<?xml version="1.0" encoding="ISO-8859-1"?>
<GTH_output xmlns="http://www.genomethreader.org/GTH_output/" GTH_XML_version="1.1">
  <header xmlns="http://www.genomethreader.org/GTH_output/header/">
    <source program="GenomeThreader" version="0.9.54" build_date="2006-07-28 11:55:15" run_date="2009-01-16 00:02:35"/>
    <gDNA_template_files>
      <temp_name>/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs</temp_name>
    </gDNA_template_files>
    <reference_files>
      <file ref_name="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" type="ESTcDNA"/>
    </reference_files>
    <splice_site_parameters parameter_type="Bayesian" species="arabidopsis"/>
    <parameters>
      <parameter name="bssmfile" value="arabidopsis"/>
      <parameter name="scorematrixfile" value="BLOSUM62"/>
      <parameter name="searchmode" value="forward=True,reverse=True)"/>
      <parameter name="translationtable" value="1"/>
      <parameter name="frompos" value="0"/>
      <parameter name="topos" value="0"/>
      <parameter name="width" value="0"/>
      <parameter name="verbose" value="False"/>
      <parameter name="skipalignmentout" value="False"/>
      <parameter name="showintronmaxlen" value="120"/>
      <parameter name="minorflen" value="64"/>
      <parameter name="showseqnums" value="False"/>
      <parameter name="gs2out" value="False"/>
      <parameter name="maskpolyatails" value="False"/>
      <parameter name="noautoindex" value="False"/>
      <parameter name="minmatchlen" value="20"/>
      <parameter name="seedlength" value="16"/>
      <parameter name="exdrop" value="2"/>
      <parameter name="online" value="False"/>
      <parameter name="inverse" value="False"/>
      <parameter name="exact" value="False"/>
      <parameter name="chainwf" value="0.500000"/>
      <parameter name="gcmaxgapwidth" value="1000000"/>
      <parameter name="gcmincoverage" value="50"/>
      <parameter name="introncutout" value="False"/>
      <parameter name="autointroncutout" value="0"/>
      <parameter name="icinitialdelta" value="50"/>
      <parameter name="iciterations" value="2"/>
      <parameter name="icdeltaincrease" value="50"/>
      <parameter name="icminremintronlen" value="10"/>
      <parameter name="nou12intronmodel" value="False"/>
      <parameter name="u12donorprob" value="0.990000"/>
      <parameter name="u12donorprob1mism" value="0.900000"/>
      <parameter name="probies" value="0.500000"/>
      <parameter name="probdelgen" value="0.030000"/>
      <parameter name="identityweight" value="2.000000"/>
      <parameter name="mismatchweight" value="-2.000000"/>
      <parameter name="undetcharweight" value="0.000000"/>
      <parameter name="deletionweight" value="-4.000000"/>
      <parameter name="dpminexonlen" value="5"/>
      <parameter name="dpminintronlen" value="50"/>
      <parameter name="shortexonpenal" value="100"/>
      <parameter name="shortintronpenal" value="100"/>
      <parameter name="wzerotransition" value="80"/>
      <parameter name="wdecreasedoutput" value="80"/>
      <parameter name="leadcutoffsmode" value="RELAXED"/>
      <parameter name="termcutoffsmode" value="STRICT"/>
      <parameter name="cutoffsminexonlen" value="5"/>
      <parameter name="scoreminexonlen" value="50"/>
      <parameter name="minaveragessp" value="0.500000"/>
      <parameter name="minalignmentscore" value="0.900000"/>
      <parameter name="maxalignmentscore" value="1.000000"/>
      <parameter name="mincoverage" value="0.900000"/>
      <parameter name="maxcoverage" value="100.000000"/>
      <parameter name="intermediate" value="False"/>
      <parameter name="sortags" value="False"/>
      <parameter name="sortagswf" value="1.000000"/>
      <parameter name="first" value="0"/>
      <parameter name="exondistri" value="False"/>
      <parameter name="introndistri" value="False"/>
      <parameter name="refseqcovdistri" value="False"/>
    </parameters>
    <overall_reference_type>ESTcDNA</overall_reference_type>
  </header>
  <alignment_module>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313502" ref_strand="+" ref_description="SGN-U313502        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr3:5481331-5485100 REVERSE | Aliases: MSL1.22(evalue: 3e-81, score=298) genbank/nr: gi|20466248|gb|AAM20441.1| putative transport protein [Arabidopsis thaliana](evalue: 2e-79, score=298)">
      <seq>gaaaaaaatgggcaaaaacactgaacaagaagaagagtttttattgaatcactcacaaaattcaacaaagggaggtttaaaaaccattcctttcatcatagtgaatgaatcatgtgagagattggcaagttttggtttgcaaccaaatatgataatctacataacaaaattttacaacattaatgctgctcatgcttcagttttgattaatttatggtcagcagtttcaaatgtattgtctattttgggagcttttatttctgattcttacattggaaggtttagggctgtggctattggaaccatctctagcctaataggaatgcttgttctttggctcacaacaatatttccacaactcaggccgttaccctgcggtcagtatcaacatgattgtaatggaacaacagcagcacaacttgctgcaattttgtgttcttttgggcttatttccattggtgctggttttgttagaccttgttccattgcattgggtgcagaccaattgggtaacaaagaaaatctagataatgagagacttctggatagctatttcagttggttctatgcaagtgtcggagtttcaattgttcttgcagttactgtaattgtttatatccaagatcattttggttggcaagttgggtttggtgtccctgctttgctcatggttttatctgtttccgttttcttggttggatctcctcattatatcaaagcaaagcctgaaggtagtttgttcactggattgtttcaagtagcagtcgcagccttcagaaaaagacatatcaacgttcaattgaattataatgacgactcctactataaagcacctgaatcaaagctcctcgaaccatccactgacttcaggtgtttgaatagagcttgcataattgaagatcctaacatggagttgaaacctgatggaaaagcttcagatccatggagtctctgctctgtggaacaagtcaaataatgaagtgttttctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="2348" stop="4185"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="2654" g_stop="2726" g_length="73"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="101" r_length="73" r_score="0.973"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="2727" i_stop="2812" i_length="86">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="2813" g_stop="3030" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="319" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="3031" i_stop="3132" i_length="102">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="0.98"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="3133" g_stop="3683" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="870" r_length="551" r_score="0.960"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="3684" i_stop="3763" i_length="80">
            <donor d_prob="0.997" d_score="0.96"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="3764" g_stop="3885" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="871" r_stop="991" r_length="121" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U313502" ref_strand="+">
        <total_alignment_score>0.974</total_alignment_score>
        <cumulative_length_of_scored_exons>964</cumulative_length_of_scored_exons>
        <coverage percentage="0.973" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="2654" e_stop="2726"/>
          <exon e_start="2813" e_stop="3030"/>
          <exon e_start="3133" e_stop="3683"/>
          <exon e_start="3764" e_stop="3885"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAGAATTTTTATTGAATCACTCACAAAATTCAACAAAGGGAGGTTTAAAAACCATTCCTTTCATCATAGGTATGTGTAAATTGTAACAATTTTGTCTTCTCACTTTACTCTTTGTTTGTAATTTTGTTTAATTGATTCATTGTGTTGCATTGTAGTGAATGAATCATGTGAGAGATTGGCAAGTTTTGGTTTGCAACCAAATATGATAATCTACATAACAAAATTTTACAACATTAATGCTGCTCATGCTTCAGTTTTGATTAATTTATGGTCAGCAGTTTCAAATGTATTGTCTATTTTGGGAGCTTTTATTTCTGATTCTTACATTGGAAGGTTTAGGGCTGTGGCTATTGGAACCATCTCTAGCCTAATAGTAAGTTTAATTTGCCCTGTTTTTTTAATTCTTGTAAAGATTAGAAACTTGACATATTCAAAACTCTCTTGTGTTATACAACTTTATTCTTTTGGCCTACAGGGAATGCTTGTTCTTTGGCTCACAACAATTTTTCCACAACTCAGGCCGTTACCCTGCGGTCAGTATCAACATGATTGTAATGGAACAACAGCAGCACAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGTGCTGGTCTTGTTAGACCTTGTTCCATAGCATTGGGTGCCGACCAATTGGAGAACAAAGAAAATCCAGATAACGAGAGACTTATGGATAGCTATTTCAATTGGTTCTATGCCAGTATCGGAGTTGCAATTGTTTTTGCAGTTACTGTAATTGTTTATATCCAAGACCATTTTGGTTGGCAAGTTGGGTTTGGTGTTCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTTCTTGATTGGATCTCCTCATTATATCAAAGCAAAACCTAAAGGGAGTTTGTTCACTGGATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAACGTTCAATTGAATTATAATGACGACTCCTACTATAAAACACCTGAATCAAAGCTCCTCGAACCATCCACGGACTTCAGGTATATGTGTCTCCATCTTTTCCTCAATGGTATAGACATCATCAATATCTATTCGTGATTCATTGTATATTATATTATAGGTGTTTGAATAGAGCTTGCATAATTGAAGATCCTAACATGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCATGGAGTCTCTGCTCTGTGGAACAAGTCAAAATAATGAAGTGTTTTCTTA</genome_strand>
        <mrna_strand>GAAGAAGAGTTTTTATTGAATCACTCACAAAATTCAACAAAGGGAGGTTTAAAAACCATTCCTTTCATCATAG......................................................................................TGAATGAATCATGTGAGAGATTGGCAAGTTTTGGTTTGCAACCAAATATGATAATCTACATAACAAAATTTTACAACATTAATGCTGCTCATGCTTCAGTTTTGATTAATTTATGGTCAGCAGTTTCAAATGTATTGTCTATTTTGGGAGCTTTTATTTCTGATTCTTACATTGGAAGGTTTAGGGCTGTGGCTATTGGAACCATCTCTAGCCTAATA......................................................................................................GGAATGCTTGTTCTTTGGCTCACAACAATATTTCCACAACTCAGGCCGTTACCCTGCGGTCAGTATCAACATGATTGTAATGGAACAACAGCAGCACAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGTGCTGGTTTTGTTAGACCTTGTTCCATTGCATTGGGTGCAGACCAATTGGGTAACAAAGAAAATCTAGATAATGAGAGACTTCTGGATAGCTATTTCAGTTGGTTCTATGCAAGTGTCGGAGTTTCAATTGTTCTTGCAGTTACTGTAATTGTTTATATCCAAGATCATTTTGGTTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTTCTTGGTTGGATCTCCTCATTATATCAAAGCAAAGCCTGAAGGTAGTTTGTTCACTGGATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAACGTTCAATTGAATTATAATGACGACTCCTACTATAAAGCACCTGAATCAAAGCTCCTCGAACCATCCACTGACTTCAG................................................................................GTGTTTGAATAGAGCTTGCATAATTGAAGATCCTAACATGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCATGGAGTCTCTGCTCTGTGGAACAAGTC-AAATAATGAAGTGTTTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334412" ref_strand="+" ref_description="SGN-U334412        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr3:5481331-5485100 REVERSE | Aliases: MSL1.22(evalue: 2e-37, score=153) genbank/nr: gi|20466248|gb|AAM20441.1| putative transport protein [Arabidopsis thaliana](evalue: 1e-35, score=153)">
      <seq>tgcggtcaatattaacatgattgctatggaacaacagcagcgcaacttgctgcaattttgtgttcttttgggcttatttccattggcgctggatttgttagaccttgttccattgcattgggtgcagaccaattgggtaacaaagaaaatctagataatgagagacttctggatagctatttcagttggttctatgcaagtgtcggagtttcaattgttcttgcaggtactgtaattgtttatatccaagatcattttggctggcaagttgggtttggtgtccctgctttgctcatgggtctatctgtttccgttatcttggttggatctcctcattatatgaaagcaaagcctgaaggtagtttgttcactggattgtttcaagtagcaggcgctgtcttcagaaaaagacaggtcaacgttcaattgaattatggtgacgactcctacctataaagcaccctgaatcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="2887" stop="3957"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="3187" g_stop="3657" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="0.907"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U334412" ref_strand="+">
        <total_alignment_score>0.907</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U334412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="3187" e_stop="3657"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGGTCAGTATCAACATGATTGTAATGGAACAACAGCAGCACAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGTGCTGGTCTTGTTAGACCTTGTTCCATAGCATTGGGTGCCGACCAATTGGAGAACAAAGAAAATCCAGATAACGAGAGACTTATGGATAGCTATTTCAATTGGTTCTATGCCAGTATCGGAGTTGCAATTGTTTTTGCAGTTACTGTAATTGTTTATATCCAAGACCATTTTGGTTGGCAAGTTGGGTTTGGTGTTCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTTCTTGATTGGATCTCCTCATTATATCAAAGCAAAACCTAAAGGGAGTTTGTTCACTGGATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAACGTTCAATTGAATTATAATGACGACTCCTA-CTATAAAACA-CCTGAATCAAAG</genome_strand>
        <mrna_strand>TGCGGTCAATATTAACATGATTGCTATGGAACAACAGCAGCGCAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGCGCTGGATTTGTTAGACCTTGTTCCATTGCATTGGGTGCAGACCAATTGGGTAACAAAGAAAATCTAGATAATGAGAGACTTCTGGATAGCTATTTCAGTTGGTTCTATGCAAGTGTCGGAGTTTCAATTGTTCTTGCAGGTACTGTAATTGTTTATATCCAAGATCATTTTGGCTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGGTCTATCTGTTTCCGTTATCTTGGTTGGATCTCCTCATTATATGAAAGCAAAGCCTGAAGGTAGTTTGTTCACTGGATTGTTTCAAGTAGCAGGCGCTGTCTTCAGAAAAAGACAGGTCAACGTTCAATTGAATTATGGTGACGACTCCTACCTATAAAGCACCCTGAATCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313502" ref_strand="+" ref_description="SGN-U313502        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr3:5481331-5485100 REVERSE | Aliases: MSL1.22(evalue: 3e-81, score=298) genbank/nr: gi|20466248|gb|AAM20441.1| putative transport protein [Arabidopsis thaliana](evalue: 2e-79, score=298)">
      <seq>gaaaaaaatgggcaaaaacactgaacaagaagaagagtttttattgaatcactcacaaaattcaacaaagggaggtttaaaaaccattcctttcatcatagtgaatgaatcatgtgagagattggcaagttttggtttgcaaccaaatatgataatctacataacaaaattttacaacattaatgctgctcatgcttcagttttgattaatttatggtcagcagtttcaaatgtattgtctattttgggagcttttatttctgattcttacattggaaggtttagggctgtggctattggaaccatctctagcctaataggaatgcttgttctttggctcacaacaatatttccacaactcaggccgttaccctgcggtcagtatcaacatgattgtaatggaacaacagcagcacaacttgctgcaattttgtgttcttttgggcttatttccattggtgctggttttgttagaccttgttccattgcattgggtgcagaccaattgggtaacaaagaaaatctagataatgagagacttctggatagctatttcagttggttctatgcaagtgtcggagtttcaattgttcttgcagttactgtaattgtttatatccaagatcattttggttggcaagttgggtttggtgtccctgctttgctcatggttttatctgtttccgttttcttggttggatctcctcattatatcaaagcaaagcctgaaggtagtttgttcactggattgtttcaagtagcagtcgcagccttcagaaaaagacatatcaacgttcaattgaattataatgacgactcctactataaagcacctgaatcaaagctcctcgaaccatccactgacttcaggtgtttgaatagagcttgcataattgaagatcctaacatggagttgaaacctgatggaaaagcttcagatccatggagtctctgctctgtggaacaagtcaaataatgaagtgttttctta</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="-" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="8254" stop="6396"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7954" g_stop="7854" g_length="101"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="101" r_length="101" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="7853" i_stop="7769" i_length="85">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.994" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="7768" g_stop="7551" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="102" r_stop="319" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="7550" i_stop="7449" i_length="102">
            <donor d_prob="0.990" d_score="1.00"/>
            <acceptor a_prob="0.993" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="7448" g_stop="6898" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="320" r_stop="870" r_length="551" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="6897" i_stop="6818" i_length="80">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="6817" g_stop="6696" g_length="122"/>
          <reference_exon_boundary r_type="cDNA" r_start="871" r_stop="991" r_length="121" r_score="0.992"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="-" ref_id="SGN-U313502" ref_strand="+">
        <total_alignment_score>0.999</total_alignment_score>
        <cumulative_length_of_scored_exons>992</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U313502" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7954" e_stop="7854"/>
          <exon e_start="7768" e_stop="7551"/>
          <exon e_start="7448" e_stop="6898"/>
          <exon e_start="6817" e_stop="6696"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAAAAAAATGGGCAAAAACACTGAACAAGAAGAAGAGTTTTTATTGAATCACTCACAAAATTCAACAAAGGGAGGTTTAAAAACCATTCCTTTCATCATAGGTATGTGTAAATTGTAACAATTTTGTCTTCTCACTTTACTCTTTGTTTGTAATTTGTTTAATTGATTCATTGTGTTGTATTGTAGTGAATGAATCATGTGAGAGATTGGCAAGTTTTGGTTTGCAACCAAATATGATAATCTACATAACAAAATTTTACAACATTAATGCTGCTCATGCTTCAGTTTTGATTAATTTATGGTCAGCAGTTTCAAATGTATTGTCTATTTTGGGAGCTTTTATTTCTGATTCTTACATTGGAAGGTTTAGGGCTGTGGCTATTGGAACCATCTCTAGCCTAATAGTAAGTTTAATTTGCCCTGTTTTTTTAATTCTTGTAAAGATTAGAAACTTGACATATTCAAAACTCTCTTGTGTTATACAACTTTATTCTTTTGGCCTACAGGGAATGCTTGTTCTTTGGCTCACAACAATATTTCCACAACTCAGGCCGTTACCCTGCGGTCAGTATCAACATGATTGTAATGGAACAACAGCAGCACAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGTGCTGGTTTTGTTAGACCTTGTTCCATTGCATTGGGTGCAGACCAATTGGGTAACAAAGAAAATCTAGATAATGAGAGACTTCTGGATAGCTATTTCAGTTGGTTCTATGCAAGTGTCGGAGTTTCAATTGTTCTTGCAGTTACTGTAATTGTTTATATCCAAGATCATTTTGGTTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTTCTTGGTTGGATCTCCTCATTATATCAAAGCAAAGCCTGAAGGTAGTTTGTTCACTGGATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAACGTTCAATTGAATTATAATGACGACTCCTACTATAAAGCACCTGAATCAAAGCTCCTCGAACCATCCACTGACTTCAGGTATACGTGCCTCCATCTTTTCCTCAATGGTATAGACATCATCAATATCTATTCGTGATTCATTGTATATTATATTATAGGTGTTTGAATAGAGCTTGCATAATTGAAGATCCTAACATGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCATGGAGTCTCTGCTCTGTGGAACAAGTCAAAATAATGAAGTGTTTTCTTA</genome_strand>
        <mrna_strand>GAAAAAAATGGGCAAAAACACTGAACAAGAAGAAGAGTTTTTATTGAATCACTCACAAAATTCAACAAAGGGAGGTTTAAAAACCATTCCTTTCATCATAG.....................................................................................TGAATGAATCATGTGAGAGATTGGCAAGTTTTGGTTTGCAACCAAATATGATAATCTACATAACAAAATTTTACAACATTAATGCTGCTCATGCTTCAGTTTTGATTAATTTATGGTCAGCAGTTTCAAATGTATTGTCTATTTTGGGAGCTTTTATTTCTGATTCTTACATTGGAAGGTTTAGGGCTGTGGCTATTGGAACCATCTCTAGCCTAATA......................................................................................................GGAATGCTTGTTCTTTGGCTCACAACAATATTTCCACAACTCAGGCCGTTACCCTGCGGTCAGTATCAACATGATTGTAATGGAACAACAGCAGCACAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGTGCTGGTTTTGTTAGACCTTGTTCCATTGCATTGGGTGCAGACCAATTGGGTAACAAAGAAAATCTAGATAATGAGAGACTTCTGGATAGCTATTTCAGTTGGTTCTATGCAAGTGTCGGAGTTTCAATTGTTCTTGCAGTTACTGTAATTGTTTATATCCAAGATCATTTTGGTTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTTCTTGGTTGGATCTCCTCATTATATCAAAGCAAAGCCTGAAGGTAGTTTGTTCACTGGATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAACGTTCAATTGAATTATAATGACGACTCCTACTATAAAGCACCTGAATCAAAGCTCCTCGAACCATCCACTGACTTCAG................................................................................GTGTTTGAATAGAGCTTGCATAATTGAAGATCCTAACATGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCATGGAGTCTCTGCTCTGTGGAACAAGTC-AAATAATGAAGTGTTTTCTTA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U334412" ref_strand="+" ref_description="SGN-U334412        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr3:5481331-5485100 REVERSE | Aliases: MSL1.22(evalue: 2e-37, score=153) genbank/nr: gi|20466248|gb|AAM20441.1| putative transport protein [Arabidopsis thaliana](evalue: 1e-35, score=153)">
      <seq>tgcggtcaatattaacatgattgctatggaacaacagcagcgcaacttgctgcaattttgtgttcttttgggcttatttccattggcgctggatttgttagaccttgttccattgcattgggtgcagaccaattgggtaacaaagaaaatctagataatgagagacttctggatagctatttcagttggttctatgcaagtgtcggagtttcaattgttcttgcaggtactgtaattgtttatatccaagatcattttggctggcaagttgggtttggtgtccctgctttgctcatgggtctatctgtttccgttatcttggttggatctcctcattatatgaaagcaaagcctgaaggtagtttgttcactggattgtttcaagtagcaggcgctgtcttcagaaaaagacaggtcaacgttcaattgaattatggtgacgactcctacctataaagcaccctgaatcaaag</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="-" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="7694" stop="6624"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="7394" g_stop="6924" g_length="471"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="473" r_length="473" r_score="0.949"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="-" ref_id="SGN-U334412" ref_strand="+">
        <total_alignment_score>0.949</total_alignment_score>
        <cumulative_length_of_scored_exons>471</cumulative_length_of_scored_exons>
        <coverage percentage="0.996" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U334412" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="7394" e_stop="6924"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGCGGTCAGTATCAACATGATTGTAATGGAACAACAGCAGCACAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGTGCTGGTTTTGTTAGACCTTGTTCCATTGCATTGGGTGCAGACCAATTGGGTAACAAAGAAAATCTAGATAATGAGAGACTTCTGGATAGCTATTTCAGTTGGTTCTATGCAAGTGTCGGAGTTTCAATTGTTCTTGCAGTTACTGTAATTGTTTATATCCAAGATCATTTTGGTTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTTCTTGGTTGGATCTCCTCATTATATCAAAGCAAAGCCTGAAGGTAGTTTGTTCACTGGATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAACGTTCAATTGAATTATAATGACGACTCCTA-CTATAAAGCA-CCTGAATCAAAG</genome_strand>
        <mrna_strand>TGCGGTCAATATTAACATGATTGCTATGGAACAACAGCAGCGCAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGCGCTGGATTTGTTAGACCTTGTTCCATTGCATTGGGTGCAGACCAATTGGGTAACAAAGAAAATCTAGATAATGAGAGACTTCTGGATAGCTATTTCAGTTGGTTCTATGCAAGTGTCGGAGTTTCAATTGTTCTTGCAGGTACTGTAATTGTTTATATCCAAGATCATTTTGGCTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGGTCTATCTGTTTCCGTTATCTTGGTTGGATCTCCTCATTATATGAAAGCAAAGCCTGAAGGTAGTTTGTTCACTGGATTGTTTCAAGTAGCAGGCGCTGTCTTCAGAAAAAGACAGGTCAACGTTCAATTGAATTATGGTGACGACTCCTACCTATAAAGCACCCTGAATCAAAG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U313503" ref_strand="+" ref_description="SGN-U313503        Tomato 200607 #1 [15 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr1:19438192-19442640 FORWARD | Aliases: F9I5.4, F9I5_4(evalue: 2e-147, score=519) genbank/nr: gi|15218183|ref|NP_175630.1| peptide transporter -related [Arabidopsis thaliana] gi|25405532|pir||H96561 probable peptide transporter [imported] - Arabidopsis thaliana gi|6850341|gb|AAF29404.1| peptide transporter, putative [Arabidopsis thaliana](evalue: 2e-145, score=519)">
      <seq>tttttagcatgcatatacatttatttatctctcaaaaacttctctctttcttccactctctttggagttaacaaggaagaaagaaaatggggaataaaccagaagaagaagagtttttactaaatcactcacaaaattcaacaaagggtggtgtaaaaaccattcctttcattatagtgaatgaatcatgtgagagagtagcaagttttggtttgcaaccaaacatgatactctatataacaaaattttacaacatggatgctgctcgtgcttcagttttgttgaatttatggtcagcactttcaaatggattggctatttttggggcttttatttctgattcttacattggaagatttagggctattgctattggaactatctccagtctaattggaatgatacttctttggctcactacaatatttccacaactcaggccgttaccctgtggtcagtatcaacttgattgtaacgcagcaacatcaacgcaacttgctgtaattttgtgttcttttgggcttattgccattggtgctggttttgttagaccttgttcagtagcatttggtgctgatcaattagagaacaaacgaaatccagataatgagagagttatggatacctatttcaactggttttatgctagtgtaggaatttcaatctctgttgcaattactgtaattgtttatatccaagtgcagtttggttggcaagttgggtttggtgtccctgctttgctcatggttttatctgtttccgtttatttaattggatctcctctttatataaaaccaaaatctgaagggagtttgttcactggattatttcaagtagcagtcgcagccttcagaaaaagacatattaatgttcagttgaattataatgacgactgctactataaagcacctgaatcaaagctcctcgaaccatccactgacttcaggtgtttgaatagagcttgcataattgaagatcctcacgtggagttgaaacctgatggaaaagcttcagatccgtggagtctctgctttgtggaacaagtcgaaataatgaagtgttttcttagagttcttcccatgtggtccacctgtattatgcttcttgtgtcgttcggtcagccactttcgatatatcaactattgaccgtggatagacacattactcctcagtttgaaatcccagcaggatcattcggcatgattaccgttttttctttgacaatctggatggctttttacgatcgtgcagtggttcctttactgtctaggtatactggactgtcgactgggataagtccattttccagaatggggattggcttatttctgggcattgtgggtacgacactttcagctataacagaaaccatacgacgcaataaggcaatcaacgcagggtttgaggatgatccgaacgctgtgttaaacatgtcctctatgtggtttgtaccacagttggcactatacggggtggctgaggctttgaatgtggttggacagatcgagtttatatatagtctatttccaaaaaccatgtccagctttgcagcagctctttacacgtttggcctagcgcttgccggcttaattaacagtctcttggtgagcgtggtggatagtactacctcagctggaggcaacacaagttggctcgccacaaacataaacagaggtcatctagattactactgctggctaataactttcttatgtgtgattaacttcctctattttttagccgtttgtcgattcactgatcagcatcaccatgatggtaggagtagcttatttcctgatgcagaagaggaacactctgagaataggcgttttcatggtgcgtaatgtgtacgctatgtttgtgtttgaacatttgcatgtattgtaacttctcttaaatccttgacctagaataaattgagggcttctgtctttaagacagagaagacgagtgccaaaaaacctcacacatatgtcaataaaatttttagttgatgagtattatttttcttgatagctgtggttaagtagtttaaccagtaaaaatgaatggatagattatgtaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="12954" stop="16193"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="13254" g_stop="13430" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="13431" i_stop="13516" i_length="86">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.998" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="13517" g_stop="13734" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="395" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="13735" i_stop="13870" i_length="136">
            <donor d_prob="0.936" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="13871" g_stop="14421" g_length="551"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="946" r_length="551" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="14422" i_stop="14773" i_length="352">
            <donor d_prob="1.000" d_score="1.00"/>
            <acceptor a_prob="0.984" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="14774" g_stop="15892" g_length="1119"/>
          <reference_exon_boundary r_type="cDNA" r_start="947" r_stop="2065" r_length="1119" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U313503" ref_strand="+">
        <total_alignment_score>0.998</total_alignment_score>
        <cumulative_length_of_scored_exons>2065</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U313503" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="13254" e_stop="13430"/>
          <exon e_start="13517" e_stop="13734"/>
          <exon e_start="13871" e_stop="14421"/>
          <exon e_start="14774" e_stop="15892"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TTTTTAGCATGCATATACATTTATTTATCTCTCAAAAACTTCTCTCTTTCTTCCACTCTCTTTGGAGTTAACAAGGAAGAAAGAAAATGGGGAATAAACCAGAAGAAGAAGAGTTTTTACTAAATCACTCACAAAATTCAACAAAGGGTGGTGTAAAAACCATTCCTTTCATTATAGGTATATTTGTTTTCTTCTTTTGCTCTTTTCTTATTTCTTAGCTTGTTTCATTGTGTCACATAGTTTTTTTTTTTTTTTTTTTGTAGTGAATGAATCATGTGAGAGAGTAGCAAGTTTTGGTTTGCAACCAAACATGATACTCTATATAACAAAATTTTACAACATGGATGCTGCTCGTGCTTCAGTTTTGTTGAATTTATGGTCAGCACTTTCAAATGGATTGGCTATTTTTGGGGCTTTTATTTCTGATTCTTACATTGGAAGATTTAGGGCTATTGCTATTGGAACTATCTCCAGTCTAATTGTAAGTTCACTTGCACAATTTGTCGTGTTAAAATCGCAAATTTAAGATCTGATTGGGTATATGCAAACAACAATTAAATTATCACAACTTTAAGTTGTAGACTTAGTACTGTTTATTCCTTTTATCATCTCATCAGGGAATGATACTTCTTTGGCTCACTACAATATTTCCACAACTCAGGCCGTTACCCTGTGGTCAGTATCAACTTGATTGTAACGCAGCAACATCAACGCAACTTGCTGTAATTTTGTGTTCTTTTGGGCTTATTGCCATTGGTGCTGGTTTTGTTAGACCTTGTTCAGTAGCATTTGGTGCTGATCAATTAGAGAACAAACGAAATCCAGATAATGAGAGAGTTATGGATACCTATTTCAACTGGTTTTATGCTAGTGTAGGAATTTCAATCTCTGTTGCAATTACTGTAATTGTTTATATCCAAGTGCAGTTTGGTTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTATTTAATTGGATCTCCTCTTTATATAAAACCAAAATCTGAAGGGAGTTTGTTCACTGGATTATTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATTAATGTTCAGTTGAATTATAATGACGACTGCTACTATAAAGCACCTGAATCAAAGCTCCTCGAACCATCCACTGACTTCAGGTATGTAGACATCTTCAATGTCCATTCGTGTGCTTACTATTATAGAATATTTGTTTTACTGACTTGTATTACATGAAATTGTCCAATGCATTTAGTTAAGCAAATGATTAGTGTGTTTAAGGGTCTTCGTTTACCCATCTCATACTCATTTTCGTTTGGCATTTATCGAAGGAAATGAAGAGTTCAAAATAGATACTTGAAGGGTGTGTATAGTAAAATTTTTCCATGTTTGGTTGGTTTGATTTTTCGAGAAAATATTTTTCTAGATAAACAAATAAAGAAAATGTCTTTCCTGATGGAGGTAAGGGAAAACAAGTTACACTTTGATTCATTCGTTCGTTGTATATTGTAGGTGTTTGAATAGAGCTTGCATAATTGAAGATCCTCACGTGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCGTGGAGTCTCTGCTTTGTGGAACAAGTCGAAATAATGAAGTGTTTTCTTAGAGTTCTTCCCATGTGGTCCACCTGTATTATGCTTCTTGTGTCGTTCGGTCAGCCACTTTCGATATATCAACTATTGACCGTGGATAGACACATTACTCCTCAGTTTGAAATCCCAGCAGGATCATTCGGCATGATTACCGTTTTTTCTTTGACAATCTGGATGGCTTTTTACGATCGTGCAGTGGTTCCTTTACTGTCTAGGTATACTGGACTGTCGACTGGGATAAGTCCATTTTCCAGAATGGGGATTGGCTTATTTCTGGGCATTGTGGGTACGACACTTTCAGCTATAACAGAAACCATACGACGCAATAAGGCAATCAACGCAGGGTTTGAGGATGATCCGAACGCTGTGTTAAACATGTCCTCTATGTGGTTTGTACCACAGTTGGCACTATACGGGGTGGCTGAGGCTTTGAATGTGGTTGGACAGATCGAGTTTATATATAGTCTATTTCCAAAAACCATGTCCAGCTTTGCAGCAGCTCTTTACACGTTTGGCCTAGCGCTTGCCGGCTTAATTAACAGTCTCTTGGTGAGCGTGGTGGATAGTACTACCTCAGCTGGAGGCAACACAAGTTGGCTCGCCACAAACATAAACAGAGGTCATCTAGATTACTACTGCTGGCTAATAACTTTCTTATGTGTGATTAACTTCCTCTATTTTTTAGCCGTTTGTCGATTCACTGATCAGCATCACCATGATGGTAGGAGTAGCTTATTTCCTGATGCAGAAGAGGAACACTCTGAGAATAGGCGTTTTCATGGTGCGTAATGTGTACGCTATGTTTGTGTTTGAACATTTGCATGTATTGTAACTTCTCTTAAATCCTTGACCTAGAATAAATTGAGGGCTTCTGTCTTTAAGACAGAGAAGACGAGTGCCAAAAAACCTCACACATATGTCAATAAAATTTTTAGTTGATGAGTATTATTTTTCTTGATAGCTGTGTTAAGTTAGTTTAACAAGTAAAAATGAATGGATAGATTATGTAA</genome_strand>
        <mrna_strand>TTTTTAGCATGCATATACATTTATTTATCTCTCAAAAACTTCTCTCTTTCTTCCACTCTCTTTGGAGTTAACAAGGAAGAAAGAAAATGGGGAATAAACCAGAAGAAGAAGAGTTTTTACTAAATCACTCACAAAATTCAACAAAGGGTGGTGTAAAAACCATTCCTTTCATTATAG......................................................................................TGAATGAATCATGTGAGAGAGTAGCAAGTTTTGGTTTGCAACCAAACATGATACTCTATATAACAAAATTTTACAACATGGATGCTGCTCGTGCTTCAGTTTTGTTGAATTTATGGTCAGCACTTTCAAATGGATTGGCTATTTTTGGGGCTTTTATTTCTGATTCTTACATTGGAAGATTTAGGGCTATTGCTATTGGAACTATCTCCAGTCTAATT........................................................................................................................................GGAATGATACTTCTTTGGCTCACTACAATATTTCCACAACTCAGGCCGTTACCCTGTGGTCAGTATCAACTTGATTGTAACGCAGCAACATCAACGCAACTTGCTGTAATTTTGTGTTCTTTTGGGCTTATTGCCATTGGTGCTGGTTTTGTTAGACCTTGTTCAGTAGCATTTGGTGCTGATCAATTAGAGAACAAACGAAATCCAGATAATGAGAGAGTTATGGATACCTATTTCAACTGGTTTTATGCTAGTGTAGGAATTTCAATCTCTGTTGCAATTACTGTAATTGTTTATATCCAAGTGCAGTTTGGTTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTATTTAATTGGATCTCCTCTTTATATAAAACCAAAATCTGAAGGGAGTTTGTTCACTGGATTATTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATTAATGTTCAGTTGAATTATAATGACGACTGCTACTATAAAGCACCTGAATCAAAGCTCCTCGAACCATCCACTGACTTCAG................................................................................................................................................................................................................................................................................................................................................................GTGTTTGAATAGAGCTTGCATAATTGAAGATCCTCACGTGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCGTGGAGTCTCTGCTTTGTGGAACAAGTCGAAATAATGAAGTGTTTTCTTAGAGTTCTTCCCATGTGGTCCACCTGTATTATGCTTCTTGTGTCGTTCGGTCAGCCACTTTCGATATATCAACTATTGACCGTGGATAGACACATTACTCCTCAGTTTGAAATCCCAGCAGGATCATTCGGCATGATTACCGTTTTTTCTTTGACAATCTGGATGGCTTTTTACGATCGTGCAGTGGTTCCTTTACTGTCTAGGTATACTGGACTGTCGACTGGGATAAGTCCATTTTCCAGAATGGGGATTGGCTTATTTCTGGGCATTGTGGGTACGACACTTTCAGCTATAACAGAAACCATACGACGCAATAAGGCAATCAACGCAGGGTTTGAGGATGATCCGAACGCTGTGTTAAACATGTCCTCTATGTGGTTTGTACCACAGTTGGCACTATACGGGGTGGCTGAGGCTTTGAATGTGGTTGGACAGATCGAGTTTATATATAGTCTATTTCCAAAAACCATGTCCAGCTTTGCAGCAGCTCTTTACACGTTTGGCCTAGCGCTTGCCGGCTTAATTAACAGTCTCTTGGTGAGCGTGGTGGATAGTACTACCTCAGCTGGAGGCAACACAAGTTGGCTCGCCACAAACATAAACAGAGGTCATCTAGATTACTACTGCTGGCTAATAACTTTCTTATGTGTGATTAACTTCCTCTATTTTTTAGCCGTTTGTCGATTCACTGATCAGCATCACCATGATGGTAGGAGTAGCTTATTTCCTGATGCAGAAGAGGAACACTCTGAGAATAGGCGTTTTCATGGTGCGTAATGTGTACGCTATGTTTGTGTTTGAACATTTGCATGTATTGTAACTTCTCTTAAATCCTTGACCTAGAATAAATTGAGGGCTTCTGTCTTTAAGACAGAGAAGACGAGTGCCAAAAAACCTCACACATATGTCAATAAAATTTTTAGTTGATGAGTATTATTTTTCTTGATAGCTGTGGTTAAGTAGTTTAACCAGTAAAAATGAATGGATAGATTATGTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315833" ref_strand="+" ref_description="SGN-U315833        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr1:19438192-19442640 FORWARD | Aliases: F9I5.4, F9I5_4(evalue: 5e-51, score=198) genbank/nr: gi|15218183|ref|NP_175630.1| peptide transporter -related [Arabidopsis thaliana] gi|25405532|pir||H96561 probable peptide transporter [imported] - Arabidopsis thaliana gi|6850341|gb|AAF29404.1| peptide transporter, putative [Arabidopsis thaliana](evalue: 3e-49, score=198)">
