<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 02:36:56"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C05HBa0091D14-YObnU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E243215" ref_strand="+" ref_description="SGN-E243215 [cLEE-2-E2]">
      <seq>ttattgtagatgaccaattttttcttcgaatacgaaattaaattacaatacacacaaaaaaaatatttgaattttttttatttaaactaaggaatgaaagaaaaaaacaaaataagaataagaaactcaaattattataataaaagaagtcaaaaaataatttttgtatgaaaaaattaaaatataccttgaactttgatagaagaatcatatatatccctaaatattttttttaaaaaaaaattagaagtaacaaatataaatttaaaactaattttttaactttcgttaaatgaagggtatatgtgagccattttctaacggcaggggtatatgtgagccgtttgtataacgataagggcatatatgaaccacttttattacgagggatatatcagctctaaatgacaaagttgagaggtatatcagacccttttccctattttttaaaatttcatac</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C05HBa0091D14.1" temp_strand="+" temp_description="C05HBa0091D14.1  CU457803.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0091D14 sequenced_by:sanger upload_account_name:uk">
        <position start="121554" stop="122599"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="121854" g_stop="122297" g_length="444"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="442" r_length="442" r_score="0.912"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0091D14.1" gen_strand="+" ref_id="SGN-E243215" ref_strand="+">
        <total_alignment_score>0.912</total_alignment_score>
        <cumulative_length_of_scored_exons>444</cumulative_length_of_scored_exons>
        <coverage percentage="0.965" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0091D14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E243215" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="121854" e_stop="122297"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTATTGTAGATGACCATATTTTTTCTTCGAATAAGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTATTCTTTAAACTAAGGAATG--A-AATAAAA-AAAATAAGAATAAGAAATTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAATAAATATAAATTTAAAACTAATTTTTTAACTTCCGTAAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGAGCTATATATGAGCCGTTTGTATAACGGTAAGGGCATATATGAGAGCCACTTTTCTAACGAGGGGTATATCAGCTCCAAATGACAAAGTTGAATGGTATATCAGACCCTTTTCCCTA</genome_strand>
        <mrna_strand>TTATTGTAGATGACCA-ATTTTTTCTTCGAATACGAAATTAAATTACAATACACACAAAAAAAATA-TTTGAATTTTTT-TTATTTAAACTAAGGAATGAAAGAAAAAAACAAAATAAGAATAAGAAACTCAAATTATTATAATAAAAGAAGTCAAAAAATAATTTTTGTATG-AAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATATCCCTAAATATTTTTTTTAAAAAAAAATTAGAAGTAACAAATATAAATTTAAAACTAATTTTTTAACTTTCGTTAAATGAAGGGTATATGTGAGCCATTTTCTAACGGCAGGGGTATATGTGAGCCGTTTGTATAACGATAAGGGCATATATGA-A-CCACTTTTATTACGAGGGATATATCAGCTCTAAATGACAAAGTTGAGAGGTATATCAGACCCTTTTCCCTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E728374" ref_strand="+" ref_description="SGN-E728374 [LA17CE03]">
