<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 05:49:51"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U329489" ref_strand="+" ref_description="SGN-U329489        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | nucleoside phosphatase family protein / GDA1/CD39 family protein, low similarity to SP:P55772 Ectonucleoside triphosphate diphosphohydrolase 1 (EC 3.6.1.5) (Ecto-apyrase) {Mus musculus}; contains Pfam profile PF01150: GDA1/CD39 (nucleoside phosphatase) family | chr2:865069-868288 REVERSE | Aliases: T17M13.14, T17M13_14(evalue: 1e-39, score=160) genbank/nr: gi|49533770|gb|AAT66769.1| putative apyrase-like protein [Solanum demissum] (evalue: 9e-78, score=244)">
      <seq>aaagaccaaccaacaacaagaaaagtttttgtgaagaggactggtcaagtttgaaaagcaaatacccctcccttcaagaggaggacttgcatcgttattgcttctcttcagcgtatatattggcattacttcatgatagtcttggaattgctttggatgatgataggattggatatgctaatcaagttgaaaacattccacttgattgggcattgggagcattcatcttgcagagcacagctgagttggacaaagagcattctgggtggtttgcaaatatgttcagtgaggactctctcattttgcttctcttctttgcctttttcattttggtgatgttcaccgcatggtatgtgtcaaagtggagaaagccacaattgaagactgtgtatgatctagagaaaggaaagtacatagtcacacgtgttggtagatgttcatagattgttttataggagtagaagccattttcctgcatctgtggataaggcggaaggaccaaagtagatcatcaactacctcatccaagaatctctgcacactttgttgcttggtaccccgagctaaagatgctatacttaggcgaagtcagatcaatcttatgggactgtagctacccaactcaagaaggtgtctcggtctctatttattgttatgaagcagaaaatcttcctgtaagaatgttatagtcggtatgaggaagcagatatactagaaacttagaagagctcgtcttgttttggttgctcaccaagtataccatttacactatagtcattactcattaacatatttccttcacaaagtagttgcctgtatccttcccctggaggggggttgggtgtagaactgaagatttctcattgcgtggtaaataatttgaatttattcttaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="1" stop="1559"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="12" g_stop="178" g_length="167"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="166" r_length="166" r_score="0.910"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="179" i_stop="536" i_length="358">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.920" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="537" g_stop="1259" g_length="723"/>
          <reference_exon_boundary r_type="cDNA" r_start="167" r_stop="892" r_length="726" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="894" polyA_stop="903"/>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U329489" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>890</cumulative_length_of_scored_exons>
        <coverage percentage="0.986" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U329489" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="12" e_stop="178"/>
          <exon e_start="537" e_stop="1259"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTGATCTTATGGCGGCTGGGAAAAGTTTTTGTGAAGAGGACTGGTCAAGTTTGAAAAGCAAATACCCCTCCCTTCAAGAGGAGGACTTGCATCGTTATTGCTTCTCTTCAGCGTATATATTGGCATTACTTCATGATAGTCTTGGAATTGCTTTGGATGATGATAGGTACTTACTAATTTTGATATCCTTCTTTGTATATCCTTTTTAATTCTTCCTGCTGTCTTCTTGACTTAAGAAGAAAGCTCAAACATTCTGCTGCTTGCTTTTCACATAGCTTTCCAAGTTTTAATGATGGGTTCTTGGTTAAGTATCTTATCTACCGTTCCTCCTCCTTCCCGAGGCTCGTCTCTTCTTTTATGAAGTGAATAGTTAAAATCTACTGAAAAACATAGATGATAAGAGAATCTTCATCAAAAAAAAAATATTAATTTATACATATTACTTCCAAAATCTGTTTGAAGAAGCACATATAGTTAATATATATTTTACCATCCCACTTAAATTCAAGTATATGTTTGAGCAGGATTGGATATGCTAATCAAGTTGAAAACATTCCACTTGATTGGGCATTGGGAGCATTCATCTTGCAGAGCACAGCTGAGTTGGACAAAGAGCATTCTGGGTGGTTTGCAAATATGTTCAGTGAGGACTCTCTCATTTTGCTTCTCTTCTTTGCCTTTTTCATTTTGGTGATGTTCACCGCATGGTATGTGTCAAAGTGGAGAAAGCCACAATTGAAGACTGTGTATGATCTAGAGAAAGGAAAGTACATAGTCACACGTGTTGGTAGATGTTCATAGATTGTTTTATAGGAGTAGAAGCCATTTTCCTGCATCTGTGGATAAGGCGGAAGGACCAAAGTAGATCATCAACTACCTCATCCAAGAATCTCTGCACACTTTGTTGCTTGGTACCCCGAGCTAAAGATGCTATACTTAGGCGAAGTCAGATCAATCTTATGGGACTGTAGCTACCCAACTCAAGAAGGTGTCTCGGTCTCTATTTATTGTTATGAAGCAGAAAATCTTCCTGTAAGAATGTTATAGTCGGTATGAGGAAGCAGATATACTAGAAACTTAGAAGAGCTCGTCTTG-TTTGGTTGCTCACCAAGTATACCATTTACACTATAGTCATTACTCATTAACATATTTCCTTCACAAAGTAGTTGCCTGTATCCATCCCCTGGAGGGGGGTT-GGTGTAGAACTGAAGATTTCTCA-TGGGTGGTAAATAATTTGAATTTATTCT</genome_strand>
        <mrna_strand>AAAGACCAACCAACAAC-AAGAAAAGTTTTTGTGAAGAGGACTGGTCAAGTTTGAAAAGCAAATACCCCTCCCTTCAAGAGGAGGACTTGCATCGTTATTGCTTCTCTTCAGCGTATATATTGGCATTACTTCATGATAGTCTTGGAATTGCTTTGGATGATGATAG......................................................................................................................................................................................................................................................................................................................................................................GATTGGATATGCTAATCAAGTTGAAAACATTCCACTTGATTGGGCATTGGGAGCATTCATCTTGCAGAGCACAGCTGAGTTGGACAAAGAGCATTCTGGGTGGTTTGCAAATATGTTCAGTGAGGACTCTCTCATTTTGCTTCTCTTCTTTGCCTTTTTCATTTTGGTGATGTTCACCGCATGGTATGTGTCAAAGTGGAGAAAGCCACAATTGAAGACTGTGTATGATCTAGAGAAAGGAAAGTACATAGTCACACGTGTTGGTAGATGTTCATAGATTGTTTTATAGGAGTAGAAGCCATTTTCCTGCATCTGTGGATAAGGCGGAAGGACCAAAGTAGATCATCAACTACCTCATCCAAGAATCTCTGCACACTTTGTTGCTTGGTACCCCGAGCTAAAGATGCTATACTTAGGCGAAGTCAGATCAATCTTATGGGACTGTAGCTACCCAACTCAAGAAGGTGTCTCGGTCTCTATTTATTGTTATGAAGCAGAAAATCTTCCTGTAAGAATGTTATAGTCGGTATGAGGAAGCAGATATACTAGAAACTTAGAAGAGCTCGTCTTGTTTTGGTTGCTCACCAAGTATACCATTTACACTATAGTCATTACTCATTAACATATTTCCTTCACAAAGTAGTTGCCTGTATCCTTCCCCTGGAGGGGGGTTGGGTGTAGAACTGAAGATTTCTCATTGCGTGGTAAATAATTTGAATTTATTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U317433" ref_strand="+" ref_description="SGN-U317433        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | zinc finger (C3HC4-type RING finger) family protein, contains Pfam profile PF00097: Zinc finger, C3HC4 type (RING finger); contains PROSITE PS00190: Cytochrome c family heme-binding site signature | chr2:862086-864395 REVERSE | Aliases: None(evalue: 4e-68, score=255) genbank/nr: gi|49533771|gb|AAT66770.1| putative zinc finger protein [Solanum demissum] (evalue: 3e-123, score=445)">
      <seq>ttttttttttttttaacaaggaagaaagcttagaccaaaaaagtgtagaaaacaacaaacaaaccgcaatagtttggtatttttttcggaaaaatctaagataaatactataatttagcaaacacccttcaatttgttccgctataaatccgcagaaatttttgggtttttttctttctctttccatttgctgaatttcttcattttcccaggaattgtgttactttttttatctgggtttttacaatgggagattgtttggtggtgcatacggatcgtattgtgaaggctaatggagctgagattatggatgggaagaatcctgaaatggtagggtcttcgtcggcaatagctgtagatgagaagaaggtgctggaggaggaggaggaggaggagggtgatgaggaggtgccgttaattggtagagcagagtgcaggatttgccaggaggaggattctttggacaagttggagagcccatgtgcttgcagtggaagtctcaagtacacacaccgagcatgcgttcaacactggtgcaatgagaagggggatattacttgtgagatttgccatcagcaataccagcctggttacactgttcctcctcgacctgtggctgaggagacaattattgatattgggggaggatggcaaatctctggtacccctttgaatttacatgatcctcgcgtcttggcaattgcagaggctgaacgccaacttctggaagctgaatatgatgattacaattctgcaaatgcaagtggtgcagctttctttcgatcggctgctttaattttgatggctcttctactattgcgccatgcattaccaatgacagatacagatggagatgatgaagatccaactgctttcttttcgcttttcttactccgggcagttggctttcttttaccctgctacatcatgctctgggccatcagcatcttgcagcagcgcagacaaagagaggaagctgcagcattggcagcaacacaatttgcagttgtgttacactttggacagccgagaagtgtacagtttaccatagcttcagttgcaccagcaacaccagcagcgcctgcttcagtggataatgtttaaacaacaagatgatcgtgcttgatcttttattttgaagctaaatactgccttatgctagatttgtttgtctgttatcatatttcatatattattatatggggaagttcgaaaatgaattgttgtattaccattttgcccccctttactgttttaaaaatttgattaaatataaatatttttaattaaaaaaaaaaaaaaaaaaaaaaaaaaaaactcgagactagttctc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="1906" stop="61072"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2206" g_stop="2417" g_length="212"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="212" r_length="212" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2418" i_stop="2706" i_length="289">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2707" g_stop="2998" g_length="292"/>
          <reference_exon_boundary r_type="cDNA" r_start="213" r_stop="504" r_length="292" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="2999" i_stop="3893" i_length="895">
            <donor d_prob="0.933" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3894" g_stop="3965" g_length="72"/>
          <reference_exon_boundary r_type="cDNA" r_start="505" r_stop="576" r_length="72" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3966" i_stop="4588" i_length="623">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="4589" g_stop="4653" g_length="65"/>
          <reference_exon_boundary r_type="cDNA" r_start="577" r_stop="641" r_length="65" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="4654" i_stop="5130" i_length="477">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="5131" g_stop="5287" g_length="157"/>
          <reference_exon_boundary r_type="cDNA" r_start="642" r_stop="798" r_length="157" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="5288" i_stop="5689" i_length="402">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="5690" g_stop="5773" g_length="84"/>
          <reference_exon_boundary r_type="cDNA" r_start="799" r_stop="882" r_length="84" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="5774" i_stop="5859" i_length="86">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.237" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="5860" g_stop="5949" g_length="90"/>
          <reference_exon_boundary r_type="cDNA" r_start="883" r_stop="972" r_length="90" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="5950" i_stop="6076" i_length="127">
            <donor d_prob="0.988" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="6077" g_stop="6392" g_length="316"/>
          <reference_exon_boundary r_type="cDNA" r_start="973" r_stop="1288" r_length="316" r_score="0.991"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="6393" i_stop="9469" i_length="3077">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.448" a_score="0.58"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="9470" g_stop="9514" g_length="45"/>
          <reference_exon_boundary r_type="cDNA" r_start="1289" r_stop="1333" r_length="45" r_score="0.578"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U317433" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>1333</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U317433" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2206" e_stop="2417"/>
          <exon e_start="2707" e_stop="2998"/>
          <exon e_start="3894" e_stop="3965"/>
          <exon e_start="4589" e_stop="4653"/>
          <exon e_start="5131" e_stop="5287"/>
          <exon e_start="5690" e_stop="5773"/>
          <exon e_start="5860" e_stop="5949"/>
          <exon e_start="6077" e_stop="6392"/>
          <exon e_start="9470" e_stop="9514"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTTTTTTTTTTAACAAGGAAGAAAGCTTAGACCAAAAAAGTGTAGAAAACAACAAACAAACCGCAATAGTTTGGTATTTTTTTCGGAAAAATCTAAGATAAATACTATAATTTAGCAAACACCCTTCAATTTGTTCCGCTATAAATCCGCAGAAATTTTTGGGTTTTTTTCTTTCTCTTTCCATTTGCTGAATTTCTTCATTTTCCCAGGTATGGTTCCTTTTTTTGCTCTTTTATGTCTTAATTTGTAGTTTGATTTGTATTTAGGCTTGAATTTTGAGAAATATCTTAATTTTGCTGAGATTTTTTGGTTCATAGGTCACTTTTATGTTTAGGGTTTGTTTTTTCGTGATTTTTTTTTTAAAAAAAATTGGAAAGTAATGAACTTAGATTAGTTTGAATTGAGAAGAAGTAGTTGATGTTGAGGAATTGGAAAGGAAAGATCTTAACTTTCGTTGTTTATTGAATTGGGAAGTGATTATTGGTAAATTTGGTGTAGGAATTGTGTTACTTTTTTTATCTGGGTTTTTACAATGGGAGATTGTTTGGTGGTGCATACGGATCGTATTGTGAAGGCTAATGGAGCTGAGATTATGGATGGGAAGAATCCTGAAATGGTAGGGTCTTCGTCGGCAATAGCTGTAGATGAGAAGAAGGTGCTGGAGGAGGAGGAGGAGGAGGAGGGTGATGAGGAGGTGCCGTTAATTGGTAGAGCAGAGTGCAGGATTTGCCAGGAGGAGGATTCTTTGGACAAGTTGGAGAGCCCATGTGCTTGCAGTGGAAGTCTCAAGGTGAAATCTTTTTCTCGTTTGGTTTTACTTGCAGGAGAATCTGATCTTTTTATGGTTATATGAAAATTGTTTACAGGACAAAAGGAAATGTGGGGTTAGATTTTCTTCTATTCTTTGTTTTCTTCATATGTGCCTTGAAATTGGAAGCACTTGTGCTTGCATTTGAGCTCAGTTCGATCACCTCCTAATACTGTTTAAATTAGTGATACTCGTTATGTGTATCCCAACTAGTTTGGCGCAAGTAGATATCACCAATATTGATTTGGTGATATCTTGGATGCCATGGTAAGAGGGGGGCGCTATGATGTGTGTGTGTCTGTAGCTTTGCATGAGGATGGTGCGCGTTTTTCTGTTCTTTTCTCTTTTTTCACTCTTTTGGTACCTCAGTATCATGTACTTCTTTTCAAGACTGTTGTTGGGGACCCCCTTTTCAAGCAAGCTTAACTTCACTTGAGTTGTGGTTATCCACCATGATGAGCCAAGACATGACCCTTACTCCTGTTAACAGGATATATCCTGCTATCTGATATAGTCATATCACATTCTACTTTCACTTCAGGAACTCTTTGCTTCCATAGCAGCACTTATTGAGCTATAGCTGTAATATCCTTGCCATTCCTGTCCTCCTGTTGCAGTTGCTTTCTTTTTATACATCTTTCACCCTCATCAAAGGTTTTCCTGCTTACAATCCAATTTTTTCTACTTATTCTCATTTTAGTTGCATAGATGGCAGCACTTTCCTTCTTTGCATTGTTTCCATTTTACTATACAGTAAGTTATGTGATTTTCTTTAATTGCCTGATAACTTAAGAATTGTTGTTTTCTGTCTCGCTTGCTTTGTTTTCTTTCAATTTGTGTGTCTGCTAATTATTTTGGTGGAAAACATTTACTGCAGTACACACACCGAGCATGCGTTCAACACTGGTGCAATGAGAAGGGGGATATTACTTGTGAGATTTGCCATCAGGTATGTGTCAATCTTCCAGTTGGTTTCCAACTTCCCATATTGTCTTGTATATTATAAGATGAAAGACACTGCATTCTATGCGAGAGTACTCCTGCTTGTGCCATTGAGTTCAAACCACAGGGTTCTCTTCCCTCTTGAATAGGAGTGGGGTTTTTAACCTGTCGGCACCCCAAGGGTAGTGGCTGTGGGTTTCCCTTGTCATTTAAAAAAAGGATCTTCTTGCCATGAGATCCTTTGTATTCATTCCTCTCGATTCATGATGGTTATGCAAGTTGACTATTTAAGTTTAAAACTGAACTATCCTTACTTTAAAATCAATATATATTGGCCCTATATTTGCTTAATTTTGTATCATCAAGCTTAGTTTGTTTTTTCAAGACAATGAAGTTTGGACATGTATTCGTCTCTTGGAGCTTCACCTATAGTTGTCCCTCTCTCTTGCTTATCCCTATTCCATAGTGATTTGACAATCAATATTTCTGGAATTATAAATAGCTTGACTCGTGATGATTCCGGAGGAACTCGAGATGCTGGGCTTGATACATTTGAAATTCTTCCCTTTGTCTTGATGCTCATTAGATGAATTCTTTCTGATATGTTTCATTTTCAATTGCAATGTGCAGCAATACCAGCCTGGTTACACTGTTCCTCCTCGACCTGTGGCTGAGGAGACAATTATTGATATTGGGTGAGGTTAAGTTGGTTCATCTTTAAGGTTTCAAAAAAAAAGTTGGTTCATCTTTCATTTGTTTATGTACCACTAATGTGGTGGTAAATTCTCTTTTTTTCTGTAACCTTTTCAATTCAAACAAGCCATGATTAATGTTTTGACCTCTTTGGTTGTGCTTTTAACTAGTCGGTGTGGAATTAGTCACGAGGTTTGACTATTTTACATTCTGTTTAAGGCGGTGGTGCCCAGGTCAGCTTGCGTGCATCTTGACTAATTCCACTAAGTACCTGCCACCTCCCACCTCCTAGGGATAATTTTGTCCACCAAGGCTTGAGTAGATAAAAGAAACCGCCTAGTGTTCTTTTGTTTTCTCTGCTGATATTTGAACTATAGAGACCATGGTTCTCCCTTACTTCACTGACCACTAGGCCTCAAGGGTGCAAACTCGCTTTTATAGTTTTTAAACTAATTTTAAGCCTTCATATTTTGGTGCAGGGGAGGATGGCAAATCTCTGGTACCCCTTTGAATTTACATGATCCTCGCGTCTTGGCAATTGCAGAGGCTGAACGCCAACTTCTGGAAGCTGAATATGATGATTACAATTCTGCAAATGCAAGTGGTGCAGCTTTCTTTCGATCGGCTGCTTTAATTGTAAGCCCTTATACTACTTATTTCCCAAGATAACATTGTGAGCCTATTTACCAAGCAGTGGGTAAATACTTCTTCGTTGAATTTCAGTTAAAAGAATACACTAATCCAATTCAGGGTTTTGTTTGTCTAACTAAAATTTTAGGCAAGAAGTGATTACAATCTACAAATGTTTCTTTTCCCACTGTGCTTAAAGGTTTTTTTAATTTCCAAAGTTTAACTTTTCACATTTTAATTGGTTTCGAAAAAGAAATGCCAAGAGATACCAATCAAAATGCAAAGTGTAGTCGCTTGTTCAAGCTTTATATAAAGATTGGCCTCTCAGTTGCTGCTGATCTATCTCGACTTGTCTCTCCTTTATGGATTATTGGATGTCCAGTGTTAAATGATAATTTTCATTGACAGTTGATGGCTCTTCTACTATTGCGCCATGCATTACCAATGACAGATACAGATGGAGATGATGAAGATCCAACTGCTTTCTTTTCGGTTAGTTGACTAGCTGTGCACTCCATCTTTATATTTCTCTTTAAAAAGATTTCTTAACGGTGGATCTAACTCATCCATCTCTGCAGCTTTTCTTACTCCGGGCAGTTGGCTTTCTTTTACCCTGCTACATCATGCTCTGGGCCATCAGCATCTTGCAGCAGCGCAGACAAAGAGAGGTAGGTGTTAGTTTTGCTAGTCCTGCATCAGTGAATTGTTTTTGAGCTAGTGTGCTGACATGACGTGCACGTCTCTATTTTGCTACAACTGATGTAAAAAACGCGTATTCATTATTTGTTCGAGCAGGAAGCTGCAGCATTGGCAGCAACACAATTTGCAGTTGTGTTACACTCTGGACAGCCGAGAAGTGTACAGTTTACCATAGCTTCAGCTGCACCAGCAACACCAGCAGCGCCTGCTTCAGTGGATAATGTTTAAACAACAAGATGATCGTGCTTGATCTCTTATTTTGAAGCTAAATACTGCCTTATGCTAGATTTGTTTGTCTGTTATCATATTTCATATATTATTATATGGGGAAGTTCGAAAATGAATTGTTGTATTACCATTTTGCCCCCCTTTACTGTTTTAAAAATTTGATTAAATATAAATATTTTTAATTATATAATGGTAGAATTTGAAGTTCTTTTAAGTCTTTCGTGAAAAGTTGAATCACCATTTTGCTTCTCTGTTAAATTGAAGTTTGATTAAATATATATATTTTATAGTATAATGGTAGAAATTGAAGTTCTTAAGCCTTATAATAATTAAAATATCATGTCAAATTATATAGTATTTTCTTTAATAGCTTGAGATTGTGATGAAAATATGATTTTGACAGTAATTCATGCCTTTCACAGGACTCATGTGCAAAGCACAATTAGTCTCACTAAAAATAGGAAGCATCAAAGATGAAAAGTTGGAATCATCATTTTACTTTTAGGCTAAATTAAACATCTAATTAATTAAATAATATTATTTTAATTATTTTTTGACTTGTAATTTATTTATTAAAAAGGAAATGCGAAAGAATAAGAGTCAATTATGATTTCTAGAATTTTAAATAAATACATAAATCAAGGTTTCCTTCTTTTAATCTTAAATTAAATAATATGAAGAGTTGTAGCTAAACCAATATATATCATTACCAATTACGAATTTGTCATCTTTATTGCACTTTAATTCTTTAGTTATTTCCTTCTAATTAAGTTTTCTTAGTTGTAAATTTGAATTACTTAATAACATTCTACTTAATAAGAAGGAGAGTTTCATCTTCTACTAATTAATGTTAAAATATTTTATCTTTCTGAAATGTATAACTATTAATTTAATTTCAATATTTTTACTTTATTCTATAAGACAAAAGAGACACTTTAAGGACGTTAATCATAAGGTAGACTAGTGTGCCTCTATATTTGTTTTTGCTACTTTATTTTGTCTTTTAAAACAAATATAAATTATAATAAGGAGATGACTAAATACAAAAGAGATTCTTCTTACGAGTTAACCATAAACATTTTTTATTAACTAAAAATTACTTGATAATTTTATATTTTTTATTTTTTTTCTTAATAGGTATAAAAAGAGCTAAAACGACAGTTTAAATAAAACGTAAATATTTTCAAACATAGACAACTCCCAAACAAACTCAAGTAATATCACTATCAAATTTAGTAATCTTGTGGCTTACATTTCATTTAAAGGTTTTTGAGGGTTAAAAAGGAGTGGTAATTTTTAAGGATATGAGAATATAGAAAAGTTGTCCATGTTATAAGATCAATTTTTATATATTCAAATATGATGTTAAAGTAGAGCAAAGCATCTTCTTTAAACACTTATATATAGATATATATTTTTTGTAAACATTCTCTTTGCAGTGTCCCACTCTTTGTTTGTTCAAATTTTAAACTTTAACAAAAGATTATTAGTGTCTTTGAGCCCACTAATTATCTAAAGCTTGTTGTTTTCTAACATTAATTTATGTCTTAAAAATCATTTGCTATTTTTATGTCCTTGTCTTGCTTAGCAGATAAGGACTCTTTTCTGTTTTGATTAGATTTCTCTTCTATTATAACACACAAAAATAACGAATTCAAAATTTGAAATTAATCAAATTACATGGGGCTATGGAGTAAATTGCATGTATATTTTATTTTGATATCGTTATTTAATTTGTATTTTTATCTTTTAAAAAAATTTCACATATAGTTACTTCCGACAACTTCAGACATAAAGTGTTTGGAGTTGATTTTGACAAAGACTAACTTTAGAGTTTAGATATACGGTCCAGGTTTCAAACGTGTGAAGTTCAAACAAAATAATTGAACTTCAGTCATACAGGCCTGACGCTCAGACAAAAATGACTAAAGTTAATTTTTGTTGCTTGAACTTCACTCATATACAACTTTAGATATTTGATATTCTCAAGTCTTACTTCGGACGCTACATATTTGAAATGGGTATATATATAAAAAAAAATTAAAAATTGGATAGACATTGAATCTCTCTTGGTTTTTAGTTGGATGTACTTCGTCATAAGTTGAATTTTCTTATTGAAAATCTTGATTTCGCCACCTGATAACCGAAAAATACTATATCTGAATTAGAATATGGATCCAATCTTCTTCTTGTCCAAATAAGTAAAAGGTTCTTAAGGGCATAGGATGAAATCATGAAAGCCTCTTCAAGATTCTCAACTTTAAGACAAGAGTATATCTAATAAGTATGCCAACCTTAATTTAGAAAATGTGCACTAGAAGCAAATTAATAGGTCCCTCCCAACACATAAATAAACCTACTTTTATTACCACTATTTGATTACGTACGAAGTTTATAAGAATATAAAAAAAAAAAGACTTTTGAAGCTATATCGAATGATGCATATTGACGAAGTAAATTGTTTCCAATCGAAAGATCCTTCATTACTAATTTTGATTAAGAATATGACTTAGTGATTAATAGATGAATGATATCAAATACTTTATAAATATAAACGTGATGCATATAAATTAATCTGAATATCATGGTTATAAAAAAAAGTTTAAATATTTCAATCATTCTATCACAATCGGTGATGTATTATACAAAAAAGCTTTATCTACTATGACAAGACAAAAGGTAAAAGTGAGCAGAGGGAACCAATGAAAGTGAAAACATGTTGTATTTGTATACATTGGAAACACAATCCATTCTCCATAACACAAGTTCATGGAGCATTAAAACATGTACTTTAGAATGTTCCAACTTTGATGAGATTTACTAATATTTTATATCGATCGAAAATAAATCTAAATTATCATTTTTTTTGTGAATTTGACATATTAACTATTGATTGAGTTTATTTTTTTATTTGAATTATCACTGTTTATATATAAAAATGCATCTTGAAGCTGATTAGGCCAACTATTATTTGTTTCCTTTTTCTATCTGAACTATCACCATCTATTCAATTAGATGTATTCTAATACATAAACAATGTCAGTTTAAGCAAGAAAAAGAGAATAACTGATAATTAAAATATGATACTCATAATTTTTGATCATTATCTTTATTTTTTACAAAATAAAATTAAAGCAATATAAAGAAAAAGTTGGTCTTCCTGGTTTAACGAGAAAAAACAAAAACAATTTCAAATTTTAAGAGAAAGTGACACTTGAATTGGTTTATCTGAATATAAGAAATTAAACTAAAAATATAAAGACTAAAAAAGAAAAGCATAAAGAAACAGATTTCGCACAAGAAACC</genome_strand>
        <mrna_strand>TTTTTTTTTTTTTTAACAAGGAAGAAAGCTTAGACCAAAAAAGTGTAGAAAACAACAAACAAACCGCAATAGTTTGGTATTTTTTTCGGAAAAATCTAAGATAAATACTATAATTTAGCAAACACCCTTCAATTTGTTCCGCTATAAATCCGCAGAAATTTTTGGGTTTTTTTCTTTCTCTTTCCATTTGCTGAATTTCTTCATTTTCCCAG.................................................................................................................................................................................................................................................................................................GAATTGTGTTACTTTTTTTATCTGGGTTTTTACAATGGGAGATTGTTTGGTGGTGCATACGGATCGTATTGTGAAGGCTAATGGAGCTGAGATTATGGATGGGAAGAATCCTGAAATGGTAGGGTCTTCGTCGGCAATAGCTGTAGATGAGAAGAAGGTGCTGGAGGAGGAGGAGGAGGAGGAGGGTGATGAGGAGGTGCCGTTAATTGGTAGAGCAGAGTGCAGGATTTGCCAGGAGGAGGATTCTTTGGACAAGTTGGAGAGCCCATGTGCTTGCAGTGGAAGTCTCAAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TACACACACCGAGCATGCGTTCAACACTGGTGCAATGAGAAGGGGGATATTACTTGTGAGATTTGCCATCAG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................CAATACCAGCCTGGTTACACTGTTCCTCCTCGACCTGTGGCTGAGGAGACAATTATTGATATTGG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGGAGGATGGCAAATCTCTGGTACCCCTTTGAATTTACATGATCCTCGCGTCTTGGCAATTGCAGAGGCTGAACGCCAACTTCTGGAAGCTGAATATGATGATTACAATTCTGCAAATGCAAGTGGTGCAGCTTTCTTTCGATCGGCTGCTTTAATT..................................................................................................................................................................................................................................................................................................................................................................................................................TTGATGGCTCTTCTACTATTGCGCCATGCATTACCAATGACAGATACAGATGGAGATGATGAAGATCCAACTGCTTTCTTTTCG......................................................................................CTTTTCTTACTCCGGGCAGTTGGCTTTCTTTTACCCTGCTACATCATGCTCTGGGCCATCAGCATCTTGCAGCAGCGCAGACAAAGAGAG...............................................................................................................................GAAGCTGCAGCATTGGCAGCAACACAATTTGCAGTTGTGTTACACTTTGGACAGCCGAGAAGTGTACAGTTTACCATAGCTTCAGTTGCACCAGCAACACCAGCAGCGCCTGCTTCAGTGGATAATGTTTAAACAACAAGATGATCGTGCTTGATCTTTTATTTTGAAGCTAAATACTGCCTTATGCTAGATTTGTTTGTCTGTTATCATATTTCATATATTATTATATGGGGAAGTTCGAAAATGAATTGTTGTATTACCATTTTGCCCCCCTTTACTGTTTTAAAAATTTGATTAAATATAAATATTTTTAATT.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTTCTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346551" ref_strand="+" ref_description="SGN-U346551        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT3G44480.1 | Symbol: None | disease resistance protein (TIR-NBS-LRR class), putative, domain signature TIR-NBS-LRR exists, suggestive of a disease resistance protein. | chr3:16101551-16107346 REVERSE | Aliases: F14L2.30 (evalue: 1e-07, score=53.9) genbank/nr: gi|48057662|gb|AAT39961.1| putative late blight resistance protein [Solanum demissum] (evalue: 2e-64, score=249)">
      <seq>gaacatgtagaatccctaccatatcttgtattcatctccgcgttgagtctcgagaaattgaaagtatcctactttatactgggctctcaacacttatcaaacatttctcagcttcggaaacttcaagaactcgaactgaattttgttgaatttgagggtgaaaaatgggaagtgagggaagacgagttcgttgaactcaaagttttgaaaatagtgaactgctccagttttagagaatggactgtctccgatgatgcattttctaaccttcaacacatgtttctgcgttgttgtcagtcacttgtggagatcccttcttggttcgcagaaattcattctctaaagtacattgaggtggataattgcaatggatctgttgttgaatcagccaggactatccaaaacacaaaagttgaagattatgatgttgatttggagctcgtcatcaagactcataattcagatggtgttactggaaggtaactgtaagctgcgtggacataaggttctatctagtatatatgttggacacaacaattatcttaattggtttaccagacacgtcgatcagtctcca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="14445" stop="13122"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="14145" g_stop="13683" g_length="463"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="463" r_length="463" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13682" i_stop="13536" i_length="147">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13535" g_stop="13422" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="464" r_stop="577" r_length="114" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U346551" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>577</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U346551" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="14145" e_stop="13683"/>
          <exon e_start="13535" e_stop="13422"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACATGTAGAATCCCTACCATATCTTGTATTCATCTCCGCGTTGAGTCTCGAGAAATTGAAAGTATCCTACTTTATACTGGGCTCTCAACACTTATCAAACATTTCTCAGCTTCGGAAACTTCAAGAACTCGAACTGAATTTTGTTGAATTTGAGGGTGAAAAATGGGAAGTGAGGGAAGACGAGTTCGTTGAACTCAAAGTTTTGAAAATAGTGAACTGCTCCAGTTTTAGAGAATGGACTGTCTCCGATGATGCATTTTCTAACCTTCAACACATGTTTCTGCGTTGTTGTCAGTCACTTGTGGAGATCCCTTCTTGGTTCGCAGAAATTCATTCTCTAAAGTACATTGAGGTGGATAATTGCAATGGATCTGTTGTTGAATCAGCCAGGACTATCCAAAACACAAAAGTTGAAGATTATGATGTTGATTTGGAGCTCGTCATCAAGACTCATAATTCAGGTACAGTATTAAGACAATACTACATTCAGTCTCATTCTTAAACTATGTTCAATGCATTTTCATAGCTATAAAAATTTGCCTCTTACTAACGTCTAACTATTACAATTTGGTTGTAATGACTACATCCACAAATTGTTGGTTTTGCAGATGGTGTTACTGGAAGGTAACTGTAAGCTGCGTGGACATAAGGTTCTATCTAGTATATATGTTGGACACAACAATTATCTTAATTGGTTTACCAGACACGTCGATCAGTCTCCA</genome_strand>
        <mrna_strand>GAACATGTAGAATCCCTACCATATCTTGTATTCATCTCCGCGTTGAGTCTCGAGAAATTGAAAGTATCCTACTTTATACTGGGCTCTCAACACTTATCAAACATTTCTCAGCTTCGGAAACTTCAAGAACTCGAACTGAATTTTGTTGAATTTGAGGGTGAAAAATGGGAAGTGAGGGAAGACGAGTTCGTTGAACTCAAAGTTTTGAAAATAGTGAACTGCTCCAGTTTTAGAGAATGGACTGTCTCCGATGATGCATTTTCTAACCTTCAACACATGTTTCTGCGTTGTTGTCAGTCACTTGTGGAGATCCCTTCTTGGTTCGCAGAAATTCATTCTCTAAAGTACATTGAGGTGGATAATTGCAATGGATCTGTTGTTGAATCAGCCAGGACTATCCAAAACACAAAAGTTGAAGATTATGATGTTGATTTGGAGCTCGTCATCAAGACTCATAATTCAG...................................................................................................................................................ATGGTGTTACTGGAAGGTAACTGTAAGCTGCGTGGACATAAGGTTCTATCTAGTATATATGTTGGACACAACAATTATCTTAATTGGTTTACCAGACACGTCGATCAGTCTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U341018" ref_strand="-" ref_description="SGN-U341018        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|1513144|gb|AAC49408.1| PRF (evalue: 1e-21, score=98.6)">
      <seq>tttagcaaacttataaagcttgaaatgctcaagatttcttctggtgancaattgacctggatcaatgatttgaacatcccaagaaacttgaagaagttgacactgtcctatttccggatagatcttaatgaagtcgcaaccctttcaaatcttgaggtactcaagctgctagaagttaccattagatccaatgtatgggaagtgaacgatgagcagttccttcgactcagaatcttgaaactagaaaatccttctttttcaagatggtatgcctcagatgatgcctttccatgccttgaacgcttggaactgaaaagatgccagcacctcaagaacatcccttattgttttgagcattcttcgtccctgaaatcgcttaagattatatcctgcaatgacatgcttgccaattcagtcatgcaaaccaaagaatcatcaaagtatttgcacggagcttctggtttcgaggtcttcatccactagtataacagtaacaactcaactctcaaattggttatcaggtgagtctcgagctatttggagctaaaccatagttaaacgagcagggaaacgaccaaaccaaggaaataaatattctgaagtgtattcaatgatctgttcatgattaactaataattggaaattattatgcgatgattggactatgaaacgatattcatagtaaaaattattatgcaatgatttgttctatgttgatcaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="25514" stop="24046"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="25214" g_stop="24694" g_length="521"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="521" r_length="521" r_score="0.994"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="24693" i_stop="24547" i_length="147">
            <donor d_prob="0.968" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="24546" g_stop="24346" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="522" r_stop="722" r_length="201" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U341018" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>722</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U341018" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="25214" e_stop="24694"/>
          <exon e_start="24546" e_stop="24346"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTAGCAAACTTAATAAGCTTGAAATGCTCAAGATTTCTTCTGGTGAACAATTGACCTGGATCAATGATTTGAACATCCCAAGAAACTTGAAGAAGTTGACACTGTCCTATTTCCGGATAGATCTTAATGAAGTCGCAACCCTTTCAAATCTTGAGGTACTCAAGCTGCTAGAAGTTACCATTAGATCCAATGTATGGGAAGTGAACGATGAGCAGTTCCTTCGACTCAGAATCTTGAAACTAGAAAATCCTTCTTTTTCAAGATGGTATGCCTCAGATGATGCCTTTCCATGCCTTGAACGCTTGGAACTGAAAAGATGCCAGCACCTCAAGAACATCCCTTATTGTTTTGAGCATTCTTCGTCCCTGAAATCGCTTAAGATTATATCCTGCAATGACATGCTTGCCAATTCAGTCATGCAAACCAAAGAATCATCAAAGTATTTGCACGGAGCTTCTGGTTTCGAGGTCTTCATCCACTAGTATAACAGTAACAACTCAACTCTCAAATTGGTTATCAGGTATGCCGTTGAACCAATGCAACTGAAGTTAAATGCTTTTCTCAAATTAATTGACTTCGTATATTCAATATTCATGACAGAATACTGGTGGTTGCACCAAACGAAGTATATTTAATTTAGTGATTCTGCTTATATTTTGATGAGCAGGTGAGTCTCGAGCTATTTGGAGCTAAACCATAGTTAAACGAGCAGGGAAACGACCAAACCAAGGAAATAAATATTCTGAAGTGTATTCAATGATCTGTTCATGATTAACTAATAATTGGAAATTATTATGCGATGATTGGACTATGAAACGATATTCATAGTAAAAATTATTATGCAATGATTTGTTCTATGTTGATCAAA</genome_strand>
        <mrna_strand>TTTAGCAAACTTATAAAGCTTGAAATGCTCAAGATTTCTTCTGGTGANCAATTGACCTGGATCAATGATTTGAACATCCCAAGAAACTTGAAGAAGTTGACACTGTCCTATTTCCGGATAGATCTTAATGAAGTCGCAACCCTTTCAAATCTTGAGGTACTCAAGCTGCTAGAAGTTACCATTAGATCCAATGTATGGGAAGTGAACGATGAGCAGTTCCTTCGACTCAGAATCTTGAAACTAGAAAATCCTTCTTTTTCAAGATGGTATGCCTCAGATGATGCCTTTCCATGCCTTGAACGCTTGGAACTGAAAAGATGCCAGCACCTCAAGAACATCCCTTATTGTTTTGAGCATTCTTCGTCCCTGAAATCGCTTAAGATTATATCCTGCAATGACATGCTTGCCAATTCAGTCATGCAAACCAAAGAATCATCAAAGTATTTGCACGGAGCTTCTGGTTTCGAGGTCTTCATCCACTAGTATAACAGTAACAACTCAACTCTCAAATTGGTTATCAG...................................................................................................................................................GTGAGTCTCGAGCTATTTGGAGCTAAACCATAGTTAAACGAGCAGGGAAACGACCAAACCAAGGAAATAAATATTCTGAAGTGTATTCAATGATCTGTTCATGATTAACTAATAATTGGAAATTATTATGCGATGATTGGACTATGAAACGATATTCATAGTAAAAATTATTATGCAATGATTTGTTCTATGTTGATCAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U330892" ref_strand="+" ref_description="SGN-U330892        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT3G46710.1 | Symbol: None | disease resistance protein (CC-NBS-LRR class), putative, domain signature CC-NBS-LRR exists, suggestive of a disease resistance protein. | chr3:17217474-17220017 REVERSE | Aliases: T6H20.260 (evalue: 2e-27, score=119) genbank/nr: gi|48057662|gb|AAT39961.1| putative late blight resistance protein [Solanum demissum] (evalue: 7e-47, score=189)">
      <seq>ttggttttagaggatgttggaagaagcatagcacaaaagtgtcaagggctgcccctatcaattgttctggtagcaggtgttcttgcaaggatgccgaaggaaagacatcgctgggaacaagtggcaaccaaattaagtgtagatattcaggctcactttgaacgtaccatggaacttagctattggtatttaccacatcatttgagaaaatgcttattatatcttgcagtattttcggagggcagagagattcaagtctcaaagttaacatggttatggatatcagaaggttttgtgaaaactcactcggagaggcttccggaggatattgcagatgattacatggagaatcttgttgagagaaacctagtgatggtttctaaaagaagttttgatggtaagatcaaggcatgtcatattcatgatctgttgcttgaattttgcaggaagaaagccgagttggagagtttcgcacagaggataaaaggggacatatttgacctttatcgaaagaccaggacttcatggcgtttttcccttcattctcggtgtgataatcttacattgtgttcgtatttctctaatctgaagtctttccaattcagggaggttagaaatactgcattctcttcgatagatcatgcatcagacatttttaaaaggttcagctttctgaaggtgttagattttga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="26673" stop="25300"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26373" g_stop="25886" g_length="488"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="488" r_length="488" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="25885" i_stop="25804" i_length="82">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="25803" g_stop="25600" g_length="204"/>
          <reference_exon_boundary r_type="cDNA" r_start="489" r_stop="692" r_length="204" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U330892" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>692</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U330892" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="26373" e_stop="25886"/>
          <exon e_start="25803" e_stop="25600"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGGTTTTAGAGGATGTTGGAAGAAGCATAGCACAAAAGTGTCAAGGGCTGCCCCTATCAATTGTTCTGGTAGCAGGTGTTCTTGCAAGGATGCCGAAGGAAAGACATCGCTGGGAACAAGTGGCAACCAAATTAAGTGTAGATATTCAGGCTCACTTTGAACGTACCATGGAACTTAGCTATTGGTATTTACCACATCATTTGAGAAAATGCTTATTATATCTTGCAGTATTTTCGGAGGGCAGAGAGATTCAAGTCTCAAAGTTAACATGGTTATGGATATCAGAAGGTTTTGTGAAAACTCACTCGGAGAGGCTTCCGGAGGATATTGCAGATGATTACATGGAGAATCTTGTTGAGAGAAACCTAGTGATGGTTTCTAAAAGAAGTTTTGATGGTAAGATCAAGGCATGTCATATTCATGATCTGTTGCTTGAATTTTGCAGGAAGAAAGCCGAGTTGGAGAGTTTCGCACAGAGGATAAAAGGGTAATTAAAACCTTTGTTGTTTTTCTTGAATCAGTCATTCTTTTGGAAATTACATTAATTATACCAATTTCTCCACTTGCAGGGACATATTTGACCTTTATCGAAAGACCAGGACTTCATGGCGTTTTTCCCTTCATTCTCGGTGTGATAATCTTACATTGTGTTCGTATTTCTCTAATCTGAAGTCTTTCCAATTCAGGGAGGTTAGAAATACTGCATTCTCTTCGATAGATCATGCATCAGACATTTTTAAAAGGTTCAGCTTTCTGAAGGTGTTAGATTTTGA</genome_strand>
        <mrna_strand>TTGGTTTTAGAGGATGTTGGAAGAAGCATAGCACAAAAGTGTCAAGGGCTGCCCCTATCAATTGTTCTGGTAGCAGGTGTTCTTGCAAGGATGCCGAAGGAAAGACATCGCTGGGAACAAGTGGCAACCAAATTAAGTGTAGATATTCAGGCTCACTTTGAACGTACCATGGAACTTAGCTATTGGTATTTACCACATCATTTGAGAAAATGCTTATTATATCTTGCAGTATTTTCGGAGGGCAGAGAGATTCAAGTCTCAAAGTTAACATGGTTATGGATATCAGAAGGTTTTGTGAAAACTCACTCGGAGAGGCTTCCGGAGGATATTGCAGATGATTACATGGAGAATCTTGTTGAGAGAAACCTAGTGATGGTTTCTAAAAGAAGTTTTGATGGTAAGATCAAGGCATGTCATATTCATGATCTGTTGCTTGAATTTTGCAGGAAGAAAGCCGAGTTGGAGAGTTTCGCACAGAGGATAAAAGG..................................................................................GGACATATTTGACCTTTATCGAAAGACCAGGACTTCATGGCGTTTTTCCCTTCATTCTCGGTGTGATAATCTTACATTGTGTTCGTATTTCTCTAATCTGAAGTCTTTCCAATTCAGGGAGGTTAGAAATACTGCATTCTCTTCGATAGATCATGCATCAGACATTTTTAAAAGGTTCAGCTTTCTGAAGGTGTTAGATTTTGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333019" ref_strand="+" ref_description="SGN-U333019        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, weak similarity to SP:P18549 Isopenicillin N epimerase (EC 5.-.- ) {Streptomyces clavuligerus} | chr5:9377405-9379021 FORWARD | Aliases: None(evalue: 1e-50, score=195) genbank/nr: gi|48057667|gb|AAT39966.1| putative isopenicillin N epimerase [Solanum demissum] (evalue: 1e-86, score=321)">
      <seq>aaatggtccatcaaccaccgcaaagaccattttcgaaacttaaagggcccccgagttctcacaccacgacctcaccatagcccgaatcaacaacggcagtttcgggtcatgcccgaaatccataatctccgctcaacaacaatggcagcttcaattccttcaacaacccgattacttctacttcaacaccttgaaaccctcgatgcttaaatcccgtgccttagtaaaatccttagtcaacgccgccgacgtcgaggaaatctccatcgtcgataacgccacaaccgccgccgcaatcgttctccaatacataacctggtctttcttcacctccgatttccgtcccggcgacgccgccgttatgctccactacgcttatggctccgttaaaagttcagttcaggcgtacgttgcacgagctggaggaaaggtaattgaggtacatttaccttttccgttgaattcgaatgaagaaattgttactgaatttgataaagctcttaaaatggggaaaatgaatgggggaaaaattagattagctgtgattgatcatattacttca</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="36253" stop="37414"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="36553" g_stop="37114" g_length="562"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="562" r_length="562" r_score="0.979"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U333019" ref_strand="+">
        <total_alignment_score>0.979</total_alignment_score>
        <cumulative_length_of_scored_exons>562</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333019" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="36553" e_stop="37114"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAATGGTCCATCAACCACCGCAAAAGCCATCACCGAAACCGAAATCGCGGCGGAGTTCTCACACCACGACCTCACCATAGCCCGAATCAACAACGGCAGTTTCGGGTCATGCCCGAAATCCATAATCTCCGCTCAACAACAATGGCAGCTTCAATTCCTTCAACAACCCGATTACTTCTACTTCAACACCTTGAAACCCTCGATGCTTAAATCCCGTGCCTTAGTAAAATCCTTAGTCAACGCCGCCGACGTCGAGGAAATCTCCATCGTCGATAACGCCACAACCGCCGCCGCAATCGTTCTCCAATACATAACCTGGTCTTTCTTCACCTCCGATTTCCGTCCCGGCGACGCCGCCGTTATGCTCCACTACGCTTATGGCTCCGTTAAAAGTTCAGTTCAGGCGTACGTTGCACGAGCTGGAGGAAAGGTAATTGAGGTACATTTACCTTTTCCGTTGAATTCGAATGAAGAAATTGTTACTGAATTTGATAAAGCTCTTAAAATGGGGAAAATGAATGGGGGAAAAATTAGATTAGCTGTGATTGATCATATTACTTCA</genome_strand>
        <mrna_strand>AAATGGTCCATCAACCACCGCAAAGACCATTTTCGAAACTTAAAGGGCCCCCGAGTTCTCACACCACGACCTCACCATAGCCCGAATCAACAACGGCAGTTTCGGGTCATGCCCGAAATCCATAATCTCCGCTCAACAACAATGGCAGCTTCAATTCCTTCAACAACCCGATTACTTCTACTTCAACACCTTGAAACCCTCGATGCTTAAATCCCGTGCCTTAGTAAAATCCTTAGTCAACGCCGCCGACGTCGAGGAAATCTCCATCGTCGATAACGCCACAACCGCCGCCGCAATCGTTCTCCAATACATAACCTGGTCTTTCTTCACCTCCGATTTCCGTCCCGGCGACGCCGCCGTTATGCTCCACTACGCTTATGGCTCCGTTAAAAGTTCAGTTCAGGCGTACGTTGCACGAGCTGGAGGAAAGGTAATTGAGGTACATTTACCTTTTCCGTTGAATTCGAATGAAGAAATTGTTACTGAATTTGATAAAGCTCTTAAAATGGGGAAAATGAATGGGGGAAAAATTAGATTAGCTGTGATTGATCATATTACTTCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U344716" ref_strand="+" ref_description="SGN-U344716        Tomato 200607 #1 [1 ESTs aligned] genbank/nr: gi|48057669|gb|AAT39968.1| hypothetical protein [Solanum demissum] (evalue: 2e-103, score=378)">
      <seq>cctattaatactatatttgtgttctctttttctttacttgtacacatgggaaaatcatgagtcccaagaaaatctttttgctcaaaagccactttaataaaaatgtttttgagtcaatttatgtgcagaacaatgacttggtttttcacttctatttggggtttcttgtgttggtttgtttccaagatttgctttttcttagagaacaggagggttgttgatgaaaatgatgaaatggactgtaaaaatcggaaaagattagattttgatgagaagggtgtggaaaaagagagttcttttttggttcagagtaagtatgagtatatatctggtaaagattcttttggttttatagagaaatcagaagctaaaagttttttagttgaagaaatgtttgtgaattttaatgaaggagaaggggttgtagaaaaagagattgataaaaattctgatgataaattgttttatttctcttttttcaaaaatggaagtgtttatcaagaaaaatcagagctttttgatgaaaaaaatgctaatgatcaagaaaagttggaatttttagatgaaaagggagataatctttgttttgaggagattttgaggaaaaatgatgaagtttttagtgatattgaaacacgggattcagaggatatgtgttatgaaattcaattgcttcctgagaatgagtctttaattcgaaattccattccagggtctgagggtcttggaaaagaattatgttcta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="56216" stop="57644"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="56514" g_stop="56722" g_length="209"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="209" r_length="209" r_score="0.976"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="56723" i_stop="56808" i_length="86">
            <donor d_prob="0.982" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="56809" g_stop="57344" g_length="536"/>
          <reference_exon_boundary r_type="cDNA" r_start="210" r_stop="745" r_length="536" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U344716" ref_strand="+">
        <total_alignment_score>0.988</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U344716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="56514" e_stop="56722"/>
          <exon e_start="56809" e_stop="57344"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTAAGAATACTATATTTGTGTTCTCTTTTTCTTTACTTGTATACATGGGAAAATCATGAGTCCCAAGAAAATCTTTTTGCTCAAAAGCCACTTTAATAAAAATGTTTTTGAGTCAATTTATGTGCAGAACAATGACTTGGTTTTTCACTTCTATTTGGGGTTTCTTGTGTTGGTTTGTTTCCAAGATTTGCTTTTTCTTAGAGAACAGGTATGATTATATGAATCTTTTTTCTTTTTTTTTGAAGTTTTAGTTTTTTATTTGCTTAAAGTTTGTATCTTTTTTGATTTTTGTAGGAGGGTTGTTGATGAAAATGATGAAATGGACTGTAAAAATCGGAAAAGATTAGATTTTGATGAGAAGGGTGTGGAAAAAGAGAGTTCTTTTTTGGTTCAGAGTAAGTATGAGTATATATCTGGTAAAGATTCTTTTGGTTTTATAGAGAAATCAGAAGCTAAAAGTTTTTTAGTTGAAGAAATGTTTGTGAATTTTAATGAAGGAGAAGGGGTTGTAGAAAAAGAGATTGATAAAAATTCTGATGATAAATTGTTTTATTTCTCTTTTTTCAAAAATGGAAGTGTTTATCAAGAAAAATCAGAGCTTTTTGATGAAAAAAATGCTAATGATCAAGAAAAGTTGGAATTTTTAGATGAAAAGGGAGATAATCTTTGTTTTGAGGAGATTTTGAGGAAAAATGATGAAGTTTTTAGTGATATTGAAACACGGGATTCAGAGGATATGTGTTATGAAATTCAATTGCTTCCTGAGAATGAGTCTTTAATTCGAAATTCGATTCGAGGGTCTGAGGGTCTTGGAGATGAATTATGTTCTA</genome_strand>