      <seq>ctttttacgaccgtgttttggtccctttgctatctaaatatactggacggccaagagggctaagtcctgttacccgaatgggaattggcttattagtctcgtgcatgtctatggcattgtctgcaataacagaaagcataagacaaaaaaaggcaatagaggaagggcatgaggacgacccacatgctttagtgaacatgtctgctatgtggctcgtgccacagtatttactactcggagtggctgaggcagcccatgcagttggacagattgagttcttctactctctatttcccaaaagcatggctagcatcgcgtcagctatgtacactattggaactgctgtgtcgagtttgtttggaagtattctggtgagtggtgtggattggcttacatcaacgggaggtaaaacgagctggctttctagcaacattaataagggtcacttggattactatttctggctacttgcttttttgagtttgctcaactttttctattttgtgatggtctgccggttatatgaaactgggaatgatggaagcagtaggttatctcatgtggctgatgaggaagaatgcgactatagactcttatctgaatcttgatgatatgttgtactgcatccttgaatgatccaactacaactaatttaggcagtagagtgttttcatatatattttgaagtatgttgtgaatttcctcagacaaaattttggatatcagattgtcttttgtcgaatgtaggcttaagaaaatggtacttgttggattttaagcatcttaatagtattttaaagtgcataattcctaatgagaaatgtcaaatttatagctgcacgtttgaagcatatgttgtgcagcatttgagttgtcatttgatgacattatatgctcaattacttgtattcgtagttgaatatggtcattagttgttagtaaaaaaaaaaaaaaaagaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="19678" stop="105666"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="19978" g_stop="20924" g_length="947"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="947" r_length="947" r_score="0.996"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="20925" i_stop="21913" i_length="989">
            <donor d_prob="0.887" d_score="0.92"/>
            <acceptor a_prob="0.575" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="21914" g_stop="21927" g_length="14"/>
          <reference_exon_boundary r_type="cDNA" r_start="948" r_stop="961" r_length="14" r_score="0.714"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U315833" ref_strand="+">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>961</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315833" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="19978" e_stop="20924"/>
          <exon e_start="21914" e_stop="21927"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTTTTTACGACCGTGTTTTGGTCCCTTTGCTATCTAAATATACTGGACGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGCTTATTAGTCTCGTGCATGTCTATGGCATTGTCTGCAATAACAGAAAGCATAAGACAAAAAAAGGCAATAGAGGAAGGGCATGAGGACGACCCACATGCTTTAGTGAACATGTCTGCTATGTGGCTCGTGCCACAGTATTTACTACTCGGAGTGGCTGAGGCAGCCCATGCAGTTGGACAGATTGAGTTCTTCTACTCTCTATTTCCCAAAAGCATGGCTAGCATCGCGTCAGCTATGTACACTATTGGAACTGCTGTGTCGAGTTTGTTTGGAAGTATTCTGGTGAGTGGTGTGGATTGGCTTACATCAACGGGAGGTAAAACGAGCTGGCTTTCTAGCAACATTAATAAGGGTCACTTGGATTACTATTTCTGGCTACTTGCTTTTTTGAGTTTGCTCAACTTTTTCTATTTTGTGATGGTCTGCCGGTTATATGAAACTGGGAATGATGGAAGCAGTAGGTTATCTCATGTGGCTGATGAGGAAGAATGCGACTATAGACTCTTATCTGAATCTTGATGATATGTTGTACTGCATCCTTGAATGATCCAACTACAACTAATTTAGGCAGTAGAGTGTTTTCATATATATTTTGAAGTATGTTGTGAATTTCCTCAGACAAAATTTTGGATATCAGATTGTCTTTTGTCGAATGTAGGCTTAAGAAAATGGTACTTGTTGGATTTTAAGCATCTTAATAGTATTTTAAAGTGCATAATTCCTAATGAGAAATGTCAAATTTATAGCTGCACGTTTGAAGCATATGTTGTGCAGCATTTGAGTTGTCATTTGATGACATTATATGCTCAATTACTTGTATTCGTAGTTGAATATGGTCATTAGTTGTTAGTAACTCAGGTAAACTATTAACTATGCATCTACTCAATTCAGTACCTCATTATCTTCCTATTTATTCTTTTCAGTTATCATTTTATTTTCAACAATAATTTGTTATATTTATGATATATTACGTCAATAGTATTAACTATTAAATTATCAAAGTAATAATTACACAAATTTCAATCACGTAATGACTTTCCAGACCCTTAAAAGACTTCATAAGAAAGATGGATGAATGTAAAGAAAGTGAAAAACTTAGGACGAACAACTACTTCCCTAGCCTCTTATATATAGTAGTAATAACGTACTAAAAAATAAAGATTTTTTTAAAAACATAAAAGAAACATTTCATTAAGGAAACAATCTTTTTTTTCTATGTCGTAATTTTTTCATATATTCCTTCGGTCGAACAATAGTTGTCCACTATACTATTTTGAAATGTTCAACAATACTTGTCCACTTTATGAAATCAATGAATACTTTTACGCTTATTTTCTAATTTATCCTTATCATTAATTATAGTTAATTTTTCAACACATGTTATTTATTATATTTAAATGGTAATATAGTAAAACTTATTTTTCTATTTATAATTTCTTAAGGGGTTTATCAAGTCGATAATGAACAACTATTGTTGGACAGAGTATCTTTTAAATATTTTGAATTGTCTATTATTGTGACTTATAGTACTTACATAGTTTACAAATACATAAATTTTCAGCCAAATTTAAACTGTTAGGCTCTTAAAAATTGAAATGTGTCAAATAAATTGAGATAGATGGATCGGAATAGTAATTCTGATAGTTTTTTGGGAATAAGTGTTGGGAGAAACAAATGCATGATAGTAAATAAGAATATTGTGATCTTTTTAAATGTAGCCATTATATGGAACAAATTATTATGGTTATTTCAGGCAAGGAGCATGGACCTGATCACCTGGGAATGTGGTTTATTGTTTCTACTCTTTCTCCCACTCATATTATAAAGCCATTGAAGTGCAAAAACAGAGAAACAAAGTGAA</genome_strand>
        <mrna_strand>CTTTTTACGACCGTGTTTTGGTCCCTTTGCTATCTAAATATACTGGACGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGCTTATTAGTCTCGTGCATGTCTATGGCATTGTCTGCAATAACAGAAAGCATAAGACAAAAAAAGGCAATAGAGGAAGGGCATGAGGACGACCCACATGCTTTAGTGAACATGTCTGCTATGTGGCTCGTGCCACAGTATTTACTACTCGGAGTGGCTGAGGCAGCCCATGCAGTTGGACAGATTGAGTTCTTCTACTCTCTATTTCCCAAAAGCATGGCTAGCATCGCGTCAGCTATGTACACTATTGGAACTGCTGTGTCGAGTTTGTTTGGAAGTATTCTGGTGAGTGGTGTGGATTGGCTTACATCAACGGGAGGTAAAACGAGCTGGCTTTCTAGCAACATTAATAAGGGTCACTTGGATTACTATTTCTGGCTACTTGCTTTTTTGAGTTTGCTCAACTTTTTCTATTTTGTGATGGTCTGCCGGTTATATGAAACTGGGAATGATGGAAGCAGTAGGTTATCTCATGTGGCTGATGAGGAAGAATGCGACTATAGACTCTTATCTGAATCTTGATGATATGTTGTACTGCATCCTTGAATGATCCAACTACAACTAATTTAGGCAGTAGAGTGTTTTCATATATATTTTGAAGTATGTTGTGAATTTCCTCAGACAAAATTTTGGATATCAGATTGTCTTTTGTCGAATGTAGGCTTAAGAAAATGGTACTTGTTGGATTTTAAGCATCTTAATAGTATTTTAAAGTGCATAATTCCTAATGAGAAATGTCAAATTTATAGCTGCACGTTTGAAGCATATGTTGTGCAGCATTTGAGTTGTCATTTGATGACATTATATGCTCAATTACTTGTATTCGTAGTTGAATATGGTCATTAGTTGTTAGTAAAAAAA.............................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAGAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315830" ref_strand="+" ref_description="SGN-U315830        Tomato 200607 #1 [5 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr1:19438192-19442640 FORWARD | Aliases: F9I5.4, F9I5_4(evalue: 8e-42, score=167) genbank/nr: gi|15218183|ref|NP_175630.1| peptide transporter -related [Arabidopsis thaliana] gi|25405532|pir||H96561 probable peptide transporter [imported] - Arabidopsis thaliana gi|6850341|gb|AAF29404.1| peptide transporter, putative [Arabidopsis thaliana](evalue: 6e-40, score=167)">
      <seq>tggtctcctggttttgtgatctttgtggacatgaatgtgtttgcattttccttacttcaaacaaaaaccatggatagacacatcttccctcactttgaagtaccagcagcatcattcagtgtgttcttgattattgctttgacaatctggattgctttctacgaccgtgttttggtccctttactatcaaaatatactggacagccaagagggctaagtcctgtcaccagaatggggattggcttaatagcctccagtatgtctattgcattatcagcaataacagaaagcataagacgacaaagggcaatagaggaaggacatgaggacgatccaaatgctttagtgaacatgtctgctatgtggtttgtgccacagtatgcactactcggagtggctgaggctgcccatgcagttggacagattgagttcttgtatgctctattaccgaaaagcatgtccagcactgcgtcagctatgtacactgttgggactgctgtgtcgagtttgattggaagtattctggtgagtagtgtggattggctttcatcaacgggaggtaaaacgagctggctttcgagcaacattaaccagggtcacattgattactttttctggctacttacatttttgaacttgctaaacttgttatattttttgctcatctgctggttttatgaagttggcaataatgggagcagtaattcagctcatgttgctgaagataaagaatgtgattatagactcttatctgaat</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="22860" stop="24216"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="23160" g_stop="23916" g_length="757"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="757" r_length="757" r_score="0.997"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U315830" ref_strand="+">
        <total_alignment_score>0.997</total_alignment_score>
        <cumulative_length_of_scored_exons>757</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315830" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="23160" e_stop="23916"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TGGTCCACTGGTTTTGTGATCTTTGTGGACATGAATGTGTTTGCATTTTCCTTACTTCAAACAAAAACCATGGATAGACACATCTTCCCTCACTTTGAAGTACCAGCAGCATCATTCAGTGTGTTCTTGATTATTGCTTTGACAATCTGGATTGCTTTCTACGACCGTGTTTTGGTCCCTTTACTATCAAAATATACTGGACAGCCAAGAGGGCTAAGTCCTGTCACCAGAATGGGGATTGGCTTAATAGCCTCCAGTATGTCTATTGCATTATCAGCAATAACAGAAAGCATAAGACGACAAAGGGCAATAGAGGAAGGACATGAGGACGATCCAAATGCTTTAGTGAACATGTCTGCTATGTGGTTTGTGCCACAGTATGCACTACTCGGAGTGGCTGAGGCTGCCCATGCAGTTGGACAGATTGAGTTCTTGTATGCTCTATTACCGAAAAGCATGTCCAGCACTGCGTCAGCTATGTACACTGTTGGGACTGCTGTGTCGAGTTTGATTGGAAGTATTCTGGTGAGTAGTGTGGATTGGCTTTCATCAACGGGAGGTAAAACGAGCTGGCTTTCGAGCAACATTAACCAGGGTCACATTGATTACTTTTTCTGGCTACTTACATTTTTGAACTTGCTAAACTTGTTATATTTTTTGCTCATCTGCTGGTTTTATGAAGTTGGCAATAATGGGAGCAGTAATTCAGCTCATGTTGCTGAAGATAAAGAATGTGATTATAGACTCTTATCTGAAT</genome_strand>
        <mrna_strand>TGGTCTCCTGGTTTTGTGATCTTTGTGGACATGAATGTGTTTGCATTTTCCTTACTTCAAACAAAAACCATGGATAGACACATCTTCCCTCACTTTGAAGTACCAGCAGCATCATTCAGTGTGTTCTTGATTATTGCTTTGACAATCTGGATTGCTTTCTACGACCGTGTTTTGGTCCCTTTACTATCAAAATATACTGGACAGCCAAGAGGGCTAAGTCCTGTCACCAGAATGGGGATTGGCTTAATAGCCTCCAGTATGTCTATTGCATTATCAGCAATAACAGAAAGCATAAGACGACAAAGGGCAATAGAGGAAGGACATGAGGACGATCCAAATGCTTTAGTGAACATGTCTGCTATGTGGTTTGTGCCACAGTATGCACTACTCGGAGTGGCTGAGGCTGCCCATGCAGTTGGACAGATTGAGTTCTTGTATGCTCTATTACCGAAAAGCATGTCCAGCACTGCGTCAGCTATGTACACTGTTGGGACTGCTGTGTCGAGTTTGATTGGAAGTATTCTGGTGAGTAGTGTGGATTGGCTTTCATCAACGGGAGGTAAAACGAGCTGGCTTTCGAGCAACATTAACCAGGGTCACATTGATTACTTTTTCTGGCTACTTACATTTTTGAACTTGCTAAACTTGTTATATTTTTTGCTCATCTGCTGGTTTTATGAAGTTGGCAATAATGGGAGCAGTAATTCAGCTCATGTTGCTGAAGATAAAGAATGTGATTATAGACTCTTATCTGAAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315831" ref_strand="+" ref_description="SGN-U315831        Tomato 200607 #1 [19 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr1:19438192-19442640 FORWARD | Aliases: F9I5.4, F9I5_4(evalue: 2e-147, score=519) genbank/nr: gi|15218183|ref|NP_175630.1| peptide transporter -related [Arabidopsis thaliana] gi|25405532|pir||H96561 probable peptide transporter [imported] - Arabidopsis thaliana gi|6850341|gb|AAF29404.1| peptide transporter, putative [Arabidopsis thaliana](evalue: 2e-145, score=519)">
      <seq>gatggtcctggggtttagtgtttttttctctctctctttttgtgtctgctaatcatatattaaagcaaagaagagaagtgaagaggaaacagaaaatagcagtggaaatgggcactgaaatacaagatgaagtgaacacaagaaagggtggtcttaggaccatgccattcatcattttgaatgaatcatttgaaaggatagcaagttatggttcacaaacaaacatgataatttatttgatgacatattataacatgagtgctgctactggcactagtattattggtatatggggtgcactttcaagtggattggctattgttggggcgattattgctgattgttattggggtcgatataatgctgttgcctatggaaccatcttcacttttattggaatggttattctctggcttacatcaatgattccgcaactcacaactttggcatgttctcattttcaacatgtttgtaatggaccaacagcattccagcttgctgttctgtctacatcatttgcgtttacgtctatcggagctggttttgttagaccttgttctataatgtttggtgctgatcaattggaacaaaaaggcaaccctgaaaacaagaagattgttgagagctatttcaattggtactatgctagcacaggggttgcaactatgattgcagttaccgttattatttatattcaagatcgttatggttggcaaattggctttggtatccctgttatactcatggttttgtctgtctcaacgttcctaatcggttcttctctttatatcaaagtgaaacccgatacaaacaacttgctattaggattgttccaagcaggtgcagctgcttttagaaaaaggaaaacccctctttcattgactggttgtgatgactactatcattcgccatatgaaacagaggtcttaacgccatcaaaagacttcaggtgcttaaatagagcttgtatgattgaagatcctgaaagagatttgaatgctgatggatcagcttcaaatccatggaatctgtgtagtgtggaacgagttgaatcactcaaggctcttattagaataattcctatgtggtcagccggttttatgatgtttgtagacatgaatgtattcgcattttctgtacttcaaacaaagacaatggatagacatatcttgccacactttgaagtaccagcagcatcattcagtgtgttcttgattattgctttaacaatctggattactttctatgatcgtgttttggtccctttgctatcaaaatatactggaaggccaagagggctaagtcctgttacccgaatgggaattgggttaacagtctcttgtatgtctatggcattgtcagcaataacagaaagcataagacgaaaaagggcaatcacagaagggcatgaggacgacccaaatgctttagtaaacatgtctgctatgtggttcgtgccacagtatgcactactcgggatagctgaggctacccatggagttggacagattgaattcttctacactctattaccgaaaagcatggccagcatcgcgtcagctatgtacactgttggaactgctgtgtcgagtttgattggaagtattctggtgagtagtgaggattggcttacatcaaggggaggtaaaacgagctggctttctagcaacattaataagggtcacctggattaccatttctggttgcttgctttaatgagttttctcaacttgttatattttctatgggtctgccggttttatgagactgggaatgatgaattacctcatgtggctgatgaggaagagtgtgattatagactcttacatgaatcttgatgatatgttgtactgcattcttgacagttaattaagttagataataaagtgttcttatatgttaagacctttacaatcttcaaaacaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="-" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="28742" stop="13197"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="28517" g_stop="28366" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="29" r_stop="177" r_length="149" r_score="0.868"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="28365" i_stop="28283" i_length="83">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.995" a_score="0.96"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="28282" g_stop="28065" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="395" r_length="218" r_score="0.954"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="28064" i_stop="27980" i_length="85">
            <donor d_prob="0.508" d_score="1.00"/>
            <acceptor a_prob="0.988" a_score="0.92"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="27979" g_stop="27426" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="949" r_length="554" r_score="0.933"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="27425" i_stop="27344" i_length="82">
            <donor d_prob="1.000" d_score="0.98"/>
            <acceptor a_prob="0.974" a_score="0.94"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="27343" g_stop="26367" g_length="977"/>
          <reference_exon_boundary r_type="cDNA" r_start="950" r_stop="1923" r_length="974" r_score="0.938"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="26366" i_stop="26172" i_length="195">
            <donor d_prob="0.000" d_score="0.86"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="26171" g_stop="26155" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="1924" r_stop="1940" r_length="17" r_score="0.765"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="-" ref_id="SGN-U315831" ref_strand="+">
        <total_alignment_score>0.933</total_alignment_score>
        <cumulative_length_of_scored_exons>1918</cumulative_length_of_scored_exons>
        <coverage percentage="0.989" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U315831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="28517" e_stop="28366"/>
          <exon e_start="28282" e_stop="28065"/>
          <exon e_start="27979" e_stop="27426"/>
          <exon e_start="27343" e_stop="26367"/>
          <exon e_start="26171" e_stop="26155"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCTCTTTCCCTTTGTCTCTTTTAATCATATATCAAAGCAAAGAAAAAAAAAACTGAAGAGGAAACAGAGAACGAAACTGAAAATGGGCACTGAAATACAAGATGAAGTGAACACAAGAAAGGGTGGTCTTAGGACCATGCCATTCATCATTTGTACTACTCTCACTCTACTCTTTTACTTTAAATTGTTTTGCAATGTGTTGATTCTAATTTCAATTTTTATTTGTTGTTTTCAGTGAATGAATCATTTGAAAGGATAGCAAGTTATGGTTCACAAACAAATCTGATAATTTATTTGATGACATATTATAGCATGAGTGCTGCTACGGGTACTAGTATTATTGGATTATGGGGTGCACTTTCAGGTGGATTAGCTATTGTTGGGGCGATTATTGCCGATTGTTATTGGGGTCGATATAATGCTGTTGCCTATGGAACCATCTTCACTTTTATTGTGAGTTCTGTGTGCCATTTCAATGGAATAACATGTTTTTTTAAAACCACCATATCTGTTATGGCTTAACATTCTCCTTATACAGGGAATGGTTATTCTTTGGCTCACATCAATGATACCGCAACTCACGACTTTCGCCTGTTCACATTTTCAACATGTTTGTAATGGACCAACAGCATTCCAACTTGCTGTTCTGTCTACATCATTTGCGTTTACGTCTATTGGAGCTGGTTTTGTTAGACCTTGTTCTATAATGTTTGGTGCTGATCAATTGGAACAAAAAGGGAACCCTGAGAATGAGAAGATTATTGAGAGATATTTCAATTGGTACTATGCTAGCAATGGGGTTGCAACTATGATTGCAGTTACCACAATTATTTATATTCAAGATCGTTATGGTTGGCAAATTGGCTTTGGCGTCCCTGTTTTACTCATGGTTTTGTCTATCTCAACGTTCCTAATCGGTTCTCCTCTTTATATCAAAGTGAAAACTGATACAAACAACTTGCTAGTAGGATTGTCCCAAGCATGTGTAGCAGCATTTAGAAAAAGAAAAACCCGTCTTTCATTGACTGGTTGCGATGACTACTATCATTCGCCATATGAAACAGAGGTCTTAACGCCATCAAAGGACTTCAGGTCAGTGTCTCCATCTTATGTCTAATTTTATTATATTGCACTTCATTAGAATAAGAGTTTATTGTATGATGAATATATGTAGGTGTTTAAATAGAGCTTGTATGATTGAAGATCGTGAAAGAGATTTGAATCCTGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACGAGTTGAATCACTCAAGGCTCTTATTAGAATAATTCCTATGTGGTCAACCGGTTTAATGGTGTTTGTGGACATGAATGTATTCGCATTTGCTGTACTTCAAACAAAGACAATGGATAGACATATCTTGCCGCACTTTGAAGTACCAGCAGCATCATTCAGTGTGTTCCTGATTATCGCTTTAACAATGTGGATTATTTTCTATGATCGTCTTTTGGTCCCTTTGCTATCTAAATATACTGGAAGTCCAAGAGGGCTAAGTCCTGTTACCCGAATGAGAATTGGGTTAACAGTCTCTTGTATGTCAATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATCACAGAAGGGCATGAGGACGATCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGTATAGCTACGGCTACACATGGAGTTGGACAAATTGAGTTCTTCTACACTCTATTACCGAAAAGCATGGCAAGCATCGCGTCTGCTATAGACACTGTTGGGAATGCAGCGTCGAGTTTGATTGGAAGTTTTCTTGTGAGTAGTGAGGATTGGCTTACATCAACAGGAGGTAAAACAAGCTGGCTTTCTAGCAACATTAATAAAGGTCACCTGGATTACCATTTCTGGCTGCTTACTTTTTTGAGTTTGCTCAACTTGTTATATTTTCATTTCATCTGCCGGTTTTATGAAACTGGGAATGATGCATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATATGTTGTACTGCATTCTTGACAGTTAATAAAGTTAGATAATGAAGTGTTTTTGTATGTTAACACCTCTACAATCTTCATATAATTTTTCTATGTATCTTATGACTTTCCTTACGTTCCGCGATAAATATGTCACTTAACTTAATAGACTAACATTAAAATACATTTATTTTTAATTTTTTTTAGATTAAATGGTTAAAAAGTCATTTTTGTCACTTGAATTAGAAAAATATTAGAAAGTTAGTTTCACTTTTTTTTTTCGCTCCGTATCAATTTTAGCAAAAATAAAAAGTAAC</genome_strand>
        <mrna_strand>TCTCTCTCTTTTTGTGTCTGCTAATCATATATTAAAGCAAAG-AAGAGA-A-GTGAAGAGGAAACAGAAAATAGCAGTGGAAATGGGCACTGAAATACAAGATGAAGTGAACACAAGAAAGGGTGGTCTTAGGACCATGCCATTCATCATTT...................................................................................TGAATGAATCATTTGAAAGGATAGCAAGTTATGGTTCACAAACAAACATGATAATTTATTTGATGACATATTATAACATGAGTGCTGCTACTGGCACTAGTATTATTGGTATATGGGGTGCACTTTCAAGTGGATTGGCTATTGTTGGGGCGATTATTGCTGATTGTTATTGGGGTCGATATAATGCTGTTGCCTATGGAACCATCTTCACTTTTATT.....................................................................................GGAATGGTTATTCTCTGGCTTACATCAATGATTCCGCAACTCACAACTTTGGCATGTTCTCATTTTCAACATGTTTGTAATGGACCAACAGCATTCCAGCTTGCTGTTCTGTCTACATCATTTGCGTTTACGTCTATCGGAGCTGGTTTTGTTAGACCTTGTTCTATAATGTTTGGTGCTGATCAATTGGAACAAAAAGGCAACCCTGAAAACAAGAAGATTGTTGAGAGCTATTTCAATTGGTACTATGCTAGCACAGGGGTTGCAACTATGATTGCAGTTACCGTTATTATTTATATTCAAGATCGTTATGGTTGGCAAATTGGCTTTGGTATCCCTGTTATACTCATGGTTTTGTCTGTCTCAACGTTCCTAATCGGTTCTTCTCTTTATATCAAAGTGAAACCCGATACAAACAACTTGCTATTAGGATTGTTCCAAGCAGGTGCAGCTGCTTTTAGAAAAAGGAAAACCCCTCTTTCATTGACTGGTTGTGATGACTACTATCATTCGCCATATGAAACAGAGGTCTTAACGCCATCAAAAGACTTCAG..................................................................................GTGCTTAAATAGAGCTTGTATGATTGAAGATCCTGAAAGAGATTTGAATGCTGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACGAGTTGAATCACTCAAGGCTCTTATTAGAATAATTCCTATGTGGTCAGCCGGTTTTATGATGTTTGTAGACATGAATGTATTCGCATTTTCTGTACTTCAAACAAAGACAATGGATAGACATATCTTGCCACACTTTGAAGTACCAGCAGCATCATTCAGTGTGTTCTTGATTATTGCTTTAACAATCTGGATTACTTTCTATGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGGAAGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGGTTAACAGTCTCTTGTATGTCTATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATCACAGAAGGGCATGAGGACGACCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGGATAGCTGAGGCTACCCATGGAGTTGGACAGATTGAATTCTTCTACACTCTATTACCGAAAAGCATGGCCAGCATCGCGTCAGCTATGTACACTGTTGGAACTGCTGTGTCGAGTTTGATTGGAAGTATTCTGGTGAGTAGTGAGGATTGGCTTACATCAAGGGGAGGTAAAACGAGCTGGCTTTCTAGCAACATTAATAAGGGTCACCTGGATTACCATTTCTGGTTGCTTGCTTTAATGAGTTTTCTCAACTTGTTATATTTTCTATGGGTCTGCCGGTTTTATGAGACTGGGAATGATGAATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATG--ATATGTTGTACTGCATTCTTGACAGTTAATTAAGTTAGATAATAAAGTGTTCTTATATGTTAAGACCTTTACAATCTTCA-AAA...................................................................................................................................................................................................CAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U335348" ref_strand="-" ref_description="SGN-U335348        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr1:19438192-19442640 FORWARD | Aliases: F9I5.4, F9I5_4(evalue: 2e-08, score=56.6) genbank/nr: Receptor(evalue: 2e-11, score=73.2)">
      <seq>ggcaccagaaaagcatggcaagcatcgcgtctgctatagacactgttgggaatgcagcgtcgagtttgattggaagttttcttgtgagtagtgaggattggcttacatcaacaggaggtaaaacaagctggctttctagcaacattaataaaggtcacctggattaccatttctggctgcttacttttttgagtttgctcaacttgttatattttcatttcatctgccggttttatgaaactgggaatgatgcattacctcatgtggctgatgaggaagagtgtgattatagactcttacatgaatcttgatgatatatgttgtactgcattcttgacagttaataaagttagataatgaagtgtttttgtatgttaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="-" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="27061" stop="26086"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="26764" g_stop="26388" g_length="377"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="378" r_length="378" r_score="0.987"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="379" polyA_stop="393"/>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="-" ref_id="SGN-U335348" ref_strand="-">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>377</cumulative_length_of_scored_exons>
        <coverage percentage="0.959" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U335348" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="26764" e_stop="26388"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTACC-GAAAAGCATGGCAAGCATCGCGTCTGCTATAGACACTGTTGGGAATGCAGCGTCGAGTTTGATTGGAAGTTTTCTTGTGAGTAGTGAGGATTGGCTTACATCAACAGGAGGTAAAACAAGCTGGCTTTCTAGCAACATTAATAAAGGTCACCTGGATTACCATTTCTGGCTGCTTACTTTTTTGAGTTTGCTCAACTTGTTATATTTTCATTTCATCTGCCGGTTTTATGAAACTGGGAATGATGCATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATATGTTGTACTGCATTCTTGACAGTTAATAAAGTTAGATAATGAAGTGTTTTTGTATGTTAA</genome_strand>
        <mrna_strand>GGCACCAGAAAAGCATGGCAAGCATCGCGTCTGCTATAGACACTGTTGGGAATGCAGCGTCGAGTTTGATTGGAAGTTTTCTTGTGAGTAGTGAGGATTGGCTTACATCAACAGGAGGTAAAACAAGCTGGCTTTCTAGCAACATTAATAAAGGTCACCTGGATTACCATTTCTGGCTGCTTACTTTTTTGAGTTTGCTCAACTTGTTATATTTTCATTTCATCTGCCGGTTTTATGAAACTGGGAATGATGCATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATATGTTGTACTGCATTCTTGACAGTTAATAAAGTTAGATAATGAAGTGTTTTTGTATGTTAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315831" ref_strand="+" ref_description="SGN-U315831        Tomato 200607 #1 [19 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr1:19438192-19442640 FORWARD | Aliases: F9I5.4, F9I5_4(evalue: 2e-147, score=519) genbank/nr: gi|15218183|ref|NP_175630.1| peptide transporter -related [Arabidopsis thaliana] gi|25405532|pir||H96561 probable peptide transporter [imported] - Arabidopsis thaliana gi|6850341|gb|AAF29404.1| peptide transporter, putative [Arabidopsis thaliana](evalue: 2e-145, score=519)">
      <seq>gatggtcctggggtttagtgtttttttctctctctctttttgtgtctgctaatcatatattaaagcaaagaagagaagtgaagaggaaacagaaaatagcagtggaaatgggcactgaaatacaagatgaagtgaacacaagaaagggtggtcttaggaccatgccattcatcattttgaatgaatcatttgaaaggatagcaagttatggttcacaaacaaacatgataatttatttgatgacatattataacatgagtgctgctactggcactagtattattggtatatggggtgcactttcaagtggattggctattgttggggcgattattgctgattgttattggggtcgatataatgctgttgcctatggaaccatcttcacttttattggaatggttattctctggcttacatcaatgattccgcaactcacaactttggcatgttctcattttcaacatgtttgtaatggaccaacagcattccagcttgctgttctgtctacatcatttgcgtttacgtctatcggagctggttttgttagaccttgttctataatgtttggtgctgatcaattggaacaaaaaggcaaccctgaaaacaagaagattgttgagagctatttcaattggtactatgctagcacaggggttgcaactatgattgcagttaccgttattatttatattcaagatcgttatggttggcaaattggctttggtatccctgttatactcatggttttgtctgtctcaacgttcctaatcggttcttctctttatatcaaagtgaaacccgatacaaacaacttgctattaggattgttccaagcaggtgcagctgcttttagaaaaaggaaaacccctctttcattgactggttgtgatgactactatcattcgccatatgaaacagaggtcttaacgccatcaaaagacttcaggtgcttaaatagagcttgtatgattgaagatcctgaaagagatttgaatgctgatggatcagcttcaaatccatggaatctgtgtagtgtggaacgagttgaatcactcaaggctcttattagaataattcctatgtggtcagccggttttatgatgtttgtagacatgaatgtattcgcattttctgtacttcaaacaaagacaatggatagacatatcttgccacactttgaagtaccagcagcatcattcagtgtgttcttgattattgctttaacaatctggattactttctatgatcgtgttttggtccctttgctatcaaaatatactggaaggccaagagggctaagtcctgttacccgaatgggaattgggttaacagtctcttgtatgtctatggcattgtcagcaataacagaaagcataagacgaaaaagggcaatcacagaagggcatgaggacgacccaaatgctttagtaaacatgtctgctatgtggttcgtgccacagtatgcactactcgggatagctgaggctacccatggagttggacagattgaattcttctacactctattaccgaaaagcatggccagcatcgcgtcagctatgtacactgttggaactgctgtgtcgagtttgattggaagtattctggtgagtagtgaggattggcttacatcaaggggaggtaaaacgagctggctttctagcaacattaataagggtcacctggattaccatttctggttgcttgctttaatgagttttctcaacttgttatattttctatgggtctgccggttttatgagactgggaatgatgaattacctcatgtggctgatgaggaagagtgtgattatagactcttacatgaatcttgatgatatgttgtactgcattcttgacagttaattaagttagataataaagtgttcttatatgttaagacctttacaatcttcaaaacaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="29945" stop="105665"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="30244" g_stop="30420" g_length="177"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="177" r_length="177" r_score="0.960"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="30421" i_stop="30515" i_length="95">
            <donor d_prob="0.994" d_score="0.96"/>
            <acceptor a_prob="0.989" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="30516" g_stop="30733" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="178" r_stop="395" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="30734" i_stop="30814" i_length="81">
            <donor d_prob="0.735" d_score="1.00"/>
            <acceptor a_prob="0.967" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="30815" g_stop="31368" g_length="554"/>
          <reference_exon_boundary r_type="cDNA" r_start="396" r_stop="949" r_length="554" r_score="0.995"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="31369" i_stop="31453" i_length="85">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.958" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="31454" g_stop="32425" g_length="972"/>
          <reference_exon_boundary r_type="cDNA" r_start="950" r_stop="1921" r_length="972" r_score="0.998"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="32426" i_stop="33028" i_length="603">
            <donor d_prob="0.000" d_score="0.98"/>
            <acceptor a_prob="0.000" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="33029" g_stop="33047" g_length="19"/>
          <reference_exon_boundary r_type="cDNA" r_start="1922" r_stop="1940" r_length="19" r_score="0.842"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U315831" ref_strand="+">
        <total_alignment_score>0.994</total_alignment_score>
        <cumulative_length_of_scored_exons>1940</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315831" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="30244" e_stop="30420"/>
          <exon e_start="30516" e_stop="30733"/>
          <exon e_start="30815" e_stop="31368"/>
          <exon e_start="31454" e_stop="32425"/>
          <exon e_start="33029" e_stop="33047"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CATGGTCCTGGGGTTTAGTGTTTTTTTCTCTCTCTCTTTTTGTGTCTGCTAATCATATATTAAAGCAAAGAAGAGAAGTGAAGAGGAAACAGAAAATAGCAGTGGAAATGGGCACAGAATCACAAGCTGAAATAAACACAAGAAAGGGTGGTCTTAGGACCATGCCATTCATCATTTGTACTACTCTCACTCTACTCTTTTACTTCAAATTGTTTTGCAATGTGTTAATTCTAATATCAATTTTTTGTTATTGTTGTTGCTATTGTTTTCAGTGAATGAATCATTTGAAAGGATAGCAAGTTATGGTTCACAAACAAACATGATAATTTATTTGATGACATATTATAACATGAGTGCTGCTACTGGCACTAGTATTATTGGTATATGGGGTGCACTTTCAAGTGGATTGGCTATTGTTGGGGCGATTATTGCTGATTGTTATTGGGGTCGATATAATGCTGTTGCCTATGGAACCATCTTCACTTTTATTGTGAGTTGTGCTAATTTAACAACATTTTTTTTAAAATTTGAACCAGCATATCTGTTATGGCTTAACATTCTTCTTGGACAGGGAATGGTTATTCTCTGGCTTACATCAATGATTCCGCAACTCACAACTTTGGCATGTTCTCATTTTCAACATGTTTGTAATGGACCAACAGCATTCCAGCTTGCTGTTCTGTTTACATCTTTTGTGTTTACGTCTATCGGAGCTGGTTTTGTTAGACCTTGTTCTATAATGTTTGGTGCTGATCAATTGGAACAAAAAGGCAACCCTGAAAACAAGAAGATTGTTGAGAGCTATTTCAATTGGTACTATGCTAGCACAGGGGTTGCAACTATGATTGCAGTTACCGTTATTATTTATATTCAAGATCGTTATGGTTGGCAAATTGGCTTTGGTATCCCTGTTATACTCATGGTTTTGTCTGTCTCAACGTTCCTAATCGGTTCTTCTCTTTATATCAAAGTGAAACCCGATACAAACAACTTGCTATTAGGATTGTTCCAAGCAGGTGCAGCTGCTTTTAGAAAAAGGAAAACCCCTCTTTCATTGACTGGTTGTGATGACTACTATCATTCGCCATATGAAACAGAGGTCTTAACGCCATCAAAAGACTTCAGGTCAGTGTCTCCGTCTTTTGTCTGAGTTTATTATATTACAAGTTCATTGGAATAAGACATTATTGTATGATGAACATATATATAGGTGCTTAAATAGAGCTTGTATGATTGAAGATCCTGAAAGAGATTTGAATGCTGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACGAGTTGAATCACTCAAGGCTCTTATTAGAATAATTCCTATGTGGTCAGCCGGTTTTATGATGTTTGTAGACATGAATGTATTCGCATTTTCTGTACTTCAAACAAAGACAATGGATAGACATATCTTGCCACACTTTGAAGTACCAGCAGCATCATTCAGCGTGTTCTTGATTATTGCTTTAACAATCTGGATTACTTTCTATGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGGAAGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGGTTAACAGTCTCTTGTATGTCTATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATCACAGAAGGGCATGAGGACGACCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGGATAGCTGAGGCTACCCATGGAGTTGGACAGATTGAATTCTTCTACACTCTATTACCGAAAAGCATGGCCAGCATCGCGTCAGCTATGTACACTGTTGGAACTGCTGTGTCGAGTTTGATTGGAAGTATTCTGGTGAGTAGTGAGGATTGGCTTACATCAAGGGGAGGTAAAACGAGCTGGCTTTCTAGCAACATTAATAAGGGTCACCTGGATTACCATTTCTGGTTGCTTGCTTTAATGAGTTTTCTCAACTTGTTATATTTTCTATGGGTCTGCCGGTTTTATGAGACTGGGAATGATGAATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATGTTGTACTGCATTCTTGACAGTTAATTAAGTTAGATAATAAAGTGTTCTTATATGTTAAGACCTTTACAATCTTCATATAGTTTCATACATTCTGGATGAGTATGTCTCTGAACTTAACTTGTATTGAGTTGATAACTTTGAGTGTGCATAACTAGATACTTAAATTTGTATAAAATTAAACAAGTAGACATATAAATGTGTTCAATTAGAACAAACCTAAGATAAGAGGTTAAAGTAAAAAACGCGAACAAAGTTAAGTGACAGTCAATGACTTAAGTCTATATAAAATCTAACAAGTAAGCACATACATCTTGTGTGACAATTCACATCTATATAATGTCCTACGTGTAATATGTTCTACATAATTATAATGGTTGAAGTTAGAAAAAATATATTCTATAAAGGCATAATACATAGATATGACTTTAAAGTTTGAACATGCACAAGTAGACACTTAAACTTGTATAAAATTAAGAAAATGAACACATTAATCCTAAATGACATCCTATGTGTATCATGTCATGTAGGATATTTGTATCTATTTTTTCAATTTAATAATAATTTAAGTGTCTACTTGTGTACATTTAAAACTGAAAAACAATTGTTTGTTGACGTTAAGTTAAAAATCGTGTTTATTTATTATGTGTTTTATGAACAAACATAGATTTTGAAATTTCTTAACTAAAAAAAAAAAGAAG</genome_strand>
        <mrna_strand>GATGGTCCTGGGGTTTAGTGTTTTTTTCTCTCTCTCTTTTTGTGTCTGCTAATCATATATTAAAGCAAAGAAGAGAAGTGAAGAGGAAACAGAAAATAGCAGTGGAAATGGGCACTGAAATACAAGATGAAGTGAACACAAGAAAGGGTGGTCTTAGGACCATGCCATTCATCATTT...............................................................................................TGAATGAATCATTTGAAAGGATAGCAAGTTATGGTTCACAAACAAACATGATAATTTATTTGATGACATATTATAACATGAGTGCTGCTACTGGCACTAGTATTATTGGTATATGGGGTGCACTTTCAAGTGGATTGGCTATTGTTGGGGCGATTATTGCTGATTGTTATTGGGGTCGATATAATGCTGTTGCCTATGGAACCATCTTCACTTTTATT.................................................................................GGAATGGTTATTCTCTGGCTTACATCAATGATTCCGCAACTCACAACTTTGGCATGTTCTCATTTTCAACATGTTTGTAATGGACCAACAGCATTCCAGCTTGCTGTTCTGTCTACATCATTTGCGTTTACGTCTATCGGAGCTGGTTTTGTTAGACCTTGTTCTATAATGTTTGGTGCTGATCAATTGGAACAAAAAGGCAACCCTGAAAACAAGAAGATTGTTGAGAGCTATTTCAATTGGTACTATGCTAGCACAGGGGTTGCAACTATGATTGCAGTTACCGTTATTATTTATATTCAAGATCGTTATGGTTGGCAAATTGGCTTTGGTATCCCTGTTATACTCATGGTTTTGTCTGTCTCAACGTTCCTAATCGGTTCTTCTCTTTATATCAAAGTGAAACCCGATACAAACAACTTGCTATTAGGATTGTTCCAAGCAGGTGCAGCTGCTTTTAGAAAAAGGAAAACCCCTCTTTCATTGACTGGTTGTGATGACTACTATCATTCGCCATATGAAACAGAGGTCTTAACGCCATCAAAAGACTTCAG.....................................................................................GTGCTTAAATAGAGCTTGTATGATTGAAGATCCTGAAAGAGATTTGAATGCTGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACGAGTTGAATCACTCAAGGCTCTTATTAGAATAATTCCTATGTGGTCAGCCGGTTTTATGATGTTTGTAGACATGAATGTATTCGCATTTTCTGTACTTCAAACAAAGACAATGGATAGACATATCTTGCCACACTTTGAAGTACCAGCAGCATCATTCAGTGTGTTCTTGATTATTGCTTTAACAATCTGGATTACTTTCTATGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGGAAGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGGTTAACAGTCTCTTGTATGTCTATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATCACAGAAGGGCATGAGGACGACCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGGATAGCTGAGGCTACCCATGGAGTTGGACAGATTGAATTCTTCTACACTCTATTACCGAAAAGCATGGCCAGCATCGCGTCAGCTATGTACACTGTTGGAACTGCTGTGTCGAGTTTGATTGGAAGTATTCTGGTGAGTAGTGAGGATTGGCTTACATCAAGGGGAGGTAAAACGAGCTGGCTTTCTAGCAACATTAATAAGGGTCACCTGGATTACCATTTCTGGTTGCTTGCTTTAATGAGTTTTCTCAACTTGTTATATTTTCTATGGGTCTGCCGGTTTTATGAGACTGGGAATGATGAATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATGTTGTACTGCATTCTTGACAGTTAATTAAGTTAGATAATAAAGTGTTCTTATATGTTAAGACCTTTACAATCTTCAA...........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AACAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315829" ref_strand="-" ref_description="SGN-U315829        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr1:19438192-19442640 FORWARD | Aliases: F9I5.4, F9I5_4(evalue: 2e-48, score=189) genbank/nr: gi|15218183|ref|NP_175630.1| peptide transporter -related [Arabidopsis thaliana] gi|25405532|pir||H96561 probable peptide transporter [imported] - Arabidopsis thaliana gi|6850341|gb|AAF29404.1| peptide transporter, putative [Arabidopsis thaliana](evalue: 1e-46, score=189)">