      <seq>agatgatcaaccaggttctttctcatcttagcgggttatctgatcagggccagacacctccagtgtttcctgtaccagcacctcaggttccgggagtacaacatgcagctgttgtggctctccgcatggatgcctcattggaaataggcacatttcctcgattgactacagggcctataatgacgagtgatcaacatgaacttttcactaaattcttgaagttgaaacctctagtcttcaagggtgctgaatctgaggatgcctatgattttcttgttgattgtcatgagctgctacataagatggacatagtagaacggttcggggttgagtttgtgacctatcaatttcagggaaatgtcaaaatgtggtggcggtcgtatgttgagtgtcaaccagcacagcaccacctatgacttgggcatcattctctagcttatttatggaaaagtgtataccccggacgttgagggataggaggagagatgagttcctgagtctatagcaaggcaggatgtctgttactgcttatgaggctaaattttgtgcactatccaggtatgccacccagctttgcttcagtccacaagagcggattcaccgttttgtgaaaggattgaggtcagatttgcagatcccagccctacaggtagct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C05HBa0091D14.1" temp_strand="+" temp_description="C05HBa0091D14.1  CU457803.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0091D14 sequenced_by:sanger upload_account_name:uk">
        <position start="133206" stop="134460"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="133506" g_stop="134160" g_length="655"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="655" r_length="655" r_score="0.919"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0091D14.1" gen_strand="+" ref_id="SGN-E728374" ref_strand="+">
        <total_alignment_score>0.919</total_alignment_score>
        <cumulative_length_of_scored_exons>655</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0091D14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E728374" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="133506" e_stop="134160"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGATGATTAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAGGGCAAGACACCTCTAGTGTTTTCTGCACCAGCACCTCAGCTTTCGGGAGTACAACATGCAGCTGTTGTGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCATGTTTCCTCGATTGACTACAGGGCCTATAATGACGAGTGATCAGCACGAACTTTTCACTAAGTTCTTGAAATTGAAACCTCCAGTTTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTGGTTGATTATCATGAGCTGCTACATAAGATGGGCATAGTGGAACGATTCGGTGTTGAGTTCGTAACCTATCAGTTTCAGGGAAATGCCAAAATGTGGTGGCGATCGTATGTTGAGTGTCAACCAGCACAGGCACCAGCCATGACTTGGGCATCATTCTCTAGCTTATTTATGGAGAAGTATATA-CCCGGACTTTCAGGGATAGGAAGAGAGATGAGTTCCTGAGCCTAGAGCAAGGCATGATGTCGGTTACTGCTTATGAGGCTAAGTTTCGTGCATTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCAGATTCGCCGTTTTGTGAAGGGATTGAGGTCAGACTTGCAGATTCCAGCCTTACAGGTAGCT</genome_strand>
        <mrna_strand>AGATGATCAACCAGGTTCTTTCTCATCTTAGCGGGTTATCTGATCAGGGCCAGACACCTCCAGTGTTTCCTGTACCAGCACCTCAGGTTCCGGGAGTACAACATGCAGCTGTTGTGGCTCTCCGCATGGATGCCTCATTGGAAATAGGCACATTTCCTCGATTGACTACAGGGCCTATAATGACGAGTGATCAACATGAACTTTTCACTAAATTCTTGAAGTTGAAACCTCTAGTCTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTTGTTGATTGTCATGAGCTGCTACATAAGATGGACATAGTAGAACGGTTCGGGGTTGAGTTTGTGACCTATCAATTTCAGGGAAATGTCAAAATGTGGTGGCGGTCGTATGTTGAGTGTCAACCAGCACA-GCACCACCTATGACTTGGGCATCATTCTCTAGCTTATTTATGGAAAAGTGTATACCCCGGACGTTGAGGGATAGGAGGAGAGATGAGTTCCTGAGTCTATAGCAAGGCAGGATGTCTGTTACTGCTTATGAGGCTAAATTTTGTGCACTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCGGATTCACCGTTTTGTGAAAGGATTGAGGTCAGATTTGCAGATCCCAGCCCTACAGGTAGCT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352716" ref_strand="+" ref_description="SGN-E352716 [cTOS-11-H19]">