        <mrna_strand>CCTATTAATACTATATTTGTGTTCTCTTTTTCTTTACTTGTACACATGGGAAAATCATGAGTCCCAAGAAAATCTTTTTGCTCAAAAGCCACTTTAATAAAAATGTTTTTGAGTCAATTTATGTGCAGAACAATGACTTGGTTTTTCACTTCTATTTGGGGTTTCTTGTGTTGGTTTGTTTCCAAGATTTGCTTTTTCTTAGAGAACAG......................................................................................GAGGGTTGTTGATGAAAATGATGAAATGGACTGTAAAAATCGGAAAAGATTAGATTTTGATGAGAAGGGTGTGGAAAAAGAGAGTTCTTTTTTGGTTCAGAGTAAGTATGAGTATATATCTGGTAAAGATTCTTTTGGTTTTATAGAGAAATCAGAAGCTAAAAGTTTTTTAGTTGAAGAAATGTTTGTGAATTTTAATGAAGGAGAAGGGGTTGTAGAAAAAGAGATTGATAAAAATTCTGATGATAAATTGTTTTATTTCTCTTTTTTCAAAAATGGAAGTGTTTATCAAGAAAAATCAGAGCTTTTTGATGAAAAAAATGCTAATGATCAAGAAAAGTTGGAATTTTTAGATGAAAAGGGAGATAATCTTTGTTTTGAGGAGATTTTGAGGAAAAATGATGAAGTTTTTAGTGATATTGAAACACGGGATTCAGAGGATATGTGTTATGAAATTCAATTGCTTCCTGAGAATGAGTCTTTAATTCGAAATTCCATTCCAGGGTCTGAGGGTCTTGGAAAAGAATTATGTTCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U333385" ref_strand="+" ref_description="SGN-U333385        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:15946416-15949504 FORWARD | Aliases: None(evalue: 1e-07, score=53.5) genbank/nr: gi|48057669|gb|AAT39968.1| hypothetical protein [Solanum demissum] (evalue: 7e-95, score=349)">
      <seq>attcgagtcgaaaatcatgggatatcgatgattttgcttctcaaaatgttgacagagtagaggaaacagatgtgaatggtgaggaaatgaagttaatggatgatattcaagaatcaccagatcataattcgagtcgaaactcattgtacatggatggttttgcttctcaaaatgttgacggagttgaagaaacaaatgtgaactatgaggacttgaagttaatggatgattttcaagattctccgaatcataattcgagtcgaaaatcatgggatacagatggttttgcttctcaaaatgttgacagagttgaggaaacagatgtgaactatgaggaaatggatgattttcaagattctccaaatcatcattcgaatcgaaaatcatgggaaatggatggttttgcttctcaaaatgttgatatagttgaggaaacagatgtgaactatgaggaaatggatgattttcaagaatcaccagatcataattcgagtcgaaaattatgggatactgattcagattcggatgacgatgatgatatcttgttagaacatcagaatttagtcaggcaaatgaaaatggaaatgaaaaattcaagaatcacaggtctgcctactatatcagaagattatgaatctcctaaagtagtagaagatatgaagccattgaaaattgatgaaaaaatgggatacaaatattgtat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="57270" stop="58572"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57570" g_stop="58272" g_length="703"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="703" r_length="703" r_score="0.999"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U333385" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>703</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U333385" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57570" e_stop="58272"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTCGAGTCGAAAATCATGGGATATCGATGATTTTGCTTCTCAAAATGTTGACAGAGTAGAGGAAACAGATGTGAATGGTGAGGAAATGAAGTTAATGGATGATATTCAAGAATCACCAGATCATAATTCGAGTCGAAACTCATTGTACATGGATGGTTTTGCTTCTCAAAATGTTGACGGAGTTGAAGAAACAAATGTGAACTATGAGGACTTGAAGTTAATGGATGATTTTCAAGATTCTCCGAATCATAATTCGAGTCGAAAATCATGGGATACAGATGGTTTTGCTTCTCAAAATGTTGACAGAGTTGAGGAAACAGATGTGAACTATGAGGAAATGGATGATTTTCAAGATTCTCCAAATCATCATTCGAATCGAAAATCATGGGAAATGGATGGTTTTGCTTCTCAAAATGTTGATATAGTTGAGGAAACAGATGTGAACTATGAGGAAATGGATGATTTTCAAGAATCACCAGATCATAATTCGAGTCGAAAATTATGGGATACTGATTCAGATTCGGATGACGATGATGATATCTTGTTAGAACATCAGAATTTAGTCAGGCAAATGAAAATGGAAATGAAAAATTCAAGAATCACAGGTCTGCCTACTATATCAGAAGATTATGAATCTCCTAAAGTAGTAGAAGATATGAAGCCATTGAAAATTGATGAAAAAATTGGATACAAATATTGTAT</genome_strand>
        <mrna_strand>ATTCGAGTCGAAAATCATGGGATATCGATGATTTTGCTTCTCAAAATGTTGACAGAGTAGAGGAAACAGATGTGAATGGTGAGGAAATGAAGTTAATGGATGATATTCAAGAATCACCAGATCATAATTCGAGTCGAAACTCATTGTACATGGATGGTTTTGCTTCTCAAAATGTTGACGGAGTTGAAGAAACAAATGTGAACTATGAGGACTTGAAGTTAATGGATGATTTTCAAGATTCTCCGAATCATAATTCGAGTCGAAAATCATGGGATACAGATGGTTTTGCTTCTCAAAATGTTGACAGAGTTGAGGAAACAGATGTGAACTATGAGGAAATGGATGATTTTCAAGATTCTCCAAATCATCATTCGAATCGAAAATCATGGGAAATGGATGGTTTTGCTTCTCAAAATGTTGATATAGTTGAGGAAACAGATGTGAACTATGAGGAAATGGATGATTTTCAAGAATCACCAGATCATAATTCGAGTCGAAAATTATGGGATACTGATTCAGATTCGGATGACGATGATGATATCTTGTTAGAACATCAGAATTTAGTCAGGCAAATGAAAATGGAAATGAAAAATTCAAGAATCACAGGTCTGCCTACTATATCAGAAGATTATGAATCTCCTAAAGTAGTAGAAGATATGAAGCCATTGAAAATTGATGAAAAAATGGGATACAAATATTGTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U327183" ref_strand="+" ref_description="SGN-U327183        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein | chr5:15946416-15949502 FORWARD | Aliases: AT5G39780(evalue: 3e-34, score=142) genbank/nr: gi|47824937|gb|AAT38712.1| hypothetical protein PGEC446J10.16 [Solanum demissum] (evalue: 8e-82, score=306)">
      <seq>aatttcaagtacttttacaaagatttgtggaggatgagccatttcaaggaccacgagtccaatattatgtcaggaagaggtgcattctccgtagctttcttcaagtcccgagcattagaggtatgcattttttcgttgagttgttaaaatacctagactcatagtaacgagaggaatactttgactgtctagcagatgatcgttttaagggtaagaagggaggacgagaagaggaaaaggatgtcatttccataatgaaattgggcgacgttattaaggagacgatgcaagttttctgggagtttcttcgtgctgataaacgtgaagctaatttggccttaaagggtgttcaaggaactcaaatggacaatgcagaaatcgagctttttatgaatgtcaaactagaccttcaaaagaaggagaggaagttgaaagatgtacaaagaagtggcaattgcatagtgaagaagttccaaaaacaacaagaacgtcgattgagtccttcattattcgcgtcactcgtggagctaaagttggtatcaagagtgctaagtttaccaagattaaggagagatcatttggtttggtgccagaggaaactaagcaatatcaatgttgcagggagaaaagttagcatggaacaatctttttcactttttccatgttaagtattagtgattagtatatgtctagtttttcataatgctagtgaagatcttcttaggactatagttctaagctacgttgttcggactcttcaaaaatgtcaccgaatgcatgtcagattctctaaaagtagtgtatttttggagaacctgacacgggtgcgacatcaaaagtgaaagagtccgcacaacttaggttctaggctatgttagtaccccctcccccctccaaaaaaaaaaacaaaaaaagttacccctttgcttccccttgaaaaagatacctagaggaggagaaaatgtagcctgattttggaaagtcaaaaggagaataatggttaatcatntttttaatagtcttaaatatggatttataaagtggttgactgaaaagtatcaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="59393" stop="61219"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="59693" g_stop="60108" g_length="416"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="416" r_length="416" r_score="0.998"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="60109" i_stop="60283" i_length="175">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="60284" g_stop="60930" g_length="647"/>
          <reference_exon_boundary r_type="cDNA" r_start="417" r_stop="1074" r_length="658" r_score="0.924"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U327183" ref_strand="+">
        <total_alignment_score>0.953</total_alignment_score>
        <cumulative_length_of_scored_exons>1063</cumulative_length_of_scored_exons>
        <coverage percentage="0.990" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U327183" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="59693" e_stop="60108"/>
          <exon e_start="60284" e_stop="60930"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATTTCAAGTACTTTTACAAAGATTTGTCGAGGATGAGCCATTTCAAGGACCACGAGTCCAATATTATGTCAGGAAGAGGTGCATTCTCCGTAGCTTTCTTCAAGTCCCGAGCATTAGAGGTATGCATTTTTTCGTTGAGTTGTTAAAATACCTAGACTCATAGTAACGAGAGGAATACTTTGACTGTCTAGCAGATGATCGTTTTAAGGGTAAGAAGGGAGGACGAGAAGAGGAAAAGGATGTCATTTCCATAATGAAATTGGGCGACGTTATTAAGGAGACGATGCAAGTTTTCTGGGAGTTTCTTCGTGCTGATAAACGTGAAGCTAATTTGGCCTTAAAGGGTGTTCAAGGAACTCAAATGGACAATGCAGAAATCGAGCTTTTTATGAATGTCAAACTAGACCTTCAAAAGGTTAGTCTAATCTTTACCTCATAGATACGCCACACGCCTTTCACTACTTAAAAAAAAAAAAAAAACTTAGCAACATTTCGTAGCTACAACAACAACATGTTGACGAAGTTCATAGCCAATTCCAGTTCTTTTGGTTTCTAAACTTTGTGAATCACTTGATATTCTCTATATGCAGAAGGAGAGGAAGTTGAAAGATGTACAAAGAAGTGGCAATTGCATAGTGAAGAAGTTCCAAAAACAACAAGAACGTCGATTGAGTCCTTCATTATTCGCGTCACTCGTGGAGCTAAAGTTGGTATCAAGAGTGCTAAGTTTACCAAGATTAAGGAGAGATCATTTGGTTTGGTGCCAGAGGAAACTAAGCAATATCAATGTTGCAGGGAGAAAAGTTAGCATGGAACAATCTTTTTCACTTTTTCCATGTTAAGTATTAGTGATTAGTATATGTCTAGTTTTTCATAATGCTAGTGAAGATCTTCTTAGGACTATAGTTCTAAGCTACGTTGTTCGGACTCTTCAAAAATGTCACCGAATGCATGTCAGATTCTCTAAAAGTAGTGTATTTTTGGAGAACCTGACACGGGTGCGACATCAAAAGTGAAAGAGTCCGCACAACTTAGGTTCTAGGCTATGTTAGTA-----------C-CCAAAAAAAAAAA-AAAAAAACTTGCACCTTTGCTTCCCCTTGAAAAAAGATACCTAGAGGAGGAGAATATGTAGCCTGATTTTGGAAAGGCAAATTTAGAATAATGGTTAATCATGTTTTTGAATAGTAGTAAA-ATAGATTTATAAAGTGGTTGACTTGAAAAGTATCAAATGTTAGAAAAG</genome_strand>
        <mrna_strand>AATTTCAAGTACTTTTACAAAGATTTGTGGAGGATGAGCCATTTCAAGGACCACGAGTCCAATATTATGTCAGGAAGAGGTGCATTCTCCGTAGCTTTCTTCAAGTCCCGAGCATTAGAGGTATGCATTTTTTCGTTGAGTTGTTAAAATACCTAGACTCATAGTAACGAGAGGAATACTTTGACTGTCTAGCAGATGATCGTTTTAAGGGTAAGAAGGGAGGACGAGAAGAGGAAAAGGATGTCATTTCCATAATGAAATTGGGCGACGTTATTAAGGAGACGATGCAAGTTTTCTGGGAGTTTCTTCGTGCTGATAAACGTGAAGCTAATTTGGCCTTAAAGGGTGTTCAAGGAACTCAAATGGACAATGCAGAAATCGAGCTTTTTATGAATGTCAAACTAGACCTTCAAAAG...............................................................................................................................................................................AAGGAGAGGAAGTTGAAAGATGTACAAAGAAGTGGCAATTGCATAGTGAAGAAGTTCCAAAAACAACAAGAACGTCGATTGAGTCCTTCATTATTCGCGTCACTCGTGGAGCTAAAGTTGGTATCAAGAGTGCTAAGTTTACCAAGATTAAGGAGAGATCATTTGGTTTGGTGCCAGAGGAAACTAAGCAATATCAATGTTGCAGGGAGAAAAGTTAGCATGGAACAATCTTTTTCACTTTTTCCATGTTAAGTATTAGTGATTAGTATATGTCTAGTTTTTCATAATGCTAGTGAAGATCTTCTTAGGACTATAGTTCTAAGCTACGTTGTTCGGACTCTTCAAAAATGTCACCGAATGCATGTCAGATTCTCTAAAAGTAGTGTATTTTTGGAGAACCTGACACGGGTGCGACATCAAAAGTGAAAGAGTCCGCACAACTTAGGTTCTAGGCTATGTTAGTACCCCCTCCCCCCTCCAAAAAAAAAAACAAAAAAAGTTACCCCTTTGCTTCCCCTTG-AAAAAGATACCTAGAGGAGGAGAAAATGTAGCCTGATTTTGGAAAGTCAAAAGGAGAATAATGGTTAATCATNTTTTT-AATAGTCTTAAATATGGATTTATAAAGTGGTTGAC-TGAAAAGTATCAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328419" ref_strand="+" ref_description="SGN-U328419        Tomato 200607 #1 [3 ESTs aligned]">
      <seq>taggttatctttgtgactcctgataacatgatttaactatatgacatcttatttaacatgcagtttttcaatatagagaaatggatgaagttatccctctattgtgcaaaatatactcattttactttatcctttatattttggtgccatcatacccttgccgttgagctctagcatagacagagtgcattccacttccacctttgaaattactttggtataaaggttgaaatttcgcctctatacttgctattgttttaaaataccctctattatacttcaagttggaacctaataggctgcaaatccgagacaatttgcttgcacaagtgtatgataacctcatcaagctgtgcctgattatcaatgttatacaaaaaagtgtatgagtcccaagtataacaaagggtaaagcgtttttggtcaacttccctttattaaatgtattatgcctaaatgcatctcaatttatttttatgtacttctacaatatcatcagtgtaacattttctaatggtttgaggcagattacttcctcatcaactaacagatgttctctgtagctatcagtgcatctcaaaaaaaaaatttcatgtacctagaatattatcagtgtaacat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="64842" stop="66062"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65142" g_stop="65762" g_length="621"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="621" r_length="621" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U328419" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>621</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U328419" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65142" e_stop="65762"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TAGGTTATCTTTGTGACTCCTGATAACATGATTTAACTATATGACATCTTATTTAACATGCAGTTTTTCAATATAGAGAAATGGATGAAGTTATCCCTCTATTGTGCAAAATATACTCATTTTACTTTATCCTTTATATTTTGGTGCCATCATACCCTTGCCGTTGAGCTCTAGCATAGACAGAGTGCATTCCACTTCCACCTTTGAAATTACTTTGGTATAAAGGTTGAAATTTCGCCTCTATACTTGCTATTGTTTTAAAATACCCTCTATTATACTTCAAGTTGGAACCTAATAGGCTGCAAATCCGAGACAATTTGCTTGCACAAGTGTATGATAACCTCATCAAGCTGTGCCTGATTATCAATGTTATACAAAAAAGTGTATGAGTCCCAAGTATAACAAAGGGTAAAGCGTTTTTGGTCAACTTCCCTTTATTAAATGTATTATGCCTAAATGCATCTCAATTTATTTTTATGTACTTCTACAATATCATCAGTGTAACATTTTCTAATGGTTTGAGGCAGATTACTTCCTCATCAACTAACAGATGTTCTCTGTAGCTATCAGTGCATCTCAAAAAAAAAATTTCATGTACCTAGAATATTATCAGTGTAACAT</genome_strand>
        <mrna_strand>TAGGTTATCTTTGTGACTCCTGATAACATGATTTAACTATATGACATCTTATTTAACATGCAGTTTTTCAATATAGAGAAATGGATGAAGTTATCCCTCTATTGTGCAAAATATACTCATTTTACTTTATCCTTTATATTTTGGTGCCATCATACCCTTGCCGTTGAGCTCTAGCATAGACAGAGTGCATTCCACTTCCACCTTTGAAATTACTTTGGTATAAAGGTTGAAATTTCGCCTCTATACTTGCTATTGTTTTAAAATACCCTCTATTATACTTCAAGTTGGAACCTAATAGGCTGCAAATCCGAGACAATTTGCTTGCACAAGTGTATGATAACCTCATCAAGCTGTGCCTGATTATCAATGTTATACAAAAAAGTGTATGAGTCCCAAGTATAACAAAGGGTAAAGCGTTTTTGGTCAACTTCCCTTTATTAAATGTATTATGCCTAAATGCATCTCAATTTATTTTTATGTACTTCTACAATATCATCAGTGTAACATTTTCTAATGGTTTGAGGCAGATTACTTCCTCATCAACTAACAGATGTTCTCTGTAGCTATCAGTGCATCTCAAAAAAAAAATTTCATGTACCTAGAATATTATCAGTGTAACAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U312651" ref_strand="+" ref_description="SGN-U312651        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | 60S ribosomal protein L34 (RPL34A), identical to GB:Q42351, location of EST 105E2T7, gb:T22624 | chr1:9315370-9316716 REVERSE | Aliases: T2P11.7, T2P11_7(evalue: 2e-14, score=75.5) genbank/nr: gi|53689756|gb|AAU89767.1| hypothetical protein [Solanum tuberosum] (evalue: 1e-12, score=75.9)">
      <seq>tttcaatggcttaaagacttctctttttgcagattccacacttgagacctgctgagtacaagagatccaggttatctaggaacaggaggactgtgaaccgtgcttatggtggtgtgttgtccggcagtgctgtacgtgaaaggtatagttttggtccactagagtgttctcaaaccgtttaaacaaaattagtgttcttccaactcactagatgttttcttgtacaacaggatcatcagagcctttttggttgaagaacaaaagatcgtgaagaaggttttgaagatccagaaagccaaggaaaagctagcatccaagagctaagccttgaatcctcgatgatgtcgtgagaggagtttctgatactgcaggtttctaggaaatcatgactgtattttgatttttggtcttgagatttgtatgttgctggtttttcgttaaaatacgatattggaggtctttcttcagtttgtcgaaatatccgttctcctaggtatctctattttcttgttctgaatatttaaacttgttatggatatttgcaacttctattcaattaggctattcgttccagttttgattcttaaatcagtttatacttgaatctgagtttgttttataaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="65596" stop="66819"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="65896" g_stop="66519" g_length="624"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="623" r_length="623" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U312651" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>624</cumulative_length_of_scored_exons>
        <coverage percentage="1.002" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U312651" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="65896" e_stop="66519"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTCAATGGCTTAAAGACTTCTCTTTTTGCAGATTCCACACTTGAGACCTGCTGAGTACAAGAGATCCAGGTTATCTAGGAACAGGAGGACTGTGAACCGTGCTTATGGTGGTGTGTTGTCCGGCAGTGCTGTACGTGAAAGGTATAGTTTTGGTCCACTAGAGTGTTCTCAAACCGTTTAAACAAAATTAGTGTTCTTCCAACTCACTAGATGTTTTCTTGTACAACAGGATCATCAGAGCCTTTTTGGTTGAAGAACAAAAGATCGTGAAGAAGGTTTTGAAGATCCAGAAAGCCAAGGAAAAGCTAGCATCCAAGAGCTAAGCCTTGAATCCTCGATGATGTCGTGAGAGGAGTTTCTGATACTGCAGGTTTCTAGGAAATCATGACTGTATTTTGATTTTTGGTCTTGAGATTTGTATGTTGCTGGTTTTTCGTTAAAATACGATATTGGAGGTCTTTCTTCAGTTTGTCGAAATATCCGTTCTCCTAGGTATCTCTATTTTCTTGTTCTGAATATTTAAACTTGTTATGGATATTTGCAACTTCTATTCAATTAGGCTATTCGTTCCAGTTTTGATTCTTAAATCAGTTTATACTTGAATCTGAGTTTGTTTTGATACA</genome_strand>
        <mrna_strand>TTTCAATGGCTTAAAGACTTCTCTTTTTGCAGATTCCACACTTGAGACCTGCTGAGTACAAGAGATCCAGGTTATCTAGGAACAGGAGGACTGTGAACCGTGCTTATGGTGGTGTGTTGTCCGGCAGTGCTGTACGTGAAAGGTATAGTTTTGGTCCACTAGAGTGTTCTCAAACCGTTTAAACAAAATTAGTGTTCTTCCAACTCACTAGATGTTTTCTTGTACAACAGGATCATCAGAGCCTTTTTGGTTGAAGAACAAAAGATCGTGAAGAAGGTTTTGAAGATCCAGAAAGCCAAGGAAAAGCTAGCATCCAAGAGCTAAGCCTTGAATCCTCGATGATGTCGTGAGAGGAGTTTCTGATACTGCAGGTTTCTAGGAAATCATGACTGTATTTTGATTTTTGGTCTTGAGATTTGTATGTTGCTGGTTTTTCGTTAAAATACGATATTGGAGGTCTTTCTTCAGTTTGTCGAAATATCCGTTCTCCTAGGTATCTCTATTTTCTTGTTCTGAATATTTAAACTTGTTATGGATATTTGCAACTTCTATTCAATTAGGCTATTCGTTCCAGTTTTGATTCTTAAATCAGTTTATACTTGAATCTGAGTTTGTTTT-ATAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318772" ref_strand="+" ref_description="SGN-U318772        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | RNA-dependent RNA polymerase, putative, similar to RNA-directed RNA polymerase GB:CAA09697 GI:4138282 (Nicotiana tabacum) | chr1:5093409-5098027 REVERSE | Aliases: F10B6.19, F10B6_19(evalue: 0, score=746) genbank/nr: gi|4038592|emb|CAA71421.1| RNA-directed RNA polymerase [Lycopersicon esculentum] (evalue: 0, score=1315)">
      <seq>gaaatattctttacttacttcaccagggattgactcatcactcccctcaagtctttgtgtgttgtgataataaatttggttgtgcttcagtttcagtcactactgctgggtagtttttattttgcataacttcagggggtattccagttggtgttagcatttgaaagtcgaactgcacttggaatttggctacatgggaaagacaattcaggttttcggattcccttatcttctctctgcggaagtggttaagtcattcttagagaaatatacaggatatggaactgtatgtgcattggaggttaaacagtccaaaggaggatctagagcatttgccaaagttcaatttgccgacaacataagtgctgacaaaatcatcactttggctaataacaggctgtattttggctcttcttatttgaaggcttgggaaatgaaaactgatattgtccaactgcgggcatatgtggatcagatggatggcataactttgaatttcggatgtcagatatcagatgacaagtttgcagtgttgggaagtacagaagtttcaattcaatttggcattggattgaagaaattttttttctttttatctagtggttcagctgactataaacttcagctttcatatgaaaatatatggcaggttgtgctccatcgtccatatggtcaaaatgctcagtttctcctcatacagttatttggtgctcctcggatctataagagacttgaaaactcctgttatagcttctttaaggaaactcctgatgatcagtgggtgaggacaacagatttccctccatcttggatagggctatcttctagcttatgtttgcagttccgtaggggtgttcgtcttccaaatttcgaggaaagttttttccactatgcagaacgtgaaaacaatattactttacagactggtttcacctttttcgtctctcaaaaatcggctctggttcccaatgtccagcctccggaaggaatttcaattccctacaagattttgttcaaaattagttctttggtacagcatggatgcatacctgggccagcattaaatgtctactttttccgattagttgatcctcgaaggagaaatgtggcatgcattgagcatgccttagagaaactgtactatataaaggagtgctgttatgatccggtgaggtggctcactgagcagtatgatgggtatctcaagggtagacaacctccaaaatctccgtccatcactttagatgatgggttggtgtatgtaagaagggtcctagtaacaccatgcaaagtttatttttgtggtccagaggttaatgtttccaatcgggttctccgcaattattctgaagacatagataactttcttcgtgtttcttttgttgatgaggagtgggagaaactgtattctacagacttattaccaaaagcaagtactggaagtggtgtcaggacaaacatctatgagaggatcttatcaactctgcggaaaggctttgtaattggtgataaaaaatttgaatttcttgcattttcatcgagccagttgcgggataattcagtgtggatgtttgcatcaagacctggccttactgcaaatgatataagagcttggatgggtgatttttcgcagatcaagaatgtcgcaaaatatgctgccagacttggtcaatcttttggttcctccagagagactttgagtgttcttaggcatgagattgaagttattcccgatgtaaaggttcatggaaccagctatgtcttttctgatggaattggtaaaatatctggtgactttgctcatagagttgcctcaaaatgtggccttcaatataccccatctgctttccagattcgttatggtggatataaaggtgttgtgggtgttgatccggattcatcaatgaagttgtctttgagaaagagcatgtcgaaatatgaatcagacaacataaagttagatgtccttggatggagcaaatatcagccttgttatcttaatcgtcaactgattacgctcttgtctacacttggagtgaaagatgaagttctcgaacagaagcaaaaggaagctgtagatcagcttgatgctatcttgcatgattctttgaaggcacaggaggctttggaattgatgtctcctggagagaacactaatattctcaaggcaatgctaaactgtggttataagcctgatgctgagccctttctttcaatgatgttgcaaaccttccgcgccatccaagttgctcgatttgcggactagatcaagaatatttattccaaatggaagaacaatgatgggatgtttggatgaatccagaaccttggaatatggtcaggtgtttgttcagtttactggtgctggacatggagagttttctgacgatttacatccatttaataacagcagatccaccaacagtaatttcattctgaagggaaatgtggttgttgcaaaaaatccatgcttgcatcctggtgatattcgtgttttaaaggctgtaaatgttcgagcgctgcaccacatggtagattgtgttgtattccctcagaaaggaaaaagacctcatccgaatgaatgttctgggagtgatttggatggggatatctactttgtttgctgggatcaagacatgatcccgccaaggcaagtccagccgatggaatatcctccagcacccagcatacagttggaccatgatgtcacaattgaggaagttgaagagtacttcaccaactatattgtgaatgacagtttgggaatcatagcaaatgcccatgtcgtatttgcagacagagaacctgatatggccatgagtgatccatgcaaaaaacttgctgagctcttttcaattgcagtggactttccaaagactggtgttcccgctgaaataccatctcagttgcgccctaaagaatacccagacttcatggataagccggacaagaccagctatatctcagaaagagttattggaaagcttttcaggaaagtgaaggacaaagcacctcaggctagctctatcgcgaccttcacaagagatgttgcaaggagatcatatgatgctgatatggaagttgatggatttgaagattacattgacgaagcttttgactacaaaactgaatatgacaacaagctgggtaatttaatggactactatggcataaaaacagaggctgaaatacttagtggtggcattatgaaggcatcaaaaacttttgaccgcagaaaagatgctgaggccattagtgttgctgtgagggccttgaggaaggaggcaagagcctggttcaagaggcgtaatgatatagatgacatgttaccaaaggcttcggcttggtaccacgttacatatcatcctacatattggggttgctacaatcaggggttgaaaagagctcatttcattagctttccctggtgtgtttatgaccagctaatccagattaagaaggacaaagcacgtaacaggccagttctcaacttgtcatctctcagggctcaactgagtcacagattagtgttgaaatgagattccagtcgagcgttaagctgatatatatataatgtaatagggtgtgatcataagaaaactgttatgcattgttgactaccttttgtctttaaaactgcatgaagctgcaacatatatgcagtactctaagaaacagatgtacagctaagtactaatatgtatgtgatttgagtttcatctttcttctaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="95726" stop="105149"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="96026" g_stop="96153" g_length="128"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="128" r_length="128" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="96154" i_stop="97442" i_length="1289">
            <donor d_prob="0.754" d_score="1.00"/>
            <acceptor a_prob="0.982" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="97443" g_stop="98014" g_length="572"/>
          <reference_exon_boundary r_type="cDNA" r_start="129" r_stop="700" r_length="572" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="98015" i_stop="100712" i_length="2698">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.884" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="100713" g_stop="102577" g_length="1865"/>
          <reference_exon_boundary r_type="cDNA" r_start="701" r_stop="2566" r_length="1866" r_score="0.998"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="102578" i_stop="103212" i_length="635">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="103213" g_stop="103363" g_length="151"/>
          <reference_exon_boundary r_type="cDNA" r_start="2567" r_stop="2717" r_length="151" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="103364" i_stop="103832" i_length="469">
            <donor d_prob="0.983" d_score="1.00"/>
            <acceptor a_prob="0.888" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="103833" g_stop="104854" g_length="1022"/>
          <reference_exon_boundary r_type="cDNA" r_start="2718" r_stop="3739" r_length="1022" r_score="0.994"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U318772" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>3738</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318772" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="96026" e_stop="96153"/>
          <exon e_start="97443" e_stop="98014"/>
          <exon e_start="100713" e_stop="102577"/>
          <exon e_start="103213" e_stop="103363"/>
          <exon e_start="103833" e_stop="104854"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAATATTCTTTACTTACTTCACCAGGGATTGACTCATCACTCCCCTCAAGTCTTTGTGTGTTGTGATAATAAATTTGGTTGTGCTTCAGTTTCAGTCACTACTGCTGGGTAGTTTTTATTTTGCATAGTAAGTTACTTTCTCAAAGCCCCATGTGAAATTTTGCTTTGATTCAGTTTATTTTGTGTTGTTTATGTGTTTGAGGCTGTTGCGTAGCTGTTTTCTTGGTTTGTGTGTTCTATTGTTGTTTAAAGTTTGGATCTTTTTCATTGTTTTGTGAGTCTGACTGAATGTATATGATCGTGGGTGGTGAAATTTCTGTAAAATTCCTGATGGAAAGAATGTTTTAACTAATGTTACTAGTATGTTATTTGTTGATCATTAGCTTTAGAAGAAGCAGAACGAAAAGTTCACTTTAAAGAAGAAAAAAAAAAGAGACTTTGTCATCTGTGCAAAAAGCTGTATAAAAGAGAGTGTAAAACCTTTAGATATGGCTTGAGGTAGTAGTAATTTGCTAGACTGGTTAAAGTCAAGAAACCCTATTTAGCTAGATGATTGACTTAAATTGGGGTTGAGTTAGGTTCAAGTGTTTGTATCTTTACATGATAGATATCAGTGTTAGGTTCATCTTATTTGGGGTCCCATGTGAGCTCTTGTTGGGGAATGGATTGGTGATCATATCTTACCTGGTATCTGAGTTAGGTCCATCATGTTTAGGCTCCCGATGCATACTACAATTGGGCTTGCGCACAAAAGGATGTTAGAGTGGGACCCACATTGGTTGGAAATTCATTGGTGGTTGGTTTGTATGGACTTGGACAATCTTTTCCTTGTGAGTTAATCTTTTGGAGTTGAGTTAGGCCTAAGTGTCATATCTTAATAGGCCAAAAAATCTCAAATGTGTACATCAATTAGGTTGATTTCTCTTTTGATTCGTCTTGCTGTATTTAGTGGTCAAAAAGCCTACATTTTTCATGTCTCAGACGTCTGGAAAATGTATCAAATGGGTATCTAGTAGTTTGCTGTATTCCTTTATATAGTTAGTCATAATTTTGCGTAACTTTGTGGAGTCTAGTTTTCAGCACCTTAGAGTGAGCATACTTTTAGATATCTTGCTTATGCAGCAGTTTAGTTGCTCACATATTCGACAGATGTGAAGCTCTGGGTTGTCCTCTAGTGAAGGTATGGGGAGAGCACAAAAAATAAATAGTTCAATGATCTTGCTTTTAAGTTCAATGGGTATGTGTGAAATATTGAGGATGCAGCTAAATTTGAATTGCATAGCATGTAGGATTCTCCTTTACCTAGTAACTTTTGGCTCTTCTTTTACCTAATATGGTGACACTTGTACCTTAATCTTGTAATTTCATTCCTTCGTTCTTTACAATTATTCTTACTTGTGTTACATCTGTATGTAGACTTCAGGGGGTATTCCAGTTGGTGTTAGCATTTGAAAGTCGAACTGCACTTGGAATTTGGCTACATGGGAAAGACAATTCAGGTTTTCGGATTCCCTTATCTTCTCTCTGCGGAAGTGGTTAAGTCATTCTTAGAGAAATATACAGGATATGGAACTGTATGTGCATTGGAGGTTAAACAGTCCAAAGGAGGATCTAGAGCATTTGCCAAAGTTCAATTTGCCGACAACATAAGTGCTGACAAAATCATCACTTTGGCTAATAACAGGCTGTATTTTGGCTCTTCTTATTTGAAGGCTTGGGAAATGAAAACTGATATTGTCCAACTGCGGGCATATGTGGATCAGATGGATGGCATAACTTTGAATTTCGGATGTCAGATATCAGATGACAAGTTTGCAGTGTTGGGAAGTACAGAAGTTTCAATTCAATTTGGCATTGGATTGAAGAAATTTTTTTTCTTTTTATCTAGTGGTTCAGCTGACTATAAACTTCAGCTTTCATATGAAAATATATGGCAGGTTGTGCTCCATCGTCCATATGGTCAAAATGCTCAGTTTCTCCTCATACAGGTTTTTCAATTATTCCAAACCTTAACTTTTGTTTTCATCCTTCTCCCTGTGCCTGGTCTTTGTGAATATTGTGACTATTTGATTATTGGTTGAATGCTACACAATTCTCATGTATTGGGTCTCTTACTGTTTGTTGATCCACTTCTTTTGAAGCAAAATCATTTCTGCTAAGATATATTTATTTGTTGACTTCTGAACCAAATGGAAGGGGTTGAAATCCTATTTATGAGAATTTTGATCATAAATTCCATTTCTAGAAACTGAACATGCATGAAGGCTTGAACCGACATTAAACTGGAAACTTACTAGCTACAGATCATGAAGCAAAGAAGCTTTAGAAATTACAAAGTACAAGCTCATAAGCATTAATAGCGGTTAGGCCCTCCCCGATATTGTTCTGCTTAAAGTCTTTTAAGGTTGGATGCTTGTGCGTTTATAAGCACTGCTATGTGGATAACCTAGCATCCTGTCCTAAATCCTAACTAACATGCCAGATTACCATATTCTCAGCCTATGTTTTGATGTGTCAACATCCTTTTCGTTTATAAGAATATCTGTTGACATCCTTAAAGCTGAATGTTTGAAATTCTTAACCTCTTTCATGAATATTTGCACTAGAACTTTTTTTTATCTAGTAAAATACCATGAAATGGTACTGTCAACATCCAGATTTTTGAGGAAAATGTCTTTCATTTTTTTGAGCAGATTTTTCCATCAAAGTTATAAAATGTTGATTTTCTGTTTTTTTTTTTTTGGTAAAGTAATTAAATTGTGTTGATTTTCTGTTAATATGCACTCCTATTTTAAATTTAGAAATTACTATTTCTACTGTTAATTTGAGAGAGACAGAAGAGCTTCTTGTCGTCCTGTCTACCAAACAAACGTATAATTTTGGAATTTTCCTTTTGAGTTCGCTATTTTCTTATTGCACTTCACGTAGCCGCGATAGATATCAGACGGAAGAAACAAACTAGGCTGTGCATTGAGACAAAATCATGTGCTTTTATTTTATCTGGTTAGCTTAGGAAGGTGTTTTCTGTACTTGTGTATTCATTGTCTTTTCTCATTGGTGGATATAGATGGCTTACTGTAGCTTCTTTTTTAAAAAAAATTGATGTGCTGACTGTTTTATCCTCTTTAGTTTGCAGTATTTGTAACTTAGTTGCTTTGAAATATTGCCACATAGCATTAGCTGCATCACGACACAGAATGCTGTAACCTTATACGATTGATGAATCACAAACGAAAGCAGTCACTGCTCATAACCCTAAAAGAGTCTACTACGTCTGTTAATTTAGTTGTCTGTAATGTGCTTTCATCATCACACCTTACTGTCCAAATTTACCATCTTGTGTTCTTTTAGTGTTTGATCAGTACATGGAGTTTAGCTTTACAAGTAAAGTTATTTTTCAAAAATTGGTGGTTAGATTGATCATTGAATAATATTTCTTTCTTAAAAGTCTGTTCAATTGTTCATTAAATAATCTTTCTCAAAAAGGCCGTTCAGTTATTCATTCAATAATCTTTCTCAAAAAGACTCTTCGCTAAATAATTAGGGAATCTCTAGGTATATTGTAAGATGAACATCAATATTGCTCTTCGTTGTCCGTTCAATAATTACAGAATTTCTGTAAAAATTAATATTAAGATGGTTCTTCTTATCCTCATCATCCTTTCTCTCTTTGCTCCCTAATCAGGAGTTTGTAATGGGTGAAAATATGTTATTTTTATCCTGAAAATCCATTCCAGTACCTTATTGGAGCTTTTTGTTTATACATGATGTATTGCTTATCTCTATATTTTAGGGGAATGGTTATACATCTTTAAAATTGTAATTTATTTATTTATTTTAATGCCTTCTTTCAGTTTACAAGTTACTAAATAGTTTCAGTTATTTTTGGGGATATTTGGTAGTTGAGACATTTTAATAGTGTGCTATTCTCATATTTTTTTTCATTTGTGAGTAATTTATGATCTGCCTGTCCTTGAGACACCTATTTTAAAGTATCACATTGTTTCTAATAAGTCTTTTAACAGGCATGTGCACTGTTTATCATGTAAAAATACTGGAAAATTACTAGGTGGAAAATGTGTGCATCATAGACTAGAGCCATTTGGATTTTGGATAGCCCTTGTCTGTTTAATTATATTATGTGCTTAGTTTCGGTTAAAGAAGAAAAGTTGAAAATGGTTAAAGAACATTTGTCAGCTTTTCAAATTTCTAACCTTGGTGTCCAGGTTAGCTTGTGTGCACCTCAACAAAGTCCATGGGTACCTGATATATCCTACCCACGACCAACACAGATCCGAGTTAACAATTTCTTTTTAACAACTAAAAATTCATGATGATAAGAAAAAACGTGTTTAGTAAAGATGATAAACTTGGGCCTGTGCTCTACACAGGCTTGGTACCGCTGGTTAATTAAATAAACCAAGCTTCTAACTTGCATATTTATATTAGTTAACAAATATAAGTCCACATTTTTCAACTTCTTCAATACTTGTACTTGTCTGCTCGTGATCTTTTAAAAACGTGAAAGCAACTCTTCTACTGTGTTTGCAGAATGTCCTCACGAGTATAGTTGCATCAGTTAATACATTCCTTCATATAATTAAATTCTGTTTAGATCAGTAGTCTACTTTGCTGATTTATGATAAGATTCAGTATTGATTTATTCATTCGATTTCTATGATTTAGTTATTTGGTGCTCCTCGGATCTATAAGAGACTTGAAAACTCCTGTTATAGCTTCTTTAAGGAAACTCCTGATGATCAGTGGGTGAGGACAACAGATTTCCCTCCATCTTGGATAGGGCTATCTTCTAGCTTATGTTTGCAGTTCCGTAGGGGTGTTCGTCTTCCAAATTTCGAGGAAAGTTTTTTCCACTATGCAGAACGTGAAAACAATATTACTTTACAGACTGGTTTCACCTTTTTCGTCTCTCAAAAATCGGCTCTGGTTCCCAATGTCCAGCCTCCGGAAGGAATTTCAATTCCCTACAAGATTTTGTTCAAAATTAGTTCTTTGGTACAGCATGGATGCATACCTGGGCCAGCATTAAATGTCTACTTTTTCCGATTAGTTGATCCTCGAAGGAGAAATGTGGCATGCATTGAGCATGCCTTAGAGAAACTGTACTATATAAAGGAGTGCTGTTATGATCCGGTGAGGTGGCTCACTGAGCAGTATGATGGGTATCTCAAGGGTAGACAACCTCCAAAATCTCCGTCCATCACTTTAGATGATGGGTTGGTGTATGTAAGAAGGGTCCTAGTAACACCATGCAAAGTTTATTTTTGTGGTCCAGAGGTTAATGTTTCCAATCGGGTTCTCCGCAATTATTCTGAAGACATAGATAACTTTCTTCGTGTTTCTTTTGTTGATGAGGAGTGGGAGAAACTGTATTCTACAGACTTATTACCAAAAGCAAGTACTGGAAGTGGTGTCAGGACAAACATCTATGAGAGGATCTTATCAACTCTGCGGAAAGGCTTTGTAATTGGTGATAAAAAATTTGAATTTCTTGCATTTTCATCGAGCCAGTTGCGGGATAATTCAGTGTGGATGTTTGCATCAAGACCTGGCCTTACTGCAAATGATATAAGAGCTTGGATGGGTGATTTTTCGCAGATCAAGAATGTCGCAAAATATGCTGCCAGACTTGGTCAATCTTTTGGTTCCTCCAGAGAGACTTTGAGTGTTCTTAGGCATGAGATTGAAGTTATTCCCGATGTAAAGGTTCATGGAACCAGCTATGTCTTTTCTGATGGAATTGGTAAAATATCTGGTGACTTTGCTCATAGAGTTGCCTCAAAATGTGGCCTTCAATATACCCCATCTGCTTTCCAGATTCGTTATGGTGGATATAAAGGTGTTGTGGGTGTTGATCCGGATTCATCAATGAAGTTGTCTTTGAGAAAGAGCATGTCGAAATATGAATCAGACAACATAAAGTTAGATGTCCTTGGATGGAGCAAATATCAGCCTTGTTATCTTAATCGTCAACTGATTACTCTCTTGTCTACACTTGGAGTGAAAGATGAAGTTCTCGAACAGAAGCAAAAGGAAGCTGTAGATCAGCTTGATGCTATCTTGCATGATTCTTTGAAGGCACAGGAGGCTTTGGAATTGATGTCTCCTGGAGAGAACACTAATATTCTCAAGGCAATGCTAAACTGTGGTTATAAGCCTGATGCTGAGCCCTTTCTTTCAATGATGTTGCAAACCTTCCGCG-CATCCAAGTTGCTCGATTTGCGGACTAGATCAAGAATATTTATTCCAAATGGAAGAACAATGATGGGATGTTTGGATGAATCCAGAACCTTGGAATATGGTCAGGTGTTTGTTCAGTTTACTGGTGCTGGACATGGAGAGTTTTCTGACGATTTACATCCATTTAATAACAGCAGATCCACCAACAGTAATTTCATTCTGAAGGGAAATGTGGTTGTTGCAAAAAATCCATGCTTGCATCCTGGTGATATTCGTGTTTTAAAGGCTGTAAATGTTCGAGCGCTGCACCACATGGTAGATTGTGTTGTATTCCCTCAGAAAGGAAAAAGGTAAATTTTACGTTGGAAACCTATTAACTGTTTACTTGTAAGTTTATAGAAGGCTTAACCATTTCTTGCCTGGTCTTTTACTAATGCTCTAATCCAAATTAGTTTCAAAGATAGTCAAATTGATTCTCGGGAAGCAAAAAGCGACAGAGGGAGTAATTGACTGTCTTTCCTTAATTAGTTAAGATTCACTTGTATAATATCCCCTTCTCATGAGTCATGAGATGTAAAGGCATATTGAAATACAAAGAAGTCTTTTCTTCCTTCCCATATTCTACACTAACTTATGGGAGGAAATCATTTTCCTACTGGCTACGCAATTATTCAACTTGTAACTCTCCAGACTAGGTATGTATTTCAACTGCCTCCCTACCTCTGAGGCAGAGGTAATTTGCGTACACTCTACTCTCCTCAGACCTCACTTTGTGGTATCTTACTGGGTATGTTTTTGTTGTATAATTCATCAGTACTTCATCTATCTGGAATATTCTCAACTTTTGTTCATGGAAGAATGTGTTAACTTTATTAATTGTTCTTTCTAGTAAAAGTGTAAAACTAGCTTCCACCCTTGTCAACGCTTTCTATCTTTAATTCTTTTTTATGGCATTGTTACTCAAGTGTTAAAACTTTGATGACAGACCTCATCCGAATGAATGTTCTGGGAGTGATTTGGATGGGGATATCTACTTTGTTTGCTGGGATCAAGACATGATCCCGCCAAGGCAAGTCCAGCCGATGGAATATCCTCCAGCACCCAGCATACAGTTGGACCATGATGTCACAATTGAGGTACCCTTAGTTTCGAACAACTAGTTTTACTTCCAAAAGTATCATGACTCTGATGCATCACGATGTTCAACCACTCTTACCTTACATGATCCTGATATTTTTCTTTCCTTCTAATCCTTTTTTTGTCAACGCTTCATATTAGTCCACTAATTCTATTGCTGAGATTACCTTCTCGAAGACTTAGATTCAGTCAAATCTAGTTTAGTGCGAGTGTTAGGTGCATCAACTACAGACTGGTTACTGTACTTTTCTATTGCTGAGATCTCCTTCTCTAGGATCTATCAATTCATGAGACCAAAAAAAAAAAAATGGAACAGCATTGACTCTTGAAATCATACTTATAAGATGTGTAATGCGATACAAGTACTGAGGAACTCTTCAGTTTTTTTTTGTTTGTTGTGGGGCAGGGGGGATTGGCCAGTATGTGCAAGTACTGAGGAACTCCCTTTCACCTGTCTACCTACTGCAGGAAGTTGAAGAGTACTTCACCAACTATATTGTGAATGACAGTTTGGGAATCATAGCAAATGCCCATGTCGTATTTGCAGACAGAGAACCTGATATGGCCATGAGTGATCCATGCAAAAAACTTGCTGAGCTCTTTTCAATTGCAGTGGACTTTCCAAAGACTGGTGTTCCCGCTGAAATACCATCTCAGTTGCGCCCTAAAGAATACCCAGACTTCATGGATAAGCCGGACAAGACCAGCTATATCTCAGAAAGAGTTATTGGAAAGCTTTTCAGGAAAGTGAAGGACAAAGCACCTCAGGCTAGCTCTATCGCGACCTTCACAAGAGATGTTGCAAGGAGATCATATGATGCTGATATGGAAGTTGATGGATTTGAAGATTACATTGACGAAGCTTTTGACTACAAAACTGAATATGACAACAAGCTGGGTAATTTAATGGACTACTATGGCATAAAAACAGAGGCTGAAATACTTAGTGGTGGCATTATGAAGGCATCAAAAACTTTTGACCGCAGAAAAGATGCTGAGGCCATTAGTGTTGCTGTGAGGGCCTTGAGGAAGGAGGCAAGAGCCTGGTTCAAGAGGCGTAATGATATAGATGACATGTTACCAAAGGCTTCGGCTTGGTACCACGTTACATATCATCCTACATATTGGGGTTGCTACAATCAGGGGTTGAAAAGAGCTCATTTCATTAGCTTTCCCTGGTGTGTTTATGACCAGCTAATCCAGATTAAGAAGGACAAAGCACGTAACAGGCCAGTTCTCAACTTGTCATCTCTCAGGGCTCAACTGAGTCACAGATTAGTGTTGAAATGAGATTCCAGTCGAGCGTTAAGCTGATATATATATAATGTAATAGGGTGTGATCATAAGAAAACTGTTATGCATTGTTGACTACCTTTTGTCTTTAAAACTGCATGAAGCTGCAACATATATGCAGTACTCTAAGAAACAGATGTACAGCTAAGTACTAATATGTATGTGATTTGAGTTTCATCTTTCTTCTAAACATGGTT</genome_strand>
        <mrna_strand>GAAATATTCTTTACTTACTTCACCAGGGATTGACTCATCACTCCCCTCAAGTCTTTGTGTGTTGTGATAATAAATTTGGTTGTGCTTCAGTTTCAGTCACTACTGCTGGGTAGTTTTTATTTTGCATA.........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACTTCAGGGGGTATTCCAGTTGGTGTTAGCATTTGAAAGTCGAACTGCACTTGGAATTTGGCTACATGGGAAAGACAATTCAGGTTTTCGGATTCCCTTATCTTCTCTCTGCGGAAGTGGTTAAGTCATTCTTAGAGAAATATACAGGATATGGAACTGTATGTGCATTGGAGGTTAAACAGTCCAAAGGAGGATCTAGAGCATTTGCCAAAGTTCAATTTGCCGACAACATAAGTGCTGACAAAATCATCACTTTGGCTAATAACAGGCTGTATTTTGGCTCTTCTTATTTGAAGGCTTGGGAAATGAAAACTGATATTGTCCAACTGCGGGCATATGTGGATCAGATGGATGGCATAACTTTGAATTTCGGATGTCAGATATCAGATGACAAGTTTGCAGTGTTGGGAAGTACAGAAGTTTCAATTCAATTTGGCATTGGATTGAAGAAATTTTTTTTCTTTTTATCTAGTGGTTCAGCTGACTATAAACTTCAGCTTTCATATGAAAATATATGGCAGGTTGTGCTCCATCGTCCATATGGTCAAAATGCTCAGTTTCTCCTCATACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTATTTGGTGCTCCTCGGATCTATAAGAGACTTGAAAACTCCTGTTATAGCTTCTTTAAGGAAACTCCTGATGATCAGTGGGTGAGGACAACAGATTTCCCTCCATCTTGGATAGGGCTATCTTCTAGCTTATGTTTGCAGTTCCGTAGGGGTGTTCGTCTTCCAAATTTCGAGGAAAGTTTTTTCCACTATGCAGAACGTGAAAACAATATTACTTTACAGACTGGTTTCACCTTTTTCGTCTCTCAAAAATCGGCTCTGGTTCCCAATGTCCAGCCTCCGGAAGGAATTTCAATTCCCTACAAGATTTTGTTCAAAATTAGTTCTTTGGTACAGCATGGATGCATACCTGGGCCAGCATTAAATGTCTACTTTTTCCGATTAGTTGATCCTCGAAGGAGAAATGTGGCATGCATTGAGCATGCCTTAGAGAAACTGTACTATATAAAGGAGTGCTGTTATGATCCGGTGAGGTGGCTCACTGAGCAGTATGATGGGTATCTCAAGGGTAGACAACCTCCAAAATCTCCGTCCATCACTTTAGATGATGGGTTGGTGTATGTAAGAAGGGTCCTAGTAACACCATGCAAAGTTTATTTTTGTGGTCCAGAGGTTAATGTTTCCAATCGGGTTCTCCGCAATTATTCTGAAGACATAGATAACTTTCTTCGTGTTTCTTTTGTTGATGAGGAGTGGGAGAAACTGTATTCTACAGACTTATTACCAAAAGCAAGTACTGGAAGTGGTGTCAGGACAAACATCTATGAGAGGATCTTATCAACTCTGCGGAAAGGCTTTGTAATTGGTGATAAAAAATTTGAATTTCTTGCATTTTCATCGAGCCAGTTGCGGGATAATTCAGTGTGGATGTTTGCATCAAGACCTGGCCTTACTGCAAATGATATAAGAGCTTGGATGGGTGATTTTTCGCAGATCAAGAATGTCGCAAAATATGCTGCCAGACTTGGTCAATCTTTTGGTTCCTCCAGAGAGACTTTGAGTGTTCTTAGGCATGAGATTGAAGTTATTCCCGATGTAAAGGTTCATGGAACCAGCTATGTCTTTTCTGATGGAATTGGTAAAATATCTGGTGACTTTGCTCATAGAGTTGCCTCAAAATGTGGCCTTCAATATACCCCATCTGCTTTCCAGATTCGTTATGGTGGATATAAAGGTGTTGTGGGTGTTGATCCGGATTCATCAATGAAGTTGTCTTTGAGAAAGAGCATGTCGAAATATGAATCAGACAACATAAAGTTAGATGTCCTTGGATGGAGCAAATATCAGCCTTGTTATCTTAATCGTCAACTGATTACGCTCTTGTCTACACTTGGAGTGAAAGATGAAGTTCTCGAACAGAAGCAAAAGGAAGCTGTAGATCAGCTTGATGCTATCTTGCATGATTCTTTGAAGGCACAGGAGGCTTTGGAATTGATGTCTCCTGGAGAGAACACTAATATTCTCAAGGCAATGCTAAACTGTGGTTATAAGCCTGATGCTGAGCCCTTTCTTTCAATGATGTTGCAAACCTTCCGCGCCATCCAAGTTGCTCGATTTGCGGACTAGATCAAGAATATTTATTCCAAATGGAAGAACAATGATGGGATGTTTGGATGAATCCAGAACCTTGGAATATGGTCAGGTGTTTGTTCAGTTTACTGGTGCTGGACATGGAGAGTTTTCTGACGATTTACATCCATTTAATAACAGCAGATCCACCAACAGTAATTTCATTCTGAAGGGAAATGTGGTTGTTGCAAAAAATCCATGCTTGCATCCTGGTGATATTCGTGTTTTAAAGGCTGTAAATGTTCGAGCGCTGCACCACATGGTAGATTGTGTTGTATTCCCTCAGAAAGGAAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................ACCTCATCCGAATGAATGTTCTGGGAGTGATTTGGATGGGGATATCTACTTTGTTTGCTGGGATCAAGACATGATCCCGCCAAGGCAAGTCCAGCCGATGGAATATCCTCCAGCACCCAGCATACAGTTGGACCATGATGTCACAATTGAG.....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGTTGAAGAGTACTTCACCAACTATATTGTGAATGACAGTTTGGGAATCATAGCAAATGCCCATGTCGTATTTGCAGACAGAGAACCTGATATGGCCATGAGTGATCCATGCAAAAAACTTGCTGAGCTCTTTTCAATTGCAGTGGACTTTCCAAAGACTGGTGTTCCCGCTGAAATACCATCTCAGTTGCGCCCTAAAGAATACCCAGACTTCATGGATAAGCCGGACAAGACCAGCTATATCTCAGAAAGAGTTATTGGAAAGCTTTTCAGGAAAGTGAAGGACAAAGCACCTCAGGCTAGCTCTATCGCGACCTTCACAAGAGATGTTGCAAGGAGATCATATGATGCTGATATGGAAGTTGATGGATTTGAAGATTACATTGACGAAGCTTTTGACTACAAAACTGAATATGACAACAAGCTGGGTAATTTAATGGACTACTATGGCATAAAAACAGAGGCTGAAATACTTAGTGGTGGCATTATGAAGGCATCAAAAACTTTTGACCGCAGAAAAGATGCTGAGGCCATTAGTGTTGCTGTGAGGGCCTTGAGGAAGGAGGCAAGAGCCTGGTTCAAGAGGCGTAATGATATAGATGACATGTTACCAAAGGCTTCGGCTTGGTACCACGTTACATATCATCCTACATATTGGGGTTGCTACAATCAGGGGTTGAAAAGAGCTCATTTCATTAGCTTTCCCTGGTGTGTTTATGACCAGCTAATCCAGATTAAGAAGGACAAAGCACGTAACAGGCCAGTTCTCAACTTGTCATCTCTCAGGGCTCAACTGAGTCACAGATTAGTGTTGAAATGAGATTCCAGTCGAGCGTTAAGCTGATATATATATAATGTAATAGGGTGTGATCATAAGAAAACTGTTATGCATTGTTGACTACCTTTTGTCTTTAAAACTGCATGAAGCTGCAACATATATGCAGTACTCTAAGAAACAGATGTACAGCTAAGTACTAATATGTATGTGATTTGAGTTTCATCTTTCTTCTAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U337771" ref_strand="+" ref_description="SGN-U337771        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | CAAX amino terminal protease family protein, contains Pfam profile PF02517: CAAX amino terminal protease family | chr1:4874870-4877229 REVERSE | Aliases: F14L17.3, F14L17_3(evalue: 6e-84, score=304) genbank/nr: gi|53749451|gb|AAU90306.1| putative CAAX amino terminal protease family protein [Solanum tuberosum] (evalue: 2e-112, score=398)">
      <seq>ggaattggcaaactgtttcactttcttcacttgcatgtggattaaggactaatcgaggcagcgtcaataccctatgtaggacttgatgtagaagcattgagcttggacgagaaggctgaaattttgttcgctgatcaagctataacaactgcagttgtgctaatagtcctttatgctctcaccaagtcatctcaaccacttcctgatgacatatatcgttatgatctgaaggaacctttcaatctccagagaggatggcttttgtgggctggaattggtctagggggagcaataggtgcaattgctttaacaggagtagcaatgtctgctttcaatggtgagccgccacaaagagagactgatgcgcttgctcggttactcccattgataggctcctcaagtatcagcactgcttctctgctgggcattaccggtgtacttgctccaattctcgaggagactgtgtttagaggattttttatggtctctctgactaagtgggtacctacaccgcttgcagcggttattagtggtgctgtatttgctcttgcacatctcactcctggacaatttcctcagttgtttgttcttgggactgctctgggtttttcttatgctcaaacgcgaaacctcctaaccccaatcacaattcatgctttatggaactctggtgttattttgcttcttaccttccttcagctccaaggatatgatatcagggaaataatacaaggaacttgacttgggcaccataattctctggacaaagtcgtcttcatcagcttgtcgcagttgctgaacgtaggaacgaatctggttttattttctgtaatttaggccaaatgctggttggagcttgcaagtaatgtgggaagccgaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="108729" stop="104989"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108429" g_stop="108384" g_length="46"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="46" r_length="46" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108383" i_stop="107940" i_length="444">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.983" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="107939" g_stop="107846" g_length="94"/>
          <reference_exon_boundary r_type="cDNA" r_start="47" r_stop="140" r_length="94" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="107845" i_stop="107765" i_length="81">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107764" g_stop="107682" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="141" r_stop="223" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107681" i_stop="107553" i_length="129">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107552" g_stop="107419" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="224" r_stop="357" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107418" i_stop="107276" i_length="143">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="107275" g_stop="107226" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="358" r_stop="407" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="107225" i_stop="107078" i_length="148">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="107077" g_stop="106985" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="408" r_stop="500" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="106984" i_stop="106170" i_length="815">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="106169" g_stop="106078" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="592" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="106077" i_stop="105689" i_length="389">
            <donor d_prob="0.698" d_score="1.00"/>
            <acceptor a_prob="0.956" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="105688" g_stop="105582" g_length="107"/>
          <reference_exon_boundary r_type="cDNA" r_start="593" r_stop="699" r_length="107" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="105581" i_stop="105472" i_length="110">
            <donor d_prob="0.931" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="105471" g_stop="105289" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="700" r_stop="882" r_length="183" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U337771" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>882</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U337771" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108429" e_stop="108384"/>