      <seq>acgatcgtgttttggtccctttgctatcaaaatatactgaaggnccaagagggctaagtcctgttacccgaatgggaattgggttaacagtctcttgtatgtctatggcattgtcagcaataacagaaagcataagacgaaaaagggcaatagcggaagggcatgaagacgatccaaatgctttagtaaacatgtctgctatgtggttcgtgccacagtatgcactactcggaatagctgaggctacccatggagttggacagattgagtttttctacactctattaccgaaaagcatggcaagcatcgcgtcagctatgtacaccgttgggactgctgtgtcgagtttgactggaagtattctggtgagtagtgaagattggcttacatcaaggggaggtaaaacgagctggctttcgagcaacattaataagggtcacctggattaccatttctgggtgcttgcttctatgagttttctcaacctgctatattttctagttgtctgccggttttatgatactgggaaggatgagatgagtagatcacctcatgtggctgatgagaaagaatgcgattatagactcttacatgaatcttgatgatatattgtattgcatccttgaatgatccaacaactactaattgagttggacaataaagtttttcatatgttaagaaaaaaaaaaaaaaaaaactcagactagttctctct</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="35013" stop="36292"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="35313" g_stop="35992" g_length="680"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="680" r_length="680" r_score="0.996"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="681" polyA_stop="698"/>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U315829" ref_strand="-">
        <total_alignment_score>0.996</total_alignment_score>
        <cumulative_length_of_scored_exons>680</cumulative_length_of_scored_exons>
        <coverage percentage="0.951" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315829" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="35313" e_stop="35992"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ACGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGGAAGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGGTTAACAGTCTCTTGTATGTCTATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATAGCGGAAGGGCATGAAGACGATCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGAATAGCTGAGGCTACCCATGGAGTTGGACAGATTGAGTTTTTCTACACTCTATTACCGAAAAGCATGGCAAGCATCGCGTCAGCTATGTACACCGTTGGGACTGCTGTGTCGAGTTTGACTGGAAGTATTCTGGTGAGTAGTGAAGATTGGCTTACATCAAGGGGAGGTAAAACGAGCTGGCTTTCGAGCAACATTAATAAGGGTCACCTGGATTACCATTTCTGGGTGCTTGCTTCTATGAGTTTTCTCAACCTGCTATATTTTCTAGTTGTCTGCCGGTTTTATGATACTGGGAAGGATGAGATGAGTAGATCACCTCATGTGGCTGATGAGAAAGAATGCGATTATAGACTCTTACATGAATCTTGATGATATATTGTATTGCATCCTTGAATGATCCAACAACTACTAATTGAGTTGGACAATAAAGTTTTTCATATGTTAAGA</genome_strand>
        <mrna_strand>ACGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGAAGGNCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGGTTAACAGTCTCTTGTATGTCTATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATAGCGGAAGGGCATGAAGACGATCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGAATAGCTGAGGCTACCCATGGAGTTGGACAGATTGAGTTTTTCTACACTCTATTACCGAAAAGCATGGCAAGCATCGCGTCAGCTATGTACACCGTTGGGACTGCTGTGTCGAGTTTGACTGGAAGTATTCTGGTGAGTAGTGAAGATTGGCTTACATCAAGGGGAGGTAAAACGAGCTGGCTTTCGAGCAACATTAATAAGGGTCACCTGGATTACCATTTCTGGGTGCTTGCTTCTATGAGTTTTCTCAACCTGCTATATTTTCTAGTTGTCTGCCGGTTTTATGATACTGGGAAGGATGAGATGAGTAGATCACCTCATGTGGCTGATGAGAAAGAATGCGATTATAGACTCTTACATGAATCTTGATGATATATTGTATTGCATCCTTGAATGATCCAACAACTACTAATTGAGTTGGACAATAAAGTTTTTCATATGTTAAGA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U318735" ref_strand="+" ref_description="SGN-U318735        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: AT5G65550.1 | Symbol: None | UDP-glucoronosyl/UDP-glucosyl transferase family protein, contains Pfam profile: PF00201 UDP-glucoronosyl and UDP-glucosyl transferase ;similar to flavonol 3-O-glucosyltransferase (anthocyanin rhamnosyl transferase) from Petunia hybrida (SP:Q43716) | chr5:26215530-26217053 REVERSE | Aliases: K21L13.6, K21L13_6 (evalue: 2e-49, score=193) genbank/nr: gi|56550539|dbj|BAD77944.1| UDP-glucuronic acid:anthocyanin glucuronosyltransferase [Bellis perennis] (evalue: 4e-86, score=321)">
      <seq>agagaaaatcaaagaactaaagcatacaatgagtactactttaaaggtattgatgttcccatttttggcttatggacacatatctccatatctaaacgtagctaagaagcttgcggacagaggattcttgatttacttgtgttcaacaccgataaatctcaaatccaccatcaacaaaatccccgaaaagtatgctgattcgattcagcttatcgaacttcacttaccagaattacccgaacttcctcctcattaccataccaccaatggtctcccacccaatctcaatcacatccttcgtagagccctgaaaatgtcgaaaccaaacttctcgaaaatcatgcaaaatctgaaacctgatttgttgatttacgacatattgcagcaatgggctgaagatgtggctactgaactaaacattccagcagttaagcttttgacttcgggtgttgctgtgttttcgtattttttcaacttaacgaagaaaccagaggttgaattcccttaccctgctatttatctcaggaaaattgagctagttagatggtgtgaaacgttgtcaaaacataacaaagagggagaagaacatgatgatggtttagcttatggaaatatgcaaatcatgttgatgagtacttctaaaattttagaagccaaatatattgattattgcattgaactgacaaattggaaagttgttccagttggttcactagttcaagattcaatcactaatgacgcggcggacgatgacatggagttaatagattggctaggaacaaaagatgagaattcaactgttttcgtctcctttgggagtgagtatttcttgtcaaaagaagatgtggaagaagtagctttcgggttggagttaagtaatgttaatttcatatgggttgtaagatttccgaaaggtgaagagaaaaatcttgaagatgtattaccaaaaggtttttttgaaagaattggagagaggggaagagttttggacaaatttgcaccacaaccaagaattctaaatcatccgagtacgggaggatttataagtcattgtggttggaattcagcgatggaaagtatagattttggggtacctatagttgccatgcctatgcaacttgatcaaccaatgaatgctaggttgatagtagaattgggagtcgcagttgagattgttagagatgatgatggaaaaatttacagaggagaaatcgcggaaactcttaaaggtgtcataacgggggaaattggggaaatttt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="37150" stop="39009"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="37450" g_stop="38709" g_length="1260"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1260" r_length="1260" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U318735" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1260</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U318735" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="37450" e_stop="38709"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGAGAAAATCAAAGAACTAAAGCATACAATGAGTACTACTTTAAAGGTATTGATGTTCCCATTTTTGGCTTATGGACACATATCTCCATATCTAAACGTAGCTAAGAAGCTTGCGGACAGAGGATTCTTGATTTACTTGTGTTCAACACCGATAAATCTCAAATCCACCATCAACAAAATCCCCGAAAAGTATGCTGATTCGATTCAGCTTATCGAACTTCACTTACCAGAATTACCCGAACTTCCTCCTCATTACCATACCACCAATGGTCTCCCACCCAATCTCAATCACATCCTTCGTAGAGCCCTGAAAATGTCGAAACCAAACTTCTCGAAAATCATGCAAAATCTGAAACCTGATTTGTTGATTTACGACATATTGCAGCAATGGGCTGAAGATGTGGCTACTGAACTAAACATTCCAGCAGTTAAGCTTTTGACTTCGGGTGTTGCTGTGTTTTCGTATTTTTTCAACTTAACGAAGAAACCAGAGGTTGAATTCCCTTACCCTGCTATTTATCTCAGGAAAATTGAGCTAGTTAGATGGTGTGAAACGTTGTCAAAACATAACAAAGAGGGAGAAGAACATGATGATGGTTTAGCTTATGGAAATATGCAAATCATGTTGATGAGTACTTCTAAAATTTTAGAAGCCAAATATATTGATTATTGCATTGAACTGACAAATTGGAAAGTTGTTCCAGTTGGTTCACTAGTTCAAGATTCAATCACTAATGACGCGGCGGACGATGACATGGAGTTAATAGATTGGCTAGGAACAAAAGATGAGAATTCAACTGTTTTCGTCTCCTTTGGGAGTGAGTATTTCTTGTCAAAAGAAGATGTGGAAGAAGTAGCTTTCGGGTTGGAGTTAAGTAATGTTAATTTCATATGGGTTGTAAGATTTCCGAAAGGTGAAGAGAAAAATCTTGAAGATGTATTACCAAAAGGTTTTTTTGAAAGAATTGGAGAGAGGGGAAGAGTTTTGGACAAATTTGCACCACAACCAAGAATTCTAAATCATCCGAGTACGGGAGGATTTATAAGTCATTGTGGTTGGAATTCAGCGATGGAAAGTATAGATTTTGGGGTACCTATAGTTGCCATGCCTATGCAACTTGATCAACCAATGAATGCTAGGTTGATAGTAGAATTGGGAGTCGCAGTTGAGATTGTTAGAGATGATGATGGAAAAATTTACAGAGGAGAAATCGCGGAAACTCTTAAAGGTGTCATAACGGGGGAAATTGGGGAAATTTT</genome_strand>
        <mrna_strand>AGAGAAAATCAAAGAACTAAAGCATACAATGAGTACTACTTTAAAGGTATTGATGTTCCCATTTTTGGCTTATGGACACATATCTCCATATCTAAACGTAGCTAAGAAGCTTGCGGACAGAGGATTCTTGATTTACTTGTGTTCAACACCGATAAATCTCAAATCCACCATCAACAAAATCCCCGAAAAGTATGCTGATTCGATTCAGCTTATCGAACTTCACTTACCAGAATTACCCGAACTTCCTCCTCATTACCATACCACCAATGGTCTCCCACCCAATCTCAATCACATCCTTCGTAGAGCCCTGAAAATGTCGAAACCAAACTTCTCGAAAATCATGCAAAATCTGAAACCTGATTTGTTGATTTACGACATATTGCAGCAATGGGCTGAAGATGTGGCTACTGAACTAAACATTCCAGCAGTTAAGCTTTTGACTTCGGGTGTTGCTGTGTTTTCGTATTTTTTCAACTTAACGAAGAAACCAGAGGTTGAATTCCCTTACCCTGCTATTTATCTCAGGAAAATTGAGCTAGTTAGATGGTGTGAAACGTTGTCAAAACATAACAAAGAGGGAGAAGAACATGATGATGGTTTAGCTTATGGAAATATGCAAATCATGTTGATGAGTACTTCTAAAATTTTAGAAGCCAAATATATTGATTATTGCATTGAACTGACAAATTGGAAAGTTGTTCCAGTTGGTTCACTAGTTCAAGATTCAATCACTAATGACGCGGCGGACGATGACATGGAGTTAATAGATTGGCTAGGAACAAAAGATGAGAATTCAACTGTTTTCGTCTCCTTTGGGAGTGAGTATTTCTTGTCAAAAGAAGATGTGGAAGAAGTAGCTTTCGGGTTGGAGTTAAGTAATGTTAATTTCATATGGGTTGTAAGATTTCCGAAAGGTGAAGAGAAAAATCTTGAAGATGTATTACCAAAAGGTTTTTTTGAAAGAATTGGAGAGAGGGGAAGAGTTTTGGACAAATTTGCACCACAACCAAGAATTCTAAATCATCCGAGTACGGGAGGATTTATAAGTCATTGTGGTTGGAATTCAGCGATGGAAAGTATAGATTTTGGGGTACCTATAGTTGCCATGCCTATGCAACTTGATCAACCAATGAATGCTAGGTTGATAGTAGAATTGGGAGTCGCAGTTGAGATTGTTAGAGATGATGATGGAAAAATTTACAGAGGAGAAATCGCGGAAACTCTTAAAGGTGTCATAACGGGGGAAATTGGGGAAATTTT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U315832" ref_strand="+" ref_description="SGN-U315832        Tomato 200607 #1 [3 ESTs aligned] arabidopsis/peptide: | Symbol: None | proton-dependent oligopeptide transport (POT) family protein, contains Pfam profile: PF00854 POT family | chr1:19438192-19442640 FORWARD | Aliases: F9I5.4, F9I5_4(evalue: 6e-49, score=190) genbank/nr: TGF-beta(evalue: 1e-47, score=192)">
      <seq>agcttttaggaaaagaaatacccgtctttcatcgactaactatgatgaattgtatcgttggccacttgaatcagaggtcttgcctccatcaaaggactttaggtgtttaaatagagcttgcataattgaagatcctcaacgagatttgaatcccgatggatcagcttcaaatccatggaatctgtgtagtgtggaacaagttgaatcactcaaagctcttattaaagcacttcctatgtggtctacctgtttcatgattttcgtggatatgaatatattttcattttccttgcttcaaaccaagacgatggatagacacatcttccctcacttacaagtaccagcagcatcattcagtgtgtttatgattactgctttaacaatctggattgctttctacgaccgtgttttgatccctttgctatcaaaatatactggacagcctagagggctaagtcctgttaccagaatggggattgggttaatagcttccggtatgtctattgcattgtcagcaataacagaaagcataagacgacaaagggcaatagaggaaggacatgaggacgatccaaatgctttagtgaacatgtctgctatgtggttcgtgccacagtatgcactactc</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="40413" stop="41712"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="40713" g_stop="40814" g_length="102"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="102" r_length="102" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="40815" i_stop="40886" i_length="72">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="40887" g_stop="41412" g_length="526"/>
          <reference_exon_boundary r_type="cDNA" r_start="103" r_stop="628" r_length="526" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U315832" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>628</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U315832" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="40713" e_stop="40814"/>
          <exon e_start="40887" e_stop="41412"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AGCTTTTAGGAAAAGAAATACCCGTCTTTCATCGACTAACTATGATGAATTGTATCGTTGGCCACTTGAATCAGAGGTCTTGCCTCCATCAAAGGACTTTAGGTCAGTGACACCTTTTTCCATTGCTATATGATATTGCAGTTCACTTTAATACGTTTTTATTGTATGCTATAGGTGTTTAAATAGAGCTTGCATAATTGAAGATCCTCAACGAGATTTGAATCCCGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACAAGTTGAATCACTCAAAGCTCTTATTAAAGCACTTCCTATGTGGTCTACCTGTTTCATGATTTTCGTGGATATGAATATATTTTCATTTTCCTTGCTTCAAACCAAGACGATGGATAGACACATCTTCCCTCACTTACAAGTACCAGCAGCATCATTCAGTGTGTTTATGATTACTGCTTTAACAATCTGGATTGCTTTCTACGACCGTGTTTTGATCCCTTTGCTATCAAAATATACTGGACAGCCTAGAGGGCTAAGTCCTGTTACCAGAATGGGGATTGGGTTAATAGCTTCCGGTATGTCTATTGCATTGTCAGCAATAACAGAAAGCATAAGACGACAAAGGGCAATAGAGGAAGGACATGAGGACGATCCAAATGCTTTAGTGAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTC</genome_strand>
        <mrna_strand>AGCTTTTAGGAAAAGAAATACCCGTCTTTCATCGACTAACTATGATGAATTGTATCGTTGGCCACTTGAATCAGAGGTCTTGCCTCCATCAAAGGACTTTAG........................................................................GTGTTTAAATAGAGCTTGCATAATTGAAGATCCTCAACGAGATTTGAATCCCGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACAAGTTGAATCACTCAAAGCTCTTATTAAAGCACTTCCTATGTGGTCTACCTGTTTCATGATTTTCGTGGATATGAATATATTTTCATTTTCCTTGCTTCAAACCAAGACGATGGATAGACACATCTTCCCTCACTTACAAGTACCAGCAGCATCATTCAGTGTGTTTATGATTACTGCTTTAACAATCTGGATTGCTTTCTACGACCGTGTTTTGATCCCTTTGCTATCAAAATATACTGGACAGCCTAGAGGGCTAAGTCCTGTTACCAGAATGGGGATTGGGTTAATAGCTTCCGGTATGTCTATTGCATTGTCAGCAATAACAGAAAGCATAAGACGACAAAGGGCAATAGAGGAAGGACATGAGGACGATCCAAATGCTTTAGTGAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTC</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U338087" ref_strand="+" ref_description="SGN-U338087        Tomato 200607 #1 [1 ESTs aligned]">
      <seq>atttttcagagagagtttttcagcagctaaaagagagaaaaaagagagaaattcgcagtcaaaaatccagccataacaaccaacttcaaattgcgattcccgcttcgtttcttgtccgattgagctgatttttggacagcatattatcttcatctcaatctttgattaggaactgacagagttggatttggtggtctgcagcttcagttttgctgtcgtgaacagtagctgcgaaattggtgattttgctcctttaattctctagatttggagcaatcttattttgttgttgctcgttgtttgacactttgttttgtggccaattttggagaacaatattgtaactcttggtgattatagtggagcttttggacccgtggttttttactcttcacatcgaaggggtttccacgtaaatcttgatg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="56923" stop="57947"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="57223" g_stop="57647" g_length="425"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="425" r_length="425" r_score="0.981"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U338087" ref_strand="+">
        <total_alignment_score>0.981</total_alignment_score>
        <cumulative_length_of_scored_exons>425</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U338087" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="57223" e_stop="57647"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>ATTTTTCAGAGAGAGTTTTTCAGCAGCCAAAAGAGAGAAAAAAGAGAGAAATTCGCAGTAAAAAATCCAGCCATAACAACCAACTTCAAATTGTGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGCATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGTCTGCAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAATCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTTGTTTTGTGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGTCCCGTGGTTTTTTACTCTTCACATCGAAGGGCTTTCCACGTAAATCTTGGTG</genome_strand>
        <mrna_strand>ATTTTTCAGAGAGAGTTTTTCAGCAGCTAAAAGAGAGAAAAAAGAGAGAAATTCGCAGTCAAAAATCCAGCCATAACAACCAACTTCAAATTGCGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGCATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGTCTGCAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGAGCAATCTTATTTTGTTGTTGCTCGTTGTTTGACACTTTGTTTTGTGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGACCCGTGGTTTTTTACTCTTCACATCGAAGGGGTTTCCACGTAAATCTTGATG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U322072" ref_strand="+" ref_description="SGN-U322072        Tomato 200607 #1 [8 ESTs aligned] arabidopsis/peptide: | Symbol: None | GCN5-related N-acetyltransferase (GNAT) family protein, contains Pfam profile PF00583: acetyltransferase, GNAT family | chr1:8503766-8506784 REVERSE | Aliases: T23E23.19, T23E23_19(evalue: 1e-73, score=274) genbank/nr: N-acetyltransferase(evalue: 1e-71, score=274)">
      <seq>gttcagccactcccttcttcttcttcaatggctgctgcaatttctttatcattttctttagaccctcaaactcaacacaattaccatcatcgttttcaccataatactagcttcaattcacataaagcttcaatctttaccccaaaatatacattcccttttgtaatctcatcaaaatcacacacttcaaatctgattatcccactttcaacatcccaatcttcttcatcttcttcctcaacatctccatcatcagtcttccaaaccccacttcaaacaggtagatttctcacaaatcaagaacttgaaaagcttgaatctttagggaaatataggtattttcaagaattggaatctggatcattgtgggttcgtgtgatgagggaagaagaaatggatgttactgtttggttgttggctgagtctttttctgattctatgttgatgcctaaagggtatgtgaaattcatggcatatttagtgaagcagtatatgattgagagaagagcactaatgccttatactgctacacttcttggattctatagagaaaatggagaagatgcagatttgcaattggctggaactgtggaagtgtgttttgacaaaaggggtgctaatgctaattctcccacacctacacctcccaagaactctccatacatttgcaatatgacagtagataagctgcttaggagaaggggcataggttggcatctgttgaaagcaagcgaggaactaatttctcaaatgagttcttctagagaggtttacttgcactgtcgaatgattgatactgctccactcaacatgtatagaaaagctggatataccattgttgagacagacaacatttttatcttgttggcattgcagcgacggaagcacttgatgtggaaagtccttccagattcagaaagcctttctgaagttgatgaatgcacttcttcagtagacacgtgaacatgtaaacatagacaagttttgaggtggattctggtcttcgatttgccaatattctacaggtttatatatccctgaaaacaatcatgttgaactttataacatgcagaagctatatgcaactctgtgaagtaatatgatgcagcacaggcaatcacaatagcgtgataaacattgctgctctattaagaagatgaaggataatgaagaggctggaaacatacaaggatttagcatatcctcagacttgcttctcctacgtttgttccacgctgacaccaaaccaaaaggcatgataactgttctttctattgattcagatgctttcttgtgtgttcaatgatgtattacatttgataagacagtaaacattgatggagaaaaggatacaagtttctaagctgtagagaaattaatgagaagaaaacaaaacaactcgaaaactactgaataattatgcattaaaacagaaaaccagctgaaggagaaagaagaatgaaaaaatagatatagaagtatattggaaagaggagatggatagagttgtatgagaatcctgttggagtatgtacaaagcaagtgagaagtttagcttatgacaagtacttgacattttaacagcttgtttggatggttgttattacctattgtattctgtttttctgtttagttttaatataacgtttgttttaactgttactctgaatcgttttttttctccaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="57982" stop="63613"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="58282" g_stop="58979" g_length="698"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="698" r_length="698" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="58980" i_stop="59605" i_length="626">
            <donor d_prob="0.998" d_score="1.00"/>
            <acceptor a_prob="0.977" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="59606" g_stop="59896" g_length="291"/>
          <reference_exon_boundary r_type="cDNA" r_start="699" r_stop="989" r_length="291" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="59897" i_stop="62616" i_length="2720">
            <donor d_prob="0.972" d_score="1.00"/>
            <acceptor a_prob="0.969" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="62617" g_stop="63312" g_length="696"/>
          <reference_exon_boundary r_type="cDNA" r_start="990" r_stop="1685" r_length="696" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1686" polyA_stop="1697"/>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U322072" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1685</cumulative_length_of_scored_exons>
        <coverage percentage="0.993" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U322072" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="58282" e_stop="58979"/>
          <exon e_start="59606" e_stop="59896"/>
          <exon e_start="62617" e_stop="63312"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GTTCAGCCACTCCCTTCTTCTTCTTCAATGGCTGCTGCAATTTCTTTATCATTTTCTTTAGACCCTCAAACTCAACACAATTACCATCATCGTTTTCACCATAATACTAGCTTCAATTCACATAAAGCTTCAATCTTTACCCCAAAATATACATTCCCTTTTGTAATCTCATCAAAATCACACACTTCAAATCTGATTATCCCACTTTCAACATCCCAATCTTCTTCATCTTCTTCCTCAACATCTCCATCATCAGTCTTCCAAACCCCACTTCAAACAGGTAGATTTCTCACAAATCAAGAACTTGAAAAGCTTGAATCTTTAGGGAAATATAGGTATTTTCAAGAATTGGAATCTGGATCATTGTGGGTTCGTGTGATGAGGGAAGAAGAAATGGATGTTACTGTTTGGTTGTTGGCTGAGTCTTTTTCTGATTCTATGTTGATGCCTAAAGGGTATGTGAAATTCATGGCATATTTAGTGAAGCAGTATATGATTGAGAGAAGAGCACTAATGCCTTATACTGCTACACTTCTTGGATTCTATAGAGAAAATGGAGAAGATGCAGATTTGCAATTGGCTGGAACTGTGGAAGTGTGTTTTGACAAAAGGGGTGCTAATGCTAATTCTCCCACACCTACACCTCCCAAGAACTCTCCATACATTTGCAATATGACAGTAGATAAGCTGCTTAGGAGGTATCGTTTAACTGCTCTCTCCGTTTCATGTATATTACTTTTTTTTTAGTCTGTTCAAAAGAATGTCTCTTTCCCCTTTTTTAGTCACCTCACACGTTAAACAACAAGATTCAAAATTTCTCGAAACTTTCATAAAATCCGTGCCAAGTCAAGAGTAAAGAAAGAAATTGAAATAGAGGGAGTACTTGTTTCTTGTGTTAATTCCCAATTGATATAGTATCAGTTCTCTATCTCAATCAACATATTGATGATGGGGAAAATTAGTTAATCAAGTTGAGGTAAGGTATAACGCCGAATCTGACTCTGGTGTACTATTCAACTAATTGGTTGTGGTTGACTTGTTATATGTGCTTTTTTTTTTTGGTGTGTGTGTGTCTGTATATATGTGTAATTAACTTGTCAAATATATGCCTTGAGAGTGCAGAAGTGATTTTCAAGAGTCTACATGGATTCGCAAGAGATCATTCTCTGGCTGTATATGTCCTCCTTCCCAATGTCTTTTTCTGTTTGAACTTTTGACATACTTGCATAGGAAAAGTTGATGAATGTAATGTCATTCTTATTGGAAGAGTATATGGATGATGGACTAGTATTGAGTTCCGATATTTGTTATTATCATTTTCCAGAAGGGGCATAGGTTGGCATCTGTTGAAAGCAAGCGAGGAACTAATTTCTCAAATGAGTTCTTCTAGAGAGGTTTACTTGCACTGTCGAATGATTGATACTGCTCCACTCAACATGTATAGAAAAGCTGGATATACCATTGTTGAGACAGACAACATTTTTATCTTGTTGGCATTGCAGCGACGGAAGCACTTGATGTGGAAAGTCCTTCCAGATTCAGAAAGCCTTTCTGAAGTTGATGAATGCACTTCTTCAGTAGACACGTGAACATGTAAACATAGACAAGTTTTGAGGTACATTATTTTCCATGGTCAAGCCCTTTTTCATTCTTTAGGATCTATCTGTAGTCTATTGTACTGTGTTGTTTGTACATGTACATAATCAAACTTGATTTAGCTTTTTGTTTTCCTTTTTATAACCTGAATTGGAGCTGAAACTTATATTAAACTTTACTATTGTATTTGTGATGAACTCATGAATCATTACTCCTTAATCTTCAATAATTTGAACAAGAATGCGTCTGTTTTTACACCGGGGTGATAGCTGTCTTCAGCTTTGTGTGTGTGTATGTAGTATCATCAGAGGTTAACTTTTCCAGGGAATATAACAAACTTAAATATATCTGTTTTGAAAGCAAAGCAGCCAAGTGAAGTCTTAGTTTTCATTCTTTGATATGCGAGGATGAAACATCATAAGAAGTGGCAAATATATGTGTACATAGTCAAATCTCTGCACTAACGTGTAATCTTTGATACGTCCTTGTTTTTCTCAGACTCGTCCAGGCTATTATTAAATTATTAAGAAAATTTGAGATCTTTCGGTTGAATCTGGGTTGTGTTCTTTTATTACTTTGACAACTTACTATATCCTACCATTCTCATTGCTCTTTCCAATGTACACTTGAAACTTTTAGCTGATATTTCAACTTCTGAATTTGAAGAATGCTTCTTGGTGCATGTTGATAAGATTTTGTGTCATCCATGTCAATCTGAGAAGGTCTCAGATCATTCTGAACGTATGCATAGTCATGTTTAGCCCTTTCGCATTTGTGTGGAGGATCAGCTGAAGTTCTTTGATGCAGTCTACCATTAAGGGTCTTTCGCTACTGTCGGTTCTCACACAGCGAGATGCTAGGTTAGCAAACATGGTGATAGACTCCATTGTGTATGAGTTCCTGCTAATCTCAGGGTCAATCACCTTACGCAGCTTCTTCTTATCATTCAAAATATGTCTCACCTGCGGTATCATCAAAGAAGTGGATGTCAACTAGTGAAAAGATTTCCAAAGATATTTCATTTTTTGAACACTTCTCCTATATGATGCTTTTTTCGTCATTACCTGTAGTACTAAATTCTGATCACTTGGTCCAAGGGTGAGGTCCACAGCCCTGCGTCCGGTTAAAAGCTCCAACATAACAACACCAAATGCATAAACATCACTTTGTAAAGTGAGTTTTCCAGTCTGTTCGAAAATAATATTAGCAAGGTTTTTCTGAAAGAAATGTTAATGAAGAATAACTTTTCTCTTCTATCTATACAATATTTATATCACAAGAATAAAGGATGAGGTAAGAAATTTCTTGACAGTCATTCACATGTATGTTTGCAACAGAATTCAAGTAAAACTAGTCGTAATTCCTTCTAGCAGGTAGAACGTTAATATTATTTGTTTTGAAAGAAGAAAGAAAAGGCTGACCTATGCATATCTGTGTGTATTTACGGCAGGAAGTAGAGGAAGGGCGTTGAACATTATTTAAATTGACATTTAGCATCAGCATATATGATTACTGCTTTTGTGTAGTAACACTTTGGATAGTTTTTTTTCTCTTTATACTCTCTTCATCATTCTTGTGTTATGGCTTTGTTTCACTTGTTTCCTTTTTTCTTTGCTCACATTATTTGTTTGTCGTAATGAACTAAATAACAATATGATATCCAAATTAATAGAAACTTCAGACTTAGATTTGATATGCAAGCAACTCACCAGTGTATATTCAGGGTCAAAATAGCCGAAAGTACCAAGTACCCTAGATGTCACACATGATTGTTGCCCTTCTGGCATCAACTTTGCTAGTCCAAAATCTGATATCTGTGCAGCAGAAGAGTATTGATTATCTAGTAGGATGTGTTTCATGAGAAGGAAAACATTTCCGCTGCATGAGTATTGATTATCTATTAGGGTGTGCTTGGTATGAAGGGAAACATTTCCGAATTTTTTCCTTCATACCACACACACCCTTAGTTCTATGAAGAGATCCCCTCCTATAAAAAGATATGAAGAAAATTAGAATATATGAAATGTTGGAGTACCTTTGCATCATAATTAGTGTTCAAAAGAATATTGGTGGATTTGAAGTCCCTATGAATTATAGGAATTCCAACAGCTGAACTTGAATGCAGATATGCAAGTCCTCTTGCTGCCCCAAGAGCTACCTTTAGCCTTAAGGGCCAATCCATTTTCACTTCTGCAATCCCTGCAATTTCAGTGAGACATAGTTAGGCATCAAAAGGTAAGAGTGTTCGAATCAGGAAACTTCAGCTCGTAAACCAACCATTTAAATGATCTTGAAGGTTCCCCTTGTGCATGTACTCATAGACTAGAAATCTGTGCTTTCCATCTGCACAATAGCCTATTAGTGATACCAGATTAGGATGATCCAGTCTGCTCAGAATATCGACTTCCACACGAAACTCACGCTCGCCTTCTGCTTCCTTGAATGAAGGTAGATCCATTTTCTTTATTGCTACAATCTATCAATTGGCAAAACAATCAAAGTCTATATTAGTTGATCTGCTTTCTCAAGTTTCCAGTGTTACAGTAGATGAAAATAAACGACCAATCTGAAACTCTCTCCCTTAACTTGTTTGTCTTACCTCTCCAGACCGCAGTGTACCCTTATAAACTCGACCAAATCCTCCTTTTCCAAGTAGATTGTCATCACTAAAAGAATTTGTTGCCTCCTCCATTTCTCTGAGTGTGAAGACTGATGATCCATGGCGTCTTTTTGCTGCAGGTGGATTCTGGTCTTCGATTTGCCAATATTCTACAGGTTTATATATCCCTGAAAACAATCATGTTGAACTTTATAACATGCAGAAGCTATATGCAACTCTGTGAAGTAATATGATGCAGCACAGGCAATCACAATAGCGTGATAAACATTGCTGCTCTATTAAGAAGATGAAGGATAATGAAGAGGCTGGAAACATACAAGGATTTAGCATATCCTCAGACTTGCTTCTCCTACGTTTGTTCCACGCTGACACCAAACCAAAAGGCATGATAACTGTTCTTTCTATTGATTCAGATGCTTTCTTGTGTGTTCAATGATGTATTACATTTGATAAGACAGTAAACATTGATGGAGAAAAGGATACAAGTTTCTAAGCTGTAGAGAAATTAATGAGAAGAAAACAAAACAACTCGAAAACTACTGAATAATTATGCATTAAAACAGAAAACCAGCTGAAGGAGAAAGAAGAATGAAAAAATAGATATAGAAGTATATTGGAAAGAGGAGATGGATAGAGTTGTATGAGAATCCTGTTGGAGTATGTACAAAGCAAGTGAGAAGTTTAGCTTATGACAAGTACTTGACATTTTAACAGCTTGTTTGGATGGTTGTTATTACCTATTGTATTCTGTTTTTCTGTTTAGTTTTAATATAACGTTTGTTTTAACTGTTACTCTGAATCGTTTTTTTTCTCCA</genome_strand>
        <mrna_strand>GTTCAGCCACTCCCTTCTTCTTCTTCAATGGCTGCTGCAATTTCTTTATCATTTTCTTTAGACCCTCAAACTCAACACAATTACCATCATCGTTTTCACCATAATACTAGCTTCAATTCACATAAAGCTTCAATCTTTACCCCAAAATATACATTCCCTTTTGTAATCTCATCAAAATCACACACTTCAAATCTGATTATCCCACTTTCAACATCCCAATCTTCTTCATCTTCTTCCTCAACATCTCCATCATCAGTCTTCCAAACCCCACTTCAAACAGGTAGATTTCTCACAAATCAAGAACTTGAAAAGCTTGAATCTTTAGGGAAATATAGGTATTTTCAAGAATTGGAATCTGGATCATTGTGGGTTCGTGTGATGAGGGAAGAAGAAATGGATGTTACTGTTTGGTTGTTGGCTGAGTCTTTTTCTGATTCTATGTTGATGCCTAAAGGGTATGTGAAATTCATGGCATATTTAGTGAAGCAGTATATGATTGAGAGAAGAGCACTAATGCCTTATACTGCTACACTTCTTGGATTCTATAGAGAAAATGGAGAAGATGCAGATTTGCAATTGGCTGGAACTGTGGAAGTGTGTTTTGACAAAAGGGGTGCTAATGCTAATTCTCCCACACCTACACCTCCCAAGAACTCTCCATACATTTGCAATATGACAGTAGATAAGCTGCTTAGGAG..................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAGGGGCATAGGTTGGCATCTGTTGAAAGCAAGCGAGGAACTAATTTCTCAAATGAGTTCTTCTAGAGAGGTTTACTTGCACTGTCGAATGATTGATACTGCTCCACTCAACATGTATAGAAAAGCTGGATATACCATTGTTGAGACAGACAACATTTTTATCTTGTTGGCATTGCAGCGACGGAAGCACTTGATGTGGAAAGTCCTTCCAGATTCAGAAAGCCTTTCTGAAGTTGATGAATGCACTTCTTCAGTAGACACGTGAACATGTAAACATAGACAAGTTTTGAG................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GTGGATTCTGGTCTTCGATTTGCCAATATTCTACAGGTTTATATATCCCTGAAAACAATCATGTTGAACTTTATAACATGCAGAAGCTATATGCAACTCTGTGAAGTAATATGATGCAGCACAGGCAATCACAATAGCGTGATAAACATTGCTGCTCTATTAAGAAGATGAAGGATAATGAAGAGGCTGGAAACATACAAGGATTTAGCATATCCTCAGACTTGCTTCTCCTACGTTTGTTCCACGCTGACACCAAACCAAAAGGCATGATAACTGTTCTTTCTATTGATTCAGATGCTTTCTTGTGTGTTCAATGATGTATTACATTTGATAAGACAGTAAACATTGATGGAGAAAAGGATACAAGTTTCTAAGCTGTAGAGAAATTAATGAGAAGAAAACAAAACAACTCGAAAACTACTGAATAATTATGCATTAAAACAGAAAACCAGCTGAAGGAGAAAGAAGAATGAAAAAATAGATATAGAAGTATATTGGAAAGAGGAGATGGATAGAGTTGTATGAGAATCCTGTTGGAGTATGTACAAAGCAAGTGAGAAGTTTAGCTTATGACAAGTACTTGACATTTTAACAGCTTGTTTGGATGGTTGTTATTACCTATTGTATTCTGTTTTTCTGTTTAGTTTTAATATAACGTTTGTTTTAACTGTTACTCTGAATCGTTTTTTTTCTCCA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U345705" ref_strand="+" ref_description="SGN-U345705        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: AT1G24030.1 | Symbol: None | protein kinase family protein, contains protein kinase domain, Pfam:PF00069; similar to protein kinase APK1A, SWISS-PROT:Q06548 (Arabidopsis thaliana) | chr1:8503242-8505449 FORWARD | Aliases: T23E23.18, T23E23_18 (evalue: 9e-35, score=130) genbank/nr: Protein(evalue: 6e-37, score=143)">
      <seq>gcaaatatatgtgtacatagtcaaatctctgcactaacgtgtaatctttgatacgtccttgtttttctcagactcgtccaggctattattaaattattaagaaaatttgagatctttcggttgaatctgggttgtgttcttttattactttgacaacttactatatcctaccattctcattgctctttccaatgtacacttgaaacttttagctgatatttcaacttctgaatttgaagaatgcttcttggtgcatgttgataagattttgtgtcatccatgtcaatctgagaaggtctcagatcattctgaacgtatgcatagtcatgtttagccctttcgcatttgtgtggaggatcagctgaagttctttgatgcagtctaccattaagggtctttcgctactgtcggttctcacacagcgagatgctaggttagcaaacatggtgatagactccattgtgtatgagttcctgctaatctcagggtcaatcaccttacgcagcttcttcttatcattcaaaatatgtctcacctgcggtatcatcaaagaagtggatgtcaactagtgaaaagatttccaaagatatttcattttttgaacacttctcctatatgatgcttttttcgtcattacctgtagtactaaattctgatcacttggtccaggggtgaggtccacagccctgcgtccggttaaaagctcccaacatacacaccaaatgcataaacatcactttgtaaagtgagttttccagt</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="60005" stop="61364"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="60305" g_stop="61064" g_length="760"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="759" r_length="759" r_score="0.993"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U345705" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>760</cumulative_length_of_scored_exons>
        <coverage percentage="1.001" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U345705" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="60305" e_stop="61064"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCAAATATATGTGTACATAGTCAAATCTCTGCACTAACGTGTAATCTTTGATACGTCCTTGTTTTTCTCAGACTCGTCCAGGCTATTATTAAATTATTAAGAAAATTTGAGATCTTTCGGTTGAATCTGGGTTGTGTTCTTTTATTACTTTGACAACTTACTATATCCTACCATTCTCATTGCTCTTTCCAATGTACACTTGAAACTTTTAGCTGATATTTCAACTTCTGAATTTGAAGAATGCTTCTTGGTGCATGTTGATAAGATTTTGTGTCATCCATGTCAATCTGAGAAGGTCTCAGATCATTCTGAACGTATGCATAGTCATGTTTAGCCCTTTCGCATTTGTGTGGAGGATCAGCTGAAGTTCTTTGATGCAGTCTACCATTAAGGGTCTTTCGCTACTGTCGGTTCTCACACAGCGAGATGCTAGGTTAGCAAACATGGTGATAGACTCCATTGTGTATGAGTTCCTGCTAATCTCAGGGTCAATCACCTTACGCAGCTTCTTCTTATCATTCAAAATATGTCTCACCTGCGGTATCATCAAAGAAGTGGATGTCAACTAGTGAAAAGATTTCCAAAGATATTTCATTTTTTGAACACTTCTCCTATATGATGCTTTTTTCGTCATTACCTGTAGTACTAAATTCTGATCACTTGGTCCAAGGGTGAGGTCCACAGCCCTGCGTCCGGTTAAAAGCT-CCAACATAACAACACCAAATGCATAAACATCACTTTGTAAAGTGAGTTTTCCAGT</genome_strand>
        <mrna_strand>GCAAATATATGTGTACATAGTCAAATCTCTGCACTAACGTGTAATCTTTGATACGTCCTTGTTTTTCTCAGACTCGTCCAGGCTATTATTAAATTATTAAGAAAATTTGAGATCTTTCGGTTGAATCTGGGTTGTGTTCTTTTATTACTTTGACAACTTACTATATCCTACCATTCTCATTGCTCTTTCCAATGTACACTTGAAACTTTTAGCTGATATTTCAACTTCTGAATTTGAAGAATGCTTCTTGGTGCATGTTGATAAGATTTTGTGTCATCCATGTCAATCTGAGAAGGTCTCAGATCATTCTGAACGTATGCATAGTCATGTTTAGCCCTTTCGCATTTGTGTGGAGGATCAGCTGAAGTTCTTTGATGCAGTCTACCATTAAGGGTCTTTCGCTACTGTCGGTTCTCACACAGCGAGATGCTAGGTTAGCAAACATGGTGATAGACTCCATTGTGTATGAGTTCCTGCTAATCTCAGGGTCAATCACCTTACGCAGCTTCTTCTTATCATTCAAAATATGTCTCACCTGCGGTATCATCAAAGAAGTGGATGTCAACTAGTGAAAAGATTTCCAAAGATATTTCATTTTTTGAACACTTCTCCTATATGATGCTTTTTTCGTCATTACCTGTAGTACTAAATTCTGATCACTTGGTCCAGGGGTGAGGTCCACAGCCCTGCGTCCGGTTAAAAGCTCCCAACAT-AC-ACACCAAATGCATAAACATCACTTTGTAAAGTGAGTTTTCCAGT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U316164" ref_strand="+" ref_description="SGN-U316164        Tomato 200607 #1 [31 ESTs aligned] arabidopsis/peptide: | Symbol: None | 30S ribosomal protein S13, chloroplast (CS13), ribosomal protein S13 precursor, chloroplast Arabidopsis thaliana, PIR:S59594; identical to cDNA ribosomal protein S13 GI:1515106 | chr5:4617653-4618900 REVERSE | Aliases: F18O22.110, F18O22_110(evalue: 6e-57, score=217) genbank/nr: gi|18417346|ref|NP_568299.1| 30S ribosomal protein S13, chloroplast precursor (CS13) [Arabidopsis thaliana] gi|1173194|sp|P42732|RR13_ARATH 30S ribosomal protein S13, chloroplast precursor (CS13) gi|2119093|pir||S59594 ribosomal protein S13 precursor, chloroplast - Arabidopsis thaliana gi|16767|emb|CAA79013.1| chloroplast 30S ribosomal protein S13 [Arabidopsis thaliana] gi|662869|emb|CAA88028.1| chloroplast ribosomal protein S13 [Arabidopsis thaliana] gi|1107483|emb|CAA63021.1| 30S ribosomal protein S13 [Arabidopsis thaliana] gi|1515107|emb|CAA60413.1| plastid ribosomal protein S13 [Arabidopsis thaliana] gi|14517397|gb|AAK62589.1| AT5g14320/F18O22_110 [Arabidopsis thaliana] gi|15450549|gb|AAK96452.1| AT5g14320/F18O22_110 [Arabidopsis thaliana](evalue: 5e-55, score=217)">
      <seq>aaaaatagaccagcaaaaggctctatcttcttccttcttcaatttcttcatcaatcaagattttcaacaatggcgcaaacactagcaactcctgtacttccttctctttcccttatctgcaacacatcttccatctccaagcacagttccctctctttttctactcccacatcttttccaaagactgcaggtttggttataaagtgtgtgcgtgtgggaggagtggaagttccaaacaacaaaagagttgagttctctttgcaatacattcatggaattggccgcaccactgcacgccagattctggtagaccttcaaatggagaacaaagtgatgaaagacatgtcggaagaggaacttatcactcttcgtgaagaagtctctaagtacatgattgaaggagaccttaggagattcaatgctcttgccattaggaggttgaaggagattcagtgctatagaggagtaaggcacatccaaggattgccttgcagaggacaacgaacaaagaacaattgccgtactttgaagggcaagaaagtagcaattgcagggaagaagaaggcacctcgttaaatcaagatcgatttttcatttcttttggtaactaacttgtaaaagttacactctatattcctatggcaaactgtgcatttgtttgttataaacagttttttccattgaaatcatttttctacatttcaagataagcttttcaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="-" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="66775" stop="13194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="66475" g_stop="66293" g_length="183"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="183" r_length="183" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="66292" i_stop="65906" i_length="387">
            <donor d_prob="0.999" d_score="1.00"/>
            <acceptor a_prob="0.980" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="65905" g_stop="65681" g_length="225"/>
          <reference_exon_boundary r_type="cDNA" r_start="184" r_stop="408" r_length="225" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="65680" i_stop="65067" i_length="614">
            <donor d_prob="0.993" d_score="1.00"/>
            <acceptor a_prob="0.888" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="65066" g_stop="64747" g_length="320"/>
          <reference_exon_boundary r_type="cDNA" r_start="409" r_stop="726" r_length="318" r_score="0.984"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="64746" i_stop="63253" i_length="1494">