      <seq>gatctgtcccaggcttggctaacgtcacagttttagcattacaatccaagattgcaaaatttggagaaagccaagtcatacccagaattacatcaaaatcaaccatttctaagataaccaagtctacataagtattgctccccacaaaagtcaccagaccagacctatatactttttcaactatcacagactcacccaccggagtagaaacacgaataggcatgtcaagcaattcataatttaatttaagaccagtagcaaatgaggaagatacatatgaaaatgtggatccagggtcaaataatacaaaagccatgcaatcacaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C05HBa0091D14.1" temp_strand="-" temp_description="C05HBa0091D14.1  CU457803.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0091D14 sequenced_by:sanger upload_account_name:uk">
        <position start="135370" stop="134440"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="135070" g_stop="134740" g_length="331"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="331" r_length="331" r_score="0.915"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0091D14.1" gen_strand="-" ref_id="SGN-E352716" ref_strand="+">
        <total_alignment_score>0.915</total_alignment_score>
        <cumulative_length_of_scored_exons>331</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0091D14.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-E352716" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="135070" e_stop="134740"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GATCTATCCCAGGCTTGGCCAACGTTACAGTTTTAGCATTACAATCTAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCTAAAATTACATCGAAATCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCTCCACAAAAGTTACAAGACAAGACCTATACAACTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCAGTAACAAATGAGGAAGATACATATGAAAATGTGTAGCCAGGATCAAATAATACAGAAGCCATGAAATCACCAACCAA</genome_strand>
        <mrna_strand>GATCTGTCCCAGGCTTGGCTAACGTCACAGTTTTAGCATTACAATCCAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCCAGAATTACATCAAAATCAACCATTTCTAAGATAACCAAGTCTACATAAGTATTGCTCCCCACAAAAGTCACCAGACCAGACCTATATACTTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGCAATTCATAATTTAATTTAAGACCAGTAGCAAATGAGGAAGATACATATGAAAATGTGGATCCAGGGTCAAATAATACAAAAGCCATGCAATCACAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_E_tomato_potato" ref_id="SGN-E352117" ref_strand="+" ref_description="SGN-E352117 [cTOS-13-N24]">
      <seq>tttgatcctgcctccacattttcatatgtatcttcctcatttgctactgttcttaatttacatagtgaatcgcttgacatacctattcgtgttctactccggtgggtgagtctgtgattgttgaaaaggtgtataggtcttgtcttgtgacatttgtgggagcaatactcatgtagacttggttatcctataaatggttgacttcgatgtaattctgggtatgacttggctgtctccaaattttgcaatcttggattgtaatgctaaaactgtaacgttggccaagcctgagatagatgcgttagtgtgggagggtgactacacttccactccagttcgtatcatctcctttctttgtgctaagagaatggttagtaaagggtgtttagctttcttggcacacctcagggatgatactacccaagtaccttcaattgagtcagtttcgatagtccgtgagtttctggatgtgtttcctgcagaccttcctggtatgccaccggatagggatattgacttttgcattgatctggagccgggtgatcaccccatttccatacccccttatagaatggctcccgctgagttgggggagttaaaggcccaacttcaagagttgttangtaagggcttcattangccaagtgcatccccttggg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0091D14-YObnU/GenomeThreader_SGN_E_tomato_potato/un_xed_seqs" temp_id="C05HBa0091D14.1" temp_strand="+" temp_description="C05HBa0091D14.1  CU457803.4 htgs_phase:3 submitted_to_sgn_as:C04HBa0091D14 sequenced_by:sanger upload_account_name:uk">