          <exon e_start="107939" e_stop="107846"/>
          <exon e_start="107764" e_stop="107682"/>
          <exon e_start="107552" e_stop="107419"/>
          <exon e_start="107275" e_stop="107226"/>
          <exon e_start="107077" e_stop="106985"/>
          <exon e_start="106169" e_stop="106078"/>
          <exon e_start="105688" e_stop="105582"/>
          <exon e_start="105471" e_stop="105289"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGAATTGGCAAACTGTTTCACTTTCTTCACTTGCATGTGGATTAAGGTGTAATTTTGTTACCTGGCTAAGGTTTTAAACATGTTGCTCGGACTCTTCAAAAATGTTTGATTAGTGCATGTTGGATCCTTCAAAAGTAGTGCATTTTTTTTTGAAGGATCCGACATGTGTGTGGCATCATTTTTGGAGAGTTTGAGCAACATAGGTTTGAATGTCTGAGTAATGAAGTATTATCTTATTGTGAAATGTAAAAAGATTGAACCTTTTTTATAATGGGATGTATTATTGCAACTGAGCATGACAGAAGATTTATGAACTGTAACATTTTATTTGATAATGGTAGTTTTATTCCTTTTGTTGGTGTAAAATATCTTTGTAAGTTGAAATTTATGTTTTGTCTTTGAACTTGGAAGCATAATGGGGTAACTAGTAACCAGTATTGGTCTTGGTAGGAAAAAGCTAACTAATATTCAGGCAGTTTTGTTTTGACAGGACTAATCGAGGCAGCGTCAATACCCTATGTAGGACTTGATGTAGAAGCATTGAGCTTGGACGAGAAGGCTGAAATTTTGTTCGCTGATCAAGCGTATGGACAGTCATTTTAGCATTGTTTCCATATTGTGTCGAATCTTGATGATTCTGATGTTTCGTGTATTTCTTTTTTCAGTATAACAACTGCAGTTGTGCTAATAGTCCTTTATGCTCTCACCAAGTCATCTCAACCACTTCCTGATGACATATATCGTTATGGTAATTAGCATTTCCACGTTATGGGATGATTCATTCATCTGTTGCTTTGTTTGGTGAGAAAACTGGATTGCAGTTTCCTCTACTCTAAAAGATTACAGTGTGGTTGATTATGATCTGTTAGTATTCCAGATCTGAAGGAACCTTTCAATCTCCAGAGAGGATGGCTTTTGTGGGCTGGAATTGGTCTAGGGGGAGCAATAGGTGCAATTGCTTTAACAGGAGTAGCAATGTCTGCTTTCAATGGTGAGCCGCCACAAAGAGAGGTTAGAGTTGAACTTAACAGTTTATCCAATCTCTCGGATTAAGAATTTCATTCTTTGTATAACCTTTGAAGCAAATTAAATTTCATTTTTCTCTCCTGTGATGTTTTCTTTTTCCCTCGTGAATTCCTTAAAACTTATTACAGACTGATGCGCTTGCTCGGTTACTCCCATTGATAGGCTCCTCAAGTATCAGGTATTTTCGAAGGAAGTTTGAAGTTCATCTGTAAATTATCTCTGTCATCAATAGGTTAATTGCTTTTGTGTTGACGGCTTTCCAGCCACTTATTGAGTACTTATGCATGATATACAATTGAGTAACCACCTTTCTTTTTTTTATGTAGCACTGCTTCTCTGCTGGGCATTACCGGTGTACTTGCTCCAATTCTCGAGGAGACTGTGTTTAGAGGATTTTTTATGGTCTCTCTGACTAAGTGGTATAATTCTTTCTTTATAAATTTGATTTTAGATATACTACTGCTTCCCATTTGTTAGAACTGGCTCTATGTGTCTGAGTCTCCCGGACTTTGTTGAAGAACTTCAAAAAGAAGGGACAAAAAGTTTTGAATTGCTCAAGATTTGATAACGTTGTTACTCCACTGGATCATTATCTCTTGTGAGCATAAAAACACAATAAACATGTAAACATTCTTTTTTCACTAGTTGATCTACTATCTTACTTTTATATTCCCTCATTGTCTAGAAGCTCCTGTCATGAAAGATGAATACGAATTAGTAGGGCTGCCCCTAATAACTCTTTTTGAGTGGACATCTAAGATATCATCATGCCAAGCACAAAACAGGCTAGCAAAGACCAATAGCCTGACCTTTCTGTATCCTTCGACTAGAAAGCAATTGAGAGAGGTTGTCAAACCCAAAATGGAGTTGAGTCGTTAAACTCATTTTGACCTTGTTTGGATTTCATTCATGAGCTAAACAGATAAAAGCACATTTAAATGAATAAACGAGACCACATGTAAGACTTTTGGACTTTGTTAGCTCTATCATAAATAAGGCTCATTGTAATAGAGCTAACAAACTCAACTCTTCTGTACCTATTTTGCTATCATGCATCTTCTTGATGCCATTTATAAAACTACATCATAAAAAAGAATAAAAGAAAAATCAGTGGAAGAAAATTGTCTTATGACTTTATTACTTGTGGCTGATTCATATATACACATGCATGTCTATTGTCGACATGTGACTTGATGCTTCATTGTCTCTCAAGCTTTTCCATTTTTCCTTGCAGGGTACCTACACCGCTTGCAGCGGTTATTAGTGGTGCTGTATTTGCTCTTGCACATCTCACTCCTGGACAATTTCCTCAGTTGTTTGTTCTTGGTATTGCTTCCATTTTCTTAAATGTATACGACACTGAACGAAAGTAGAGGAAAAGCAGAAATTACAAAAAGGAATAACATAATTGGGTTTTACTTCTGAAAGTTCTCAAAAAGATCTATTTATGAAGGAGAAAATAGTTATAGTAAGAATTGATTTTACCTTGTAAGACATGATCAACAACTTTCTGTAGTTTTTGAGCTTTTATTCAATTTTAGAGGAATGAAATGAATTCAAACATGGTAAAAATGGATACAAAGGGTTCATGTAGTGTACCTCTACTAGTTTGGAATTGAAGCACCGTTGAGGCAAATACTTAAATTGATTCTACCCTTTCTTATAGTGCATTTTTCTTCATGTTTAATCTGAGCTGAAAAATGACATGCTTTCAGGGACTGCTCTGGGTTTTTCTTATGCTCAAACGCGAAACCTCCTAACCCCAATCACAATTCATGCTTTATGGAACTCTGGTGTTATTTTGCTTCTTACCTTCCTTCAGGTAATCTGTTCCTCATTGTCATTTAAAGCATGGCAACAGTATTTGTTGCCATGTTGCTTTCTGTGAATATGCTAGTCTGATTTCTTCCTCTTGAACTCTTTTTTGTGTAGCTCCAAGGATATGATATCAGGGAAATAATACAAGGAACTTGACTTGGGCACCATAATTCTCTGGACAAAGTCGTCTTCATCAGCTTGTCGCAGTTGCTGAACGTAGGAACGAATCTGGTTTTATTTTCTGTAATTTAGGCCAAATGCTGGTTGGAGCTTGCAAGTAATGTGGGAAGCCGAAAA</genome_strand>
        <mrna_strand>GGAATTGGCAAACTGTTTCACTTTCTTCACTTGCATGTGGATTAAG............................................................................................................................................................................................................................................................................................................................................................................................................................................................GACTAATCGAGGCAGCGTCAATACCCTATGTAGGACTTGATGTAGAAGCATTGAGCTTGGACGAGAAGGCTGAAATTTTGTTCGCTGATCAAGC.................................................................................TATAACAACTGCAGTTGTGCTAATAGTCCTTTATGCTCTCACCAAGTCATCTCAACCACTTCCTGATGACATATATCGTTATG.................................................................................................................................ATCTGAAGGAACCTTTCAATCTCCAGAGAGGATGGCTTTTGTGGGCTGGAATTGGTCTAGGGGGAGCAATAGGTGCAATTGCTTTAACAGGAGTAGCAATGTCTGCTTTCAATGGTGAGCCGCCACAAAGAGAG...............................................................................................................................................ACTGATGCGCTTGCTCGGTTACTCCCATTGATAGGCTCCTCAAGTATCAG....................................................................................................................................................CACTGCTTCTCTGCTGGGCATTACCGGTGTACTTGCTCCAATTCTCGAGGAGACTGTGTTTAGAGGATTTTTTATGGTCTCTCTGACTAAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACCTACACCGCTTGCAGCGGTTATTAGTGGTGCTGTATTTGCTCTTGCACATCTCACTCCTGGACAATTTCCTCAGTTGTTTGTTCTTG.....................................................................................................................................................................................................................................................................................................................................................................................................GGACTGCTCTGGGTTTTTCTTATGCTCAAACGCGAAACCTCCTAACCCCAATCACAATTCATGCTTTATGGAACTCTGGTGTTATTTTGCTTCTTACCTTCCTTCAG..............................................................................................................CTCCAAGGATATGATATCAGGGAAATAATACAAGGAACTTGACTTGGGCACCATAATTCTCTGGACAAAGTCGTCTTCATCAGCTTGTCGCAGTTGCTGAACGTAGGAACGAATCTGGTTTTATTTTCTGTAATTTAGGCCAAATGCTGGTTGGAGCTTGCAAGTAATGTGGGAAGCCGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U323104" ref_strand="+" ref_description="SGN-U323104        Tomato 200607 #1 [6 ESTs aligned] arabidopsis/peptide: | Symbol: None | CAAX amino terminal protease family protein, contains Pfam profile PF02517: CAAX amino terminal protease family | chr1:4874870-4877229 REVERSE | Aliases: F14L17.3, F14L17_3(evalue: 2e-79, score=293) genbank/nr: gi|47824907|gb|AAT38683.1| putative CAAX amino terminal protease family protein [Solanum demissum] (evalue: 1e-139, score=499)">
      <seq>cttttaaagaatggctggcaatttatgtataactctcactcaatcttcacccttttcaccaaaactttattattcatcaaaaccccttcttcagaaatcacatagaatctctattgccccatttctcaaatttcaagattcagctcctagtcaaggttctacaagagggttcactactatatgtttttctagtcccagaaatggtcctggttataaaggaggtggacctgattggccaattttgagacgctgggatgtgccatggaattggcaaactgtttcactttcttcacttgcatgtggattaagttttgttttgacaggactaatcgaggcagcgtcaataccctatgtaggacttgatgtagaagcattgagcttggacgagaaggctgaaattttgttcgctgatcaagctataacaactgcagttgtgctaatagtcctttatgctctcaccaagtcatctcaaccacttcctgatgacatatatcgttatgatctgaaggaacctttcaatctccagagaggatggcttttgtgggctggaattggtctagggggagcaataggtgcaattgctttaacaggagtagcaatgtctgctttcaatggtgagccgccacaaagagagactgatgcgcttgctcggttactcccattgataggctcctcaagtatcagcactgcttctctgctgggcattaccggtgtacttgctccaattctcgaggagactgtgtttagaggattttttatggtctctctgactaagtgggtacctacaccgcttgcagcggttattagtggtgctgtatttgctcttgcacatctcactcctggacaatttcctcagttgtttgttcttggtattgcttccattttcttaaatgtatacgacactgaacgaaagtagaggaaaagcagaaattacaaaaaggaataacataattgggttttacttctgaaagttctcaaaaagatctatttatgaaggagaaaatagttatagtaagaattgattttaccttgtaagacatgatcaacaactttctgtagtttttgagcttttattcaattttagaggaatgaaatgaattcaaacatggtaaaaatggatacaaagggttcatgtagtgtacctctactagtttggaattgaagcaccgttgaggcaaatacttaaattgattctaccctttcttatagtgcatttttcttcatgtttaatctgagctgaaaaatgacatgctttcagggactgctctgggtttttcttatgctcaaacgcgaaacctcctaaccccaatcacaattcatgctttatggaactctnggtgtattttgcttcttaccttccttcagggtatctgttcctcattgtcatttaagcatggcaacagtatttgttgccatgntgctttct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="109188" stop="105220"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="108888" g_stop="108672" g_length="217"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="217" r_length="217" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="108671" i_stop="108476" i_length="196">
            <donor d_prob="0.918" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="108475" g_stop="108384" g_length="92"/>
          <reference_exon_boundary r_type="cDNA" r_start="218" r_stop="309" r_length="92" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="108383" i_stop="107954" i_length="430">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="107953" g_stop="107846" g_length="108"/>
          <reference_exon_boundary r_type="cDNA" r_start="310" r_stop="417" r_length="108" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="107845" i_stop="107765" i_length="81">
            <donor d_prob="0.513" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="107764" g_stop="107682" g_length="83"/>
          <reference_exon_boundary r_type="cDNA" r_start="418" r_stop="500" r_length="83" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="107681" i_stop="107553" i_length="129">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.814" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="107552" g_stop="107419" g_length="134"/>
          <reference_exon_boundary r_type="cDNA" r_start="501" r_stop="634" r_length="134" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="107418" i_stop="107276" i_length="143">
            <donor d_prob="0.720" d_score="1.00"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="107275" g_stop="107226" g_length="50"/>
          <reference_exon_boundary r_type="cDNA" r_start="635" r_stop="684" r_length="50" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="107225" i_stop="107078" i_length="148">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="107077" g_stop="106985" g_length="93"/>
          <reference_exon_boundary r_type="cDNA" r_start="685" r_stop="777" r_length="93" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="106984" i_stop="106170" i_length="815">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="106169" g_stop="105520" g_length="650"/>
          <reference_exon_boundary r_type="cDNA" r_start="778" r_stop="1426" r_length="649" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U323104" ref_strand="+">
        <total_alignment_score>0.995</total_alignment_score>
        <cumulative_length_of_scored_exons>1427</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U323104" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="108888" e_stop="108672"/>
          <exon e_start="108475" e_stop="108384"/>
          <exon e_start="107953" e_stop="107846"/>
          <exon e_start="107764" e_stop="107682"/>
          <exon e_start="107552" e_stop="107419"/>
          <exon e_start="107275" e_stop="107226"/>
          <exon e_start="107077" e_stop="106985"/>
          <exon e_start="106169" e_stop="105520"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTAAAGAATGGCTGGCAATTTATGTATAACTCTCACTCAATCTTCACCCTTTTCACCAAAACTTTATTATTCATCAAAACCCCTTCTTCAGAAATCACATAGAATCTCTATTGCCCCATTTCTCAAATTTCAAGATTCAGCTCCTAGTCAAGGTTCTACAAGAGGGTTCACTACTATATGTTTTTCTAGTCCCAGAAATGGTCCTGGTTATAAAGTAAGTATAGTAAACTTCAAATTGTGATTAAGGGTATATCTTTTTTTATGCTATGTATATATTAGGTGGAAGTAATTGTGCTATGTTTATGGAATCTTGAAATTGAAAATGATAAATTTGAATGCTTTTGGAATGAGCTTCTTAGATTGGTTTTTCTCTGTGAGTAATTTTTTTTTTGTGTTTTTTTTTTCTACAGGGAGGTGGACCTGATTGGCCAATTTTGAGACGCTGGGATGTGCCATGGAATTGGCAAACTGTTTCACTTTCTTCACTTGCATGTGGATTAAGGTGTAATTTTGTTACCTGGCTAAGGTTTTAAACATGTTGCTCGGACTCTTCAAAAATGTTTGATTAGTGCATGTTGGATCCTTCAAAAGTAGTGCATTTTTTTTTGAAGGATCCGACATGTGTGTGGCATCATTTTTGGAGAGTTTGAGCAACATAGGTTTGAATGTCTGAGTAATGAAGTATTATCTTATTGTGAAATGTAAAAAGATTGAACCTTTTTTATAATGGGATGTATTATTGCAACTGAGCATGACAGAAGATTTATGAACTGTAACATTTTATTTGATAATGGTAGTTTTATTCCTTTTGTTGGTGTAAAATATCTTTGTAAGTTGAAATTTATGTTTTGTCTTTGAACTTGGAAGCATAATGGGGTAACTAGTAACCAGTATTGGTCTTGGTAGGAAAAAGCTAACTAATATTCAGGCAGTTTTGTTTTGACAGGACTAATCGAGGCAGCGTCAATACCCTATGTAGGACTTGATGTAGAAGCATTGAGCTTGGACGAGAAGGCTGAAATTTTGTTCGCTGATCAAGCGTATGGACAGTCATTTTAGCATTGTTTCCATATTGTGTCGAATCTTGATGATTCTGATGTTTCGTGTATTTCTTTTTTCAGTATAACAACTGCAGTTGTGCTAATAGTCCTTTATGCTCTCACCAAGTCATCTCAACCACTTCCTGATGACATATATCGTTATGGTAATTAGCATTTCCACGTTATGGGATGATTCATTCATCTGTTGCTTTGTTTGGTGAGAAAACTGGATTGCAGTTTCCTCTACTCTAAAAGATTACAGTGTGGTTGATTATGATCTGTTAGTATTCCAGATCTGAAGGAACCTTTCAATCTCCAGAGAGGATGGCTTTTGTGGGCTGGAATTGGTCTAGGGGGAGCAATAGGTGCAATTGCTTTAACAGGAGTAGCAATGTCTGCTTTCAATGGTGAGCCGCCACAAAGAGAGGTTAGAGTTGAACTTAACAGTTTATCCAATCTCTCGGATTAAGAATTTCATTCTTTGTATAACCTTTGAAGCAAATTAAATTTCATTTTTCTCTCCTGTGATGTTTTCTTTTTCCCTCGTGAATTCCTTAAAACTTATTACAGACTGATGCGCTTGCTCGGTTACTCCCATTGATAGGCTCCTCAAGTATCAGGTATTTTCGAAGGAAGTTTGAAGTTCATCTGTAAATTATCTCTGTCATCAATAGGTTAATTGCTTTTGTGTTGACGGCTTTCCAGCCACTTATTGAGTACTTATGCATGATATACAATTGAGTAACCACCTTTCTTTTTTTTATGTAGCACTGCTTCTCTGCTGGGCATTACCGGTGTACTTGCTCCAATTCTCGAGGAGACTGTGTTTAGAGGATTTTTTATGGTCTCTCTGACTAAGTGGTATAATTCTTTCTTTATAAATTTGATTTTAGATATACTACTGCTTCCCATTTGTTAGAACTGGCTCTATGTGTCTGAGTCTCCCGGACTTTGTTGAAGAACTTCAAAAAGAAGGGACAAAAAGTTTTGAATTGCTCAAGATTTGATAACGTTGTTACTCCACTGGATCATTATCTCTTGTGAGCATAAAAACACAATAAACATGTAAACATTCTTTTTTCACTAGTTGATCTACTATCTTACTTTTATATTCCCTCATTGTCTAGAAGCTCCTGTCATGAAAGATGAATACGAATTAGTAGGGCTGCCCCTAATAACTCTTTTTGAGTGGACATCTAAGATATCATCATGCCAAGCACAAAACAGGCTAGCAAAGACCAATAGCCTGACCTTTCTGTATCCTTCGACTAGAAAGCAATTGAGAGAGGTTGTCAAACCCAAAATGGAGTTGAGTCGTTAAACTCATTTTGACCTTGTTTGGATTTCATTCATGAGCTAAACAGATAAAAGCACATTTAAATGAATAAACGAGACCACATGTAAGACTTTTGGACTTTGTTAGCTCTATCATAAATAAGGCTCATTGTAATAGAGCTAACAAACTCAACTCTTCTGTACCTATTTTGCTATCATGCATCTTCTTGATGCCATTTATAAAACTACATCATAAAAAAGAATAAAAGAAAAATCAGTGGAAGAAAATTGTCTTATGACTTTATTACTTGTGGCTGATTCATATATACACATGCATGTCTATTGTCGACATGTGACTTGATGCTTCATTGTCTCTCAAGCTTTTCCATTTTTCCTTGCAGGGTACCTACACCGCTTGCAGCGGTTATTAGTGGTGCTGTATTTGCTCTTGCACATCTCACTCCTGGACAATTTCCTCAGTTGTTTGTTCTTGGTATTGCTTCCATTTTCTTAAATGTATACGACACTGAACGAAAGTAGAGGAAAAGCAGAAATTACAAAAAGGAATAACATAATTGGGTTTTACTTCTGAAAGTTCTCAAAAAGATCTATTTATGAAGGAGAAAATAGTTATAGTAAGAATTGATTTTACCTTGTAAGACATGATCAACAACTTTCTGTAGTTTTTGAGCTTTTATTCAATTTTAGAGGAATGAAATGAATTCAAACATGGTAAAAATGGATACAAAGGGTTCATGTAGTGTACCTCTACTAGTTTGGAATTGAAGCACCGTTGAGGCAAATACTTAAATTGATTCTACCCTTTCTTATAGTGCATTTTTCTTCATGTTTAATCTGAGCTGAAAAATGACATGCTTTCAGGGACTGCTCTGGGTTTTTCTTATGCTCAAACGCGAAACCTCCTAACCCCAATCACAATTCATGCTTTATGGAACTCT-GGTGTTATTTTGCTTCTTACCTTCCTTCAGGTAATCTGTTCCTCATTGTCATTTAAAGCATGGCAACAGTATTTGTTGCCATGTTGCTTTCT</genome_strand>
        <mrna_strand>CTTTTAAAGAATGGCTGGCAATTTATGTATAACTCTCACTCAATCTTCACCCTTTTCACCAAAACTTTATTATTCATCAAAACCCCTTCTTCAGAAATCACATAGAATCTCTATTGCCCCATTTCTCAAATTTCAAGATTCAGCTCCTAGTCAAGGTTCTACAAGAGGGTTCACTACTATATGTTTTTCTAGTCCCAGAAATGGTCCTGGTTATAAA....................................................................................................................................................................................................GGAGGTGGACCTGATTGGCCAATTTTGAGACGCTGGGATGTGCCATGGAATTGGCAAACTGTTTCACTTTCTTCACTTGCATGTGGATTAAG..............................................................................................................................................................................................................................................................................................................................................................................................................................................TTTTGTTTTGACAGGACTAATCGAGGCAGCGTCAATACCCTATGTAGGACTTGATGTAGAAGCATTGAGCTTGGACGAGAAGGCTGAAATTTTGTTCGCTGATCAAGC.................................................................................TATAACAACTGCAGTTGTGCTAATAGTCCTTTATGCTCTCACCAAGTCATCTCAACCACTTCCTGATGACATATATCGTTATG.................................................................................................................................ATCTGAAGGAACCTTTCAATCTCCAGAGAGGATGGCTTTTGTGGGCTGGAATTGGTCTAGGGGGAGCAATAGGTGCAATTGCTTTAACAGGAGTAGCAATGTCTGCTTTCAATGGTGAGCCGCCACAAAGAGAG...............................................................................................................................................ACTGATGCGCTTGCTCGGTTACTCCCATTGATAGGCTCCTCAAGTATCAG....................................................................................................................................................CACTGCTTCTCTGCTGGGCATTACCGGTGTACTTGCTCCAATTCTCGAGGAGACTGTGTTTAGAGGATTTTTTATGGTCTCTCTGACTAAGTG...............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTACCTACACCGCTTGCAGCGGTTATTAGTGGTGCTGTATTTGCTCTTGCACATCTCACTCCTGGACAATTTCCTCAGTTGTTTGTTCTTGGTATTGCTTCCATTTTCTTAAATGTATACGACACTGAACGAAAGTAGAGGAAAAGCAGAAATTACAAAAAGGAATAACATAATTGGGTTTTACTTCTGAAAGTTCTCAAAAAGATCTATTTATGAAGGAGAAAATAGTTATAGTAAGAATTGATTTTACCTTGTAAGACATGATCAACAACTTTCTGTAGTTTTTGAGCTTTTATTCAATTTTAGAGGAATGAAATGAATTCAAACATGGTAAAAATGGATACAAAGGGTTCATGTAGTGTACCTCTACTAGTTTGGAATTGAAGCACCGTTGAGGCAAATACTTAAATTGATTCTACCCTTTCTTATAGTGCATTTTTCTTCATGTTTAATCTGAGCTGAAAAATGACATGCTTTCAGGGACTGCTCTGGGTTTTTCTTATGCTCAAACGCGAAACCTCCTAACCCCAATCACAATTCATGCTTTATGGAACTCTNGGTG-TATTTTGCTTCTTACCTTCCTTCAGGGTATCTGTTCCTCATTGTCATTT-AAGCATGGCAACAGTATTTGTTGCCATGNTGCTTTCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316169" ref_strand="+" ref_description="SGN-U316169        Tomato 200607 #1 [17 ESTs aligned] arabidopsis/peptide: AT1G26850.2 | Symbol: None | dehydration-responsive family protein, similar to early-responsive to dehydration stress ERD3 protein (Arabidopsis thaliana) GI:15320410; contains Pfam profile PF03141: Putative methyltransferase | chr1:9300860-9304125 REVERSE | Aliases: None (evalue: 0, score=998) genbank/nr: gi|47824983|gb|AAT38756.1| putative methyltransferase [Solanum demissum] (evalue: 0, score=1267)">
      <seq>attgttggaatattttcatgccattgggctgcaatggcgggcaaaaactcaggggataataggactaggacttctgtatcaatatttataatagctggtctatgctgcttcttctatttacttggagcatggcaaagaagtggttttgggaaaggagatagtatagcagtggctgtcaccaagactgctggtgagaattgcgatgtactaccaaatctcaattttgaaactcgtcatgctggcgaagcaggtggtactgatgagtcggaagaagtcgaggaacttaagccatgtgatcctcagtacactgattatacaccatgtcaagatcaaaagcgtgctatgactttcccaagggaaaatatgaactaccgagaaaggcattgtccacctcaagaagagaagttacattgccttattccagcacctaagggatatgttaccccatttccgtggccaaaaagtcgggattatgttccctatgccaatgctccatataagagcttgactgttgagaaagctattcagaattgggttcaatatgagggtaatgtgtttaggttcccaggaggagggacacaattccctcaaggagcagataagtatattgatcagcttgcttcagtcgtcccaatcgagaatgggacagttcggactgctttggacactggttgtggggttgcaagttggggtgcttatctttggaaaaggaatgtcatagcaatgtcatttgccccaagagactcacatgaagctcaggttcagtttgctctggaaaggggtgtgcctgctgttattggtgtactaggaacaatcaaaatgccatatccatctaaagcctttgatatggcccattgttctcgttgtctaatcccatggggagctgctgatggaatcctcatgatggaagttgaccgagttcttagacctggaggctactgggtgctttctggacctcctatcaactggaaggtcaattttaaggcctggcaacgccccaaggaggatcttgaggaagaacaaaggaagattgaagaggctgctaaacttctttgctgggagaagatatctgagaagggagagactgctatttggcagaaaagaaaggatagtgcctcatgccgttctgcacaagaaaattctgcagccaaagtttgtaaaccttctgatccagatagtgtctggtacaacaaaatggaaatgtgcataacaccaaacaatggtaatggtggagacgagagtctaaagccattccctgagagactttatgctgttcctccaagaattgccaatggattagtttctggagtgtctgttgagaaatatcaagaagacagcaagaaatggaagaaacacgtaagtgcttataagaagatcaacaaactcctggacactggaaggtaccgcaacattatggacatgaatgctggactaggaggttttgcagcagcacttcacgatcccaagttttgggttatgaatgttatgccaacaatagctgagaagaatactttgggagttgtattcgaacggggactgaatggtatctatcatgactggtgtgaagcattttctacatacccaaggacatatgatctcattcatgctaatggccttttcagtttatataaggacaagtgtgactttcaagacattctcttagagatggaccgtattttgcgtccagaaggagctgtcattctaagagacaatgtagatgtactgatcaaggtgaagaagataataggaggcatgaggtggaacttcaaattgatggatcatgaggacggtccccttgttcccgaaaaaatactggttgctgtcaaacaatattggactctgggtgataccaactccacatcctcacaatgagatgccaccgaagatgttgtctgaccatatgaactcgtatggatcaggaagaccaacatcttatgaatacaaaatccatggttatgcaagacgtttcacccctaggaattttgatcgagcagggtcccttgacaggtgactccacggcacatctttagtcttgatggatccataaattataccagatgatttagcgtttataactgtcttcattttcttctctgttccatgtctcgttagataatgactctaaaaactgagctacatgggattattatgaagctttttgaaagtcctttataaacatttcttccctcgatatatagactctgtaatgtgttgtttaattaaagtggaaatttgatctagttgatttctgatatgaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="113817" stop="120388"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="114117" g_stop="114142" g_length="26"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="26" r_length="26" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="114143" i_stop="115093" i_length="951">
            <donor d_prob="0.669" d_score="0.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="115094" g_stop="115745" g_length="652"/>
          <reference_exon_boundary r_type="cDNA" r_start="27" r_stop="678" r_length="652" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="115746" i_stop="115861" i_length="116">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.962" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="115862" g_stop="116072" g_length="211"/>
          <reference_exon_boundary r_type="cDNA" r_start="679" r_stop="889" r_length="211" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="116073" i_stop="116216" i_length="144">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="116217" g_stop="116511" g_length="295"/>
          <reference_exon_boundary r_type="cDNA" r_start="890" r_stop="1184" r_length="295" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="116512" i_stop="117655" i_length="1144">
            <donor d_prob="0.949" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="117656" g_stop="118030" g_length="375"/>
          <reference_exon_boundary r_type="cDNA" r_start="1185" r_stop="1559" r_length="375" r_score="0.997"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="118031" i_stop="118850" i_length="820">
            <donor d_prob="0.960" d_score="0.98"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="118851" g_stop="118928" g_length="78"/>
          <reference_exon_boundary r_type="cDNA" r_start="1560" r_stop="1637" r_length="78" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="118929" i_stop="119466" i_length="538">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.974" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="119467" g_stop="120085" g_length="619"/>
          <reference_exon_boundary r_type="cDNA" r_start="1638" r_stop="2256" r_length="619" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="2257" polyA_stop="2277"/>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U316169" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>2256</cumulative_length_of_scored_exons>
        <coverage percentage="0.991" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316169" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="114117" e_stop="114142"/>
          <exon e_start="115094" e_stop="115745"/>
          <exon e_start="115862" e_stop="116072"/>
          <exon e_start="116217" e_stop="116511"/>
          <exon e_start="117656" e_stop="118030"/>
          <exon e_start="118851" e_stop="118928"/>
          <exon e_start="119467" e_stop="120085"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTGTTGGAATATTTTCATGCCATTGGTATGTGATTCTTGAATCATGTGTTAGCTGTGATCTGTTTATTTAATCATTGGAACTTTGTGATTTGGATTTGATTTCTTGTTTAGTTGATTCATTTGACAGGTGGGGTTTGTTTTAAAAAAGTTTGCTTGAGCTCATTTATGTTTTAAATCTGGTCCCTTTTTTTTTTTTTAATGTGATGTTGATCATTGATTAGATTAGCTGATTTAAATGAAAGTTATATCGTTGAGCATTTATTGTGGTGTGTAATTCATGGATAAAAGGTTTCTTCTTTGGTAGTGCATTGTGTTTGTTTGATGTTTTTGTTTTATTATGTTTGGAGTAAAGATATGGTTATTTAAGTGTTTGGTTAAAGCACTAGCCTGTTTAGTGTTATGTAGACCAGAATTCTTGAACTAGTAAAAGATCTGAATTTTGATCCTTAAGAAGTTTTGAATGCTTAAAAGATCCAATTGTTGTGGGATGTCCAAGAGGACTTTTGAGTGTTTGAAAGTTATGCTGGTTTCATCACTATGCTGGATCTGCAGTTATTCAACTTCTGATCATATCCCTGGCTTGAGGAATGAGAGCTTCATCTGATCTAAGTCTGCCTTTTGGTTTTAGTTGATCTCGACTAACTTTAGGAACTTAGATAACATTTGACATGAAAGGGTTGGCATGGATCCCTTACATTATGAGAGTGACGTGAGGAGGAACTTTGAAAGTTTTGTTTGAAATAATAAGCCTATGTGTAGAAAATTTAAGATCTTGAGACCTCAATAACCATTTATCACATTCTGAATTCTGATCTAGCTACAAGCTTGTATTTTTCTTACTCTAAATTATGAAAGGCCATGTTATATGCAATTAGTGATGTCTTGGTTTCCTTGCATCTTTTTATCACTTGAGGAAAATGTGCATCTGCATTTGTACTTCCTTTTCAATCCTAACGAGGCACTGAAATTATTTCAGGGCTGCAATGGCGGGCAAAAACTCAGGGGATAATAGGACTAGGACTTCTGTATCAATATTTATAATAGCTGGTCTATGCTGCTTCTTCTATTTACTTGGAGCATGGCAAAGAAGTGGTTTTGGGAAAGGAGATAGTATAGCAGTGGCTGTCACCAAGACTGCTGGTGAGAATTGCGATGTACTACCAAATCTCAATTTTGAAACTCGTCATGCTGGCGAAGCAGGTGGTACTGATGAGTCGGAAGAAGTCGAGGAACTTAAGCCATGTGATCCTCAGTACACTGATTATACACCATGTCAAGATCAAAAGCGTGCTATGACTTTCCCAAGGGAAAATATGAACTACCGAGAAAGGCATTGTCCACCTCAAGAAGAGAAGTTACATTGCCTTATTCCAGCACCTAAGGGATATGTTACCCCATTTCCGTGGCCAAAAAGTCGGGATTATGTTCCCTATGCCAATGCTCCATATAAGAGCTTGACTGTTGAGAAAGCTATTCAGAATTGGGTTCAATATGAGGGTAATGTGTTTAGGTTCCCAGGAGGAGGGACACAATTCCCTCAAGGAGCAGATAAGTATATTGATCAGCTTGCTTCAGTCGTCCCAATCGAGAATGGGACAGTTCGGACTGCTTTGGACACTGGTTGTGGGGTATGTTTCCTGCTTCGTGAACTGTTTTCTTCTCTAAACACATGTGTCTTTGCTTACATGGGAAGTATTTGTTATTCTATTGCTGTTTTGGCTAAGAATTTCTCAAATTGTGCTAGGTTGCAAGTTGGGGTGCTTATCTTTGGAAAAGGAATGTCATAGCAATGTCATTTGCCCCAAGAGACTCACATGAAGCTCAGGTTCAGTTTGCTCTGGAAAGGGGTGTGCCTGCTGTTATTGGTGTACTAGGAACAATCAAAATGCCATATCCATCTAAAGCCTTTGATATGGCCCATTGTTCTCGTTGTCTAATCCCATGGGGAGCTGCTGGTATGTATCTCATGTTGATATCCAAAAAATGGTTAAATTTTTAAAATTAGAGAGGCATTGTACTTGTTTGTCTGTATGTTTTAGCTAATTATTTCTTTCTGATGATGGTTTTTTAATTGCATTAATTGTTCATTCGTCATGTAGATGGAATCCTCATGATGGAAGTTGACCGAGTTCTTAGACCTGGAGGCTACTGGGTGCTTTCTGGACCTCCTATCAACTGGAAGGTCAATTTTAAGGCCTGGCAACGCCCCAAGGAGGATCTTGAGGAAGAACAAAGGAAGATTGAAGAGGCTGCTAAACTTCTTTGCTGGGAGAAGATATCTGAGAAGGGAGAGACTGCTATTTGGCAGAAAAGAAAGGATAGTGCCTCATGCCGTTCTGCACAAGAAAATTCTGCAGCCAAAGTTTGTAAACCTTCTGATCCAGATAGTGTCTGGTATGTCATCATACTTAATAGTTCAATTGTATGTGTTGGAGGTTCTCATATCTTCTCTTGGGAAAATGAAAAAGGTGAATGTGCTTCATGCGTCTCTATTCCTATGAGTGGCAGCTCTATTCTACTGTGAAATAGGTTTCTTGAGGTGCTTTAGAAATAAATTAGATCATGCCACCAGTTAGAATTACTTGAACATGAGAAACTTGTTTCTTTAGATGAATAGCATGTCAAGAAGGTTCAGTATGCGAATTTGAATTGTCTAGGTGGCAGAAAACTCACTAAGTATGCAGGACAATCCATTTGCCATAATCTGATAAGGTAAATATCACATTGTTAACTTACTAAGCAAACTGCGTTATGGAAGTGGCTTAGTGCATGCTACAACTTATCTCAACTCTCCAAGCCAAGGCCCTTCCTAAAAAAAGCGAAAAGAAAAAGGATAGACTGAGGTTCTTTCATTACATTGGACATGTAACTGTCAGTTTAAAAATTTCTTTAATGATTTAAGCTGTATGTTAGAAGTAAGATTTTCCTTCATATTTAGTTACATCCTGGTTTGAACATAGAAGCAATTTAAATAACTTGTTCTGCACTTCAATCTTTTCTCCTGTTCTCTTATCAACAGTTCTGGTCATCTAATTATTCGACAGCCACTTCTGCTTATTAAGCCAGCTGAAATTGTTCATTTGATGCTTAGTTCTTGTTGAGCACAATATATTTACTACCACAGGAATGCATCAACTGATAGCTAATAGCACGATGAACAGCACTGTCCTGTTTTGATGACCATAAACAAGATAACCCTTGCTTCATTTTGTCCAAACTGGTTTCTGATAGAATTGAGTATTTTAACTGGTTTAATTTACAGCTTTTAGTTTTAGGATTTCCAGAGAATGTAAAGTAATTCACATTTTATCTATAAATGCCTTTTTTTGCTGAATGTGACAGTAGGATTGGTATTGTGTTTTGAATAATTCGATATTTTGCAGTAAGTGATACAACCCTGAAATTGGTTGTTGTATATTGAAATGCATGATTACTGTGTTTTGTTTGAGGCAGCTTCAGTGGTCTTGTTGTGTTCATATTGTATCAATATTGAAAACAAGCTCATGGCTGATCCATTATTTTTACCTTTTTGGTTCAGGTACAACAAAATGGAAATGTGCATAACACCAAACAATGGTAATGGTGGAGACGAGAGTCTAAAGCCATTCCCTGAGAGACTTTATGCTGTTCCTCCAAGAATTGCCAATGGATTAGTTTCTGGAGTGTCTGTTGAGAAATATCAAGAAGACAGCAAGAAATGGAAGAAACACGTAAGTGCTTATAAGAAGATCAACAAACTCCTGGACACTGGAAGGTACCGCAACATTATGGACATGAATGCTGGACTAGGAGGTTTTGCAGCAGCACTTCACGATCCCAAGTTTTGGGTTATGAATGTTATGCCAACAATAGCTGAGAAGAATACTTTGGGAGTTGTATTCGAACGGGGACTGATTGGTATCTATCATGACTGGTACGTACTAATAGGGTATGAATGATCTATAGTTCTGATATTGAGATGATGATGTAGTTATTGGTGTCTCCTTATAATCTATCTTTTTAGGAATTACTCTCGTTGTCTCCCTCATAATCTGACTTTTTAGGAATTCAGTCCGTGTTTACTCTTGTCATGCAATTCCAGTCTCTGTTTACTGGTGGTCCTTCTCTTTCTTCAAAATTTTCATTATAGCTTTTTACTCTTGCATTTCTTTCAGACTGATTCTGAAAAATGTTTTTCTTGAGACAAAGGGTCTATCAAAAACAGTCTTTCTACCCCACAAAGGTCTGAATACACCCCACCCTCCCCACACCCCACTTGTGGGACTCTACTGGGTATGTTGTTATTGTTGATTTAACAGACATAGGACCATATGATAGAAACTCTCCTTTCCCCTGGTTCAATGTGTTTTGTTTACATGCTGGAGCTAAGATCAAGACTTTCACCCTAGTAAATGTCTAAATTTGTTAAAAATAGATGACTATGTCATTTCGTTTTTGACGAAATTCTCTATTATGAGTCCATGAAAATGTTTCACAAATGCACCTAAGATCCATATATACAAAAGTAATTTTCTCATTTGTTTCTATCAAAACGTACTCATGCTTTATTAAAATAGCAAAAAGGATGTCAAGAAAATGCAGTATGCTGTTTGAGAAAATAGCGTGTATCAAATTTATCTTTTTTTTTGTTCACAAGGAAGATACTAGTGTTATGTTTTACTTTATTTCTATTTATTCTCTTCCTTATGTAAGAGAAAGCTATCCTCTGATCATATAGTTATCTTCTGATTCAGGTGTGAAGCATTTTCTACATACCCAAGGACATATGATCTCATTCATGCTAATGGCCTTTTCAGTTTATATAAGGACAAGTAAGTTTTTATCTTCGCTATTTATTTATATTGCTAATTTACTTAGTATGTTCTTCATTTAGATAAAGAGCTTAATAGCACGGTGGTATTGCAGCTCCTTTATTGAAGGTCCTATTGTTGGCCGTGCCTAGTTGCTAATTAAGTAAAAAGGTCTAAATAATTGTGATATGATAAGAGCAAAGGTAGCTTAAGTAAATATACACTGATAGTAGATGATCATACACTTAAAATTTTAGGATAGTAACCTTCTCAGTATATGGTATAATGACTGATATTTGAAGTACCGACAGAAGTTTGCGTGTGTTGTGGCTAAATCCACCATCATTTCTCCTTTTTGCTGCTGTGACTTAATATGCTGTTATTCGTAACTGCACTGTTCTTGTTGAAATAGAAATGCCAGCTCGTCACTCTGGCAACTCATATCTCCCCCGTCTACTGATCCCCAGCCAGGAAAAGAAAAAAATACCCAGTTAAAGGGTGCTACAGGAAGAAAAATAATTGGTATCATTGACTAAATTAGCATTTTCTAATTTTATAGGTGTGACTTTCAAGACATTCTCTTAGAGATGGACCGTATTTTGCGTCCAGAAGGAGCTGTCATTCTAAGAGACAATGTAGATGTACTGATCAAGGTGAAGAAGATAATAGGAGGCATGAGGTGGAACTTCAAATTGATGGATCATGAGGACGGTCCCCTTGTTCCCGAAAAAATACTGGTTGCTGTCAAACAATATTGGACTCTGGGTGATACCAACTCCACATCCTCACAATGAGATGCCACCGAAGATGTTGTCTGACCATATGAACTCGTATGGATCAGGAAGACCAACATCTTATGAATACAAAATCCATGGTTATGCAAGACGTTTCACCCCTAGGAATTTTGATCGAGCAGGGTCCCTTGACAGGTGACTCCACGGCACATCTTTAGTCTTGATGGATCCATAAATTATACCAGATGATTTAGCGTTTATAACTGTCTTCATTTTCTTCTCTGTTCCATGTCTCGTTAGATAATGACTCTAAAAACTGAGCTACATGGGATTATTATGAAGCTTTTTGAAAGTCCTTTATAAACATTTCTTCCCTCGATATATAGACTCTGTAATGTGTTGTTTAATTAAAGTGGAAATTTGATCTAGTTGATTTCTGATATG</genome_strand>
        <mrna_strand>ATTGTTGGAATATTTTCATGCCATTG.......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGCTGCAATGGCGGGCAAAAACTCAGGGGATAATAGGACTAGGACTTCTGTATCAATATTTATAATAGCTGGTCTATGCTGCTTCTTCTATTTACTTGGAGCATGGCAAAGAAGTGGTTTTGGGAAAGGAGATAGTATAGCAGTGGCTGTCACCAAGACTGCTGGTGAGAATTGCGATGTACTACCAAATCTCAATTTTGAAACTCGTCATGCTGGCGAAGCAGGTGGTACTGATGAGTCGGAAGAAGTCGAGGAACTTAAGCCATGTGATCCTCAGTACACTGATTATACACCATGTCAAGATCAAAAGCGTGCTATGACTTTCCCAAGGGAAAATATGAACTACCGAGAAAGGCATTGTCCACCTCAAGAAGAGAAGTTACATTGCCTTATTCCAGCACCTAAGGGATATGTTACCCCATTTCCGTGGCCAAAAAGTCGGGATTATGTTCCCTATGCCAATGCTCCATATAAGAGCTTGACTGTTGAGAAAGCTATTCAGAATTGGGTTCAATATGAGGGTAATGTGTTTAGGTTCCCAGGAGGAGGGACACAATTCCCTCAAGGAGCAGATAAGTATATTGATCAGCTTGCTTCAGTCGTCCCAATCGAGAATGGGACAGTTCGGACTGCTTTGGACACTGGTTGTGGG....................................................................................................................GTTGCAAGTTGGGGTGCTTATCTTTGGAAAAGGAATGTCATAGCAATGTCATTTGCCCCAAGAGACTCACATGAAGCTCAGGTTCAGTTTGCTCTGGAAAGGGGTGTGCCTGCTGTTATTGGTGTACTAGGAACAATCAAAATGCCATATCCATCTAAAGCCTTTGATATGGCCCATTGTTCTCGTTGTCTAATCCCATGGGGAGCTGCTG................................................................................................................................................ATGGAATCCTCATGATGGAAGTTGACCGAGTTCTTAGACCTGGAGGCTACTGGGTGCTTTCTGGACCTCCTATCAACTGGAAGGTCAATTTTAAGGCCTGGCAACGCCCCAAGGAGGATCTTGAGGAAGAACAAAGGAAGATTGAAGAGGCTGCTAAACTTCTTTGCTGGGAGAAGATATCTGAGAAGGGAGAGACTGCTATTTGGCAGAAAAGAAAGGATAGTGCCTCATGCCGTTCTGCACAAGAAAATTCTGCAGCCAAAGTTTGTAAACCTTCTGATCCAGATAGTGTCTG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTACAACAAAATGGAAATGTGCATAACACCAAACAATGGTAATGGTGGAGACGAGAGTCTAAAGCCATTCCCTGAGAGACTTTATGCTGTTCCTCCAAGAATTGCCAATGGATTAGTTTCTGGAGTGTCTGTTGAGAAATATCAAGAAGACAGCAAGAAATGGAAGAAACACGTAAGTGCTTATAAGAAGATCAACAAACTCCTGGACACTGGAAGGTACCGCAACATTATGGACATGAATGCTGGACTAGGAGGTTTTGCAGCAGCACTTCACGATCCCAAGTTTTGGGTTATGAATGTTATGCCAACAATAGCTGAGAAGAATACTTTGGGAGTTGTATTCGAACGGGGACTGAATGGTATCTATCATGACTG....................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGAAGCATTTTCTACATACCCAAGGACATATGATCTCATTCATGCTAATGGCCTTTTCAGTTTATATAAGGACAA..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGTGACTTTCAAGACATTCTCTTAGAGATGGACCGTATTTTGCGTCCAGAAGGAGCTGTCATTCTAAGAGACAATGTAGATGTACTGATCAAGGTGAAGAAGATAATAGGAGGCATGAGGTGGAACTTCAAATTGATGGATCATGAGGACGGTCCCCTTGTTCCCGAAAAAATACTGGTTGCTGTCAAACAATATTGGACTCTGGGTGATACCAACTCCACATCCTCACAATGAGATGCCACCGAAGATGTTGTCTGACCATATGAACTCGTATGGATCAGGAAGACCAACATCTTATGAATACAAAATCCATGGTTATGCAAGACGTTTCACCCCTAGGAATTTTGATCGAGCAGGGTCCCTTGACAGGTGACTCCACGGCACATCTTTAGTCTTGATGGATCCATAAATTATACCAGATGATTTAGCGTTTATAACTGTCTTCATTTTCTTCTCTGTTCCATGTCTCGTTAGATAATGACTCTAAAAACTGAGCTACATGGGATTATTATGAAGCTTTTTGAAAGTCCTTTATAAACATTTCTTCCCTCGATATATAGACTCTGTAATGTGTTGTTTAATTAAAGTGGAAATTTGATCTAGTTGATTTCTGATATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316170" ref_strand="+" ref_description="SGN-U316170        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: AT1G26850.2 | Symbol: None | dehydration-responsive family protein, similar to early-responsive to dehydration stress ERD3 protein (Arabidopsis thaliana) GI:15320410; contains Pfam profile PF03141: Putative methyltransferase | chr1:9300860-9304125 REVERSE | Aliases: None (evalue: 4e-28, score=121) genbank/nr: gi|47824983|gb|AAT38756.1| putative methyltransferase [Solanum demissum] (evalue: 4e-37, score=157)">
      <seq>tggtattgcagctcctttattgaaggtcctattgttggccgtgcctagttgctaattaagtaaaaaggtctaaataattgtgatatgataagagcaaaggtagcttaagtaaatatacactgatagtagatgatcatacacttaaaattttaggatagtaaccttctcagtatatggtataatgactgatatttgaagtaccgacagaagtttgcgtgtgttgtggctaaatccaccatcatttctcctttttgctgctgtgacttaatatgctgttattcgtaactgcactgttcttgttgaaatagaaatgccagctcgtcactctggcaactcatatctcccccgtctactgatccccagccaggaaaagaaaaaaatacccagttaaagggtgctacaggaagaaaaataattggtatcattgactaaattagcattttctaattttataggtgtgactttcaagacattctcttagagatggaccgtattttgcgtccagaaggagctgtcattctaagagacaatgtagatgtactgatcaaggtgaagaagataataggaggcatgaggtggaacttcaaattgatggatcatgaggacggtccccttgttcccgaaaaaatactggttgctgtcaaacaatattggactctgggtgataccaactccacatcctcacaatgagatgccaccgaagatgttgtctgaccatatgaactcgtatgga</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="118712" stop="120044"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="119012" g_stop="119744" g_length="733"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="733" r_length="733" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U316170" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>733</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U316170" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="119012" e_stop="119744"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTATTGCAGCTCCTTTATTGAAGGTCCTATTGTTGGCCGTGCCTAGTTGCTAATTAAGTAAAAAGGTCTAAATAATTGTGATATGATAAGAGCAAAGGTAGCTTAAGTAAATATACACTGATAGTAGATGATCATACACTTAAAATTTTAGGATAGTAACCTTCTCAGTATATGGTATAATGACTGATATTTGAAGTACCGACAGAAGTTTGCGTGTGTTGTGGCTAAATCCACCATCATTTCTCCTTTTTGCTGCTGTGACTTAATATGCTGTTATTCGTAACTGCACTGTTCTTGTTGAAATAGAAATGCCAGCTCGTCACTCTGGCAACTCATATCTCCCCCGTCTACTGATCCCCAGCCAGGAAAAGAAAAAAATACCCAGTTAAAGGGTGCTACAGGAAGAAAAATAATTGGTATCATTGACTAAATTAGCATTTTCTAATTTTATAGGTGTGACTTTCAAGACATTCTCTTAGAGATGGACCGTATTTTGCGTCCAGAAGGAGCTGTCATTCTAAGAGACAATGTAGATGTACTGATCAAGGTGAAGAAGATAATAGGAGGCATGAGGTGGAACTTCAAATTGATGGATCATGAGGACGGTCCCCTTGTTCCCGAAAAAATACTGGTTGCTGTCAAACAATATTGGACTCTGGGTGATACCAACTCCACATCCTCACAATGAGATGCCACCGAAGATGTTGTCTGACCATATGAACTCGTATGGA</genome_strand>
        <mrna_strand>TGGTATTGCAGCTCCTTTATTGAAGGTCCTATTGTTGGCCGTGCCTAGTTGCTAATTAAGTAAAAAGGTCTAAATAATTGTGATATGATAAGAGCAAAGGTAGCTTAAGTAAATATACACTGATAGTAGATGATCATACACTTAAAATTTTAGGATAGTAACCTTCTCAGTATATGGTATAATGACTGATATTTGAAGTACCGACAGAAGTTTGCGTGTGTTGTGGCTAAATCCACCATCATTTCTCCTTTTTGCTGCTGTGACTTAATATGCTGTTATTCGTAACTGCACTGTTCTTGTTGAAATAGAAATGCCAGCTCGTCACTCTGGCAACTCATATCTCCCCCGTCTACTGATCCCCAGCCAGGAAAAGAAAAAAATACCCAGTTAAAGGGTGCTACAGGAAGAAAAATAATTGGTATCATTGACTAAATTAGCATTTTCTAATTTTATAGGTGTGACTTTCAAGACATTCTCTTAGAGATGGACCGTATTTTGCGTCCAGAAGGAGCTGTCATTCTAAGAGACAATGTAGATGTACTGATCAAGGTGAAGAAGATAATAGGAGGCATGAGGTGGAACTTCAAATTGATGGATCATGAGGACGGTCCCCTTGTTCCCGAAAAAATACTGGTTGCTGTCAAACAATATTGGACTCTGGGTGATACCAACTCCACATCCTCACAATGAGATGCCACCGAAGATGTTGTCTGACCATATGAACTCGTATGGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U346986" ref_strand="+" ref_description="SGN-U346986        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | phytochrome kinase, putative, contains similarity to Swiss-Prot:Q9SWI1 phytochrome kinase substrate 1 (Arabidopsis thaliana) | chr1:4877622-4879144 FORWARD | Aliases: F14L17.4, F14L17_4(evalue: 1e-13, score=73.6) genbank/nr: gi|47824984|gb|AAT38757.1| putative phytochrome kinase substrate 1 [Solanum demissum] (evalue: 2e-86, score=321)">
      <seq>acaataggagctaatcatcaagatttgcacttcaagagaattgatgattcaggagtagttggattgaaatcagatgagcgtttcgtcgttcctgtttatgatcctaaaggtgggaatgggatacaaatgatcaaaaaggaaacagaagaagaggaatcaagaaagtcactagaagtgtttggcttttcaataacagagaaagaaagaagcaaaatgagtcttgagaagaacataggcatgttaacatgggatgcaattgttccgaaagctgaagaaatcgacattatcaacataggtgcaagttcaaatggaacctatgaagaagattacgcagaaagtgatgcaagttcagacttgtttgaaatcg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="122142" stop="123108"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="122442" g_stop="122808" g_length="367"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="367" r_length="367" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U346986" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>367</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U346986" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="122442" e_stop="122808"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACAATAGGAGCTAATCATCAAGATTTGCACTTCAAGAGAATTGATGATTCAGGAGTAGTTGGATTGAAATCAGATGAGCGTTTCGTCGTTCCTGTTTATGATCCTAAAGGTGGGAATGGGATACAAATGATCAAAAAGGAAACAGAAGAAGAGGAATCAAGAAAGTCACTAGAAGTGTTTGGCTTTTCAATAACAGAGAAAGAAAGAAGCAAAATGAGTCTTGAGAAGAACATAGGCATGTTAACATGGGATGCAATTGTTCCGAAAGCTGAAGAAATCGACATTATCAACATAGGTGCAAGTTCAAATGGAACCTATGAAGAAGATTACGCAGAAAGTGATGCAAGTTCAGACTTGTTTGAAATCG</genome_strand>