            <donor d_prob="0.000" d_score="0.90"/>
            <acceptor a_prob="0.667" a_score="0.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="63252" g_stop="63236" g_length="17"/>
          <reference_exon_boundary r_type="cDNA" r_start="727" r_stop="743" r_length="17" r_score="0.706"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="-" ref_id="SGN-U316164" ref_strand="+">
        <total_alignment_score>0.993</total_alignment_score>
        <cumulative_length_of_scored_exons>745</cumulative_length_of_scored_exons>
        <coverage percentage="1.003" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U316164" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="66475" e_stop="66293"/>
          <exon e_start="65905" e_stop="65681"/>
          <exon e_start="65066" e_stop="64747"/>
          <exon e_start="63252" e_stop="63236"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AAAAATAGACCAGCAAAAGGCTCTATCTTCTTCCTTCTTCAATTTCTTCATCAATCAAGATTTTCAACAATGGCGCAAACACTAGCAACTCCTGTACTTCCTTCTCTTTCCCTTATCTGCAACACATCTTCCATCTCCAAGCACAGTTCCCTCTCTTTTTCTACTCCCACATCTTTTCCAAAGGTACACTTCACTCCCTTCTCTTGAAATTTGCAGTAATCAAACATGGAGTTTGCTGAAGTTTACATTTTTTGACCTTTTTCGTGTAGGAATTGGAATGGGGTTTGTCTTTTTTTTTCTCGCAATTTTCTCAGTAACCAAACATGGGTTTTGCTAAAGATTACTTTTTTTTTTACCTGAGTAGGAATTGGAATGAGTTTTTGGATTTTTCGAAATTTTCTCAGTAACCCAACATGAGTTTTTTTTGCTAAAGTTTCCGTTTTTTTGAGGTGGGATTGAATTGAGGTTTGCTTATTTTTCATATTTTTGGACTTTTTTGAGTTGGAATTAAATTGGGTTTTGCTAAATTTTCCATGATTTTGAGTTTGAACTGAAATGAGTTTTGTGTAGACTGCAGGTTTGGTTATAAAGTGTGTGCGTGTGGGAGGAGTGGAAGTTCCAAACAACAAAAGAGTTGAGTTCTCTTTGCAATACATTCATGGAATTGGCCGCACCACTGCACGCCAGATTCTGGTAGACCTTCAAATGGAGAACAAAGTGATGAAAGACATGTCGGAAGAGGAACTTATCACTCTTCGTGAAGAAGTCTCTAAGTACATGATTGAAGGAGACCTTGTGAGTTTCATTGCTCTAATTTGTACTCATTTGTTTTCGTTCCAATGTGCATATCCTTATTGAAACTTATATGCTTAGGTAATTTGATTTCGATATCTAGTTCATGTAACTTTGCTGTGGTTGCTGTTTATTTTAGCTCTATAGTTTAACTTAATGCCATTTGGGGTTCTAAGAAATTTAATTCATTTTGTCTCAAGATAGGAATTGAACCAAAAAAACAATATCTTAAACCAATCTTTGGTCCAACTTTTACATGGAAAGAACCATATTTGAGCTGAAACTGCATTCTACATATCTTGAGATTAAAACCAGAAGATCGAAAAATCTTCTTTACTTTCTTAAACTTTGTGTCAAGTCAAATCCGGACAAACAAATCGAAACAAGGGGAGTTATTGTTAGGTGGGTATGTAGGATCATGGCTTCTATATGCATCACAGCCTTATCCCAAATTAAACAGTTCTTATGGAAATGTATTTCAGAAGAAATCGATAGCTTGTTTAGCAATTGGCAATGTTGATTGAGATTCTTGTGTATAAGGTTGTTTGTTTGATTGATGCTTCGGCTTCCTATTTGAAACGGGAAAATTGATTACATACTTGTGGTGTTGGCATCAGAGGAGATTCAATGCTCTTGCCATTAGGAGGTTGAAGGAGATTCAGTGCTATAGAGGAGTAAGGCACATCCAAGGATTGCCTTGCAGAGGACAACGAACAAAGAACAATTGCCGTACTTTGAAGGGCAAGAAAGTAGCAATTGCAGGGAAGAAGAAGGCACCTCGTTAAATCAAGATCGATTTTTCATTTCTTTTGGTAACTAACTTGTAAAAGTTACACTCTATATTCCTATGGCAAACTGTGCATTTGTTTGTTATAAACAGTTTTTTCCATTGAAATCATTTTTCTACATTTCAAGATAAGAGCTTTTCAAGAAGAATGTTGATGCTTAGGCATAATCTCTTCCTTAAATCTTGTTAAATGTGTTTCATGTGGAGTAATTGCGAATTTACGTTATTCTGATTGGATGATTTGGTTGACAGGAGAAAGGTTTGTTAAGTTACGTTAGGTGTCATAATAATTGTTGATGTAACGACCTATGAAGTGCAGTCCCTATCTATGAGCCTTGGTTTAAGCTTCAAGTTCAGTAATGTGTTTGGGCCAAGTATTTGCATTAATGTGATACCAAAGTTTTACAATTTGAGTCATAGCATTGTTAATGTAATGACTCGTTAGGTCATTTTGAGAATTAACTAAAAGCATAGAGTTTGTGGCACCTTTTTGTCACATGCATGAGCATGAAAGTTAAGTCCCACCCCTTTAGTACTCAAGAAGGTTCACTTTTCTCAGGTTTCTTGAAGACCATGACTTCTGTTTTTCAATAGTGATGATGTTCAGATCAATTTACACGTATTTCACTACTTACTTGTTACCTCACACTAGCATTATTGACGACGATGTAGTCTCTATCATTTTCAATATTATCGCGACCCCAGAAGAACCTTCTAAGTTATCTTTTCTAAGGTTTCTGGAAGATTGTGCATTTAACTTGAAGAAAATCTTTGGTAGAGTTTTTCATTTTCAAGATTATCTTTGTATAACTAGTAAAGTTATTGACTTATTGTAATGTAACTACGAGGTCACGATTTTAAACTAACAAATTTGAATAGTTTAGGGAGAATTTGATGTATCAAGTCTTGCAAAATTAAGTTAGAATTAATGTTTCGAATTTTACAACTGAGACAACCTTTATCGATTCTAAGTACATAAAACTAAAACTGAATAAATAAATAAAAAGAATATACCAAGCATTCCAAAGTTTGCAACTTTTTTGTATGTAATATTTTCATTTCATACCTTCAACACATACTAATATTTCACCAGCCATAACTATAAGAAGAAAAATATACCAACAATACAAAATATGGATTTATGAACACTAAGTGTTACATCAATAGAACAGTAAAAACCAGAATTTTCAGGCAAAAAAATTATAGAAATCCAAGAAAATGACATCCCAACAAGAGCATTTTGCAAATTAAAGAGAATTTTATGTTTAAATTGCAGCTCCTATTTCCTTTTCAAGGCACACCCACCCACCTCACCCCACTTGATCATTTGAAGGTAAGCAACTTATTGTTCCATCTCTTGCTTTTTCTTACCCTTCAAGTGATGAGCCTTAAGTTGTTGAGTGATAACAGTGCTTACATTGTTTGGATGGTTGTTACGTATTGTTCTATAGCCTATCGTACTGTATTATTTTAACAAATACAATGTTTGGAGCGACCAGACCAGACCGTTTTCCGTTGCTACATGACAGGAAAGAACTTAAGGATAAAATAGAATTTTAAAATAGTAAGTAAAGACAAACAAATTGGAGAAAAAAAACGATTCAGAGTAACAGTTAAAACAAACGTTATATTAAAACTAAACAGAAAAACAGAATACAATA</genome_strand>
        <mrna_strand>AAAAATAGACCAGCAAAAGGCTCTATCTTCTTCCTTCTTCAATTTCTTCATCAATCAAGATTTTCAACAATGGCGCAAACACTAGCAACTCCTGTACTTCCTTCTCTTTCCCTTATCTGCAACACATCTTCCATCTCCAAGCACAGTTCCCTCTCTTTTTCTACTCCCACATCTTTTCCAAAG...................................................................................................................................................................................................................................................................................................................................................................................................ACTGCAGGTTTGGTTATAAAGTGTGTGCGTGTGGGAGGAGTGGAAGTTCCAAACAACAAAAGAGTTGAGTTCTCTTTGCAATACATTCATGGAATTGGCCGCACCACTGCACGCCAGATTCTGGTAGACCTTCAAATGGAGAACAAAGTGATGAAAGACATGTCGGAAGAGGAACTTATCACTCTTCGTGAAGAAGTCTCTAAGTACATGATTGAAGGAGACCTT......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AGGAGATTCAATGCTCTTGCCATTAGGAGGTTGAAGGAGATTCAGTGCTATAGAGGAGTAAGGCACATCCAAGGATTGCCTTGCAGAGGACAACGAACAAAGAACAATTGCCGTACTTTGAAGGGCAAGAAAGTAGCAATTGCAGGGAAGAAGAAGGCACCTCGTTAAATCAAGATCGATTTTTCATTTCTTTTGGTAACTAACTTGTAAAAGTTACACTCTATATTCCTATGGCAAACTGTGCATTTGTTTGTTATAAACAGTTTTTTCCATTGAAATCATTTTTCTACATTTCAAGAT-A-AGCTTTTCAAAAAAAAA......................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................AAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U336783" ref_strand="+" ref_description="SGN-U336783        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | Bet v I allergen family protein, similar to major pollen allergen Bet v 1 GB:CAA96544 GI:1321726 from (Betula pendula); contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family | chr1:8500466-8501504 REVERSE | Aliases: T23E23.28, T23E23_28(evalue: 4e-33, score=110) genbank/nr: gi|50924894|ref|XP_472791.1| OSJNBb0048E02.12 [Oryza sativa (japonica cultivar-group)] >gi|21741225|emb|CAD40936.1| OSJNBb0048E02.12 [Oryza sativa (japonica cultivar-group)] (evalue: 2e-28, score=119)">
      <seq>aatattgtaatctctcaatttaaaaaaaatgtcatccaatttaggaaaaattgatgttgaagttgaggtgaaaagtccagttgacaaattttggaatggcattagggactcaataaatttgttccccaaggcttcacctaatgaatacaagagcattgaagttgttgaaggtgatggcaagtctgttggttctgttctattgatcaaatatactgaagggtttccattggtgacattctcaaaagagaaaatagagtcaattgatgaggcaaataaaacattggtttattcagttattgatggtgaaaccttgaatactacaagagtttcaaaggcaccctaactgtgattccaaagggaaatggaagttttggtaagtgggtgtgtgaatttgaaagggcaatgatgaaattcctg</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="68121" stop="69771"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68421" g_stop="68638" g_length="218"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="218" r_length="218" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68639" i_stop="69270" i_length="632">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69271" g_stop="69471" g_length="201"/>
          <reference_exon_boundary r_type="cDNA" r_start="219" r_stop="417" r_length="199" r_score="0.965"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U336783" ref_strand="+">
        <total_alignment_score>0.983</total_alignment_score>
        <cumulative_length_of_scored_exons>419</cumulative_length_of_scored_exons>
        <coverage percentage="1.005" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U336783" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68421" e_stop="68638"/>
          <exon e_start="69271" e_stop="69471"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>AATATTGTAATCTCTCAATTTAAAAAAAATGTCATCCAATTTAGGAAAAATTGATGTTGAAGTTGAGGTGAAAAGTCCAGTTGACAAATTTTGGAATGGCATTAGGGACTCAATAAATTTGTTCCCCAAGGCTTCACCTAATGAATACAAGAGCATTGAAGTTGTTGAAGGTGATGGCAAGTCTGTTGGTTCTGTTCTATTGATCAAATATACTGAAGGTAATGTTCATGCATTGTTTCCTCATGTTTTAATTAATTTACGTGTCGTAACAGATAACTTATTTATTTTACAGATTTCAAATTCTCATTTTTTATGGATGGTTTGTCGGTTACTTGATCACTATACTACAAAAAAAATGGTCATTAGCAATAAAAACTAATCCAAAAAAACGTATTTTCTAATTTAATATCAAAAGACTTAAATTTTCTATATCTAAATTCACTATTAAATATTAGAAGTAACGAATCTCAAAATTCTGACTATGCCACATAGATTATAAAAGTTTAGAAGTACAAATCTCAAAATTCTTTGAATTCAGACTGTGCCACGTAATCTGAATTCACATAGTGACATGTTAAGTATATATAGTGTGACAAACCTGGATTGTAGTGCACTGGTGGAAGTGTTTCACTGTTAACCAGAGGTCTCATGTTCGAGCCCTGTGGATGAAGAAAATCTTGTTGGGAGTGTCACACCCGAACGGACTCTGCAGTGAGCGATCCAGAATTAGTCGGAGCTCCAATTCGGCCTCCGAACATCGATTGGAAAACCAAAAAAAAGTATATATACTCTGTTCTTTTGTTCTATTTTTCATTTTATTTTATAATTTCATTGTTTTTTTTTCATACAGGGTTTCCATTGGTGACATTCTCAAAAGAGAAAATAGAGTCAATTGATGAGGCAAATAAAACATTGGTTTATTCAGTTATTGATGGTGAAACCTTGAAATACTACAAGAGTTTCAAAGGCACCCTAACTGTGATTCCAAAGGGAAATGGAAGTTTGGTTAAGTGGTGTTGTGAATTTGAAAGGGCAAATGATGAAATTCCTG</genome_strand>
        <mrna_strand>AATATTGTAATCTCTCAATTTAAAAAAAATGTCATCCAATTTAGGAAAAATTGATGTTGAAGTTGAGGTGAAAAGTCCAGTTGACAAATTTTGGAATGGCATTAGGGACTCAATAAATTTGTTCCCCAAGGCTTCACCTAATGAATACAAGAGCATTGAAGTTGTTGAAGGTGATGGCAAGTCTGTTGGTTCTGTTCTATTGATCAAATATACTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCCATTGGTGACATTCTCAAAAGAGAAAATAGAGTCAATTGATGAGGCAAATAAAACATTGGTTTATTCAGTTATTGATGGTGAAACCTTG-AATACTACAAGAGTTTCAAAGGCACCCTAACTGTGATTCCAAAGGGAAATGGAAGTTTTGGTAAGTGGGTGTGTGAATTTGAAAGGGC-AATGATGAAATTCCTG</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319298" ref_strand="+" ref_description="SGN-U319298        Tomato 200607 #1 [11 ESTs aligned] arabidopsis/peptide: | Symbol: None | Bet v I allergen family protein, similar to major pollen allergen Bet v 1 GB:CAA96544 GI:1321726 from (Betula pendula); contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family | chr1:8500466-8501504 REVERSE | Aliases: T23E23.28, T23E23_28(evalue: 5e-47, score=184) genbank/nr: gi|21593946|gb|AAM65899.1| pollen allergen-like protein [Arabidopsis thaliana](evalue: 3e-45, score=184)">
      <seq>ctcaattaaaaaaaatgtcatccaatttaggaaaaattgatgttgaagttgaggtgaaaagtccagtagacaaattttggaatggcattatggactcaataaatttgttccccaaggcttcacctaatgaatacaagagcattgaagttgttgaaggtgatggcaagtctgttggttctgttctattgatcaaatatactgaagggtttccattggtgacattctcaaaagagaaaatagagtcaattgatgaggcaaataaaacattggtttattcagttattgatggtgaaaccttgaaatactacaagagtttcaaaggcagcctaactgttattccaaagggaaatggaagtttggttaagtggtgttgtgaatttgaaagggcaaatgatgaaattcctgagccacaaattattaaagaatttgctgtcaagaatttcaagaatcttgatgcttatctcattggggcataaaaagaccttatgacatatatgctatgtgatagaaattaataatcttcacatagtatatagtttcaatgaataaaattacttgcaggaatgtgagtagctactttacttttctcgtcatgtaagtgtaacaaaaacttgaataaataaaaccataatggggttaagaccttattactatgtaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="68134" stop="70024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68434" g_stop="68638" g_length="205"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="204" r_length="204" r_score="0.985"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="68639" i_stop="69270" i_length="632">
            <donor d_prob="0.996" d_score="1.00"/>
            <acceptor a_prob="1.000" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="69271" g_stop="69721" g_length="451"/>
          <reference_exon_boundary r_type="cDNA" r_start="205" r_stop="654" r_length="450" r_score="0.978"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="657" polyA_stop="672"/>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U319298" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>656</cumulative_length_of_scored_exons>
        <coverage percentage="0.976" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319298" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68434" e_stop="68638"/>
          <exon e_start="69271" e_stop="69721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>CTCAATTTAAAAAAAATGTCATCCAATTTAGGAAAAATTGATGTTGAAGTTGAGGTGAAAAGTCCAGTTGACAAATTTTGGAATGGCATTAGGGACTCAATAAATTTGTTCCCCAAGGCTTCACCTAATGAATACAAGAGCATTGAAGTTGTTGAAGGTGATGGCAAGTCTGTTGGTTCTGTTCTATTGATCAAATATACTGAAGGTAATGTTCATGCATTGTTTCCTCATGTTTTAATTAATTTACGTGTCGTAACAGATAACTTATTTATTTTACAGATTTCAAATTCTCATTTTTTATGGATGGTTTGTCGGTTACTTGATCACTATACTACAAAAAAAATGGTCATTAGCAATAAAAACTAATCCAAAAAAACGTATTTTCTAATTTAATATCAAAAGACTTAAATTTTCTATATCTAAATTCACTATTAAATATTAGAAGTAACGAATCTCAAAATTCTGACTATGCCACATAGATTATAAAAGTTTAGAAGTACAAATCTCAAAATTCTTTGAATTCAGACTGTGCCACGTAATCTGAATTCACATAGTGACATGTTAAGTATATATAGTGTGACAAACCTGGATTGTAGTGCACTGGTGGAAGTGTTTCACTGTTAACCAGAGGTCTCATGTTCGAGCCCTGTGGATGAAGAAAATCTTGTTGGGAGTGTCACACCCGAACGGACTCTGCAGTGAGCGATCCAGAATTAGTCGGAGCTCCAATTCGGCCTCCGAACATCGATTGGAAAACCAAAAAAAAGTATATATACTCTGTTCTTTTGTTCTATTTTTCATTTTATTTTATAATTTCATTGTTTTTTTTTCATACAGGGTTTCCATTGGTGACATTCTCAAAAGAGAAAATAGAGTCAATTGATGAGGCAAATAAAACATTGGTTTATTCAGTTATTGATGGTGAAACCTTGAAATACTACAAGAGTTTCAAAGGCACCCTAACTGTGATTCCAAAGGGAAATGGAAGTTTGGTTAAGTGGTGTTGTGAATTTGAAAGGGCAAATGATGAAATTCCTGAGCCACAAATCATTAAAGAATTTGCTGTCAAGAATTTCAAGAATCTTGATGCTTATCTCATTGGGGCATAAAAAGACCTTATGACATATATGCTATGTGATAGAAATTAATAATCTTCACATAGTATATAGTTTTTAATGAATAAAATTACGTGCAGGTATGTGAGTAGCTACTTTACTTTTCTAGTCATGTAAGTGTAATAAAAACTTGAATAAATAAAACTATAATGGGGTTAAGACCTTATTACTAT</genome_strand>
        <mrna_strand>CTCAA-TTAAAAAAAATGTCATCCAATTTAGGAAAAATTGATGTTGAAGTTGAGGTGAAAAGTCCAGTAGACAAATTTTGGAATGGCATTATGGACTCAATAAATTTGTTCCCCAAGGCTTCACCTAATGAATACAAGAGCATTGAAGTTGTTGAAGGTGATGGCAAGTCTGTTGGTTCTGTTCTATTGATCAAATATACTGAAG........................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................GGTTTCCATTGGTGACATTCTCAAAAGAGAAAATAGAGTCAATTGATGAGGCAAATAAAACATTGGTTTATTCAGTTATTGATGGTGAAACCTTGAAATACTACAAGAGTTTCAAAGGCAGCCTAACTGTTATTCCAAAGGGAAATGGAAGTTTGGTTAAGTGGTGTTGTGAATTTGAAAGGGCAAATGATGAAATTCCTGAGCCACAAATTATTAAAGAATTTGCTGTCAAGAATTTCAAGAATCTTGATGCTTATCTCATTGGGGCATAAAAAGACCTTATGACATATATGCTATGTGATAGAAATTAATAATCTTCACATAGTATATAG-TTTCAATGAATAAAATTACTTGCAGGAATGTGAGTAGCTACTTTACTTTTCTCGTCATGTAAGTGTAACAAAAACTTGAATAAATAAAACCATAATGGGGTTAAGACCTTATTACTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U319297" ref_strand="+" ref_description="SGN-U319297        Tomato 200607 #1 [2 ESTs aligned] arabidopsis/peptide: | Symbol: None | Bet v I allergen family protein, similar to major pollen allergen Bet v 1 GB:CAA96544 GI:1321726 from (Betula pendula); contains Pfam profile PF00407: Pathogenesis-related protein Bet v I family | chr1:8500466-8501504 REVERSE | Aliases: T23E23.28, T23E23_28(evalue: 2e-25, score=114) genbank/nr: gi|21593946|gb|AAM65899.1| pollen allergen-like protein [Arabidopsis thaliana](evalue: 1e-23, score=114)">
      <seq>tcaatttaaaaaaaatgtcatccaatttaggaaaaattgatgttgaagttgaggtgaaaagtccagttgacaaattttggaatggcattagggactcaataaatttgttccccaaggcttcacctaatgaatacaagagcattgaagttgttgaaggtgatggcaagtctgttggttctgttctattgatcaaatatactgaaggtaatgttcatgcattgtttcctcatgttttaattaatttacgtgtcgtaacagataacttatttattttacagatttcaaattctcattttttatggatggtttgtcggttacttgatcactatactacaaaaaaaatggtcattagcaataaaaactaatccaaaaaaacgtattttctaatttaatatcaaaagacttaaattttctatatctaaattcactattaaatattagaagtaacgaatctcaaaattctgactatgccacatagattataaaagtttagaagtacaaatctcaaaattctttgaattcagactgtgccacgtaatctgaattcacatagtgacatgttaagtatatatagtgtgacaaacctggattgtagtgcactggtggaagtgtttcactgttaaccagaggtctcatgttcgagccctgtggatgaagaaaatcttgttgggagtgtcacacccgaacggactctgcagtgagcgatccagaattagtcggagctccaattcggcctccgaacatcgattggaaaaccaaaaaaaagtatatatactctgttcttttgttctatttttcattttattttataatttcattgtttttttttcatacagggtttccattggtgacattctcaaaagagaaaatagagtcaattgatgaggcaaataaaacattggtttattcagttattgatggtgaaaccttgaaatactacaagagtttcaaaggcaccctaactgtgattccaaagggaaatggaagtttggttaagtggtgttgtgaatttgaaagggcaaatgatgaaattcctgagccacaaatcattaaagaatttgctgtcaagaatttcaagaatcttgatgcttatctcattggggcataaaaagaccttatgacatatatgctatgtgatagaaattaataatcttcacatagtatatagtttttaatgaataaaattacgtgcaggtatgtgagtagctactttacttttctagtcatgtaagtgtaataaaaacttgaataaataaaactataatggggttaagaccttattactatgtaaaaannannaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="+" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="68135" stop="70024"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="68435" g_stop="69721" g_length="1287"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="1287" r_length="1287" r_score="1.000"/>
        </exon>
      </exon-intron_info>
      <PPA_line polyA_start="1300" polyA_stop="1312"/>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="+" ref_id="SGN-U319297" ref_strand="+">
        <total_alignment_score>1.000</total_alignment_score>
        <cumulative_length_of_scored_exons>1287</cumulative_length_of_scored_exons>
        <coverage percentage="0.981" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="+"/>
        <rDNA rDNA_id="SGN-U319297" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="68435" e_stop="69721"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>TCAATTTAAAAAAAATGTCATCCAATTTAGGAAAAATTGATGTTGAAGTTGAGGTGAAAAGTCCAGTTGACAAATTTTGGAATGGCATTAGGGACTCAATAAATTTGTTCCCCAAGGCTTCACCTAATGAATACAAGAGCATTGAAGTTGTTGAAGGTGATGGCAAGTCTGTTGGTTCTGTTCTATTGATCAAATATACTGAAGGTAATGTTCATGCATTGTTTCCTCATGTTTTAATTAATTTACGTGTCGTAACAGATAACTTATTTATTTTACAGATTTCAAATTCTCATTTTTTATGGATGGTTTGTCGGTTACTTGATCACTATACTACAAAAAAAATGGTCATTAGCAATAAAAACTAATCCAAAAAAACGTATTTTCTAATTTAATATCAAAAGACTTAAATTTTCTATATCTAAATTCACTATTAAATATTAGAAGTAACGAATCTCAAAATTCTGACTATGCCACATAGATTATAAAAGTTTAGAAGTACAAATCTCAAAATTCTTTGAATTCAGACTGTGCCACGTAATCTGAATTCACATAGTGACATGTTAAGTATATATAGTGTGACAAACCTGGATTGTAGTGCACTGGTGGAAGTGTTTCACTGTTAACCAGAGGTCTCATGTTCGAGCCCTGTGGATGAAGAAAATCTTGTTGGGAGTGTCACACCCGAACGGACTCTGCAGTGAGCGATCCAGAATTAGTCGGAGCTCCAATTCGGCCTCCGAACATCGATTGGAAAACCAAAAAAAAGTATATATACTCTGTTCTTTTGTTCTATTTTTCATTTTATTTTATAATTTCATTGTTTTTTTTTCATACAGGGTTTCCATTGGTGACATTCTCAAAAGAGAAAATAGAGTCAATTGATGAGGCAAATAAAACATTGGTTTATTCAGTTATTGATGGTGAAACCTTGAAATACTACAAGAGTTTCAAAGGCACCCTAACTGTGATTCCAAAGGGAAATGGAAGTTTGGTTAAGTGGTGTTGTGAATTTGAAAGGGCAAATGATGAAATTCCTGAGCCACAAATCATTAAAGAATTTGCTGTCAAGAATTTCAAGAATCTTGATGCTTATCTCATTGGGGCATAAAAAGACCTTATGACATATATGCTATGTGATAGAAATTAATAATCTTCACATAGTATATAGTTTTTAATGAATAAAATTACGTGCAGGTATGTGAGTAGCTACTTTACTTTTCTAGTCATGTAAGTGTAATAAAAACTTGAATAAATAAAACTATAATGGGGTTAAGACCTTATTACTAT</genome_strand>
        <mrna_strand>TCAATTTAAAAAAAATGTCATCCAATTTAGGAAAAATTGATGTTGAAGTTGAGGTGAAAAGTCCAGTTGACAAATTTTGGAATGGCATTAGGGACTCAATAAATTTGTTCCCCAAGGCTTCACCTAATGAATACAAGAGCATTGAAGTTGTTGAAGGTGATGGCAAGTCTGTTGGTTCTGTTCTATTGATCAAATATACTGAAGGTAATGTTCATGCATTGTTTCCTCATGTTTTAATTAATTTACGTGTCGTAACAGATAACTTATTTATTTTACAGATTTCAAATTCTCATTTTTTATGGATGGTTTGTCGGTTACTTGATCACTATACTACAAAAAAAATGGTCATTAGCAATAAAAACTAATCCAAAAAAACGTATTTTCTAATTTAATATCAAAAGACTTAAATTTTCTATATCTAAATTCACTATTAAATATTAGAAGTAACGAATCTCAAAATTCTGACTATGCCACATAGATTATAAAAGTTTAGAAGTACAAATCTCAAAATTCTTTGAATTCAGACTGTGCCACGTAATCTGAATTCACATAGTGACATGTTAAGTATATATAGTGTGACAAACCTGGATTGTAGTGCACTGGTGGAAGTGTTTCACTGTTAACCAGAGGTCTCATGTTCGAGCCCTGTGGATGAAGAAAATCTTGTTGGGAGTGTCACACCCGAACGGACTCTGCAGTGAGCGATCCAGAATTAGTCGGAGCTCCAATTCGGCCTCCGAACATCGATTGGAAAACCAAAAAAAAGTATATATACTCTGTTCTTTTGTTCTATTTTTCATTTTATTTTATAATTTCATTGTTTTTTTTTCATACAGGGTTTCCATTGGTGACATTCTCAAAAGAGAAAATAGAGTCAATTGATGAGGCAAATAAAACATTGGTTTATTCAGTTATTGATGGTGAAACCTTGAAATACTACAAGAGTTTCAAAGGCACCCTAACTGTGATTCCAAAGGGAAATGGAAGTTTGGTTAAGTGGTGTTGTGAATTTGAAAGGGCAAATGATGAAATTCCTGAGCCACAAATCATTAAAGAATTTGCTGTCAAGAATTTCAAGAATCTTGATGCTTATCTCATTGGGGCATAAAAAGACCTTATGACATATATGCTATGTGATAGAAATTAATAATCTTCACATAGTATATAGTTTTTAATGAATAAAATTACGTGCAGGTATGTGAGTAGCTACTTTACTTTTCTAGTCATGTAAGTGTAATAAAAACTTGAATAAATAAAACTATAATGGGGTTAAGACCTTATTACTAT</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U340173" ref_strand="-" ref_description="SGN-U340173        Tomato 200607 #1 [1 ESTs aligned] arabidopsis/peptide: | Symbol: None | nodulin MtN21 family protein, contains similarity to MtN21 (Medicago truncatula) GI:2598575; contains Pfam profile PF00892: Integral membrane protein | chr1:26460507-26463113 REVERSE | Aliases: F20P5.1, F20P5_1(evalue: 1e-34, score=143) genbank/nr: gi|42563104|ref|NP_177183.2| nodulin MtN21 family protein [Arabidopsis thaliana] (evalue: 9e-33, score=143)">
      <seq>gaactatacaatcagcaatatttgctttggttatggaaaaagatctaaatgcttggaaacttgagcttaacatggagcttcttgttatagttttaacggcaatttttgggagtttaatacgtagcaatgttcaaatgtggtgcatgcgtttgaaaggatcttcttttcctctatttttcaagccagtgggaattccaacagctagtgcttgtggatgtttactttttgctgatacttttcactatggaagtatgttgagtgcaattatatgtggaatgggttatttcactacactatggggacaactcaaagatgatgaaacaagtaaaaacattaagggtaggatattaccaacaactagtgatgagaaagttccacttttggaagaaagaggagaagacggagacgaagaagtcgaaggagattcaaaagtctaataaaagatggaaatttaataagatgatgaagataaatgttaagtgtttgctaggaattttaatatttgttgtatatatgtgttggagggaagtatttttttcaaaccttccaatgcaagttgaacaatgaaattgttgttcaacattatattgattgtttctctaggtagctatagaggttacgtacgctcttgttgatatgtgtgattgagaaatttggtgtatgttgattaatttcatcccatttgtaaatagtgtgcattgattttgatgagatatcgataatacgagtttgtgatggtaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="-" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="71840" stop="70201"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="71540" g_stop="71443" g_length="98"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="98" r_length="98" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="71442" i_stop="71320" i_length="123">
            <donor d_prob="0.952" d_score="1.00"/>
            <acceptor a_prob="0.913" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="71319" g_stop="71168" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="99" r_stop="250" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="71167" i_stop="71000" i_length="168">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.649" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="70999" g_stop="70495" g_length="505"/>
          <reference_exon_boundary r_type="cDNA" r_start="251" r_stop="755" r_length="505" r_score="0.980"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="-" ref_id="SGN-U340173" ref_strand="-">
        <total_alignment_score>0.987</total_alignment_score>
        <cumulative_length_of_scored_exons>755</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U340173" rDNA_strand="-"/>
        <gDNA_exon_coordinates>
          <exon e_start="71540" e_stop="71443"/>
          <exon e_start="71319" e_stop="71168"/>
          <exon e_start="70999" e_stop="70495"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GAACTATACAATCAGCAATATTTGCTTTGGTTATGGAAAAAGATCTAAATGCTTGGAAACTTGAGCTTAACATGGAGCTTCTTGTTATAGTTTTAACGGTAAATTTAATAAAGTGCACAAATTTATAATTTTCTATAGTCAATTCATCAATTATAACTATGGTCAAACTATATTAAGTTATTAACATGCAATTTTTATTTTTTTTTGTTCTTAAAAAATAGGCAATTTTTGGGAGTTTAATACGTAGCAATGTTCAAATGTGGTGCATGCGTTTGAAAGGATCTTCTTTTCCTCTATTTTTCAAGCCAGTGGGAATTCCAACAGCTAGTGCTTGTGGATGTTTACTTTTTGCTGATACTTTTCACTATGGAAGGCAAGTATATAAATTTTATCGATTTTTTTCCGTTAAATTATATACACTGACAATATATAAGTAAGAATAAATAGTCTTTACAGTATCAGTATACATGTTATATCTTGAGTTATTATTTTTTAAGTGATCTGATTGCGTAACATAATTGTATTGATGAATATTTTGTAGTATGTTGAGTGCAATTATATGTGGAATGGGTTATTTCACTACACTATGGGGACAACTCAAAGATGATGAAACAAGTAAAAACATTAAGGGTAGGATATTACCAACAACTAGTGATGAGAAAGTTCCACTTTTGGAAGAAAGAGGAGAAGACGGAGACGAAGAAGTCGAAGGAGATTCAAAAGTCTAATAAAAGATGGAAATTTAATAAGATGATGAAGATAAATGTTAAGTGTTTGCTAGGAATTTTAATATTTGTTGTATATATGTGTTGGAGGGAAGTATTTTTTTCAAACCTTCCAATGCAAGTTGAACAATGAAATTGTTGTTCAACATTATATTGATTGTTTCTCTAGGTAGCTATAGAGGTTACGTACGCTCTTGTTGATATGTGTGATTGAGAAATTTGGTGTATGTTGATTAATTTCATCCCATTTGTAAATAGTGTGCATTGATTTTGATGAGATATCGATAATACGAGTTTGTGATGGTATATATAAGATTGCGT</genome_strand>
        <mrna_strand>GAACTATACAATCAGCAATATTTGCTTTGGTTATGGAAAAAGATCTAAATGCTTGGAAACTTGAGCTTAACATGGAGCTTCTTGTTATAGTTTTAACG...........................................................................................................................GCAATTTTTGGGAGTTTAATACGTAGCAATGTTCAAATGTGGTGCATGCGTTTGAAAGGATCTTCTTTTCCTCTATTTTTCAAGCCAGTGGGAATTCCAACAGCTAGTGCTTGTGGATGTTTACTTTTTGCTGATACTTTTCACTATGGAAG........................................................................................................................................................................TATGTTGAGTGCAATTATATGTGGAATGGGTTATTTCACTACACTATGGGGACAACTCAAAGATGATGAAACAAGTAAAAACATTAAGGGTAGGATATTACCAACAACTAGTGATGAGAAAGTTCCACTTTTGGAAGAAAGAGGAGAAGACGGAGACGAAGAAGTCGAAGGAGATTCAAAAGTCTAATAAAAGATGGAAATTTAATAAGATGATGAAGATAAATGTTAAGTGTTTGCTAGGAATTTTAATATTTGTTGTATATATGTGTTGGAGGGAAGTATTTTTTTCAAACCTTCCAATGCAAGTTGAACAATGAAATTGTTGTTCAACATTATATTGATTGTTTCTCTAGGTAGCTATAGAGGTTACGTACGCTCTTGTTGATATGTGTGATTGAGAAATTTGGTGTATGTTGATTAATTTCATCCCATTTGTAAATAGTGTGCATTGATTTTGATGAGATATCGATAATACGAGTTTGTGATGGTAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
  <spliced_alignment xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
    <reference ref_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/gth_cdna_fileCXGN::BACSubmission::Analysis::GenomeThreader_SGN_U_tomato" ref_id="SGN-U326441" ref_strand="+" ref_description="SGN-U326441        Tomato 200607 #1 [4 ESTs aligned] arabidopsis/peptide: | Symbol: None | nodulin MtN21 family protein, similar to MtN21 (Medicago truncatula) GI:2598575; contains Pfam profile PF00892: Integral membrane protein | chr3:10444054-10446622 FORWARD | Aliases: MMG15.22(evalue: 3e-35, score=145) genbank/nr: conserved(evalue: 3e-42, score=174)">
      <seq>gcatttgttttgacattttataagggccctccaatcattaaccaacacttaacttctactttctcatctcaacaaaattggatccttggaggagttatacttgcttgtgagtctatgtccacttcactatggtacattattcaggcttcaattcttaagatataccaagaagagatggtgatagtgtgtttgtattgcttctttgtgaccatcatatctacattaatatccctagtggtggagagaaatacaaatgcttggatcatatatctagacattcgtctcattgctattctctactcgggtataattggtatagcatttaggagttgtatgacaacatggtgcctcaagaagacagatcctctctttgtttcaatgtttaagccctttgccattgtttttgctatcctcattggtaccttttgctttagagatgctttctacttaggaagtttggtgggatcagtgaccacagtgattgggttttatgctgtgatgtggggaaaaactcaagaaaaatactatgaggggaacaacttagaaacacttgctgaaaataatgtccctctgctgcaaaatgaggcataaatacggtgtttgagtcagctcgtgtgcgcctcaattaattttatgtgatatttattatctttcattaaacaacacaaatactgaatcaattcatttcgaggaaagaaataattgtatgttagttgtaaagatagtgttttaaatttatactcatgtattatatcgataaaaataaatatataaaaatcatttaaccaagttaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa</seq>
    </reference>
    <gDNA_segment>
      <template temp_file="/tmp/bac-submission-temp-C05HBa0042B19-uY1ou/GenomeThreader_SGN_U_tomato/un_xed_seqs" temp_id="C05HBa0042B19.1" temp_strand="-" temp_description="C05HBa0042B19.1  AC188778.1 htgs_phase:3 submitted_to_sgn_as:C05HBa0042B19, sequenced_by:iitg upload_account_name:india complete sequence">
        <position start="90987" stop="13194"/>
      </template>
    </gDNA_segment>
    <predicted_gene_structure xmlns="http://www.genomethreader.org/GTH_output/alignment_module/spliced_alignment/">
      <exon-intron_info>
        <exon e_serial="1">
          <gDNA_exon_boundary g_start="90687" g_stop="90544" g_length="144"/>
          <reference_exon_boundary r_type="cDNA" r_start="1" r_stop="144" r_length="144" r_score="1.000"/>
        </exon>
        <intron i_serial="1">
          <gDNA_intron_boundary i_start="90543" i_stop="90353" i_length="191">
            <donor d_prob="0.499" d_score="1.00"/>
            <acceptor a_prob="0.991" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="2">
          <gDNA_exon_boundary g_start="90352" g_stop="90194" g_length="159"/>
          <reference_exon_boundary r_type="cDNA" r_start="145" r_stop="303" r_length="159" r_score="1.000"/>
        </exon>
        <intron i_serial="2">
          <gDNA_intron_boundary i_start="90193" i_stop="89908" i_length="286">
            <donor d_prob="0.997" d_score="1.00"/>
            <acceptor a_prob="0.828" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="3">
          <gDNA_exon_boundary g_start="89907" g_stop="89756" g_length="152"/>
          <reference_exon_boundary r_type="cDNA" r_start="304" r_stop="455" r_length="152" r_score="1.000"/>
        </exon>
        <intron i_serial="3">
          <gDNA_intron_boundary i_start="89755" i_stop="89211" i_length="545">
            <donor d_prob="0.992" d_score="1.00"/>
            <acceptor a_prob="0.990" a_score="1.00"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="4">
          <gDNA_exon_boundary g_start="89210" g_stop="88877" g_length="334"/>
          <reference_exon_boundary r_type="cDNA" r_start="456" r_stop="789" r_length="334" r_score="1.000"/>
        </exon>
        <intron i_serial="4">
          <gDNA_intron_boundary i_start="88876" i_stop="88515" i_length="362">
            <donor d_prob="0.000" d_score="1.00"/>
            <acceptor a_prob="0.000" a_score="0.66"/>
          </gDNA_intron_boundary>
        </intron>
        <exon e_serial="5">
          <gDNA_exon_boundary g_start="88514" g_stop="88464" g_length="51"/>
          <reference_exon_boundary r_type="cDNA" r_start="790" r_stop="840" r_length="51" r_score="0.667"/>
        </exon>
      </exon-intron_info>
      <MATCH_line gen_id="C05HBa0042B19.1" gen_strand="-" ref_id="SGN-U326441" ref_strand="+">
        <total_alignment_score>0.980</total_alignment_score>
        <cumulative_length_of_scored_exons>840</cumulative_length_of_scored_exons>
        <coverage percentage="1.000" high_type="C"/>
      </MATCH_line>
      <PGS_line>
        <gDNA gen_id="C05HBa0042B19.1" gen_strand="-"/>
        <rDNA rDNA_id="SGN-U326441" rDNA_strand="+"/>
        <gDNA_exon_coordinates>
          <exon e_start="90687" e_stop="90544"/>
          <exon e_start="90352" e_stop="90194"/>
          <exon e_start="89907" e_stop="89756"/>
          <exon e_start="89210" e_stop="88877"/>
          <exon e_start="88514" e_stop="88464"/>
        </gDNA_exon_coordinates>
      </PGS_line>
      <alignment>
        <genome_strand>GCATTTGTTTTGACATTTTATAAGGGCCCTCCAATCATTAACCAACACTTAACTTCTACTTTCTCATCTCAACAAAATTGGATCCTTGGAGGAGTTATACTTGCTTGTGAGTCTATGTCCACTTCACTATGGTACATTATTCAGGTCTGTCTGTTTGGTACGACGAAAATAATTTTTTACTTTTAAAAATGTATTTTTGTCAACGAAACACTAGGAAATGACTTTTGATGACTTTTAAAAATGCATATTTTATCAACGAAACATCAGAAAATGACTTTTGGCCGTGTGTGATTAATTAACTATGATATTTTTTTTTTTAATTTTTTGTTTTTTAGGCTTCAATTCTTAAGATATACCAAGAAGAGATGGTGATAGTGTGTTTGTATTGCTTCTTTGTGACCATCATATCTACATTAATATCCCTAGTGGTGGAGAGAAATACAAATGCTTGGATCATATATCTAGACATTCGTCTCATTGCTATTCTCTACTCGGTAATACTAACAACTAAACACACATTCATTTTCTTTTTGACTCGAATCTATAAAAAAGTTAAATTAGTTCACGAAAATATGACTAGTCTATGTTATTTTATGATTGGATGTGTTAATGACTCACTTATATTAAGTCAAATTCATCTAATAGATTGGGTTGATTTGAAGTACATGTATTGATTTATGAGAAAAATTGTCAAAATATTTTAAGTTGTTATTTGATATATGTTATTATAATTATACTTTATTTAAGACAATTAACTTACATTAGAATTTGTTCATTCAGGGTATAATTGGTATAGCATTTAGGAGTTGTATGACAACATGGTGCCTCAAGAAGACAGATCCTCTCTTTGTTTCAATGTTTAAGCCCTTTGCCATTGTTTTTGCTATCCTCATTGGTACCTTTTGCTTTAGAGATGCTTTCTACTTAGGAAGGTATGTATTATTAACTATTATAAATTTGAGATAAGTATTTAAAATACCTCTAAATTTGGTGTGAATTATTAGTTTTCATCTTTGAAATATTGTCTGTCTGAAAAACATTCCTTCACTTTACTAATTGAACTTAAATAAATAAACTTCTTATCTTGTCATATTGGTAAAACATGCCTCTAAATTCTTGACAAGTTTAAAGGTGTTTTCAACATTTCTCTCGGCGTTTTATTTGAAGTCTCACGTTCCTATAAGAGTTTGAGATCATTTCTCAAGGCAAATCGAGAGTGTTTTTATATTCAATTAGTCAAGTAGAGAGATTTTTTAAAGGCTGTTAATAGTTCGGTATGAACCACACCAAGTTCATTCAGGAGTGTTTTCAATACGTTAAACTTCACGGCATGTTTTAATATTAATATTCTAATCATTTTAAAAGTTTCTATATTCAATAAAAAATTATCGATATGTTACGTAAAATGAAATGAATCTAGGGGTAAAATAAACATTTAAGATATGATATGTGTACTAATATAGACATTTGTTTGCAGTTTGGTGGGATCAGTGACCACAGTGATTGGGTTTTATGCTGTGATGTGGGGAAAAACTCAAGAAAAATACTATGAGGGGAACAACTTAGAAACACTTGCTGAAAATAATGTCCCTCTGCTGCAAAATGAGGCATAAATACGGTGTTTGAGTCAGCTCGTGTGCGCCTCAATTAATTTTATGTGATATTTATTATCTTTCATTAAACAACACAAATACTGAATCAATTCATTTCGAGGAAAGAAATAATTGTATGTTAGTTGTAAAGATAGTGTTTTAAATTTATACTCATGTATTATATCGATAAAAATAAATATATAAAAATCATTTAACCAAGTTACTAATTTTCTCGGGAAAACGTGTAAAAAAACATGACAAACTAAAATGAAACAAAATAGTATATCATAACCTTGAGAAATAACTGAGCATAATATGACCTCTGGACATACTTCTAATAACACTACCTAACTATGTTTTGTAGATTGTAAAATATTATTTAACCAATTATTGTTTCAATAGGATGTCTATATAATTTAAAAACTCAATAATTTTTATATCCATATAACAAACCACATTTAAAAAAAAAAATACAATAGCTTTTTCTTAAATGAATATATTAGTGCAAGTGATAAACACCACCCACCCACTATGTTCATTCAGTATAAATTAAAATAAAGGAATACCACCCATGCTGGTACGTTAGAAATAAGTAAAATAAAGAAACTAATCATAATAAAATTTAAAATATA</genome_strand>