        <position start="134470" stop="135730"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="134770" g_stop="135430" g_length="661"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="659" r_length="659" r_score="0.929"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0091D14.1" gen_strand="+" ref_id="SGN-E352117" ref_strand="+">
        <total_alignment_score>0.929</total_alignment_score>
        <cumulative_length_of_scored_exons>661</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0091D14.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-E352117" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="134770" e_stop="135430"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTGATCCTGGCTACACATTTTCATATGTATCTTCCTCATTTGTTACTGGTCTTAATTTACATTGTGAATTACTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGTTGTATAGGTCTTGTCTTGTAACTTTTGTGGAGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGATTTCGATGTAATTTTAGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGGGATAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTTGCACACCTCAGGGATGATACTATCCAAATACCTACAATTGAGTCAGTTTCGATAGTCTGTGAGTTCCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAGATATTGATTTCTGTATTGATATGGAGCCGGGTACTCGCCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCCGAGTTAAGAGAGTTAACGGCCCAACTTCAAGAGTTGTTAGGTAAAGGCTTCATTAGACCAAGTGCATCCCCTTGGG</genome_strand>
        <mrna_strand>TTTGATCCTGCCTCCACATTTTCATATGTATCTTCCTCATTTGCTACTGTTCTTAATTTACATAGTGAATCGCTTGACATACCTATTCGTG-TTCTACTCCGGTGGGTGAGTCTGTGATTGTTGAAAAGGTGTATAGGTCTTGTCTTGTGACATTTGTGG-GAGCAATACTCATGTAGACTTGGTTATCCTATAAATGGTTGACTTCGATGTAATTCTGGGTATGACTTGGCTGTCTCCAAATTTTGCAATCTTGGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGAGATAGATGCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTTGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTGGCACACCTCAGGGATGATACTACCCAAGTACCTTCAATTGAGTCAGTTTCGATAGTCCGTGAGTTTCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGGGATATTGACTTTTGCATTGATCTGGAGCCGGGTGATCACCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCTGAGTTGGGGGAGTTAAAGGCCCAACTTCAAGAGTTGTTANGTAAGGGCTTCATTANGCCAAGTGCATCCCCTTGGG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>4</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="121854" PGL_stop="122297"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="121854" e_stop="122297"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.912"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.912">
            <gDNA_exon_boundary e_start="121854" e_stop="122297" e_length="444"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="121854" stop="122297"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E243215" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTATTGTAGATGACCATATTTTTTCTTCGAATAAGAAATTAAATTACAATACACACAAAAAAAATAGTTTAATTTTTTTATTCTTTAAACTAAGGAATGAAATAAAAAAAATAAGAATAAGAAATTCAAATAATTATAATAAAAGAAGTCAAAAAATAATTTATGTATGAAAAAAATTAAAATATACCTTGAACTTTGATAGAAGAATCATATATACCCCTAAATAATTTTTTTTAAAAAAAATTAGAAGTAATAAATATAAATTTAAAACTAATTTTTTAACTTCCGTAAAATGAAGGGTATATGTGAGCCATTTTGTAACGGCAGAGCTATATATGAGCCGTTTGTATAACGGTAAGGGCATATATGAGAGCCACTTTTCTAACGAGGGGTATATCAGCTCCAAATGACAAAGTTGAATGGTATATCAGACCCTTTTCCCTA</gDNA_template>