        <mrna_strand>ACAATAGGAGCTAATCATCAAGATTTGCACTTCAAGAGAATTGATGATTCAGGAGTAGTTGGATTGAAATCAGATGAGCGTTTCGTCGTTCCTGTTTATGATCCTAAAGGTGGGAATGGGATACAAATGATCAAAAAGGAAACAGAAGAAGAGGAATCAAGAAAGTCACTAGAAGTGTTTGGCTTTTCAATAACAGAGAAAGAAAGAAGCAAAATGAGTCTTGAGAAGAACATAGGCATGTTAACATGGGATGCAATTGTTCCGAAAGCTGAAGAAATCGACATTATCAACATAGGTGCAAGTTCAAATGGAACCTATGAAGAAGATTACGCAGAAAGTGATGCAAGTTCAGACTTGTTTGAAATCG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U320734" ref_strand="+" ref_description="SGN-U320734        Tomato 200607 #1 [10 ESTs aligned] arabidopsis/peptide: | Symbol: None | AAA-type ATPase family protein, contains Pfam profile: ATPase family PF00004 | chr3:10716860-10718566 FORWARD | Aliases: MZN14.6(evalue: 2e-66, score=249) genbank/nr: gi|48057595|gb|AAT39939.1| putative ATPase protein [Solanum demissum] (evalue: 3e-92, score=341)">
      <seq>catgattgctgctatggctaattacttgaagtatgacgtctatgatcttgagctgacatcggttaaggacaataccgagctaagaaaactcctgatagatacaacaggtaaatctattattgtgattgaagacatagattgttcccttgacctaacaggtcaacgagagacgaataagaagaagaaagaagaggaagataaaggaaaaactgaggaagatgccgtcaaggagaagatgaaaaaaggcggagagacgaaagaaaagcaaagtgaggtaactttatcaggactattgaacttcattgatggtctatggtcagctattggcggtgaaaggctaatcgtcttcactacaaactacgtggagaagcttgatcctgctctaatccggagggggagaatggataaacatattgtcctatcatactgttgctttgagtcattcaaagttcttgcacataactatcttgacgtcgttgaatctcatgttcactttcctcagattcgtcgtttattagaggaaactaatatgactcctgctgatattgctgagaatttgatgcctaagtcttcaaaggaaaatgcagatatttgtttagagagattgattaaagctctcgaaactgcaaaagaggaagcgaaacttaaggctgaggaagaagagagagcaaaggcggctgagaaggagaaagaagagaaagatcgcgaggaaaagaaagaagtaacagctactgaagaagctaagagtgttgacagtgtaaacgaaaaagataatggtgttaaggaaaatggtaatgttagcaaaagttgatgaatacacatataagaaagtatgtttggaggtgttttagctttctgttttctacaattagctgaacttgtaataagttgttggtgaaggttaataagaaaactttttttaatcatgaaaaaaaaaaaaaaaaaaaaaaaaactcgagtctagttc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="128545" stop="9287"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="128245" g_stop="127278" g_length="968"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="967" r_length="967" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U320734" ref_strand="+">
        <total_alignment_score>0.977</total_alignment_score>
        <cumulative_length_of_scored_exons>968</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U320734" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="128245" e_stop="127278"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGATTGCTGCTATGGCTAATTACTTGAAGTATGACGTCTATGATCTTGAGCTGACATCGGTTAAGGACAATACCGAGCTAAGAAAACTCCTGATAGATACAACAGGTAAATCTATTATTGTGATTGAAGACATAGATTGTTCCCTTGACCTAACAGGTCAACGAGAGACGAATAAGAAGAAGAAAGAAGAGGAAGATAAAGGAAAAACTGAGGAAGATGCCGTCAAGGAGAAGATGAAAAAAGGCGGAGAGACGAAAGAAAAGCAAAGTGAGGTAACTTTATCAGGACTATTGAACTTCATTGATGGTCTATGGTCAGCTATTGGCGGTGAAAGGCTAATCGTCTTCACTACAAACTACGTGGAGAAGCTTGATCCTGCTCTAATCCGGAGGGGGAGAATGGATAAACATATTGTCCTATCATACTGTTGCTTTGAGTCATTCAAAGTTCTTGCACATAACTATCTTGACGTCGTTGAATCTCATGTTCACTTTCCTCAGATTCGTCGTTTATTAGAGGAAACTAATATGACTCCTGCTGATATTGCTGAGAATTTGATGCCTAAGTCTTCAAAGGAAAATGCAGATATTTGTTTAGAGAGATTGATTAAAGCTCTCGAAACTGCAAAAGAGGAAGCGAAACTTAAGGCTGAGGAAGAAGAGAGAGCAAAGGCGGCTGAGAAGGAGAAAGAAGAGAAAGATCGCGAGGAAAAGAAAGAAGTAACAGCTACTGAAGAAGCTAAGAGTGTTGACAGTGTAAACGAAAAAGATAATGGTGTTAAGGAAAATGGTAATGTTAGCAAAAGTTGATGAATACACATATAAGAAAGTATGTTTGGAGGTGTTTTAGCTTTCTGTTTTCTACAATTAGCTGAACTTGTAATAAGTTGTTGGTGAAGGTTAATAAGAAAACTTTTTTTAATCATGAAACACTCAAATTTTAGCATCACAATCCATATTTTGCCTC</genome_strand>
        <mrna_strand>CATGATTGCTGCTATGGCTAATTACTTGAAGTATGACGTCTATGATCTTGAGCTGACATCGGTTAAGGACAATACCGAGCTAAGAAAACTCCTGATAGATACAACAGGTAAATCTATTATTGTGATTGAAGACATAGATTGTTCCCTTGACCTAACAGGTCAACGAGAGACGAATAAGAAGAAGAAAGAAGAGGAAGATAAAGGAAAAACTGAGGAAGATGCCGTCAAGGAGAAGATGAAAAAAGGCGGAGAGACGAAAGAAAAGCAAAGTGAGGTAACTTTATCAGGACTATTGAACTTCATTGATGGTCTATGGTCAGCTATTGGCGGTGAAAGGCTAATCGTCTTCACTACAAACTACGTGGAGAAGCTTGATCCTGCTCTAATCCGGAGGGGGAGAATGGATAAACATATTGTCCTATCATACTGTTGCTTTGAGTCATTCAAAGTTCTTGCACATAACTATCTTGACGTCGTTGAATCTCATGTTCACTTTCCTCAGATTCGTCGTTTATTAGAGGAAACTAATATGACTCCTGCTGATATTGCTGAGAATTTGATGCCTAAGTCTTCAAAGGAAAATGCAGATATTTGTTTAGAGAGATTGATTAAAGCTCTCGAAACTGCAAAAGAGGAAGCGAAACTTAAGGCTGAGGAAGAAGAGAGAGCAAAGGCGGCTGAGAAGGAGAAAGAAGAGAAAGATCGCGAGGAAAAGAAAGAAGTAACAGCTACTGAAGAAGCTAAGAGTGTTGACAGTGTAAACGAAAAAGATAATGGTGTTAAGGAAAATGGTAATGTTAGCAAAAGTTGATGAATACACATATAAGAAAGTATGTTTGGAGGTGTTTTAGCTTTCTGTTTTCTACAATTAGCTGAACTTGTAATAAGTTGTTGGTGAAGGTTAATAAGAAAACTTTTTTTAATCATGAAA-AAAAAAAAAAAAAAAAAAAAAACTCGAGTCTAGTTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322889" ref_strand="+" ref_description="SGN-U322889        Tomato 200607 #1 [7 ESTs aligned] arabidopsis/peptide: | Symbol: None | AAA-type ATPase family protein, contains Pfam profile: ATPase family PF00004 | chr5:16037446-16038990 REVERSE | Aliases: MYH19.21, MYH19_21(evalue: 6e-49, score=190) genbank/nr: gi|48057595|gb|AAT39939.1| putative ATPase protein [Solanum demissum] (evalue: 2e-99, score=363)">
      <seq>ttgaatactccaattaacttcaagatgatgcaagatctatggactcaattgggtcctaccattgcagccatcatgttcacctggaccatgtaccagaactacttccctcacgaacttcgcggtcatattaggaggtataccgataaactcgtgaactatttctatccttatatgcacattatcttttatgaacttgaaactgaagggtggtttgagcggagcaaagcttacgtatcgattgaaaggtacctaagcaagagctcgagcacacaagctaagcgtctcaaagccaattcggtgaaggatggtcaatcgcttgtcctaaccatggatgatcatgaggagataacggatgaatataaaggcgagaaggtttggtggatttcgagcaaaaaaccagcgagcaggcagacaatatctttgtataaggaggatgagaagagatatttcaagctaaaatttcacaaaaagaatcgcgaccttgtcacaaattcatacttgaagtatgtgttggatgaaggaaaggcgatatctgtgaaagaacgacagagaaagctgtacacgaacaataagggagatggaggtggttatagatacaggggagggaggatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="129342" stop="128131"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="129042" g_stop="128431" g_length="612"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="612" r_length="612" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U322889" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>612</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U322889" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="129042" e_stop="128431"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTGAATACTCCAATTAACTTCAAGATGATGCAAGATCTATGGACTCAATTGGGTCCTACCATTGCAGCCATCATGTTCACCTGGACCATGTACCAGAACTACTTCCCTCACGAACTTCGCGGTCATATTAGGAGGTATACCGATAAACTCGTGAACTATTTCTATCCTTATATGCACATTATCTTTTATGAACTTGAAACTGAAGGGTGGTTTGAGCGGAGCAAAGCTTACGTATCGATTGAAAGGTACCTAAGCAAGAGCTCGAGCACACAAGCTAAGCGTCTCAAAGCCAATTCGGTGAAGGATGGTCAATCGCTTGTCCTAACCATGGATGATCATGAGGAGATAACGGATGAATATAAAGGCGAGAAGGTTTGGTGGATTTCGAGCAAAAAACCAGCGAGCAGGCAGACAATATCTTTGTATAAGGAGGATGAGAAGAGATATTTCAAGCTAAAATTTCACAAAAAGAATCGCGACCTTGTCACAAATTCATACTTGAAGTATGTGTTGGATGAAGGAAAGGCGATATCTGTGAAAGAACGACAGAGAAAGCTGTACACGAACAATAAGGGAGATGGAGGTGGTTATAGATACAGGGGAGGGAGGATG</genome_strand>
        <mrna_strand>TTGAATACTCCAATTAACTTCAAGATGATGCAAGATCTATGGACTCAATTGGGTCCTACCATTGCAGCCATCATGTTCACCTGGACCATGTACCAGAACTACTTCCCTCACGAACTTCGCGGTCATATTAGGAGGTATACCGATAAACTCGTGAACTATTTCTATCCTTATATGCACATTATCTTTTATGAACTTGAAACTGAAGGGTGGTTTGAGCGGAGCAAAGCTTACGTATCGATTGAAAGGTACCTAAGCAAGAGCTCGAGCACACAAGCTAAGCGTCTCAAAGCCAATTCGGTGAAGGATGGTCAATCGCTTGTCCTAACCATGGATGATCATGAGGAGATAACGGATGAATATAAAGGCGAGAAGGTTTGGTGGATTTCGAGCAAAAAACCAGCGAGCAGGCAGACAATATCTTTGTATAAGGAGGATGAGAAGAGATATTTCAAGCTAAAATTTCACAAAAAGAATCGCGACCTTGTCACAAATTCATACTTGAAGTATGTGTTGGATGAAGGAAAGGCGATATCTGTGAAAGAACGACAGAGAAAGCTGTACACGAACAATAAGGGAGATGGAGGTGGTTATAGATACAGGGGAGGGAGGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U342256" ref_strand="-" ref_description="SGN-U342256        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G69640.1 | Symbol: None | acid phosphatase, putative, similar to GI:5360721 from (Lupinus albus) | chr1:26197322-26199319 REVERSE | Aliases: F24J1.22 (evalue: 6e-57, score=217) genbank/nr: gi|47900697|gb|AAT39296.1| putative acid phosphatase [Solanum demissum] (evalue: 1e-64, score=249)">
      <seq>ggttgcccggaaatctcttccatatcttctttaaaaacaactccgcttgccatgatatccatcaccagcttttcgggagcaagtataactattcacagcctttctttgtgacgtgggataggatacttggtacctacatgccatatgaacttgagaggagaccagaaggaggttttgaagctaagcctgttaaagattgcaaggaacattgtcaatactgttagcacatgtttgtcatagagtatgtaccgcggcaatttttgcattattataacggttagtttactcatttaatttgtatagagtatatagttaaaagggttctgcatatattgttgaataactgatgttggtttcgaggtttgagaaaggaatagggtcgaataatagtttcccttttaaacattgtctcaagatctgatatctgggatattcaactgcaggcagagagataaatgattggtgaaatgcattgtgtgcctttaattctttgtaacaaaaagaaaaaaaaaataaaaaccgagactagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="133890" stop="132786"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133590" g_stop="133098" g_length="493"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="493" r_length="493" r_score="0.966"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="504" polyA_stop="519"/>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U342256" ref_strand="-">
        <total_alignment_score>0.966</total_alignment_score>
        <cumulative_length_of_scored_exons>493</cumulative_length_of_scored_exons>
        <coverage percentage="0.930" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U342256" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="133590" e_stop="133098"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GGTTGCCCGGAAATCTCTTCCATATCTTCTTTAAAAACAACTCCGCTTACCATGATATCCATCACCAGCTTTACGGGACCAAGTATAACTATTCACAGCCTTTCTTTGTGACGTGGGATAGGATACTTGGTACCTACATGCCATATGAACTTGAGAGGAGACCAGAAGGAGGTTTTGAAGCTAAGCCTGTTAAAGATTGCAAGGAACATTGACAATACTGTTAGTACATGTTTGTCATAGAGTATGTACCACTGCAATTTTTGCATTATTCTAATGCTTAGTTTACTCATTTAATTTGTATAGAGTATATAGTTAAAAGGGTTCTGCATATATTGTTGTATAACTGATGTTGGTTTCGAGGTTTGAGAAAGGAATAGGGTCGAATAATAGTTTCCTTTTTAAACATTGTCTCAAGATCTGATATCTGGTATATTCAACTGCAGGCAGAGAGATAAATGATTACTGAAATACATTGTGTGCCTTTAATTCTTTA</genome_strand>
        <mrna_strand>GGTTGCCCGGAAATCTCTTCCATATCTTCTTTAAAAACAACTCCGCTTGCCATGATATCCATCACCAGCTTTTCGGGAGCAAGTATAACTATTCACAGCCTTTCTTTGTGACGTGGGATAGGATACTTGGTACCTACATGCCATATGAACTTGAGAGGAGACCAGAAGGAGGTTTTGAAGCTAAGCCTGTTAAAGATTGCAAGGAACATTGTCAATACTGTTAGCACATGTTTGTCATAGAGTATGTACCGCGGCAATTTTTGCATTATTATAACGGTTAGTTTACTCATTTAATTTGTATAGAGTATATAGTTAAAAGGGTTCTGCATATATTGTTGAATAACTGATGTTGGTTTCGAGGTTTGAGAAAGGAATAGGGTCGAATAATAGTTTCCCTTTTAAACATTGTCTCAAGATCTGATATCTGGGATATTCAACTGCAGGCAGAGAGATAAATGATTGGTGAAATGCATTGTGTGCCTTTAATTCTTTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339830" ref_strand="+" ref_description="SGN-U339830        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G14290.1 | Symbol: None | acid phosphatase, putative, similar to acid phosphatase (Lupinus albus) GI:5360721; contains Pfam profile PF01598 sterol desaturase | chr1:4880046-4881947 REVERSE | Aliases: F14L17.5, F14L17_5 (evalue: 2e-18, score=90.1) genbank/nr: gi|47825000|gb|AAT38772.1| putative acid phosphatase [Solanum demissum] (evalue: 1e-36, score=156)">
      <seq>gcaaaacaataatatcctctctgaaaaattgattatttttgttaaattttttctgaattttgtttttttttgctgtttgaaattccttccaattctatttggaagagaatttcaatcaaaaccatatatctccactgttctctttctctacaaaccctaatttcaattttatacaaagtttgaatcttttacagagtttcaaagaaatctcagtttttcttttattgggtatttatttgttttccttttaagattattttgaaaaagatagtgattttctttttccttttaagggtaatttaaaaaaaaaaagatttaaaaaggaacaaattttgtttctttattgggttttttcaattaagggtgatgtcaagaaggtataaaggaaggatcttggtgatattttgtatttttgagatggtgggtagtgtgaatattgatcaacaggggaagggaggatatgtgtcanatgaagttttgggaacatttataccaatagttgtgtattgggta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="137379" stop="136260"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="137079" g_stop="136560" g_length="520"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="513" r_length="513" r_score="0.962"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U339830" ref_strand="+">
        <total_alignment_score>0.962</total_alignment_score>
        <cumulative_length_of_scored_exons>520</cumulative_length_of_scored_exons>
        <coverage percentage="1.014" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U339830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="137079" e_stop="136560"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAAACAATAATATCCTCTCTGAAAAATTGATTATTTTTGTTAAATTTTTTCTGAATTTTGTTTTTTTTTTGCTGTTTGAAATTCCTTCCAATTCTATTTGGAAGAGAATTTCAATC-AAACCATATATCTCCACTGTTCTCTTTCTCTACAAACCCTAATTTCAATTTTATACAAAGTTTGAATCTTTTACAAAGTTTCAAAGAAATCTCAGTTTTTCTTTTATTGGGTATTTGTTTGTTTTCTTTTTAAGGGCAATTTTGAAAAAGATAGTGATTTTCTTTTTCCTTTTAAGGGTAATTTTCAAAAAAAAAAAAAAAGATTTAAAAAGGAACAAATTTTGTTTCTTTATTGGGTTTTTTCAATTAAGGGTGATTTCAAGAAGGTATAAAGGAAGGATCTTGGTAATAGTTTGTATTTTTGAGATGGTGGGTAGTGTGAATATTGATCAACAGGGGAAGGGAGGATATGTGTCAGATGAAGTTTTGGGAACATTTATACCAATAGTTGTGTATTGGGTA</genome_strand>
        <mrna_strand>GCAAAACAATAATATCCTCTCTGAAAAATTGATTATTTTTGTTAAATTTTTTCTGAATTTTGTTTTTTTTT-GCTGTTTGAAATTCCTTCCAATTCTATTTGGAAGAGAATTTCAATCAAAACCATATATCTCCACTGTTCTCTTTCTCTACAAACCCTAATTTCAATTTTATACAAAGTTTGAATCTTTTACAGAGTTTCAAAGAAATCTCAGTTTTTCTTTTATTGGGTATTTATTTGTTTTCCTTTTAA-GATTATTTTGAAAAAGATAGTGATTTTCTTTTTCCTTTTAAGGGTAA-TTT-----AAAAAAAAAAAGATTTAAAAAGGAACAAATTTTGTTTCTTTATTGGGTTTTTTCAATTAAGGGTGATGTCAAGAAGGTATAAAGGAAGGATCTTGGTGATATTTTGTATTTTTGAGATGGTGGGTAGTGTGAATATTGATCAACAGGGGAAGGGAGGATATGTGTCANATGAAGTTTTGGGAACATTTATACCAATAGTTGTGTATTGGGTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U339831" ref_strand="+" ref_description="SGN-U339831        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G69640.1 | Symbol: None | acid phosphatase, putative, similar to GI:5360721 from (Lupinus albus) | chr1:26197322-26199319 REVERSE | Aliases: F24J1.22 (evalue: 8e-79, score=283) genbank/nr: gi|47900697|gb|AAT39296.1| putative acid phosphatase [Solanum demissum] (evalue: 1e-90, score=305)">
      <seq>ttaaggaaaagaaatcactatctttttcatattgccctagataagaaaacaaacaaatatccaataaaagaaaaactgagatttctttgaaactttgtaaaagattcaaactttgtataaaattgaaattagggtttgtagagaaagagaacagtggagatatatggtttgattgaaattctcttccaaatagaattggaaggaatttcaaacagcaaaaaaaaaac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="+" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="136491" stop="137318"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="136789" g_stop="137018" g_length="230"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="227" r_length="227" r_score="0.957"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="+" ref_id="SGN-U339831" ref_strand="+">
        <total_alignment_score>0.957</total_alignment_score>
        <cumulative_length_of_scored_exons>230</cumulative_length_of_scored_exons>
        <coverage percentage="1.013" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U339831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="136789" e_stop="137018"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAGGAAAAAGAAAATCACTATCTTTTTCAAAATTGCCCTTAAAAAGAAAACAAACAAATACCCAATAAAAGAAAAACTGAGATTTCTTTGAAACTTTGTAAAAGATTCAAACTTTGTATAAAATTGAAATTAGGGTTTGTAGAGAAAGAGAACAGTGGAGATATATGGTTTGATTGAAATTCTCTTCCAAATAGAATTGGAAGGAATTTCAAACAGCAAAAAAAAAAC</genome_strand>
        <mrna_strand>TTAAGG-AAAAGAAA-TCACTATCTTTTTC-ATATTGCCCTAGATAAGAAAACAAACAAATATCCAATAAAAGAAAAACTGAGATTTCTTTGAAACTTTGTAAAAGATTCAAACTTTGTATAAAATTGAAATTAGGGTTTGTAGAGAAAGAGAACAGTGGAGATATATGGTTTGATTGAAATTCTCTTCCAAATAGAATTGGAAGGAATTTCAAACAGCAAAAAAAAAAC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U328357" ref_strand="+" ref_description="SGN-U328357        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | similar to putative origin recognition complex subunit 6 (ORC6) containing protein [Solanum demissum] (GB:AAT39295.1); contains InterPro domain Origin recognition complex subunit 6 (InterPro:IPR008721) | chr1:9298809-9300686 FORWARD | Aliases: T2P11.3, T2P11_3(evalue: 1e-104, score=376) genbank/nr: gi|47900696|gb|AAT39295.1| putative origin recognition complex subunit 6 (ORC6) containing protein [Solanum demissum] (evalue: 3e-153, score=543)">
      <seq>aacaaatggatctttccgacatcgcccgaaagctcggtctcactgagaccaaacatctggttcgcaaagcggccgagctccgacgactcgccgatgtacagttcgattcctccgccattggcgttggggagatctgcaaggctattatttgcttagagattgctgcttctaggatggatgtggtgtttgatcgtcaggcagcgataaaattgagtgggatgtcggagaaggcttacaacagatcattcacttcaatgcagaatggaattggagtgaaaaacaagcttgatattagagaattggcaattcagtttgggtgtatcaggctcattccttttgttcaaaaaggtctatcattatacaaagaccggtttcgtacatccttgccaccttctagaagggcaagtgctgatttcagtcgacctgtgttcactgctgctgcgttctatctgtgtgcaaaaaggcacaagctcaaggttgataaaatgaagctaattgaactttgtggaacatcagaacctgaatttgctagtgtttctacctcaatgaatgatctttgttttgatgtttttgggacatcaaaggagaaaaaggatcccaagacagtgaaggggaaccgagaactgctcgatgcattacctgaaaaaaggagggttgaagacggtggctattcatccgaggatgataattcatcagcttacaagaagcgtaaacgcatggatgaacatgcttatcaggaatggaaatctactgtcctctcatcaaaaaaccaaagcggccaaaaagctcctaaacaaaccaaacaagcccggcgggacttcatgaagaaagttcctgaaactaaagtccaagcaacataagtctccattgtccttcaattagacaaattttgggtgatttatcaaacagtggacact</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="142780" stop="139364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="142480" g_stop="142356" g_length="125"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="125" r_length="125" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="142355" i_stop="142263" i_length="93">
            <donor d_prob="0.346" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="142262" g_stop="142216" g_length="47"/>
          <reference_exon_boundary r_type="cDNA" r_start="126" r_stop="172" r_length="47" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="142215" i_stop="141632" i_length="584">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="141631" g_stop="141527" g_length="105"/>
          <reference_exon_boundary r_type="cDNA" r_start="173" r_stop="277" r_length="105" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="141526" i_stop="141395" i_length="132">
            <donor d_prob="0.903" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="141394" g_stop="141314" g_length="81"/>
          <reference_exon_boundary r_type="cDNA" r_start="278" r_stop="358" r_length="81" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="141313" i_stop="141036" i_length="278">
            <donor d_prob="0.977" d_score="1.00"/>
            <acceptor a_prob="0.836" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="141035" g_stop="140924" g_length="112"/>
          <reference_exon_boundary r_type="cDNA" r_start="359" r_stop="470" r_length="112" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="140923" i_stop="140820" i_length="104">
            <donor d_prob="0.987" d_score="1.00"/>
            <acceptor a_prob="0.996" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="140819" g_stop="140757" g_length="63"/>
          <reference_exon_boundary r_type="cDNA" r_start="471" r_stop="533" r_length="63" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="140756" i_stop="140621" i_length="136">
            <donor d_prob="0.991" d_score="1.00"/>
            <acceptor a_prob="0.986" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="140620" g_stop="140533" g_length="88"/>
          <reference_exon_boundary r_type="cDNA" r_start="534" r_stop="621" r_length="88" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="140532" i_stop="140419" i_length="114">
            <donor d_prob="0.922" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="140418" g_stop="140351" g_length="68"/>
          <reference_exon_boundary r_type="cDNA" r_start="622" r_stop="689" r_length="68" r_score="1.000"/>
        </exon>
        <intron i_serial="8">
          <gDNA_intron_boundary i_start="140350" i_stop="139995" i_length="356">
            <donor d_prob="0.923" d_score="1.00"/>
            <acceptor a_prob="0.997" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="9">
          <gDNA_exon_boundary g_start="139994" g_stop="139898" g_length="97"/>
          <reference_exon_boundary r_type="cDNA" r_start="690" r_stop="786" r_length="97" r_score="1.000"/>
        </exon>
        <intron i_serial="9">
          <gDNA_intron_boundary i_start="139897" i_stop="139796" i_length="102">
            <donor d_prob="0.995" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="10">
          <gDNA_exon_boundary g_start="139795" g_stop="139664" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="787" r_stop="917" r_length="131" r_score="0.977"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U328357" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>918</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U328357" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="142480" e_stop="142356"/>
          <exon e_start="142262" e_stop="142216"/>
          <exon e_start="141631" e_stop="141527"/>
          <exon e_start="141394" e_stop="141314"/>
          <exon e_start="141035" e_stop="140924"/>
          <exon e_start="140819" e_stop="140757"/>
          <exon e_start="140620" e_stop="140533"/>
          <exon e_start="140418" e_stop="140351"/>
          <exon e_start="139994" e_stop="139898"/>
          <exon e_start="139795" e_stop="139664"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AACAAATGGATCTTTCCGACATCGCCCGAAAGCTCGGTCTCACTGAGACCAAACATCTGGTTCGCAAAGCGGCCGAGCTCCGACGACTCGCCGATGTACAGTTCGATTCCTCCGCCATTGGCGTTGTAAGTAACGATATGATGGATTGGTTGCTGGGAATTGAGGTTTATTTGATTAGAATTGGATGGGATTGAATTTTGATTGATTTTTCTTTGTAGGGGGAGATCTGCAAGGCTATTATTTGCTTAGAGATTGCTGCTTCTAGGTATAATTTCAGTTTTTTTTCTTCTCTGATTGTTTGGGTGAATTCTGTTCCAAGTTGTATTAGGGTTGAAGTGTAACGATCAGTTAATTATGGGTATGCCAAATTTGTTTGGGTTGGTTATATGAATCTGCTATTTCATTTTTGGATAGATATAAATTGGGCGTATGCAGAGTCGGGTTATTAAATGGGTTGATTTGGATGTCAATTTGTAGTACTGATGAATCAAGTAACTGGGTTATATAGATTTCGTTATATCTGATATCTATTTCATTTATATACTAAATAATTGTGAATGTAGAAATAGCCTCTTGTAGAAATGTAGTGTAAGGCTGCGTGCAGTAGGCAACTGTAAGTTGTGTCCTTCTATGTAGTATAAGGCTGCGTGCAGTAGGCAATTGTAAGTTGTGTCCTTCTATGTAGTGTAAGGCTGCGTGCAGTAGGCAATTGTAAGTTGTGTCCTTCTCCGGACTGCCAAATAGCTGGAGGTCTAGTGCATCTAGACAAAATTACTGATGCCACTGTAAGATGTGGGATATGAGTGACATTTGTCTATGATTTGTAATATGTTCTGGTGATAAATGTAGGATGGATGTGGTGTTTGATCGTCAGGCAGCGATAAAATTGAGTGGGATGTCGGAGAAGGCTTACAACAGATCATTCACTTCAATGCAGAATGGAATTGGAGTGAAGTCAGTTCTTGAGCTTTTGTTTCACTGTACATTTTCCTTTTTGTGAATCTGTACATGCCTTTTGGAGGCAAATCGTGCTTTGTTAGATGTTAGATTCTTGCTGATGTGAAAAGTTTTTTTAAAACTTTGCAGAAACAAGCTTGATATTAGAGAATTGGCAATTCAGTTTGGGTGTATCAGGCTCATTCCTTTTGTTCAAAAAGGTCTATCATTGTAAGTTTGATCATCTACTTTGAACTCATGATCTTACATATTTGTTGTTTTGATTGTCCTGCCTATGATGTTTGTTTGGTCTTGTGTTTGAGAGCCTAATTGGACAAGAATAAGCTGCTTTTGTATTTTTTTTAAGGGATTTGGTTTCGCATGTTTGTGACCTATCTGTGCCTGTTTTTTCTATATTTCAGCATGCTAGAGTTTCTAGTTTTGATGGGGTTATACAAATAGTTAAGAGAGTTCTTAAGTAGGTTCTGATGATTATAATTCCTTTCCAGATACAAAGACCGGTTTCGTACATCCTTGCCACCTTCTAGAAGGGCAAGTGCTGATTTCAGTCGACCTGTGTTCACTGCTGCTGCGTTCTATCTGTGTGCAAAAAGGCACAAGGTTTGTTCAATCTACTCCTCAAGCATTGTTAGTCCTGCTGTGGTTGTAGCAGCATGATAGTTTGGAATGAACTGGCTCACAGTTTTCTTGTTCTGTGTTTGCAGCTCAAGGTTGATAAAATGAAGCTAATTGAACTTTGTGGAACATCAGAACCTGAATTTGCTAGTGTAAGGCCTTTGCTCCTTTAGTTCCTTGTTTCTTTTTCATTGTTATTATCATCAAATTGTTTCTTTACTTCAGCTATCAGTTCCCTGTACTATGGACTATGGTTCTAATATTTTTATGTGGATTGAAATGATGCAGGTTTCTACCTCAATGAATGATCTTTGTTTTGATGTTTTTGGGACATCAAAGGAGAAAAAGGATCCCAAGACAGTGAAGGGGAACCGAGGTAACACATGTTGATTGATCAAGTTCCTCACTTTATTACAAGCAAAATGTGGTTCAGTGTTTTTCAATACACATATGATGATACATACTTTAACATAGTGATTTGCATATGCAGAACTGCTCGATGCATTACCTGAAAAAAGGAGGGTTGAAGACGGTGGCTATTCATCCGAGGATGATAATGTAAATGAGAAGCTCTCTCTCTTGAATTTTGCTACTATTTAATGATGCCATAACACTAATTAACATAAGTAAGGAACACAGAAACACTCAACTCAGATATAAACACCTGTTTATGTATATGTTAACCATAGAAGATATGGCAAGCCACATTGATGCTTATTTGAACCCCTAGATTAGAAAAAAAATTATGATGAATTTGACTGGTTACTGGCTCATCTTGAAGTAAATTATCATTGAATGGAAGTTATAATCTCTGCAAATCTTTGTGCTCGAGTTATATAGTCAATTAAAGTTCTTACAAGTTACATCTCAGTTTGTGTTGTTTCTTGCTGATTTTGAAACCTTCCATTTTGCAGTCATCAGCTTACAAGAAGCGTAAACGCATGGATGAACATGCTTATCAGGAATGGAAATCTACTGTCCTCTCATCAAAAAACCAAAGCGGCCAAAAAGGTAACATAAATGAATACTTGATCCATAACTAAGAGTTCCATGAACATTTAGTAGTTACATTAGCTTATGTGCTGATGCAAAATTGTCTGTTTATTCTTGTAGCTCCTAAACAAACCAAACAAGCCCGGCTGGACTTCATGAAGAAAGTTCCTGAAACTAAAGTCCAAGCAACATAAGTCTCCATTGTCCTTCAATTAGACAAATTTTGGTTGATTTTATCAAACAGTGGACACT</genome_strand>
        <mrna_strand>AACAAATGGATCTTTCCGACATCGCCCGAAAGCTCGGTCTCACTGAGACCAAACATCTGGTTCGCAAAGCGGCCGAGCTCCGACGACTCGCCGATGTACAGTTCGATTCCTCCGCCATTGGCGTT.............................................................................................GGGGAGATCTGCAAGGCTATTATTTGCTTAGAGATTGCTGCTTCTAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GATGGATGTGGTGTTTGATCGTCAGGCAGCGATAAAATTGAGTGGGATGTCGGAGAAGGCTTACAACAGATCATTCACTTCAATGCAGAATGGAATTGGAGTGAA....................................................................................................................................AAACAAGCTTGATATTAGAGAATTGGCAATTCAGTTTGGGTGTATCAGGCTCATTCCTTTTGTTCAAAAAGGTCTATCATT......................................................................................................................................................................................................................................................................................ATACAAAGACCGGTTTCGTACATCCTTGCCACCTTCTAGAAGGGCAAGTGCTGATTTCAGTCGACCTGTGTTCACTGCTGCTGCGTTCTATCTGTGTGCAAAAAGGCACAAG........................................................................................................CTCAAGGTTGATAAAATGAAGCTAATTGAACTTTGTGGAACATCAGAACCTGAATTTGCTAGT........................................................................................................................................GTTTCTACCTCAATGAATGATCTTTGTTTTGATGTTTTTGGGACATCAAAGGAGAAAAAGGATCCCAAGACAGTGAAGGGGAACCGAG..................................................................................................................AACTGCTCGATGCATTACCTGAAAAAAGGAGGGTTGAAGACGGTGGCTATTCATCCGAGGATGATAAT....................................................................................................................................................................................................................................................................................................................................................................TCATCAGCTTACAAGAAGCGTAAACGCATGGATGAACATGCTTATCAGGAATGGAAATCTACTGTCCTCTCATCAAAAAACCAAAGCGGCCAAAAAG......................................................................................................CTCCTAAACAAACCAAACAAGCCCGGCGGGACTTCATGAAGAAAGTTCCTGAAACTAAAGTCCAAGCAACATAAGTCTCCATTGTCCTTCAATTAGACAAATTTTGGGTGA-TTTATCAAACAGTGGACACT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318843" ref_strand="+" ref_description="SGN-U318843        Tomato 200607 #1 [12 ESTs aligned] arabidopsis/peptide: | Symbol: None | expressed protein, contains Pfam PF04063: Domain of unknown function (DUF383) and PF04064: Domain of unknown function (DUF384) | chr1:4882371-4884780 REVERSE | Aliases: F14L17.6, F14L17_6(evalue: 2e-131, score=465) genbank/nr: expressed(evalue: 3e-178, score=627)">
      <seq>cgccaagtgaagaaggaagccattaaatcaaatggcgacggagctagaagaattgattgggtttctatcatccccttctcctccagtgaaaaaaatagcggttgatattgttcgtgattatactggttctgaggatggcttggaatctcttggcaagtattctaacgtcgtgcttccttctctgtctcgccttcttggtgaaaaaaaggtggtttctgaacctgcggctcaagcactggtaaatctgtcacaaaagccagagttggcaggtaagatggttgagatgcatatggttaggacatcgatggaaaccctgtacaagcaagattgtgaaatcacaagtctgctgattatgctccttgttaatcttactcagctggatgctggtattgattctttgcttcagtctgcagatgagaagatgcatggtttatatgtcatgaaacttgtgagatcattttgttcgtcctcctgtgagggaaaagttgatccctttgaacatgtggcttctgtacttgtcaacatttctaagaaggaacatgggagaaagcttctgcttgatcaaaaacgatgcctactaaagcaaatagtccgtaatgattctaagagcttgttacgaaagagaggggtcgcaggaaccatccgcaactgctgcttcgaagctgagaatcagctgcaaaatttgcttctgatttctgaattcttatggccagctctgctcctgcctgttgctggaaataaggtctatagtgaggaagacactcggaaaatgccactagagcttgcaagtgcactctcaatcgaacgagaacccgttactgatcctgaaattcgtgtacaggcgctagaggctatttatttgctcatattacaggaagctggcagaagagcattttggtcagtgaatggtccccggatattgcaagtgggctatgcagacgaggatgatcctaaagcaatggaagcatatgagcgagctggctccttgctgattcaagagagcggcctcgatgaagaattaacagatacgtcttcgttagcagagacatcttcgtagacatcctactttcttgctggttttgattctacaatagcaacgagttccaacaatcaattagacaatctgcaggttgcttaagagtagtcaagctctatagaagtggaaggtccaaagtgtactttgaattattatattttttgggtttcttgtcgccgggttagttatgatcctcttaaaggttgttatatcaaggactcgggtgatgtattcccagaggttattgttattactggataatttaaggcccgcgatacgggtccaatataattttacattttacataaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0145P19-pIKiN/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0145P19.1" temp_strand="-" temp_description="C05HBa0145P19.1  AC209589.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0145P19 sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="149595" stop="142804"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="149295" g_stop="149173" g_length="123"/>
          <reference_exon_boundary r_type="cDNA" r_start="86" r_stop="208" r_length="123" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="149172" i_stop="148218" i_length="955">
            <donor d_prob="0.957" d_score="1.00"/>
            <acceptor a_prob="0.947" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="148217" g_stop="148020" g_length="198"/>
          <reference_exon_boundary r_type="cDNA" r_start="209" r_stop="406" r_length="198" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="148019" i_stop="147178" i_length="842">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="147177" g_stop="147099" g_length="79"/>
          <reference_exon_boundary r_type="cDNA" r_start="407" r_stop="485" r_length="79" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="147098" i_stop="145774" i_length="1325">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.966" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="145773" g_stop="145631" g_length="143"/>
          <reference_exon_boundary r_type="cDNA" r_start="486" r_stop="628" r_length="143" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="145630" i_stop="145363" i_length="268">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.933" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="145362" g_stop="145249" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="629" r_stop="742" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="5">
          <gDNA_intron_boundary i_start="145248" i_stop="144343" i_length="906">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.999" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="6">
          <gDNA_exon_boundary g_start="144342" g_stop="144211" g_length="132"/>
          <reference_exon_boundary r_type="cDNA" r_start="743" r_stop="874" r_length="132" r_score="1.000"/>
        </exon>
        <intron i_serial="6">
          <gDNA_intron_boundary i_start="144210" i_stop="143673" i_length="538">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.972" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="7">
          <gDNA_exon_boundary g_start="143672" g_stop="143559" g_length="114"/>
          <reference_exon_boundary r_type="cDNA" r_start="875" r_stop="988" r_length="114" r_score="1.000"/>
        </exon>
        <intron i_serial="7">
          <gDNA_intron_boundary i_start="143558" i_stop="143461" i_length="98">
            <donor d_prob="0.902" d_score="1.00"/>
            <acceptor a_prob="0.992" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="8">
          <gDNA_exon_boundary g_start="143460" g_stop="143099" g_length="362"/>
          <reference_exon_boundary r_type="cDNA" r_start="989" r_stop="1350" r_length="362" r_score="0.989"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0145P19.1" gen_strand="-" ref_id="SGN-U318843" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>1265</cumulative_length_of_scored_exons>
        <coverage percentage="0.937" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0145P19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U318843" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="149295" e_stop="149173"/>
          <exon e_start="148217" e_stop="148020"/>
          <exon e_start="147177" e_stop="147099"/>
          <exon e_start="145773" e_stop="145631"/>
          <exon e_start="145362" e_stop="145249"/>
          <exon e_start="144342" e_stop="144211"/>
          <exon e_start="143672" e_stop="143559"/>
          <exon e_start="143460" e_stop="143099"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTGAAAAAAATAGCGGTTGATATTGTTCGTGATTATACTGGTTCTGAGGATGGCTTGGAATCTCTTGGCAAGTATTCTAACGTCGTGCTTCCTTCTCTGTCTCGCCTTCTTGGTGAAAAAAAGGTACCAGTATCTTCTAAGATGTGTGATTACACCAATAAAGTTCATGTTATGGATGCTTTTTTGTTAAAACAAATTAACCCTTTTCTTCAGAGTTATAAGTAGCATTTCAACTTTTGGAAATCCCCCCACAACAGAAAATTCATAAATAAATATATTTTTTTTACTGTTACAATGACTGGATGTTTGCAATATTTTCTGTAACATTTAAAGAATCTTACCACGGTCAAAATAGATCAGATATTTGGAAGGAGGGATTAGTTCTTATCTGTGTAAACTTGAACTGGTGTTGTTCATATTGATAGTTGTGTACACTATGCCTAACCATCCATATACTAACATGGTGATAGAGCAATGATTTAGAAACTTCTATTTTCCCCTTTTTTTGAAGGAAAAAAAAAGACTTTTGAAAACACCAAAGTTCACTGTGCAAACACTAACTCACTGCTATAGAAATGATGTTTTAAATATGACTTTTGAAAGATAAGAAACAAGCATTACGTTATAGTACCGAAGTTCACTATGCAAAGTTAAACTCAATTTTTGCAAACACTTTATTACAATTTTTTTTAGAAAGACTATACCAAAAAATTAAACTGTGCACAAAACCTTTTTTTTTAAAAAATCATTCCTAACATAACGTTATGAGCTAGAACAAGACAAAGCTGAATGAGATCTCTTGAAAATATGAACCTTTCTGAATTGATGGATACACATATGGCATCACTTTCTTTCTTGTGAAGCCCTTGTTTTCGTTGCATACTATTTGTCCGAAAATTTGACAAATTTATTGTTGATTAATTCATACCATGACCATGGTTTGTCTTCCTGAGATCTTTTATCAAACTCAATTTATTGACATGTATGTAATATTTTTCGTGTATTGATACTTATACTATGCAGTAGCCTCCAGAAAGCCTTTTTAAATTCTTTTTTTTTTATCAACAATACCATTCAGGTGGTTTCTGAACCTGCGGCTCAAGCACTGGTAAATCTGTCACAAAAGCCAGAGTTGGCAGGTAAGATGGTTGAGATGCATATGGTTAGGACATCGATGGAAACCCTGTACAAGCAAGATTGTGAAATCACAAGTCTGCTGATTATGCTCCTTGTTAATCTTACTCAGCTGGATGCTGGTATTGATTCTTTGCTTCAGGTTAATCTCATCCTTTTTTTTTCGCACCAACGCTTTAAATGCCTCTTTATTTTTTTATTTTTTATGAATTAAGGTCTTTCTTTAAAAAGGTACAAGTAGATGCAAAACTACAAAAGAAATGAAGTGCAAGATTATTAGCCCCTTTGGCCTTTACAATGTGTCAAACTAAAACTAGGGGCCCAACAAAGTGTGTCCGAACAATGTTCTAGTTAACTTAGTCCAACAAAAAAGATTAAGCAAACATCTGGCTTTGAGAGTATTGAGGTTCCACCAAACATCTTCGATCCCTTTCCCTCCACAACACCAAAACATAATTGCAGGGATCATCACCACATCTTCCTGATGGTCTTATCGACTCTCCTTAAGTTCTTCTTTACGGCAAGTTTAACTTTGAAGCTTCTAATATGTGTCATTATTCTTGTTTATATACTGTCATATAAGTTAAGAAATTGTGTTTTGTATCTTTTCTAATTGATCAATAACGGAGGAAAGTTTCCACACTTAATCTTCCCATTTGTAAATAGAATGGGACAACTTCGCAATTATTAGGTTTTGATTCTGCATTTCCCTCTTCTGTGGTCATTGAATGGCTGAAGAAAGAAATTAAAAAATGCCTGTACAGAAATTGAAGAAAATTTTGATGACTGAGACACTAGAGGAACAAGAAGAGTTCTATAGATATCTTAAAACACTTCTTACACTTTCTACCTGCTGTTAGGTTGTGGTCATTTGGTTCTCCACAATTAAAATGGCTAAGTTGAATACCGGTTTCTTTTACACCGTCATTAAAAAAATATTGGTTTCTTATGCTTATTATGCTGATTGCTTTCCGTGATTGGCAGTCTGCAGATGAGAAGATGCATGGTTTATATGTCATGAAACTTGTGAGATCATTTTGTTCGTCCTCCTGTGAGGGAAAAGGTATGTTCAATTATCGTTCTTTTTCCCTTTTATCCAGTTTGATTGTTTTGTGTGTTTAAGTGCTTTGATACTGTAGTTCCTGTCACTGTTATCAAGCACAAAAAAGCTCTAAGGTCCATTGGATCTTTAAGCGCAAATAAAGTGTGATTGAAAAAATGCACAAAGTGAGAAAAAAATACAAATATATATGTTAGTCTAAGACTAATAATTATAAGCATGAATAACAAATATATGAACAAGGAAATTCAACTTTTTTATGATAAAGTGAAATATCAATGTTTAGTGTCGTCTCTTTAGAAGAGGCTCATTGGCAAGGAAAAGTTTGTCCTAGAACCTTGATGACGTCACTGAAGCGCACATTAAGCTAGGTGAAGCGCTCAACACGTTTTGAGCCTCACTTCAGGGCTTAAGCGTGCCTTTGACTTGACAACTGGTCCATAGAACTAAGAGCGAAAATGAAACGACTACAGCTGAACTCAGATACGCCCCTGCTTAGCTTGTACAGAAAGTGAGAACCTGGAGGGTGCTTGTTTCGTGATCATTCATCCAAATTGGTTACTTGAACTAAATTGATTGCCTAGCTAGAGAACTCGACGTAAATTCACCTTAGTCAGCTCAAGATGGATAACAAATCTTAGTCAATCATTTGTTTTCTGAGAATGGTAAAATATCTAAGTCAACAAATCAGTGTTGTAAATTTTCATGGATTTCTTATCTACTTAAAGGATTGACTCAAAAACCTTGAAACCTGGAGCACAAGTTCTATCCGTAATTGGTCCACTGAGCATTAAATTTGTCCAGATGTGTGTCATGTGATTTTCTGTGTTTTATGAGAAAGGTGAATCCTCTATTGAGAAGCAAGAGACTTAGCAAACATTATGGGGAAGAAGAATCTTTTATGATTGAAGTACTTACTTCACTAAATTTTGGGTGCTATAAGACTCGGTTAGAAAATATTCGGCTGTGGATGAGCAATTATGTGTAAAGTCTGTCTGTTTTACGATAATACTAGTTGGATTCTGTCCTGGGTTTCAATCATGATAGAGCTTTTTCTCAGCATTTACTTGCTTAGGGGAAGTTAAAAGTGTAGCAAAATATATTATTTCAAGATTCTAGTACATGAAAAGTATCTTTTGGCATGTGATGTGTTGAAATGTCTGATCCTCTCATCGGAGAACTTACGTTGTTAGTGAAGACGTCCTAACTTGAATATATCTCCAAGATGATGCATGTTTAACTCAAACAAGAAATTATTGCCTTAACTTTCCGTATTATCTATTATCTTTGTCGTTATTACCACATATTTCCTTTTTCCTTGTGATCAGTTGATCCCTTTGAACATGTGGCTTCTGTACTTGTCAACATTTCTAAGAAGGAACATGGGAGAAAGCTTCTGCTTGATCAAAAACGATGCCTACTAAAGCAAATAGTCCGTAATGATTCTAAGAGCTTGTTACGAAAGAGAGGGGTATGTGGTAGGATATTTTCAGTTCAAGATGGCTATTTTCATGAATATATGGACTTCTGCTTTAAAGTTAATTATTTGAATTCAAAATGAAAAAAGGGAAATGTTTCAAATTCTGTCATCAAGCACCAATATATGTATTTAGTGCCTTCTAGAATGAGCAATTTGGCTTGATCCAGCTTTTTTATAGTATTGTTTAAAAGCTTTATTTTACAATCATGTAATAAGCAAAAGTTTAGCAGGAAAACTTGTGCACTGATTTTGGATACAGGTCGCAGGAACCATCCGCAACTGCTGCTTCGAAGCTGAGAATCAGCTGCAAAATTTGCTTCTGATTTCTGAATTCTTATGGCCAGCTCTGCTCCTGCCTGTTGCTGGAAATAAGGTGACTTTCACCTATTTAAGTTAGATGTCAATAATAATTCATTTATTTCTACAGTACACTTCAAATCTATCTGTAATTAGGACTTGAAAGAATGGATGTGTCTTTGCCTTTTACTGTCACATCACATTTCTTTGTTTCTGTTTCTTAGAACTTGTTAGAGACCTGTAAAGCTATTTTTTCCATCATCTCAAAGTCAGTATTATTATGCTCGATGGAGATCTATTATTTAATTGTTCTTCCTCTCTGATTGAAATACCTCAAGCAAGTGACGGAATAGATAAGTTCAACCAGATAATGTGAAATCCGAAAACTAAGAAATGTTGTTTGTGATCGAGAATTCACTCTGACCATCAGGTAAATGGTTCTTATTTTAATGGAATAGGAAAGCTCCCATCTTTGGTTAAGGACTGTCTACAAAGATTTCTTTCTACAAGTATACCGAGAGTTACTATGTGTATTCTTGATATCAGTGTGTCATTACTTAATGTACACAAAAGGGAATGGTTTGCTGACTGAGTGTGCTAAGCCTTAATCTGGTAACCTGAAGGCCTTAGAAGATCCATTTCAATAGAAAAACAAAGTTAGTGAGGAGCAAAGAGAATAAATTTCAAATGGGAATAAAGGTGCAGATGGCGCTGAGAATCATTTTTATTTGGTTCGCTGCTTGGTTAAAGGCTAAAAATGCTTAATTTAGATTTTCTATTAAGTTTCAAATATCTTCCATAACGGAACATTTCTTCTTTCTACCTTTTTGGAACTCTATATTATTTACTTTCTTGCTTTGTCTCCTTCCTAGTCATCTGTAGCTCGCTGTTACAAATATGTCAACTTTAATTTTCTTGTCTCAGTTCTTTATATTCCTTTCCATTTGAATTGAGTATTTTCTTCTGGGCCAACTTCTGACAGGTCTATAGTGAGGAAGACACTCGGAAAATGCCACTAGAGCTTGCAAGTGCACTCTCAATCGAACGAGAACCCGTTACTGATCCTGAAATTCGTGTACAGGCGCTAGAGGCTATTTATTTGCTCATATTACAGGTATAGTCTGAACTTATTCTCTGTATGTGCTTCATTTGCTTATCTTAATCCTTACAGCTGTGATAATAAGCAGCACATCTTATAGCTTTTCAAGATCGGAGTCTATATCCAGCCACCTGAAATAGTAGCTCCTCTTCTTCTACATAGTTGATTATCTCAAAAGTGTTTTACTTTTAGATGTGTGGATAGAAGGAACTAGGCAGCTATCGTTCTGTGTAATGGAACCATTTAATCAAGCCATTCATCACTTTTTGGAACTTAAACTATAACCACACGCACAAAAAAAGTTTTTGACCAATTGTAGAGGATGGTTGTCCAAGAACAGCACTCTTTGTTTTTGGTCCATACAAGTTTATAAAGGAAATCTTGTGTGTATGAATTGATCATTTCTTCTACTCTGTCAGATCGCCAAATCATTGTACCATTAGTAGTTCACGAATCCCTTCTACTTGCTAGTTGCTGCGTTTGTCCTATCAAACAACAGATTTTATTGTCCGGGGAAGCTTTCCTCTGTATGATATGCTCGAATTGATTGTAGGAAGCTGGCAGAAGAGCATTTTGGTCAGTGAATGGTCCCCGGATATTGCAAGTGGGCTATGCAGACGAGGATGATCCTAAAGCAATGGAAGCATATGAGCGAGCTGGCTCCTTGGTATTTCCAAACTGCAGCCTATCATCCGTCAAGTCTCTTCTGTCATATGAAATATATCTTTTCACTGTCCTAACCTGAATTCTTCTGAATGTTAACAGCTGATTCAAGAGAGCGGCCTCGATGAAGAATTAACAGATACGTCTTCGTTAGCAGAGACATCTTCGTAGACATCCTACTTTCTTGCTGGTTTTGATTCTACAATAGCAACGAGTTCCAACAATCAATTAGACAATCTGCAGGTTGCTTAAGAGTAGTCAAGCTCTATAGAAGTGGAAGGTCCAAAGTGTACTTTGAATTATTATATTTTTTGGGTTTCTTGTCGCCGGGTTAGTTATGATCCTCTTAAAGGTTGTTATATCAAGGACTCGGGTGATGTATTCCCAGAGGTTATTGTTATTACTGGATAATTTAAGGCCCGCGATACGGGTCCAATATAATTTTACATTTTACATAAATTCAC</genome_strand>