        <mrna_strand>GCATTTGTTTTGACATTTTATAAGGGCCCTCCAATCATTAACCAACACTTAACTTCTACTTTCTCATCTCAACAAAATTGGATCCTTGGAGGAGTTATACTTGCTTGTGAGTCTATGTCCACTTCACTATGGTACATTATTCAG...............................................................................................................................................................................................GCTTCAATTCTTAAGATATACCAAGAAGAGATGGTGATAGTGTGTTTGTATTGCTTCTTTGTGACCATCATATCTACATTAATATCCCTAGTGGTGGAGAGAAATACAAATGCTTGGATCATATATCTAGACATTCGTCTCATTGCTATTCTCTACTCG..............................................................................................................................................................................................................................................................................................GGTATAATTGGTATAGCATTTAGGAGTTGTATGACAACATGGTGCCTCAAGAAGACAGATCCTCTCTTTGTTTCAATGTTTAAGCCCTTTGCCATTGTTTTTGCTATCCTCATTGGTACCTTTTGCTTTAGAGATGCTTTCTACTTAGGAAG.................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................................TTTGGTGGGATCAGTGACCACAGTGATTGGGTTTTATGCTGTGATGTGGGGAAAAACTCAAGAAAAATACTATGAGGGGAACAACTTAGAAACACTTGCTGAAAATAATGTCCCTCTGCTGCAAAATGAGGCATAAATACGGTGTTTGAGTCAGCTCGTGTGCGCCTCAATTAATTTTATGTGATATTTATTATCTTTCATTAAACAACACAAATACTGAATCAATTCATTTCGAGGAAAGAAATAATTGTATGTTAGTTGTAAAGATAGTGTTTTAAATTTATACTCATGTATTATATCGATAAAAATAAATATATAAAAATCATTTAACCAA..........................................................................................................................................................................................................................................................................................................................................................................GTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA</mrna_strand>
      </alignment>
    </predicted_gene_structure>
  </spliced_alignment>
    <total_number_ESTs_reported>22</total_number_ESTs_reported>
    </alignment_module>
  <PGL_module xmlns="http://www.genomethreader.org/GTH_output/PGL_module/">
    <predicted_gene_location>
      <PGL_line PGL_serial="1" PGL_strand="+" PGL_start="2654" PGL_stop="3885"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="2654" e_stop="2726"/>
            <exon e_start="2813" e_stop="3030"/>
            <exon e_start="3133" e_stop="3683"/>
            <exon e_start="3764" e_stop="3885"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="0.973"/>
          <exon-intron don_prob="0.990" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.967" e_score="0.960"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.973">
            <gDNA_exon_boundary e_start="2654" e_stop="2726" e_length="73"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="2727" i_stop="2812" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="2813" e_stop="3030" e_length="218"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.990">
            <gDNA_intron_boundary i_start="3031" i_stop="3132" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="0.960">
            <gDNA_exon_boundary e_start="3133" e_stop="3683" e_length="551"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.967">
            <gDNA_intron_boundary i_start="3684" i_stop="3763" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="3764" e_stop="3885" e_length="122"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="2654" stop="2726"/>
              <exon start="2813" stop="3030"/>
              <exon start="3133" stop="3683"/>
              <exon start="3764" stop="3885"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="3187" stop="3657"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334412" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="1" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GAAAAAGAATTTTTATTGAATCACTCACAAAATTCAACAAAGGGAGGTTTAAAAACCATTCCTTTCATCATAG : TGAATGAATCATGTGAGAGATTGGCAAGTTTTGGTTTGCAACCAAATATGATAATCTACATAACAAAATTTTACAACATTAATGCTGCTCATGCTTCAGTTTTGATTAATTTATGGTCAGCAGTTTCAAATGTATTGTCTATTTTGGGAGCTTTTATTTCTGATTCTTACATTGGAAGGTTTAGGGCTGTGGCTATTGGAACCATCTCTAGCCTAATA : GGAATGCTTGTTCTTTGGCTCACAACAATTTTTCCACAACTCAGGCCGTTACCCTGCGGTCAGTATCAACATGATTGTAATGGAACAACAGCAGCACAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGTGCTGGTCTTGTTAGACCTTGTTCCATAGCATTGGGTGCCGACCAATTGGAGAACAAAGAAAATCCAGATAACGAGAGACTTATGGATAGCTATTTCAATTGGTTCTATGCCAGTATCGGAGTTGCAATTGTTTTTGCAGTTACTGTAATTGTTTATATCCAAGACCATTTTGGTTGGCAAGTTGGGTTTGGTGTTCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTTCTTGATTGGATCTCCTCATTATATCAAAGCAAAACCTAAAGGGAGTTTGTTCACTGGATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAACGTTCAATTGAATTATAATGACGACTCCTACTATAAAACACCTGAATCAAAGCTCCTCGAACCATCCACGGACTTCAG : GTGTTTGAATAGAGCTTGCATAATTGAAGATCCTAACATGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCATGGAGTCTCTGCTCTGTGGAACAAGTCAAAATAATGAAGTGTTTTCTTA</gDNA_template>
            <first_frame> E  K  E  F  L  L  N  H  S  Q  N  S  T  K  G  G  L  K  T  I  P  F  I  I   : V  N  E  S  C  E  R  L  A  S  F  G  L  Q  P  N  M  I  I  Y  I  T  K  F  Y  N  I  N  A  A  H  A  S  V  L  I  N  L  W  S  A  V  S  N  V  L  S  I  L  G  A  F  I  S  D  S  Y  I  G  R  F  R  A  V  A  I  G  T  I  S  S  L  I  :  G  M  L  V  L  W  L  T  T  I  F  P  Q  L  R  P  L  P  C  G  Q  Y  Q  H  D  C  N  G  T  T  A  A  Q  L  A  A  I  L  C  S  F  G  L  I  S  I  G  A  G  L  V  R  P  C  S  I  A  L  G  A  D  Q  L  E  N  K  E  N  P  D  N  E  R  L  M  D  S  Y  F  N  W  F  Y  A  S  I  G  V  A  I  V  F  A  V  T  V  I  V  Y  I  Q  D  H  F  G  W  Q  V  G  F  G  V  P  A  L  L  M  V  L  S  V  S  V  F  L  I  G  S  P  H  Y  I  K  A  K  P  K  G  S  L  F  T  G  L  F  Q  V  A  V  A  A  F  R  K  R  H  I  N  V  Q  L  N  Y  N  D  D  S  Y  Y  K  T  P  E  S  K  L  L  E  P  S  T  D  F  R :   C  L  N  R  A  C  I  I  E  D  P  N  M  E  L  K  P  D  G  K  A  S  D  P  W  S  L  C  S  V  E  Q  V  K  I  M  K  C  F  L  </first_frame>
            <second_frame>  K  K  N  F  Y  *  I  T  H  K  I  Q  Q  R  E  V  *  K  P  F  L  S  S  *  :  *  M  N  H  V  R  D  W  Q  V  L  V  C  N  Q  I  *  *  S  T  *  Q  N  F  T  T  L  M  L  L  M  L  Q  F  *  L  I  Y  G  Q  Q  F  Q  M  Y  C  L  F  W  E  L  L  F  L  I  L  T  L  E  G  L  G  L  W  L  L  E  P  S  L  A  *  * :   E  C  L  F  F  G  S  Q  Q  F  F  H  N  S  G  R  Y  P  A  V  S  I  N  M  I  V  M  E  Q  Q  Q  H  N  L  L  Q  F  C  V  L  L  G  L  F  P  L  V  L  V  L  L  D  L  V  P  *  H  W  V  P  T  N  W  R  T  K  K  I  Q  I  T  R  D  L  W  I  A  I  S  I  G  S  M  P  V  S  E  L  Q  L  F  L  Q  L  L  *  L  F  I  S  K  T  I  L  V  G  K  L  G  L  V  F  L  L  C  S  W  F  Y  L  F  P  F  S  *  L  D  L  L  I  I  S  K  Q  N  L  K  G  V  C  S  L  D  C  F  K  *  Q  S  Q  P  S  E  K  D  I  S  T  F  N  *  I  I  M  T  T  P  T  I  K  H  L  N  Q  S  S  S  N  H  P  R  T  S   : G  V  *  I  E  L  A  *  L  K  I  L  T  W  S  *  N  L  M  E  K  L  Q  I  H  G  V  S  A  L  W  N  K  S  K  *  *  S  V  F  L </second_frame>
            <third_frame>   K  R  I  F  I  E  S  L  T  K  F  N  K  G  R  F  K  N  H  S  F  H  H  S :   E  *  I  M  *  E  I  G  K  F  W  F  A  T  K  Y  D  N  L  H  N  K  I  L  Q  H  *  C  C  S  C  F  S  F  D  *  F  M  V  S  S  F  K  C  I  V  Y  F  G  S  F  Y  F  *  F  L  H  W  K  V  *  G  C  G  Y  W  N  H  L  *  P  N   : R  N  A  C  S  L  A  H  N  N  F  S  T  T  Q  A  V  T  L  R  S  V  S  T  *  L  *  W  N  N  S  S  T  T  C  C  N  F  V  F  F  W  A  Y  F  H  W  C  W  S  C  *  T  L  F  H  S  I  G  C  R  P  I  G  E  Q  R  K  S  R  *  R  E  T  Y  G  *  L  F  Q  L  V  L  C  Q  Y  R  S  C  N  C  F  C  S  Y  C  N  C  L  Y  P  R  P  F  W  L  A  S  W  V  W  C  S  C  F  A  H  G  F  I  C  F  R  F  L  D  W  I  S  S  L  Y  Q  S  K  T  *  R  E  F  V  H  W  I  V  S  S  S  S  R  S  L  Q  K  K  T  Y  Q  R  S  I  E  L  *  *  R  L  L  L  *  N  T  *  I  K  A  P  R  T  I  H  G  L  Q  :  V  F  E  *  S  L  H  N  *  R  S  *  H  G  V  E  T  *  W  K  S  F  R  S  M  E  S  L  L  C  G  T  S  Q  N  N  E  V  F  S   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="1" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="2654" stop="2726"/>
                    <exon start="2813" stop="3030"/>
                    <exon start="3133" stop="3683"/>
                    <exon start="3764" stop="3884"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>963</number_coding_nucleotides>
                  <number_encoded_amino_acids>321</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKEFLLNHSQNSTKGGLKTIPFIIVNESCERLASFGLQPNMIIYITKFYNINAAHASVLINLWSAVSNVLSILGAFISDSYIGRFRAVAIGTISSLIGMLVLWLTTIFPQLRPLPCGQYQHDCNGTTAAQLAAILCSFGLISIGAGLVRPCSIALGADQLENKENPDNERLMDSYFNWFYASIGVAIVFAVTVIVYIQDHFGWQVGFGVPALLMVLSVSVFLIGSPHYIKAKPKGSLFTGLFQVAVAAFRKRHINVQLNYNDDSYYKTPESKLLEPSTDFRCLNRACIIEDPNMELKPDGKASDPWSLCSVEQVKIMKCFL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="2" PGL_strand="-" PGL_start="7954" PGL_stop="6696"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="7954" e_stop="7854"/>
            <exon e_start="7768" e_stop="7551"/>
            <exon e_start="7448" e_stop="6898"/>
            <exon e_start="6817" e_stop="6696"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.994" e_score="1.000"/>
          <exon-intron don_prob="0.990" acc_prob="0.993" e_score="1.000"/>
          <exon-intron don_prob="0.996" acc_prob="0.967" e_score="1.000"/>
          <exon-only e_score="0.992"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="7954" e_stop="7854" e_length="101"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.994">
            <gDNA_intron_boundary i_start="7853" i_stop="7769" i_length="85"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="7768" e_stop="7551" e_length="218"/>
          </exon>
          <intron i_serial="2" don_prob="0.990" acc_prob="0.993">
            <gDNA_intron_boundary i_start="7550" i_stop="7449" i_length="102"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="7448" e_stop="6898" e_length="551"/>
          </exon>
          <intron i_serial="3" don_prob="0.996" acc_prob="0.967">
            <gDNA_intron_boundary i_start="6897" i_stop="6818" i_length="80"/>
          </intron>
          <exon e_serial="4" e_score="0.992">
            <gDNA_exon_boundary e_start="6817" e_stop="6696" e_length="122"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7954" stop="7854"/>
              <exon start="7768" stop="7551"/>
              <exon start="7448" stop="6898"/>
              <exon start="6817" stop="6696"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313502" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="7394" stop="6924"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U334412" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="2" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAAAAAAATGGGCAAAAACACTGAACAAGAAGAAGAGTTTTTATTGAATCACTCACAAAATTCAACAAAGGGAGGTTTAAAAACCATTCCTTTCATCATAG : TGAATGAATCATGTGAGAGATTGGCAAGTTTTGGTTTGCAACCAAATATGATAATCTACATAACAAAATTTTACAACATTAATGCTGCTCATGCTTCAGTTTTGATTAATTTATGGTCAGCAGTTTCAAATGTATTGTCTATTTTGGGAGCTTTTATTTCTGATTCTTACATTGGAAGGTTTAGGGCTGTGGCTATTGGAACCATCTCTAGCCTAATA : GGAATGCTTGTTCTTTGGCTCACAACAATATTTCCACAACTCAGGCCGTTACCCTGCGGTCAGTATCAACATGATTGTAATGGAACAACAGCAGCACAACTTGCTGCAATTTTGTGTTCTTTTGGGCTTATTTCCATTGGTGCTGGTTTTGTTAGACCTTGTTCCATTGCATTGGGTGCAGACCAATTGGGTAACAAAGAAAATCTAGATAATGAGAGACTTCTGGATAGCTATTTCAGTTGGTTCTATGCAAGTGTCGGAGTTTCAATTGTTCTTGCAGTTACTGTAATTGTTTATATCCAAGATCATTTTGGTTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTTCTTGGTTGGATCTCCTCATTATATCAAAGCAAAGCCTGAAGGTAGTTTGTTCACTGGATTGTTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATCAACGTTCAATTGAATTATAATGACGACTCCTACTATAAAGCACCTGAATCAAAGCTCCTCGAACCATCCACTGACTTCAG : GTGTTTGAATAGAGCTTGCATAATTGAAGATCCTAACATGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCATGGAGTCTCTGCTCTGTGGAACAAGTCAAAATAATGAAGTGTTTTCTTA</gDNA_template>
            <first_frame> E  K  N  G  Q  K  H  *  T  R  R  R  V  F  I  E  S  L  T  K  F  N  K  G  R  F  K  N  H  S  F  H  H  S :   E  *  I  M  *  E  I  G  K  F  W  F  A  T  K  Y  D  N  L  H  N  K  I  L  Q  H  *  C  C  S  C  F  S  F  D  *  F  M  V  S  S  F  K  C  I  V  Y  F  G  S  F  Y  F  *  F  L  H  W  K  V  *  G  C  G  Y  W  N  H  L  *  P  N   : R  N  A  C  S  L  A  H  N  N  I  S  T  T  Q  A  V  T  L  R  S  V  S  T  *  L  *  W  N  N  S  S  T  T  C  C  N  F  V  F  F  W  A  Y  F  H  W  C  W  F  C  *  T  L  F  H  C  I  G  C  R  P  I  G  *  Q  R  K  S  R  *  *  E  T  S  G  *  L  F  Q  L  V  L  C  K  C  R  S  F  N  C  S  C  S  Y  C  N  C  L  Y  P  R  S  F  W  L  A  S  W  V  W  C  P  C  F  A  H  G  F  I  C  F  R  F  L  G  W  I  S  S  L  Y  Q  S  K  A  *  R  *  F  V  H  W  I  V  S  S  S  S  R  S  L  Q  K  K  T  Y  Q  R  S  I  E  L  *  *  R  L  L  L  *  S  T  *  I  K  A  P  R  T  I  H  *  L  Q  :  V  F  E  *  S  L  H  N  *  R  S  *  H  G  V  E  T  *  W  K  S  F  R  S  M  E  S  L  L  C  G  T  S  Q  N  N  E  V  F  S   </first_frame>
            <second_frame>  K  K  M  G  K  N  T  E  Q  E  E  E  F  L  L  N  H  S  Q  N  S  T  K  G  G  L  K  T  I  P  F  I  I   : V  N  E  S  C  E  R  L  A  S  F  G  L  Q  P  N  M  I  I  Y  I  T  K  F  Y  N  I  N  A  A  H  A  S  V  L  I  N  L  W  S  A  V  S  N  V  L  S  I  L  G  A  F  I  S  D  S  Y  I  G  R  F  R  A  V  A  I  G  T  I  S  S  L  I  :  G  M  L  V  L  W  L  T  T  I  F  P  Q  L  R  P  L  P  C  G  Q  Y  Q  H  D  C  N  G  T  T  A  A  Q  L  A  A  I  L  C  S  F  G  L  I  S  I  G  A  G  F  V  R  P  C  S  I  A  L  G  A  D  Q  L  G  N  K  E  N  L  D  N  E  R  L  L  D  S  Y  F  S  W  F  Y  A  S  V  G  V  S  I  V  L  A  V  T  V  I  V  Y  I  Q  D  H  F  G  W  Q  V  G  F  G  V  P  A  L  L  M  V  L  S  V  S  V  F  L  V  G  S  P  H  Y  I  K  A  K  P  E  G  S  L  F  T  G  L  F  Q  V  A  V  A  A  F  R  K  R  H  I  N  V  Q  L  N  Y  N  D  D  S  Y  Y  K  A  P  E  S  K  L  L  E  P  S  T  D  F  R :   C  L  N  R  A  C  I  I  E  D  P  N  M  E  L  K  P  D  G  K  A  S  D  P  W  S  L  C  S  V  E  Q  V  K  I  M  K  C  F  L  </second_frame>
            <third_frame>   K  K  W  A  K  T  L  N  K  K  K  S  F  Y  *  I  T  H  K  I  Q  Q  R  E  V  *  K  P  F  L  S  S  *  :  *  M  N  H  V  R  D  W  Q  V  L  V  C  N  Q  I  *  *  S  T  *  Q  N  F  T  T  L  M  L  L  M  L  Q  F  *  L  I  Y  G  Q  Q  F  Q  M  Y  C  L  F  W  E  L  L  F  L  I  L  T  L  E  G  L  G  L  W  L  L  E  P  S  L  A  *  * :   E  C  L  F  F  G  S  Q  Q  Y  F  H  N  S  G  R  Y  P  A  V  S  I  N  M  I  V  M  E  Q  Q  Q  H  N  L  L  Q  F  C  V  L  L  G  L  F  P  L  V  L  V  L  L  D  L  V  P  L  H  W  V  Q  T  N  W  V  T  K  K  I  *  I  M  R  D  F  W  I  A  I  S  V  G  S  M  Q  V  S  E  F  Q  L  F  L  Q  L  L  *  L  F  I  S  K  I  I  L  V  G  K  L  G  L  V  S  L  L  C  S  W  F  Y  L  F  P  F  S  W  L  D  L  L  I  I  S  K  Q  S  L  K  V  V  C  S  L  D  C  F  K  *  Q  S  Q  P  S  E  K  D  I  S  T  F  N  *  I  I  M  T  T  P  T  I  K  H  L  N  Q  S  S  S  N  H  P  L  T  S   : G  V  *  I  E  L  A  *  L  K  I  L  T  W  S  *  N  L  M  E  K  L  Q  I  H  G  V  S  A  L  W  N  K  S  K  *  *  S  V  F  L </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="-"/>
                <serials PGL_serial="2" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="7953" stop="7854"/>
                    <exon start="7768" stop="7551"/>
                    <exon start="7448" stop="6898"/>
                    <exon start="6817" stop="6697"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>990</number_coding_nucleotides>
                  <number_encoded_amino_acids>330</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KKMGKNTEQEEEFLLNHSQNSTKGGLKTIPFIIVNESCERLASFGLQPNMIIYITKFYNINAAHASVLINLWSAVSNVLSILGAFISDSYIGRFRAVAIGTISSLIGMLVLWLTTIFPQLRPLPCGQYQHDCNGTTAAQLAAILCSFGLISIGAGFVRPCSIALGADQLGNKENLDNERLLDSYFSWFYASVGVSIVLAVTVIVYIQDHFGWQVGFGVPALLMVLSVSVFLVGSPHYIKAKPEGSLFTGLFQVAVAAFRKRHINVQLNYNDDSYYKAPESKLLEPSTDFRCLNRACIIEDPNMELKPDGKASDPWSLCSVEQVKIMKCFL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="3" PGL_strand="+" PGL_start="13254" PGL_stop="15892"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="13254" e_stop="13430"/>
            <exon e_start="13517" e_stop="13734"/>
            <exon e_start="13871" e_stop="14421"/>
            <exon e_start="14774" e_stop="15892"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.998" e_score="1.000"/>
          <exon-intron don_prob="0.936" acc_prob="0.958" e_score="1.000"/>
          <exon-intron don_prob="1.000" acc_prob="0.984" e_score="1.000"/>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="13254" e_stop="13430" e_length="177"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.998">
            <gDNA_intron_boundary i_start="13431" i_stop="13516" i_length="86"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="13517" e_stop="13734" e_length="218"/>
          </exon>
          <intron i_serial="2" don_prob="0.936" acc_prob="0.958">
            <gDNA_intron_boundary i_start="13735" i_stop="13870" i_length="136"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="13871" e_stop="14421" e_length="551"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.984">
            <gDNA_intron_boundary i_start="14422" i_stop="14773" i_length="352"/>
          </intron>
          <exon e_serial="4" e_score="0.996">
            <gDNA_exon_boundary e_start="14774" e_stop="15892" e_length="1119"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="13254" stop="13430"/>
              <exon start="13517" stop="13734"/>
              <exon start="13871" stop="14421"/>
              <exon start="14774" stop="15892"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U313503" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="3" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TTTTTAGCATGCATATACATTTATTTATCTCTCAAAAACTTCTCTCTTTCTTCCACTCTCTTTGGAGTTAACAAGGAAGAAAGAAAATGGGGAATAAACCAGAAGAAGAAGAGTTTTTACTAAATCACTCACAAAATTCAACAAAGGGTGGTGTAAAAACCATTCCTTTCATTATAG : TGAATGAATCATGTGAGAGAGTAGCAAGTTTTGGTTTGCAACCAAACATGATACTCTATATAACAAAATTTTACAACATGGATGCTGCTCGTGCTTCAGTTTTGTTGAATTTATGGTCAGCACTTTCAAATGGATTGGCTATTTTTGGGGCTTTTATTTCTGATTCTTACATTGGAAGATTTAGGGCTATTGCTATTGGAACTATCTCCAGTCTAATT : GGAATGATACTTCTTTGGCTCACTACAATATTTCCACAACTCAGGCCGTTACCCTGTGGTCAGTATCAACTTGATTGTAACGCAGCAACATCAACGCAACTTGCTGTAATTTTGTGTTCTTTTGGGCTTATTGCCATTGGTGCTGGTTTTGTTAGACCTTGTTCAGTAGCATTTGGTGCTGATCAATTAGAGAACAAACGAAATCCAGATAATGAGAGAGTTATGGATACCTATTTCAACTGGTTTTATGCTAGTGTAGGAATTTCAATCTCTGTTGCAATTACTGTAATTGTTTATATCCAAGTGCAGTTTGGTTGGCAAGTTGGGTTTGGTGTCCCTGCTTTGCTCATGGTTTTATCTGTTTCCGTTTATTTAATTGGATCTCCTCTTTATATAAAACCAAAATCTGAAGGGAGTTTGTTCACTGGATTATTTCAAGTAGCAGTCGCAGCCTTCAGAAAAAGACATATTAATGTTCAGTTGAATTATAATGACGACTGCTACTATAAAGCACCTGAATCAAAGCTCCTCGAACCATCCACTGACTTCAG : GTGTTTGAATAGAGCTTGCATAATTGAAGATCCTCACGTGGAGTTGAAACCTGATGGAAAAGCTTCAGATCCGTGGAGTCTCTGCTTTGTGGAACAAGTCGAAATAATGAAGTGTTTTCTTAGAGTTCTTCCCATGTGGTCCACCTGTATTATGCTTCTTGTGTCGTTCGGTCAGCCACTTTCGATATATCAACTATTGACCGTGGATAGACACATTACTCCTCAGTTTGAAATCCCAGCAGGATCATTCGGCATGATTACCGTTTTTTCTTTGACAATCTGGATGGCTTTTTACGATCGTGCAGTGGTTCCTTTACTGTCTAGGTATACTGGACTGTCGACTGGGATAAGTCCATTTTCCAGAATGGGGATTGGCTTATTTCTGGGCATTGTGGGTACGACACTTTCAGCTATAACAGAAACCATACGACGCAATAAGGCAATCAACGCAGGGTTTGAGGATGATCCGAACGCTGTGTTAAACATGTCCTCTATGTGGTTTGTACCACAGTTGGCACTATACGGGGTGGCTGAGGCTTTGAATGTGGTTGGACAGATCGAGTTTATATATAGTCTATTTCCAAAAACCATGTCCAGCTTTGCAGCAGCTCTTTACACGTTTGGCCTAGCGCTTGCCGGCTTAATTAACAGTCTCTTGGTGAGCGTGGTGGATAGTACTACCTCAGCTGGAGGCAACACAAGTTGGCTCGCCACAAACATAAACAGAGGTCATCTAGATTACTACTGCTGGCTAATAACTTTCTTATGTGTGATTAACTTCCTCTATTTTTTAGCCGTTTGTCGATTCACTGATCAGCATCACCATGATGGTAGGAGTAGCTTATTTCCTGATGCAGAAGAGGAACACTCTGAGAATAGGCGTTTTCATGGTGCGTAATGTGTACGCTATGTTTGTGTTTGAACATTTGCATGTATTGTAACTTCTCTTAAATCCTTGACCTAGAATAAATTGAGGGCTTCTGTCTTTAAGACAGAGAAGACGAGTGCCAAAAAACCTCACACATATGTCAATAAAATTTTTAGTTGATGAGTATTATTTTTCTTGATAGCTGTGTTAAGTTAGTTTAACAAGTAAAAATGAATGGATAGATTATGTAA</gDNA_template>
            <first_frame> F  L  A  C  I  Y  I  Y  L  S  L  K  N  F  S  L  S  S  T  L  F  G  V  N  K  E  E  R  K  W  G  I  N  Q  K  K  K  S  F  Y  *  I  T  H  K  I  Q  Q  R  V  V  *  K  P  F  L  S  L  *  :  *  M  N  H  V  R  E  *  Q  V  L  V  C  N  Q  T  *  Y  S  I  *  Q  N  F  T  T  W  M  L  L  V  L  Q  F  C  *  I  Y  G  Q  H  F  Q  M  D  W  L  F  L  G  L  L  F  L  I  L  T  L  E  D  L  G  L  L  L  L  E  L  S  P  V  *  L :   E  *  Y  F  F  G  S  L  Q  Y  F  H  N  S  G  R  Y  P  V  V  S  I  N  L  I  V  T  Q  Q  H  Q  R  N  L  L  *  F  C  V  L  L  G  L  L  P  L  V  L  V  L  L  D  L  V  Q  *  H  L  V  L  I  N  *  R  T  N  E  I  Q  I  M  R  E  L  W  I  P  I  S  T  G  F  M  L  V  *  E  F  Q  S  L  L  Q  L  L  *  L  F  I  S  K  C  S  L  V  G  K  L  G  L  V  S  L  L  C  S  W  F  Y  L  F  P  F  I  *  L  D  L  L  F  I  *  N  Q  N  L  K  G  V  C  S  L  D  Y  F  K  *  Q  S  Q  P  S  E  K  D  I  L  M  F  S  *  I  I  M  T  T  A  T  I  K  H  L  N  Q  S  S  S  N  H  P  L  T  S   : G  V  *  I  E  L  A  *  L  K  I  L  T  W  S  *  N  L  M  E  K  L  Q  I  R  G  V  S  A  L  W  N  K  S  K  *  *  S  V  F  L  E  F  F  P  C  G  P  P  V  L  C  F  L  C  R  S  V  S  H  F  R  Y  I  N  Y  *  P  W  I  D  T  L  L  L  S  L  K  S  Q  Q  D  H  S  A  *  L  P  F  F  L  *  Q  S  G  W  L  F  T  I  V  Q  W  F  L  Y  C  L  G  I  L  D  C  R  L  G  *  V  H  F  P  E  W  G  L  A  Y  F  W  A  L  W  V  R  H  F  Q  L  *  Q  K  P  Y  D  A  I  R  Q  S  T  Q  G  L  R  M  I  R  T  L  C  *  T  C  P  L  C  G  L  Y  H  S  W  H  Y  T  G  W  L  R  L  *  M  W  L  D  R  S  S  L  Y  I  V  Y  F  Q  K  P  C  P  A  L  Q  Q  L  F  T  R  L  A  *  R  L  P  A  *  L  T  V  S  W  *  A  W  W  I  V  L  P  Q  L  E  A  T  Q  V  G  S  P  Q  T  *  T  E  V  I  *  I  T  T  A  G  *  *  L  S  Y  V  *  L  T  S  S  I  F  *  P  F  V  D  S  L  I  S  I  T  M  M  V  G  V  A  Y  F  L  M  Q  K  R  N  T  L  R  I  G  V  F  M  V  R  N  V  Y  A  M  F  V  F  E  H  L  H  V  L  *  L  L  L  N  P  *  P  R  I  N  *  G  L  L  S  L  R  Q  R  R  R  V  P  K  N  L  T  H  M  S  I  K  F  L  V  D  E  Y  Y  F  S  *  *  L  C  *  V  S  L  T  S  K  N  E  W  I  D  Y  V  </first_frame>
            <second_frame>  F  *  H  A  Y  T  F  I  Y  L  S  K  T  S  L  F  L  P  L  S  L  E  L  T  R  K  K  E  N  G  E  *  T  R  R  R  R  V  F  T  K  S  L  T  K  F  N  K  G  W  C  K  N  H  S  F  H  Y  S :   E  *  I  M  *  E  S  S  K  F  W  F  A  T  K  H  D  T  L  Y  N  K  I  L  Q  H  G  C  C  S  C  F  S  F  V  E  F  M  V  S  T  F  K  W  I  G  Y  F  W  G  F  Y  F  *  F  L  H  W  K  I  *  G  Y  C  Y  W  N  Y  L  Q  S  N   : W  N  D  T  S  L  A  H  Y  N  I  S  T  T  Q  A  V  T  L  W  S  V  S  T  *  L  *  R  S  N  I  N  A  T  C  C  N  F  V  F  F  W  A  Y  C  H  W  C  W  F  C  *  T  L  F  S  S  I  W  C  *  S  I  R  E  Q  T  K  S  R  *  *  E  S  Y  G  Y  L  F  Q  L  V  L  C  *  C  R  N  F  N  L  C  C  N  Y  C  N  C  L  Y  P  S  A  V  W  L  A  S  W  V  W  C  P  C  F  A  H  G  F  I  C  F  R  L  F  N  W  I  S  S  L  Y  K  T  K  I  *  R  E  F  V  H  W  I  I  S  S  S  S  R  S  L  Q  K  K  T  Y  *  C  S  V  E  L  *  *  R  L  L  L  *  S  T  *  I  K  A  P  R  T  I  H  *  L  Q  :  V  F  E  *  S  L  H  N  *  R  S  S  R  G  V  E  T  *  W  K  S  F  R  S  V  E  S  L  L  C  G  T  S  R  N  N  E  V  F  S  *  S  S  S  H  V  V  H  L  Y  Y  A  S  C  V  V  R  S  A  T  F  D  I  S  T  I  D  R  G  *  T  H  Y  S  S  V  *  N  P  S  R  I  I  R  H  D  Y  R  F  F  F  D  N  L  D  G  F  L  R  S  C  S  G  S  F  T  V  *  V  Y  W  T  V  D  W  D  K  S  I  F  Q  N  G  D  W  L  I  S  G  H  C  G  Y  D  T  F  S  Y  N  R  N  H  T  T  Q  *  G  N  Q  R  R  V  *  G  *  S  E  R  C  V  K  H  V  L  Y  V  V  C  T  T  V  G  T  I  R  G  G  *  G  F  E  C  G  W  T  D  R  V  Y  I  *  S  I  S  K  N  H  V  Q  L  C  S  S  S  L  H  V  W  P  S  A  C  R  L  N  *  Q  S  L  G  E  R  G  G  *  Y  Y  L  S  W  R  Q  H  K  L  A  R  H  K  H  K  Q  R  S  S  R  L  L  L  L  A  N  N  F  L  M  C  D  *  L  P  L  F  F  S  R  L  S  I  H  *  S  A  S  P  *  W  *  E  *  L  I  S  *  C  R  R  G  T  L  *  E  *  A  F  S  W  C  V  M  C  T  L  C  L  C  L  N  I  C  M  Y  C  N  F  S  *  I  L  D  L  E  *  I  E  G  F  C  L  *  D  R  E  D  E  C  Q  K  T  S  H  I  C  Q  *  N  F  *  L  M  S  I  I  F  L  D  S  C  V  K  L  V  *  Q  V  K  M  N  G  *  I  M  * </second_frame>
            <third_frame>   F  S  M  H  I  H  L  F  I  S  Q  K  L  L  S  F  F  H  S  L  W  S  *  Q  G  R  K  K  M  G  N  K  P  E  E  E  E  F  L  L  N  H  S  Q  N  S  T  K  G  G  V  K  T  I  P  F  I  I   : V  N  E  S  C  E  R  V  A  S  F  G  L  Q  P  N  M  I  L  Y  I  T  K  F  Y  N  M  D  A  A  R  A  S  V  L  L  N  L  W  S  A  L  S  N  G  L  A  I  F  G  A  F  I  S  D  S  Y  I  G  R  F  R  A  I  A  I  G  T  I  S  S  L  I  :  G  M  I  L  L  W  L  T  T  I  F  P  Q  L  R  P  L  P  C  G  Q  Y  Q  L  D  C  N  A  A  T  S  T  Q  L  A  V  I  L  C  S  F  G  L  I  A  I  G  A  G  F  V  R  P  C  S  V  A  F  G  A  D  Q  L  E  N  K  R  N  P  D  N  E  R  V  M  D  T  Y  F  N  W  F  Y  A  S  V  G  I  S  I  S  V  A  I  T  V  I  V  Y  I  Q  V  Q  F  G  W  Q  V  G  F  G  V  P  A  L  L  M  V  L  S  V  S  V  Y  L  I  G  S  P  L  Y  I  K  P  K  S  E  G  S  L  F  T  G  L  F  Q  V  A  V  A  A  F  R  K  R  H  I  N  V  Q  L  N  Y  N  D  D  C  Y  Y  K  A  P  E  S  K  L  L  E  P  S  T  D  F  R :   C  L  N  R  A  C  I  I  E  D  P  H  V  E  L  K  P  D  G  K  A  S  D  P  W  S  L  C  F  V  E  Q  V  E  I  M  K  C  F  L  R  V  L  P  M  W  S  T  C  I  M  L  L  V  S  F  G  Q  P  L  S  I  Y  Q  L  L  T  V  D  R  H  I  T  P  Q  F  E  I  P  A  G  S  F  G  M  I  T  V  F  S  L  T  I  W  M  A  F  Y  D  R  A  V  V  P  L  L  S  R  Y  T  G  L  S  T  G  I  S  P  F  S  R  M  G  I  G  L  F  L  G  I  V  G  T  T  L  S  A  I  T  E  T  I  R  R  N  K  A  I  N  A  G  F  E  D  D  P  N  A  V  L  N  M  S  S  M  W  F  V  P  Q  L  A  L  Y  G  V  A  E  A  L  N  V  V  G  Q  I  E  F  I  Y  S  L  F  P  K  T  M  S  S  F  A  A  A  L  Y  T  F  G  L  A  L  A  G  L  I  N  S  L  L  V  S  V  V  D  S  T  T  S  A  G  G  N  T  S  W  L  A  T  N  I  N  R  G  H  L  D  Y  Y  C  W  L  I  T  F  L  C  V  I  N  F  L  Y  F  L  A  V  C  R  F  T  D  Q  H  H  H  D  G  R  S  S  L  F  P  D  A  E  E  E  H  S  E  N  R  R  F  H  G  A  *  C  V  R  Y  V  C  V  *  T  F  A  C  I  V  T  S  L  K  S  L  T  *  N  K  L  R  A  S  V  F  K  T  E  K  T  S  A  K  K  P  H  T  Y  V  N  K  I  F  S  *  *  V  L  F  F  L  I  A  V  L  S  *  F  N  K  *  K  *  M  D  R  L  C   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="3" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="13325" stop="13430"/>
                    <exon start="13517" stop="13734"/>
                    <exon start="13871" stop="14421"/>
                    <exon start="14774" stop="15671"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1770</number_coding_nucleotides>
                  <number_encoded_amino_acids>590</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>QGRKKMGNKPEEEEFLLNHSQNSTKGGVKTIPFIIVNESCERVASFGLQPNMILYITKFYNMDAARASVLLNLWSALSNGLAIFGAFISDSYIGRFRAIAIGTISSLIGMILLWLTTIFPQLRPLPCGQYQLDCNAATSTQLAVILCSFGLIAIGAGFVRPCSVAFGADQLENKRNPDNERVMDTYFNWFYASVGISISVAITVIVYIQVQFGWQVGFGVPALLMVLSVSVYLIGSPLYIKPKSEGSLFTGLFQVAVAAFRKRHINVQLNYNDDCYYKAPESKLLEPSTDFRCLNRACIIEDPHVELKPDGKASDPWSLCFVEQVEIMKCFLRVLPMWSTCIMLLVSFGQPLSIYQLLTVDRHITPQFEIPAGSFGMITVFSLTIWMAFYDRAVVPLLSRYTGLSTGISPFSRMGIGLFLGIVGTTLSAITETIRRNKAINAGFEDDPNAVLNMSSMWFVPQLALYGVAEALNVVGQIEFIYSLFPKTMSSFAAALYTFGLALAGLINSLLVSVVDSTTSAGGNTSWLATNINRGHLDYYCWLITFLCVINFLYFLAVCRFTDQHHHDGRSSLFPDAEEEHSENRRFHGA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="4" PGL_strand="+" PGL_start="19978" PGL_stop="21927"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="19978" e_stop="20924"/>
            <exon e_start="21914" e_stop="21927"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.887" acc_prob="0.575" e_score="0.996"/>
          <exon-only e_score="0.714"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="19978" e_stop="20924" e_length="947"/>
          </exon>
          <intron i_serial="1" don_prob="0.887" acc_prob="0.575">
            <gDNA_intron_boundary i_start="20925" i_stop="21913" i_length="989"/>
          </intron>
          <exon e_serial="2" e_score="0.714">
            <gDNA_exon_boundary e_start="21914" e_stop="21927" e_length="14"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="19978" stop="20924"/>
              <exon start="21914" stop="21927"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315833" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="4" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CTTTTTACGACCGTGTTTTGGTCCCTTTGCTATCTAAATATACTGGACGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGCTTATTAGTCTCGTGCATGTCTATGGCATTGTCTGCAATAACAGAAAGCATAAGACAAAAAAAGGCAATAGAGGAAGGGCATGAGGACGACCCACATGCTTTAGTGAACATGTCTGCTATGTGGCTCGTGCCACAGTATTTACTACTCGGAGTGGCTGAGGCAGCCCATGCAGTTGGACAGATTGAGTTCTTCTACTCTCTATTTCCCAAAAGCATGGCTAGCATCGCGTCAGCTATGTACACTATTGGAACTGCTGTGTCGAGTTTGTTTGGAAGTATTCTGGTGAGTGGTGTGGATTGGCTTACATCAACGGGAGGTAAAACGAGCTGGCTTTCTAGCAACATTAATAAGGGTCACTTGGATTACTATTTCTGGCTACTTGCTTTTTTGAGTTTGCTCAACTTTTTCTATTTTGTGATGGTCTGCCGGTTATATGAAACTGGGAATGATGGAAGCAGTAGGTTATCTCATGTGGCTGATGAGGAAGAATGCGACTATAGACTCTTATCTGAATCTTGATGATATGTTGTACTGCATCCTTGAATGATCCAACTACAACTAATTTAGGCAGTAGAGTGTTTTCATATATATTTTGAAGTATGTTGTGAATTTCCTCAGACAAAATTTTGGATATCAGATTGTCTTTTGTCGAATGTAGGCTTAAGAAAATGGTACTTGTTGGATTTTAAGCATCTTAATAGTATTTTAAAGTGCATAATTCCTAATGAGAAATGTCAAATTTATAGCTGCACGTTTGAAGCATATGTTGTGCAGCATTTGAGTTGTCATTTGATGACATTATATGCTCAATTACTTGTATTCGTAGTTGAATATGGTCATTAGTTGTTAGTAACTCAG : AGAAACAAAGTGAA</gDNA_template>
            <first_frame> L  F  T  T  V  F  W  S  L  C  Y  L  N  I  L  D  G  Q  E  G  *  V  L  L  P  E  W  E  L  A  Y  *  S  R  A  C  L  W  H  C  L  Q  *  Q  K  A  *  D  K  K  R  Q  *  R  K  G  M  R  T  T  H  M  L  *  *  T  C  L  L  C  G  S  C  H  S  I  Y  Y  S  E  W  L  R  Q  P  M  Q  L  D  R  L  S  S  S  T  L  Y  F  P  K  A  W  L  A  S  R  Q  L  C  T  L  L  E  L  L  C  R  V  C  L  E  V  F  W  *  V  V  W  I  G  L  H  Q  R  E  V  K  R  A  G  F  L  A  T  L  I  R  V  T  W  I  T  I  S  G  Y  L  L  F  *  V  C  S  T  F  S  I  L  *  W  S  A  G  Y  M  K  L  G  M  M  E  A  V  G  Y  L  M  W  L  M  R  K  N  A  T  I  D  S  Y  L  N  L  D  D  M  L  Y  C  I  L  E  *  S  N  Y  N  *  F  R  Q  *  S  V  F  I  Y  I  L  K  Y  V  V  N  F  L  R  Q  N  F  G  Y  Q  I  V  F  C  R  M  *  A  *  E  N  G  T  C  W  I  L  S  I  L  I  V  F  *  S  A  *  F  L  M  R  N  V  K  F  I  A  A  R  L  K  H  M  L  C  S  I  *  V  V  I  *  *  H  Y  M  L  N  Y  L  Y  S  *  L  N  M  V  I  S  C  *  *  L  R :   E  T  K  *  </first_frame>
