNLVEAYNALLPKGDFEVVFLTADMDDESFKEYFSKMPWLAVPFSDSETRKRLNELFAVRGIPHLVIL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 45 chains have been computed
$ 
$ memory statistics:
$ 7096 bytes spliced alignments in total
$ 3 spliced alignments have been stored
$ 2365 bytes was the average size of a spliced alignment
$ 6984 bytes predicted gene locations in total
$ 2 predicted gene locations have been stored
$ 3492 bytes was the average size of a predicted gene location
$ 0 megabytes was the average size of the backtrace matrix
$ 46 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 05:43:59
-->