        <mrna_strand>GTGAAAAAAATAGCGGTTGATATTGTTCGTGATTATACTGGTTCTGAGGATGGCTTGGAATCTCTTGGCAAGTATTCTAACGTCGTGCTTCCTTCTCTGTCTCGCCTTCTTGGTGAAAAAAAG...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGTTTCTGAACCTGCGGCTCAAGCACTGGTAAATCTGTCACAAAAGCCAGAGTTGGCAGGTAAGATGGTTGAGATGCATATGGTTAGGACATCGATGGAAACCCTGTACAAGCAAGATTGTGAAATCACAAGTCTGCTGATTATGCTCCTTGTTAATCTTACTCAGCTGGATGCTGGTATTGATTCTTTGCTTCAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TCTGCAGATGAGAAGATGCATGGTTTATATGTCATGAAACTTGTGAGATCATTTTGTTCGTCCTCCTGTGAGGGAAAAG.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTGATCCCTTTGAACATGTGGCTTCTGTACTTGTCAACATTTCTAAGAAGGAACATGGGAGAAAGCTTCTGCTTGATCAAAAACGATGCCTACTAAAGCAAATAGTCCGTAATGATTCTAAGAGCTTGTTACGAAAGAGAGGG............................................................................................................................................................................................................................................................................GTCGCAGGAACCATCCGCAACTGCTGCTTCGAAGCTGAGAATCAGCTGCAAAATTTGCTTCTGATTTCTGAATTCTTATGGCCAGCTCTGCTCCTGCCTGTTGCTGGAAATAAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTCTATAGTGAGGAAGACACTCGGAAAATGCCACTAGAGCTTGCAAGTGCACTCTCAATCGAACGAGAACCCGTTACTGATCCTGAAATTCGTGTACAGGCGCTAGAGGCTATTTATTTGCTCATATTACAG..........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GAAGCTGGCAGAAGAGCATTTTGGTCAGTGAATGGTCCCCGGATATTGCAAGTGGGCTATGCAGACGAGGATGATCCTAAAGCAATGGAAGCATATGAGCGAGCTGGCTCCTTG..................................................................................................CTGATTCAAGAGAGCGGCCTCGATGAAGAATTAACAGATACGTCTTCGTTAGCAGAGACATCTTCGTAGACATCCTACTTTCTTGCTGGTTTTGATTCTACAATAGCAACGAGTTCCAACAATCAATTAGACAATCTGCAGGTTGCTTAAGAGTAGTCAAGCTCTATAGAAGTGGAAGGTCCAAAGTGTACTTTGAATTATTATATTTTTTGGGTTTCTTGTCGCCGGGTTAGTTATGATCCTCTTAAAGGTTGTTATATCAAGGACTCGGGTGATGTATTCCCAGAGGTTATTGTTATTACTGGATAATTTAAGGCCCGCGATACGGGTCCAATATAATTTTACATTTTACATAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>24</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="12" PGL_stop="1259"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="12" e_stop="178"/>
            <exon e_start="537" e_stop="1259"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.920" e_score="0.910"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.910">
            <gDNA_exon_boundary e_start="12" e_stop="178" e_length="167"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.920">
            <gDNA_intron_boundary i_start="179" i_stop="536" i_length="358"/>
          </intron>
          <exon e_serial="2" e_score="0.989">
            <gDNA_exon_boundary e_start="537" e_stop="1259" e_length="723"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="12" stop="178"/>
              <exon start="537" stop="1259"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U329489" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCTGATCTTATGGCGGCTGGGAAAAGTTTTTGTGAAGAGGACTGGTCAAGTTTGAAAAGCAAATACCCCTCCCTTCAAGAGGAGGACTTGCATCGTTATTGCTTCTCTTCAGCGTATATATTGGCATTACTTCATGATAGTCTTGGAATTGCTTTGGATGATGATAG : GATTGGATATGCTAATCAAGTTGAAAACATTCCACTTGATTGGGCATTGGGAGCATTCATCTTGCAGAGCACAGCTGAGTTGGACAAAGAGCATTCTGGGTGGTTTGCAAATATGTTCAGTGAGGACTCTCTCATTTTGCTTCTCTTCTTTGCCTTTTTCATTTTGGTGATGTTCACCGCATGGTATGTGTCAAAGTGGAGAAAGCCACAATTGAAGACTGTGTATGATCTAGAGAAAGGAAAGTACATAGTCACACGTGTTGGTAGATGTTCATAGATTGTTTTATAGGAGTAGAAGCCATTTTCCTGCATCTGTGGATAAGGCGGAAGGACCAAAGTAGATCATCAACTACCTCATCCAAGAATCTCTGCACACTTTGTTGCTTGGTACCCCGAGCTAAAGATGCTATACTTAGGCGAAGTCAGATCAATCTTATGGGACTGTAGCTACCCAACTCAAGAAGGTGTCTCGGTCTCTATTTATTGTTATGAAGCAGAAAATCTTCCTGTAAGAATGTTATAGTCGGTATGAGGAAGCAGATATACTAGAAACTTAGAAGAGCTCGTCTTGTTTGGTTGCTCACCAAGTATACCATTTACACTATAGTCATTACTCATTAACATATTTCCTTCACAAAGTAGTTGCCTGTATCCATCCCCTGGAGGGGGGTTGGTGTAGAACTGAAGATTTCTCATGGGTGGTAAATAATTTGAATTTATTCT</gDNA_template>
            <first_frame> S  D  L  M  A  A  G  K  S  F  C  E  E  D  W  S  S  L  K  S  K  Y  P  S  L  Q  E  E  D  L  H  R  Y  C  F  S  S  A  Y  I  L  A  L  L  H  D  S  L  G  I  A  L  D  D  D  R :   I  G  Y  A  N  Q  V  E  N  I  P  L  D  W  A  L  G  A  F  I  L  Q  S  T  A  E  L  D  K  E  H  S  G  W  F  A  N  M  F  S  E  D  S  L  I  L  L  L  F  F  A  F  F  I  L  V  M  F  T  A  W  Y  V  S  K  W  R  K  P  Q  L  K  T  V  Y  D  L  E  K  G  K  Y  I  V  T  R  V  G  R  C  S  *  I  V  L  *  E  *  K  P  F  S  C  I  C  G  *  G  G  R  T  K  V  D  H  Q  L  P  H  P  R  I  S  A  H  F  V  A  W  Y  P  E  L  K  M  L  Y  L  G  E  V  R  S  I  L  W  D  C  S  Y  P  T  Q  E  G  V  S  V  S  I  Y  C  Y  E  A  E  N  L  P  V  R  M  L  *  S  V  *  G  S  R  Y  T  R  N  L  E  E  L  V  L  F  G  C  S  P  S  I  P  F  T  L  *  S  L  L  I  N  I  F  P  S  Q  S  S  C  L  Y  P  S  P  G  G  G  L  V  *  N  *  R  F  L  M  G  G  K  *  F  E  F  I   </first_frame>
            <second_frame>  L  I  L  W  R  L  G  K  V  F  V  K  R  T  G  Q  V  *  K  A  N  T  P  P  F  K  R  R  T  C  I  V  I  A  S  L  Q  R  I  Y  W  H  Y  F  M  I  V  L  E  L  L  W  M  M  I   : G  L  D  M  L  I  K  L  K  T  F  H  L  I  G  H  W  E  H  S  S  C  R  A  Q  L  S  W  T  K  S  I  L  G  G  L  Q  I  C  S  V  R  T  L  S  F  C  F  S  S  L  P  F  S  F  W  *  C  S  P  H  G  M  C  Q  S  G  E  S  H  N  *  R  L  C  M  I  *  R  K  E  S  T  *  S  H  V  L  V  D  V  H  R  L  F  Y  R  S  R  S  H  F  P  A  S  V  D  K  A  E  G  P  K  *  I  I  N  Y  L  I  Q  E  S  L  H  T  L  L  L  G  T  P  S  *  R  C  Y  T  *  A  K  S  D  Q  S  Y  G  T  V  A  T  Q  L  K  K  V  S  R  S  L  F  I  V  M  K  Q  K  I  F  L  *  E  C  Y  S  R  Y  E  E  A  D  I  L  E  T  *  K  S  S  S  C  L  V  A  H  Q  V  Y  H  L  H  Y  S  H  Y  S  L  T  Y  F  L  H  K  V  V  A  C  I  H  P  L  E  G  G  W  C  R  T  E  D  F  S  W  V  V  N  N  L  N  L  F  </second_frame>
            <third_frame>   *  S  Y  G  G  W  E  K  F  L  *  R  G  L  V  K  F  E  K  Q  I  P  L  P  S  R  G  G  L  A  S  L  L  L  L  F  S  V  Y  I  G  I  T  S  *  *  S  W  N  C  F  G  *  *  *  :  D  W  I  C  *  S  S  *  K  H  S  T  *  L  G  I  G  S  I  H  L  A  E  H  S  *  V  G  Q  R  A  F  W  V  V  C  K  Y  V  Q  *  G  L  S  H  F  A  S  L  L  C  L  F  H  F  G  D  V  H  R  M  V  C  V  K  V  E  K  A  T  I  E  D  C  V  *  S  R  E  R  K  V  H  S  H  T  C  W  *  M  F  I  D  C  F  I  G  V  E  A  I  F  L  H  L  W  I  R  R  K  D  Q  S  R  S  S  T  T  S  S  K  N  L  C  T  L  C  C  L  V  P  R  A  K  D  A  I  L  R  R  S  Q  I  N  L  M  G  L  *  L  P  N  S  R  R  C  L  G  L  Y  L  L  L  *  S  R  K  S  S  C  K  N  V  I  V  G  M  R  K  Q  I  Y  *  K  L  R  R  A  R  L  V  W  L  L  T  K  Y  T  I  Y  T  I  V  I  T  H  *  H  I  S  F  T  K  *  L  P  V  S  I  P  W  R  G  V  G  V  E  L  K  I  S  H  G  W  *  I  I  *  I  Y  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="12" stop="178"/>
                    <exon start="537" stop="813"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>441</number_coding_nucleotides>
                  <number_encoded_amino_acids>147</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SDLMAAGKSFCEEDWSSLKSKYPSLQEEDLHRYCFSSAYILALLHDSLGIALDDDRIGYANQVENIPLDWALGAFILQSTAELDKEHSGWFANMFSEDSLILLLFFAFFILVMFTAWYVSKWRKPQLKTVYDLEKGKYIVTRVGRCS*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="859" stop="1059"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>198</number_coding_nucleotides>
                  <number_encoded_amino_acids>66</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GGRTKVDHQLPHPRISAHFVAWYPELKMLYLGEVRSILWDCSYPTQEGVSVSIYCYEAENLPVRML*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="2206" PGL_stop="9514"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2206" e_stop="2417"/>
            <exon e_start="2707" e_stop="2998"/>
            <exon e_start="3894" e_stop="3965"/>
            <exon e_start="4589" e_stop="4653"/>
            <exon e_start="5131" e_stop="5287"/>
            <exon e_start="5690" e_stop="5773"/>
            <exon e_start="5860" e_stop="5949"/>
            <exon e_start="6077" e_stop="6392"/>
            <exon e_start="9470" e_stop="9514"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.933" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.237" e_score="1.000"/>
          <exon-intron don_prob="0.988" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.448" e_score="0.991"/>
          <exon-only e_score="0.578"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="2206" e_stop="2417" e_length="212"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.000">
            <gDNA_intron_boundary i_start="2418" i_stop="2706" i_length="289"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2707" e_stop="2998" e_length="292"/>
          </exon>
          <intron i_serial="2" don_prob="0.933" acc_prob="0.998">
            <gDNA_intron_boundary i_start="2999" i_stop="3893" i_length="895"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="3894" e_stop="3965" e_length="72"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.996">
            <gDNA_intron_boundary i_start="3966" i_stop="4588" i_length="623"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="4589" e_stop="4653" e_length="65"/>
          </exon>
          <intron i_serial="4" don_prob="0.988" acc_prob="0.998">
            <gDNA_intron_boundary i_start="4654" i_stop="5130" i_length="477"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="5131" e_stop="5287" e_length="157"/>
          </exon>
          <intron i_serial="5" don_prob="0.998" acc_prob="0.991">
            <gDNA_intron_boundary i_start="5288" i_stop="5689" i_length="402"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="5690" e_stop="5773" e_length="84"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.237">
            <gDNA_intron_boundary i_start="5774" i_stop="5859" i_length="86"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="5860" e_stop="5949" e_length="90"/>
          </exon>
          <intron i_serial="7" don_prob="0.988" acc_prob="0.997">
            <gDNA_intron_boundary i_start="5950" i_stop="6076" i_length="127"/>
          </intron>
          <exon e_serial="8" e_score="0.991">
            <gDNA_exon_boundary e_start="6077" e_stop="6392" e_length="316"/>
          </exon>
          <intron i_serial="8" don_prob="0.000" acc_prob="0.448">
            <gDNA_intron_boundary i_start="6393" i_stop="9469" i_length="3077"/>
          </intron>
          <exon e_serial="9" e_score="0.578">
            <gDNA_exon_boundary e_start="9470" e_stop="9514" e_length="45"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2206" stop="2417"/>
              <exon start="2707" stop="2998"/>
              <exon start="3894" stop="3965"/>
              <exon start="4589" stop="4653"/>
              <exon start="5131" stop="5287"/>
              <exon start="5690" stop="5773"/>
              <exon start="5860" stop="5949"/>
              <exon start="6077" stop="6392"/>
              <exon start="9470" stop="9514"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U317433" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTTTTTTTTTTAACAAGGAAGAAAGCTTAGACCAAAAAAGTGTAGAAAACAACAAACAAACCGCAATAGTTTGGTATTTTTTTCGGAAAAATCTAAGATAAATACTATAATTTAGCAAACACCCTTCAATTTGTTCCGCTATAAATCCGCAGAAATTTTTGGGTTTTTTTCTTTCTCTTTCCATTTGCTGAATTTCTTCATTTTCCCAG : GAATTGTGTTACTTTTTTTATCTGGGTTTTTACAATGGGAGATTGTTTGGTGGTGCATACGGATCGTATTGTGAAGGCTAATGGAGCTGAGATTATGGATGGGAAGAATCCTGAAATGGTAGGGTCTTCGTCGGCAATAGCTGTAGATGAGAAGAAGGTGCTGGAGGAGGAGGAGGAGGAGGAGGGTGATGAGGAGGTGCCGTTAATTGGTAGAGCAGAGTGCAGGATTTGCCAGGAGGAGGATTCTTTGGACAAGTTGGAGAGCCCATGTGCTTGCAGTGGAAGTCTCAAG : TACACACACCGAGCATGCGTTCAACACTGGTGCAATGAGAAGGGGGATATTACTTGTGAGATTTGCCATCAG : CAATACCAGCCTGGTTACACTGTTCCTCCTCGACCTGTGGCTGAGGAGACAATTATTGATATTGG : GGGAGGATGGCAAATCTCTGGTACCCCTTTGAATTTACATGATCCTCGCGTCTTGGCAATTGCAGAGGCTGAACGCCAACTTCTGGAAGCTGAATATGATGATTACAATTCTGCAAATGCAAGTGGTGCAGCTTTCTTTCGATCGGCTGCTTTAATT : TTGATGGCTCTTCTACTATTGCGCCATGCATTACCAATGACAGATACAGATGGAGATGATGAAGATCCAACTGCTTTCTTTTCG : CTTTTCTTACTCCGGGCAGTTGGCTTTCTTTTACCCTGCTACATCATGCTCTGGGCCATCAGCATCTTGCAGCAGCGCAGACAAAGAGAG : GAAGCTGCAGCATTGGCAGCAACACAATTTGCAGTTGTGTTACACTCTGGACAGCCGAGAAGTGTACAGTTTACCATAGCTTCAGCTGCACCAGCAACACCAGCAGCGCCTGCTTCAGTGGATAATGTTTAAACAACAAGATGATCGTGCTTGATCTCTTATTTTGAAGCTAAATACTGCCTTATGCTAGATTTGTTTGTCTGTTATCATATTTCATATATTATTATATGGGGAAGTTCGAAAATGAATTGTTGTATTACCATTTTGCCCCCCTTTACTGTTTTAAAAATTTGATTAAATATAAATATTTTTAATT : ACTAAAAAAGAAAAGCATAAAGAAACAGATTTCGCACAAGAAACC</gDNA_template>
            <first_frame> F  F  F  F  L  T  R  K  K  A  *  T  K  K  V  *  K  T  T  N  K  P  Q  *  F  G  I  F  F  G  K  I  *  D  K  Y  Y  N  L  A  N  T  L  Q  F  V  P  L  *  I  R  R  N  F  W  V  F  F  F  L  F  P  F  A  E  F  L  H  F  P  R :   N  C  V  T  F  F  I  W  V  F  T  M  G  D  C  L  V  V  H  T  D  R  I  V  K  A  N  G  A  E  I  M  D  G  K  N  P  E  M  V  G  S  S  S  A  I  A  V  D  E  K  K  V  L  E  E  E  E  E  E  E  G  D  E  E  V  P  L  I  G  R  A  E  C  R  I  C  Q  E  E  D  S  L  D  K  L  E  S  P  C  A  C  S  G  S  L  K  :  Y  T  H  R  A  C  V  Q  H  W  C  N  E  K  G  D  I  T  C  E  I  C  H  Q  :  Q  Y  Q  P  G  Y  T  V  P  P  R  P  V  A  E  E  T  I  I  D  I  G :   G  G  W  Q  I  S  G  T  P  L  N  L  H  D  P  R  V  L  A  I  A  E  A  E  R  Q  L  L  E  A  E  Y  D  D  Y  N  S  A  N  A  S  G  A  A  F  F  R  S  A  A  L  I  :  L  M  A  L  L  L  L  R  H  A  L  P  M  T  D  T  D  G  D  D  E  D  P  T  A  F  F  S  :  L  F  L  L  R  A  V  G  F  L  L  P  C  Y  I  M  L  W  A  I  S  I  L  Q  Q  R  R  Q  R  E  :  E  A  A  A  L  A  A  T  Q  F  A  V  V  L  H  S  G  Q  P  R  S  V  Q  F  T  I  A  S  A  A  P  A  T  P  A  A  P  A  S  V  D  N  V  *  T  T  R  *  S  C  L  I  S  Y  F  E  A  K  Y  C  L  M  L  D  L  F  V  C  Y  H  I  S  Y  I  I  I  W  G  S  S  K  M  N  C  C  I  T  I  L  P  P  F  T  V  L  K  I  *  L  N  I  N  I  F  N   : Y  *  K  R  K  A  *  R  N  R  F  R  T  R  N  </first_frame>
            <second_frame>  F  F  F  F  *  Q  G  R  K  L  R  P  K  K  C  R  K  Q  Q  T  N  R  N  S  L  V  F  F  S  E  K  S  K  I  N  T  I  I  *  Q  T  P  F  N  L  F  R  Y  K  S  A  E  I  F  G  F  F  S  F  S  F  H  L  L  N  F  F  I  F  P   : G  I  V  L  L  F  L  S  G  F  L  Q  W  E  I  V  W  W  C  I  R  I  V  L  *  R  L  M  E  L  R  L  W  M  G  R  I  L  K  W  *  G  L  R  R  Q  *  L  *  M  R  R  R  C  W  R  R  R  R  R  R  R  V  M  R  R  C  R  *  L  V  E  Q  S  A  G  F  A  R  R  R  I  L  W  T  S  W  R  A  H  V  L  A  V  E  V  S  S :   T  H  T  E  H  A  F  N  T  G  A  M  R  R  G  I  L  L  V  R  F  A  I  S :   N  T  S  L  V  T  L  F  L  L  D  L  W  L  R  R  Q  L  L  I  L   : G  E  D  G  K  S  L  V  P  L  *  I  Y  M  I  L  A  S  W  Q  L  Q  R  L  N  A  N  F  W  K  L  N  M  M  I  T  I  L  Q  M  Q  V  V  Q  L  S  F  D  R  L  L  *  F :   *  W  L  F  Y  Y  C  A  M  H  Y  Q  *  Q  I  Q  M  E  M  M  K  I  Q  L  L  S  F  R :   F  S  Y  S  G  Q  L  A  F  F  Y  P  A  T  S  C  S  G  P  S  A  S  C  S  S  A  D  K  E  R :   K  L  Q  H  W  Q  Q  H  N  L  Q  L  C  Y  T  L  D  S  R  E  V  Y  S  L  P  *  L  Q  L  H  Q  Q  H  Q  Q  R  L  L  Q  W  I  M  F  K  Q  Q  D  D  R  A  *  S  L  I  L  K  L  N  T  A  L  C  *  I  C  L  S  V  I  I  F  H  I  L  L  Y  G  E  V  R  K  *  I  V  V  L  P  F  C  P  P  L  L  F  *  K  F  D  *  I  *  I  F  L  I  :  T  K  K  E  K  H  K  E  T  D  F  A  Q  E  T </second_frame>
            <third_frame>   F  F  F  F  N  K  E  E  S  L  D  Q  K  S  V  E  N  N  K  Q  T  A  I  V  W  Y  F  F  R  K  N  L  R  *  I  L  *  F  S  K  H  P  S  I  C  S  A  I  N  P  Q  K  F  L  G  F  F  L  S  L  S  I  C  *  I  S  S  F  S  Q  :  E  L  C  Y  F  F  Y  L  G  F  Y  N  G  R  L  F  G  G  A  Y  G  S  Y  C  E  G  *  W  S  *  D  Y  G  W  E  E  S  *  N  G  R  V  F  V  G  N  S  C  R  *  E  E  G  A  G  G  G  G  G  G  G  G  *  *  G  G  A  V  N  W  *  S  R  V  Q  D  L  P  G  G  G  F  F  G  Q  V  G  E  P  M  C  L  Q  W  K  S  Q   : V  H  T  P  S  M  R  S  T  L  V  Q  *  E  G  G  Y  Y  L  *  D  L  P  S   : A  I  P  A  W  L  H  C  S  S  S  T  C  G  *  G  D  N  Y  *  Y  W  :  G  R  M  A  N  L  W  Y  P  F  E  F  T  *  S  S  R  L  G  N  C  R  G  *  T  P  T  S  G  S  *  I  *  *  L  Q  F  C  K  C  K  W  C  S  F  L  S  I  G  C  F  N   : F  D  G  S  S  T  I  A  P  C  I  T  N  D  R  Y  R  W  R  *  *  R  S  N  C  F  L  F   : A  F  L  T  P  G  S  W  L  S  F  T  L  L  H  H  A  L  G  H  Q  H  L  A  A  A  Q  T  K  R   : G  S  C  S  I  G  S  N  T  I  C  S  C  V  T  L  W  T  A  E  K  C  T  V  Y  H  S  F  S  C  T  S  N  T  S  S  A  C  F  S  G  *  C  L  N  N  K  M  I  V  L  D  L  L  F  *  S  *  I  L  P  Y  A  R  F  V  C  L  L  S  Y  F  I  Y  Y  Y  M  G  K  F  E  N  E  L  L  Y  Y  H  F  A  P  L  Y  C  F  K  N  L  I  K  Y  K  Y  F  *  L :   L  K  K  K  S  I  K  K  Q  I  S  H  K  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2353" stop="2417"/>
                    <exon start="2707" stop="2998"/>
                    <exon start="3894" stop="3965"/>
                    <exon start="4589" stop="4653"/>
                    <exon start="5131" stop="5287"/>
                    <exon start="5690" stop="5773"/>
                    <exon start="5860" stop="5949"/>
                    <exon start="6077" stop="6208"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>954</number_coding_nucleotides>
                  <number_encoded_amino_acids>318</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IRRNFWVFFFLFPFAEFLHFPRNCVTFFIWVFTMGDCLVVHTDRIVKANGAEIMDGKNPEMVGSSSAIAVDEKKVLEEEEEEEGDEEVPLIGRAECRICQEEDSLDKLESPCACSGSLKYTHRACVQHWCNEKGDITCEICHQQYQPGYTVPPRPVAEETIIDIGGGWQISGTPLNLHDPRVLAIAEAERQLLEAEYDDYNSANASGAAFFRSAALILMALLLLRHALPMTDTDGDDEDPTAFFSLFLLRAVGFLLPCYIMLWAISILQQRRQREEAAALAATQFAVVLHSGQPRSVQFTIASAAPATPAAPASVDNV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="14145" PGL_stop="13422"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="14145" e_stop="13683"/>
            <exon e_start="13535" e_stop="13422"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="14145" e_stop="13683" e_length="463"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="13682" i_stop="13536" i_length="147"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13535" e_stop="13422" e_length="114"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="14145" stop="13683"/>
              <exon start="13535" stop="13422"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346551" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACATGTAGAATCCCTACCATATCTTGTATTCATCTCCGCGTTGAGTCTCGAGAAATTGAAAGTATCCTACTTTATACTGGGCTCTCAACACTTATCAAACATTTCTCAGCTTCGGAAACTTCAAGAACTCGAACTGAATTTTGTTGAATTTGAGGGTGAAAAATGGGAAGTGAGGGAAGACGAGTTCGTTGAACTCAAAGTTTTGAAAATAGTGAACTGCTCCAGTTTTAGAGAATGGACTGTCTCCGATGATGCATTTTCTAACCTTCAACACATGTTTCTGCGTTGTTGTCAGTCACTTGTGGAGATCCCTTCTTGGTTCGCAGAAATTCATTCTCTAAAGTACATTGAGGTGGATAATTGCAATGGATCTGTTGTTGAATCAGCCAGGACTATCCAAAACACAAAAGTTGAAGATTATGATGTTGATTTGGAGCTCGTCATCAAGACTCATAATTCAG : ATGGTGTTACTGGAAGGTAACTGTAAGCTGCGTGGACATAAGGTTCTATCTAGTATATATGTTGGACACAACAATTATCTTAATTGGTTTACCAGACACGTCGATCAGTCTCCA</gDNA_template>
            <first_frame> E  H  V  E  S  L  P  Y  L  V  F  I  S  A  L  S  L  E  K  L  K  V  S  Y  F  I  L  G  S  Q  H  L  S  N  I  S  Q  L  R  K  L  Q  E  L  E  L  N  F  V  E  F  E  G  E  K  W  E  V  R  E  D  E  F  V  E  L  K  V  L  K  I  V  N  C  S  S  F  R  E  W  T  V  S  D  D  A  F  S  N  L  Q  H  M  F  L  R  C  C  Q  S  L  V  E  I  P  S  W  F  A  E  I  H  S  L  K  Y  I  E  V  D  N  C  N  G  S  V  V  E  S  A  R  T  I  Q  N  T  K  V  E  D  Y  D  V  D  L  E  L  V  I  K  T  H  N  S   : D  G  V  T  G  R  *  L  *  A  A  W  T  *  G  S  I  *  Y  I  C  W  T  Q  Q  L  S  *  L  V  Y  Q  T  R  R  S  V  S  </first_frame>
            <second_frame>  N  M  *  N  P  Y  H  I  L  Y  S  S  P  R  *  V  S  R  N  *  K  Y  P  T  L  Y  W  A  L  N  T  Y  Q  T  F  L  S  F  G  N  F  K  N  S  N  *  I  L  L  N  L  R  V  K  N  G  K  *  G  K  T  S  S  L  N  S  K  F  *  K  *  *  T  A  P  V  L  E  N  G  L  S  P  M  M  H  F  L  T  F  N  T  C  F  C  V  V  V  S  H  L  W  R  S  L  L  G  S  Q  K  F  I  L  *  S  T  L  R  W  I  I  A  M  D  L  L  L  N  Q  P  G  L  S  K  T  Q  K  L  K  I  M  M  L  I  W  S  S  S  S  R  L  I  I  Q  :  M  V  L  L  E  G  N  C  K  L  R  G  H  K  V  L  S  S  I  Y  V  G  H  N  N  Y  L  N  W  F  T  R  H  V  D  Q  S  P </second_frame>
            <third_frame>   T  C  R  I  P  T  I  S  C  I  H  L  R  V  E  S  R  E  I  E  S  I  L  L  Y  T  G  L  S  T  L  I  K  H  F  S  A  S  E  T  S  R  T  R  T  E  F  C  *  I  *  G  *  K  M  G  S  E  G  R  R  V  R  *  T  Q  S  F  E  N  S  E  L  L  Q  F  *  R  M  D  C  L  R  *  C  I  F  *  P  S  T  H  V  S  A  L  L  S  V  T  C  G  D  P  F  L  V  R  R  N  S  F  S  K  V  H  *  G  G  *  L  Q  W  I  C  C  *  I  S  Q  D  Y  P  K  H  K  S  *  R  L  *  C  *  F  G  A  R  H  Q  D  S  *  F  R :   W  C  Y  W  K  V  T  V  S  C  V  D  I  R  F  Y  L  V  Y  M  L  D  T  T  I  I  L  I  G  L  P  D  T  S  I  S  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="14145" stop="13683"/>
                    <exon start="13535" stop="13516"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EHVESLPYLVFISALSLEKLKVSYFILGSQHLSNISQLRKLQELELNFVEFEGEKWEVREDEFVELKVLKIVNCSSFREWTVSDDAFSNLQHMFLRCCQSLVEIPSWFAEIHSLKYIEVDNCNGSVVESARTIQNTKVEDYDVDLELVIKTHNSDGVTGR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="-" PGL_start="25214" PGL_stop="24346"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="25214" e_stop="24694"/>
            <exon e_start="24546" e_stop="24346"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.968" acc_prob="0.995" e_score="0.994"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.994">
            <gDNA_exon_boundary e_start="25214" e_stop="24694" e_length="521"/>
          </exon>
          <intron i_serial="1" don_prob="0.968" acc_prob="0.995">
            <gDNA_intron_boundary i_start="24693" i_stop="24547" i_length="147"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="24546" e_stop="24346" e_length="201"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="25214" stop="24694"/>
              <exon start="24546" stop="24346"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U341018" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTTAGCAAACTTAATAAGCTTGAAATGCTCAAGATTTCTTCTGGTGAACAATTGACCTGGATCAATGATTTGAACATCCCAAGAAACTTGAAGAAGTTGACACTGTCCTATTTCCGGATAGATCTTAATGAAGTCGCAACCCTTTCAAATCTTGAGGTACTCAAGCTGCTAGAAGTTACCATTAGATCCAATGTATGGGAAGTGAACGATGAGCAGTTCCTTCGACTCAGAATCTTGAAACTAGAAAATCCTTCTTTTTCAAGATGGTATGCCTCAGATGATGCCTTTCCATGCCTTGAACGCTTGGAACTGAAAAGATGCCAGCACCTCAAGAACATCCCTTATTGTTTTGAGCATTCTTCGTCCCTGAAATCGCTTAAGATTATATCCTGCAATGACATGCTTGCCAATTCAGTCATGCAAACCAAAGAATCATCAAAGTATTTGCACGGAGCTTCTGGTTTCGAGGTCTTCATCCACTAGTATAACAGTAACAACTCAACTCTCAAATTGGTTATCAG : GTGAGTCTCGAGCTATTTGGAGCTAAACCATAGTTAAACGAGCAGGGAAACGACCAAACCAAGGAAATAAATATTCTGAAGTGTATTCAATGATCTGTTCATGATTAACTAATAATTGGAAATTATTATGCGATGATTGGACTATGAAACGATATTCATAGTAAAAATTATTATGCAATGATTTGTTCTATGTTGATCAAA</gDNA_template>
            <first_frame> F  S  K  L  N  K  L  E  M  L  K  I  S  S  G  E  Q  L  T  W  I  N  D  L  N  I  P  R  N  L  K  K  L  T  L  S  Y  F  R  I  D  L  N  E  V  A  T  L  S  N  L  E  V  L  K  L  L  E  V  T  I  R  S  N  V  W  E  V  N  D  E  Q  F  L  R  L  R  I  L  K  L  E  N  P  S  F  S  R  W  Y  A  S  D  D  A  F  P  C  L  E  R  L  E  L  K  R  C  Q  H  L  K  N  I  P  Y  C  F  E  H  S  S  S  L  K  S  L  K  I  I  S  C  N  D  M  L  A  N  S  V  M  Q  T  K  E  S  S  K  Y  L  H  G  A  S  G  F  E  V  F  I  H  *  Y  N  S  N  N  S  T  L  K  L  V  I  R :   *  V  S  S  Y  L  E  L  N  H  S  *  T  S  R  E  T  T  K  P  R  K  *  I  F  *  S  V  F  N  D  L  F  M  I  N  *  *  L  E  I  I  M  R  *  L  D  Y  E  T  I  F  I  V  K  I  I  M  Q  *  F  V  L  C  *  S   </first_frame>
            <second_frame>  L  A  N  L  I  S  L  K  C  S  R  F  L  L  V  N  N  *  P  G  S  M  I  *  T  S  Q  E  T  *  R  S  *  H  C  P  I  S  G  *  I  L  M  K  S  Q  P  F  Q  I  L  R  Y  S  S  C  *  K  L  P  L  D  P  M  Y  G  K  *  T  M  S  S  S  F  D  S  E  S  *  N  *  K  I  L  L  F  Q  D  G  M  P  Q  M  M  P  F  H  A  L  N  A  W  N  *  K  D  A  S  T  S  R  T  S  L  I  V  L  S  I  L  R  P  *  N  R  L  R  L  Y  P  A  M  T  C  L  P  I  Q  S  C  K  P  K  N  H  Q  S  I  C  T  E  L  L  V  S  R  S  S  S  T  S  I  T  V  T  T  Q  L  S  N  W  L  S   : G  E  S  R  A  I  W  S  *  T  I  V  K  R  A  G  K  R  P  N  Q  G  N  K  Y  S  E  V  Y  S  M  I  C  S  *  L  T  N  N  W  K  L  L  C  D  D  W  T  M  K  R  Y  S  *  *  K  L  L  C  N  D  L  F  Y  V  D  Q  </second_frame>
            <third_frame>   *  Q  T  *  *  A  *  N  A  Q  D  F  F  W  *  T  I  D  L  D  Q  *  F  E  H  P  K  K  L  E  E  V  D  T  V  L  F  P  D  R  S  *  *  S  R  N  P  F  K  S  *  G  T  Q  A  A  R  S  Y  H  *  I  Q  C  M  G  S  E  R  *  A  V  P  S  T  Q  N  L  E  T  R  K  S  F  F  F  K  M  V  C  L  R  *  C  L  S  M  P  *  T  L  G  T  E  K  M  P  A  P  Q  E  H  P  L  L  F  *  A  F  F  V  P  E  I  A  *  D  Y  I  L  Q  *  H  A  C  Q  F  S  H  A  N  Q  R  I  I  K  V  F  A  R  S  F  W  F  R  G  L  H  P  L  V  *  Q  *  Q  L  N  S  Q  I  G  Y  Q  :  V  S  L  E  L  F  G  A  K  P  *  L  N  E  Q  G  N  D  Q  T  K  E  I  N  I  L  K  C  I  Q  *  S  V  H  D  *  L  I  I  G  N  Y  Y  A  M  I  G  L  *  N  D  I  H  S  K  N  Y  Y  A  M  I  C  S  M  L  I  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="25214" stop="24732"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>480</number_coding_nucleotides>
                  <number_encoded_amino_acids>160</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FSKLNKLEMLKISSGEQLTWINDLNIPRNLKKLTLSYFRIDLNEVATLSNLEVLKLLEVTIRSNVWEVNDEQFLRLRILKLENPSFSRWYASDDAFPCLERLELKRCQHLKNIPYCFEHSSSLKSLKIISCNDMLANSVMQTKESSKYLHGASGFEVFIH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="-" PGL_start="26373" PGL_stop="25600"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="26373" e_stop="25886"/>
            <exon e_start="25803" e_stop="25600"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="26373" e_stop="25886" e_length="488"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.992">
            <gDNA_intron_boundary i_start="25885" i_stop="25804" i_length="82"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="25803" e_stop="25600" e_length="204"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26373" stop="25886"/>
              <exon start="25803" stop="25600"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U330892" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGGTTTTAGAGGATGTTGGAAGAAGCATAGCACAAAAGTGTCAAGGGCTGCCCCTATCAATTGTTCTGGTAGCAGGTGTTCTTGCAAGGATGCCGAAGGAAAGACATCGCTGGGAACAAGTGGCAACCAAATTAAGTGTAGATATTCAGGCTCACTTTGAACGTACCATGGAACTTAGCTATTGGTATTTACCACATCATTTGAGAAAATGCTTATTATATCTTGCAGTATTTTCGGAGGGCAGAGAGATTCAAGTCTCAAAGTTAACATGGTTATGGATATCAGAAGGTTTTGTGAAAACTCACTCGGAGAGGCTTCCGGAGGATATTGCAGATGATTACATGGAGAATCTTGTTGAGAGAAACCTAGTGATGGTTTCTAAAAGAAGTTTTGATGGTAAGATCAAGGCATGTCATATTCATGATCTGTTGCTTGAATTTTGCAGGAAGAAAGCCGAGTTGGAGAGTTTCGCACAGAGGATAAAAGG : GGACATATTTGACCTTTATCGAAAGACCAGGACTTCATGGCGTTTTTCCCTTCATTCTCGGTGTGATAATCTTACATTGTGTTCGTATTTCTCTAATCTGAAGTCTTTCCAATTCAGGGAGGTTAGAAATACTGCATTCTCTTCGATAGATCATGCATCAGACATTTTTAAAAGGTTCAGCTTTCTGAAGGTGTTAGATTTTGA</gDNA_template>
            <first_frame> L  V  L  E  D  V  G  R  S  I  A  Q  K  C  Q  G  L  P  L  S  I  V  L  V  A  G  V  L  A  R  M  P  K  E  R  H  R  W  E  Q  V  A  T  K  L  S  V  D  I  Q  A  H  F  E  R  T  M  E  L  S  Y  W  Y  L  P  H  H  L  R  K  C  L  L  Y  L  A  V  F  S  E  G  R  E  I  Q  V  S  K  L  T  W  L  W  I  S  E  G  F  V  K  T  H  S  E  R  L  P  E  D  I  A  D  D  Y  M  E  N  L  V  E  R  N  L  V  M  V  S  K  R  S  F  D  G  K  I  K  A  C  H  I  H  D  L  L  L  E  F  C  R  K  K  A  E  L  E  S  F  A  Q  R  I  K  G :   D  I  F  D  L  Y  R  K  T  R  T  S  W  R  F  S  L  H  S  R  C  D  N  L  T  L  C  S  Y  F  S  N  L  K  S  F  Q  F  R  E  V  R  N  T  A  F  S  S  I  D  H  A  S  D  I  F  K  R  F  S  F  L  K  V  L  D  F   </first_frame>
            <second_frame>  W  F  *  R  M  L  E  E  A  *  H  K  S  V  K  G  C  P  Y  Q  L  F  W  *  Q  V  F  L  Q  G  C  R  R  K  D  I  A  G  N  K  W  Q  P  N  *  V  *  I  F  R  L  T  L  N  V  P  W  N  L  A  I  G  I  Y  H  I  I  *  E  N  A  Y  Y  I  L  Q  Y  F  R  R  A  E  R  F  K  S  Q  S  *  H  G  Y  G  Y  Q  K  V  L  *  K  L  T  R  R  G  F  R  R  I  L  Q  M  I  T  W  R  I  L  L  R  E  T  *  *  W  F  L  K  E  V  L  M  V  R  S  R  H  V  I  F  M  I  C  C  L  N  F  A  G  R  K  P  S  W  R  V  S  H  R  G  *  K   : G  T  Y  L  T  F  I  E  R  P  G  L  H  G  V  F  P  F  I  L  G  V  I  I  L  H  C  V  R  I  S  L  I  *  S  L  S  N  S  G  R  L  E  I  L  H  S  L  R  *  I  M  H  Q  T  F  L  K  G  S  A  F  *  R  C  *  I  L  </second_frame>
            <third_frame>   G  F  R  G  C  W  K  K  H  S  T  K  V  S  R  A  A  P  I  N  C  S  G  S  R  C  S  C  K  D  A  E  G  K  T  S  L  G  T  S  G  N  Q  I  K  C  R  Y  S  G  S  L  *  T  Y  H  G  T  *  L  L  V  F  T  T  S  F  E  K  M  L  I  I  S  C  S  I  F  G  G  Q  R  D  S  S  L  K  V  N  M  V  M  D  I  R  R  F  C  E  N  S  L  G  E  A  S  G  G  Y  C  R  *  L  H  G  E  S  C  *  E  K  P  S  D  G  F  *  K  K  F  *  W  *  D  Q  G  M  S  Y  S  *  S  V  A  *  I  L  Q  E  E  S  R  V  G  E  F  R  T  E  D  K  R  :  G  H  I  *  P  L  S  K  D  Q  D  F  M  A  F  F  P  S  F  S  V  *  *  S  Y  I  V  F  V  F  L  *  S  E  V  F  P  I  Q  G  G  *  K  Y  C  I  L  F  D  R  S  C  I  R  H  F  *  K  V  Q  L  S  E  G  V  R  F  * </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="26373" stop="25886"/>
                    <exon start="25803" stop="25602"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>690</number_coding_nucleotides>
                  <number_encoded_amino_acids>230</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LVLEDVGRSIAQKCQGLPLSIVLVAGVLARMPKERHRWEQVATKLSVDIQAHFERTMELSYWYLPHHLRKCLLYLAVFSEGREIQVSKLTWLWISEGFVKTHSERLPEDIADDYMENLVERNLVMVSKRSFDGKIKACHIHDLLLEFCRKKAELESFAQRIKGDIFDLYRKTRTSWRFSLHSRCDNLTLCSYFSNLKSFQFREVRNTAFSSIDHASDIFKRFSFLKVLDF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="+" PGL_start="36553" PGL_stop="37114"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="36553" e_stop="37114"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.979"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.979">
            <gDNA_exon_boundary e_start="36553" e_stop="37114" e_length="562"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="36553" stop="37114"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333019" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAATGGTCCATCAACCACCGCAAAAGCCATCACCGAAACCGAAATCGCGGCGGAGTTCTCACACCACGACCTCACCATAGCCCGAATCAACAACGGCAGTTTCGGGTCATGCCCGAAATCCATAATCTCCGCTCAACAACAATGGCAGCTTCAATTCCTTCAACAACCCGATTACTTCTACTTCAACACCTTGAAACCCTCGATGCTTAAATCCCGTGCCTTAGTAAAATCCTTAGTCAACGCCGCCGACGTCGAGGAAATCTCCATCGTCGATAACGCCACAACCGCCGCCGCAATCGTTCTCCAATACATAACCTGGTCTTTCTTCACCTCCGATTTCCGTCCCGGCGACGCCGCCGTTATGCTCCACTACGCTTATGGCTCCGTTAAAAGTTCAGTTCAGGCGTACGTTGCACGAGCTGGAGGAAAGGTAATTGAGGTACATTTACCTTTTCCGTTGAATTCGAATGAAGAAATTGTTACTGAATTTGATAAAGCTCTTAAAATGGGGAAAATGAATGGGGGAAAAATTAGATTAGCTGTGATTGATCATATTACTTCA</gDNA_template>
            <first_frame> K  W  S  I  N  H  R  K  S  H  H  R  N  R  N  R  G  G  V  L  T  P  R  P  H  H  S  P  N  Q  Q  R  Q  F  R  V  M  P  E  I  H  N  L  R  S  T  T  M  A  A  S  I  P  S  T  T  R  L  L  L  L  Q  H  L  E  T  L  D  A  *  I  P  C  L  S  K  I  L  S  Q  R  R  R  R  R  G  N  L  H  R  R  *  R  H  N  R  R  R  N  R  S  P  I  H  N  L  V  F  L  H  L  R  F  P  S  R  R  R  R  R  Y  A  P  L  R  L  W  L  R  *  K  F  S  S  G  V  R  C  T  S  W  R  K  G  N  *  G  T  F  T  F  S  V  E  F  E  *  R  N  C  Y  *  I  *  *  S  S  *  N  G  E  N  E  W  G  K  N  *  I  S  C  D  *  S  Y  Y  F  </first_frame>
            <second_frame>  N  G  P  S  T  T  A  K  A  I  T  E  T  E  I  A  A  E  F  S  H  H  D  L  T  I  A  R  I  N  N  G  S  F  G  S  C  P  K  S  I  I  S  A  Q  Q  Q  W  Q  L  Q  F  L  Q  Q  P  D  Y  F  Y  F  N  T  L  K  P  S  M  L  K  S  R  A  L  V  K  S  L  V  N  A  A  D  V  E  E  I  S  I  V  D  N  A  T  T  A  A  A  I  V  L  Q  Y  I  T  W  S  F  F  T  S  D  F  R  P  G  D  A  A  V  M  L  H  Y  A  Y  G  S  V  K  S  S  V  Q  A  Y  V  A  R  A  G  G  K  V  I  E  V  H  L  P  F  P  L  N  S  N  E  E  I  V  T  E  F  D  K  A  L  K  M  G  K  M  N  G  G  K  I  R  L  A  V  I  D  H  I  T  S </second_frame>
            <third_frame>   M  V  H  Q  P  P  Q  K  P  S  P  K  P  K  S  R  R  S  S  H  T  T  T  S  P  *  P  E  S  T  T  A  V  S  G  H  A  R  N  P  *  S  P  L  N  N  N  G  S  F  N  S  F  N  N  P  I  T  S  T  S  T  P  *  N  P  R  C  L  N  P  V  P  *  *  N  P  *  S  T  P  P  T  S  R  K  S  P  S  S  I  T  P  Q  P  P  P  Q  S  F  S  N  T  *  P  G  L  S  S  P  P  I  S  V  P  A  T  P  P  L  C  S  T  T  L  M  A  P  L  K  V  Q  F  R  R  T  L  H  E  L  E  E  R  *  L  R  Y  I  Y  L  F  R  *  I  R  M  K  K  L  L  L  N  L  I  K  L  L  K  W  G  K  *  M  G  E  K  L  D  *  L  *  L  I  I  L  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="36554" stop="37114"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>561</number_coding_nucleotides>
                  <number_encoded_amino_acids>187</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NGPSTTAKAITETEIAAEFSHHDLTIARINNGSFGSCPKSIISAQQQWQLQFLQQPDYFYFNTLKPSMLKSRALVKSLVNAADVEEISIVDNATTAAAIVLQYITWSFFTSDFRPGDAAVMLHYAYGSVKSSVQAYVARAGGKVIEVHLPFPLNSNEEIVTEFDKALKMGKMNGGKIRLAVIDHITS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="56514" PGL_stop="57344"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="56514" e_stop="56722"/>
            <exon e_start="56809" e_stop="57344"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.982" acc_prob="1.000" e_score="0.976"/>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.976">
            <gDNA_exon_boundary e_start="56514" e_stop="56722" e_length="209"/>
          </exon>
          <intron i_serial="1" don_prob="0.982" acc_prob="1.000">
            <gDNA_intron_boundary i_start="56723" i_stop="56808" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="0.993">
            <gDNA_exon_boundary e_start="56809" e_stop="57344" e_length="536"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="56514" stop="56722"/>
              <exon start="56809" stop="57344"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U344716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTAAGAATACTATATTTGTGTTCTCTTTTTCTTTACTTGTATACATGGGAAAATCATGAGTCCCAAGAAAATCTTTTTGCTCAAAAGCCACTTTAATAAAAATGTTTTTGAGTCAATTTATGTGCAGAACAATGACTTGGTTTTTCACTTCTATTTGGGGTTTCTTGTGTTGGTTTGTTTCCAAGATTTGCTTTTTCTTAGAGAACAG : GAGGGTTGTTGATGAAAATGATGAAATGGACTGTAAAAATCGGAAAAGATTAGATTTTGATGAGAAGGGTGTGGAAAAAGAGAGTTCTTTTTTGGTTCAGAGTAAGTATGAGTATATATCTGGTAAAGATTCTTTTGGTTTTATAGAGAAATCAGAAGCTAAAAGTTTTTTAGTTGAAGAAATGTTTGTGAATTTTAATGAAGGAGAAGGGGTTGTAGAAAAAGAGATTGATAAAAATTCTGATGATAAATTGTTTTATTTCTCTTTTTTCAAAAATGGAAGTGTTTATCAAGAAAAATCAGAGCTTTTTGATGAAAAAAATGCTAATGATCAAGAAAAGTTGGAATTTTTAGATGAAAAGGGAGATAATCTTTGTTTTGAGGAGATTTTGAGGAAAAATGATGAAGTTTTTAGTGATATTGAAACACGGGATTCAGAGGATATGTGTTATGAAATTCAATTGCTTCCTGAGAATGAGTCTTTAATTCGAAATTCGATTCGAGGGTCTGAGGGTCTTGGAGATGAATTATGTTCTA</gDNA_template>
            <first_frame> I  K  N  T  I  F  V  F  S  F  S  L  L  V  Y  M  G  K  S  *  V  P  R  K  S  F  C  S  K  A  T  L  I  K  M  F  L  S  Q  F  M  C  R  T  M  T  W  F  F  T  S  I  W  G  F  L  C  W  F  V  S  K  I  C  F  F  L  E  N  R :   R  V  V  D  E  N  D  E  M  D  C  K  N  R  K  R  L  D  F  D  E  K  G  V  E  K  E  S  S  F  L  V  Q  S  K  Y  E  Y  I  S  G  K  D  S  F  G  F  I  E  K  S  E  A  K  S  F  L  V  E  E  M  F  V  N  F  N  E  G  E  G  V  V  E  K  E  I  D  K  N  S  D  D  K  L  F  Y  F  S  F  F  K  N  G  S  V  Y  Q  E  K  S  E  L  F  D  E  K  N  A  N  D  Q  E  K  L  E  F  L  D  E  K  G  D  N  L  C  F  E  E  I  L  R  K  N  D  E  V  F  S  D  I  E  T  R  D  S  E  D  M  C  Y  E  I  Q  L  L  P  E  N  E  S  L  I  R  N  S  I  R  G  S  E  G  L  G  D  E  L  C  S  </first_frame>
            <second_frame>  L  R  I  L  Y  L  C  S  L  F  L  Y  L  Y  T  W  E  N  H  E  S  Q  E  N  L  F  A  Q  K  P  L  *  *  K  C  F  *  V  N  L  C  A  E  Q  *  L  G  F  S  L  L  F  G  V  S  C  V  G  L  F  P  R  F  A  F  S  *  R  T   : G  G  L  L  M  K  M  M  K  W  T  V  K  I  G  K  D  *  I  L  M  R  R  V  W  K  K  R  V  L  F  W  F  R  V  S  M  S  I  Y  L  V  K  I  L  L  V  L  *  R  N  Q  K  L  K  V  F  *  L  K  K  C  L  *  I  L  M  K  E  K  G  L  *  K  K  R  L  I  K  I  L  M  I  N  C  F  I  S  L  F  S  K  M  E  V  F  I  K  K  N  Q  S  F  L  M  K  K  M  L  M  I  K  K  S  W  N  F  *  M  K  R  E  I  I  F  V  L  R  R  F  *  G  K  M  M  K  F  L  V  I  L  K  H  G  I  Q  R  I  C  V  M  K  F  N  C  F  L  R  M  S  L  *  F  E  I  R  F  E  G  L  R  V  L  E  M  N  Y  V  L </second_frame>