            <second_frame>  F  L  R  P  C  F  G  P  F  A  I  *  I  Y  W  T  A  K  R  A  K  S  C  Y  P  N  G  N  W  L  I  S  L  V  H  V  Y  G  I  V  C  N  N  R  K  H  K  T  K  K  G  N  R  G  R  A  *  G  R  P  T  C  F  S  E  H  V  C  Y  V  A  R  A  T  V  F  T  T  R  S  G  *  G  S  P  C  S  W  T  D  *  V  L  L  L  S  I  S  Q  K  H  G  *  H  R  V  S  Y  V  H  Y  W  N  C  C  V  E  F  V  W  K  Y  S  G  E  W  C  G  L  A  Y  I  N  G  R  *  N  E  L  A  F  *  Q  H  *  *  G  S  L  G  L  L  F  L  A  T  C  F  F  E  F  A  Q  L  F  L  F  C  D  G  L  P  V  I  *  N  W  E  *  W  K  Q  *  V  I  S  C  G  *  *  G  R  M  R  L  *  T  L  I  *  I  L  M  I  C  C  T  A  S  L  N  D  P  T  T  T  N  L  G  S  R  V  F  S  Y  I  F  *  S  M  L  *  I  S  S  D  K  I  L  D  I  R  L  S  F  V  E  C  R  L  K  K  M  V  L  V  G  F  *  A  S  *  *  Y  F  K  V  H  N  S  *  *  E  M  S  N  L  *  L  H  V  *  S  I  C  C  A  A  F  E  L  S  F  D  D  I  I  C  S  I  T  C  I  R  S  *  I  W  S  L  V  V  S  N  S   : E  K  Q  S  E </second_frame>
            <third_frame>   F  Y  D  R  V  L  V  P  L  L  S  K  Y  T  G  R  P  R  G  L  S  P  V  T  R  M  G  I  G  L  L  V  S  C  M  S  M  A  L  S  A  I  T  E  S  I  R  Q  K  K  A  I  E  E  G  H  E  D  D  P  H  A  L  V  N  M  S  A  M  W  L  V  P  Q  Y  L  L  L  G  V  A  E  A  A  H  A  V  G  Q  I  E  F  F  Y  S  L  F  P  K  S  M  A  S  I  A  S  A  M  Y  T  I  G  T  A  V  S  S  L  F  G  S  I  L  V  S  G  V  D  W  L  T  S  T  G  G  K  T  S  W  L  S  S  N  I  N  K  G  H  L  D  Y  Y  F  W  L  L  A  F  L  S  L  L  N  F  F  Y  F  V  M  V  C  R  L  Y  E  T  G  N  D  G  S  S  R  L  S  H  V  A  D  E  E  E  C  D  Y  R  L  L  S  E  S  *  *  Y  V  V  L  H  P  *  M  I  Q  L  Q  L  I  *  A  V  E  C  F  H  I  Y  F  E  V  C  C  E  F  P  Q  T  K  F  W  I  S  D  C  L  L  S  N  V  G  L  R  K  W  Y  L  L  D  F  K  H  L  N  S  I  L  K  C  I  I  P  N  E  K  C  Q  I  Y  S  C  T  F  E  A  Y  V  V  Q  H  L  S  C  H  L  M  T  L  Y  A  Q  L  L  V  F  V  V  E  Y  G  H  *  L  L  V  T  Q  :  R  N  K  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="19980" stop="20585"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>603</number_coding_nucleotides>
                  <number_encoded_amino_acids>201</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>FYDRVLVPLLSKYTGRPRGLSPVTRMGIGLLVSCMSMALSAITESIRQKKAIEEGHEDDPHALVNMSAMWLVPQYLLLGVAEAAHAVGQIEFFYSLFPKSMASIASAMYTIGTAVSSLFGSILVSGVDWLTSTGGKTSWLSSNINKGHLDYYFWLLAFLSLLNFFYFVMVCRLYETGNDGSSRLSHVADEEECDYRLLSES*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="4" AGS_serial="1" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="20634" stop="20909"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>273</number_coding_nucleotides>
                  <number_encoded_amino_acids>91</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AVECFHIYFEVCCEFPQTKFWISDCLLSNVGLRKWYLLDFKHLNSILKCIIPNEKCQIYSCTFEAYVVQHLSCHLMTLYAQLLVFVVEYGH*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="5" PGL_strand="+" PGL_start="23160" PGL_stop="23916"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="23160" e_stop="23916"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.997"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.997">
            <gDNA_exon_boundary e_start="23160" e_stop="23916" e_length="757"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="23160" stop="23916"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315830" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="5" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TGGTCCACTGGTTTTGTGATCTTTGTGGACATGAATGTGTTTGCATTTTCCTTACTTCAAACAAAAACCATGGATAGACACATCTTCCCTCACTTTGAAGTACCAGCAGCATCATTCAGTGTGTTCTTGATTATTGCTTTGACAATCTGGATTGCTTTCTACGACCGTGTTTTGGTCCCTTTACTATCAAAATATACTGGACAGCCAAGAGGGCTAAGTCCTGTCACCAGAATGGGGATTGGCTTAATAGCCTCCAGTATGTCTATTGCATTATCAGCAATAACAGAAAGCATAAGACGACAAAGGGCAATAGAGGAAGGACATGAGGACGATCCAAATGCTTTAGTGAACATGTCTGCTATGTGGTTTGTGCCACAGTATGCACTACTCGGAGTGGCTGAGGCTGCCCATGCAGTTGGACAGATTGAGTTCTTGTATGCTCTATTACCGAAAAGCATGTCCAGCACTGCGTCAGCTATGTACACTGTTGGGACTGCTGTGTCGAGTTTGATTGGAAGTATTCTGGTGAGTAGTGTGGATTGGCTTTCATCAACGGGAGGTAAAACGAGCTGGCTTTCGAGCAACATTAACCAGGGTCACATTGATTACTTTTTCTGGCTACTTACATTTTTGAACTTGCTAAACTTGTTATATTTTTTGCTCATCTGCTGGTTTTATGAAGTTGGCAATAATGGGAGCAGTAATTCAGCTCATGTTGCTGAAGATAAAGAATGTGATTATAGACTCTTATCTGAAT</gDNA_template>
            <first_frame> W  S  T  G  F  V  I  F  V  D  M  N  V  F  A  F  S  L  L  Q  T  K  T  M  D  R  H  I  F  P  H  F  E  V  P  A  A  S  F  S  V  F  L  I  I  A  L  T  I  W  I  A  F  Y  D  R  V  L  V  P  L  L  S  K  Y  T  G  Q  P  R  G  L  S  P  V  T  R  M  G  I  G  L  I  A  S  S  M  S  I  A  L  S  A  I  T  E  S  I  R  R  Q  R  A  I  E  E  G  H  E  D  D  P  N  A  L  V  N  M  S  A  M  W  F  V  P  Q  Y  A  L  L  G  V  A  E  A  A  H  A  V  G  Q  I  E  F  L  Y  A  L  L  P  K  S  M  S  S  T  A  S  A  M  Y  T  V  G  T  A  V  S  S  L  I  G  S  I  L  V  S  S  V  D  W  L  S  S  T  G  G  K  T  S  W  L  S  S  N  I  N  Q  G  H  I  D  Y  F  F  W  L  L  T  F  L  N  L  L  N  L  L  Y  F  L  L  I  C  W  F  Y  E  V  G  N  N  G  S  S  N  S  A  H  V  A  E  D  K  E  C  D  Y  R  L  L  S  E  </first_frame>
            <second_frame>  G  P  L  V  L  *  S  L  W  T  *  M  C  L  H  F  P  Y  F  K  Q  K  P  W  I  D  T  S  S  L  T  L  K  Y  Q  Q  H  H  S  V  C  S  *  L  L  L  *  Q  S  G  L  L  S  T  T  V  F  W  S  L  Y  Y  Q  N  I  L  D  S  Q  E  G  *  V  L  S  P  E  W  G  L  A  *  *  P  P  V  C  L  L  H  Y  Q  Q  *  Q  K  A  *  D  D  K  G  Q  *  R  K  D  M  R  T  I  Q  M  L  *  *  T  C  L  L  C  G  L  C  H  S  M  H  Y  S  E  W  L  R  L  P  M  Q  L  D  R  L  S  S  C  M  L  Y  Y  R  K  A  C  P  A  L  R  Q  L  C  T  L  L  G  L  L  C  R  V  *  L  E  V  F  W  *  V  V  W  I  G  F  H  Q  R  E  V  K  R  A  G  F  R  A  T  L  T  R  V  T  L  I  T  F  S  G  Y  L  H  F  *  T  C  *  T  C  Y  I  F  C  S  S  A  G  F  M  K  L  A  I  M  G  A  V  I  Q  L  M  L  L  K  I  K  N  V  I  I  D  S  Y  L  N </second_frame>
            <third_frame>   V  H  W  F  C  D  L  C  G  H  E  C  V  C  I  F  L  T  S  N  K  N  H  G  *  T  H  L  P  S  L  *  S  T  S  S  I  I  Q  C  V  L  D  Y  C  F  D  N  L  D  C  F  L  R  P  C  F  G  P  F  T  I  K  I  Y  W  T  A  K  R  A  K  S  C  H  Q  N  G  D  W  L  N  S  L  Q  Y  V  Y  C  I  I  S  N  N  R  K  H  K  T  T  K  G  N  R  G  R  T  *  G  R  S  K  C  F  S  E  H  V  C  Y  V  V  C  A  T  V  C  T  T  R  S  G  *  G  C  P  C  S  W  T  D  *  V  L  V  C  S  I  T  E  K  H  V  Q  H  C  V  S  Y  V  H  C  W  D  C  C  V  E  F  D  W  K  Y  S  G  E  *  C  G  L  A  F  I  N  G  R  *  N  E  L  A  F  E  Q  H  *  P  G  S  H  *  L  L  F  L  A  T  Y  I  F  E  L  A  K  L  V  I  F  F  A  H  L  L  V  L  *  S  W  Q  *  W  E  Q  *  F  S  S  C  C  *  R  *  R  M  *  L  *  T  L  I  *   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="5" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="23160" stop="23915"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>756</number_coding_nucleotides>
                  <number_encoded_amino_acids>252</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WSTGFVIFVDMNVFAFSLLQTKTMDRHIFPHFEVPAASFSVFLIIALTIWIAFYDRVLVPLLSKYTGQPRGLSPVTRMGIGLIASSMSIALSAITESIRRQRAIEEGHEDDPNALVNMSAMWFVPQYALLGVAEAAHAVGQIEFLYALLPKSMSSTASAMYTVGTAVSSLIGSILVSSVDWLSSTGGKTSWLSSNINQGHIDYFFWLLTFLNLLNLLYFLLICWFYEVGNNGSSNSAHVAEDKECDYRLLSE</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="6" PGL_strand="-" PGL_start="28517" PGL_stop="26155"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="28517" e_stop="28366"/>
            <exon e_start="28282" e_stop="28065"/>
            <exon e_start="27979" e_stop="27426"/>
            <exon e_start="27343" e_stop="26367"/>
            <exon e_start="26171" e_stop="26155"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.997" acc_prob="0.995" e_score="0.868"/>
          <exon-intron don_prob="0.508" acc_prob="0.988" e_score="0.954"/>
          <exon-intron don_prob="1.000" acc_prob="0.974" e_score="0.933"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.938"/>
          <exon-only e_score="0.765"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.868">
            <gDNA_exon_boundary e_start="28517" e_stop="28366" e_length="152"/>
          </exon>
          <intron i_serial="1" don_prob="0.997" acc_prob="0.995">
            <gDNA_intron_boundary i_start="28365" i_stop="28283" i_length="83"/>
          </intron>
          <exon e_serial="2" e_score="0.954">
            <gDNA_exon_boundary e_start="28282" e_stop="28065" e_length="218"/>
          </exon>
          <intron i_serial="2" don_prob="0.508" acc_prob="0.988">
            <gDNA_intron_boundary i_start="28064" i_stop="27980" i_length="85"/>
          </intron>
          <exon e_serial="3" e_score="0.933">
            <gDNA_exon_boundary e_start="27979" e_stop="27426" e_length="554"/>
          </exon>
          <intron i_serial="3" don_prob="1.000" acc_prob="0.974">
            <gDNA_intron_boundary i_start="27425" i_stop="27344" i_length="82"/>
          </intron>
          <exon e_serial="4" e_score="0.938">
            <gDNA_exon_boundary e_start="27343" e_stop="26367" e_length="977"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="26366" i_stop="26172" i_length="195"/>
          </intron>
          <exon e_serial="5" e_score="0.765">
            <gDNA_exon_boundary e_start="26171" e_stop="26155" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="28517" stop="28366"/>
              <exon start="28282" stop="28065"/>
              <exon start="27979" stop="27426"/>
              <exon start="27343" stop="26367"/>
              <exon start="26171" stop="26155"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315831" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="26764" stop="26388"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U335348" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="6" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>TCTCTTTCCCTTTGTCTCTTTTAATCATATATCAAAGCAAAGAAAAAAAAAACTGAAGAGGAAACAGAGAACGAAACTGAAAATGGGCACTGAAATACAAGATGAAGTGAACACAAGAAAGGGTGGTCTTAGGACCATGCCATTCATCATTT : TGAATGAATCATTTGAAAGGATAGCAAGTTATGGTTCACAAACAAATCTGATAATTTATTTGATGACATATTATAGCATGAGTGCTGCTACGGGTACTAGTATTATTGGATTATGGGGTGCACTTTCAGGTGGATTAGCTATTGTTGGGGCGATTATTGCCGATTGTTATTGGGGTCGATATAATGCTGTTGCCTATGGAACCATCTTCACTTTTATT : GGAATGGTTATTCTTTGGCTCACATCAATGATACCGCAACTCACGACTTTCGCCTGTTCACATTTTCAACATGTTTGTAATGGACCAACAGCATTCCAACTTGCTGTTCTGTCTACATCATTTGCGTTTACGTCTATTGGAGCTGGTTTTGTTAGACCTTGTTCTATAATGTTTGGTGCTGATCAATTGGAACAAAAAGGGAACCCTGAGAATGAGAAGATTATTGAGAGATATTTCAATTGGTACTATGCTAGCAATGGGGTTGCAACTATGATTGCAGTTACCACAATTATTTATATTCAAGATCGTTATGGTTGGCAAATTGGCTTTGGCGTCCCTGTTTTACTCATGGTTTTGTCTATCTCAACGTTCCTAATCGGTTCTCCTCTTTATATCAAAGTGAAAACTGATACAAACAACTTGCTAGTAGGATTGTCCCAAGCATGTGTAGCAGCATTTAGAAAAAGAAAAACCCGTCTTTCATTGACTGGTTGCGATGACTACTATCATTCGCCATATGAAACAGAGGTCTTAACGCCATCAAAGGACTTCAG : GTGTTTAAATAGAGCTTGTATGATTGAAGATCGTGAAAGAGATTTGAATCCTGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACGAGTTGAATCACTCAAGGCTCTTATTAGAATAATTCCTATGTGGTCAACCGGTTTAATGGTGTTTGTGGACATGAATGTATTCGCATTTGCTGTACTTCAAACAAAGACAATGGATAGACATATCTTGCCGCACTTTGAAGTACCAGCAGCATCATTCAGTGTGTTCCTGATTATCGCTTTAACAATGTGGATTATTTTCTATGATCGTCTTTTGGTCCCTTTGCTATCTAAATATACTGGAAGTCCAAGAGGGCTAAGTCCTGTTACCCGAATGAGAATTGGGTTAACAGTCTCTTGTATGTCAATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATCACAGAAGGGCATGAGGACGATCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGTATAGCTACGGCTACACATGGAGTTGGACAAATTGAGTTCTTCTACACTCTATTACCGAAAAGCATGGCAAGCATCGCGTCTGCTATAGACACTGTTGGGAATGCAGCGTCGAGTTTGATTGGAAGTTTTCTTGTGAGTAGTGAGGATTGGCTTACATCAACAGGAGGTAAAACAAGCTGGCTTTCTAGCAACATTAATAAAGGTCACCTGGATTACCATTTCTGGCTGCTTACTTTTTTGAGTTTGCTCAACTTGTTATATTTTCATTTCATCTGCCGGTTTTATGAAACTGGGAATGATGCATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATATGTTGTACTGCATTCTTGACAGTTAATAAAGTTAGATAATGAAGTGTTTTTGTATGTTAACACCTCTACAATCTTCATATA : CAAAAATAAAAAGTAAC</gDNA_template>
            <first_frame> S  L  S  L  C  L  F  *  S  Y  I  K  A  K  K  K  K  T  E  E  E  T  E  N  E  T  E  N  G  H  *  N  T  R  *  S  E  H  K  K  G  W  S  *  D  H  A  I  H  H  F :   E  *  I  I  *  K  D  S  K  L  W  F  T  N  K  S  D  N  L  F  D  D  I  L  *  H  E  C  C  Y  G  Y  *  Y  Y  W  I  M  G  C  T  F  R  W  I  S  Y  C  W  G  D  Y  C  R  L  L  L  G  S  I  *  C  C  C  L  W  N  H  L  H  F  Y   : W  N  G  Y  S  L  A  H  I  N  D  T  A  T  H  D  F  R  L  F  T  F  S  T  C  L  *  W  T  N  S  I  P  T  C  C  S  V  Y  I  I  C  V  Y  V  Y  W  S  W  F  C  *  T  L  F  Y  N  V  W  C  *  S  I  G  T  K  R  E  P  *  E  *  E  D  Y  *  E  I  F  Q  L  V  L  C  *  Q  W  G  C  N  Y  D  C  S  Y  H  N  Y  L  Y  S  R  S  L  W  L  A  N  W  L  W  R  P  C  F  T  H  G  F  V  Y  L  N  V  P  N  R  F  S  S  L  Y  Q  S  E  N  *  Y  K  Q  L  A  S  R  I  V  P  S  M  C  S  S  I  *  K  K  K  N  P  S  F  I  D  W  L  R  *  L  L  S  F  A  I  *  N  R  G  L  N  A  I  K  G  L  Q  :  V  F  K  *  S  L  Y  D  *  R  S  *  K  R  F  E  S  *  W  I  S  F  K  S  M  E  S  V  *  C  G  T  S  *  I  T  Q  G  S  Y  *  N  N  S  Y  V  V  N  R  F  N  G  V  C  G  H  E  C  I  R  I  C  C  T  S  N  K  D  N  G  *  T  Y  L  A  A  L  *  S  T  S  S  I  I  Q  C  V  P  D  Y  R  F  N  N  V  D  Y  F  L  *  S  S  F  G  P  F  A  I  *  I  Y  W  K  S  K  R  A  K  S  C  Y  P  N  E  N  W  V  N  S  L  L  Y  V  N  G  I  V  S  N  N  R  K  H  K  T  K  K  G  N  H  R  R  A  *  G  R  S  K  C  F  S  K  H  V  C  Y  V  V  R  A  T  V  C  T  T  R  Y  S  Y  G  Y  T  W  S  W  T  N  *  V  L  L  H  S  I  T  E  K  H  G  K  H  R  V  C  Y  R  H  C  W  E  C  S  V  E  F  D  W  K  F  S  C  E  *  *  G  L  A  Y  I  N  R  R  *  N  K  L  A  F  *  Q  H  *  *  R  S  P  G  L  P  F  L  A  A  Y  F  F  E  F  A  Q  L  V  I  F  S  F  H  L  P  V  L  *  N  W  E  *  C  I  T  S  C  G  *  *  G  R  V  *  L  *  T  L  T  *  I  L  M  I  Y  V  V  L  H  S  *  Q  L  I  K  L  D  N  E  V  F  L  Y  V  N  T  S  T  I  F  I  Y :   K  N  K  K  *  </first_frame>
            <second_frame>  L  F  P  F  V  S  F  N  H  I  S  K  Q  R  K  K  K  L  K  R  K  Q  R  T  K  L  K  M  G  T  E  I  Q  D  E  V  N  T  R  K  G  G  L  R  T  M  P  F  I  I   : L  N  E  S  F  E  R  I  A  S  Y  G  S  Q  T  N  L  I  I  Y  L  M  T  Y  Y  S  M  S  A  A  T  G  T  S  I  I  G  L  W  G  A  L  S  G  G  L  A  I  V  G  A  I  I  A  D  C  Y  W  G  R  Y  N  A  V  A  Y  G  T  I  F  T  F  I  :  G  M  V  I  L  W  L  T  S  M  I  P  Q  L  T  T  F  A  C  S  H  F  Q  H  V  C  N  G  P  T  A  F  Q  L  A  V  L  S  T  S  F  A  F  T  S  I  G  A  G  F  V  R  P  C  S  I  M  F  G  A  D  Q  L  E  Q  K  G  N  P  E  N  E  K  I  I  E  R  Y  F  N  W  Y  Y  A  S  N  G  V  A  T  M  I  A  V  T  T  I  I  Y  I  Q  D  R  Y  G  W  Q  I  G  F  G  V  P  V  L  L  M  V  L  S  I  S  T  F  L  I  G  S  P  L  Y  I  K  V  K  T  D  T  N  N  L  L  V  G  L  S  Q  A  C  V  A  A  F  R  K  R  K  T  R  L  S  L  T  G  C  D  D  Y  Y  H  S  P  Y  E  T  E  V  L  T  P  S  K  D  F  R :   C  L  N  R  A  C  M  I  E  D  R  E  R  D  L  N  P  D  G  S  A  S  N  P  W  N  L  C  S  V  E  R  V  E  S  L  K  A  L  I  R  I  I  P  M  W  S  T  G  L  M  V  F  V  D  M  N  V  F  A  F  A  V  L  Q  T  K  T  M  D  R  H  I  L  P  H  F  E  V  P  A  A  S  F  S  V  F  L  I  I  A  L  T  M  W  I  I  F  Y  D  R  L  L  V  P  L  L  S  K  Y  T  G  S  P  R  G  L  S  P  V  T  R  M  R  I  G  L  T  V  S  C  M  S  M  A  L  S  A  I  T  E  S  I  R  R  K  R  A  I  T  E  G  H  E  D  D  P  N  A  L  V  N  M  S  A  M  W  F  V  P  Q  Y  A  L  L  G  I  A  T  A  T  H  G  V  G  Q  I  E  F  F  Y  T  L  L  P  K  S  M  A  S  I  A  S  A  I  D  T  V  G  N  A  A  S  S  L  I  G  S  F  L  V  S  S  E  D  W  L  T  S  T  G  G  K  T  S  W  L  S  S  N  I  N  K  G  H  L  D  Y  H  F  W  L  L  T  F  L  S  L  L  N  L  L  Y  F  H  F  I  C  R  F  Y  E  T  G  N  D  A  L  P  H  V  A  D  E  E  E  C  D  Y  R  L  L  H  E  S  *  *  Y  M  L  Y  C  I  L  D  S  *  *  S  *  I  M  K  C  F  C  M  L  T  P  L  Q  S  S  Y   : T  K  I  K  S  N </second_frame>
            <third_frame>   S  F  P  L  S  L  L  I  I  Y  Q  S  K  E  K  K  N  *  R  G  N  R  E  R  N  *  K  W  A  L  K  Y  K  M  K  *  T  Q  E  R  V  V  L  G  P  C  H  S  S  F  :  *  M  N  H  L  K  G  *  Q  V  M  V  H  K  Q  I  *  *  F  I  *  *  H  I  I  A  *  V  L  L  R  V  L  V  L  L  D  Y  G  V  H  F  Q  V  D  *  L  L  L  G  R  L  L  P  I  V  I  G  V  D  I  M  L  L  P  M  E  P  S  S  L  L  L :   E  W  L  F  F  G  S  H  Q  *  Y  R  N  S  R  L  S  P  V  H  I  F  N  M  F  V  M  D  Q  Q  H  S  N  L  L  F  C  L  H  H  L  R  L  R  L  L  E  L  V  L  L  D  L  V  L  *  C  L  V  L  I  N  W  N  K  K  G  T  L  R  M  R  R  L  L  R  D  I  S  I  G  T  M  L  A  M  G  L  Q  L  *  L  Q  L  P  Q  L  F  I  F  K  I  V  M  V  G  K  L  A  L  A  S  L  F  Y  S  W  F  C  L  S  Q  R  S  *  S  V  L  L  F  I  S  K  *  K  L  I  Q  T  T  C  *  *  D  C  P  K  H  V  *  Q  H  L  E  K  E  K  P  V  F  H  *  L  V  A  M  T  T  I  I  R  H  M  K  Q  R  S  *  R  H  Q  R  T  S   : G  V  *  I  E  L  V  *  L  K  I  V  K  E  I  *  I  L  M  D  Q  L  Q  I  H  G  I  C  V  V  W  N  E  L  N  H  S  R  L  L  L  E  *  F  L  C  G  Q  P  V  *  W  C  L  W  T  *  M  Y  S  H  L  L  Y  F  K  Q  R  Q  W  I  D  I  S  C  R  T  L  K  Y  Q  Q  H  H  S  V  C  S  *  L  S  L  *  Q  C  G  L  F  S  M  I  V  F  W  S  L  C  Y  L  N  I  L  E  V  Q  E  G  *  V  L  L  P  E  *  E  L  G  *  Q  S  L  V  C  Q  W  H  C  Q  Q  *  Q  K  A  *  D  E  K  G  Q  S  Q  K  G  M  R  T  I  Q  M  L  *  *  T  C  L  L  C  G  S  C  H  S  M  H  Y  S  V  *  L  R  L  H  M  E  L  D  K  L  S  S  S  T  L  Y  Y  R  K  A  W  Q  A  S  R  L  L  *  T  L  L  G  M  Q  R  R  V  *  L  E  V  F  L  *  V  V  R  I  G  L  H  Q  Q  E  V  K  Q  A  G  F  L  A  T  L  I  K  V  T  W  I  T  I  S  G  C  L  L  F  *  V  C  S  T  C  Y  I  F  I  S  S  A  G  F  M  K  L  G  M  M  H  Y  L  M  W  L  M  R  K  S  V  I  I  D  S  Y  M  N  L  D  D  I  C  C  T  A  F  L  T  V  N  K  V  R  *  *  S  V  F  V  C  *  H  L  Y  N  L  H  I  :  Q  K  *  K  V   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="-"/>
                <serials PGL_serial="6" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="28516" stop="28366"/>
                    <exon start="28282" stop="28065"/>
                    <exon start="27979" stop="27426"/>
                    <exon start="27343" stop="26455"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1809</number_coding_nucleotides>
                  <number_encoded_amino_acids>603</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>LFPFVSFNHISKQRKKKLKRKQRTKLKMGTEIQDEVNTRKGGLRTMPFIILNESFERIASYGSQTNLIIYLMTYYSMSAATGTSIIGLWGALSGGLAIVGAIIADCYWGRYNAVAYGTIFTFIGMVILWLTSMIPQLTTFACSHFQHVCNGPTAFQLAVLSTSFAFTSIGAGFVRPCSIMFGADQLEQKGNPENEKIIERYFNWYYASNGVATMIAVTTIIYIQDRYGWQIGFGVPVLLMVLSISTFLIGSPLYIKVKTDTNNLLVGLSQACVAAFRKRKTRLSLTGCDDYYHSPYETEVLTPSKDFRCLNRACMIEDRERDLNPDGSASNPWNLCSVERVESLKALIRIIPMWSTGLMVFVDMNVFAFAVLQTKTMDRHILPHFEVPAASFSVFLIIALTMWIIFYDRLLVPLLSKYTGSPRGLSPVTRMRIGLTVSCMSMALSAITESIRRKRAITEGHEDDPNALVNMSAMWFVPQYALLGIATATHGVGQIEFFYTLLPKSMASIASAIDTVGNAASSLIGSFLVSSEDWLTSTGGKTSWLSSNINKGHLDYHFWLLTFLSLLNLLYFHFICRFYETGNDALPHVADEEECDYRLLHES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="7" PGL_strand="+" PGL_start="30244" PGL_stop="33047"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="30244" e_stop="30420"/>
            <exon e_start="30516" e_stop="30733"/>
            <exon e_start="30815" e_stop="31368"/>
            <exon e_start="31454" e_stop="32425"/>
            <exon e_start="33029" e_stop="33047"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.994" acc_prob="0.989" e_score="0.960"/>
          <exon-intron don_prob="0.735" acc_prob="0.967" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.958" e_score="0.995"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="0.998"/>
          <exon-only e_score="0.842"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.960">
            <gDNA_exon_boundary e_start="30244" e_stop="30420" e_length="177"/>
          </exon>
          <intron i_serial="1" don_prob="0.994" acc_prob="0.989">
            <gDNA_intron_boundary i_start="30421" i_stop="30515" i_length="95"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="30516" e_stop="30733" e_length="218"/>
          </exon>
          <intron i_serial="2" don_prob="0.735" acc_prob="0.967">
            <gDNA_intron_boundary i_start="30734" i_stop="30814" i_length="81"/>
          </intron>
          <exon e_serial="3" e_score="0.995">
            <gDNA_exon_boundary e_start="30815" e_stop="31368" e_length="554"/>
          </exon>
          <intron i_serial="3" don_prob="0.997" acc_prob="0.958">
            <gDNA_intron_boundary i_start="31369" i_stop="31453" i_length="85"/>
          </intron>
          <exon e_serial="4" e_score="0.998">
            <gDNA_exon_boundary e_start="31454" e_stop="32425" e_length="972"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="32426" i_stop="33028" i_length="603"/>
          </intron>
          <exon e_serial="5" e_score="0.842">
            <gDNA_exon_boundary e_start="33029" e_stop="33047" e_length="19"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="30244" stop="30420"/>
              <exon start="30516" stop="30733"/>
              <exon start="30815" stop="31368"/>
              <exon start="31454" stop="32425"/>
              <exon start="33029" stop="33047"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315831" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="7" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>CATGGTCCTGGGGTTTAGTGTTTTTTTCTCTCTCTCTTTTTGTGTCTGCTAATCATATATTAAAGCAAAGAAGAGAAGTGAAGAGGAAACAGAAAATAGCAGTGGAAATGGGCACAGAATCACAAGCTGAAATAAACACAAGAAAGGGTGGTCTTAGGACCATGCCATTCATCATTT : TGAATGAATCATTTGAAAGGATAGCAAGTTATGGTTCACAAACAAACATGATAATTTATTTGATGACATATTATAACATGAGTGCTGCTACTGGCACTAGTATTATTGGTATATGGGGTGCACTTTCAAGTGGATTGGCTATTGTTGGGGCGATTATTGCTGATTGTTATTGGGGTCGATATAATGCTGTTGCCTATGGAACCATCTTCACTTTTATT : GGAATGGTTATTCTCTGGCTTACATCAATGATTCCGCAACTCACAACTTTGGCATGTTCTCATTTTCAACATGTTTGTAATGGACCAACAGCATTCCAGCTTGCTGTTCTGTTTACATCTTTTGTGTTTACGTCTATCGGAGCTGGTTTTGTTAGACCTTGTTCTATAATGTTTGGTGCTGATCAATTGGAACAAAAAGGCAACCCTGAAAACAAGAAGATTGTTGAGAGCTATTTCAATTGGTACTATGCTAGCACAGGGGTTGCAACTATGATTGCAGTTACCGTTATTATTTATATTCAAGATCGTTATGGTTGGCAAATTGGCTTTGGTATCCCTGTTATACTCATGGTTTTGTCTGTCTCAACGTTCCTAATCGGTTCTTCTCTTTATATCAAAGTGAAACCCGATACAAACAACTTGCTATTAGGATTGTTCCAAGCAGGTGCAGCTGCTTTTAGAAAAAGGAAAACCCCTCTTTCATTGACTGGTTGTGATGACTACTATCATTCGCCATATGAAACAGAGGTCTTAACGCCATCAAAAGACTTCAG : GTGCTTAAATAGAGCTTGTATGATTGAAGATCCTGAAAGAGATTTGAATGCTGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACGAGTTGAATCACTCAAGGCTCTTATTAGAATAATTCCTATGTGGTCAGCCGGTTTTATGATGTTTGTAGACATGAATGTATTCGCATTTTCTGTACTTCAAACAAAGACAATGGATAGACATATCTTGCCACACTTTGAAGTACCAGCAGCATCATTCAGCGTGTTCTTGATTATTGCTTTAACAATCTGGATTACTTTCTATGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGGAAGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGGTTAACAGTCTCTTGTATGTCTATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATCACAGAAGGGCATGAGGACGACCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGGATAGCTGAGGCTACCCATGGAGTTGGACAGATTGAATTCTTCTACACTCTATTACCGAAAAGCATGGCCAGCATCGCGTCAGCTATGTACACTGTTGGAACTGCTGTGTCGAGTTTGATTGGAAGTATTCTGGTGAGTAGTGAGGATTGGCTTACATCAAGGGGAGGTAAAACGAGCTGGCTTTCTAGCAACATTAATAAGGGTCACCTGGATTACCATTTCTGGTTGCTTGCTTTAATGAGTTTTCTCAACTTGTTATATTTTCTATGGGTCTGCCGGTTTTATGAGACTGGGAATGATGAATTACCTCATGTGGCTGATGAGGAAGAGTGTGATTATAGACTCTTACATGAATCTTGATGATATGTTGTACTGCATTCTTGACAGTTAATTAAGTTAGATAATAAAGTGTTCTTATATGTTAAGACCTTTACAATCTTCAT : AACTAAAAAAAAAAAGAAG</gDNA_template>
            <first_frame> H  G  P  G  V  *  C  F  F  L  S  L  F  L  C  L  L  I  I  Y  *  S  K  E  E  K  *  R  G  N  R  K  *  Q  W  K  W  A  Q  N  H  K  L  K  *  T  Q  E  R  V  V  L  G  P  C  H  S  S  F  :  *  M  N  H  L  K  G  *  Q  V  M  V  H  K  Q  T  *  *  F  I  *  *  H  I  I  T  *  V  L  L  L  A  L  V  L  L  V  Y  G  V  H  F  Q  V  D  W  L  L  L  G  R  L  L  L  I  V  I  G  V  D  I  M  L  L  P  M  E  P  S  S  L  L  L :   E  W  L  F  S  G  L  H  Q  *  F  R  N  S  Q  L  W  H  V  L  I  F  N  M  F  V  M  D  Q  Q  H  S  S  L  L  F  C  L  H  L  L  C  L  R  L  S  E  L  V  L  L  D  L  V  L  *  C  L  V  L  I  N  W  N  K  K  A  T  L  K  T  R  R  L  L  R  A  I  S  I  G  T  M  L  A  Q  G  L  Q  L  *  L  Q  L  P  L  L  F  I  F  K  I  V  M  V  G  K  L  A  L  V  S  L  L  Y  S  W  F  C  L  S  Q  R  S  *  S  V  L  L  F  I  S  K  *  N  P  I  Q  T  T  C  Y  *  D  C  S  K  Q  V  Q  L  L  L  E  K  G  K  P  L  F  H  *  L  V  V  M  T  T  I  I  R  H  M  K  Q  R  S  *  R  H  Q  K  T  S   : G  A  *  I  E  L  V  *  L  K  I  L  K  E  I  *  M  L  M  D  Q  L  Q  I  H  G  I  C  V  V  W  N  E  L  N  H  S  R  L  L  L  E  *  F  L  C  G  Q  P  V  L  *  C  L  *  T  *  M  Y  S  H  F  L  Y  F  K  Q  R  Q  W  I  D  I  S  C  H  T  L  K  Y  Q  Q  H  H  S  A  C  S  *  L  L  L  *  Q  S  G  L  L  S  M  I  V  F  W  S  L  C  Y  Q  N  I  L  E  G  Q  E  G  *  V  L  L  P  E  W  E  L  G  *  Q  S  L  V  C  L  W  H  C  Q  Q  *  Q  K  A  *  D  E  K  G  Q  S  Q  K  G  M  R  T  T  Q  M  L  *  *  T  C  L  L  C  G  S  C  H  S  M  H  Y  S  G  *  L  R  L  P  M  E  L  D  R  L  N  S  S  T  L  Y  Y  R  K  A  W  P  A  S  R  Q  L  C  T  L  L  E  L  L  C  R  V  *  L  E  V  F  W  *  V  V  R  I  G  L  H  Q  G  E  V  K  R  A  G  F  L  A  T  L  I  R  V  T  W  I  T  I  S  G  C  L  L  *  *  V  F  S  T  C  Y  I  F  Y  G  S  A  G  F  M  R  L  G  M  M  N  Y  L  M  W  L  M  R  K  S  V  I  I  D  S  Y  M  N  L  D  D  M  L  Y  C  I  L  D  S  *  L  S  *  I  I  K  C  S  Y  M  L  R  P  L  Q  S  S   : *  L  K  K  K  R   </first_frame>
            <second_frame>  M  V  L  G  F  S  V  F  F  S  L  S  F  C  V  C  *  S  Y  I  K  A  K  K  R  S  E  E  E  T  E  N  S  S  G  N  G  H  R  I  T  S  *  N  K  H  K  K  G  W  S  *  D  H  A  I  H  H  F :   E  *  I  I  *  K  D  S  K  L  W  F  T  N  K  H  D  N  L  F  D  D  I  L  *  H  E  C  C  Y  W  H  *  Y  Y  W  Y  M  G  C  T  F  K  W  I  G  Y  C  W  G  D  Y  C  *  L  L  L  G  S  I  *  C  C  C  L  W  N  H  L  H  F  Y   : W  N  G  Y  S  L  A  Y  I  N  D  S  A  T  H  N  F  G  M  F  S  F  S  T  C  L  *  W  T  N  S  I  P  A  C  C  S  V  Y  I  F  C  V  Y  V  Y  R  S  W  F  C  *  T  L  F  Y  N  V  W  C  *  S  I  G  T  K  R  Q  P  *  K  Q  E  D  C  *  E  L  F  Q  L  V  L  C  *  H  R  G  C  N  Y  D  C  S  Y  R  Y  Y  L  Y  S  R  S  L  W  L  A  N  W  L  W  Y  P  C  Y  T  H  G  F  V  C  L  N  V  P  N  R  F  F  S  L  Y  Q  S  E  T  R  Y  K  Q  L  A  I  R  I  V  P  S  R  C  S  C  F  *  K  K  E  N  P  S  F  I  D  W  L  *  *  L  L  S  F  A  I  *  N  R  G  L  N  A  I  K  R  L  Q  :  V  L  K  *  S  L  Y  D  *  R  S  *  K  R  F  E  C  *  W  I  S  F  K  S  M  E  S  V  *  C  G  T  S  *  I  T  Q  G  S  Y  *  N  N  S  Y  V  V  S  R  F  Y  D  V  C  R  H  E  C  I  R  I  F  C  T  S  N  K  D  N  G  *  T  Y  L  A  T  L  *  S  T  S  S  I  I  Q  R  V  L  D  Y  C  F  N  N  L  D  Y  F  L  *  S  C  F  G  P  F  A  I  K  I  Y  W  K  A  K  R  A  K  S  C  Y  P  N  G  N  W  V  N  S  L  L  Y  V  Y  G  I  V  S  N  N  R  K  H  K  T  K  K  G  N  H  R  R  A  *  G  R  P  K  C  F  S  K  H  V  C  Y  V  V  R  A  T  V  C  T  T  R  D  S  *  G  Y  P  W  S  W  T  D  *  I  L  L  H  S  I  T  E  K  H  G  Q  H  R  V  S  Y  V  H  C  W  N  C  C  V  E  F  D  W  K  Y  S  G  E  *  *  G  L  A  Y  I  K  G  R  *  N  E  L  A  F  *  Q  H  *  *  G  S  P  G  L  P  F  L  V  A  C  F  N  E  F  S  Q  L  V  I  F  S  M  G  L  P  V  L  *  D  W  E  *  *  I  T  S  C  G  *  *  G  R  V  *  L  *  T  L  T  *  I  L  M  I  C  C  T  A  F  L  T  V  N  *  V  R  *  *  S  V  L  I  C  *  D  L  Y  N  L  H  :  N  *  K  K  K  E  </second_frame>
            <third_frame>   W  S  W  G  L  V  F  F  S  L  S  L  F  V  S  A  N  H  I  L  K  Q  R  R  E  V  K  R  K  Q  K  I  A  V  E  M  G  T  E  S  Q  A  E  I  N  T  R  K  G  G  L  R  T  M  P  F  I  I   : L  N  E  S  F  E  R  I  A  S  Y  G  S  Q  T  N  M  I  I  Y  L  M  T  Y  Y  N  M  S  A  A  T  G  T  S  I  I  G  I  W  G  A  L  S  S  G  L  A  I  V  G  A  I  I  A  D  C  Y  W  G  R  Y  N  A  V  A  Y  G  T  I  F  T  F  I  :  G  M  V  I  L  W  L  T  S  M  I  P  Q  L  T  T  L  A  C  S  H  F  Q  H  V  C  N  G  P  T  A  F  Q  L  A  V  L  F  T  S  F  V  F  T  S  I  G  A  G  F  V  R  P  C  S  I  M  F  G  A  D  Q  L  E  Q  K  G  N  P  E  N  K  K  I  V  E  S  Y  F  N  W  Y  Y  A  S  T  G  V  A  T  M  I  A  V  T  V  I  I  Y  I  Q  D  R  Y  G  W  Q  I  G  F  G  I  P  V  I  L  M  V  L  S  V  S  T  F  L  I  G  S  S  L  Y  I  K  V  K  P  D  T  N  N  L  L  L  G  L  F  Q  A  G  A  A  A  F  R  K  R  K  T  P  L  S  L  T  G  C  D  D  Y  Y  H  S  P  Y  E  T  E  V  L  T  P  S  K  D  F  R :   C  L  N  R  A  C  M  I  E  D  P  E  R  D  L  N  A  D  G  S  A  S  N  P  W  N  L  C  S  V  E  R  V  E  S  L  K  A  L  I  R  I  I  P  M  W  S  A  G  F  M  M  F  V  D  M  N  V  F  A  F  S  V  L  Q  T  K  T  M  D  R  H  I  L  P  H  F  E  V  P  A  A  S  F  S  V  F  L  I  I  A  L  T  I  W  I  T  F  Y  D  R  V  L  V  P  L  L  S  K  Y  T  G  R  P  R  G  L  S  P  V  T  R  M  G  I  G  L  T  V  S  C  M  S  M  A  L  S  A  I  T  E  S  I  R  R  K  R  A  I  T  E  G  H  E  D  D  P  N  A  L  V  N  M  S  A  M  W  F  V  P  Q  Y  A  L  L  G  I  A  E  A  T  H  G  V  G  Q  I  E  F  F  Y  T  L  L  P  K  S  M  A  S  I  A  S  A  M  Y  T  V  G  T  A  V  S  S  L  I  G  S  I  L  V  S  S  E  D  W  L  T  S  R  G  G  K  T  S  W  L  S  S  N  I  N  K  G  H  L  D  Y  H  F  W  L  L  A  L  M  S  F  L  N  L  L  Y  F  L  W  V  C  R  F  Y  E  T  G  N  D  E  L  P  H  V  A  D  E  E  E  C  D  Y  R  L  L  H  E  S  *  *  Y  V  V  L  H  S  *  Q  L  I  K  L  D  N  K  V  F  L  Y  V  K  T  F  T  I  F  I :   T  K  K  K  K  K </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="7" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="30246" stop="30420"/>
                    <exon start="30516" stop="30733"/>
                    <exon start="30815" stop="31368"/>
                    <exon start="31454" stop="32342"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>1833</number_coding_nucleotides>
                  <number_encoded_amino_acids>611</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>WSWGLVFFSLSLFVSANHILKQRREVKRKQKIAVEMGTESQAEINTRKGGLRTMPFIILNESFERIASYGSQTNMIIYLMTYYNMSAATGTSIIGIWGALSSGLAIVGAIIADCYWGRYNAVAYGTIFTFIGMVILWLTSMIPQLTTLACSHFQHVCNGPTAFQLAVLFTSFVFTSIGAGFVRPCSIMFGADQLEQKGNPENKKIVESYFNWYYASTGVATMIAVTVIIYIQDRYGWQIGFGIPVILMVLSVSTFLIGSSLYIKVKPDTNNLLLGLFQAGAAAFRKRKTPLSLTGCDDYYHSPYETEVLTPSKDFRCLNRACMIEDPERDLNADGSASNPWNLCSVERVESLKALIRIIPMWSAGFMMFVDMNVFAFSVLQTKTMDRHILPHFEVPAASFSVFLIIALTIWITFYDRVLVPLLSKYTGRPRGLSPVTRMGIGLTVSCMSMALSAITESIRRKRAITEGHEDDPNALVNMSAMWFVPQYALLGIAEATHGVGQIEFFYTLLPKSMASIASAMYTVGTAVSSLIGSILVSSEDWLTSRGGKTSWLSSNINKGHLDYHFWLLALMSFLNLLYFLWVCRFYETGNDELPHVADEEECDYRLLHES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="8" PGL_strand="+" PGL_start="35313" PGL_stop="35992"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="35313" e_stop="35992"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.996"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.996">