            <first_frame> L  L  *  M  T  I  F  F  L  R  I  R  N  *  I  T  I  H  T  K  K  I  V  *  F  F  Y  S  L  N  *  G  M  K  *  K  K  *  E  *  E  I  Q  I  I  I  I  K  E  V  K  K  *  F  M  Y  E  K  N  *  N  I  P  *  T  L  I  E  E  S  Y  I  P  L  N  N  F  F  *  K  K  L  E  V  I  N  I  N  L  K  L  I  F  *  L  P  *  N  E  G  Y  M  *  A  I  L  *  R  Q  S  Y  I  *  A  V  C  I  T  V  R  A  Y  M  R  A  T  F  L  T  R  G  I  S  A  P  N  D  K  V  E  W  Y  I  R  P  F  S  L </first_frame>
            <second_frame>  Y  C  R  *  P  Y  F  F  F  E  *  E  I  K  L  Q  Y  T  Q  K  K  *  F  N  F  F  I  L  *  T  K  E  *  N  K  K  N  K  N  K  K  F  K  *  L  *  *  K  K  S  K  N  N  L  C  M  K  K  I  K  I  Y  L  E  L  *  *  K  N  H  I  Y  P  *  I  I  F  F  K  K  N  *  K  *  *  I  *  I  *  N  *  F  F  N  F  R  K  M  K  G  I  C  E  P  F  C  N  G  R  A  I  Y  E  P  F  V  *  R  *  G  H  I  *  E  P  L  F  *  R  G  V  Y  Q  L  Q  M  T  K  L  N  G  I  S  D  P  F  P   </second_frame>
            <third_frame>   I  V  D  D  H  I  F  S  S  N  K  K  L  N  Y  N  T  H  K  K  N  S  L  I  F  L  F  F  K  L  R  N  E  I  K  K  I  R  I  R  N  S  N  N  Y  N  K  R  S  Q  K  I  I  Y  V  *  K  K  L  K  Y  T  L  N  F  D  R  R  I  I  Y  T  P  K  *  F  F  L  K  K  I  R  S  N  K  Y  K  F  K  T  N  F  L  T  S  V  K  *  R  V  Y  V  S  H  F  V  T  A  E  L  Y  M  S  R  L  Y  N  G  K  G  I  Y  E  S  H  F  S  N  E  G  Y  I  S  S  K  *  Q  S  *  M  V  Y  Q  T  L  F  P  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C05HBa0091D14.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="+" PGL_start="133506" PGL_stop="134160"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="133506" e_stop="134160"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.919"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.919">
            <gDNA_exon_boundary e_start="133506" e_stop="134160" e_length="655"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="133506" stop="134160"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E728374" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGATGATTAATCAGGTTCTTGCTTATCTTAGCGGGTTATCTGATCAGGGCAAGACACCTCTAGTGTTTTCTGCACCAGCACCTCAGCTTTCGGGAGTACAACATGCAGCTGTTGTGGCTCCCCGCATGGATGCCTCATTGGAAATAGGCATGTTTCCTCGATTGACTACAGGGCCTATAATGACGAGTGATCAGCACGAACTTTTCACTAAGTTCTTGAAATTGAAACCTCCAGTTTTCAAGGGTGCTGAATCTGAGGATGCCTATGATTTTCTGGTTGATTATCATGAGCTGCTACATAAGATGGGCATAGTGGAACGATTCGGTGTTGAGTTCGTAACCTATCAGTTTCAGGGAAATGCCAAAATGTGGTGGCGATCGTATGTTGAGTGTCAACCAGCACAGGCACCAGCCATGACTTGGGCATCATTCTCTAGCTTATTTATGGAGAAGTATATACCCGGACTTTCAGGGATAGGAAGAGAGATGAGTTCCTGAGCCTAGAGCAAGGCATGATGTCGGTTACTGCTTATGAGGCTAAGTTTCGTGCATTATCCAGGTATGCCACCCAGCTTTGCTTCAGTCCACAAGAGCAGATTCGCCGTTTTGTGAAGGGATTGAGGTCAGACTTGCAGATTCCAGCCTTACAGGTAGCT</gDNA_template>