            <third_frame>   *  E  Y  Y  I  C  V  L  F  F  F  T  C  I  H  G  K  I  M  S  P  K  K  I  F  L  L  K  S  H  F  N  K  N  V  F  E  S  I  Y  V  Q  N  N  D  L  V  F  H  F  Y  L  G  F  L  V  L  V  C  F  Q  D  L  L  F  L  R  E  Q  :  E  G  C  *  *  K  *  *  N  G  L  *  K  S  E  K  I  R  F  *  *  E  G  C  G  K  R  E  F  F  F  G  S  E  *  V  *  V  Y  I  W  *  R  F  F  W  F  Y  R  E  I  R  S  *  K  F  F  S  *  R  N  V  C  E  F  *  *  R  R  R  G  C  R  K  R  D  *  *  K  F  *  *  *  I  V  L  F  L  F  F  Q  K  W  K  C  L  S  R  K  I  R  A  F  *  *  K  K  C  *  *  S  R  K  V  G  I  F  R  *  K  G  R  *  S  L  F  *  G  D  F  E  E  K  *  *  S  F  *  *  Y  *  N  T  G  F  R  G  Y  V  L  *  N  S  I  A  S  *  E  *  V  F  N  S  K  F  D  S  R  V  *  G  S  W  R  *  I  M  F   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="56574" stop="56722"/>
                    <exon start="56809" stop="57343"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>684</number_coding_nucleotides>
                  <number_encoded_amino_acids>228</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VPRKSFCSKATLIKMFLSQFMCRTMTWFFTSIWGFLCWFVSKICFFLENRRVVDENDEMDCKNRKRLDFDEKGVEKESSFLVQSKYEYISGKDSFGFIEKSEAKSFLVEEMFVNFNEGEGVVEKEIDKNSDDKLFYFSFFKNGSVYQEKSELFDEKNANDQEKLEFLDEKGDNLCFEEILRKNDEVFSDIETRDSEDMCYEIQLLPENESLIRNSIRGSEGLGDELCS</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="57570" PGL_stop="58272"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57570" e_stop="58272"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.999"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.999">
            <gDNA_exon_boundary e_start="57570" e_stop="58272" e_length="703"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57570" stop="58272"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U333385" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTCGAGTCGAAAATCATGGGATATCGATGATTTTGCTTCTCAAAATGTTGACAGAGTAGAGGAAACAGATGTGAATGGTGAGGAAATGAAGTTAATGGATGATATTCAAGAATCACCAGATCATAATTCGAGTCGAAACTCATTGTACATGGATGGTTTTGCTTCTCAAAATGTTGACGGAGTTGAAGAAACAAATGTGAACTATGAGGACTTGAAGTTAATGGATGATTTTCAAGATTCTCCGAATCATAATTCGAGTCGAAAATCATGGGATACAGATGGTTTTGCTTCTCAAAATGTTGACAGAGTTGAGGAAACAGATGTGAACTATGAGGAAATGGATGATTTTCAAGATTCTCCAAATCATCATTCGAATCGAAAATCATGGGAAATGGATGGTTTTGCTTCTCAAAATGTTGATATAGTTGAGGAAACAGATGTGAACTATGAGGAAATGGATGATTTTCAAGAATCACCAGATCATAATTCGAGTCGAAAATTATGGGATACTGATTCAGATTCGGATGACGATGATGATATCTTGTTAGAACATCAGAATTTAGTCAGGCAAATGAAAATGGAAATGAAAAATTCAAGAATCACAGGTCTGCCTACTATATCAGAAGATTATGAATCTCCTAAAGTAGTAGAAGATATGAAGCCATTGAAAATTGATGAAAAAATTGGATACAAATATTGTAT</gDNA_template>
            <first_frame> I  R  V  E  N  H  G  I  S  M  I  L  L  L  K  M  L  T  E  *  R  K  Q  M  *  M  V  R  K  *  S  *  W  M  I  F  K  N  H  Q  I  I  I  R  V  E  T  H  C  T  W  M  V  L  L  L  K  M  L  T  E  L  K  K  Q  M  *  T  M  R  T  *  S  *  W  M  I  F  K  I  L  R  I  I  I  R  V  E  N  H  G  I  Q  M  V  L  L  L  K  M  L  T  E  L  R  K  Q  M  *  T  M  R  K  W  M  I  F  K  I  L  Q  I  I  I  R  I  E  N  H  G  K  W  M  V  L  L  L  K  M  L  I  *  L  R  K  Q  M  *  T  M  R  K  W  M  I  F  K  N  H  Q  I  I  I  R  V  E  N  Y  G  I  L  I  Q  I  R  M  T  M  M  I  S  C  *  N  I  R  I  *  S  G  K  *  K  W  K  *  K  I  Q  E  S  Q  V  C  L  L  Y  Q  K  I  M  N  L  L  K  *  *  K  I  *  S  H  *  K  L  M  K  K  L  D  T  N  I  V  </first_frame>
            <second_frame>  F  E  S  K  I  M  G  Y  R  *  F  C  F  S  K  C  *  Q  S  R  G  N  R  C  E  W  *  G  N  E  V  N  G  *  Y  S  R  I  T  R  S  *  F  E  S  K  L  I  V  H  G  W  F  C  F  S  K  C  *  R  S  *  R  N  K  C  E  L  *  G  L  E  V  N  G  *  F  S  R  F  S  E  S  *  F  E  S  K  I  M  G  Y  R  W  F  C  F  S  K  C  *  Q  S  *  G  N  R  C  E  L  *  G  N  G  *  F  S  R  F  S  K  S  S  F  E  S  K  I  M  G  N  G  W  F  C  F  S  K  C  *  Y  S  *  G  N  R  C  E  L  *  G  N  G  *  F  S  R  I  T  R  S  *  F  E  S  K  I  M  G  Y  *  F  R  F  G  *  R  *  *  Y  L  V  R  T  S  E  F  S  Q  A  N  E  N  G  N  E  K  F  K  N  H  R  S  A  Y  Y  I  R  R  L  *  I  S  *  S  S  R  R  Y  E  A  I  E  N  *  *  K  N  W  I  Q  I  L  Y </second_frame>
            <third_frame>   S  S  R  K  S  W  D  I  D  D  F  A  S  Q  N  V  D  R  V  E  E  T  D  V  N  G  E  E  M  K  L  M  D  D  I  Q  E  S  P  D  H  N  S  S  R  N  S  L  Y  M  D  G  F  A  S  Q  N  V  D  G  V  E  E  T  N  V  N  Y  E  D  L  K  L  M  D  D  F  Q  D  S  P  N  H  N  S  S  R  K  S  W  D  T  D  G  F  A  S  Q  N  V  D  R  V  E  E  T  D  V  N  Y  E  E  M  D  D  F  Q  D  S  P  N  H  H  S  N  R  K  S  W  E  M  D  G  F  A  S  Q  N  V  D  I  V  E  E  T  D  V  N  Y  E  E  M  D  D  F  Q  E  S  P  D  H  N  S  S  R  K  L  W  D  T  D  S  D  S  D  D  D  D  D  I  L  L  E  H  Q  N  L  V  R  Q  M  K  M  E  M  K  N  S  R  I  T  G  L  P  T  I  S  E  D  Y  E  S  P  K  V  V  E  D  M  K  P  L  K  I  D  E  K  I  G  Y  K  Y  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="57572" stop="58270"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>699</number_coding_nucleotides>
                  <number_encoded_amino_acids>233</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSRKSWDIDDFASQNVDRVEETDVNGEEMKLMDDIQESPDHNSSRNSLYMDGFASQNVDGVEETNVNYEDLKLMDDFQDSPNHNSSRKSWDTDGFASQNVDRVEETDVNYEEMDDFQDSPNHHSNRKSWEMDGFASQNVDIVEETDVNYEEMDDFQESPDHNSSRKLWDTDSDSDDDDDILLEHQNLVRQMKMEMKNSRITGLPTISEDYESPKVVEDMKPLKIDEKIGYKYC</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="59693" PGL_stop="60930"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="59693" e_stop="60108"/>
            <exon e_start="60284" e_stop="60930"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.990" e_score="0.998"/>
          <exon-only e_score="0.924"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.998">
            <gDNA_exon_boundary e_start="59693" e_stop="60108" e_length="416"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.990">
            <gDNA_intron_boundary i_start="60109" i_stop="60283" i_length="175"/>
          </intron>
          <exon e_serial="2" e_score="0.924">
            <gDNA_exon_boundary e_start="60284" e_stop="60930" e_length="647"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="59693" stop="60108"/>
              <exon start="60284" stop="60930"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U327183" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATTTCAAGTACTTTTACAAAGATTTGTCGAGGATGAGCCATTTCAAGGACCACGAGTCCAATATTATGTCAGGAAGAGGTGCATTCTCCGTAGCTTTCTTCAAGTCCCGAGCATTAGAGGTATGCATTTTTTCGTTGAGTTGTTAAAATACCTAGACTCATAGTAACGAGAGGAATACTTTGACTGTCTAGCAGATGATCGTTTTAAGGGTAAGAAGGGAGGACGAGAAGAGGAAAAGGATGTCATTTCCATAATGAAATTGGGCGACGTTATTAAGGAGACGATGCAAGTTTTCTGGGAGTTTCTTCGTGCTGATAAACGTGAAGCTAATTTGGCCTTAAAGGGTGTTCAAGGAACTCAAATGGACAATGCAGAAATCGAGCTTTTTATGAATGTCAAACTAGACCTTCAAAAG : AAGGAGAGGAAGTTGAAAGATGTACAAAGAAGTGGCAATTGCATAGTGAAGAAGTTCCAAAAACAACAAGAACGTCGATTGAGTCCTTCATTATTCGCGTCACTCGTGGAGCTAAAGTTGGTATCAAGAGTGCTAAGTTTACCAAGATTAAGGAGAGATCATTTGGTTTGGTGCCAGAGGAAACTAAGCAATATCAATGTTGCAGGGAGAAAAGTTAGCATGGAACAATCTTTTTCACTTTTTCCATGTTAAGTATTAGTGATTAGTATATGTCTAGTTTTTCATAATGCTAGTGAAGATCTTCTTAGGACTATAGTTCTAAGCTACGTTGTTCGGACTCTTCAAAAATGTCACCGAATGCATGTCAGATTCTCTAAAAGTAGTGTATTTTTGGAGAACCTGACACGGGTGCGACATCAAAAGTGAAAGAGTCCGCACAACTTAGGTTCTAGGCTATGTTAGTACCCAAAAAAAAAAAAAAAAAACTTGCACCTTTGCTTCCCCTTGAAAAAAGATACCTAGAGGAGGAGAATATGTAGCCTGATTTTGGAAAGGCAAATTTAGAATAATGGTTAATCATGTTTTTGAATAGTAGTAAAATAGATTTATAAAGTGGTTGACTTGAAAAGTATCAAATGTTAGAAAAG</gDNA_template>
            <first_frame> N  F  K  Y  F  Y  K  D  L  S  R  M  S  H  F  K  D  H  E  S  N  I  M  S  G  R  G  A  F  S  V  A  F  F  K  S  R  A  L  E  V  C  I  F  S  L  S  C  *  N  T  *  T  H  S  N  E  R  N  T  L  T  V  *  Q  M  I  V  L  R  V  R  R  E  D  E  K  R  K  R  M  S  F  P  *  *  N  W  A  T  L  L  R  R  R  C  K  F  S  G  S  F  F  V  L  I  N  V  K  L  I  W  P  *  R  V  F  K  E  L  K  W  T  M  Q  K  S  S  F  L  *  M  S  N  *  T  F  K  R :   R  R  G  S  *  K  M  Y  K  E  V  A  I  A  *  *  R  S  S  K  N  N  K  N  V  D  *  V  L  H  Y  S  R  H  S  W  S  *  S  W  Y  Q  E  C  *  V  Y  Q  D  *  G  E  I  I  W  F  G  A  R  G  N  *  A  I  S  M  L  Q  G  E  K  L  A  W  N  N  L  F  H  F  F  H  V  K  Y  *  *  L  V  Y  V  *  F  F  I  M  L  V  K  I  F  L  G  L  *  F  *  A  T  L  F  G  L  F  K  N  V  T  E  C  M  S  D  S  L  K  V  V  Y  F  W  R  T  *  H  G  C  D  I  K  S  E  R  V  R  T  T  *  V  L  G  Y  V  S  T  Q  K  K  K  K  K  T  C  T  F  A  S  P  *  K  K  I  P  R  G  G  E  Y  V  A  *  F  W  K  G  K  F  R  I  M  V  N  H  V  F  E  *  *  *  N  R  F  I  K  W  L  T  *  K  V  S  N  V  R  K  </first_frame>
            <second_frame>  I  S  S  T  F  T  K  I  C  R  G  *  A  I  S  R  T  T  S  P  I  L  C  Q  E  E  V  H  S  P  *  L  S  S  S  P  E  H  *  R  Y  A  F  F  R  *  V  V  K  I  P  R  L  I  V  T  R  G  I  L  *  L  S  S  R  *  S  F  *  G  *  E  G  R  T  R  R  G  K  G  C  H  F  H  N  E  I  G  R  R  Y  *  G  D  D  A  S  F  L  G  V  S  S  C  *  *  T  *  S  *  F  G  L  K  G  C  S  R  N  S  N  G  Q  C  R  N  R  A  F  Y  E  C  Q  T  R  P  S  K   : E  G  E  E  V  E  R  C  T  K  K  W  Q  L  H  S  E  E  V  P  K  T  T  R  T  S  I  E  S  F  I  I  R  V  T  R  G  A  K  V  G  I  K  S  A  K  F  T  K  I  K  E  R  S  F  G  L  V  P  E  E  T  K  Q  Y  Q  C  C  R  E  K  S  *  H  G  T  I  F  F  T  F  S  M  L  S  I  S  D  *  Y  M  S  S  F  S  *  C  *  *  R  S  S  *  D  Y  S  S  K  L  R  C  S  D  S  S  K  M  S  P  N  A  C  Q  I  L  *  K  *  C  I  F  G  E  P  D  T  G  A  T  S  K  V  K  E  S  A  Q  L  R  F  *  A  M  L  V  P  K  K  K  K  K  K  L  A  P  L  L  P  L  E  K  R  Y  L  E  E  E  N  M  *  P  D  F  G  K  A  N  L  E  *  W  L  I  M  F  L  N  S  S  K  I  D  L  *  S  G  *  L  E  K  Y  Q  M  L  E  K </second_frame>
            <third_frame>   F  Q  V  L  L  Q  R  F  V  E  D  E  P  F  Q  G  P  R  V  Q  Y  Y  V  R  K  R  C  I  L  R  S  F  L  Q  V  P  S  I  R  G  M  H  F  F  V  E  L  L  K  Y  L  D  S  *  *  R  E  E  Y  F  D  C  L  A  D  D  R  F  K  G  K  K  G  G  R  E  E  E  K  D  V  I  S  I  M  K  L  G  D  V  I  K  E  T  M  Q  V  F  W  E  F  L  R  A  D  K  R  E  A  N  L  A  L  K  G  V  Q  G  T  Q  M  D  N  A  E  I  E  L  F  M  N  V  K  L  D  L  Q  K  :  K  E  R  K  L  K  D  V  Q  R  S  G  N  C  I  V  K  K  F  Q  K  Q  Q  E  R  R  L  S  P  S  L  F  A  S  L  V  E  L  K  L  V  S  R  V  L  S  L  P  R  L  R  R  D  H  L  V  W  C  Q  R  K  L  S  N  I  N  V  A  G  R  K  V  S  M  E  Q  S  F  S  L  F  P  C  *  V  L  V  I  S  I  C  L  V  F  H  N  A  S  E  D  L  L  R  T  I  V  L  S  Y  V  V  R  T  L  Q  K  C  H  R  M  H  V  R  F  S  K  S  S  V  F  L  E  N  L  T  R  V  R  H  Q  K  *  K  S  P  H  N  L  G  S  R  L  C  *  Y  P  K  K  K  K  K  N  L  H  L  C  F  P  L  K  K  D  T  *  R  R  R  I  C  S  L  I  L  E  R  Q  I  *  N  N  G  *  S  C  F  *  I  V  V  K  *  I  Y  K  V  V  D  L  K  S  I  K  C  *  K   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="59860" stop="60108"/>
                    <exon start="60284" stop="60535"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>498</number_coding_nucleotides>
                  <number_encoded_amino_acids>166</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>REEYFDCLADDRFKGKKGGREEEKDVISIMKLGDVIKETMQVFWEFLRADKREANLALKGVQGTQMDNAEIELFMNVKLDLQKKERKLKDVQRSGNCIVKKFQKQQERRLSPSLFASLVELKLVSRVLSLPRLRRDHLVWCQRKLSNINVAGRKVSMEQSFSLFPC*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="65142" PGL_stop="65762"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65142" e_stop="65762"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="65142" e_stop="65762" e_length="621"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65142" stop="65762"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328419" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TAGGTTATCTTTGTGACTCCTGATAACATGATTTAACTATATGACATCTTATTTAACATGCAGTTTTTCAATATAGAGAAATGGATGAAGTTATCCCTCTATTGTGCAAAATATACTCATTTTACTTTATCCTTTATATTTTGGTGCCATCATACCCTTGCCGTTGAGCTCTAGCATAGACAGAGTGCATTCCACTTCCACCTTTGAAATTACTTTGGTATAAAGGTTGAAATTTCGCCTCTATACTTGCTATTGTTTTAAAATACCCTCTATTATACTTCAAGTTGGAACCTAATAGGCTGCAAATCCGAGACAATTTGCTTGCACAAGTGTATGATAACCTCATCAAGCTGTGCCTGATTATCAATGTTATACAAAAAAGTGTATGAGTCCCAAGTATAACAAAGGGTAAAGCGTTTTTGGTCAACTTCCCTTTATTAAATGTATTATGCCTAAATGCATCTCAATTTATTTTTATGTACTTCTACAATATCATCAGTGTAACATTTTCTAATGGTTTGAGGCAGATTACTTCCTCATCAACTAACAGATGTTCTCTGTAGCTATCAGTGCATCTCAAAAAAAAAATTTCATGTACCTAGAATATTATCAGTGTAACAT</gDNA_template>
            <first_frame> *  V  I  F  V  T  P  D  N  M  I  *  L  Y  D  I  L  F  N  M  Q  F  F  N  I  E  K  W  M  K  L  S  L  Y  C  A  K  Y  T  H  F  T  L  S  F  I  F  W  C  H  H  T  L  A  V  E  L  *  H  R  Q  S  A  F  H  F  H  L  *  N  Y  F  G  I  K  V  E  I  S  P  L  Y  L  L  L  F  *  N  T  L  Y  Y  T  S  S  W  N  L  I  G  C  K  S  E  T  I  C  L  H  K  C  M  I  T  S  S  S  C  A  *  L  S  M  L  Y  K  K  V  Y  E  S  Q  V  *  Q  R  V  K  R  F  W  S  T  S  L  Y  *  M  Y  Y  A  *  M  H  L  N  L  F  L  C  T  S  T  I  S  S  V  *  H  F  L  M  V  *  G  R  L  L  P  H  Q  L  T  D  V  L  C  S  Y  Q  C  I  S  K  K  K  F  H  V  P  R  I  L  S  V  *  H </first_frame>
            <second_frame>  R  L  S  L  *  L  L  I  T  *  F  N  Y  M  T  S  Y  L  T  C  S  F  S  I  *  R  N  G  *  S  Y  P  S  I  V  Q  N  I  L  I  L  L  Y  P  L  Y  F  G  A  I  I  P  L  P  L  S  S  S  I  D  R  V  H  S  T  S  T  F  E  I  T  L  V  *  R  L  K  F  R  L  Y  T  C  Y  C  F  K  I  P  S  I  I  L  Q  V  G  T  *  *  A  A  N  P  R  Q  F  A  C  T  S  V  *  *  P  H  Q  A  V  P  D  Y  Q  C  Y  T  K  K  C  M  S  P  K  Y  N  K  G  *  S  V  F  G  Q  L  P  F  I  K  C  I  M  P  K  C  I  S  I  Y  F  Y  V  L  L  Q  Y  H  Q  C  N  I  F  *  W  F  E  A  D  Y  F  L  I  N  *  Q  M  F  S  V  A  I  S  A  S  Q  K  K  N  F  M  Y  L  E  Y  Y  Q  C  N   </second_frame>
            <third_frame>   G  Y  L  C  D  S  *  *  H  D  L  T  I  *  H  L  I  *  H  A  V  F  Q  Y  R  E  M  D  E  V  I  P  L  L  C  K  I  Y  S  F  Y  F  I  L  Y  I  L  V  P  S  Y  P  C  R  *  A  L  A  *  T  E  C  I  P  L  P  P  L  K  L  L  W  Y  K  G  *  N  F  A  S  I  L  A  I  V  L  K  Y  P  L  L  Y  F  K  L  E  P  N  R  L  Q  I  R  D  N  L  L  A  Q  V  Y  D  N  L  I  K  L  C  L  I  I  N  V  I  Q  K  S  V  *  V  P  S  I  T  K  G  K  A  F  L  V  N  F  P  L  L  N  V  L  C  L  N  A  S  Q  F  I  F  M  Y  F  Y  N  I  I  S  V  T  F  S  N  G  L  R  Q  I  T  S  S  S  T  N  R  C  S  L  *  L  S  V  H  L  K  K  K  I  S  C  T  *  N  I  I  S  V  T  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C05HBa0145P19.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="65896" PGL_stop="66519"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="65896" e_stop="66519"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="65896" e_stop="66519" e_length="624"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="65896" stop="66519"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U312651" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTCAATGGCTTAAAGACTTCTCTTTTTGCAGATTCCACACTTGAGACCTGCTGAGTACAAGAGATCCAGGTTATCTAGGAACAGGAGGACTGTGAACCGTGCTTATGGTGGTGTGTTGTCCGGCAGTGCTGTACGTGAAAGGTATAGTTTTGGTCCACTAGAGTGTTCTCAAACCGTTTAAACAAAATTAGTGTTCTTCCAACTCACTAGATGTTTTCTTGTACAACAGGATCATCAGAGCCTTTTTGGTTGAAGAACAAAAGATCGTGAAGAAGGTTTTGAAGATCCAGAAAGCCAAGGAAAAGCTAGCATCCAAGAGCTAAGCCTTGAATCCTCGATGATGTCGTGAGAGGAGTTTCTGATACTGCAGGTTTCTAGGAAATCATGACTGTATTTTGATTTTTGGTCTTGAGATTTGTATGTTGCTGGTTTTTCGTTAAAATACGATATTGGAGGTCTTTCTTCAGTTTGTCGAAATATCCGTTCTCCTAGGTATCTCTATTTTCTTGTTCTGAATATTTAAACTTGTTATGGATATTTGCAACTTCTATTCAATTAGGCTATTCGTTCCAGTTTTGATTCTTAAATCAGTTTATACTTGAATCTGAGTTTGTTTTGATACA</gDNA_template>
            <first_frame> F  Q  W  L  K  D  F  S  F  C  R  F  H  T  *  D  L  L  S  T  R  D  P  G  Y  L  G  T  G  G  L  *  T  V  L  M  V  V  C  C  P  A  V  L  Y  V  K  G  I  V  L  V  H  *  S  V  L  K  P  F  K  Q  N  *  C  S  S  N  S  L  D  V  F  L  Y  N  R  I  I  R  A  F  L  V  E  E  Q  K  I  V  K  K  V  L  K  I  Q  K  A  K  E  K  L  A  S  K  S  *  A  L  N  P  R  *  C  R  E  R  S  F  *  Y  C  R  F  L  G  N  H  D  C  I  L  I  F  G  L  E  I  C  M  L  L  V  F  R  *  N  T  I  L  E  V  F  L  Q  F  V  E  I  S  V  L  L  G  I  S  I  F  L  F  *  I  F  K  L  V  M  D  I  C  N  F  Y  S  I  R  L  F  V  P  V  L  I  L  K  S  V  Y  T  *  I  *  V  C  F  D  T </first_frame>
            <second_frame>  F  N  G  L  K  T  S  L  F  A  D  S  T  L  E  T  C  *  V  Q  E  I  Q  V  I  *  E  Q  E  D  C  E  P  C  L  W  W  C  V  V  R  Q  C  C  T  *  K  V  *  F  W  S  T  R  V  F  S  N  R  L  N  K  I  S  V  L  P  T  H  *  M  F  S  C  T  T  G  S  S  E  P  F  W  L  K  N  K  R  S  *  R  R  F  *  R  S  R  K  P  R  K  S  *  H  P  R  A  K  P  *  I  L  D  D  V  V  R  G  V  S  D  T  A  G  F  *  E  I  M  T  V  F  *  F  L  V  L  R  F  V  C  C  W  F  F  V  K  I  R  Y  W  R  S  F  F  S  L  S  K  Y  P  F  S  *  V  S  L  F  S  C  S  E  Y  L  N  L  L  W  I  F  A  T  S  I  Q  L  G  Y  S  F  Q  F  *  F  L  N  Q  F  I  L  E  S  E  F  V  L  I   </second_frame>
            <third_frame>   S  M  A  *  R  L  L  F  L  Q  I  P  H  L  R  P  A  E  Y  K  R  S  R  L  S  R  N  R  R  T  V  N  R  A  Y  G  G  V  L  S  G  S  A  V  R  E  R  Y  S  F  G  P  L  E  C  S  Q  T  V  *  T  K  L  V  F  F  Q  L  T  R  C  F  L  V  Q  Q  D  H  Q  S  L  F  G  *  R  T  K  D  R  E  E  G  F  E  D  P  E  S  Q  G  K  A  S  I  Q  E  L  S  L  E  S  S  M  M  S  *  E  E  F  L  I  L  Q  V  S  R  K  S  *  L  Y  F  D  F  W  S  *  D  L  Y  V  A  G  F  S  L  K  Y  D  I  G  G  L  S  S  V  C  R  N  I  R  S  P  R  Y  L  Y  F  L  V  L  N  I  *  T  C  Y  G  Y  L  Q  L  L  F  N  *  A  I  R  S  S  F  D  S  *  I  S  L  Y  L  N  L  S  L  F  *  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C05HBa0145P19.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="96026" PGL_stop="104854"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="96026" e_stop="96153"/>
            <exon e_start="97443" e_stop="98014"/>
            <exon e_start="100713" e_stop="102577"/>
            <exon e_start="103213" e_stop="103363"/>
            <exon e_start="103833" e_stop="104854"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.754" acc_prob="0.982" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.884" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.977" e_score="0.998"/>
          <exon-intron don_prob="0.983" acc_prob="0.888" e_score="1.000"/>
          <exon-only e_score="0.994"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="96026" e_stop="96153" e_length="128"/>
          </exon>
          <intron i_serial="1" don_prob="0.754" acc_prob="0.982">
            <gDNA_intron_boundary i_start="96154" i_stop="97442" i_length="1289"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="97443" e_stop="98014" e_length="572"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.884">
            <gDNA_intron_boundary i_start="98015" i_stop="100712" i_length="2698"/>
          </intron>
          <exon e_serial="3" e_score="0.998">
            <gDNA_exon_boundary e_start="100713" e_stop="102577" e_length="1865"/>
          </exon>
          <intron i_serial="3" don_prob="0.995" acc_prob="0.977">
            <gDNA_intron_boundary i_start="102578" i_stop="103212" i_length="635"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="103213" e_stop="103363" e_length="151"/>
          </exon>
          <intron i_serial="4" don_prob="0.983" acc_prob="0.888">
            <gDNA_intron_boundary i_start="103364" i_stop="103832" i_length="469"/>
          </intron>
          <exon e_serial="5" e_score="0.994">
            <gDNA_exon_boundary e_start="103833" e_stop="104854" e_length="1022"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="96026" stop="96153"/>
              <exon start="97443" stop="98014"/>
              <exon start="100713" stop="102577"/>
              <exon start="103213" stop="103363"/>
              <exon start="103833" stop="104854"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318772" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAATATTCTTTACTTACTTCACCAGGGATTGACTCATCACTCCCCTCAAGTCTTTGTGTGTTGTGATAATAAATTTGGTTGTGCTTCAGTTTCAGTCACTACTGCTGGGTAGTTTTTATTTTGCATA : ACTTCAGGGGGTATTCCAGTTGGTGTTAGCATTTGAAAGTCGAACTGCACTTGGAATTTGGCTACATGGGAAAGACAATTCAGGTTTTCGGATTCCCTTATCTTCTCTCTGCGGAAGTGGTTAAGTCATTCTTAGAGAAATATACAGGATATGGAACTGTATGTGCATTGGAGGTTAAACAGTCCAAAGGAGGATCTAGAGCATTTGCCAAAGTTCAATTTGCCGACAACATAAGTGCTGACAAAATCATCACTTTGGCTAATAACAGGCTGTATTTTGGCTCTTCTTATTTGAAGGCTTGGGAAATGAAAACTGATATTGTCCAACTGCGGGCATATGTGGATCAGATGGATGGCATAACTTTGAATTTCGGATGTCAGATATCAGATGACAAGTTTGCAGTGTTGGGAAGTACAGAAGTTTCAATTCAATTTGGCATTGGATTGAAGAAATTTTTTTTCTTTTTATCTAGTGGTTCAGCTGACTATAAACTTCAGCTTTCATATGAAAATATATGGCAGGTTGTGCTCCATCGTCCATATGGTCAAAATGCTCAGTTTCTCCTCATACAG : TTATTTGGTGCTCCTCGGATCTATAAGAGACTTGAAAACTCCTGTTATAGCTTCTTTAAGGAAACTCCTGATGATCAGTGGGTGAGGACAACAGATTTCCCTCCATCTTGGATAGGGCTATCTTCTAGCTTATGTTTGCAGTTCCGTAGGGGTGTTCGTCTTCCAAATTTCGAGGAAAGTTTTTTCCACTATGCAGAACGTGAAAACAATATTACTTTACAGACTGGTTTCACCTTTTTCGTCTCTCAAAAATCGGCTCTGGTTCCCAATGTCCAGCCTCCGGAAGGAATTTCAATTCCCTACAAGATTTTGTTCAAAATTAGTTCTTTGGTACAGCATGGATGCATACCTGGGCCAGCATTAAATGTCTACTTTTTCCGATTAGTTGATCCTCGAAGGAGAAATGTGGCATGCATTGAGCATGCCTTAGAGAAACTGTACTATATAAAGGAGTGCTGTTATGATCCGGTGAGGTGGCTCACTGAGCAGTATGATGGGTATCTCAAGGGTAGACAACCTCCAAAATCTCCGTCCATCACTTTAGATGATGGGTTGGTGTATGTAAGAAGGGTCCTAGTAACACCATGCAAAGTTTATTTTTGTGGTCCAGAGGTTAATGTTTCCAATCGGGTTCTCCGCAATTATTCTGAAGACATAGATAACTTTCTTCGTGTTTCTTTTGTTGATGAGGAGTGGGAGAAACTGTATTCTACAGACTTATTACCAAAAGCAAGTACTGGAAGTGGTGTCAGGACAAACATCTATGAGAGGATCTTATCAACTCTGCGGAAAGGCTTTGTAATTGGTGATAAAAAATTTGAATTTCTTGCATTTTCATCGAGCCAGTTGCGGGATAATTCAGTGTGGATGTTTGCATCAAGACCTGGCCTTACTGCAAATGATATAAGAGCTTGGATGGGTGATTTTTCGCAGATCAAGAATGTCGCAAAATATGCTGCCAGACTTGGTCAATCTTTTGGTTCCTCCAGAGAGACTTTGAGTGTTCTTAGGCATGAGATTGAAGTTATTCCCGATGTAAAGGTTCATGGAACCAGCTATGTCTTTTCTGATGGAATTGGTAAAATATCTGGTGACTTTGCTCATAGAGTTGCCTCAAAATGTGGCCTTCAATATACCCCATCTGCTTTCCAGATTCGTTATGGTGGATATAAAGGTGTTGTGGGTGTTGATCCGGATTCATCAATGAAGTTGTCTTTGAGAAAGAGCATGTCGAAATATGAATCAGACAACATAAAGTTAGATGTCCTTGGATGGAGCAAATATCAGCCTTGTTATCTTAATCGTCAACTGATTACTCTCTTGTCTACACTTGGAGTGAAAGATGAAGTTCTCGAACAGAAGCAAAAGGAAGCTGTAGATCAGCTTGATGCTATCTTGCATGATTCTTTGAAGGCACAGGAGGCTTTGGAATTGATGTCTCCTGGAGAGAACACTAATATTCTCAAGGCAATGCTAAACTGTGGTTATAAGCCTGATGCTGAGCCCTTTCTTTCAATGATGTTGCAAACCTTCCGCGCATCCAAGTTGCTCGATTTGCGGACTAGATCAAGAATATTTATTCCAAATGGAAGAACAATGATGGGATGTTTGGATGAATCCAGAACCTTGGAATATGGTCAGGTGTTTGTTCAGTTTACTGGTGCTGGACATGGAGAGTTTTCTGACGATTTACATCCATTTAATAACAGCAGATCCACCAACAGTAATTTCATTCTGAAGGGAAATGTGGTTGTTGCAAAAAATCCATGCTTGCATCCTGGTGATATTCGTGTTTTAAAGGCTGTAAATGTTCGAGCGCTGCACCACATGGTAGATTGTGTTGTATTCCCTCAGAAAGGAAAAAG : ACCTCATCCGAATGAATGTTCTGGGAGTGATTTGGATGGGGATATCTACTTTGTTTGCTGGGATCAAGACATGATCCCGCCAAGGCAAGTCCAGCCGATGGAATATCCTCCAGCACCCAGCATACAGTTGGACCATGATGTCACAATTGAG : GAAGTTGAAGAGTACTTCACCAACTATATTGTGAATGACAGTTTGGGAATCATAGCAAATGCCCATGTCGTATTTGCAGACAGAGAACCTGATATGGCCATGAGTGATCCATGCAAAAAACTTGCTGAGCTCTTTTCAATTGCAGTGGACTTTCCAAAGACTGGTGTTCCCGCTGAAATACCATCTCAGTTGCGCCCTAAAGAATACCCAGACTTCATGGATAAGCCGGACAAGACCAGCTATATCTCAGAAAGAGTTATTGGAAAGCTTTTCAGGAAAGTGAAGGACAAAGCACCTCAGGCTAGCTCTATCGCGACCTTCACAAGAGATGTTGCAAGGAGATCATATGATGCTGATATGGAAGTTGATGGATTTGAAGATTACATTGACGAAGCTTTTGACTACAAAACTGAATATGACAACAAGCTGGGTAATTTAATGGACTACTATGGCATAAAAACAGAGGCTGAAATACTTAGTGGTGGCATTATGAAGGCATCAAAAACTTTTGACCGCAGAAAAGATGCTGAGGCCATTAGTGTTGCTGTGAGGGCCTTGAGGAAGGAGGCAAGAGCCTGGTTCAAGAGGCGTAATGATATAGATGACATGTTACCAAAGGCTTCGGCTTGGTACCACGTTACATATCATCCTACATATTGGGGTTGCTACAATCAGGGGTTGAAAAGAGCTCATTTCATTAGCTTTCCCTGGTGTGTTTATGACCAGCTAATCCAGATTAAGAAGGACAAAGCACGTAACAGGCCAGTTCTCAACTTGTCATCTCTCAGGGCTCAACTGAGTCACAGATTAGTGTTGAAATGAGATTCCAGTCGAGCGTTAAGCTGATATATATATAATGTAATAGGGTGTGATCATAAGAAAACTGTTATGCATTGTTGACTACCTTTTGTCTTTAAAACTGCATGAAGCTGCAACATATATGCAGTACTCTAAGAAACAGATGTACAGCTAAGTACTAATATGTATGTGATTTGAGTTTCATCTTTCTTCTAAACATGGTT</gDNA_template>
            <first_frame> E  I  F  F  T  Y  F  T  R  D  *  L  I  T  P  L  K  S  L  C  V  V  I  I  N  L  V  V  L  Q  F  Q  S  L  L  L  G  S  F  Y  F  A  * :   L  Q  G  V  F  Q  L  V  L  A  F  E  S  R  T  A  L  G  I  W  L  H  G  K  D  N  S  G  F  R  I  P  L  S  S  L  C  G  S  G  *  V  I  L  R  E  I  Y  R  I  W  N  C  M  C  I  G  G  *  T  V  Q  R  R  I  *  S  I  C  Q  S  S  I  C  R  Q  H  K  C  *  Q  N  H  H  F  G  *  *  Q  A  V  F  W  L  F  L  F  E  G  L  G  N  E  N  *  Y  C  P  T  A  G  I  C  G  S  D  G  W  H  N  F  E  F  R  M  S  D  I  R  *  Q  V  C  S  V  G  K  Y  R  S  F  N  S  I  W  H  W  I  E  E  I  F  F  L  F  I  *  W  F  S  *  L  *  T  S  A  F  I  *  K  Y  M  A  G  C  A  P  S  S  I  W  S  K  C  S  V  S  P  H  T   : V  I  W  C  S  S  D  L  *  E  T  *  K  L  L  L  *  L  L  *  G  N  S  *  *  S  V  G  E  D  N  R  F  P  S  I  L  D  R  A  I  F  *  L  M  F  A  V  P  *  G  C  S  S  S  K  F  R  G  K  F  F  P  L  C  R  T  *  K  Q  Y  Y  F  T  D  W  F  H  L  F  R  L  S  K  I  G  S  G  S  Q  C  P  A  S  G  R  N  F  N  S  L  Q  D  F  V  Q  N  *  F  F  G  T  A  W  M  H  T  W  A  S  I  K  C  L  L  F  P  I  S  *  S  S  K  E  K  C  G  M  H  *  A  C  L  R  E  T  V  L  Y  K  G  V  L  L  *  S  G  E  V  A  H  *  A  V  *  W  V  S  Q  G  *  T  T  S  K  I  S  V  H  H  F  R  *  W  V  G  V  C  K  K  G  P  S  N  T  M  Q  S  L  F  L  W  S  R  G  *  C  F  Q  S  G  S  P  Q  L  F  *  R  H  R  *  L  S  S  C  F  F  C  *  *  G  V  G  E  T  V  F  Y  R  L  I  T  K  S  K  Y  W  K  W  C  Q  D  K  H  L  *  E  D  L  I  N  S  A  E  R  L  C  N  W  *  *  K  I  *  I  S  C  I  F  I  E  P  V  A  G  *  F  S  V  D  V  C  I  K  T  W  P  Y  C  K  *  Y  K  S  L  D  G  *  F  F  A  D  Q  E  C  R  K  I  C  C  Q  T  W  S  I  F  W  F  L  Q  R  D  F  E  C  S  *  A  *  D  *  S  Y  S  R  C  K  G  S  W  N  Q  L  C  L  F  *  W  N  W  *  N  I  W  *  L  C  S  *  S  C  L  K  M  W  P  S  I  Y  P  I  C  F  P  D  S  L  W  W  I  *  R  C  C  G  C  *  S  G  F  I  N  E  V  V  F  E  K  E  H  V  E  I  *  I  R  Q  H  K  V  R  C  P  W  M  E  Q  I  S  A  L  L  S  *  S  S  T  D  Y  S  L  V  Y  T  W  S  E  R  *  S  S  R  T  E  A  K  G  S  C  R  S  A  *  C  Y  L  A  *  F  F  E  G  T  G  G  F  G  I  D  V  S  W  R  E  H  *  Y  S  Q  G  N  A  K  L  W  L  *  A  *  C  *  A  L  S  F  N  D  V  A  N  L  P  R  I  Q  V  A  R  F  A  D  *  I  K  N  I  Y  S  K  W  K  N  N  D  G  M  F  G  *  I  Q  N  L  G  I  W  S  G  V  C  S  V  Y  W  C  W  T  W  R  V  F  *  R  F  T  S  I  *  *  Q  Q  I  H  Q  Q  *  F  H  S  E  G  K  C  G  C  C  K  K  S  M  L  A  S  W  *  Y  S  C  F  K  G  C  K  C  S  S  A  A  P  H  G  R  L  C  C  I  P  S  E  R  K  K  :  T  S  S  E  *  M  F  W  E  *  F  G  W  G  Y  L  L  C  L  L  G  S  R  H  D  P  A  K  A  S  P  A  D  G  I  S  S  S  T  Q  H  T  V  G  P  *  C  H  N  *   : G  S  *  R  V  L  H  Q  L  Y  C  E  *  Q  F  G  N  H  S  K  C  P  C  R  I  C  R  Q  R  T  *  Y  G  H  E  *  S  M  Q  K  T  C  *  A  L  F  N  C  S  G  L  S  K  D  W  C  S  R  *  N  T  I  S  V  A  P  *  R  I  P  R  L  H  G  *  A  G  Q  D  Q  L  Y  L  R  K  S  Y  W  K  A  F  Q  E  S  E  G  Q  S  T  S  G  *  L  Y  R  D  L  H  K  R  C  C  K  E  I  I  *  C  *  Y  G  S  *  W  I  *  R  L  H  *  R  S  F  *  L  Q  N  *  I  *  Q  Q  A  G  *  F  N  G  L  L  W  H  K  N  R  G  *  N  T  *  W  W  H  Y  E  G  I  K  N  F  *  P  Q  K  R  C  *  G  H  *  C  C  C  E  G  L  E  E  G  G  K  S  L  V  Q  E  A  *  *  Y  R  *  H  V  T  K  G  F  G  L  V  P  R  Y  I  S  S  Y  I  L  G  L  L  Q  S  G  V  E  K  S  S  F  H  *  L  S  L  V  C  L  *  P  A  N  P  D  *  E  G  Q  S  T  *  Q  A  S  S  Q  L  V  I  S  Q  G  S  T  E  S  Q  I  S  V  E  M  R  F  Q  S  S  V  K  L  I  Y  I  *  C  N  R  V  *  S  *  E  N  C  Y  A  L  L  T  T  F  C  L  *  N  C  M  K  L  Q  H  I  C  S  T  L  R  N  R  C  T  A  K  Y  *  Y  V  C  D  L  S  F  I  F  L  L  N  M  V </first_frame>
            <second_frame>  K  Y  S  L  L  T  S  P  G  I  D  S  S  L  P  S  S  L  C  V  L  *  *  *  I  W  L  C  F  S  F  S  H  Y  C  W  V  V  F  I  L  H   : N  F  R  G  Y  S  S  W  C  *  H  L  K  V  E  L  H  L  E  F  G  Y  M  G  K  T  I  Q  V  F  G  F  P  Y  L  L  S  A  E  V  V  K  S  F  L  E  K  Y  T  G  Y  G  T  V  C  A  L  E  V  K  Q  S  K  G  G  S  R  A  F  A  K  V  Q  F  A  D  N  I  S  A  D  K  I  I  T  L  A  N  N  R  L  Y  F  G  S  S  Y  L  K  A  W  E  M  K  T  D  I  V  Q  L  R  A  Y  V  D  Q  M  D  G  I  T  L  N  F  G  C  Q  I  S  D  D  K  F  A  V  L  G  S  T  E  V  S  I  Q  F  G  I  G  L  K  K  F  F  F  F  L  S  S  G  S  A  D  Y  K  L  Q  L  S  Y  E  N  I  W  Q  V  V  L  H  R  P  Y  G  Q  N  A  Q  F  L  L  I  Q  :  L  F  G  A  P  R  I  Y  K  R  L  E  N  S  C  Y  S  F  F  K  E  T  P  D  D  Q  W  V  R  T  T  D  F  P  P  S  W  I  G  L  S  S  S  L  C  L  Q  F  R  R  G  V  R  L  P  N  F  E  E  S  F  F  H  Y  A  E  R  E  N  N  I  T  L  Q  T  G  F  T  F  F  V  S  Q  K  S  A  L  V  P  N  V  Q  P  P  E  G  I  S  I  P  Y  K  I  L  F  K  I  S  S  L  V  Q  H  G  C  I  P  G  P  A  L  N  V  Y  F  F  R  L  V  D  P  R  R  R  N  V  A  C  I  E  H  A  L  E  K  L  Y  Y  I  K  E  C  C  Y  D  P  V  R  W  L  T  E  Q  Y  D  G  Y  L  K  G  R  Q  P  P  K  S  P  S  I  T  L  D  D  G  L  V  Y  V  R  R  V  L  V  T  P  C  K  V  Y  F  C  G  P  E  V  N  V  S  N  R  V  L  R  N  Y  S  E  D  I  D  N  F  L  R  V  S  F  V  D  E  E  W  E  K  L  Y  S  T  D  L  L  P  K  A  S  T  G  S  G  V  R  T  N  I  Y  E  R  I  L  S  T  L  R  K  G  F  V  I  G  D  K  K  F  E  F  L  A  F  S  S  S  Q  L  R  D  N  S  V  W  M  F  A  S  R  P  G  L  T  A  N  D  I  R  A  W  M  G  D  F  S  Q  I  K  N  V  A  K  Y  A  A  R  L  G  Q  S  F  G  S  S  R  E  T  L  S  V  L  R  H  E  I  E  V  I  P  D  V  K  V  H  G  T  S  Y  V  F  S  D  G  I  G  K  I  S  G  D  F  A  H  R  V  A  S  K  C  G  L  Q  Y  T  P  S  A  F  Q  I  R  Y  G  G  Y  K  G  V  V  G  V  D  P  D  S  S  M  K  L  S  L  R  K  S  M  S  K  Y  E  S  D  N  I  K  L  D  V  L  G  W  S  K  Y  Q  P  C  Y  L  N  R  Q  L  I  T  L  L  S  T  L  G  V  K  D  E  V  L  E  Q  K  Q  K  E  A  V  D  Q  L  D  A  I  L  H  D  S  L  K  A  Q  E  A  L  E  L  M  S  P  G  E  N  T  N  I  L  K  A  M  L  N  C  G  Y  K  P  D  A  E  P  F  L  S  M  M  L  Q  T  F  R  A  S  K  L  L  D  L  R  T  R  S  R  I  F  I  P  N  G  R  T  M  M  G  C  L  D  E  S  R  T  L  E  Y  G  Q  V  F  V  Q  F  T  G  A  G  H  G  E  F  S  D  D  L  H  P  F  N  N  S  R  S  T  N  S  N  F  I  L  K  G  N  V  V  V  A  K  N  P  C  L  H  P  G  D  I  R  V  L  K  A  V  N  V  R  A  L  H  H  M  V  D  C  V  V  F  P  Q  K  G  K  R :   P  H  P  N  E  C  S  G  S  D  L  D  G  D  I  Y  F  V  C  W  D  Q  D  M  I  P  P  R  Q  V  Q  P  M  E  Y  P  P  A  P  S  I  Q  L  D  H  D  V  T  I  E  :  E  V  E  E  Y  F  T  N  Y  I  V  N  D  S  L  G  I  I  A  N  A  H  V  V  F  A  D  R  E  P  D  M  A  M  S  D  P  C  K  K  L  A  E  L  F  S  I  A  V  D  F  P  K  T  G  V  P  A  E  I  P  S  Q  L  R  P  K  E  Y  P  D  F  M  D  K  P  D  K  T  S  Y  I  S  E  R  V  I  G  K  L  F  R  K  V  K  D  K  A  P  Q  A  S  S  I  A  T  F  T  R  D  V  A  R  R  S  Y  D  A  D  M  E  V  D  G  F  E  D  Y  I  D  E  A  F  D  Y  K  T  E  Y  D  N  K  L  G  N  L  M  D  Y  Y  G  I  K  T  E  A  E  I  L  S  G  G  I  M  K  A  S  K  T  F  D  R  R  K  D  A  E  A  I  S  V  A  V  R  A  L  R  K  E  A  R  A  W  F  K  R  R  N  D  I  D  D  M  L  P  K  A  S  A  W  Y  H  V  T  Y  H  P  T  Y  W  G  C  Y  N  Q  G  L  K  R  A  H  F  I  S  F  P  W  C  V  Y  D  Q  L  I  Q  I  K  K  D  K  A  R  N  R  P  V  L  N  L  S  S  L  R  A  Q  L  S  H  R  L  V  L  K  *  D  S  S  R  A  L  S  *  Y  I  Y  N  V  I  G  C  D  H  K  K  T  V  M  H  C  *  L  P  F  V  F  K  T  A  *  S  C  N  I  Y  A  V  L  *  E  T  D  V  Q  L  S  T  N  M  Y  V  I  *  V  S  S  F  F  *  T  W   </second_frame>
            <third_frame>   N  I  L  Y  L  L  H  Q  G  L  T  H  H  S  P  Q  V  F  V  C  C  D  N  K  F  G  C  A  S  V  S  V  T  T  A  G  *  F  L  F  C  I  :  T  S  G  G  I  P  V  G  V  S  I  *  K  S  N  C  T  W  N  L  A  T  W  E  R  Q  F  R  F  S  D  S  L  I  F  S  L  R  K  W  L  S  H  S  *  R  N  I  Q  D  M  E  L  Y  V  H  W  R  L  N  S  P  K  E  D  L  E  H  L  P  K  F  N  L  P  T  T  *  V  L  T  K  S  S  L  W  L  I  T  G  C  I  L  A  L  L  I  *  R  L  G  K  *  K  L  I  L  S  N  C  G  H  M  W  I  R  W  M  A  *  L  *  I  S  D  V  R  Y  Q  M  T  S  L  Q  C  W  E  V  Q  K  F  Q  F  N  L  A  L  D  *  R  N  F  F  S  F  Y  L  V  V  Q  L  T  I  N  F  S  F  H  M  K  I  Y  G  R  L  C  S  I  V  H  M  V  K  M  L  S  F  S  S  Y  S :   Y  L  V  L  L  G  S  I  R  D  L  K  T  P  V  I  A  S  L  R  K  L  L  M  I  S  G  *  G  Q  Q  I  S  L  H  L  G  *  G  Y  L  L  A  Y  V  C  S  S  V  G  V  F  V  F  Q  I  S  R  K  V  F  S  T  M  Q  N  V  K  T  I  L  L  Y  R  L  V  S  P  F  S  S  L  K  N  R  L  W  F  P  M  S  S  L  R  K  E  F  Q  F  P  T  R  F  C  S  K  L  V  L  W  Y  S  M  D  A  Y  L  G  Q  H  *  M  S  T  F  S  D  *  L  I  L  E  G  E  M  W  H  A  L  S  M  P  *  R  N  C  T  I  *  R  S  A  V  M  I  R  *  G  G  S  L  S  S  M  M  G  I  S  R  V  D  N  L  Q  N  L  R  P  S  L  *  M  M  G  W  C  M  *  E  G  S  *  *  H  H  A  K  F  I  F  V  V  Q  R  L  M  F  P  I  G  F  S  A  I  I  L  K  T  *  I  T  F  F  V  F  L  L  L  M  R  S  G  R  N  C  I  L  Q  T  Y  Y  Q  K  Q  V  L  E  V  V  S  G  Q  T  S  M  R  G  S  Y  Q  L  C  G  K  A  L  *  L  V  I  K  N  L  N  F  L  H  F  H  R  A  S  C  G  I  I  Q  C  G  C  L  H  Q  D  L  A  L  L  Q  M  I  *  E  L  G  W  V  I  F  R  R  S  R  M  S  Q  N  M  L  P  D  L  V  N  L  L  V  P  P  E  R  L  *  V  F  L  G  M  R  L  K  L  F  P  M  *  R  F  M  E  P  A  M  S  F  L  M  E  L  V  K  Y  L  V  T  L  L  I  E  L  P  Q  N  V  A  F  N  I  P  H  L  L  S  R  F  V  M  V  D  I  K  V  L  W  V  L  I  R  I  H  Q  *  S  C  L  *  E  R  A  C  R  N  M  N  Q  T  T  *  S  *  M  S  L  D  G  A  N  I  S  L  V  I  L  I  V  N  *  L  L  S  C  L  H  L  E  *  K  M  K  F  S  N  R  S  K  R  K  L  *  I  S  L  M  L  S  C  M  I  L  *  R  H  R  R  L  W  N  *  C  L  L  E  R  T  L  I  F  S  R  Q  C  *  T  V  V  I  S  L  M  L  S  P  F  F  Q  *  C  C  K  P  S  A  H  P  S  C  S  I  C  G  L  D  Q  E  Y  L  F  Q  M  E  E  Q  *  W  D  V  W  M  N  P  E  P  W  N  M  V  R  C  L  F  S  L  L  V  L  D  M  E  S  F  L  T  I  Y  I  H  L  I  T  A  D  P  P  T  V  I  S  F  *  R  E  M  W  L  L  Q  K  I  H  A  C  I  L  V  I  F  V  F  *  R  L  *  M  F  E  R  C  T  T  W  *  I  V  L  Y  S  L  R  K  E  K   : D  L  I  R  M  N  V  L  G  V  I  W  M  G  I  S  T  L  F  A  G  I  K  T  *  S  R  Q  G  K  S  S  R  W  N  I  L  Q  H  P  A  Y  S  W  T  M  M  S  Q  L  R :   K  L  K  S  T  S  P  T  I  L  *  M  T  V  W  E  S  *  Q  M  P  M  S  Y  L  Q  T  E  N  L  I  W  P  *  V  I  H  A  K  N  L  L  S  S  F  Q  L  Q  W  T  F  Q  R  L  V  F  P  L  K  Y  H  L  S  C  A  L  K  N  T  Q  T  S  W  I  S  R  T  R  P  A  I  S  Q  K  E  L  L  E  S  F  S  G  K  *  R  T  K  H  L  R  L  A  L  S  R  P  S  Q  E  M  L  Q  G  D  H  M  M  L  I  W  K  L  M  D  L  K  I  T  L  T  K  L  L  T  T  K  L  N  M  T  T  S  W  V  I  *  W  T  T  M  A  *  K  Q  R  L  K  Y  L  V  V  A  L  *  R  H  Q  K  L  L  T  A  E  K  M  L  R  P  L  V  L  L  *  G  P  *  G  R  R  Q  E  P  G  S  R  G  V  M  I  *  M  T  C  Y  Q  R  L  R  L  G  T  T  L  H  I  I  L  H  I  G  V  A  T  I  R  G  *  K  E  L  I  S  L  A  F  P  G  V  F  M  T  S  *  S  R  L  R  R  T  K  H  V  T  G  Q  F  S  T  C  H  L  S  G  L  N  *  V  T  D  *  C  *  N  E  I  P  V  E  R  *  A  D  I  Y  I  M  *  *  G  V  I  I  R  K  L  L  C  I  V  D  Y  L  L  S  L  K  L  H  E  A  A  T  Y  M  Q  Y  S  K  K  Q  M  Y  S  *  V  L  I  C  M  *  F  E  F  H  L  S  S  K  H  G  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="97472" stop="98014"/>
                    <exon start="100713" stop="102577"/>
                    <exon start="103213" stop="103363"/>
                    <exon start="103833" stop="104654"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>3378</number_coding_nucleotides>
                  <number_encoded_amino_acids>1126</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>HLKVELHLEFGYMGKTIQVFGFPYLLSAEVVKSFLEKYTGYGTVCALEVKQSKGGSRAFAKVQFADNISADKIITLANNRLYFGSSYLKAWEMKTDIVQLRAYVDQMDGITLNFGCQISDDKFAVLGSTEVSIQFGIGLKKFFFFLSSGSADYKLQLSYENIWQVVLHRPYGQNAQFLLIQLFGAPRIYKRLENSCYSFFKETPDDQWVRTTDFPPSWIGLSSSLCLQFRRGVRLPNFEESFFHYAERENNITLQTGFTFFVSQKSALVPNVQPPEGISIPYKILFKISSLVQHGCIPGPALNVYFFRLVDPRRRNVACIEHALEKLYYIKECCYDPVRWLTEQYDGYLKGRQPPKSPSITLDDGLVYVRRVLVTPCKVYFCGPEVNVSNRVLRNYSEDIDNFLRVSFVDEEWEKLYSTDLLPKASTGSGVRTNIYERILSTLRKGFVIGDKKFEFLAFSSSQLRDNSVWMFASRPGLTANDIRAWMGDFSQIKNVAKYAARLGQSFGSSRETLSVLRHEIEVIPDVKVHGTSYVFSDGIGKISGDFAHRVASKCGLQYTPSAFQIRYGGYKGVVGVDPDSSMKLSLRKSMSKYESDNIKLDVLGWSKYQPCYLNRQLITLLSTLGVKDEVLEQKQKEAVDQLDAILHDSLKAQEALELMSPGENTNILKAMLNCGYKPDAEPFLSMMLQTFRASKLLDLRTRSRIFIPNGRTMMGCLDESRTLEYGQVFVQFTGAGHGEFSDDLHPFNNSRSTNSNFILKGNVVVAKNPCLHPGDIRVLKAVNVRALHHMVDCVVFPQKGKRPHPNECSGSDLDGDIYFVCWDQDMIPPRQVQPMEYPPAPSIQLDHDVTIEEVEEYFTNYIVNDSLGIIANAHVVFADREPDMAMSDPCKKLAELFSIAVDFPKTGVPAEIPSQLRPKEYPDFMDKPDKTSYISERVIGKLFRKVKDKAPQASSIATFTRDVARRSYDADMEVDGFEDYIDEAFDYKTEYDNKLGNLMDYYGIKTEAEILSGGIMKASKTFDRRKDAEAISVAVRALRKEARAWFKRRNDIDDMLPKASAWYHVTYHPTYWGCYNQGLKRAHFISFPWCVYDQLIQIKKDKARNRPVLNLSSLRAQLSHRLVLK*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="108888" PGL_stop="105289"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="108888" e_stop="108672"/>
            <exon e_start="108475" e_stop="108384"/>
            <exon e_start="107953" e_stop="107846"/>
            <exon e_start="107764" e_stop="107682"/>
            <exon e_start="107552" e_stop="107419"/>
            <exon e_start="107275" e_stop="107226"/>
            <exon e_start="107077" e_stop="106985"/>
            <exon e_start="106169" e_stop="105520"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.918" acc_prob="1.000" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-intron don_prob="0.513" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.814" e_score="1.000"/>
          <exon-intron don_prob="0.720" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.999" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108888" e_stop="108672" e_length="217"/>
          </exon>
          <intron i_serial="1" don_prob="0.918" acc_prob="1.000">