            <gDNA_exon_boundary e_start="35313" e_stop="35992" e_length="680"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="35313" stop="35992"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315829" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="8" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ACGATCGTGTTTTGGTCCCTTTGCTATCAAAATATACTGGAAGGCCAAGAGGGCTAAGTCCTGTTACCCGAATGGGAATTGGGTTAACAGTCTCTTGTATGTCTATGGCATTGTCAGCAATAACAGAAAGCATAAGACGAAAAAGGGCAATAGCGGAAGGGCATGAAGACGATCCAAATGCTTTAGTAAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTCGGAATAGCTGAGGCTACCCATGGAGTTGGACAGATTGAGTTTTTCTACACTCTATTACCGAAAAGCATGGCAAGCATCGCGTCAGCTATGTACACCGTTGGGACTGCTGTGTCGAGTTTGACTGGAAGTATTCTGGTGAGTAGTGAAGATTGGCTTACATCAAGGGGAGGTAAAACGAGCTGGCTTTCGAGCAACATTAATAAGGGTCACCTGGATTACCATTTCTGGGTGCTTGCTTCTATGAGTTTTCTCAACCTGCTATATTTTCTAGTTGTCTGCCGGTTTTATGATACTGGGAAGGATGAGATGAGTAGATCACCTCATGTGGCTGATGAGAAAGAATGCGATTATAGACTCTTACATGAATCTTGATGATATATTGTATTGCATCCTTGAATGATCCAACAACTACTAATTGAGTTGGACAATAAAGTTTTTCATATGTTAAGA</gDNA_template>
            <first_frame> T  I  V  F  W  S  L  C  Y  Q  N  I  L  E  G  Q  E  G  *  V  L  L  P  E  W  E  L  G  *  Q  S  L  V  C  L  W  H  C  Q  Q  *  Q  K  A  *  D  E  K  G  Q  *  R  K  G  M  K  T  I  Q  M  L  *  *  T  C  L  L  C  G  S  C  H  S  M  H  Y  S  E  *  L  R  L  P  M  E  L  D  R  L  S  F  S  T  L  Y  Y  R  K  A  W  Q  A  S  R  Q  L  C  T  P  L  G  L  L  C  R  V  *  L  E  V  F  W  *  V  V  K  I  G  L  H  Q  G  E  V  K  R  A  G  F  R  A  T  L  I  R  V  T  W  I  T  I  S  G  C  L  L  L  *  V  F  S  T  C  Y  I  F  *  L  S  A  G  F  M  I  L  G  R  M  R  *  V  D  H  L  M  W  L  M  R  K  N  A  I  I  D  S  Y  M  N  L  D  D  I  L  Y  C  I  L  E  *  S  N  N  Y  *  L  S  W  T  I  K  F  F  I  C  *   </first_frame>
            <second_frame>  R  S  C  F  G  P  F  A  I  K  I  Y  W  K  A  K  R  A  K  S  C  Y  P  N  G  N  W  V  N  S  L  L  Y  V  Y  G  I  V  S  N  N  R  K  H  K  T  K  K  G  N  S  G  R  A  *  R  R  S  K  C  F  S  K  H  V  C  Y  V  V  R  A  T  V  C  T  T  R  N  S  *  G  Y  P  W  S  W  T  D  *  V  F  L  H  S  I  T  E  K  H  G  K  H  R  V  S  Y  V  H  R  W  D  C  C  V  E  F  D  W  K  Y  S  G  E  *  *  R  L  A  Y  I  K  G  R  *  N  E  L  A  F  E  Q  H  *  *  G  S  P  G  L  P  F  L  G  A  C  F  Y  E  F  S  Q  P  A  I  F  S  S  C  L  P  V  L  *  Y  W  E  G  *  D  E  *  I  T  S  C  G  *  *  E  R  M  R  L  *  T  L  T  *  I  L  M  I  Y  C  I  A  S  L  N  D  P  T  T  T  N  *  V  G  Q  *  S  F  S  Y  V  K  </second_frame>
            <third_frame>   D  R  V  L  V  P  L  L  S  K  Y  T  G  R  P  R  G  L  S  P  V  T  R  M  G  I  G  L  T  V  S  C  M  S  M  A  L  S  A  I  T  E  S  I  R  R  K  R  A  I  A  E  G  H  E  D  D  P  N  A  L  V  N  M  S  A  M  W  F  V  P  Q  Y  A  L  L  G  I  A  E  A  T  H  G  V  G  Q  I  E  F  F  Y  T  L  L  P  K  S  M  A  S  I  A  S  A  M  Y  T  V  G  T  A  V  S  S  L  T  G  S  I  L  V  S  S  E  D  W  L  T  S  R  G  G  K  T  S  W  L  S  S  N  I  N  K  G  H  L  D  Y  H  F  W  V  L  A  S  M  S  F  L  N  L  L  Y  F  L  V  V  C  R  F  Y  D  T  G  K  D  E  M  S  R  S  P  H  V  A  D  E  K  E  C  D  Y  R  L  L  H  E  S  *  *  Y  I  V  L  H  P  *  M  I  Q  Q  L  L  I  E  L  D  N  K  V  F  H  M  L  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="8" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="35315" stop="35914"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>597</number_coding_nucleotides>
                  <number_encoded_amino_acids>199</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>DRVLVPLLSKYTGRPRGLSPVTRMGIGLTVSCMSMALSAITESIRRKRAIAEGHEDDPNALVNMSAMWFVPQYALLGIAEATHGVGQIEFFYTLLPKSMASIASAMYTVGTAVSSLTGSILVSSEDWLTSRGGKTSWLSSNINKGHLDYHFWVLASMSFLNLLYFLVVCRFYDTGKDEMSRSPHVADEKECDYRLLHES*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="9" PGL_strand="+" PGL_start="37450" PGL_stop="38709"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="37450" e_stop="38709"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="37450" e_stop="38709" e_length="1260"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="37450" stop="38709"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U318735" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="9" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGAGAAAATCAAAGAACTAAAGCATACAATGAGTACTACTTTAAAGGTATTGATGTTCCCATTTTTGGCTTATGGACACATATCTCCATATCTAAACGTAGCTAAGAAGCTTGCGGACAGAGGATTCTTGATTTACTTGTGTTCAACACCGATAAATCTCAAATCCACCATCAACAAAATCCCCGAAAAGTATGCTGATTCGATTCAGCTTATCGAACTTCACTTACCAGAATTACCCGAACTTCCTCCTCATTACCATACCACCAATGGTCTCCCACCCAATCTCAATCACATCCTTCGTAGAGCCCTGAAAATGTCGAAACCAAACTTCTCGAAAATCATGCAAAATCTGAAACCTGATTTGTTGATTTACGACATATTGCAGCAATGGGCTGAAGATGTGGCTACTGAACTAAACATTCCAGCAGTTAAGCTTTTGACTTCGGGTGTTGCTGTGTTTTCGTATTTTTTCAACTTAACGAAGAAACCAGAGGTTGAATTCCCTTACCCTGCTATTTATCTCAGGAAAATTGAGCTAGTTAGATGGTGTGAAACGTTGTCAAAACATAACAAAGAGGGAGAAGAACATGATGATGGTTTAGCTTATGGAAATATGCAAATCATGTTGATGAGTACTTCTAAAATTTTAGAAGCCAAATATATTGATTATTGCATTGAACTGACAAATTGGAAAGTTGTTCCAGTTGGTTCACTAGTTCAAGATTCAATCACTAATGACGCGGCGGACGATGACATGGAGTTAATAGATTGGCTAGGAACAAAAGATGAGAATTCAACTGTTTTCGTCTCCTTTGGGAGTGAGTATTTCTTGTCAAAAGAAGATGTGGAAGAAGTAGCTTTCGGGTTGGAGTTAAGTAATGTTAATTTCATATGGGTTGTAAGATTTCCGAAAGGTGAAGAGAAAAATCTTGAAGATGTATTACCAAAAGGTTTTTTTGAAAGAATTGGAGAGAGGGGAAGAGTTTTGGACAAATTTGCACCACAACCAAGAATTCTAAATCATCCGAGTACGGGAGGATTTATAAGTCATTGTGGTTGGAATTCAGCGATGGAAAGTATAGATTTTGGGGTACCTATAGTTGCCATGCCTATGCAACTTGATCAACCAATGAATGCTAGGTTGATAGTAGAATTGGGAGTCGCAGTTGAGATTGTTAGAGATGATGATGGAAAAATTTACAGAGGAGAAATCGCGGAAACTCTTAAAGGTGTCATAACGGGGGAAATTGGGGAAATTTT</gDNA_template>
            <first_frame> R  E  N  Q  R  T  K  A  Y  N  E  Y  Y  F  K  G  I  D  V  P  I  F  G  L  W  T  H  I  S  I  S  K  R  S  *  E  A  C  G  Q  R  I  L  D  L  L  V  F  N  T  D  K  S  Q  I  H  H  Q  Q  N  P  R  K  V  C  *  F  D  S  A  Y  R  T  S  L  T  R  I  T  R  T  S  S  S  L  P  Y  H  Q  W  S  P  T  Q  S  Q  S  H  P  S  *  S  P  E  N  V  E  T  K  L  L  E  N  H  A  K  S  E  T  *  F  V  D  L  R  H  I  A  A  M  G  *  R  C  G  Y  *  T  K  H  S  S  S  *  A  F  D  F  G  C  C  C  V  F  V  F  F  Q  L  N  E  E  T  R  G  *  I  P  L  P  C  Y  L  S  Q  E  N  *  A  S  *  M  V  *  N  V  V  K  T  *  Q  R  G  R  R  T  *  *  W  F  S  L  W  K  Y  A  N  H  V  D  E  Y  F  *  N  F  R  S  Q  I  Y  *  L  L  H  *  T  D  K  L  E  S  C  S  S  W  F  T  S  S  R  F  N  H  *  *  R  G  G  R  *  H  G  V  N  R  L  A  R  N  K  R  *  E  F  N  C  F  R  L  L  W  E  *  V  F  L  V  K  R  R  C  G  R  S  S  F  R  V  G  V  K  *  C  *  F  H  M  G  C  K  I  S  E  R  *  R  E  K  S  *  R  C  I  T  K  R  F  F  *  K  N  W  R  E  G  K  S  F  G  Q  I  C  T  T  T  K  N  S  K  S  S  E  Y  G  R  I  Y  K  S  L  W  L  E  F  S  D  G  K  Y  R  F  W  G  T  Y  S  C  H  A  Y  A  T  *  S  T  N  E  C  *  V  D  S  R  I  G  S  R  S  *  D  C  *  R  *  *  W  K  N  L  Q  R  R  N  R  G  N  S  *  R  C  H  N  G  G  N  W  G  N  F </first_frame>
            <second_frame>  E  K  I  K  E  L  K  H  T  M  S  T  T  L  K  V  L  M  F  P  F  L  A  Y  G  H  I  S  P  Y  L  N  V  A  K  K  L  A  D  R  G  F  L  I  Y  L  C  S  T  P  I  N  L  K  S  T  I  N  K  I  P  E  K  Y  A  D  S  I  Q  L  I  E  L  H  L  P  E  L  P  E  L  P  P  H  Y  H  T  T  N  G  L  P  P  N  L  N  H  I  L  R  R  A  L  K  M  S  K  P  N  F  S  K  I  M  Q  N  L  K  P  D  L  L  I  Y  D  I  L  Q  Q  W  A  E  D  V  A  T  E  L  N  I  P  A  V  K  L  L  T  S  G  V  A  V  F  S  Y  F  F  N  L  T  K  K  P  E  V  E  F  P  Y  P  A  I  Y  L  R  K  I  E  L  V  R  W  C  E  T  L  S  K  H  N  K  E  G  E  E  H  D  D  G  L  A  Y  G  N  M  Q  I  M  L  M  S  T  S  K  I  L  E  A  K  Y  I  D  Y  C  I  E  L  T  N  W  K  V  V  P  V  G  S  L  V  Q  D  S  I  T  N  D  A  A  D  D  D  M  E  L  I  D  W  L  G  T  K  D  E  N  S  T  V  F  V  S  F  G  S  E  Y  F  L  S  K  E  D  V  E  E  V  A  F  G  L  E  L  S  N  V  N  F  I  W  V  V  R  F  P  K  G  E  E  K  N  L  E  D  V  L  P  K  G  F  F  E  R  I  G  E  R  G  R  V  L  D  K  F  A  P  Q  P  R  I  L  N  H  P  S  T  G  G  F  I  S  H  C  G  W  N  S  A  M  E  S  I  D  F  G  V  P  I  V  A  M  P  M  Q  L  D  Q  P  M  N  A  R  L  I  V  E  L  G  V  A  V  E  I  V  R  D  D  D  G  K  I  Y  R  G  E  I  A  E  T  L  K  G  V  I  T  G  E  I  G  E  I   </second_frame>
            <third_frame>   R  K  S  K  N  *  S  I  Q  *  V  L  L  *  R  Y  *  C  S  H  F  W  L  M  D  T  Y  L  H  I  *  T  *  L  R  S  L  R  T  E  D  S  *  F  T  C  V  Q  H  R  *  I  S  N  P  P  S  T  K  S  P  K  S  M  L  I  R  F  S  L  S  N  F  T  Y  Q  N  Y  P  N  F  L  L  I  T  I  P  P  M  V  S  H  P  I  S  I  T  S  F  V  E  P  *  K  C  R  N  Q  T  S  R  K  S  C  K  I  *  N  L  I  C  *  F  T  T  Y  C  S  N  G  L  K  M  W  L  L  N  *  T  F  Q  Q  L  S  F  *  L  R  V  L  L  C  F  R  I  F  S  T  *  R  R  N  Q  R  L  N  S  L  T  L  L  F  I  S  G  K  L  S  *  L  D  G  V  K  R  C  Q  N  I  T  K  R  E  K  N  M  M  M  V  *  L  M  E  I  C  K  S  C  *  *  V  L  L  K  F  *  K  P  N  I  L  I  I  A  L  N  *  Q  I  G  K  L  F  Q  L  V  H  *  F  K  I  Q  S  L  M  T  R  R  T  M  T  W  S  *  *  I  G  *  E  Q  K  M  R  I  Q  L  F  S  S  P  L  G  V  S  I  S  C  Q  K  K  M  W  K  K  *  L  S  G  W  S  *  V  M  L  I  S  Y  G  L  *  D  F  R  K  V  K  R  K  I  L  K  M  Y  Y  Q  K  V  F  L  K  E  L  E  R  G  E  E  F  W  T  N  L  H  H  N  Q  E  F  *  I  I  R  V  R  E  D  L  *  V  I  V  V  G  I  Q  R  W  K  V  *  I  L  G  Y  L  *  L  P  C  L  C  N  L  I  N  Q  *  M  L  G  *  *  *  N  W  E  S  Q  L  R  L  L  E  M  M  M  E  K  F  T  E  E  K  S  R  K  L  L  K  V  S  *  R  G  K  L  G  K  F  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="9" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="37451" stop="38707"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>1257</number_coding_nucleotides>
                  <number_encoded_amino_acids>419</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>EKIKELKHTMSTTLKVLMFPFLAYGHISPYLNVAKKLADRGFLIYLCSTPINLKSTINKIPEKYADSIQLIELHLPELPELPPHYHTTNGLPPNLNHILRRALKMSKPNFSKIMQNLKPDLLIYDILQQWAEDVATELNIPAVKLLTSGVAVFSYFFNLTKKPEVEFPYPAIYLRKIELVRWCETLSKHNKEGEEHDDGLAYGNMQIMLMSTSKILEAKYIDYCIELTNWKVVPVGSLVQDSITNDAADDDMELIDWLGTKDENSTVFVSFGSEYFLSKEDVEEVAFGLELSNVNFIWVVRFPKGEEKNLEDVLPKGFFERIGERGRVLDKFAPQPRILNHPSTGGFISHCGWNSAMESIDFGVPIVAMPMQLDQPMNARLIVELGVAVEIVRDDDGKIYRGEIAETLKGVITGEIGEI</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="10" PGL_strand="+" PGL_start="40713" PGL_stop="41412"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="40713" e_stop="40814"/>
            <exon e_start="40887" e_stop="41412"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.992" acc_prob="0.980" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="40713" e_stop="40814" e_length="102"/>
          </exon>
          <intron i_serial="1" don_prob="0.992" acc_prob="0.980">
            <gDNA_intron_boundary i_start="40815" i_stop="40886" i_length="72"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="40887" e_stop="41412" e_length="526"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="40713" stop="40814"/>
              <exon start="40887" stop="41412"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U315832" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="10" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AGCTTTTAGGAAAAGAAATACCCGTCTTTCATCGACTAACTATGATGAATTGTATCGTTGGCCACTTGAATCAGAGGTCTTGCCTCCATCAAAGGACTTTAG : GTGTTTAAATAGAGCTTGCATAATTGAAGATCCTCAACGAGATTTGAATCCCGATGGATCAGCTTCAAATCCATGGAATCTGTGTAGTGTGGAACAAGTTGAATCACTCAAAGCTCTTATTAAAGCACTTCCTATGTGGTCTACCTGTTTCATGATTTTCGTGGATATGAATATATTTTCATTTTCCTTGCTTCAAACCAAGACGATGGATAGACACATCTTCCCTCACTTACAAGTACCAGCAGCATCATTCAGTGTGTTTATGATTACTGCTTTAACAATCTGGATTGCTTTCTACGACCGTGTTTTGATCCCTTTGCTATCAAAATATACTGGACAGCCTAGAGGGCTAAGTCCTGTTACCAGAATGGGGATTGGGTTAATAGCTTCCGGTATGTCTATTGCATTGTCAGCAATAACAGAAAGCATAAGACGACAAAGGGCAATAGAGGAAGGACATGAGGACGATCCAAATGCTTTAGTGAACATGTCTGCTATGTGGTTCGTGCCACAGTATGCACTACTC</gDNA_template>
            <first_frame> S  F  *  E  K  K  Y  P  S  F  I  D  *  L  *  *  I  V  S  L  A  T  *  I  R  G  L  A  S  I  K  G  L  *  :  V  F  K  *  S  L  H  N  *  R  S  S  T  R  F  E  S  R  W  I  S  F  K  S  M  E  S  V  *  C  G  T  S  *  I  T  Q  S  S  Y  *  S  T  S  Y  V  V  Y  L  F  H  D  F  R  G  Y  E  Y  I  F  I  F  L  A  S  N  Q  D  D  G  *  T  H  L  P  S  L  T  S  T  S  S  I  I  Q  C  V  Y  D  Y  C  F  N  N  L  D  C  F  L  R  P  C  F  D  P  F  A  I  K  I  Y  W  T  A  *  R  A  K  S  C  Y  Q  N  G  D  W  V  N  S  F  R  Y  V  Y  C  I  V  S  N  N  R  K  H  K  T  T  K  G  N  R  G  R  T  *  G  R  S  K  C  F  S  E  H  V  C  Y  V  V  R  A  T  V  C  T  T  </first_frame>
            <second_frame>  A  F  R  K  R  N  T  R  L  S  S  T  N  Y  D  E  L  Y  R  W  P  L  E  S  E  V  L  P  P  S  K  D  F  R :   C  L  N  R  A  C  I  I  E  D  P  Q  R  D  L  N  P  D  G  S  A  S  N  P  W  N  L  C  S  V  E  Q  V  E  S  L  K  A  L  I  K  A  L  P  M  W  S  T  C  F  M  I  F  V  D  M  N  I  F  S  F  S  L  L  Q  T  K  T  M  D  R  H  I  F  P  H  L  Q  V  P  A  A  S  F  S  V  F  M  I  T  A  L  T  I  W  I  A  F  Y  D  R  V  L  I  P  L  L  S  K  Y  T  G  Q  P  R  G  L  S  P  V  T  R  M  G  I  G  L  I  A  S  G  M  S  I  A  L  S  A  I  T  E  S  I  R  R  Q  R  A  I  E  E  G  H  E  D  D  P  N  A  L  V  N  M  S  A  M  W  F  V  P  Q  Y  A  L  L </second_frame>
            <third_frame>   L  L  G  K  E  I  P  V  F  H  R  L  T  M  M  N  C  I  V  G  H  L  N  Q  R  S  C  L  H  Q  R  T  L   : G  V  *  I  E  L  A  *  L  K  I  L  N  E  I  *  I  P  M  D  Q  L  Q  I  H  G  I  C  V  V  W  N  K  L  N  H  S  K  L  L  L  K  H  F  L  C  G  L  P  V  S  *  F  S  W  I  *  I  Y  F  H  F  P  C  F  K  P  R  R  W  I  D  T  S  S  L  T  Y  K  Y  Q  Q  H  H  S  V  C  L  *  L  L  L  *  Q  S  G  L  L  S  T  T  V  F  *  S  L  C  Y  Q  N  I  L  D  S  L  E  G  *  V  L  L  P  E  W  G  L  G  *  *  L  P  V  C  L  L  H  C  Q  Q  *  Q  K  A  *  D  D  K  G  Q  *  R  K  D  M  R  T  I  Q  M  L  *  *  T  C  L  L  C  G  S  C  H  S  M  H  Y   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="10" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="40714" stop="40814"/>
                    <exon start="40887" stop="41412"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>627</number_coding_nucleotides>
                  <number_encoded_amino_acids>209</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFRKRNTRLSSTNYDELYRWPLESEVLPPSKDFRCLNRACIIEDPQRDLNPDGSASNPWNLCSVEQVESLKALIKALPMWSTCFMIFVDMNIFSFSLLQTKTMDRHIFPHLQVPAASFSVFMITALTIWIAFYDRVLIPLLSKYTGQPRGLSPVTRMGIGLIASGMSIALSAITESIRRQRAIEEGHEDDPNALVNMSAMWFVPQYALL</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="11" PGL_strand="+" PGL_start="57223" PGL_stop="57647"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="57223" e_stop="57647"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.981"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.981">
            <gDNA_exon_boundary e_start="57223" e_stop="57647" e_length="425"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="57223" stop="57647"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U338087" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="11" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>ATTTTTCAGAGAGAGTTTTTCAGCAGCCAAAAGAGAGAAAAAAGAGAGAAATTCGCAGTAAAAAATCCAGCCATAACAACCAACTTCAAATTGTGATTCCCGCTTCGTTTCTTGTCCGATTGAGCTGATTTTTGGACAGCATATTATCTTCATCTCAATCTTTGATTAGGAACTGACAGAGTTGGATTTGGTGGTCTGCAGCTTCAGTTTTGCTGTCGTGAACAGTAGCTGCGAAATTGGTGATTTTGCTCCTTTAATTCTCTAGATTTGGTGCAATCTTATTTTGTTGTTGCTCGTTGTTTGGCACTTTGTTTTGTGGCCAATTTTGGAGAACAATATTGTAACTCTTGGTGATTATAGTGGAGCTTTTGGTCCCGTGGTTTTTTACTCTTCACATCGAAGGGCTTTCCACGTAAATCTTGGTG</gDNA_template>
            <first_frame> I  F  Q  R  E  F  F  S  S  Q  K  R  E  K  R  E  K  F  A  V  K  N  P  A  I  T  T  N  F  K  L  *  F  P  L  R  F  L  S  D  *  A  D  F  W  T  A  Y  Y  L  H  L  N  L  *  L  G  T  D  R  V  G  F  G  G  L  Q  L  Q  F  C  C  R  E  Q  *  L  R  N  W  *  F  C  S  F  N  S  L  D  L  V  Q  S  Y  F  V  V  A  R  C  L  A  L  C  F  V  A  N  F  G  E  Q  Y  C  N  S  W  *  L  *  W  S  F  W  S  R  G  F  L  L  F  T  S  K  G  F  P  R  K  S  W   </first_frame>
            <second_frame>  F  F  R  E  S  F  S  A  A  K  R  E  K  K  E  R  N  S  Q  *  K  I  Q  P  *  Q  P  T  S  N  C  D  S  R  F  V  S  C  P  I  E  L  I  F  G  Q  H  I  I  F  I  S  I  F  D  *  E  L  T  E  L  D  L  V  V  C  S  F  S  F  A  V  V  N  S  S  C  E  I  G  D  F  A  P  L  I  L  *  I  W  C  N  L  I  L  L  L  L  V  V  W  H  F  V  L  W  P  I  L  E  N  N  I  V  T  L  G  D  Y  S  G  A  F  G  P  V  V  F  Y  S  S  H  R  R  A  F  H  V  N  L  G  </second_frame>
            <third_frame>   F  S  E  R  V  F  Q  Q  P  K  E  R  K  K  R  E  I  R  S  K  K  S  S  H  N  N  Q  L  Q  I  V  I  P  A  S  F  L  V  R  L  S  *  F  L  D  S  I  L  S  S  S  Q  S  L  I  R  N  *  Q  S  W  I  W  W  S  A  A  S  V  L  L  S  *  T  V  A  A  K  L  V  I  L  L  L  *  F  S  R  F  G  A  I  L  F  C  C  C  S  L  F  G  T  L  F  C  G  Q  F  W  R  T  I  L  *  L  L  V  I  I  V  E  L  L  V  P  W  F  F  T  L  H  I  E  G  L  S  T  *  I  L  V </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <none gDNA_id="C05HBa0042B19.1"/>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="12" PGL_strand="+" PGL_start="58282" PGL_stop="63312"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="58282" e_stop="58979"/>
            <exon e_start="59606" e_stop="59896"/>
            <exon e_start="62617" e_stop="63312"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.998" acc_prob="0.977" e_score="1.000"/>
          <exon-intron don_prob="0.972" acc_prob="0.969" e_score="1.000"/>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="58282" e_stop="58979" e_length="698"/>
          </exon>
          <intron i_serial="1" don_prob="0.998" acc_prob="0.977">
            <gDNA_intron_boundary i_start="58980" i_stop="59605" i_length="626"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="59606" e_stop="59896" e_length="291"/>
          </exon>
          <intron i_serial="2" don_prob="0.972" acc_prob="0.969">
            <gDNA_intron_boundary i_start="59897" i_stop="62616" i_length="2720"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="62617" e_stop="63312" e_length="696"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="58282" stop="58979"/>
              <exon start="59606" stop="59896"/>
              <exon start="62617" stop="63312"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U322072" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GTTCAGCCACTCCCTTCTTCTTCTTCAATGGCTGCTGCAATTTCTTTATCATTTTCTTTAGACCCTCAAACTCAACACAATTACCATCATCGTTTTCACCATAATACTAGCTTCAATTCACATAAAGCTTCAATCTTTACCCCAAAATATACATTCCCTTTTGTAATCTCATCAAAATCACACACTTCAAATCTGATTATCCCACTTTCAACATCCCAATCTTCTTCATCTTCTTCCTCAACATCTCCATCATCAGTCTTCCAAACCCCACTTCAAACAGGTAGATTTCTCACAAATCAAGAACTTGAAAAGCTTGAATCTTTAGGGAAATATAGGTATTTTCAAGAATTGGAATCTGGATCATTGTGGGTTCGTGTGATGAGGGAAGAAGAAATGGATGTTACTGTTTGGTTGTTGGCTGAGTCTTTTTCTGATTCTATGTTGATGCCTAAAGGGTATGTGAAATTCATGGCATATTTAGTGAAGCAGTATATGATTGAGAGAAGAGCACTAATGCCTTATACTGCTACACTTCTTGGATTCTATAGAGAAAATGGAGAAGATGCAGATTTGCAATTGGCTGGAACTGTGGAAGTGTGTTTTGACAAAAGGGGTGCTAATGCTAATTCTCCCACACCTACACCTCCCAAGAACTCTCCATACATTTGCAATATGACAGTAGATAAGCTGCTTAGGAG : AAGGGGCATAGGTTGGCATCTGTTGAAAGCAAGCGAGGAACTAATTTCTCAAATGAGTTCTTCTAGAGAGGTTTACTTGCACTGTCGAATGATTGATACTGCTCCACTCAACATGTATAGAAAAGCTGGATATACCATTGTTGAGACAGACAACATTTTTATCTTGTTGGCATTGCAGCGACGGAAGCACTTGATGTGGAAAGTCCTTCCAGATTCAGAAAGCCTTTCTGAAGTTGATGAATGCACTTCTTCAGTAGACACGTGAACATGTAAACATAGACAAGTTTTGAG : GTGGATTCTGGTCTTCGATTTGCCAATATTCTACAGGTTTATATATCCCTGAAAACAATCATGTTGAACTTTATAACATGCAGAAGCTATATGCAACTCTGTGAAGTAATATGATGCAGCACAGGCAATCACAATAGCGTGATAAACATTGCTGCTCTATTAAGAAGATGAAGGATAATGAAGAGGCTGGAAACATACAAGGATTTAGCATATCCTCAGACTTGCTTCTCCTACGTTTGTTCCACGCTGACACCAAACCAAAAGGCATGATAACTGTTCTTTCTATTGATTCAGATGCTTTCTTGTGTGTTCAATGATGTATTACATTTGATAAGACAGTAAACATTGATGGAGAAAAGGATACAAGTTTCTAAGCTGTAGAGAAATTAATGAGAAGAAAACAAAACAACTCGAAAACTACTGAATAATTATGCATTAAAACAGAAAACCAGCTGAAGGAGAAAGAAGAATGAAAAAATAGATATAGAAGTATATTGGAAAGAGGAGATGGATAGAGTTGTATGAGAATCCTGTTGGAGTATGTACAAAGCAAGTGAGAAGTTTAGCTTATGACAAGTACTTGACATTTTAACAGCTTGTTTGGATGGTTGTTATTACCTATTGTATTCTGTTTTTCTGTTTAGTTTTAATATAACGTTTGTTTTAACTGTTACTCTGAATCGTTTTTTTTCTCCA</gDNA_template>
            <first_frame> V  Q  P  L  P  S  S  S  S  M  A  A  A  I  S  L  S  F  S  L  D  P  Q  T  Q  H  N  Y  H  H  R  F  H  H  N  T  S  F  N  S  H  K  A  S  I  F  T  P  K  Y  T  F  P  F  V  I  S  S  K  S  H  T  S  N  L  I  I  P  L  S  T  S  Q  S  S  S  S  S  S  S  T  S  P  S  S  V  F  Q  T  P  L  Q  T  G  R  F  L  T  N  Q  E  L  E  K  L  E  S  L  G  K  Y  R  Y  F  Q  E  L  E  S  G  S  L  W  V  R  V  M  R  E  E  E  M  D  V  T  V  W  L  L  A  E  S  F  S  D  S  M  L  M  P  K  G  Y  V  K  F  M  A  Y  L  V  K  Q  Y  M  I  E  R  R  A  L  M  P  Y  T  A  T  L  L  G  F  Y  R  E  N  G  E  D  A  D  L  Q  L  A  G  T  V  E  V  C  F  D  K  R  G  A  N  A  N  S  P  T  P  T  P  P  K  N  S  P  Y  I  C  N  M  T  V  D  K  L  L  R  R :   R  G  I  G  W  H  L  L  K  A  S  E  E  L  I  S  Q  M  S  S  S  R  E  V  Y  L  H  C  R  M  I  D  T  A  P  L  N  M  Y  R  K  A  G  Y  T  I  V  E  T  D  N  I  F  I  L  L  A  L  Q  R  R  K  H  L  M  W  K  V  L  P  D  S  E  S  L  S  E  V  D  E  C  T  S  S  V  D  T  *  T  C  K  H  R  Q  V  L  R :   W  I  L  V  F  D  L  P  I  F  Y  R  F  I  Y  P  *  K  Q  S  C  *  T  L  *  H  A  E  A  I  C  N  S  V  K  *  Y  D  A  A  Q  A  I  T  I  A  *  *  T  L  L  L  Y  *  E  D  E  G  *  *  R  G  W  K  H  T  R  I  *  H  I  L  R  L  A  S  P  T  F  V  P  R  *  H  Q  T  K  R  H  D  N  C  S  F  Y  *  F  R  C  F  L  V  C  S  M  M  Y  Y  I  *  *  D  S  K  H  *  W  R  K  G  Y  K  F  L  S  C  R  E  I  N  E  K  K  T  K  Q  L  E  N  Y  *  I  I  M  H  *  N  R  K  P  A  E  G  E  R  R  M  K  K  *  I  *  K  Y  I  G  K  R  R  W  I  E  L  Y  E  N  P  V  G  V  C  T  K  Q  V  R  S  L  A  Y  D  K  Y  L  T  F  *  Q  L  V  W  M  V  V  I  T  Y  C  I  L  F  F  C  L  V  L  I  *  R  L  F  *  L  L  L  *  I  V  F  F  L   </first_frame>
            <second_frame>  F  S  H  S  L  L  L  L  Q  W  L  L  Q  F  L  Y  H  F  L  *  T  L  K  L  N  T  I  T  I  I  V  F  T  I  I  L  A  S  I  H  I  K  L  Q  S  L  P  Q  N  I  H  S  L  L  *  S  H  Q  N  H  T  L  Q  I  *  L  S  H  F  Q  H  P  N  L  L  H  L  L  P  Q  H  L  H  H  Q  S  S  K  P  H  F  K  Q  V  D  F  S  Q  I  K  N  L  K  S  L  N  L  *  G  N  I  G  I  F  K  N  W  N  L  D  H  C  G  F  V  *  *  G  K  K  K  W  M  L  L  F  G  C  W  L  S  L  F  L  I  L  C  *  C  L  K  G  M  *  N  S  W  H  I  *  *  S  S  I  *  L  R  E  E  H  *  C  L  I  L  L  H  F  L  D  S  I  E  K  M  E  K  M  Q  I  C  N  W  L  E  L  W  K  C  V  L  T  K  G  V  L  M  L  I  L  P  H  L  H  L  P  R  T  L  H  T  F  A  I  *  Q  *  I  S  C  L  G   : E  G  A  *  V  G  I  C  *  K  Q  A  R  N  *  F  L  K  *  V  L  L  E  R  F  T  C  T  V  E  *  L  I  L  L  H  S  T  C  I  E  K  L  D  I  P  L  L  R  Q  T  T  F  L  S  C  W  H  C  S  D  G  S  T  *  C  G  K  S  F  Q  I  Q  K  A  F  L  K  L  M  N  A  L  L  Q  *  T  R  E  H  V  N  I  D  K  F  *   : G  G  F  W  S  S  I  C  Q  Y  S  T  G  L  Y  I  P  E  N  N  H  V  E  L  Y  N  M  Q  K  L  Y  A  T  L  *  S  N  M  M  Q  H  R  Q  S  Q  *  R  D  K  H  C  C  S  I  K  K  M  K  D  N  E  E  A  G  N  I  Q  G  F  S  I  S  S  D  L  L  L  L  R  L  F  H  A  D  T  K  P  K  G  M  I  T  V  L  S  I  D  S  D  A  F  L  C  V  Q  *  C  I  T  F  D  K  T  V  N  I  D  G  E  K  D  T  S  F  *  A  V  E  K  L  M  R  R  K  Q  N  N  S  K  T  T  E  *  L  C  I  K  T  E  N  Q  L  K  E  K  E  E  *  K  N  R  Y  R  S  I  L  E  R  G  D  G  *  S  C  M  R  I  L  L  E  Y  V  Q  S  K  *  E  V  *  L  M  T  S  T  *  H  F  N  S  L  F  G  W  L  L  L  P  I  V  F  C  F  S  V  *  F  *  Y  N  V  C  F  N  C  Y  S  E  S  F  F  F  S  </second_frame>
            <third_frame>   S  A  T  P  F  F  F  F  N  G  C  C  N  F  F  I  I  F  F  R  P  S  N  S  T  Q  L  P  S  S  F  S  P  *  Y  *  L  Q  F  T  *  S  F  N  L  Y  P  K  I  Y  I  P  F  C  N  L  I  K  I  T  H  F  K  S  D  Y  P  T  F  N  I  P  I  F  F  I  F  F  L  N  I  S  I  I  S  L  P  N  P  T  S  N  R  *  I  S  H  K  S  R  T  *  K  A  *  I  F  R  E  I  *  V  F  S  R  I  G  I  W  I  I  V  G  S  C  D  E  G  R  R  N  G  C  Y  C  L  V  V  G  *  V  F  F  *  F  Y  V  D  A  *  R  V  C  E  I  H  G  I  F  S  E  A  V  Y  D  *  E  K  S  T  N  A  L  Y  C  Y  T  S  W  I  L  *  R  K  W  R  R  C  R  F  A  I  G  W  N  C  G  S  V  F  *  Q  K  G  C  *  C  *  F  S  H  T  Y  T  S  Q  E  L  S  I  H  L  Q  Y  D  S  R  *  A  A  *  E  :  K  G  H  R  L  A  S  V  E  S  K  R  G  T  N  F  S  N  E  F  F  *  R  G  L  L  A  L  S  N  D  *  Y  C  S  T  Q  H  V  *  K  S  W  I  Y  H  C  *  D  R  Q  H  F  Y  L  V  G  I  A  A  T  E  A  L  D  V  E  S  P  S  R  F  R  K  P  F  *  S  *  *  M  H  F  F  S  R  H  V  N  M  *  T  *  T  S  F  E  :  V  D  S  G  L  R  F  A  N  I  L  Q  V  Y  I  S  L  K  T  I  M  L  N  F  I  T  C  R  S  Y  M  Q  L  C  E  V  I  *  C  S  T  G  N  H  N  S  V  I  N  I  A  A  L  L  R  R  *  R  I  M  K  R  L  E  T  Y  K  D  L  A  Y  P  Q  T  C  F  S  Y  V  C  S  T  L  T  P  N  Q  K  A  *  *  L  F  F  L  L  I  Q  M  L  S  C  V  F  N  D  V  L  H  L  I  R  Q  *  T  L  M  E  K  R  I  Q  V  S  K  L  *  R  N  *  *  E  E  N  K  T  T  R  K  L  L  N  N  Y  A  L  K  Q  K  T  S  *  R  R  K  K  N  E  K  I  D  I  E  V  Y  W  K  E  E  M  D  R  V  V  *  E  S  C  W  S  M  Y  K  A  S  E  K  F  S  L  *  Q  V  L  D  I  L  T  A  C  L  D  G  C  Y  Y  L  L  Y  S  V  F  L  F  S  F  N  I  T  F  V  L  T  V  T  L  N  R  F  F  S  P </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="58282" stop="58979"/>
                    <exon start="59606" stop="59870"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>960</number_coding_nucleotides>
                  <number_encoded_amino_acids>320</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>VQPLPSSSSMAAAISLSFSLDPQTQHNYHHRFHHNTSFNSHKASIFTPKYTFPFVISSKSHTSNLIIPLSTSQSSSSSSSTSPSSVFQTPLQTGRFLTNQELEKLESLGKYRYFQELESGSLWVRVMREEEMDVTVWLLAESFSDSMLMPKGYVKFMAYLVKQYMIERRALMPYTATLLGFYRENGEDADLQLAGTVEVCFDKRGANANSPTPTPPKNSPYICNMTVDKLLRRRGIGWHLLKASEELISQMSSSREVYLHCRMIDTAPLNMYRKAGYTIVETDNIFILLALQRRKHLMWKVLPDSESLSEVDECTSSVDT*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="60305" e_stop="61064"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="0.993"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="0.993">
            <gDNA_exon_boundary e_start="60305" e_stop="61064" e_length="760"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="60305" stop="61064"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U345705" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="12" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>GCAAATATATGTGTACATAGTCAAATCTCTGCACTAACGTGTAATCTTTGATACGTCCTTGTTTTTCTCAGACTCGTCCAGGCTATTATTAAATTATTAAGAAAATTTGAGATCTTTCGGTTGAATCTGGGTTGTGTTCTTTTATTACTTTGACAACTTACTATATCCTACCATTCTCATTGCTCTTTCCAATGTACACTTGAAACTTTTAGCTGATATTTCAACTTCTGAATTTGAAGAATGCTTCTTGGTGCATGTTGATAAGATTTTGTGTCATCCATGTCAATCTGAGAAGGTCTCAGATCATTCTGAACGTATGCATAGTCATGTTTAGCCCTTTCGCATTTGTGTGGAGGATCAGCTGAAGTTCTTTGATGCAGTCTACCATTAAGGGTCTTTCGCTACTGTCGGTTCTCACACAGCGAGATGCTAGGTTAGCAAACATGGTGATAGACTCCATTGTGTATGAGTTCCTGCTAATCTCAGGGTCAATCACCTTACGCAGCTTCTTCTTATCATTCAAAATATGTCTCACCTGCGGTATCATCAAAGAAGTGGATGTCAACTAGTGAAAAGATTTCCAAAGATATTTCATTTTTTGAACACTTCTCCTATATGATGCTTTTTTCGTCATTACCTGTAGTACTAAATTCTGATCACTTGGTCCAAGGGTGAGGTCCACAGCCCTGCGTCCGGTTAAAAGCTCCAACATAACAACACCAAATGCATAAACATCACTTTGTAAAGTGAGTTTTCCAGT</gDNA_template>
            <first_frame> A  N  I  C  V  H  S  Q  I  S  A  L  T  C  N  L  *  Y  V  L  V  F  L  R  L  V  Q  A  I  I  K  L  L  R  K  F  E  I  F  R  L  N  L  G  C  V  L  L  L  L  *  Q  L  T  I  S  Y  H  S  H  C  S  F  Q  C  T  L  E  T  F  S  *  Y  F  N  F  *  I  *  R  M  L  L  G  A  C  *  *  D  F  V  S  S  M  S  I  *  E  G  L  R  S  F  *  T  Y  A  *  S  C  L  A  L  S  H  L  C  G  G  S  A  E  V  L  *  C  S  L  P  L  R  V  F  R  Y  C  R  F  S  H  S  E  M  L  G  *  Q  T  W  *  *  T  P  L  C  M  S  S  C  *  S  Q  G  Q  S  P  Y  A  A  S  S  Y  H  S  K  Y  V  S  P  A  V  S  S  K  K  W  M  S  T  S  E  K  I  S  K  D  I  S  F  F  E  H  F  S  Y  M  M  L  F  S  S  L  P  V  V  L  N  S  D  H  L  V  Q  G  *  G  P  Q  P  C  V  R  L  K  A  P  T  *  Q  H  Q  M  H  K  H  H  F  V  K  *  V  F  Q  </first_frame>
            <second_frame>  Q  I  Y  V  Y  I  V  K  S  L  H  *  R  V  I  F  D  T  S  L  F  F  S  D  S  S  R  L  L  L  N  Y  *  E  N  L  R  S  F  G  *  I  W  V  V  F  F  Y  Y  F  D  N  L  L  Y  P  T  I  L  I  A  L  S  N  V  H  L  K  L  L  A  D  I  S  T  S  E  F  E  E  C  F  L  V  H  V  D  K  I  L  C  H  P  C  Q  S  E  K  V  S  D  H  S  E  R  M  H  S  H  V  *  P  F  R  I  C  V  E  D  Q  L  K  F  F  D  A  V  Y  H  *  G  S  F  A  T  V  G  S  H  T  A  R  C  *  V  S  K  H  G  D  R  L  H  C  V  *  V  P  A  N  L  R  V  N  H  L  T  Q  L  L  L  I  I  Q  N  M  S  H  L  R  Y  H  Q  R  S  G  C  Q  L  V  K  R  F  P  K  I  F  H  F  L  N  T  S  P  I  *  C  F  F  R  H  Y  L  *  Y  *  I  L  I  T  W  S  K  G  E  V  H  S  P  A  S  G  *  K  L  Q  H  N  N  T  K  C  I  N  I  T  L  *  S  E  F  S  S </second_frame>
            <third_frame>   K  Y  M  C  T  *  S  N  L  C  T  N  V  *  S  L  I  R  P  C  F  S  Q  T  R  P  G  Y  Y  *  I  I  K  K  I  *  D  L  S  V  E  S  G  L  C  S  F  I  T  L  T  T  Y  Y  I  L  P  F  S  L  L  F  P  M  Y  T  *  N  F  *  L  I  F  Q  L  L  N  L  K  N  A  S  W  C  M  L  I  R  F  C  V  I  H  V  N  L  R  R  S  Q  I  I  L  N  V  C  I  V  M  F  S  P  F  A  F  V  W  R  I  S  *  S  S  L  M  Q  S  T  I  K  G  L  S  L  L  S  V  L  T  Q  R  D  A  R  L  A  N  M  V  I  D  S  I  V  Y  E  F  L  L  I  S  G  S  I  T  L  R  S  F  F  L  S  F  K  I  C  L  T  C  G  I  I  K  E  V  D  V  N  *  *  K  D  F  Q  R  Y  F  I  F  *  T  L  L  L  Y  D  A  F  F  V  I  T  C  S  T  K  F  *  S  L  G  P  R  V  R  S  T  A  L  R  P  V  K  S  S  N  I  T  T  P  N  A  *  T  S  L  C  K  V  S  F  P   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60429" stop="60638"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>207</number_coding_nucleotides>
                  <number_encoded_amino_acids>69</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>IWVVFFYYFDNLLYPTILIALSNVHLKLLADISTSEFEECFLVHVDKILCHPCQSEKVSDHSERMHSHV*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60670" stop="60873"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>201</number_coding_nucleotides>
                  <number_encoded_amino_acids>67</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SSLMQSTIKGLSLLSVLTQRDARLANMVIDSIVYEFLLISGSITLRSFFLSFKICLTCGIIKEVDVN*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="12" AGS_serial="2" PPS_serial="3"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="60785" stop="60979"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>192</number_coding_nucleotides>
                  <number_encoded_amino_acids>64</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SQGQSPYAASSYHSKYVSPAVSSKKWMSTSEKISKDISFFEHFSYMMLFSSLPVVLNSDHLVQG*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="13" PGL_strand="-" PGL_start="66475" PGL_stop="63236"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="66475" e_stop="66293"/>
            <exon e_start="65905" e_stop="65681"/>
            <exon e_start="65066" e_stop="64747"/>
            <exon e_start="63252" e_stop="63236"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.999" acc_prob="0.980" e_score="1.000"/>
          <exon-intron don_prob="0.993" acc_prob="0.888" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.667" e_score="0.984"/>