            <first_frame> R  *  L  I  R  F  L  L  I  L  A  G  Y  L  I  R  A  R  H  L  *  C  F  L  H  Q  H  L  S  F  R  E  Y  N  M  Q  L  L  W  L  P  A  W  M  P  H  W  K  *  A  C  F  L  D  *  L  Q  G  L  *  *  R  V  I  S  T  N  F  S  L  S  S  *  N  *  N  L  Q  F  S  R  V  L  N  L  R  M  P  M  I  F  W  L  I  I  M  S  C  Y  I  R  W  A  *  W  N  D  S  V  L  S  S  *  P  I  S  F  R  E  M  P  K  C  G  G  D  R  M  L  S  V  N  Q  H  R  H  Q  P  *  L  G  H  H  S  L  A  Y  L  W  R  S  I  Y  P  D  F  Q  G  *  E  E  R  *  V  P  E  P  R  A  R  H  D  V  G  Y  C  L  *  G  *  V  S  C  I  I  Q  V  C  H  P  A  L  L  Q  S  T  R  A  D  S  P  F  C  E  G  I  E  V  R  L  A  D  S  S  L  T  G  S  </first_frame>
            <second_frame>  D  D  *  S  G  S  C  L  S  *  R  V  I  *  S  G  Q  D  T  S  S  V  F  C  T  S  T  S  A  F  G  S  T  T  C  S  C  C  G  S  P  H  G  C  L  I  G  N  R  H  V  S  S  I  D  Y  R  A  Y  N  D  E  *  S  A  R  T  F  H  *  V  L  E  I  E  T  S  S  F  Q  G  C  *  I  *  G  C  L  *  F  S  G  *  L  S  *  A  A  T  *  D  G  H  S  G  T  I  R  C  *  V  R  N  L  S  V  S  G  K  C  Q  N  V  V  A  I  V  C  *  V  S  T  S  T  G  T  S  H  D  L  G  I  I  L  *  L  I  Y  G  E  V  Y  T  R  T  F  R  D  R  K  R  D  E  F  L  S  L  E  Q  G  M  M  S  V  T  A  Y  E  A  K  F  R  A  L  S  R  Y  A  T  Q  L  C  F  S  P  Q  E  Q  I  R  R  F  V  K  G  L  R  S  D  L  Q  I  P  A  L  Q  V  A </second_frame>
            <third_frame>   M  I  N  Q  V  L  A  Y  L  S  G  L  S  D  Q  G  K  T  P  L  V  F  S  A  P  A  P  Q  L  S  G  V  Q  H  A  A  V  V  A  P  R  M  D  A  S  L  E  I  G  M  F  P  R  L  T  T  G  P  I  M  T  S  D  Q  H  E  L  F  T  K  F  L  K  L  K  P  P  V  F  K  G  A  E  S  E  D  A  Y  D  F  L  V  D  Y  H  E  L  L  H  K  M  G  I  V  E  R  F  G  V  E  F  V  T  Y  Q  F  Q  G  N  A  K  M  W  W  R  S  Y  V  E  C  Q  P  A  Q  A  P  A  M  T  W  A  S  F  S  S  L  F  M  E  K  Y  I  P  G  L  S  G  I  G  R  E  M  S  S  *  A  *  S  K  A  *  C  R  L  L  L  M  R  L  S  F  V  H  Y  P  G  M  P  P  S  F  A  S  V  H  K  S  R  F  A  V  L  *  R  D  *  G  Q  T  C  R  F  Q  P  Y  R  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0091D14.1" strand="+"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="133508" stop="134002"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>492</number_coding_nucleotides>
                  <number_encoded_amino_acids>164</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>MINQVLAYLSGLSDQGKTPLVFSAPAPQLSGVQHAAVVAPRMDASLEIGMFPRLTTGPIMTSDQHELFTKFLKLKPPVFKGAESEDAYDFLVDYHELLHKMGIVERFGVEFVTYQFQGNAKMWWRSYVECQPAQAPAMTWASFSSLFMEKYIPGLSGIGREMSS*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="-" PGL_start="135070" PGL_stop="134740"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="135070" e_stop="134740"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.915"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.915">