            <gDNA_intron_boundary i_start="108671" i_stop="108476" i_length="196"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="108475" e_stop="108384" e_length="92"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="108383" i_stop="107954" i_length="430"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107953" e_stop="107846" e_length="108"/>
          </exon>
          <intron i_serial="3" don_prob="0.513" acc_prob="0.980">
            <gDNA_intron_boundary i_start="107845" i_stop="107765" i_length="81"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="107764" e_stop="107682" e_length="83"/>
          </exon>
          <intron i_serial="4" don_prob="0.990" acc_prob="0.814">
            <gDNA_intron_boundary i_start="107681" i_stop="107553" i_length="129"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="107552" e_stop="107419" e_length="134"/>
          </exon>
          <intron i_serial="5" don_prob="0.720" acc_prob="0.989">
            <gDNA_intron_boundary i_start="107418" i_stop="107276" i_length="143"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="107275" e_stop="107226" e_length="50"/>
          </exon>
          <intron i_serial="6" don_prob="0.923" acc_prob="0.995">
            <gDNA_intron_boundary i_start="107225" i_stop="107078" i_length="148"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="107077" e_stop="106985" e_length="93"/>
          </exon>
          <intron i_serial="7" don_prob="0.952" acc_prob="0.999">
            <gDNA_intron_boundary i_start="106984" i_stop="106170" i_length="815"/>
          </intron>
          <exon e_serial="8" e_score="0.989">
            <gDNA_exon_boundary e_start="106169" e_stop="105520" e_length="650"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108888" stop="108672"/>
              <exon start="108475" stop="108384"/>
              <exon start="107953" stop="107846"/>
              <exon start="107764" stop="107682"/>
              <exon start="107552" stop="107419"/>
              <exon start="107275" stop="107226"/>
              <exon start="107077" stop="106985"/>
              <exon start="106169" stop="105520"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U323104" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CTTTTAAAGAATGGCTGGCAATTTATGTATAACTCTCACTCAATCTTCACCCTTTTCACCAAAACTTTATTATTCATCAAAACCCCTTCTTCAGAAATCACATAGAATCTCTATTGCCCCATTTCTCAAATTTCAAGATTCAGCTCCTAGTCAAGGTTCTACAAGAGGGTTCACTACTATATGTTTTTCTAGTCCCAGAAATGGTCCTGGTTATAAA : GGAGGTGGACCTGATTGGCCAATTTTGAGACGCTGGGATGTGCCATGGAATTGGCAAACTGTTTCACTTTCTTCACTTGCATGTGGATTAAG : TTTTGTTTTGACAGGACTAATCGAGGCAGCGTCAATACCCTATGTAGGACTTGATGTAGAAGCATTGAGCTTGGACGAGAAGGCTGAAATTTTGTTCGCTGATCAAGC : TATAACAACTGCAGTTGTGCTAATAGTCCTTTATGCTCTCACCAAGTCATCTCAACCACTTCCTGATGACATATATCGTTATG : ATCTGAAGGAACCTTTCAATCTCCAGAGAGGATGGCTTTTGTGGGCTGGAATTGGTCTAGGGGGAGCAATAGGTGCAATTGCTTTAACAGGAGTAGCAATGTCTGCTTTCAATGGTGAGCCGCCACAAAGAGAG : ACTGATGCGCTTGCTCGGTTACTCCCATTGATAGGCTCCTCAAGTATCAG : CACTGCTTCTCTGCTGGGCATTACCGGTGTACTTGCTCCAATTCTCGAGGAGACTGTGTTTAGAGGATTTTTTATGGTCTCTCTGACTAAGTG : GGTACCTACACCGCTTGCAGCGGTTATTAGTGGTGCTGTATTTGCTCTTGCACATCTCACTCCTGGACAATTTCCTCAGTTGTTTGTTCTTGGTATTGCTTCCATTTTCTTAAATGTATACGACACTGAACGAAAGTAGAGGAAAAGCAGAAATTACAAAAAGGAATAACATAATTGGGTTTTACTTCTGAAAGTTCTCAAAAAGATCTATTTATGAAGGAGAAAATAGTTATAGTAAGAATTGATTTTACCTTGTAAGACATGATCAACAACTTTCTGTAGTTTTTGAGCTTTTATTCAATTTTAGAGGAATGAAATGAATTCAAACATGGTAAAAATGGATACAAAGGGTTCATGTAGTGTACCTCTACTAGTTTGGAATTGAAGCACCGTTGAGGCAAATACTTAAATTGATTCTACCCTTTCTTATAGTGCATTTTTCTTCATGTTTAATCTGAGCTGAAAAATGACATGCTTTCAGGGACTGCTCTGGGTTTTTCTTATGCTCAAACGCGAAACCTCCTAACCCCAATCACAATTCATGCTTTATGGAACTCTGGTGTTATTTTGCTTCTTACCTTCCTTCAGGTAATCTGTTCCTCATTGTCATTTAAAGCATGGCAACAGTATTTGTTGCCATGTTGCTTTCT</gDNA_template>
            <first_frame> L  L  K  N  G  W  Q  F  M  Y  N  S  H  S  I  F  T  L  F  T  K  T  L  L  F  I  K  T  P  S  S  E  I  T  *  N  L  Y  C  P  I  S  Q  I  S  R  F  S  S  *  S  R  F  Y  K  R  V  H  Y  Y  M  F  F  *  S  Q  K  W  S  W  L  *   : R  R  W  T  *  L  A  N  F  E  T  L  G  C  A  M  E  L  A  N  C  F  T  F  F  T  C  M  W  I  K  :  F  C  F  D  R  T  N  R  G  S  V  N  T  L  C  R  T  *  C  R  S  I  E  L  G  R  E  G  *  N  F  V  R  *  S  S  :  Y  N  N  C  S  C  A  N  S  P  L  C  S  H  Q  V  I  S  T  T  S  *  *  H  I  S  L  * :   S  E  G  T  F  Q  S  P  E  R  M  A  F  V  G  W  N  W  S  R  G  S  N  R  C  N  C  F  N  R  S  S  N  V  C  F  Q  W  *  A  A  T  K  R   : D  *  C  A  C  S  V  T  P  I  D  R  L  L  K  Y  Q  :  H  C  F  S  A  G  H  Y  R  C  T  C  S  N  S  R  G  D  C  V  *  R  I  F  Y  G  L  S  D  *  V  :  G  T  Y  T  A  C  S  G  Y  *  W  C  C  I  C  S  C  T  S  H  S  W  T  I  S  S  V  V  C  S  W  Y  C  F  H  F  L  K  C  I  R  H  *  T  K  V  E  E  K  Q  K  L  Q  K  G  I  T  *  L  G  F  T  S  E  S  S  Q  K  D  L  F  M  K  E  K  I  V  I  V  R  I  D  F  T  L  *  D  M  I  N  N  F  L  *  F  L  S  F  Y  S  I  L  E  E  *  N  E  F  K  H  G  K  N  G  Y  K  G  F  M  *  C  T  S  T  S  L  E  L  K  H  R  *  G  K  Y  L  N  *  F  Y  P  F  L  *  C  I  F  L  H  V  *  S  E  L  K  N  D  M  L  S  G  T  A  L  G  F  S  Y  A  Q  T  R  N  L  L  T  P  I  T  I  H  A  L  W  N  S  G  V  I  L  L  L  T  F  L  Q  V  I  C  S  S  L  S  F  K  A  W  Q  Q  Y  L  L  P  C  C  F   </first_frame>
            <second_frame>  F  *  R  M  A  G  N  L  C  I  T  L  T  Q  S  S  P  F  S  P  K  L  Y  Y  S  S  K  P  L  L  Q  K  S  H  R  I  S  I  A  P  F  L  K  F  Q  D  S  A  P  S  Q  G  S  T  R  G  F  T  T  I  C  F  S  S  P  R  N  G  P  G  Y  K  :  G  G  G  P  D  W  P  I  L  R  R  W  D  V  P  W  N  W  Q  T  V  S  L  S  S  L  A  C  G  L  S :   F  V  L  T  G  L  I  E  A  A  S  I  P  Y  V  G  L  D  V  E  A  L  S  L  D  E  K  A  E  I  L  F  A  D  Q  A :   I  T  T  A  V  V  L  I  V  L  Y  A  L  T  K  S  S  Q  P  L  P  D  D  I  Y  R  Y   : D  L  K  E  P  F  N  L  Q  R  G  W  L  L  W  A  G  I  G  L  G  G  A  I  G  A  I  A  L  T  G  V  A  M  S  A  F  N  G  E  P  P  Q  R  E  :  T  D  A  L  A  R  L  L  P  L  I  G  S  S  S  I  S :   T  A  S  L  L  G  I  T  G  V  L  A  P  I  L  E  E  T  V  F  R  G  F  F  M  V  S  L  T  K  W :   V  P  T  P  L  A  A  V  I  S  G  A  V  F  A  L  A  H  L  T  P  G  Q  F  P  Q  L  F  V  L  G  I  A  S  I  F  L  N  V  Y  D  T  E  R  K  *  R  K  S  R  N  Y  K  K  E  *  H  N  W  V  L  L  L  K  V  L  K  K  I  Y  L  *  R  R  K  *  L  *  *  E  L  I  L  P  C  K  T  *  S  T  T  F  C  S  F  *  A  F  I  Q  F  *  R  N  E  M  N  S  N  M  V  K  M  D  T  K  G  S  C  S  V  P  L  L  V  W  N  *  S  T  V  E  A  N  T  *  I  D  S  T  L  S  Y  S  A  F  F  F  M  F  N  L  S  *  K  M  T  C  F  Q  G  L  L  W  V  F  L  M  L  K  R  E  T  S  *  P  Q  S  Q  F  M  L  Y  G  T  L  V  L  F  C  F  L  P  S  F  R  *  S  V  P  H  C  H  L  K  H  G  N  S  I  C  C  H  V  A  F  </second_frame>
            <third_frame>   F  K  E  W  L  A  I  Y  V  *  L  S  L  N  L  H  P  F  H  Q  N  F  I  I  H  Q  N  P  F  F  R  N  H  I  E  S  L  L  P  H  F  S  N  F  K  I  Q  L  L  V  K  V  L  Q  E  G  S  L  L  Y  V  F  L  V  P  E  M  V  L  V  I  K :   E  V  D  L  I  G  Q  F  *  D  A  G  M  C  H  G  I  G  K  L  F  H  F  L  H  L  H  V  D  *   : V  L  F  *  Q  D  *  S  R  Q  R  Q  Y  P  M  *  D  L  M  *  K  H  *  A  W  T  R  R  L  K  F  C  S  L  I  K   : L  *  Q  L  Q  L  C  *  *  S  F  M  L  S  P  S  H  L  N  H  F  L  M  T  Y  I  V  M  :  I  *  R  N  L  S  I  S  R  E  D  G  F  C  G  L  E  L  V  *  G  E  Q  *  V  Q  L  L  *  Q  E  *  Q  C  L  L  S  M  V  S  R  H  K  E  R :   L  M  R  L  L  G  Y  S  H  *  *  A  P  Q  V  S   : A  L  L  L  C  W  A  L  P  V  Y  L  L  Q  F  S  R  R  L  C  L  E  D  F  L  W  S  L  *  L  S   : G  Y  L  H  R  L  Q  R  L  L  V  V  L  Y  L  L  L  H  I  S  L  L  D  N  F  L  S  C  L  F  L  V  L  L  P  F  S  *  M  Y  T  T  L  N  E  S  R  G  K  A  E  I  T  K  R  N  N  I  I  G  F  Y  F  *  K  F  S  K  R  S  I  Y  E  G  E  N  S  Y  S  K  N  *  F  Y  L  V  R  H  D  Q  Q  L  S  V  V  F  E  L  L  F  N  F  R  G  M  K  *  I  Q  T  W  *  K  W  I  Q  R  V  H  V  V  Y  L  Y  *  F  G  I  E  A  P  L  R  Q  I  L  K  L  I  L  P  F  L  I  V  H  F  S  S  C  L  I  *  A  E  K  *  H  A  F  R  D  C  S  G  F  F  L  C  S  N  A  K  P  P  N  P  N  H  N  S  C  F  M  E  L  W  C  Y  F  A  S  Y  L  P  S  G  N  L  F  L  I  V  I  *  S  M  A  T  V  F  V  A  M  L  L  S </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108881" stop="108672"/>
                    <exon start="108475" stop="108384"/>
                    <exon start="107953" stop="107846"/>
                    <exon start="107764" stop="107682"/>
                    <exon start="107552" stop="107419"/>
                    <exon start="107275" stop="107226"/>
                    <exon start="107077" stop="106985"/>
                    <exon start="106169" stop="106031"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>906</number_coding_nucleotides>
                  <number_encoded_amino_acids>302</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RMAGNLCITLTQSSPFSPKLYYSSKPLLQKSHRISIAPFLKFQDSAPSQGSTRGFTTICFSSPRNGPGYKGGGPDWPILRRWDVPWNWQTVSLSSLACGLSFVLTGLIEAASIPYVGLDVEALSLDEKAEILFADQAITTAVVLIVLYALTKSSQPLPDDIYRYDLKEPFNLQRGWLLWAGIGLGGAIGAIALTGVAMSAFNGEPPQRETDALARLLPLIGSSSISTASLLGITGVLAPILEETVFRGFFMVSLTKWVPTPLAAVISGAVFALAHLTPGQFPQLFVLGIASIFLNVYDTERK*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="105716" stop="105522"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>195</number_coding_nucleotides>
                  <number_encoded_amino_acids>65</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SELKNDMLSGTALGFSYAQTRNLLTPITIHALWNSGVILLLTFLQVICSSLSFKAWQQYLLPCCF</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="108429" e_stop="108384"/>
            <exon e_start="107939" e_stop="107846"/>
            <exon e_start="107764" e_stop="107682"/>
            <exon e_start="107552" e_stop="107419"/>
            <exon e_start="107275" e_stop="107226"/>
            <exon e_start="107077" e_stop="106985"/>
            <exon e_start="106169" e_stop="106078"/>
            <exon e_start="105688" e_stop="105582"/>
            <exon e_start="105471" e_stop="105289"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.000" acc_prob="0.983" e_score="1.000"/>
          <exon-intron don_prob="0.513" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.814" e_score="1.000"/>
          <exon-intron don_prob="0.720" acc_prob="0.989" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.952" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.698" acc_prob="0.956" e_score="1.000"/>
          <exon-intron don_prob="0.931" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="108429" e_stop="108384" e_length="46"/>
          </exon>
          <intron i_serial="1" don_prob="0.000" acc_prob="0.983">
            <gDNA_intron_boundary i_start="108383" i_stop="107940" i_length="444"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="107939" e_stop="107846" e_length="94"/>
          </exon>
          <intron i_serial="2" don_prob="0.513" acc_prob="0.980">
            <gDNA_intron_boundary i_start="107845" i_stop="107765" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="107764" e_stop="107682" e_length="83"/>
          </exon>
          <intron i_serial="3" don_prob="0.990" acc_prob="0.814">
            <gDNA_intron_boundary i_start="107681" i_stop="107553" i_length="129"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="107552" e_stop="107419" e_length="134"/>
          </exon>
          <intron i_serial="4" don_prob="0.720" acc_prob="0.989">
            <gDNA_intron_boundary i_start="107418" i_stop="107276" i_length="143"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="107275" e_stop="107226" e_length="50"/>
          </exon>
          <intron i_serial="5" don_prob="0.923" acc_prob="0.995">
            <gDNA_intron_boundary i_start="107225" i_stop="107078" i_length="148"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="107077" e_stop="106985" e_length="93"/>
          </exon>
          <intron i_serial="6" don_prob="0.952" acc_prob="0.999">
            <gDNA_intron_boundary i_start="106984" i_stop="106170" i_length="815"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="106169" e_stop="106078" e_length="92"/>
          </exon>
          <intron i_serial="7" don_prob="0.698" acc_prob="0.956">
            <gDNA_intron_boundary i_start="106077" i_stop="105689" i_length="389"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="105688" e_stop="105582" e_length="107"/>
          </exon>
          <intron i_serial="8" don_prob="0.931" acc_prob="0.992">
            <gDNA_intron_boundary i_start="105581" i_stop="105472" i_length="110"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="105471" e_stop="105289" e_length="183"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="108429" stop="108384"/>
              <exon start="107939" stop="107846"/>
              <exon start="107764" stop="107682"/>
              <exon start="107552" stop="107419"/>
              <exon start="107275" stop="107226"/>
              <exon start="107077" stop="106985"/>
              <exon start="106169" stop="106078"/>
              <exon start="105688" stop="105582"/>
              <exon start="105471" stop="105289"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U337771" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="2" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGAATTGGCAAACTGTTTCACTTTCTTCACTTGCATGTGGATTAAG : GACTAATCGAGGCAGCGTCAATACCCTATGTAGGACTTGATGTAGAAGCATTGAGCTTGGACGAGAAGGCTGAAATTTTGTTCGCTGATCAAGC : TATAACAACTGCAGTTGTGCTAATAGTCCTTTATGCTCTCACCAAGTCATCTCAACCACTTCCTGATGACATATATCGTTATG : ATCTGAAGGAACCTTTCAATCTCCAGAGAGGATGGCTTTTGTGGGCTGGAATTGGTCTAGGGGGAGCAATAGGTGCAATTGCTTTAACAGGAGTAGCAATGTCTGCTTTCAATGGTGAGCCGCCACAAAGAGAG : ACTGATGCGCTTGCTCGGTTACTCCCATTGATAGGCTCCTCAAGTATCAG : CACTGCTTCTCTGCTGGGCATTACCGGTGTACTTGCTCCAATTCTCGAGGAGACTGTGTTTAGAGGATTTTTTATGGTCTCTCTGACTAAGTG : GGTACCTACACCGCTTGCAGCGGTTATTAGTGGTGCTGTATTTGCTCTTGCACATCTCACTCCTGGACAATTTCCTCAGTTGTTTGTTCTTG : GGACTGCTCTGGGTTTTTCTTATGCTCAAACGCGAAACCTCCTAACCCCAATCACAATTCATGCTTTATGGAACTCTGGTGTTATTTTGCTTCTTACCTTCCTTCAG : CTCCAAGGATATGATATCAGGGAAATAATACAAGGAACTTGACTTGGGCACCATAATTCTCTGGACAAAGTCGTCTTCATCAGCTTGTCGCAGTTGCTGAACGTAGGAACGAATCTGGTTTTATTTTCTGTAATTTAGGCCAAATGCTGGTTGGAGCTTGCAAGTAATGTGGGAAGCCGAAAA</gDNA_template>
            <first_frame> G  I  G  K  L  F  H  F  L  H  L  H  V  D  *   : G  L  I  E  A  A  S  I  P  Y  V  G  L  D  V  E  A  L  S  L  D  E  K  A  E  I  L  F  A  D  Q  A :   I  T  T  A  V  V  L  I  V  L  Y  A  L  T  K  S  S  Q  P  L  P  D  D  I  Y  R  Y   : D  L  K  E  P  F  N  L  Q  R  G  W  L  L  W  A  G  I  G  L  G  G  A  I  G  A  I  A  L  T  G  V  A  M  S  A  F  N  G  E  P  P  Q  R  E  :  T  D  A  L  A  R  L  L  P  L  I  G  S  S  S  I  S :   T  A  S  L  L  G  I  T  G  V  L  A  P  I  L  E  E  T  V  F  R  G  F  F  M  V  S  L  T  K  W :   V  P  T  P  L  A  A  V  I  S  G  A  V  F  A  L  A  H  L  T  P  G  Q  F  P  Q  L  F  V  L   : G  T  A  L  G  F  S  Y  A  Q  T  R  N  L  L  T  P  I  T  I  H  A  L  W  N  S  G  V  I  L  L  L  T  F  L  Q  :  L  Q  G  Y  D  I  R  E  I  I  Q  G  T  *  L  G  H  H  N  S  L  D  K  V  V  F  I  S  L  S  Q  L  L  N  V  G  T  N  L  V  L  F  S  V  I  *  A  K  C  W  L  E  L  A  S  N  V  G  S  R  K </first_frame>
            <second_frame>  E  L  A  N  C  F  T  F  F  T  C  M  W  I  K  :  D  *  S  R  Q  R  Q  Y  P  M  *  D  L  M  *  K  H  *  A  W  T  R  R  L  K  F  C  S  L  I  K   : L  *  Q  L  Q  L  C  *  *  S  F  M  L  S  P  S  H  L  N  H  F  L  M  T  Y  I  V  M  :  I  *  R  N  L  S  I  S  R  E  D  G  F  C  G  L  E  L  V  *  G  E  Q  *  V  Q  L  L  *  Q  E  *  Q  C  L  L  S  M  V  S  R  H  K  E  R :   L  M  R  L  L  G  Y  S  H  *  *  A  P  Q  V  S   : A  L  L  L  C  W  A  L  P  V  Y  L  L  Q  F  S  R  R  L  C  L  E  D  F  L  W  S  L  *  L  S   : G  Y  L  H  R  L  Q  R  L  L  V  V  L  Y  L  L  L  H  I  S  L  L  D  N  F  L  S  C  L  F  L  :  G  L  L  W  V  F  L  M  L  K  R  E  T  S  *  P  Q  S  Q  F  M  L  Y  G  T  L  V  L  F  C  F  L  P  S  F  S :   S  K  D  M  I  S  G  K  *  Y  K  E  L  D  L  G  T  I  I  L  W  T  K  S  S  S  S  A  C  R  S  C  *  T  *  E  R  I  W  F  Y  F  L  *  F  R  P  N  A  G  W  S  L  Q  V  M  W  E  A  E   </second_frame>
            <third_frame>   N  W  Q  T  V  S  L  S  S  L  A  C  G  L  R :   T  N  R  G  S  V  N  T  L  C  R  T  *  C  R  S  I  E  L  G  R  E  G  *  N  F  V  R  *  S  S  :  Y  N  N  C  S  C  A  N  S  P  L  C  S  H  Q  V  I  S  T  T  S  *  *  H  I  S  L  * :   S  E  G  T  F  Q  S  P  E  R  M  A  F  V  G  W  N  W  S  R  G  S  N  R  C  N  C  F  N  R  S  S  N  V  C  F  Q  W  *  A  A  T  K  R   : D  *  C  A  C  S  V  T  P  I  D  R  L  L  K  Y  Q  :  H  C  F  S  A  G  H  Y  R  C  T  C  S  N  S  R  G  D  C  V  *  R  I  F  Y  G  L  S  D  *  V  :  G  T  Y  T  A  C  S  G  Y  *  W  C  C  I  C  S  C  T  S  H  S  W  T  I  S  S  V  V  C  S  W :   D  C  S  G  F  F  L  C  S  N  A  K  P  P  N  P  N  H  N  S  C  F  M  E  L  W  C  Y  F  A  S  Y  L  P  S   : A  P  R  I  *  Y  Q  G  N  N  T  R  N  L  T  W  A  P  *  F  S  G  Q  S  R  L  H  Q  L  V  A  V  A  E  R  R  N  E  S  G  F  I  F  C  N  L  G  Q  M  L  V  G  A  C  K  *  C  G  K  P  K  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="108384" stop="107846"/>
                    <exon start="107764" stop="107682"/>
                    <exon start="107552" stop="107419"/>
                    <exon start="107275" stop="107226"/>
                    <exon start="107077" stop="106985"/>
                    <exon start="106169" stop="106078"/>
                    <exon start="105688" stop="105582"/>
                    <exon start="105471" stop="105430"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>693</number_coding_nucleotides>
                  <number_encoded_amino_acids>231</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>GLIEAASIPYVGLDVEALSLDEKAEILFADQAITTAVVLIVLYALTKSSQPLPDDIYRYDLKEPFNLQRGWLLWAGIGLGGAIGAIALTGVAMSAFNGEPPQRETDALARLLPLIGSSSISTASLLGITGVLAPILEETVFRGFFMVSLTKWVPTPLAAVISGAVFALAHLTPGQFPQLFVLGTALGFSYAQTRNLLTPITIHALWNSGVILLLTFLQLQGYDIREIIQGT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="114117" PGL_stop="120085"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="114117" e_stop="114142"/>
            <exon e_start="115094" e_stop="115745"/>
            <exon e_start="115862" e_stop="116072"/>
            <exon e_start="116217" e_stop="116511"/>
            <exon e_start="117656" e_stop="118030"/>
            <exon e_start="118851" e_stop="118928"/>
            <exon e_start="119467" e_stop="120085"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.669" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.962" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.949" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.960" acc_prob="0.966" e_score="0.997"/>
          <exon-intron don_prob="0.998" acc_prob="0.974" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="114117" e_stop="114142" e_length="26"/>
          </exon>
          <intron i_serial="1" don_prob="0.669" acc_prob="0.993">
            <gDNA_intron_boundary i_start="114143" i_stop="115093" i_length="951"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="115094" e_stop="115745" e_length="652"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.962">
            <gDNA_intron_boundary i_start="115746" i_stop="115861" i_length="116"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="115862" e_stop="116072" e_length="211"/>
          </exon>
          <intron i_serial="3" don_prob="0.991" acc_prob="0.994">
            <gDNA_intron_boundary i_start="116073" i_stop="116216" i_length="144"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="116217" e_stop="116511" e_length="295"/>
          </exon>
          <intron i_serial="4" don_prob="0.949" acc_prob="0.994">
            <gDNA_intron_boundary i_start="116512" i_stop="117655" i_length="1144"/>
          </intron>
          <exon e_serial="5" e_score="0.997">
            <gDNA_exon_boundary e_start="117656" e_stop="118030" e_length="375"/>
          </exon>
          <intron i_serial="5" don_prob="0.960" acc_prob="0.966">
            <gDNA_intron_boundary i_start="118031" i_stop="118850" i_length="820"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="118851" e_stop="118928" e_length="78"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.974">
            <gDNA_intron_boundary i_start="118929" i_stop="119466" i_length="538"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="119467" e_stop="120085" e_length="619"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="114117" stop="114142"/>
              <exon start="115094" stop="115745"/>
              <exon start="115862" stop="116072"/>
              <exon start="116217" stop="116511"/>
              <exon start="117656" stop="118030"/>
              <exon start="118851" stop="118928"/>
              <exon start="119467" stop="120085"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316169" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTGTTGGAATATTTTCATGCCATTG : GGCTGCAATGGCGGGCAAAAACTCAGGGGATAATAGGACTAGGACTTCTGTATCAATATTTATAATAGCTGGTCTATGCTGCTTCTTCTATTTACTTGGAGCATGGCAAAGAAGTGGTTTTGGGAAAGGAGATAGTATAGCAGTGGCTGTCACCAAGACTGCTGGTGAGAATTGCGATGTACTACCAAATCTCAATTTTGAAACTCGTCATGCTGGCGAAGCAGGTGGTACTGATGAGTCGGAAGAAGTCGAGGAACTTAAGCCATGTGATCCTCAGTACACTGATTATACACCATGTCAAGATCAAAAGCGTGCTATGACTTTCCCAAGGGAAAATATGAACTACCGAGAAAGGCATTGTCCACCTCAAGAAGAGAAGTTACATTGCCTTATTCCAGCACCTAAGGGATATGTTACCCCATTTCCGTGGCCAAAAAGTCGGGATTATGTTCCCTATGCCAATGCTCCATATAAGAGCTTGACTGTTGAGAAAGCTATTCAGAATTGGGTTCAATATGAGGGTAATGTGTTTAGGTTCCCAGGAGGAGGGACACAATTCCCTCAAGGAGCAGATAAGTATATTGATCAGCTTGCTTCAGTCGTCCCAATCGAGAATGGGACAGTTCGGACTGCTTTGGACACTGGTTGTGGG : GTTGCAAGTTGGGGTGCTTATCTTTGGAAAAGGAATGTCATAGCAATGTCATTTGCCCCAAGAGACTCACATGAAGCTCAGGTTCAGTTTGCTCTGGAAAGGGGTGTGCCTGCTGTTATTGGTGTACTAGGAACAATCAAAATGCCATATCCATCTAAAGCCTTTGATATGGCCCATTGTTCTCGTTGTCTAATCCCATGGGGAGCTGCTG : ATGGAATCCTCATGATGGAAGTTGACCGAGTTCTTAGACCTGGAGGCTACTGGGTGCTTTCTGGACCTCCTATCAACTGGAAGGTCAATTTTAAGGCCTGGCAACGCCCCAAGGAGGATCTTGAGGAAGAACAAAGGAAGATTGAAGAGGCTGCTAAACTTCTTTGCTGGGAGAAGATATCTGAGAAGGGAGAGACTGCTATTTGGCAGAAAAGAAAGGATAGTGCCTCATGCCGTTCTGCACAAGAAAATTCTGCAGCCAAAGTTTGTAAACCTTCTGATCCAGATAGTGTCTG : GTACAACAAAATGGAAATGTGCATAACACCAAACAATGGTAATGGTGGAGACGAGAGTCTAAAGCCATTCCCTGAGAGACTTTATGCTGTTCCTCCAAGAATTGCCAATGGATTAGTTTCTGGAGTGTCTGTTGAGAAATATCAAGAAGACAGCAAGAAATGGAAGAAACACGTAAGTGCTTATAAGAAGATCAACAAACTCCTGGACACTGGAAGGTACCGCAACATTATGGACATGAATGCTGGACTAGGAGGTTTTGCAGCAGCACTTCACGATCCCAAGTTTTGGGTTATGAATGTTATGCCAACAATAGCTGAGAAGAATACTTTGGGAGTTGTATTCGAACGGGGACTGATTGGTATCTATCATGACTG : GTGTGAAGCATTTTCTACATACCCAAGGACATATGATCTCATTCATGCTAATGGCCTTTTCAGTTTATATAAGGACAA : GTGTGACTTTCAAGACATTCTCTTAGAGATGGACCGTATTTTGCGTCCAGAAGGAGCTGTCATTCTAAGAGACAATGTAGATGTACTGATCAAGGTGAAGAAGATAATAGGAGGCATGAGGTGGAACTTCAAATTGATGGATCATGAGGACGGTCCCCTTGTTCCCGAAAAAATACTGGTTGCTGTCAAACAATATTGGACTCTGGGTGATACCAACTCCACATCCTCACAATGAGATGCCACCGAAGATGTTGTCTGACCATATGAACTCGTATGGATCAGGAAGACCAACATCTTATGAATACAAAATCCATGGTTATGCAAGACGTTTCACCCCTAGGAATTTTGATCGAGCAGGGTCCCTTGACAGGTGACTCCACGGCACATCTTTAGTCTTGATGGATCCATAAATTATACCAGATGATTTAGCGTTTATAACTGTCTTCATTTTCTTCTCTGTTCCATGTCTCGTTAGATAATGACTCTAAAAACTGAGCTACATGGGATTATTATGAAGCTTTTTGAAAGTCCTTTATAAACATTTCTTCCCTCGATATATAGACTCTGTAATGTGTTGTTTAATTAAAGTGGAAATTTGATCTAGTTGATTTCTGATATG</gDNA_template>
            <first_frame> I  V  G  I  F  S  C  H  W :   A  A  M  A  G  K  N  S  G  D  N  R  T  R  T  S  V  S  I  F  I  I  A  G  L  C  C  F  F  Y  L  L  G  A  W  Q  R  S  G  F  G  K  G  D  S  I  A  V  A  V  T  K  T  A  G  E  N  C  D  V  L  P  N  L  N  F  E  T  R  H  A  G  E  A  G  G  T  D  E  S  E  E  V  E  E  L  K  P  C  D  P  Q  Y  T  D  Y  T  P  C  Q  D  Q  K  R  A  M  T  F  P  R  E  N  M  N  Y  R  E  R  H  C  P  P  Q  E  E  K  L  H  C  L  I  P  A  P  K  G  Y  V  T  P  F  P  W  P  K  S  R  D  Y  V  P  Y  A  N  A  P  Y  K  S  L  T  V  E  K  A  I  Q  N  W  V  Q  Y  E  G  N  V  F  R  F  P  G  G  G  T  Q  F  P  Q  G  A  D  K  Y  I  D  Q  L  A  S  V  V  P  I  E  N  G  T  V  R  T  A  L  D  T  G  C  G  :  V  A  S  W  G  A  Y  L  W  K  R  N  V  I  A  M  S  F  A  P  R  D  S  H  E  A  Q  V  Q  F  A  L  E  R  G  V  P  A  V  I  G  V  L  G  T  I  K  M  P  Y  P  S  K  A  F  D  M  A  H  C  S  R  C  L  I  P  W  G  A  A   : D  G  I  L  M  M  E  V  D  R  V  L  R  P  G  G  Y  W  V  L  S  G  P  P  I  N  W  K  V  N  F  K  A  W  Q  R  P  K  E  D  L  E  E  E  Q  R  K  I  E  E  A  A  K  L  L  C  W  E  K  I  S  E  K  G  E  T  A  I  W  Q  K  R  K  D  S  A  S  C  R  S  A  Q  E  N  S  A  A  K  V  C  K  P  S  D  P  D  S  V  W :   Y  N  K  M  E  M  C  I  T  P  N  N  G  N  G  G  D  E  S  L  K  P  F  P  E  R  L  Y  A  V  P  P  R  I  A  N  G  L  V  S  G  V  S  V  E  K  Y  Q  E  D  S  K  K  W  K  K  H  V  S  A  Y  K  K  I  N  K  L  L  D  T  G  R  Y  R  N  I  M  D  M  N  A  G  L  G  G  F  A  A  A  L  H  D  P  K  F  W  V  M  N  V  M  P  T  I  A  E  K  N  T  L  G  V  V  F  E  R  G  L  I  G  I  Y  H  D  W :   C  E  A  F  S  T  Y  P  R  T  Y  D  L  I  H  A  N  G  L  F  S  L  Y  K  D  K :   C  D  F  Q  D  I  L  L  E  M  D  R  I  L  R  P  E  G  A  V  I  L  R  D  N  V  D  V  L  I  K  V  K  K  I  I  G  G  M  R  W  N  F  K  L  M  D  H  E  D  G  P  L  V  P  E  K  I  L  V  A  V  K  Q  Y  W  T  L  G  D  T  N  S  T  S  S  Q  *  D  A  T  E  D  V  V  *  P  Y  E  L  V  W  I  R  K  T  N  I  L  *  I  Q  N  P  W  L  C  K  T  F  H  P  *  E  F  *  S  S  R  V  P  *  Q  V  T  P  R  H  I  F  S  L  D  G  S  I  N  Y  T  R  *  F  S  V  Y  N  C  L  H  F  L  L  C  S  M  S  R  *  I  M  T  L  K  T  E  L  H  G  I  I  M  K  L  F  E  S  P  L  *  T  F  L  P  S  I  Y  R  L  C  N  V  L  F  N  *  S  G  N  L  I  *  L  I  S  D  M </first_frame>
            <second_frame>  L  L  E  Y  F  H  A  I   : G  L  Q  W  R  A  K  T  Q  G  I  I  G  L  G  L  L  Y  Q  Y  L  *  *  L  V  Y  A  A  S  S  I  Y  L  E  H  G  K  E  V  V  L  G  K  E  I  V  *  Q  W  L  S  P  R  L  L  V  R  I  A  M  Y  Y  Q  I  S  I  L  K  L  V  M  L  A  K  Q  V  V  L  M  S  R  K  K  S  R  N  L  S  H  V  I  L  S  T  L  I  I  H  H  V  K  I  K  S  V  L  *  L  S  Q  G  K  I  *  T  T  E  K  G  I  V  H  L  K  K  R  S  Y  I  A  L  F  Q  H  L  R  D  M  L  P  H  F  R  G  Q  K  V  G  I  M  F  P  M  P  M  L  H  I  R  A  *  L  L  R  K  L  F  R  I  G  F  N  M  R  V  M  C  L  G  S  Q  E  E  G  H  N  S  L  K  E  Q  I  S  I  L  I  S  L  L  Q  S  S  Q  S  R  M  G  Q  F  G  L  L  W  T  L  V  V  G :   L  Q  V  G  V  L  I  F  G  K  G  M  S  *  Q  C  H  L  P  Q  E  T  H  M  K  L  R  F  S  L  L  W  K  G  V  C  L  L  L  L  V  Y  *  E  Q  S  K  C  H  I  H  L  K  P  L  I  W  P  I  V  L  V  V  *  S  H  G  E  L  L  :  M  E  S  S  *  W  K  L  T  E  F  L  D  L  E  A  T  G  C  F  L  D  L  L  S  T  G  R  S  I  L  R  P  G  N  A  P  R  R  I  L  R  K  N  K  G  R  L  K  R  L  L  N  F  F  A  G  R  R  Y  L  R  R  E  R  L  L  F  G  R  K  E  R  I  V  P  H  A  V  L  H  K  K  I  L  Q  P  K  F  V  N  L  L  I  Q  I  V  S   : G  T  T  K  W  K  C  A  *  H  Q  T  M  V  M  V  E  T  R  V  *  S  H  S  L  R  D  F  M  L  F  L  Q  E  L  P  M  D  *  F  L  E  C  L  L  R  N  I  K  K  T  A  R  N  G  R  N  T  *  V  L  I  R  R  S  T  N  S  W  T  L  E  G  T  A  T  L  W  T  *  M  L  D  *  E  V  L  Q  Q  H  F  T  I  P  S  F  G  L  *  M  L  C  Q  Q  *  L  R  R  I  L  W  E  L  Y  S  N  G  D  *  L  V  S  I  M  T   : G  V  K  H  F  L  H  T  Q  G  H  M  I  S  F  M  L  M  A  F  S  V  Y  I  R  T   : S  V  T  F  K  T  F  S  *  R  W  T  V  F  C  V  Q  K  E  L  S  F  *  E  T  M  *  M  Y  *  S  R  *  R  R  *  *  E  A  *  G  G  T  S  N  *  W  I  M  R  T  V  P  L  F  P  K  K  Y  W  L  L  S  N  N  I  G  L  W  V  I  P  T  P  H  P  H  N  E  M  P  P  K  M  L  S  D  H  M  N  S  Y  G  S  G  R  P  T  S  Y  E  Y  K  I  H  G  Y  A  R  R  F  T  P  R  N  F  D  R  A  G  S  L  D  R  *  L  H  G  T  S  L  V  L  M  D  P  *  I  I  P  D  D  L  A  F  I  T  V  F  I  F  F  S  V  P  C  L  V  R  *  *  L  *  K  L  S  Y  M  G  L  L  *  S  F  L  K  V  L  Y  K  H  F  F  P  R  Y  I  D  S  V  M  C  C  L  I  K  V  E  I  *  S  S  *  F  L  I   </second_frame>
            <third_frame>   C  W  N  I  F  M  P  L  :  G  C  N  G  G  Q  K  L  R  G  *  *  D  *  D  F  C  I  N  I  Y  N  S  W  S  M  L  L  L  L  F  T  W  S  M  A  K  K  W  F  W  E  R  R  *  Y  S  S  G  C  H  Q  D  C  W  *  E  L  R  C  T  T  K  S  Q  F  *  N  S  S  C  W  R  S  R  W  Y  *  *  V  G  R  S  R  G  T  *  A  M  *  S  S  V  H  *  L  Y  T  M  S  R  S  K  A  C  Y  D  F  P  K  G  K  Y  E  L  P  R  K  A  L  S  T  S  R  R  E  V  T  L  P  Y  S  S  T  *  G  I  C  Y  P  I  S  V  A  K  K  S  G  L  C  S  L  C  Q  C  S  I  *  E  L  D  C  *  E  S  Y  S  E  L  G  S  I  *  G  *  C  V  *  V  P  R  R  R  D  T  I  P  S  R  S  R  *  V  Y  *  S  A  C  F  S  R  P  N  R  E  W  D  S  S  D  C  F  G  H  W  L  W   : G  C  K  L  G  C  L  S  L  E  K  E  C  H  S  N  V  I  C  P  K  R  L  T  *  S  S  G  S  V  C  S  G  K  G  C  A  C  C  Y  W  C  T  R  N  N  Q  N  A  I  S  I  *  S  L  *  Y  G  P  L  F  S  L  S  N  P  M  G  S  C  * :   W  N  P  H  D  G  S  *  P  S  S  *  T  W  R  L  L  G  A  F  W  T  S  Y  Q  L  E  G  Q  F  *  G  L  A  T  P  Q  G  G  S  *  G  R  T  K  E  D  *  R  G  C  *  T  S  L  L  G  E  D  I  *  E  G  R  D  C  Y  L  A  E  K  K  G  *  C  L  M  P  F  C  T  R  K  F  C  S  Q  S  L  *  T  F  *  S  R  *  C  L  :  V  Q  Q  N  G  N  V  H  N  T  K  Q  W  *  W  W  R  R  E  S  K  A  I  P  *  E  T  L  C  C  S  S  K  N  C  Q  W  I  S  F  W  S  V  C  *  E  I  S  R  R  Q  Q  E  M  E  E  T  R  K  C  L  *  E  D  Q  Q  T  P  G  H  W  K  V  P  Q  H  Y  G  H  E  C  W  T  R  R  F  C  S  S  T  S  R  S  Q  V  L  G  Y  E  C  Y  A  N  N  S  *  E  E  Y  F  G  S  C  I  R  T  G  T  D  W  Y  L  S  *  L  :  V  *  S  I  F  Y  I  P  K  D  I  *  S  H  S  C  *  W  P  F  Q  F  I  *  G  Q  :  V  *  L  S  R  H  S  L  R  D  G  P  Y  F  A  S  R  R  S  C  H  S  K  R  Q  C  R  C  T  D  Q  G  E  E  D  N  R  R  H  E  V  E  L  Q  I  D  G  S  *  G  R  S  P  C  S  R  K  N  T  G  C  C  Q  T  I  L  D  S  G  *  Y  Q  L  H  I  L  T  M  R  C  H  R  R  C  C  L  T  I  *  T  R  M  D  Q  E  D  Q  H  L  M  N  T  K  S  M  V  M  Q  D  V  S  P  L  G  I  L  I  E  Q  G  P  L  T  G  D  S  T  A  H  L  *  S  *  W  I  H  K  L  Y  Q  M  I  *  R  L  *  L  S  S  F  S  S  L  F  H  V  S  L  D  N  D  S  K  N  *  A  T  W  D  Y  Y  E  A  F  *  K  S  F  I  N  I  S  S  L  D  I  *  T  L  *  C  V  V  *  L  K  W  K  F  D  L  V  D  F  *  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="114117" stop="114142"/>
                    <exon start="115094" stop="115745"/>
                    <exon start="115862" stop="116072"/>
                    <exon start="116217" stop="116511"/>
                    <exon start="117656" stop="118030"/>
                    <exon start="118851" stop="118928"/>
                    <exon start="119467" stop="119701"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>1869</number_coding_nucleotides>
                  <number_encoded_amino_acids>623</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IVGIFSCHWAAMAGKNSGDNRTRTSVSIFIIAGLCCFFYLLGAWQRSGFGKGDSIAVAVTKTAGENCDVLPNLNFETRHAGEAGGTDESEEVEELKPCDPQYTDYTPCQDQKRAMTFPRENMNYRERHCPPQEEKLHCLIPAPKGYVTPFPWPKSRDYVPYANAPYKSLTVEKAIQNWVQYEGNVFRFPGGGTQFPQGADKYIDQLASVVPIENGTVRTALDTGCGVASWGAYLWKRNVIAMSFAPRDSHEAQVQFALERGVPAVIGVLGTIKMPYPSKAFDMAHCSRCLIPWGAADGILMMEVDRVLRPGGYWVLSGPPINWKVNFKAWQRPKEDLEEEQRKIEEAAKLLCWEKISEKGETAIWQKRKDSASCRSAQENSAAKVCKPSDPDSVWYNKMEMCITPNNGNGGDESLKPFPERLYAVPPRIANGLVSGVSVEKYQEDSKKWKKHVSAYKKINKLLDTGRYRNIMDMNAGLGGFAAALHDPKFWVMNVMPTIAEKNTLGVVFERGLIGIYHDWCEAFSTYPRTYDLIHANGLFSLYKDKCDFQDILLEMDRILRPEGAVILRDNVDVLIKVKKIIGGMRWNFKLMDHEDGPLVPEKILVAVKQYWTLGDTNSTSSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="119012" e_stop="119744"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="119012" e_stop="119744" e_length="733"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="119012" stop="119744"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316170" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGTATTGCAGCTCCTTTATTGAAGGTCCTATTGTTGGCCGTGCCTAGTTGCTAATTAAGTAAAAAGGTCTAAATAATTGTGATATGATAAGAGCAAAGGTAGCTTAAGTAAATATACACTGATAGTAGATGATCATACACTTAAAATTTTAGGATAGTAACCTTCTCAGTATATGGTATAATGACTGATATTTGAAGTACCGACAGAAGTTTGCGTGTGTTGTGGCTAAATCCACCATCATTTCTCCTTTTTGCTGCTGTGACTTAATATGCTGTTATTCGTAACTGCACTGTTCTTGTTGAAATAGAAATGCCAGCTCGTCACTCTGGCAACTCATATCTCCCCCGTCTACTGATCCCCAGCCAGGAAAAGAAAAAAATACCCAGTTAAAGGGTGCTACAGGAAGAAAAATAATTGGTATCATTGACTAAATTAGCATTTTCTAATTTTATAGGTGTGACTTTCAAGACATTCTCTTAGAGATGGACCGTATTTTGCGTCCAGAAGGAGCTGTCATTCTAAGAGACAATGTAGATGTACTGATCAAGGTGAAGAAGATAATAGGAGGCATGAGGTGGAACTTCAAATTGATGGATCATGAGGACGGTCCCCTTGTTCCCGAAAAAATACTGGTTGCTGTCAAACAATATTGGACTCTGGGTGATACCAACTCCACATCCTCACAATGAGATGCCACCGAAGATGTTGTCTGACCATATGAACTCGTATGGA</gDNA_template>
            <first_frame> W  Y  C  S  S  F  I  E  G  P  I  V  G  R  A  *  L  L  I  K  *  K  G  L  N  N  C  D  M  I  R  A  K  V  A  *  V  N  I  H  *  *  *  M  I  I  H  L  K  F  *  D  S  N  L  L  S  I  W  Y  N  D  *  Y  L  K  Y  R  Q  K  F  A  C  V  V  A  K  S  T  I  I  S  P  F  C  C  C  D  L  I  C  C  Y  S  *  L  H  C  S  C  *  N  R  N  A  S  S  S  L  W  Q  L  I  S  P  P  S  T  D  P  Q  P  G  K  E  K  N  T  Q  L  K  G  A  T  G  R  K  I  I  G  I  I  D  *  I  S  I  F  *  F  Y  R  C  D  F  Q  D  I  L  L  E  M  D  R  I  L  R  P  E  G  A  V  I  L  R  D  N  V  D  V  L  I  K  V  K  K  I  I  G  G  M  R  W  N  F  K  L  M  D  H  E  D  G  P  L  V  P  E  K  I  L  V  A  V  K  Q  Y  W  T  L  G  D  T  N  S  T  S  S  Q  *  D  A  T  E  D  V  V  *  P  Y  E  L  V  W  </first_frame>
            <second_frame>  G  I  A  A  P  L  L  K  V  L  L  L  A  V  P  S  C  *  L  S  K  K  V  *  I  I  V  I  *  *  E  Q  R  *  L  K  *  I  Y  T  D  S  R  *  S  Y  T  *  N  F  R  I  V  T  F  S  V  Y  G  I  M  T  D  I  *  S  T  D  R  S  L  R  V  L  W  L  N  P  P  S  F  L  L  F  A  A  V  T  *  Y  A  V  I  R  N  C  T  V  L  V  E  I  E  M  P  A  R  H  S  G  N  S  Y  L  P  R  L  L  I  P  S  Q  E  K  K  K  I  P  S  *  R  V  L  Q  E  E  K  *  L  V  S  L  T  K  L  A  F  S  N  F  I  G  V  T  F  K  T  F  S  *  R  W  T  V  F  C  V  Q  K  E  L  S  F  *  E  T  M  *  M  Y  *  S  R  *  R  R  *  *  E  A  *  G  G  T  S  N  *  W  I  M  R  T  V  P  L  F  P  K  K  Y  W  L  L  S  N  N  I  G  L  W  V  I  P  T  P  H  P  H  N  E  M  P  P  K  M  L  S  D  H  M  N  S  Y  G </second_frame>
            <third_frame>   V  L  Q  L  L  Y  *  R  S  Y  C  W  P  C  L  V  A  N  *  V  K  R  S  K  *  L  *  Y  D  K  S  K  G  S  L  S  K  Y  T  L  I  V  D  D  H  T  L  K  I  L  G  *  *  P  S  Q  Y  M  V  *  *  L  I  F  E  V  P  T  E  V  C  V  C  C  G  *  I  H  H  H  F  S  F  L  L  L  *  L  N  M  L  L  F  V  T  A  L  F  L  L  K  *  K  C  Q  L  V  T  L  A  T  H  I  S  P  V  Y  *  S  P  A  R  K  R  K  K  Y  P  V  K  G  C  Y  R  K  K  N  N  W  Y  H  *  L  N  *  H  F  L  I  L  *  V  *  L  S  R  H  S  L  R  D  G  P  Y  F  A  S  R  R  S  C  H  S  K  R  Q  C  R  C  T  D  Q  G  E  E  D  N  R  R  H  E  V  E  L  Q  I  D  G  S  *  G  R  S  P  C  S  R  K  N  T  G  C  C  Q  T  I  L  D  S  G  *  Y  Q  L  H  I  L  T  M  R  C  H  R  R  C  C  L  T  I  *  T  R  M   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="119459" stop="119701"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>240</number_coding_nucleotides>
                  <number_encoded_amino_acids>80</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYRCDFQDILLEMDRILRPEGAVILRDNVDVLIKVKKIIGGMRWNFKLMDHEDGPLVPEKILVAVKQYWTLGDTNSTSSQ*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="+" PGL_start="122442" PGL_stop="122808"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="122442" e_stop="122808"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="122442" e_stop="122808" e_length="367"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="122442" stop="122808"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U346986" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACAATAGGAGCTAATCATCAAGATTTGCACTTCAAGAGAATTGATGATTCAGGAGTAGTTGGATTGAAATCAGATGAGCGTTTCGTCGTTCCTGTTTATGATCCTAAAGGTGGGAATGGGATACAAATGATCAAAAAGGAAACAGAAGAAGAGGAATCAAGAAAGTCACTAGAAGTGTTTGGCTTTTCAATAACAGAGAAAGAAAGAAGCAAAATGAGTCTTGAGAAGAACATAGGCATGTTAACATGGGATGCAATTGTTCCGAAAGCTGAAGAAATCGACATTATCAACATAGGTGCAAGTTCAAATGGAACCTATGAAGAAGATTACGCAGAAAGTGATGCAAGTTCAGACTTGTTTGAAATCG</gDNA_template>
            <first_frame> T  I  G  A  N  H  Q  D  L  H  F  K  R  I  D  D  S  G  V  V  G  L  K  S  D  E  R  F  V  V  P  V  Y  D  P  K  G  G  N  G  I  Q  M  I  K  K  E  T  E  E  E  E  S  R  K  S  L  E  V  F  G  F  S  I  T  E  K  E  R  S  K  M  S  L  E  K  N  I  G  M  L  T  W  D  A  I  V  P  K  A  E  E  I  D  I  I  N  I  G  A  S  S  N  G  T  Y  E  E  D  Y  A  E  S  D  A  S  S  D  L  F  E  I  </first_frame>
            <second_frame>  Q  *  E  L  I  I  K  I  C  T  S  R  E  L  M  I  Q  E  *  L  D  *  N  Q  M  S  V  S  S  F  L  F  M  I  L  K  V  G  M  G  Y  K  *  S  K  R  K  Q  K  K  R  N  Q  E  S  H  *  K  C  L  A  F  Q  *  Q  R  K  K  E  A  K  *  V  L  R  R  T  *  A  C  *  H  G  M  Q  L  F  R  K  L  K  K  S  T  L  S  T  *  V  Q  V  Q  M  E  P  M  K  K  I  T  Q  K  V  M  Q  V  Q  T  C  L  K  S </second_frame>
            <third_frame>   N  R  S  *  S  S  R  F  A  L  Q  E  N  *  *  F  R  S  S  W  I  E  I  R  *  A  F  R  R  S  C  L  *  S  *  R  W  E  W  D  T  N  D  Q  K  G  N  R  R  R  G  I  K  K  V  T  R  S  V  W  L  F  N  N  R  E  R  K  K  Q  N  E  S  *  E  E  H  R  H  V  N  M  G  C  N  C  S  E  S  *  R  N  R  H  Y  Q  H  R  C  K  F  K  W  N  L  *  R  R  L  R  R  K  *  C  K  F  R  L  V  *  N   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="+"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="122442" stop="122807"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>366</number_coding_nucleotides>