          <exon-only e_score="0.706"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="66475" e_stop="66293" e_length="183"/>
          </exon>
          <intron i_serial="1" don_prob="0.999" acc_prob="0.980">
            <gDNA_intron_boundary i_start="66292" i_stop="65906" i_length="387"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="65905" e_stop="65681" e_length="225"/>
          </exon>
          <intron i_serial="2" don_prob="0.993" acc_prob="0.888">
            <gDNA_intron_boundary i_start="65680" i_stop="65067" i_length="614"/>
          </intron>
          <exon e_serial="3" e_score="0.984">
            <gDNA_exon_boundary e_start="65066" e_stop="64747" e_length="320"/>
          </exon>
          <intron i_serial="3" don_prob="0.000" acc_prob="0.667">
            <gDNA_intron_boundary i_start="64746" i_stop="63253" i_length="1494"/>
          </intron>
          <exon e_serial="4" e_score="0.706">
            <gDNA_exon_boundary e_start="63252" e_stop="63236" e_length="17"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="66475" stop="66293"/>
              <exon start="65905" stop="65681"/>
              <exon start="65066" stop="64747"/>
              <exon start="63252" stop="63236"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U316164" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="13" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>AAAAATAGACCAGCAAAAGGCTCTATCTTCTTCCTTCTTCAATTTCTTCATCAATCAAGATTTTCAACAATGGCGCAAACACTAGCAACTCCTGTACTTCCTTCTCTTTCCCTTATCTGCAACACATCTTCCATCTCCAAGCACAGTTCCCTCTCTTTTTCTACTCCCACATCTTTTCCAAAG : ACTGCAGGTTTGGTTATAAAGTGTGTGCGTGTGGGAGGAGTGGAAGTTCCAAACAACAAAAGAGTTGAGTTCTCTTTGCAATACATTCATGGAATTGGCCGCACCACTGCACGCCAGATTCTGGTAGACCTTCAAATGGAGAACAAAGTGATGAAAGACATGTCGGAAGAGGAACTTATCACTCTTCGTGAAGAAGTCTCTAAGTACATGATTGAAGGAGACCTT : AGGAGATTCAATGCTCTTGCCATTAGGAGGTTGAAGGAGATTCAGTGCTATAGAGGAGTAAGGCACATCCAAGGATTGCCTTGCAGAGGACAACGAACAAAGAACAATTGCCGTACTTTGAAGGGCAAGAAAGTAGCAATTGCAGGGAAGAAGAAGGCACCTCGTTAAATCAAGATCGATTTTTCATTTCTTTTGGTAACTAACTTGTAAAAGTTACACTCTATATTCCTATGGCAAACTGTGCATTTGTTTGTTATAAACAGTTTTTTCCATTGAAATCATTTTTCTACATTTCAAGATAAGAGCTTTTCAAGAAGAAT : AAAAACAGAATACAATA</gDNA_template>
            <first_frame> K  N  R  P  A  K  G  S  I  F  F  L  L  Q  F  L  H  Q  S  R  F  S  T  M  A  Q  T  L  A  T  P  V  L  P  S  L  S  L  I  C  N  T  S  S  I  S  K  H  S  S  L  S  F  S  T  P  T  S  F  P  K  :  T  A  G  L  V  I  K  C  V  R  V  G  G  V  E  V  P  N  N  K  R  V  E  F  S  L  Q  Y  I  H  G  I  G  R  T  T  A  R  Q  I  L  V  D  L  Q  M  E  N  K  V  M  K  D  M  S  E  E  E  L  I  T  L  R  E  E  V  S  K  Y  M  I  E  G  D  L  :  R  R  F  N  A  L  A  I  R  R  L  K  E  I  Q  C  Y  R  G  V  R  H  I  Q  G  L  P  C  R  G  Q  R  T  K  N  N  C  R  T  L  K  G  K  K  V  A  I  A  G  K  K  K  A  P  R  *  I  K  I  D  F  S  F  L  L  V  T  N  L  *  K  L  H  S  I  F  L  W  Q  T  V  H  L  F  V  I  N  S  F  F  H  *  N  H  F  S  T  F  Q  D  K  S  F  S  R  R  I :   K  T  E  Y  N  </first_frame>
            <second_frame>  K  I  D  Q  Q  K  A  L  S  S  S  F  F  N  F  F  I  N  Q  D  F  Q  Q  W  R  K  H  *  Q  L  L  Y  F  L  L  F  P  L  S  A  T  H  L  P  S  P  S  T  V  P  S  L  F  L  L  P  H  L  F  Q  R :   L  Q  V  W  L  *  S  V  C  V  W  E  E  W  K  F  Q  T  T  K  E  L  S  S  L  C  N  T  F  M  E  L  A  A  P  L  H  A  R  F  W  *  T  F  K  W  R  T  K  *  *  K  T  C  R  K  R  N  L  S  L  F  V  K  K  S  L  S  T  *  L  K  E  T  L :   G  D  S  M  L  L  P  L  G  G  *  R  R  F  S  A  I  E  E  *  G  T  S  K  D  C  L  A  E  D  N  E  Q  R  T  I  A  V  L  *  R  A  R  K  *  Q  L  Q  G  R  R  R  H  L  V  K  S  R  S  I  F  H  F  F  W  *  L  T  C  K  S  Y  T  L  Y  S  Y  G  K  L  C  I  C  L  L  *  T  V  F  S  I  E  I  I  F  L  H  F  K  I  R  A  F  Q  E  E   : *  K  Q  N  T  I </second_frame>
            <third_frame>   K  *  T  S  K  R  L  Y  L  L  P  S  S  I  S  S  S  I  K  I  F  N  N  G  A  N  T  S  N  S  C  T  S  F  S  F  P  Y  L  Q  H  I  F  H  L  Q  A  Q  F  P  L  F  F  Y  S  H  I  F  S  K   : D  C  R  F  G  Y  K  V  C  A  C  G  R  S  G  S  S  K  Q  Q  K  S  *  V  L  F  A  I  H  S  W  N  W  P  H  H  C  T  P  D  S  G  R  P  S  N  G  E  Q  S  D  E  R  H  V  G  R  G  T  Y  H  S  S  *  R  S  L  *  V  H  D  *  R  R  P   : *  E  I  Q  C  S  C  H  *  E  V  E  G  D  S  V  L  *  R  S  K  A  H  P  R  I  A  L  Q  R  T  T  N  K  E  Q  L  P  Y  F  E  G  Q  E  S  S  N  C  R  E  E  E  G  T  S  L  N  Q  D  R  F  F  I  S  F  G  N  *  L  V  K  V  T  L  Y  I  P  M  A  N  C  A  F  V  C  Y  K  Q  F  F  P  L  K  S  F  F  Y  I  S  R  *  E  L  F  K  K  N  :  K  N  R  I  Q   </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="-"/>
                <serials PGL_serial="13" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="66475" stop="66293"/>
                    <exon start="65905" stop="65681"/>
                    <exon start="65066" stop="64899"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>573</number_coding_nucleotides>
                  <number_encoded_amino_acids>191</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>KNRPAKGSIFFLLQFLHQSRFSTMAQTLATPVLPSLSLICNTSSISKHSSLSFSTPTSFPKTAGLVIKCVRVGGVEVPNNKRVEFSLQYIHGIGRTTARQILVDLQMENKVMKDMSEEELITLREEVSKYMIEGDLRRFNALAIRRLKEIQCYRGVRHIQGLPCRGQRTKNNCRTLKGKKVAIAGKKKAPR*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="14" PGL_strand="+" PGL_start="68421" PGL_stop="69721"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="68421" e_stop="68638"/>
            <exon e_start="69271" e_stop="69721"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.996" acc_prob="1.000" e_score="1.000"/>
          <exon-only e_score="0.978"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68421" e_stop="68638" e_length="218"/>
          </exon>
          <intron i_serial="1" don_prob="0.996" acc_prob="1.000">
            <gDNA_intron_boundary i_start="68639" i_stop="69270" i_length="632"/>
          </intron>
          <exon e_serial="2" e_score="0.978">
            <gDNA_exon_boundary e_start="69271" e_stop="69721" e_length="451"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68421" stop="68638"/>
              <exon start="69271" stop="69471"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U336783" strand="+"/>
          </PGS_line>
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68434" stop="68638"/>
              <exon start="69271" stop="69721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319298" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="1" gDNA_strand="+"/>
          <translation>
            <gDNA_template>AATATTGTAATCTCTCAATTTAAAAAAAATGTCATCCAATTTAGGAAAAATTGATGTTGAAGTTGAGGTGAAAAGTCCAGTTGACAAATTTTGGAATGGCATTAGGGACTCAATAAATTTGTTCCCCAAGGCTTCACCTAATGAATACAAGAGCATTGAAGTTGTTGAAGGTGATGGCAAGTCTGTTGGTTCTGTTCTATTGATCAAATATACTGAAG : GGTTTCCATTGGTGACATTCTCAAAAGAGAAAATAGAGTCAATTGATGAGGCAAATAAAACATTGGTTTATTCAGTTATTGATGGTGAAACCTTGAAATACTACAAGAGTTTCAAAGGCACCCTAACTGTGATTCCAAAGGGAAATGGAAGTTTGGTTAAGTGGTGTTGTGAATTTGAAAGGGCAAATGATGAAATTCCTGAGCCACAAATCATTAAAGAATTTGCTGTCAAGAATTTCAAGAATCTTGATGCTTATCTCATTGGGGCATAAAAAGACCTTATGACATATATGCTATGTGATAGAAATTAATAATCTTCACATAGTATATAGTTTTTAATGAATAAAATTACGTGCAGGTATGTGAGTAGCTACTTTACTTTTCTAGTCATGTAAGTGTAATAAAAACTTGAATAAATAAAACTATAATGGGGTTAAGACCTTATTACTAT</gDNA_template>
            <first_frame> N  I  V  I  S  Q  F  K  K  N  V  I  Q  F  R  K  N  *  C  *  S  *  G  E  K  S  S  *  Q  I  L  E  W  H  *  G  L  N  K  F  V  P  Q  G  F  T  *  *  I  Q  E  H  *  S  C  *  R  *  W  Q  V  C  W  F  C  S  I  D  Q  I  Y  *  R :   V  S  I  G  D  I  L  K  R  E  N  R  V  N  *  *  G  K  *  N  I  G  L  F  S  Y  *  W  *  N  L  E  I  L  Q  E  F  Q  R  H  P  N  C  D  S  K  G  K  W  K  F  G  *  V  V  L  *  I  *  K  G  K  *  *  N  S  *  A  T  N  H  *  R  I  C  C  Q  E  F  Q  E  S  *  C  L  S  H  W  G  I  K  R  P  Y  D  I  Y  A  M  *  *  K  L  I  I  F  T  *  Y  I  V  F  N  E  *  N  Y  V  Q  V  C  E  *  L  L  Y  F  S  S  H  V  S  V  I  K  T  *  I  N  K  T  I  M  G  L  R  P  Y  Y  Y </first_frame>
            <second_frame>  I  L  *  S  L  N  L  K  K  M  S  S  N  L  G  K  I  D  V  E  V  E  V  K  S  P  V  D  K  F  W  N  G  I  R  D  S  I  N  L  F  P  K  A  S  P  N  E  Y  K  S  I  E  V  V  E  G  D  G  K  S  V  G  S  V  L  L  I  K  Y  T  E   : G  F  P  L  V  T  F  S  K  E  K  I  E  S  I  D  E  A  N  K  T  L  V  Y  S  V  I  D  G  E  T  L  K  Y  Y  K  S  F  K  G  T  L  T  V  I  P  K  G  N  G  S  L  V  K  W  C  C  E  F  E  R  A  N  D  E  I  P  E  P  Q  I  I  K  E  F  A  V  K  N  F  K  N  L  D  A  Y  L  I  G  A  *  K  D  L  M  T  Y  M  L  C  D  R  N  *  *  S  S  H  S  I  *  F  L  M  N  K  I  T  C  R  Y  V  S  S  Y  F  T  F  L  V  M  *  V  *  *  K  L  E  *  I  K  L  *  W  G  *  D  L  I  T   </second_frame>
            <third_frame>   Y  C  N  L  S  I  *  K  K  C  H  P  I  *  E  K  L  M  L  K  L  R  *  K  V  Q  L  T  N  F  G  M  A  L  G  T  Q  *  I  C  S  P  R  L  H  L  M  N  T  R  A  L  K  L  L  K  V  M  A  S  L  L  V  L  F  Y  *  S  N  I  L  K  :  G  F  H  W  *  H  S  Q  K  R  K  *  S  Q  L  M  R  Q  I  K  H  W  F  I  Q  L  L  M  V  K  P  *  N  T  T  R  V  S  K  A  P  *  L  *  F  Q  R  E  M  E  V  W  L  S  G  V  V  N  L  K  G  Q  M  M  K  F  L  S  H  K  S  L  K  N  L  L  S  R  I  S  R  I  L  M  L  I  S  L  G  H  K  K  T  L  *  H  I  C  Y  V  I  E  I  N  N  L  H  I  V  Y  S  F  *  *  I  K  L  R  A  G  M  *  V  A  T  L  L  F  *  S  C  K  C  N  K  N  L  N  K  *  N  Y  N  G  V  K  T  L  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68431" stop="68638"/>
                    <exon start="69271" stop="69542"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>477</number_coding_nucleotides>
                  <number_encoded_amino_acids>159</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>SLNLKKMSSNLGKIDVEVEVKSPVDKFWNGIRDSINLFPKASPNEYKSIEVVEGDGKSVGSVLLIKYTEGFPLVTFSKEKIESIDEANKTLVYSVIDGETLKYYKSFKGTLTVIPKGNGSLVKWCCEFERANDEIPEPQIIKEFAVKNFKNLDAYLIGA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
      <AGS_information>
        <AGS_line AGS_serial="2">
          <exon_coordinates>
            <exon e_start="68435" e_stop="69721"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-only e_score="1.000"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="68435" e_stop="69721" e_length="1287"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="68435" stop="69721"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U319297" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="14" AGS_serial="2" gDNA_strand="+"/>
          <translation>
            <gDNA_template>TCAATTTAAAAAAAATGTCATCCAATTTAGGAAAAATTGATGTTGAAGTTGAGGTGAAAAGTCCAGTTGACAAATTTTGGAATGGCATTAGGGACTCAATAAATTTGTTCCCCAAGGCTTCACCTAATGAATACAAGAGCATTGAAGTTGTTGAAGGTGATGGCAAGTCTGTTGGTTCTGTTCTATTGATCAAATATACTGAAGGTAATGTTCATGCATTGTTTCCTCATGTTTTAATTAATTTACGTGTCGTAACAGATAACTTATTTATTTTACAGATTTCAAATTCTCATTTTTTATGGATGGTTTGTCGGTTACTTGATCACTATACTACAAAAAAAATGGTCATTAGCAATAAAAACTAATCCAAAAAAACGTATTTTCTAATTTAATATCAAAAGACTTAAATTTTCTATATCTAAATTCACTATTAAATATTAGAAGTAACGAATCTCAAAATTCTGACTATGCCACATAGATTATAAAAGTTTAGAAGTACAAATCTCAAAATTCTTTGAATTCAGACTGTGCCACGTAATCTGAATTCACATAGTGACATGTTAAGTATATATAGTGTGACAAACCTGGATTGTAGTGCACTGGTGGAAGTGTTTCACTGTTAACCAGAGGTCTCATGTTCGAGCCCTGTGGATGAAGAAAATCTTGTTGGGAGTGTCACACCCGAACGGACTCTGCAGTGAGCGATCCAGAATTAGTCGGAGCTCCAATTCGGCCTCCGAACATCGATTGGAAAACCAAAAAAAAGTATATATACTCTGTTCTTTTGTTCTATTTTTCATTTTATTTTATAATTTCATTGTTTTTTTTTCATACAGGGTTTCCATTGGTGACATTCTCAAAAGAGAAAATAGAGTCAATTGATGAGGCAAATAAAACATTGGTTTATTCAGTTATTGATGGTGAAACCTTGAAATACTACAAGAGTTTCAAAGGCACCCTAACTGTGATTCCAAAGGGAAATGGAAGTTTGGTTAAGTGGTGTTGTGAATTTGAAAGGGCAAATGATGAAATTCCTGAGCCACAAATCATTAAAGAATTTGCTGTCAAGAATTTCAAGAATCTTGATGCTTATCTCATTGGGGCATAAAAAGACCTTATGACATATATGCTATGTGATAGAAATTAATAATCTTCACATAGTATATAGTTTTTAATGAATAAAATTACGTGCAGGTATGTGAGTAGCTACTTTACTTTTCTAGTCATGTAAGTGTAATAAAAACTTGAATAAATAAAACTATAATGGGGTTAAGACCTTATTACTAT</gDNA_template>
            <first_frame> S  I  *  K  K  C  H  P  I  *  E  K  L  M  L  K  L  R  *  K  V  Q  L  T  N  F  G  M  A  L  G  T  Q  *  I  C  S  P  R  L  H  L  M  N  T  R  A  L  K  L  L  K  V  M  A  S  L  L  V  L  F  Y  *  S  N  I  L  K  V  M  F  M  H  C  F  L  M  F  *  L  I  Y  V  S  *  Q  I  T  Y  L  F  Y  R  F  Q  I  L  I  F  Y  G  W  F  V  G  Y  L  I  T  I  L  Q  K  K  W  S  L  A  I  K  T  N  P  K  K  R  I  F  *  F  N  I  K  R  L  K  F  S  I  S  K  F  T  I  K  Y  *  K  *  R  I  S  K  F  *  L  C  H  I  D  Y  K  S  L  E  V  Q  I  S  K  F  F  E  F  R  L  C  H  V  I  *  I  H  I  V  T  C  *  V  Y  I  V  *  Q  T  W  I  V  V  H  W  W  K  C  F  T  V  N  Q  R  S  H  V  R  A  L  W  M  K  K  I  L  L  G  V  S  H  P  N  G  L  C  S  E  R  S  R  I  S  R  S  S  N  S  A  S  E  H  R  L  E  N  Q  K  K  V  Y  I  L  C  S  F  V  L  F  F  I  L  F  Y  N  F  I  V  F  F  S  Y  R  V  S  I  G  D  I  L  K  R  E  N  R  V  N  *  *  G  K  *  N  I  G  L  F  S  Y  *  W  *  N  L  E  I  L  Q  E  F  Q  R  H  P  N  C  D  S  K  G  K  W  K  F  G  *  V  V  L  *  I  *  K  G  K  *  *  N  S  *  A  T  N  H  *  R  I  C  C  Q  E  F  Q  E  S  *  C  L  S  H  W  G  I  K  R  P  Y  D  I  Y  A  M  *  *  K  L  I  I  F  T  *  Y  I  V  F  N  E  *  N  Y  V  Q  V  C  E  *  L  L  Y  F  S  S  H  V  S  V  I  K  T  *  I  N  K  T  I  M  G  L  R  P  Y  Y  Y </first_frame>
            <second_frame>  Q  F  K  K  N  V  I  Q  F  R  K  N  *  C  *  S  *  G  E  K  S  S  *  Q  I  L  E  W  H  *  G  L  N  K  F  V  P  Q  G  F  T  *  *  I  Q  E  H  *  S  C  *  R  *  W  Q  V  C  W  F  C  S  I  D  Q  I  Y  *  R  *  C  S  C  I  V  S  S  C  F  N  *  F  T  C  R  N  R  *  L  I  Y  F  T  D  F  K  F  S  F  F  M  D  G  L  S  V  T  *  S  L  Y  Y  K  K  N  G  H  *  Q  *  K  L  I  Q  K  N  V  F  S  N  L  I  S  K  D  L  N  F  L  Y  L  N  S  L  L  N  I  R  S  N  E  S  Q  N  S  D  Y  A  T  *  I  I  K  V  *  K  Y  K  S  Q  N  S  L  N  S  D  C  A  T  *  S  E  F  T  *  *  H  V  K  Y  I  *  C  D  K  P  G  L  *  C  T  G  G  S  V  S  L  L  T  R  G  L  M  F  E  P  C  G  *  R  K  S  C  W  E  C  H  T  R  T  D  S  A  V  S  D  P  E  L  V  G  A  P  I  R  P  P  N  I  D  W  K  T  K  K  K  Y  I  Y  S  V  L  L  F  Y  F  S  F  Y  F  I  I  S  L  F  F  F  H  T  G  F  P  L  V  T  F  S  K  E  K  I  E  S  I  D  E  A  N  K  T  L  V  Y  S  V  I  D  G  E  T  L  K  Y  Y  K  S  F  K  G  T  L  T  V  I  P  K  G  N  G  S  L  V  K  W  C  C  E  F  E  R  A  N  D  E  I  P  E  P  Q  I  I  K  E  F  A  V  K  N  F  K  N  L  D  A  Y  L  I  G  A  *  K  D  L  M  T  Y  M  L  C  D  R  N  *  *  S  S  H  S  I  *  F  L  M  N  K  I  T  C  R  Y  V  S  S  Y  F  T  F  L  V  M  *  V  *  *  K  L  E  *  I  K  L  *  W  G  *  D  L  I  T   </second_frame>
            <third_frame>   N  L  K  K  M  S  S  N  L  G  K  I  D  V  E  V  E  V  K  S  P  V  D  K  F  W  N  G  I  R  D  S  I  N  L  F  P  K  A  S  P  N  E  Y  K  S  I  E  V  V  E  G  D  G  K  S  V  G  S  V  L  L  I  K  Y  T  E  G  N  V  H  A  L  F  P  H  V  L  I  N  L  R  V  V  T  D  N  L  F  I  L  Q  I  S  N  S  H  F  L  W  M  V  C  R  L  L  D  H  Y  T  T  K  K  M  V  I  S  N  K  N  *  S  K  K  T  Y  F  L  I  *  Y  Q  K  T  *  I  F  Y  I  *  I  H  Y  *  I  L  E  V  T  N  L  K  I  L  T  M  P  H  R  L  *  K  F  R  S  T  N  L  K  I  L  *  I  Q  T  V  P  R  N  L  N  S  H  S  D  M  L  S  I  Y  S  V  T  N  L  D  C  S  A  L  V  E  V  F  H  C  *  P  E  V  S  C  S  S  P  V  D  E  E  N  L  V  G  S  V  T  P  E  R  T  L  Q  *  A  I  Q  N  *  S  E  L  Q  F  G  L  R  T  S  I  G  K  P  K  K  S  I  Y  T  L  F  F  C  S  I  F  H  F  I  L  *  F  H  C  F  F  F  I  Q  G  F  H  W  *  H  S  Q  K  R  K  *  S  Q  L  M  R  Q  I  K  H  W  F  I  Q  L  L  M  V  K  P  *  N  T  T  R  V  S  K  A  P  *  L  *  F  Q  R  E  M  E  V  W  L  S  G  V  V  N  L  K  G  Q  M  M  K  F  L  S  H  K  S  L  K  N  L  L  S  R  I  S  R  I  L  M  L  I  S  L  G  H  K  K  T  L  *  H  I  C  Y  V  I  E  I  N  N  L  H  I  V  Y  S  F  *  *  I  K  L  R  A  G  M  *  V  A  T  L  L  F  *  S  C  K  C  N  K  N  L  N  K  *  N  Y  N  G  V  K  T  L  L  L  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="69090" stop="69542"/>
                  </exon_boundaries>
                  <frame>1</frame>
                  <number_coding_nucleotides>450</number_coding_nucleotides>
                  <number_encoded_amino_acids>150</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>RKSCWECHTRTDSAVSDPELVGAPIRPPNIDWKTKKKYIYSVLLFYFSFYFIISLFFFHTGFPLVTFSKEKIESIDEANKTLVYSVIDGETLKYYKSFKGTLTVIPKGNGSLVKWCCEFERANDEIPEPQIIKEFAVKNFKNLDAYLIGA*</predicted_protein_sequence>
            </orf_entry>
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="+"/>
                <serials PGL_serial="14" AGS_serial="2" PPS_serial="2"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="68437" stop="68799"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>360</number_coding_nucleotides>
                  <number_encoded_amino_acids>120</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>NLKKMSSNLGKIDVEVEVKSPVDKFWNGIRDSINLFPKASPNEYKSIEVVEGDGKSVGSVLLIKYTEGNVHALFPHVLINLRVVTDNLFILQISNSHFLWMVCRLLDHYTTKKMVISNKN*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="15" PGL_strand="-" PGL_start="71540" PGL_stop="70495"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="71540" e_stop="71443"/>
            <exon e_start="71319" e_stop="71168"/>
            <exon e_start="70999" e_stop="70495"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.952" acc_prob="0.913" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.649" e_score="1.000"/>
          <exon-only e_score="0.980"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="71540" e_stop="71443" e_length="98"/>
          </exon>
          <intron i_serial="1" don_prob="0.952" acc_prob="0.913">
            <gDNA_intron_boundary i_start="71442" i_stop="71320" i_length="123"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="71319" e_stop="71168" e_length="152"/>
          </exon>
          <intron i_serial="2" don_prob="0.000" acc_prob="0.649">
            <gDNA_intron_boundary i_start="71167" i_stop="71000" i_length="168"/>
          </intron>
          <exon e_serial="3" e_score="0.980">
            <gDNA_exon_boundary e_start="70999" e_stop="70495" e_length="505"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="71540" stop="71443"/>
              <exon start="71319" stop="71168"/>
              <exon start="70999" stop="70495"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U340173" strand="-"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="15" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GAACTATACAATCAGCAATATTTGCTTTGGTTATGGAAAAAGATCTAAATGCTTGGAAACTTGAGCTTAACATGGAGCTTCTTGTTATAGTTTTAACG : GCAATTTTTGGGAGTTTAATACGTAGCAATGTTCAAATGTGGTGCATGCGTTTGAAAGGATCTTCTTTTCCTCTATTTTTCAAGCCAGTGGGAATTCCAACAGCTAGTGCTTGTGGATGTTTACTTTTTGCTGATACTTTTCACTATGGAAG : TATGTTGAGTGCAATTATATGTGGAATGGGTTATTTCACTACACTATGGGGACAACTCAAAGATGATGAAACAAGTAAAAACATTAAGGGTAGGATATTACCAACAACTAGTGATGAGAAAGTTCCACTTTTGGAAGAAAGAGGAGAAGACGGAGACGAAGAAGTCGAAGGAGATTCAAAAGTCTAATAAAAGATGGAAATTTAATAAGATGATGAAGATAAATGTTAAGTGTTTGCTAGGAATTTTAATATTTGTTGTATATATGTGTTGGAGGGAAGTATTTTTTTCAAACCTTCCAATGCAAGTTGAACAATGAAATTGTTGTTCAACATTATATTGATTGTTTCTCTAGGTAGCTATAGAGGTTACGTACGCTCTTGTTGATATGTGTGATTGAGAAATTTGGTGTATGTTGATTAATTTCATCCCATTTGTAAATAGTGTGCATTGATTTTGATGAGATATCGATAATACGAGTTTGTGATGGTATATATAAGATTGCGT</gDNA_template>
            <first_frame> E  L  Y  N  Q  Q  Y  L  L  W  L  W  K  K  I  *  M  L  G  N  L  S  L  T  W  S  F  L  L  *  F  *  R :   Q  F  L  G  V  *  Y  V  A  M  F  K  C  G  A  C  V  *  K  D  L  L  F  L  Y  F  S  S  Q  W  E  F  Q  Q  L  V  L  V  D  V  Y  F  L  L  I  L  F  T  M  E   : V  C  *  V  Q  L  Y  V  E  W  V  I  S  L  H  Y  G  D  N  S  K  M  M  K  Q  V  K  T  L  R  V  G  Y  Y  Q  Q  L  V  M  R  K  F  H  F  W  K  K  E  E  K  T  E  T  K  K  S  K  E  I  Q  K  S  N  K  R  W  K  F  N  K  M  M  K  I  N  V  K  C  L  L  G  I  L  I  F  V  V  Y  M  C  W  R  E  V  F  F  S  N  L  P  M  Q  V  E  Q  *  N  C  C  S  T  L  Y  *  L  F  L  *  V  A  I  E  V  T  Y  A  L  V  D  M  C  D  *  E  I  W  C  M  L  I  N  F  I  P  F  V  N  S  V  H  *  F  *  *  D  I  D  N  T  S  L  *  W  Y  I  *  D  C   </first_frame>
            <second_frame>  N  Y  T  I  S  N  I  C  F  G  Y  G  K  R  S  K  C  L  E  T  *  A  *  H  G  A  S  C  Y  S  F  N   : G  N  F  W  E  F  N  T  *  Q  C  S  N  V  V  H  A  F  E  R  I  F  F  S  S  I  F  Q  A  S  G  N  S  N  S  *  C  L  W  M  F  T  F  C  *  Y  F  S  L  W  K  :  Y  V  E  C  N  Y  M  W  N  G  L  F  H  Y  T  M  G  T  T  Q  R  *  *  N  K  *  K  H  *  G  *  D  I  T  N  N  *  *  *  E  S  S  T  F  G  R  K  R  R  R  R  R  R  R  S  R  R  R  F  K  S  L  I  K  D  G  N  L  I  R  *  *  R  *  M  L  S  V  C  *  E  F  *  Y  L  L  Y  I  C  V  G  G  K  Y  F  F  Q  T  F  Q  C  K  L  N  N  E  I  V  V  Q  H  Y  I  D  C  F  S  R  *  L  *  R  L  R  T  L  L  L  I  C  V  I  E  K  F  G  V  C  *  L  I  S  S  H  L  *  I  V  C  I  D  F  D  E  I  S  I  I  R  V  C  D  G  I  Y  K  I  A  </second_frame>
            <third_frame>   T  I  Q  S  A  I  F  A  L  V  M  E  K  D  L  N  A  W  K  L  E  L  N  M  E  L  L  V  I  V  L  T  :  A  I  F  G  S  L  I  R  S  N  V  Q  M  W  C  M  R  L  K  G  S  S  F  P  L  F  F  K  P  V  G  I  P  T  A  S  A  C  G  C  L  L  F  A  D  T  F  H  Y  G  S :   M  L  S  A  I  I  C  G  M  G  Y  F  T  T  L  W  G  Q  L  K  D  D  E  T  S  K  N  I  K  G  R  I  L  P  T  T  S  D  E  K  V  P  L  L  E  E  R  G  E  D  G  D  E  E  V  E  G  D  S  K  V  *  *  K  M  E  I  *  *  D  D  E  D  K  C  *  V  F  A  R  N  F  N  I  C  C  I  Y  V  L  E  G  S  I  F  F  K  P  S  N  A  S  *  T  M  K  L  L  F  N  I  I  L  I  V  S  L  G  S  Y  R  G  Y  V  R  S  C  *  Y  V  *  L  R  N  L  V  Y  V  D  *  F  H  P  I  C  K  *  C  A  L  I  L  M  R  Y  R  *  Y  E  F  V  M  V  Y  I  R  L  R </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="-"/>
                <serials PGL_serial="15" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="71538" stop="71443"/>
                    <exon start="71319" stop="71168"/>
                    <exon start="70999" stop="70813"/>
                  </exon_boundaries>
                  <frame>2</frame>
                  <number_coding_nucleotides>432</number_coding_nucleotides>
                  <number_encoded_amino_acids>144</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>TIQSAIFALVMEKDLNAWKLELNMELLVIVLTAIFGSLIRSNVQMWCMRLKGSSFPLFFKPVGIPTASACGCLLFADTFHYGSMLSAIICGMGYFTTLWGQLKDDETSKNIKGRILPTTSDEKVPLLEERGEDGDEEVEGDSKV*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
    <predicted_gene_location>
      <PGL_line PGL_serial="16" PGL_strand="-" PGL_start="90687" PGL_stop="88464"/>
      <AGS_information>
        <AGS_line AGS_serial="1">
          <exon_coordinates>
            <exon e_start="90687" e_stop="90544"/>
            <exon e_start="90352" e_stop="90194"/>
            <exon e_start="89907" e_stop="89756"/>
            <exon e_start="89210" e_stop="88877"/>
            <exon e_start="88514" e_stop="88464"/>
          </exon_coordinates>
        </AGS_line>
        <SCR_line>
          <exon-intron don_prob="0.499" acc_prob="0.991" e_score="1.000"/>
          <exon-intron don_prob="0.997" acc_prob="0.828" e_score="1.000"/>
          <exon-intron don_prob="0.992" acc_prob="0.990" e_score="1.000"/>
          <exon-intron don_prob="0.000" acc_prob="0.000" e_score="1.000"/>
          <exon-only e_score="0.667"/>
        </SCR_line>
        <exon-intron_info xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/exon-intron_info/">
          <exon e_serial="1" e_score="1.000">
            <gDNA_exon_boundary e_start="90687" e_stop="90544" e_length="144"/>
          </exon>
          <intron i_serial="1" don_prob="0.499" acc_prob="0.991">
            <gDNA_intron_boundary i_start="90543" i_stop="90353" i_length="191"/>
          </intron>
          <exon e_serial="2" e_score="1.000">
            <gDNA_exon_boundary e_start="90352" e_stop="90194" e_length="159"/>
          </exon>
          <intron i_serial="2" don_prob="0.997" acc_prob="0.828">
            <gDNA_intron_boundary i_start="90193" i_stop="89908" i_length="286"/>
          </intron>
          <exon e_serial="3" e_score="1.000">
            <gDNA_exon_boundary e_start="89907" e_stop="89756" e_length="152"/>
          </exon>
          <intron i_serial="3" don_prob="0.992" acc_prob="0.990">
            <gDNA_intron_boundary i_start="89755" i_stop="89211" i_length="545"/>
          </intron>
          <exon e_serial="4" e_score="1.000">
            <gDNA_exon_boundary e_start="89210" e_stop="88877" e_length="334"/>
          </exon>
          <intron i_serial="4" don_prob="0.000" acc_prob="0.000">
            <gDNA_intron_boundary i_start="88876" i_stop="88515" i_length="362"/>
          </intron>
          <exon e_serial="5" e_score="0.667">
            <gDNA_exon_boundary e_start="88514" e_stop="88464" e_length="51"/>
          </exon>
        </exon-intron_info>
        <supporting_evidence xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/supporting_evidence/">
          <PGS_line>
            <gDNA_exon_coordinates>
              <exon start="90687" stop="90544"/>
              <exon start="90352" stop="90194"/>
              <exon start="89907" stop="89756"/>
              <exon start="89210" stop="88877"/>
              <exon start="88514" stop="88464"/>
            </gDNA_exon_coordinates>
            <referenceDNA id="SGN-U326441" strand="+"/>
          </PGS_line>
        </supporting_evidence>
        <three_phase_translation xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/">
          <description PGL_serial="16" AGS_serial="1" gDNA_strand="-"/>
          <translation>
            <gDNA_template>GCATTTGTTTTGACATTTTATAAGGGCCCTCCAATCATTAACCAACACTTAACTTCTACTTTCTCATCTCAACAAAATTGGATCCTTGGAGGAGTTATACTTGCTTGTGAGTCTATGTCCACTTCACTATGGTACATTATTCAG : GCTTCAATTCTTAAGATATACCAAGAAGAGATGGTGATAGTGTGTTTGTATTGCTTCTTTGTGACCATCATATCTACATTAATATCCCTAGTGGTGGAGAGAAATACAAATGCTTGGATCATATATCTAGACATTCGTCTCATTGCTATTCTCTACTCG : GGTATAATTGGTATAGCATTTAGGAGTTGTATGACAACATGGTGCCTCAAGAAGACAGATCCTCTCTTTGTTTCAATGTTTAAGCCCTTTGCCATTGTTTTTGCTATCCTCATTGGTACCTTTTGCTTTAGAGATGCTTTCTACTTAGGAAG : TTTGGTGGGATCAGTGACCACAGTGATTGGGTTTTATGCTGTGATGTGGGGAAAAACTCAAGAAAAATACTATGAGGGGAACAACTTAGAAACACTTGCTGAAAATAATGTCCCTCTGCTGCAAAATGAGGCATAAATACGGTGTTTGAGTCAGCTCGTGTGCGCCTCAATTAATTTTATGTGATATTTATTATCTTTCATTAAACAACACAAATACTGAATCAATTCATTTCGAGGAAAGAAATAATTGTATGTTAGTTGTAAAGATAGTGTTTTAAATTTATACTCATGTATTATATCGATAAAAATAAATATATAAAAATCATTTAACCAA : GTTAGAAATAAGTAAAATAAAGAAACTAATCATAATAAAATTTAAAATATA</gDNA_template>
            <first_frame> A  F  V  L  T  F  Y  K  G  P  P  I  I  N  Q  H  L  T  S  T  F  S  S  Q  Q  N  W  I  L  G  G  V  I  L  A  C  E  S  M  S  T  S  L  W  Y  I  I  Q  :  A  S  I  L  K  I  Y  Q  E  E  M  V  I  V  C  L  Y  C  F  F  V  T  I  I  S  T  L  I  S  L  V  V  E  R  N  T  N  A  W  I  I  Y  L  D  I  R  L  I  A  I  L  Y  S  :  G  I  I  G  I  A  F  R  S  C  M  T  T  W  C  L  K  K  T  D  P  L  F  V  S  M  F  K  P  F  A  I  V  F  A  I  L  I  G  T  F  C  F  R  D  A  F  Y  L  G  S :   L  V  G  S  V  T  T  V  I  G  F  Y  A  V  M  W  G  K  T  Q  E  K  Y  Y  E  G  N  N  L  E  T  L  A  E  N  N  V  P  L  L  Q  N  E  A  *  I  R  C  L  S  Q  L  V  C  A  S  I  N  F  M  *  Y  L  L  S  F  I  K  Q  H  K  Y  *  I  N  S  F  R  G  K  K  *  L  Y  V  S  C  K  D  S  V  L  N  L  Y  S  C  I  I  S  I  K  I  N  I  *  K  S  F  N  Q  :  V  R  N  K  *  N  K  E  T  N  H  N  K  I  *  N  I </first_frame>
            <second_frame>  H  L  F  *  H  F  I  R  A  L  Q  S  L  T  N  T  *  L  L  L  S  H  L  N  K  I  G  S  L  E  E  L  Y  L  L  V  S  L  C  P  L  H  Y  G  T  L  F  R :   L  Q  F  L  R  Y  T  K  K  R  W  *  *  C  V  C  I  A  S  L  *  P  S  Y  L  H  *  Y  P  *  W  W  R  E  I  Q  M  L  G  S  Y  I  *  T  F  V  S  L  L  F  S  T  R :   V  *  L  V  *  H  L  G  V  V  *  Q  H  G  A  S  R  R  Q  I  L  S  L  F  Q  C  L  S  P  L  P  L  F  L  L  S  S  L  V  P  F  A  L  E  M  L  S  T  *  E   : V  W  W  D  Q  *  P  Q  *  L  G  F  M  L  *  C  G  E  K  L  K  K  N  T  M  R  G  T  T  *  K  H  L  L  K  I  M  S  L  C  C  K  M  R  H  K  Y  G  V  *  V  S  S  C  A  P  Q  L  I  L  C  D  I  Y  Y  L  S  L  N  N  T  N  T  E  S  I  H  F  E  E  R  N  N  C  M  L  V  V  K  I  V  F  *  I  Y  T  H  V  L  Y  R  *  K  *  I  Y  K  N  H  L  T  K :   L  E  I  S  K  I  K  K  L  I  I  I  K  F  K  I   </second_frame>
            <third_frame>   I  C  F  D  I  L  *  G  P  S  N  H  *  P  T  L  N  F  Y  F  L  I  S  T  K  L  D  P  W  R  S  Y  T  C  L  *  V  Y  V  H  F  T  M  V  H  Y  S   : G  F  N  S  *  D  I  P  R  R  D  G  D  S  V  F  V  L  L  L  C  D  H  H  I  Y  I  N  I  P  S  G  G  E  K  Y  K  C  L  D  H  I  S  R  H  S  S  H  C  Y  S  L  L   : G  Y  N  W  Y  S  I  *  E  L  Y  D  N  M  V  P  Q  E  D  R  S  S  L  C  F  N  V  *  A  L  C  H  C  F  C  Y  P  H  W  Y  L  L  L  *  R  C  F  L  L  R  K  :  F  G  G  I  S  D  H  S  D  W  V  L  C  C  D  V  G  K  N  S  R  K  I  L  *  G  E  Q  L  R  N  T  C  *  K  *  C  P  S  A  A  K  *  G  I  N  T  V  F  E  S  A  R  V  R  L  N  *  F  Y  V  I  F  I  I  F  H  *  T  T  Q  I  L  N  Q  F  I  S  R  K  E  I  I  V  C  *  L  *  R  *  C  F  K  F  I  L  M  Y  Y  I  D  K  N  K  Y  I  K  I  I  *  P   : S  *  K  *  V  K  *  R  N  *  S  *  *  N  L  K  Y  </third_frame>
          </translation>
          <probable_ORFs xmlns="http://www.genomethreader.org/GTH_output/PGL_module/predicted_gene_location/AGS_information/three_phase_translation/probable_ORFs/">
            <orf_entry>
              <id_line>
                <gDNA id="C05HBa0042B19.1" strand="-"/>
                <serials PGL_serial="16" AGS_serial="1" PPS_serial="1"/>
                <orf_info>
                  <exon_boundaries>
                    <exon start="90687" stop="90544"/>
                    <exon start="90352" stop="90194"/>
                    <exon start="89907" stop="89756"/>
                    <exon start="89210" stop="89075"/>
                  </exon_boundaries>
                  <frame>0</frame>
                  <number_coding_nucleotides>588</number_coding_nucleotides>
                  <number_encoded_amino_acids>196</number_encoded_amino_acids>
                </orf_info>
              </id_line>
              <predicted_protein_sequence>AFVLTFYKGPPIINQHLTSTFSSQQNWILGGVILACESMSTSLWYIIQASILKIYQEEMVIVCLYCFFVTIISTLISLVVERNTNAWIIYLDIRLIAILYSGIIGIAFRSCMTTWCLKKTDPLFVSMFKPFAIVFAILIGTFCFRDAFYLGSLVGSVTTVIGFYAVMWGKTQEKYYEGNNLETLAENNVPLLQNEA*</predicted_protein_sequence>
            </orf_entry>
          </probable_ORFs>
        </three_phase_translation>
      </AGS_information>
    </predicted_gene_location>
  </PGL_module>
</GTH_output>
<!--
$ general statistics:
$ 41 chains have been computed
$ 
$ memory statistics:
$ 631680 bytes spliced alignments in total
$ 22 spliced alignments have been stored
$ 28712 bytes was the average size of a spliced alignment
$ 24336 bytes predicted gene locations in total
$ 16 predicted gene locations have been stored
$ 1521 bytes was the average size of a predicted gene location
$ 6 megabytes was the average size of the backtrace matrix
$ 50 backtrace matrices have been allocated
$ 
$ date finished: 2009-01-16 00:04:11
-->