            <gDNA_exon_boundary e_start="135070" e_stop="134740" e_length="331"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="135070" stop="134740"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352716" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GATCTATCCCAGGCTTGGCCAACGTTACAGTTTTAGCATTACAATCTAAGATTGCAAAATTTGGAGAAAGCCAAGTCATACCTAAAATTACATCGAAATCAACCATTTCTAAGATAACCAAGTCTACATGAGTATTGCTCTCCACAAAAGTTACAAGACAAGACCTATACAACTTTTCAACTATCACAGACTCACCCACCGGAGTAGAAACACGAATAGGCATGTCAAGTAATTCACAATGTAAATTAAGACCAGTAACAAATGAGGAAGATACATATGAAAATGTGTAGCCAGGATCAAATAATACAGAAGCCATGAAATCACCAACCAA</gDNA_template>
            <first_frame> D  L  S  Q  A  W  P  T  L  Q  F  *  H  Y  N  L  R  L  Q  N  L  E  K  A  K  S  Y  L  K  L  H  R  N  Q  P  F  L  R  *  P  S  L  H  E  Y  C  S  P  Q  K  L  Q  D  K  T  Y  T  T  F  Q  L  S  Q  T  H  P  P  E  *  K  H  E  *  A  C  Q  V  I  H  N  V  N  *  D  Q  *  Q  M  R  K  I  H  M  K  M  C  S  Q  D  Q  I  I  Q  K  P  *  N  H  Q  P  </first_frame>
            <second_frame>  I  Y  P  R  L  G  Q  R  Y  S  F  S  I  T  I  *  D  C  K  I  W  R  K  P  S  H  T  *  N  Y  I  E  I  N  H  F  *  D  N  Q  V  Y  M  S  I  A  L  H  K  S  Y  K  T  R  P  I  Q  L  F  N  Y  H  R  L  T  H  R  S  R  N  T  N  R  H  V  K  *  F  T  M  *  I  K  T  S  N  K  *  G  R  Y  I  *  K  C  V  A  R  I  K  *  Y  R  S  H  E  I  T  N  Q </second_frame>
            <third_frame>   S  I  P  G  L  A  N  V  T  V  L  A  L  Q  S  K  I  A  K  F  G  E  S  Q  V  I  P  K  I  T  S  K  S  T  I  S  K  I  T  K  S  T  *  V  L  L  S  T  K  V  T  R  Q  D  L  Y  N  F  S  T  I  T  D  S  P  T  G  V  E  T  R  I  G  M  S  S  N  S  Q  C  K  L  R  P  V  T  N  E  E  D  T  Y  E  N  V  *  P  G  S  N  N  T  E  A  M  K  S  P  T   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C05HBa0091D14.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="134770" PGL_stop="135430"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="134770" e_stop="135430"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.929"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.929">
            <gDNA_exon_boundary e_start="134770" e_stop="135430" e_length="661"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="134770" stop="135430"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-E352117" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTGATCCTGGCTACACATTTTCATATGTATCTTCCTCATTTGTTACTGGTCTTAATTTACATTGTGAATTACTTGACATGCCTATTCGTGTTTCTACTCCGGTGGGTGAGTCTGTGATAGTTGAAAAGTTGTATAGGTCTTGTCTTGTAACTTTTGTGGAGAGCAATACTCATGTAGACTTGGTTATCTTAGAAATGGTTGATTTCGATGTAATTTTAGGTATGACTTGGCTTTCTCCAAATTTTGCAATCTTAGATTGTAATGCTAAAACTGTAACGTTGGCCAAGCCTGGGATAGATCCGTTAGTGTGGGAGGGTGACTACACTTCCACTCCAGTTCGTATCATCTCCTTTCTTCGTGCTAAGAGAATGGTTAGTAAAGGGTGTTTAGCTTTCTTTGCACACCTCAGGGATGATACTATCCAAATACCTACAATTGAGTCAGTTTCGATAGTCTGTGAGTTCCTGGATGTGTTTCCTGCAGACCTTCCTGGTATGCCACCGGATAGAGATATTGATTTCTGTATTGATATGGAGCCGGGTACTCGCCCCATTTCCATACCCCCTTATAGAATGGCTCCCGCCGAGTTAAGAGAGTTAACGGCCCAACTTCAAGAGTTGTTAGGTAAAGGCTTCATTAGACCAAGTGCATCCCCTTGGG</gDNA_template>