                  <number_encoded_amino_acids>122</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TIGANHQDLHFKRIDDSGVVGLKSDERFVVPVYDPKGGNGIQMIKKETEEEESRKSLEVFGFSITEKERSKMSLEKNIGMLTWDAIVPKAEEIDIINIGASSNGTYEEDYAESDASSDLFEI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="128245" PGL_stop="127278"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="128245" e_stop="127278"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.977">
            <gDNA_exon_boundary e_start="128245" e_stop="127278" e_length="968"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="128245" stop="127278"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U320734" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>CATGATTGCTGCTATGGCTAATTACTTGAAGTATGACGTCTATGATCTTGAGCTGACATCGGTTAAGGACAATACCGAGCTAAGAAAACTCCTGATAGATACAACAGGTAAATCTATTATTGTGATTGAAGACATAGATTGTTCCCTTGACCTAACAGGTCAACGAGAGACGAATAAGAAGAAGAAAGAAGAGGAAGATAAAGGAAAAACTGAGGAAGATGCCGTCAAGGAGAAGATGAAAAAAGGCGGAGAGACGAAAGAAAAGCAAAGTGAGGTAACTTTATCAGGACTATTGAACTTCATTGATGGTCTATGGTCAGCTATTGGCGGTGAAAGGCTAATCGTCTTCACTACAAACTACGTGGAGAAGCTTGATCCTGCTCTAATCCGGAGGGGGAGAATGGATAAACATATTGTCCTATCATACTGTTGCTTTGAGTCATTCAAAGTTCTTGCACATAACTATCTTGACGTCGTTGAATCTCATGTTCACTTTCCTCAGATTCGTCGTTTATTAGAGGAAACTAATATGACTCCTGCTGATATTGCTGAGAATTTGATGCCTAAGTCTTCAAAGGAAAATGCAGATATTTGTTTAGAGAGATTGATTAAAGCTCTCGAAACTGCAAAAGAGGAAGCGAAACTTAAGGCTGAGGAAGAAGAGAGAGCAAAGGCGGCTGAGAAGGAGAAAGAAGAGAAAGATCGCGAGGAAAAGAAAGAAGTAACAGCTACTGAAGAAGCTAAGAGTGTTGACAGTGTAAACGAAAAAGATAATGGTGTTAAGGAAAATGGTAATGTTAGCAAAAGTTGATGAATACACATATAAGAAAGTATGTTTGGAGGTGTTTTAGCTTTCTGTTTTCTACAATTAGCTGAACTTGTAATAAGTTGTTGGTGAAGGTTAATAAGAAAACTTTTTTTAATCATGAAACACTCAAATTTTAGCATCACAATCCATATTTTGCCTC</gDNA_template>
            <first_frame> H  D  C  C  Y  G  *  L  L  E  V  *  R  L  *  S  *  A  D  I  G  *  G  Q  Y  R  A  K  K  T  P  D  R  Y  N  R  *  I  Y  Y  C  D  *  R  H  R  L  F  P  *  P  N  R  S  T  R  D  E  *  E  E  E  R  R  G  R  *  R  K  N  *  G  R  C  R  Q  G  E  D  E  K  R  R  R  D  E  R  K  A  K  *  G  N  F  I  R  T  I  E  L  H  *  W  S  M  V  S  Y  W  R  *  K  A  N  R  L  H  Y  K  L  R  G  E  A  *  S  C  S  N  P  E  G  E  N  G  *  T  Y  C  P  I  I  L  L  L  *  V  I  Q  S  S  C  T  *  L  S  *  R  R  *  I  S  C  S  L  S  S  D  S  S  F  I  R  G  N  *  Y  D  S  C  *  Y  C  *  E  F  D  A  *  V  F  K  G  K  C  R  Y  L  F  R  E  I  D  *  S  S  R  N  C  K  R  G  S  E  T  *  G  *  G  R  R  E  S  K  G  G  *  E  G  E  R  R  E  R  S  R  G  K  E  R  S  N  S  Y  *  R  S  *  E  C  *  Q  C  K  R  K  R  *  W  C  *  G  K  W  *  C  *  Q  K  L  M  N  T  H  I  R  K  Y  V  W  R  C  F  S  F  L  F  S  T  I  S  *  T  C  N  K  L  L  V  K  V  N  K  K  T  F  F  N  H  E  T  L  K  F  *  H  H  N  P  Y  F  A   </first_frame>
            <second_frame>  M  I  A  A  M  A  N  Y  L  K  Y  D  V  Y  D  L  E  L  T  S  V  K  D  N  T  E  L  R  K  L  L  I  D  T  T  G  K  S  I  I  V  I  E  D  I  D  C  S  L  D  L  T  G  Q  R  E  T  N  K  K  K  K  E  E  E  D  K  G  K  T  E  E  D  A  V  K  E  K  M  K  K  G  G  E  T  K  E  K  Q  S  E  V  T  L  S  G  L  L  N  F  I  D  G  L  W  S  A  I  G  G  E  R  L  I  V  F  T  T  N  Y  V  E  K  L  D  P  A  L  I  R  R  G  R  M  D  K  H  I  V  L  S  Y  C  C  F  E  S  F  K  V  L  A  H  N  Y  L  D  V  V  E  S  H  V  H  F  P  Q  I  R  R  L  L  E  E  T  N  M  T  P  A  D  I  A  E  N  L  M  P  K  S  S  K  E  N  A  D  I  C  L  E  R  L  I  K  A  L  E  T  A  K  E  E  A  K  L  K  A  E  E  E  E  R  A  K  A  A  E  K  E  K  E  E  K  D  R  E  E  K  K  E  V  T  A  T  E  E  A  K  S  V  D  S  V  N  E  K  D  N  G  V  K  E  N  G  N  V  S  K  S  *  *  I  H  I  *  E  S  M  F  G  G  V  L  A  F  C  F  L  Q  L  A  E  L  V  I  S  C  W  *  R  L  I  R  K  L  F  L  I  M  K  H  S  N  F  S  I  T  I  H  I  L  P  </second_frame>
            <third_frame>   *  L  L  L  W  L  I  T  *  S  M  T  S  M  I  L  S  *  H  R  L  R  T  I  P  S  *  E  N  S  *  *  I  Q  Q  V  N  L  L  L  *  L  K  T  *  I  V  P  L  T  *  Q  V  N  E  R  R  I  R  R  R  K  K  R  K  I  K  E  K  L  R  K  M  P  S  R  R  R  *  K  K  A  E  R  R  K  K  S  K  V  R  *  L  Y  Q  D  Y  *  T  S  L  M  V  Y  G  Q  L  L  A  V  K  G  *  S  S  S  L  Q  T  T  W  R  S  L  I  L  L  *  S  G  G  G  E  W  I  N  I  L  S  Y  H  T  V  A  L  S  H  S  K  F  L  H  I  T  I  L  T  S  L  N  L  M  F  T  F  L  R  F  V  V  Y  *  R  K  L  I  *  L  L  L  I  L  L  R  I  *  C  L  S  L  Q  R  K  M  Q  I  F  V  *  R  D  *  L  K  L  S  K  L  Q  K  R  K  R  N  L  R  L  R  K  K  R  E  Q  R  R  L  R  R  R  K  K  R  K  I  A  R  K  R  K  K  *  Q  L  L  K  K  L  R  V  L  T  V  *  T  K  K  I  M  V  L  R  K  M  V  M  L  A  K  V  D  E  Y  T  Y  K  K  V  C  L  E  V  F  *  L  S  V  F  Y  N  *  L  N  L  *  *  V  V  G  E  G  *  *  E  N  F  F  *  S  *  N  T  Q  I  L  A  S  Q  S  I  F  C  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="128244" stop="127435"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>807</number_coding_nucleotides>
                  <number_encoded_amino_acids>269</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MIAAMANYLKYDVYDLELTSVKDNTELRKLLIDTTGKSIIVIEDIDCSLDLTGQRETNKKKKEEEDKGKTEEDAVKEKMKKGGETKEKQSEVTLSGLLNFIDGLWSAIGGERLIVFTTNYVEKLDPALIRRGRMDKHIVLSYCCFESFKVLAHNYLDVVESHVHFPQIRRLLEETNMTPADIAENLMPKSSKENADICLERLIKALETAKEEAKLKAEEEERAKAAEKEKEEKDREEKKEVTATEEAKSVDSVNEKDNGVKENGNVSKS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="17" PGL_strand="-" PGL_start="129042" PGL_stop="128431"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="129042" e_stop="128431"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="129042" e_stop="128431" e_length="612"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="129042" stop="128431"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322889" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="17" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TTGAATACTCCAATTAACTTCAAGATGATGCAAGATCTATGGACTCAATTGGGTCCTACCATTGCAGCCATCATGTTCACCTGGACCATGTACCAGAACTACTTCCCTCACGAACTTCGCGGTCATATTAGGAGGTATACCGATAAACTCGTGAACTATTTCTATCCTTATATGCACATTATCTTTTATGAACTTGAAACTGAAGGGTGGTTTGAGCGGAGCAAAGCTTACGTATCGATTGAAAGGTACCTAAGCAAGAGCTCGAGCACACAAGCTAAGCGTCTCAAAGCCAATTCGGTGAAGGATGGTCAATCGCTTGTCCTAACCATGGATGATCATGAGGAGATAACGGATGAATATAAAGGCGAGAAGGTTTGGTGGATTTCGAGCAAAAAACCAGCGAGCAGGCAGACAATATCTTTGTATAAGGAGGATGAGAAGAGATATTTCAAGCTAAAATTTCACAAAAAGAATCGCGACCTTGTCACAAATTCATACTTGAAGTATGTGTTGGATGAAGGAAAGGCGATATCTGTGAAAGAACGACAGAGAAAGCTGTACACGAACAATAAGGGAGATGGAGGTGGTTATAGATACAGGGGAGGGAGGATG</gDNA_template>
            <first_frame> L  N  T  P  I  N  F  K  M  M  Q  D  L  W  T  Q  L  G  P  T  I  A  A  I  M  F  T  W  T  M  Y  Q  N  Y  F  P  H  E  L  R  G  H  I  R  R  Y  T  D  K  L  V  N  Y  F  Y  P  Y  M  H  I  I  F  Y  E  L  E  T  E  G  W  F  E  R  S  K  A  Y  V  S  I  E  R  Y  L  S  K  S  S  S  T  Q  A  K  R  L  K  A  N  S  V  K  D  G  Q  S  L  V  L  T  M  D  D  H  E  E  I  T  D  E  Y  K  G  E  K  V  W  W  I  S  S  K  K  P  A  S  R  Q  T  I  S  L  Y  K  E  D  E  K  R  Y  F  K  L  K  F  H  K  K  N  R  D  L  V  T  N  S  Y  L  K  Y  V  L  D  E  G  K  A  I  S  V  K  E  R  Q  R  K  L  Y  T  N  N  K  G  D  G  G  G  Y  R  Y  R  G  G  R  M </first_frame>
            <second_frame>  *  I  L  Q  L  T  S  R  *  C  K  I  Y  G  L  N  W  V  L  P  L  Q  P  S  C  S  P  G  P  C  T  R  T  T  S  L  T  N  F  A  V  I  L  G  G  I  P  I  N  S  *  T  I  S  I  L  I  C  T  L  S  F  M  N  L  K  L  K  G  G  L  S  G  A  K  L  T  Y  R  L  K  G  T  *  A  R  A  R  A  H  K  L  S  V  S  K  P  I  R  *  R  M  V  N  R  L  S  *  P  W  M  I  M  R  R  *  R  M  N  I  K  A  R  R  F  G  G  F  R  A  K  N  Q  R  A  G  R  Q  Y  L  C  I  R  R  M  R  R  D  I  S  S  *  N  F  T  K  R  I  A  T  L  S  Q  I  H  T  *  S  M  C  W  M  K  E  R  R  Y  L  *  K  N  D  R  E  S  C  T  R  T  I  R  E  M  E  V  V  I  D  T  G  E  G  G   </second_frame>
            <third_frame>   E  Y  S  N  *  L  Q  D  D  A  R  S  M  D  S  I  G  S  Y  H  C  S  H  H  V  H  L  D  H  V  P  E  L  L  P  S  R  T  S  R  S  Y  *  E  V  Y  R  *  T  R  E  L  F  L  S  L  Y  A  H  Y  L  L  *  T  *  N  *  R  V  V  *  A  E  Q  S  L  R  I  D  *  K  V  P  K  Q  E  L  E  H  T  S  *  A  S  Q  S  Q  F  G  E  G  W  S  I  A  C  P  N  H  G  *  S  *  G  D  N  G  *  I  *  R  R  E  G  L  V  D  F  E  Q  K  T  S  E  Q  A  D  N  I  F  V  *  G  G  *  E  E  I  F  Q  A  K  I  S  Q  K  E  S  R  P  C  H  K  F  I  L  E  V  C  V  G  *  R  K  G  D  I  C  E  R  T  T  E  K  A  V  H  E  Q  *  G  R  W  R  W  L  *  I  Q  G  R  E  D  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="17" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="129042" stop="128431"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>612</number_coding_nucleotides>
                  <number_encoded_amino_acids>204</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LNTPINFKMMQDLWTQLGPTIAAIMFTWTMYQNYFPHELRGHIRRYTDKLVNYFYPYMHIIFYELETEGWFERSKAYVSIERYLSKSSSTQAKRLKANSVKDGQSLVLTMDDHEEITDEYKGEKVWWISSKKPASRQTISLYKEDEKRYFKLKFHKKNRDLVTNSYLKYVLDEGKAISVKERQRKLYTNNKGDGGGYRYRGGRM</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="18" PGL_strand="-" PGL_start="133590" PGL_stop="133098"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133590" e_stop="133098"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.966"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.966">
            <gDNA_exon_boundary e_start="133590" e_stop="133098" e_length="493"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133590" stop="133098"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U342256" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="18" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GGTTGCCCGGAAATCTCTTCCATATCTTCTTTAAAAACAACTCCGCTTACCATGATATCCATCACCAGCTTTACGGGACCAAGTATAACTATTCACAGCCTTTCTTTGTGACGTGGGATAGGATACTTGGTACCTACATGCCATATGAACTTGAGAGGAGACCAGAAGGAGGTTTTGAAGCTAAGCCTGTTAAAGATTGCAAGGAACATTGACAATACTGTTAGTACATGTTTGTCATAGAGTATGTACCACTGCAATTTTTGCATTATTCTAATGCTTAGTTTACTCATTTAATTTGTATAGAGTATATAGTTAAAAGGGTTCTGCATATATTGTTGTATAACTGATGTTGGTTTCGAGGTTTGAGAAAGGAATAGGGTCGAATAATAGTTTCCTTTTTAAACATTGTCTCAAGATCTGATATCTGGTATATTCAACTGCAGGCAGAGAGATAAATGATTACTGAAATACATTGTGTGCCTTTAATTCTTTA</gDNA_template>
            <first_frame> G  C  P  E  I  S  S  I  S  S  L  K  T  T  P  L  T  M  I  S  I  T  S  F  T  G  P  S  I  T  I  H  S  L  S  L  *  R  G  I  G  Y  L  V  P  T  C  H  M  N  L  R  G  D  Q  K  E  V  L  K  L  S  L  L  K  I  A  R  N  I  D  N  T  V  S  T  C  L  S  *  S  M  Y  H  C  N  F  C  I  I  L  M  L  S  L  L  I  *  F  V  *  S  I  *  L  K  G  F  C  I  Y  C  C  I  T  D  V  G  F  E  V  *  E  R  N  R  V  E  *  *  F  P  F  *  T  L  S  Q  D  L  I  S  G  I  F  N  C  R  Q  R  D  K  *  L  L  K  Y  I  V  C  L  *  F  F  </first_frame>
            <second_frame>  V  A  R  K  S  L  P  Y  L  L  *  K  Q  L  R  L  P  *  Y  P  S  P  A  L  R  D  Q  V  *  L  F  T  A  F  L  C  D  V  G  *  D  T  W  Y  L  H  A  I  *  T  *  E  E  T  R  R  R  F  *  S  *  A  C  *  R  L  Q  G  T  L  T  I  L  L  V  H  V  C  H  R  V  C  T  T  A  I  F  A  L  F  *  C  L  V  Y  S  F  N  L  Y  R  V  Y  S  *  K  G  S  A  Y  I  V  V  *  L  M  L  V  S  R  F  E  K  G  I  G  S  N  N  S  F  L  F  K  H  C  L  K  I  *  Y  L  V  Y  S  T  A  G  R  E  I  N  D  Y  *  N  T  L  C  A  F  N  S  L </second_frame>
            <third_frame>   L  P  G  N  L  F  H  I  F  F  K  N  N  S  A  Y  H  D  I  H  H  Q  L  Y  G  T  K  Y  N  Y  S  Q  P  F  F  V  T  W  D  R  I  L  G  T  Y  M  P  Y  E  L  E  R  R  P  E  G  G  F  E  A  K  P  V  K  D  C  K  E  H  *  Q  Y  C  *  Y  M  F  V  I  E  Y  V  P  L  Q  F  L  H  Y  S  N  A  *  F  T  H  L  I  C  I  E  Y  I  V  K  R  V  L  H  I  L  L  Y  N  *  C  W  F  R  G  L  R  K  E  *  G  R  I  I  V  S  F  L  N  I  V  S  R  S  D  I  W  Y  I  Q  L  Q  A  E  R  *  M  I  T  E  I  H  C  V  P  L  I  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="18" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133588" stop="133379"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LPGNLFHIFFKNNSAYHDIHHQLYGTKYNYSQPFFVTWDRILGTYMPYELERRPEGGFEAKPVKDCKEH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="19" PGL_strand="-" PGL_start="137079" PGL_stop="136560"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="137079" e_stop="136560"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.962"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.962">
            <gDNA_exon_boundary e_start="137079" e_stop="136560" e_length="520"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="137079" stop="136560"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339830" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="19" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCAAAACAATAATATCCTCTCTGAAAAATTGATTATTTTTGTTAAATTTTTTCTGAATTTTGTTTTTTTTTTGCTGTTTGAAATTCCTTCCAATTCTATTTGGAAGAGAATTTCAATCAAACCATATATCTCCACTGTTCTCTTTCTCTACAAACCCTAATTTCAATTTTATACAAAGTTTGAATCTTTTACAAAGTTTCAAAGAAATCTCAGTTTTTCTTTTATTGGGTATTTGTTTGTTTTCTTTTTAAGGGCAATTTTGAAAAAGATAGTGATTTTCTTTTTCCTTTTAAGGGTAATTTTCAAAAAAAAAAAAAAAGATTTAAAAAGGAACAAATTTTGTTTCTTTATTGGGTTTTTTCAATTAAGGGTGATTTCAAGAAGGTATAAAGGAAGGATCTTGGTAATAGTTTGTATTTTTGAGATGGTGGGTAGTGTGAATATTGATCAACAGGGGAAGGGAGGATATGTGTCAGATGAAGTTTTGGGAACATTTATACCAATAGTTGTGTATTGGGTA</gDNA_template>
            <first_frame> A  K  Q  *  Y  P  L  *  K  I  D  Y  F  C  *  I  F  S  E  F  C  F  F  F  A  V  *  N  S  F  Q  F  Y  L  E  E  N  F  N  Q  T  I  Y  L  H  C  S  L  S  L  Q  T  L  I  S  I  L  Y  K  V  *  I  F  Y  K  V  S  K  K  S  Q  F  F  F  Y  W  V  F  V  C  F  L  F  K  G  N  F  E  K  D  S  D  F  L  F  P  F  K  G  N  F  Q  K  K  K  K  R  F  K  K  E  Q  I  L  F  L  Y  W  V  F  S  I  K  G  D  F  K  K  V  *  R  K  D  L  G  N  S  L  Y  F  *  D  G  G  *  C  E  Y  *  S  T  G  E  G  R  I  C  V  R  *  S  F  G  N  I  Y  T  N  S  C  V  L  G  </first_frame>
            <second_frame>  Q  N  N  N  I  L  S  E  K  L  I  I  F  V  K  F  F  L  N  F  V  F  F  L  L  F  E  I  P  S  N  S  I  W  K  R  I  S  I  K  P  Y  I  S  T  V  L  F  L  Y  K  P  *  F  Q  F  Y  T  K  F  E  S  F  T  K  F  Q  R  N  L  S  F  S  F  I  G  Y  L  F  V  F  F  L  R  A  I  L  K  K  I  V  I  F  F  F  L  L  R  V  I  F  K  K  K  K  K  D  L  K  R  N  K  F  C  F  F  I  G  F  F  Q  L  R  V  I  S  R  R  Y  K  G  R  I  L  V  I  V  C  I  F  E  M  V  G  S  V  N  I  D  Q  Q  G  K  G  G  Y  V  S  D  E  V  L  G  T  F  I  P  I  V  V  Y  W  V </second_frame>
            <third_frame>   K  T  I  I  S  S  L  K  N  *  L  F  L  L  N  F  F  *  I  L  F  F  F  C  C  L  K  F  L  P  I  L  F  G  R  E  F  Q  S  N  H  I  S  P  L  F  S  F  S  T  N  P  N  F  N  F  I  Q  S  L  N  L  L  Q  S  F  K  E  I  S  V  F  L  L  L  G  I  C  L  F  S  F  *  G  Q  F  *  K  R  *  *  F  S  F  S  F  *  G  *  F  S  K  K  K  K  K  I  *  K  G  T  N  F  V  S  L  L  G  F  F  N  *  G  *  F  Q  E  G  I  K  E  G  S  W  *  *  F  V  F  L  R  W  W  V  V  *  I  L  I  N  R  G  R  E  D  M  C  Q  M  K  F  W  E  H  L  Y  Q  *  L  C  I  G   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="19" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="136919" stop="136560"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FQFYTKFESFTKFQRNLSFSFIGYLFVFFLRAILKKIVIFFFLLRVIFKKKKKDLKRNKFCFFIGFFQLRVISRRYKGRILVIVCIFEMVGSVNIDQQGKGGYVSDEVLGTFIPIVVYWV</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="20" PGL_strand="+" PGL_start="136789" PGL_stop="137018"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="136789" e_stop="137018"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.957"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.957">
            <gDNA_exon_boundary e_start="136789" e_stop="137018" e_length="230"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="136789" stop="137018"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U339831" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="20" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AAAAGGAAAAAGAAAATCACTATCTTTTTCAAAATTGCCCTTAAAAAGAAAACAAACAAATACCCAATAAAAGAAAAACTGAGATTTCTTTGAAACTTTGTAAAAGATTCAAACTTTGTATAAAATTGAAATTAGGGTTTGTAGAGAAAGAGAACAGTGGAGATATATGGTTTGATTGAAATTCTCTTCCAAATAGAATTGGAAGGAATTTCAAACAGCAAAAAAAAAAC</gDNA_template>
            <first_frame> K  R  K  K  K  I  T  I  F  F  K  I  A  L  K  K  K  T  N  K  Y  P  I  K  E  K  L  R  F  L  *  N  F  V  K  D  S  N  F  V  *  N  *  N  *  G  L  *  R  K  R  T  V  E  I  Y  G  L  I  E  I  L  F  Q  I  E  L  E  G  I  S  N  S  K  K  K   </first_frame>
            <second_frame>  K  G  K  R  K  S  L  S  F  S  K  L  P  L  K  R  K  Q  T  N  T  Q  *  K  K  N  *  D  F  F  E  T  L  *  K  I  Q  T  L  Y  K  I  E  I  R  V  C  R  E  R  E  Q  W  R  Y  M  V  *  L  K  F  S  S  K  *  N  W  K  E  F  Q  T  A  K  K  K  </second_frame>
            <third_frame>   K  E  K  E  N  H  Y  L  F  Q  N  C  P  *  K  E  N  K  Q  I  P  N  K  R  K  T  E  I  S  L  K  L  C  K  R  F  K  L  C  I  K  L  K  L  G  F  V  E  K  E  N  S  G  D  I  W  F  D  *  N  S  L  P  N  R  I  G  R  N  F  K  Q  Q  K  K  N </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C05HBa0145P19.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="21" PGL_strand="-" PGL_start="142480" PGL_stop="139664"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="142480" e_stop="142356"/>
            <exon e_start="142262" e_stop="142216"/>
            <exon e_start="141631" e_stop="141527"/>
            <exon e_start="141394" e_stop="141314"/>
            <exon e_start="141035" e_stop="140924"/>
            <exon e_start="140819" e_stop="140757"/>
            <exon e_start="140620" e_stop="140533"/>
            <exon e_start="140418" e_stop="140351"/>
            <exon e_start="139994" e_stop="139898"/>
            <exon e_start="139795" e_stop="139664"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.346" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.903" acc_prob="0.995" e_score="1.000"/>
          <exon-intron don_prob="0.977" acc_prob="0.836" e_score="1.000"/>
          <exon-intron don_prob="0.987" acc_prob="0.996" e_score="1.000"/>
          <exon-intron don_prob="0.991" acc_prob="0.986" e_score="1.000"/>
          <exon-intron don_prob="0.922" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.923" acc_prob="0.997" e_score="1.000"/>
          <exon-intron don_prob="0.995" acc_prob="0.990" e_score="1.000"/>
          <exon-only e_score="0.977"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="142480" e_stop="142356" e_length="125"/>
          </exon>
          <intron i_serial="1" don_prob="0.346" acc_prob="0.999">
            <gDNA_intron_boundary i_start="142355" i_stop="142263" i_length="93"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="142262" e_stop="142216" e_length="47"/>
          </exon>
          <intron i_serial="2" don_prob="0.987" acc_prob="0.999">
            <gDNA_intron_boundary i_start="142215" i_stop="141632" i_length="584"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="141631" e_stop="141527" e_length="105"/>
          </exon>
          <intron i_serial="3" don_prob="0.903" acc_prob="0.995">
            <gDNA_intron_boundary i_start="141526" i_stop="141395" i_length="132"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="141394" e_stop="141314" e_length="81"/>
          </exon>
          <intron i_serial="4" don_prob="0.977" acc_prob="0.836">
            <gDNA_intron_boundary i_start="141313" i_stop="141036" i_length="278"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="141035" e_stop="140924" e_length="112"/>
          </exon>
          <intron i_serial="5" don_prob="0.987" acc_prob="0.996">
            <gDNA_intron_boundary i_start="140923" i_stop="140820" i_length="104"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="140819" e_stop="140757" e_length="63"/>
          </exon>
          <intron i_serial="6" don_prob="0.991" acc_prob="0.986">
            <gDNA_intron_boundary i_start="140756" i_stop="140621" i_length="136"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="140620" e_stop="140533" e_length="88"/>
          </exon>
          <intron i_serial="7" don_prob="0.922" acc_prob="0.997">
            <gDNA_intron_boundary i_start="140532" i_stop="140419" i_length="114"/>
          </intron>
          <exon e_serial="8" e_score="1.000">
            <gDNA_exon_boundary e_start="140418" e_stop="140351" e_length="68"/>
          </exon>
          <intron i_serial="8" don_prob="0.923" acc_prob="0.997">
            <gDNA_intron_boundary i_start="140350" i_stop="139995" i_length="356"/>
          </intron>
          <exon e_serial="9" e_score="1.000">
            <gDNA_exon_boundary e_start="139994" e_stop="139898" e_length="97"/>
          </exon>
          <intron i_serial="9" don_prob="0.995" acc_prob="0.990">
            <gDNA_intron_boundary i_start="139897" i_stop="139796" i_length="102"/>
          </intron>
          <exon e_serial="10" e_score="0.977">
            <gDNA_exon_boundary e_start="139795" e_stop="139664" e_length="132"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="142480" stop="142356"/>
              <exon start="142262" stop="142216"/>
              <exon start="141631" stop="141527"/>
              <exon start="141394" stop="141314"/>
              <exon start="141035" stop="140924"/>
              <exon start="140819" stop="140757"/>
              <exon start="140620" stop="140533"/>
              <exon start="140418" stop="140351"/>
              <exon start="139994" stop="139898"/>
              <exon start="139795" stop="139664"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U328357" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="21" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AACAAATGGATCTTTCCGACATCGCCCGAAAGCTCGGTCTCACTGAGACCAAACATCTGGTTCGCAAAGCGGCCGAGCTCCGACGACTCGCCGATGTACAGTTCGATTCCTCCGCCATTGGCGTT : GGGGAGATCTGCAAGGCTATTATTTGCTTAGAGATTGCTGCTTCTAG : GATGGATGTGGTGTTTGATCGTCAGGCAGCGATAAAATTGAGTGGGATGTCGGAGAAGGCTTACAACAGATCATTCACTTCAATGCAGAATGGAATTGGAGTGAA : AAACAAGCTTGATATTAGAGAATTGGCAATTCAGTTTGGGTGTATCAGGCTCATTCCTTTTGTTCAAAAAGGTCTATCATT : ATACAAAGACCGGTTTCGTACATCCTTGCCACCTTCTAGAAGGGCAAGTGCTGATTTCAGTCGACCTGTGTTCACTGCTGCTGCGTTCTATCTGTGTGCAAAAAGGCACAAG : CTCAAGGTTGATAAAATGAAGCTAATTGAACTTTGTGGAACATCAGAACCTGAATTTGCTAGT : GTTTCTACCTCAATGAATGATCTTTGTTTTGATGTTTTTGGGACATCAAAGGAGAAAAAGGATCCCAAGACAGTGAAGGGGAACCGAG : AACTGCTCGATGCATTACCTGAAAAAAGGAGGGTTGAAGACGGTGGCTATTCATCCGAGGATGATAAT : TCATCAGCTTACAAGAAGCGTAAACGCATGGATGAACATGCTTATCAGGAATGGAAATCTACTGTCCTCTCATCAAAAAACCAAAGCGGCCAAAAAG : CTCCTAAACAAACCAAACAAGCCCGGCTGGACTTCATGAAGAAAGTTCCTGAAACTAAAGTCCAAGCAACATAAGTCTCCATTGTCCTTCAATTAGACAAATTTTGGTTGATTTTATCAAACAGTGGACACT</gDNA_template>
            <first_frame> N  K  W  I  F  P  T  S  P  E  S  S  V  S  L  R  P  N  I  W  F  A  K  R  P  S  S  D  D  S  P  M  Y  S  S  I  P  P  P  L  A  L :   G  R  S  A  R  L  L  F  A  *  R  L  L  L  L   : G  W  M  W  C  L  I  V  R  Q  R  *  N  *  V  G  C  R  R  R  L  T  T  D  H  S  L  Q  C  R  M  E  L  E  *   : K  T  S  L  I  L  E  N  W  Q  F  S  L  G  V  S  G  S  F  L  L  F  K  K  V  Y  H   : Y  T  K  T  G  F  V  H  P  C  H  L  L  E  G  Q  V  L  I  S  V  D  L  C  S  L  L  L  R  S  I  C  V  Q  K  G  T  S :   S  R  L  I  K  *  S  *  L  N  F  V  E  H  Q  N  L  N  L  L  V :   F  L  P  Q  *  M  I  F  V  L  M  F  L  G  H  Q  R  R  K  R  I  P  R  Q  *  R  G  T  E  :  N  C  S  M  H  Y  L  K  K  G  G  L  K  T  V  A  I  H  P  R  M  I  I :   H  Q  L  T  R  S  V  N  A  W  M  N  M  L  I  R  N  G  N  L  L  S  S  H  Q  K  T  K  A  A  K  K  :  L  L  N  K  P  N  K  P  G  W  T  S  *  R  K  F  L  K  L  K  S  K  Q  H  K  S  P  L  S  F  N  *  T  N  F  G  *  F  Y  Q  T  V  D  T </first_frame>
            <second_frame>  T  N  G  S  F  R  H  R  P  K  A  R  S  H  *  D  Q  T  S  G  S  Q  S  G  R  A  P  T  T  R  R  C  T  V  R  F  L  R  H  W  R   : W  G  D  L  Q  G  Y  Y  L  L  R  D  C  C  F  *  :  D  G  C  G  V  *  S  S  G  S  D  K  I  E  W  D  V  G  E  G  L  Q  Q  I  I  H  F  N  A  E  W  N  W  S  E  :  K  Q  A  *  Y  *  R  I  G  N  S  V  W  V  Y  Q  A  H  S  F  C  S  K  R  S  I  I  :  I  Q  R  P  V  S  Y  I  L  A  T  F  *  K  G  K  C  *  F  Q  S  T  C  V  H  C  C  C  V  L  S  V  C  K  K  A  Q   : A  Q  G  *  *  N  E  A  N  *  T  L  W  N  I  R  T  *  I  C  *   : C  F  Y  L  N  E  *  S  L  F  *  C  F  W  D  I  K  G  E  K  G  S  Q  D  S  E  G  E  P  R :   T  A  R  C  I  T  *  K  K  E  G  *  R  R  W  L  F  I  R  G  *  *   : F  I  S  L  Q  E  A  *  T  H  G  *  T  C  L  S  G  M  E  I  Y  C  P  L  I  K  K  P  K  R  P  K  S :   S  *  T  N  Q  T  S  P  A  G  L  H  E  E  S  S  *  N  *  S  P  S  N  I  S  L  H  C  P  S  I  R  Q  I  L  V  D  F  I  K  Q  W  T   </second_frame>
            <third_frame>   Q  M  D  L  S  D  I  A  R  K  L  G  L  T  E  T  K  H  L  V  R  K  A  A  E  L  R  R  L  A  D  V  Q  F  D  S  S  A  I  G  V  :  G  E  I  C  K  A  I  I  C  L  E  I  A  A  S  R :   M  D  V  V  F  D  R  Q  A  A  I  K  L  S  G  M  S  E  K  A  Y  N  R  S  F  T  S  M  Q  N  G  I  G  V  K :   N  K  L  D  I  R  E  L  A  I  Q  F  G  C  I  R  L  I  P  F  V  Q  K  G  L  S  L :   Y  K  D  R  F  R  T  S  L  P  P  S  R  R  A  S  A  D  F  S  R  P  V  F  T  A  A  A  F  Y  L  C  A  K  R  H  K  :  L  K  V  D  K  M  K  L  I  E  L  C  G  T  S  E  P  E  F  A  S  :  V  S  T  S  M  N  D  L  C  F  D  V  F  G  T  S  K  E  K  K  D  P  K  T  V  K  G  N  R   : E  L  L  D  A  L  P  E  K  R  R  V  E  D  G  G  Y  S  S  E  D  D  N  :  S  S  A  Y  K  K  R  K  R  M  D  E  H  A  Y  Q  E  W  K  S  T  V  L  S  S  K  N  Q  S  G  Q  K   : A  P  K  Q  T  K  Q  A  R  L  D  F  M  K  K  V  P  E  T  K  V  Q  A  T  *  V  S  I  V  L  Q  L  D  K  F  W  L  I  L  S  N  S  G  H  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="21" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="142478" stop="142356"/>
                    <exon start="142262" stop="142216"/>
                    <exon start="141631" stop="141527"/>
                    <exon start="141394" stop="141314"/>
                    <exon start="141035" stop="140924"/>
                    <exon start="140819" stop="140757"/>
                    <exon start="140620" stop="140533"/>
                    <exon start="140418" stop="140351"/>
                    <exon start="139994" stop="139898"/>
                    <exon start="139795" stop="139722"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>855</number_coding_nucleotides>
                  <number_encoded_amino_acids>285</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QMDLSDIARKLGLTETKHLVRKAAELRRLADVQFDSSAIGVGEICKAIICLEIAASRMDVVFDRQAAIKLSGMSEKAYNRSFTSMQNGIGVKNKLDIRELAIQFGCIRLIPFVQKGLSLYKDRFRTSLPPSRRASADFSRPVFTAAAFYLCAKRHKLKVDKMKLIELCGTSEPEFASVSTSMNDLCFDVFGTSKEKKDPKTVKGNRELLDALPEKRRVEDGGYSSEDDNSSAYKKRKRMDEHAYQEWKSTVLSSKNQSGQKAPKQTKQARLDFMKKVPETKVQAT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="22" PGL_strand="-" PGL_start="149295" PGL_stop="143099"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="149295" e_stop="149173"/>
            <exon e_start="148217" e_stop="148020"/>
            <exon e_start="147177" e_stop="147099"/>
            <exon e_start="145773" e_stop="145631"/>
            <exon e_start="145362" e_stop="145249"/>
            <exon e_start="144342" e_stop="144211"/>
            <exon e_start="143672" e_stop="143559"/>
            <exon e_start="143460" e_stop="143099"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.957" acc_prob="0.947" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.966" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.933" e_score="1.000"/>
          <exon-intron don_prob="0.999" acc_prob="0.999" e_score="1.000"/>
          <exon-intron don_prob="0.998" acc_prob="0.972" e_score="1.000"/>
          <exon-intron don_prob="0.902" acc_prob="0.992" e_score="1.000"/>
          <exon-only e_score="0.989"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="149295" e_stop="149173" e_length="123"/>
          </exon>
          <intron i_serial="1" don_prob="0.957" acc_prob="0.947">
            <gDNA_intron_boundary i_start="149172" i_stop="148218" i_length="955"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="148217" e_stop="148020" e_length="198"/>
          </exon>
          <intron i_serial="2" don_prob="0.998" acc_prob="0.993">
            <gDNA_intron_boundary i_start="148019" i_stop="147178" i_length="842"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="147177" e_stop="147099" e_length="79"/>
          </exon>
          <intron i_serial="3" don_prob="0.999" acc_prob="0.966">
            <gDNA_intron_boundary i_start="147098" i_stop="145774" i_length="1325"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="145773" e_stop="145631" e_length="143"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.933">
            <gDNA_intron_boundary i_start="145630" i_stop="145363" i_length="268"/>
          </intron>
          <exon e_serial="5" e_score="1.000">
            <gDNA_exon_boundary e_start="145362" e_stop="145249" e_length="114"/>
          </exon>
          <intron i_serial="5" don_prob="0.999" acc_prob="0.999">
            <gDNA_intron_boundary i_start="145248" i_stop="144343" i_length="906"/>
          </intron>
          <exon e_serial="6" e_score="1.000">
            <gDNA_exon_boundary e_start="144342" e_stop="144211" e_length="132"/>
          </exon>
          <intron i_serial="6" don_prob="0.998" acc_prob="0.972">
            <gDNA_intron_boundary i_start="144210" i_stop="143673" i_length="538"/>
          </intron>
          <exon e_serial="7" e_score="1.000">
            <gDNA_exon_boundary e_start="143672" e_stop="143559" e_length="114"/>
          </exon>
          <intron i_serial="7" don_prob="0.902" acc_prob="0.992">
            <gDNA_intron_boundary i_start="143558" i_stop="143461" i_length="98"/>
          </intron>
          <exon e_serial="8" e_score="0.989">
            <gDNA_exon_boundary e_start="143460" e_stop="143099" e_length="362"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="149295" stop="149173"/>
              <exon start="148217" stop="148020"/>
              <exon start="147177" stop="147099"/>
              <exon start="145773" stop="145631"/>
              <exon start="145362" stop="145249"/>
              <exon start="144342" stop="144211"/>
              <exon start="143672" stop="143559"/>
              <exon start="143460" stop="143099"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318843" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="22" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GTGAAAAAAATAGCGGTTGATATTGTTCGTGATTATACTGGTTCTGAGGATGGCTTGGAATCTCTTGGCAAGTATTCTAACGTCGTGCTTCCTTCTCTGTCTCGCCTTCTTGGTGAAAAAAAG : GTGGTTTCTGAACCTGCGGCTCAAGCACTGGTAAATCTGTCACAAAAGCCAGAGTTGGCAGGTAAGATGGTTGAGATGCATATGGTTAGGACATCGATGGAAACCCTGTACAAGCAAGATTGTGAAATCACAAGTCTGCTGATTATGCTCCTTGTTAATCTTACTCAGCTGGATGCTGGTATTGATTCTTTGCTTCAG : TCTGCAGATGAGAAGATGCATGGTTTATATGTCATGAAACTTGTGAGATCATTTTGTTCGTCCTCCTGTGAGGGAAAAG : TTGATCCCTTTGAACATGTGGCTTCTGTACTTGTCAACATTTCTAAGAAGGAACATGGGAGAAAGCTTCTGCTTGATCAAAAACGATGCCTACTAAAGCAAATAGTCCGTAATGATTCTAAGAGCTTGTTACGAAAGAGAGGG : GTCGCAGGAACCATCCGCAACTGCTGCTTCGAAGCTGAGAATCAGCTGCAAAATTTGCTTCTGATTTCTGAATTCTTATGGCCAGCTCTGCTCCTGCCTGTTGCTGGAAATAAG : GTCTATAGTGAGGAAGACACTCGGAAAATGCCACTAGAGCTTGCAAGTGCACTCTCAATCGAACGAGAACCCGTTACTGATCCTGAAATTCGTGTACAGGCGCTAGAGGCTATTTATTTGCTCATATTACAG : GAAGCTGGCAGAAGAGCATTTTGGTCAGTGAATGGTCCCCGGATATTGCAAGTGGGCTATGCAGACGAGGATGATCCTAAAGCAATGGAAGCATATGAGCGAGCTGGCTCCTTG : CTGATTCAAGAGAGCGGCCTCGATGAAGAATTAACAGATACGTCTTCGTTAGCAGAGACATCTTCGTAGACATCCTACTTTCTTGCTGGTTTTGATTCTACAATAGCAACGAGTTCCAACAATCAATTAGACAATCTGCAGGTTGCTTAAGAGTAGTCAAGCTCTATAGAAGTGGAAGGTCCAAAGTGTACTTTGAATTATTATATTTTTTGGGTTTCTTGTCGCCGGGTTAGTTATGATCCTCTTAAAGGTTGTTATATCAAGGACTCGGGTGATGTATTCCCAGAGGTTATTGTTATTACTGGATAATTTAAGGCCCGCGATACGGGTCCAATATAATTTTACATTTTACATAAATTCAC</gDNA_template>
            <first_frame> V  K  K  I  A  V  D  I  V  R  D  Y  T  G  S  E  D  G  L  E  S  L  G  K  Y  S  N  V  V  L  P  S  L  S  R  L  L  G  E  K  K  :  V  V  S  E  P  A  A  Q  A  L  V  N  L  S  Q  K  P  E  L  A  G  K  M  V  E  M  H  M  V  R  T  S  M  E  T  L  Y  K  Q  D  C  E  I  T  S  L  L  I  M  L  L  V  N  L  T  Q  L  D  A  G  I  D  S  L  L  Q  :  S  A  D  E  K  M  H  G  L  Y  V  M  K  L  V  R  S  F  C  S  S  S  C  E  G  K   : V  D  P  F  E  H  V  A  S  V  L  V  N  I  S  K  K  E  H  G  R  K  L  L  L  D  Q  K  R  C  L  L  K  Q  I  V  R  N  D  S  K  S  L  L  R  K  R  G  :  V  A  G  T  I  R  N  C  C  F  E  A  E  N  Q  L  Q  N  L  L  L  I  S  E  F  L  W  P  A  L  L  L  P  V  A  G  N  K  :  V  Y  S  E  E  D  T  R  K  M  P  L  E  L  A  S  A  L  S  I  E  R  E  P  V  T  D  P  E  I  R  V  Q  A  L  E  A  I  Y  L  L  I  L  Q  :  E  A  G  R  R  A  F  W  S  V  N  G  P  R  I  L  Q  V  G  Y  A  D  E  D  D  P  K  A  M  E  A  Y  E  R  A  G  S  L  :  L  I  Q  E  S  G  L  D  E  E  L  T  D  T  S  S  L  A  E  T  S  S  *  T  S  Y  F  L  A  G  F  D  S  T  I  A  T  S  S  N  N  Q  L  D  N  L  Q  V  A  *  E  *  S  S  S  I  E  V  E  G  P  K  C  T  L  N  Y  Y  I  F  W  V  S  C  R  R  V  S  Y  D  P  L  K  G  C  Y  I  K  D  S  G  D  V  F  P  E  V  I  V  I  T  G  *  F  K  A  R  D  T  G  P  I  *  F  Y  I  L  H  K  F   </first_frame>
            <second_frame>  *  K  K  *  R  L  I  L  F  V  I  I  L  V  L  R  M  A  W  N  L  L  A  S  I  L  T  S  C  F  L  L  C  L  A  F  L  V  K  K  R :   W  F  L  N  L  R  L  K  H  W  *  I  C  H  K  S  Q  S  W  Q  V  R  W  L  R  C  I  W  L  G  H  R  W  K  P  C  T  S  K  I  V  K  S  Q  V  C  *  L  C  S  L  L  I  L  L  S  W  M  L  V  L  I  L  C  F  S :   L  Q  M  R  R  C  M  V  Y  M  S  *  N  L  *  D  H  F  V  R  P  P  V  R  E  K  :  L  I  P  L  N  M  W  L  L  Y  L  S  T  F  L  R  R  N  M  G  E  S  F  C  L  I  K  N  D  A  Y  *  S  K  *  S  V  M  I  L  R  A  C  Y  E  R  E  G :   S  Q  E  P  S  A  T  A  A  S  K  L  R  I  S  C  K  I  C  F  *  F  L  N  S  Y  G  Q  L  C  S  C  L  L  L  E  I  R :   S  I  V  R  K  T  L  G  K  C  H  *  S  L  Q  V  H  S  Q  S  N  E  N  P  L  L  I  L  K  F  V  Y  R  R  *  R  L  F  I  C  S  Y  Y  R :   K  L  A  E  E  H  F  G  Q  *  M  V  P  G  Y  C  K  W  A  M  Q  T  R  M  I  L  K  Q  W  K  H  M  S  E  L  A  P  C :   *  F  K  R  A  A  S  M  K  N  *  Q  I  R  L  R  *  Q  R  H  L  R  R  H  P  T  F  L  L  V  L  I  L  Q  *  Q  R  V  P  T  I  N  *  T  I  C  R  L  L  K  S  S  Q  A  L  *  K  W  K  V  Q  S  V  L  *  I  I  I  F  F  G  F  L  V  A  G  L  V  M  I  L  L  K  V  V  I  S  R  T  R  V  M  Y  S  Q  R  L  L  L  L  L  D  N  L  R  P  A  I  R  V  Q  Y  N  F  T  F  Y  I  N  S  </second_frame>
            <third_frame>   E  K  N  S  G  *  Y  C  S  *  L  Y  W  F  *  G  W  L  G  I  S  W  Q  V  F  *  R  R  A  S  F  S  V  S  P  S  W  *  K  K   : G  G  F  *  T  C  G  S  S  T  G  K  S  V  T  K  A  R  V  G  R  *  D  G  *  D  A  Y  G  *  D  I  D  G  N  P  V  Q  A  R  L  *  N  H  K  S  A  D  Y  A  P  C  *  S  Y  S  A  G  C  W  Y  *  F  F  A  S   : V  C  R  *  E  D  A  W  F  I  C  H  E  T  C  E  I  I  L  F  V  L  L  *  G  K  S :   *  S  L  *  T  C  G  F  C  T  C  Q  H  F  *  E  G  T  W  E  K  A  S  A  *  S  K  T  M  P  T  K  A  N  S  P  *  *  F  *  E  L  V  T  K  E  R   : G  R  R  N  H  P  Q  L  L  L  R  S  *  E  S  A  A  K  F  A  S  D  F  *  I  L  M  A  S  S  A  P  A  C  C  W  K  *   : G  L  *  *  G  R  H  S  E  N  A  T  R  A  C  K  C  T  L  N  R  T  R  T  R  Y  *  S  *  N  S  C  T  G  A  R  G  Y  L  F  A  H  I  T   : G  S  W  Q  K  S  I  L  V  S  E  W  S  P  D  I  A  S  G  L  C  R  R  G  *  S  *  S  N  G  S  I  *  A  S  W  L  L   : A  D  S  R  E  R  P  R  *  R  I  N  R  Y  V  F  V  S  R  D  I  F  V  D  I  L  L  S  C  W  F  *  F  Y  N  S  N  E  F  Q  Q  S  I  R  Q  S  A  G  C  L  R  V  V  K  L  Y  R  S  G  R  S  K  V  Y  F  E  L  L  Y  F  L  G  F  L  S  P  G  *  L  *  S  S  *  R  L  L  Y  Q  G  L  G  *  C  I  P  R  G  Y  C  Y  Y  W  I  I  *  G  P  R  Y  G  S  N  I  I  L  H  F  T  *  I  H </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0145P19.1" strand="-"/>
                <serials PGL_serial="22" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="149295" stop="149173"/>
                    <exon start="148217" stop="148020"/>
                    <exon start="147177" stop="147099"/>
                    <exon start="145773" stop="145631"/>
                    <exon start="145362" stop="145249"/>
                    <exon start="144342" stop="144211"/>
                    <exon start="143672" stop="143559"/>
                    <exon start="143460" stop="143392"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>969</number_coding_nucleotides>
                  <number_encoded_amino_acids>323</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VKKIAVDIVRDYTGSEDGLESLGKYSNVVLPSLSRLLGEKKVVSEPAAQALVNLSQKPELAGKMVEMHMVRTSMETLYKQDCEITSLLIMLLVNLTQLDAGIDSLLQSADEKMHGLYVMKLVRSFCSSSCEGKVDPFEHVASVLVNISKKEHGRKLLLDQKRCLLKQIVRNDSKSLLRKRGVAGTIRNCCFEAENQLQNLLLISEFLWPALLLPVAGNKVYSEEDTRKMPLELASALSIEREPVTDPEIRVQALEAIYLLILQEAGRRAFWSVNGPRILQVGYADEDDPKAMEAYERAGSLLIQESGLDEELTDTSSLAETSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 38 chains have been computed
$ 
$ memory statistics:
$ 387696 bytes spliced alignments in total
$ 24 spliced alignments have been stored
$ 16154 bytes was the average size of a spliced alignment
$ 32160 bytes predicted gene locations in total
$ 22 predicted gene locations have been stored
$ 1461 bytes was the average size of a predicted gene location
$ 3 megabytes was the average size of the backtrace matrix
$ 43 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 05:50:52
-->