            <first_frame> F  D  P  G  Y  T  F  S  Y  V  S  S  S  F  V  T  G  L  N  L  H  C  E  L  L  D  M  P  I  R  V  S  T  P  V  G  E  S  V  I  V  E  K  L  Y  R  S  C  L  V  T  F  V  E  S  N  T  H  V  D  L  V  I  L  E  M  V  D  F  D  V  I  L  G  M  T  W  L  S  P  N  F  A  I  L  D  C  N  A  K  T  V  T  L  A  K  P  G  I  D  P  L  V  W  E  G  D  Y  T  S  T  P  V  R  I  I  S  F  L  R  A  K  R  M  V  S  K  G  C  L  A  F  F  A  H  L  R  D  D  T  I  Q  I  P  T  I  E  S  V  S  I  V  C  E  F  L  D  V  F  P  A  D  L  P  G  M  P  P  D  R  D  I  D  F  C  I  D  M  E  P  G  T  R  P  I  S  I  P  P  Y  R  M  A  P  A  E  L  R  E  L  T  A  Q  L  Q  E  L  L  G  K  G  F  I  R  P  S  A  S  P  W  </first_frame>
            <second_frame>  L  I  L  A  T  H  F  H  M  Y  L  P  H  L  L  L  V  L  I  Y  I  V  N  Y  L  T  C  L  F  V  F  L  L  R  W  V  S  L  *  *  L  K  S  C  I  G  L  V  L  *  L  L  W  R  A  I  L  M  *  T  W  L  S  *  K  W  L  I  S  M  *  F  *  V  *  L  G  F  L  Q  I  L  Q  S  *  I  V  M  L  K  L  *  R  W  P  S  L  G  *  I  R  *  C  G  R  V  T  T  L  P  L  Q  F  V  S  S  P  F  F  V  L  R  E  W  L  V  K  G  V  *  L  S  L  H  T  S  G  M  I  L  S  K  Y  L  Q  L  S  Q  F  R  *  S  V  S  S  W  M  C  F  L  Q  T  F  L  V  C  H  R  I  E  I  L  I  S  V  L  I  W  S  R  V  L  A  P  F  P  Y  P  L  I  E  W  L  P  P  S  *  E  S  *  R  P  N  F  K  S  C  *  V  K  A  S  L  D  Q  V  H  P  L  G </second_frame>
            <third_frame>   *  S  W  L  H  I  F  I  C  I  F  L  I  C  Y  W  S  *  F  T  L  *  I  T  *  H  A  Y  S  C  F  Y  S  G  G  *  V  C  D  S  *  K  V  V  *  V  L  S  C  N  F  C  G  E  Q  Y  S  C  R  L  G  Y  L  R  N  G  *  F  R  C  N  F  R  Y  D  L  A  F  S  K  F  C  N  L  R  L  *  C  *  N  C  N  V  G  Q  A  W  D  R  S  V  S  V  G  G  *  L  H  F  H  S  S  S  Y  H  L  L  S  S  C  *  E  N  G  *  *  R  V  F  S  F  L  C  T  P  Q  G  *  Y  Y  P  N  T  Y  N  *  V  S  F  D  S  L  *  V  P  G  C  V  S  C  R  P  S  W  Y  A  T  G  *  R  Y  *  F  L  Y  *  Y  G  A  G  Y  S  P  H  F  H  T  P  L  *  N  G  S  R  R  V  K  R  V  N  G  P  T  S  R  V  V  R  *  R  L  H  *  T  K  C  I  P  L   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0091D14.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="134770" stop="135429"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>660</number_coding_nucleotides>
                  <number_encoded_amino_acids>220</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FDPGYTFSYVSSSFVTGLNLHCELLDMPIRVSTPVGESVIVEKLYRSCLVTFVESNTHVDLVILEMVDFDVILGMTWLSPNFAILDCNAKTVTLAKPGIDPLVWEGDYTSTPVRIISFLRAKRMVSKGCLAFFAHLRDDTIQIPTIESVSIVCEFLDVFPADLPGMPPDRDIDFCIDMEPGTRPISIPPYRMAPAELRELTAQLQELLGKGFIRPSASPW</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 129 chains have been computed
$ 
$ memory statistics:
$ 8672 bytes spliced alignments in total
$ 4 spliced alignments have been stored
$ 2168 bytes was the average size of a spliced alignment
$ 9056 bytes predicted gene locations in total
$ 4 predicted gene locations have been stored
$ 2264 bytes was the average size of a predicted gene location
$ 1 megabytes was the average size of the backtrace matrix
$ 152 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 02:41:44
-->
